locus-tag class description DM55_RS00010 IPR023627 Recombination protein RecR DM55_RS00010 IPR023628 Recombination protein RecR, C4-type zinc finger DM55_RS00010 IPR015967 Recombination protein RecR, conserved site DM55_RS00010 IPR000093 DNA recombination protein RecR DM55_RS00010 IPR034137 RecR, TOPRIM domain DM55_RS00010 IPR006171 TOPRIM domain DM55_RS00015 IPR004401 Nucleoid-associated protein YbaB/EbfC family DM55_RS00015 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DM55_RS00020 IPR003593 AAA+ ATPase domain DM55_RS00020 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DM55_RS00020 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV DM55_RS00020 IPR022754 DNA polymerase III, gamma subunit, domain III DM55_RS00020 IPR012763 DNA polymerase III, subunit gamma/ tau DM55_RS00020 IPR021029 DNA polymerase III, tau subunit, domain V DM55_RS00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00020 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily DM55_RS00020 IPR001270 ClpA/B family DM55_RS00025 IPR013766 Thioredoxin domain DM55_RS00025 IPR036249 Thioredoxin-like superfamily DM55_RS00025 IPR005746 Thioredoxin DM55_RS00025 IPR017937 Thioredoxin, conserved site DM55_RS00035 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DM55_RS00035 IPR011129 Cold shock domain DM55_RS00035 IPR012340 Nucleic acid-binding, OB-fold DM55_RS00035 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00035 IPR041703 Transcription termination factor Rho, ATP binding domain DM55_RS00035 IPR011112 Rho termination factor, N-terminal DM55_RS00035 IPR036269 Rho termination factor, N-terminal domain superfamily DM55_RS00035 IPR011113 Rho termination factor, RNA-binding domain DM55_RS00035 IPR003593 AAA+ ATPase domain DM55_RS00035 IPR004665 Transcription termination factor Rho DM55_RS00040 IPR009061 Putative DNA-binding domain superfamily DM55_RS00040 IPR011789 Cu(I)-responsive transcriptional regulator DM55_RS00040 IPR000551 MerR-type HTH domain DM55_RS00045 IPR023721 Multidrug resistance protein MdtD DM55_RS00045 IPR036259 MFS transporter superfamily DM55_RS00045 IPR020846 Major facilitator superfamily domain DM55_RS00045 IPR011701 Major facilitator superfamily DM55_RS00050 IPR024079 Metallopeptidase, catalytic domain superfamily DM55_RS00050 IPR042252 MtfA, N-terminal DM55_RS00050 IPR010384 MtfA family DM55_RS00055 IPR034704 L28p-like DM55_RS00055 IPR002150 Ribosomal protein L31 DM55_RS00055 IPR027493 Ribosomal protein L31 type B DM55_RS00055 IPR042105 Ribosomal protein L31 superfamily DM55_RS00065 IPR002528 Multi antimicrobial extrusion protein DM55_RS00090 IPR004176 Clp, N-terminal DM55_RS00090 IPR036628 Clp, N-terminal domain superfamily DM55_RS00090 IPR001270 ClpA/B family DM55_RS00090 IPR003959 ATPase, AAA-type, core DM55_RS00090 IPR017730 Chaperonin ClpB DM55_RS00090 IPR003593 AAA+ ATPase domain DM55_RS00090 IPR018368 ClpA/B, conserved site 1 DM55_RS00090 IPR028299 ClpA/B, conserved site 2 DM55_RS00090 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00090 IPR041546 ClpA/ClpB, AAA lid domain DM55_RS00090 IPR019489 Clp ATPase, C-terminal DM55_RS00095 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS00095 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS00095 IPR030489 Transcription regulator Rrf2-type, conserved site DM55_RS00095 IPR000944 Transcription regulator Rrf2-type DM55_RS00100 IPR009050 Globin-like superfamily DM55_RS00100 IPR012292 Globin/Protoglobin DM55_RS00100 IPR001486 Truncated hemoglobin DM55_RS00105 IPR003448 Molybdopterin biosynthesis MoaE DM55_RS00105 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily DM55_RS00110 IPR003749 Sulfur carrier ThiS/MoaD-like DM55_RS00110 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DM55_RS00110 IPR012675 Beta-grasp domain superfamily DM55_RS00115 IPR036135 MoeA, N-terminal and linker domain superfamily DM55_RS00115 IPR005110 MoeA, N-terminal and linker domain DM55_RS00115 IPR001453 MoaB/Mog domain DM55_RS00115 IPR036688 MoeA, C-terminal, domain IV superfamily DM55_RS00115 IPR005111 MoeA, C-terminal, domain IV DM55_RS00115 IPR038987 Molybdopterin biosynthesis protein MoeA-like DM55_RS00115 IPR008284 Molybdenum cofactor biosynthesis, conserved site DM55_RS00115 IPR036425 MoaB/Mog-like domain superfamily DM55_RS00120 IPR001926 Pyridoxal-phosphate dependent enzyme DM55_RS00120 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DM55_RS00120 IPR004450 Threonine synthase-like DM55_RS00120 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS00120 IPR029144 Threonine synthase, N-terminal DM55_RS00120 IPR037158 Threonine synthase, N-terminal domain superfamily DM55_RS00125 IPR002912 ACT domain DM55_RS00125 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding DM55_RS00125 IPR036291 NAD(P)-binding domain superfamily DM55_RS00125 IPR001342 Homoserine dehydrogenase, catalytic DM55_RS00125 IPR019811 Homoserine dehydrogenase, conserved site DM55_RS00125 IPR016204 Homoserine dehydrogenase DM55_RS00130 IPR004839 Aminotransferase, class I/classII DM55_RS00130 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS00130 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS00130 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS00140 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase DM55_RS00140 IPR003342 Glycosyl transferase family 39/83 DM55_RS00145 IPR000390 Small multidrug resistance protein family DM55_RS00145 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF DM55_RS00150 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB DM55_RS00150 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DM55_RS00150 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS00150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS00150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS00155 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase DM55_RS00155 IPR001173 Glycosyltransferase 2-like DM55_RS00155 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS00160 IPR036477 Formyl transferase, N-terminal domain superfamily DM55_RS00160 IPR036291 NAD(P)-binding domain superfamily DM55_RS00160 IPR011034 Formyl transferase-like, C-terminal domain superfamily DM55_RS00160 IPR021168 Bifunctional polymyxin resistance protein, ArnA DM55_RS00160 IPR001509 NAD-dependent epimerase/dehydratase DM55_RS00160 IPR002376 Formyl transferase, N-terminal DM55_RS00160 IPR005793 Formyl transferase, C-terminal DM55_RS00165 IPR021168 Bifunctional polymyxin resistance protein, ArnA DM55_RS00165 IPR001509 NAD-dependent epimerase/dehydratase DM55_RS00165 IPR005793 Formyl transferase, C-terminal DM55_RS00165 IPR002376 Formyl transferase, N-terminal DM55_RS00165 IPR036477 Formyl transferase, N-terminal domain superfamily DM55_RS00165 IPR011034 Formyl transferase-like, C-terminal domain superfamily DM55_RS00165 IPR036291 NAD(P)-binding domain superfamily DM55_RS00170 IPR002509 NodB homology domain DM55_RS00170 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DM55_RS00170 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable DM55_RS00175 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DM55_RS00175 IPR024706 Peroxiredoxin, AhpC-type DM55_RS00175 IPR036249 Thioredoxin-like superfamily DM55_RS00175 IPR013766 Thioredoxin domain DM55_RS00180 IPR002716 PIN domain DM55_RS00180 IPR003714 PhoH-like protein DM55_RS00180 IPR029060 PIN-like domain superfamily DM55_RS00180 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00185 IPR038765 Papain-like cysteine peptidase superfamily DM55_RS00185 IPR000064 Endopeptidase, NLPC/P60 domain DM55_RS00190 IPR001204 Phosphate transporter DM55_RS00200 IPR003593 AAA+ ATPase domain DM55_RS00200 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00200 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DM55_RS00200 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily DM55_RS00200 IPR007693 DNA helicase, DnaB-like, N-terminal DM55_RS00200 IPR007694 DNA helicase, DnaB-like, C-terminal DM55_RS00200 IPR007692 DNA helicase, DnaB type DM55_RS00205 IPR000244 Ribosomal protein L9 DM55_RS00205 IPR020594 Ribosomal protein L9, bacteria/chloroplast DM55_RS00205 IPR020069 Ribosomal protein L9, C-terminal DM55_RS00205 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DM55_RS00205 IPR020070 Ribosomal protein L9, N-terminal DM55_RS00205 IPR036935 Ribosomal protein L9, N-terminal domain superfamily DM55_RS00205 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DM55_RS00210 IPR036870 Ribosomal protein S18 superfamily DM55_RS00210 IPR018275 Ribosomal protein S18, conserved site DM55_RS00210 IPR001648 Ribosomal protein S18 DM55_RS00220 IPR020814 Ribosomal protein S6, plastid/chloroplast DM55_RS00220 IPR000529 Ribosomal protein S6 DM55_RS00220 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DM55_RS00220 IPR035980 Ribosomal protein S6 superfamily DM55_RS00230 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS00230 IPR014286 RNA polymerase sigma-70 RpoE type DM55_RS00230 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DM55_RS00230 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site DM55_RS00230 IPR014284 RNA polymerase sigma-70 like domain DM55_RS00230 IPR039425 RNA polymerase sigma-70 like DM55_RS00230 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS00230 IPR013324 RNA polymerase sigma factor, region 3/4-like DM55_RS00230 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS00245 IPR002514 Transposase IS3/IS911family DM55_RS00245 IPR009057 Homeobox-like domain superfamily DM55_RS00250 IPR025948 HTH-like domain DM55_RS00250 IPR001584 Integrase, catalytic core DM55_RS00250 IPR012337 Ribonuclease H-like superfamily DM55_RS00250 IPR036397 Ribonuclease H superfamily DM55_RS00255 IPR012337 Ribonuclease H-like superfamily DM55_RS00255 IPR025948 HTH-like domain DM55_RS00255 IPR001584 Integrase, catalytic core DM55_RS00255 IPR036397 Ribonuclease H superfamily DM55_RS00260 IPR009057 Homeobox-like domain superfamily DM55_RS00260 IPR002514 Transposase IS3/IS911family DM55_RS00265 IPR037152 L-asparaginase, N-terminal domain superfamily DM55_RS00265 IPR027474 L-asparaginase, N-terminal DM55_RS00265 IPR036152 Asparaginase/glutaminase-like superfamily DM55_RS00265 IPR040919 Asparaginase/glutaminase, C-terminal DM55_RS00265 IPR027475 Asparaginase/glutaminase, active site 2 DM55_RS00265 IPR020827 Asparaginase/glutaminase, active site 1 DM55_RS00265 IPR027473 L-asparaginase, C-terminal DM55_RS00265 IPR004550 L-asparaginase, type II DM55_RS00265 IPR006034 Asparaginase/glutaminase-like DM55_RS00290 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA DM55_RS00290 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DM55_RS00290 IPR001296 Glycosyl transferase, family 1 DM55_RS00295 IPR018078 DNA-binding, RecF, conserved site DM55_RS00295 IPR001238 DNA-binding, RecF DM55_RS00295 IPR042174 DNA-binding RecF, domain 2 DM55_RS00295 IPR003395 RecF/RecN/SMC, N-terminal DM55_RS00295 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00315 IPR032466 Metal-dependent hydrolase DM55_RS00315 IPR001130 TatD family DM55_RS00315 IPR018228 Deoxyribonuclease, TatD-related, conserved site DM55_RS00315 IPR015991 Uncharacterised hydrolase TatD-type DM55_RS00320 IPR016181 Acyl-CoA N-acyltransferase DM55_RS00320 IPR000182 GNAT domain DM55_RS00325 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00325 IPR004622 DNA polymerase III, delta prime subunit DM55_RS00325 IPR015199 DNA polymerase III, delta subunit, C-terminal DM55_RS00330 IPR039430 Thymidylate kinase-like domain DM55_RS00330 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00330 IPR018094 Thymidylate kinase DM55_RS00335 IPR003770 Endolytic murein transglycosylase DM55_RS00340 IPR023758 tRNA-modifying protein YgfZ DM55_RS00340 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DM55_RS00340 IPR017703 YgfZ/GcvT conserved site DM55_RS00340 IPR006222 Aminomethyltransferase, folate-binding domain DM55_RS00350 IPR016181 Acyl-CoA N-acyltransferase DM55_RS00350 IPR000182 GNAT domain DM55_RS00350 IPR039143 Glucosamine 6-phosphate N-acetyltransferase DM55_RS00355 IPR029058 Alpha/Beta hydrolase fold DM55_RS00355 IPR013094 Alpha/beta hydrolase fold-3 DM55_RS00360 IPR041694 Oxidoreductase, N-terminal domain DM55_RS00360 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS00360 IPR036291 NAD(P)-binding domain superfamily DM55_RS00360 IPR020843 Polyketide synthase, enoylreductase domain DM55_RS00360 IPR011032 GroES-like superfamily DM55_RS00380 IPR020617 Thiolase, C-terminal DM55_RS00380 IPR002155 Thiolase DM55_RS00380 IPR016039 Thiolase-like DM55_RS00380 IPR020616 Thiolase, N-terminal DM55_RS00380 IPR020615 Thiolase, acyl-enzyme intermediate active site DM55_RS00380 IPR020613 Thiolase, conserved site DM55_RS00380 IPR020610 Thiolase, active site DM55_RS00385 IPR036380 Isochorismatase-like superfamily DM55_RS00385 IPR000868 Isochorismatase-like DM55_RS00390 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS00390 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS00390 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS00390 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS00390 IPR001753 Enoyl-CoA hydratase/isomerase DM55_RS00390 IPR012802 Fatty oxidation complex, alpha subunit FadJ DM55_RS00390 IPR036291 NAD(P)-binding domain superfamily DM55_RS00395 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS00395 IPR000873 AMP-dependent synthetase/ligase DM55_RS00395 IPR020845 AMP-binding, conserved site DM55_RS00395 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS00400 IPR003846 Protein adenylyltransferase SelO DM55_RS00405 IPR028427 Peptide methionine sulfoxide reductase DM55_RS00405 IPR002579 Peptide methionine sulphoxide reductase MrsB DM55_RS00405 IPR011057 Mss4-like superfamily DM55_RS00410 IPR006008 Intracellular septation protein A DM55_RS00415 IPR036065 BolA-like superfamily DM55_RS00415 IPR002634 BolA protein DM55_RS00420 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site DM55_RS00420 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DM55_RS00430 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily DM55_RS00430 IPR017926 Glutamine amidotransferase DM55_RS00430 IPR010073 Phosphoribosylformylglycinamidine synthase PurL DM55_RS00430 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain DM55_RS00430 IPR010918 PurM-like, C-terminal domain DM55_RS00430 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal DM55_RS00430 IPR029062 Class I glutamine amidotransferase-like DM55_RS00430 IPR036676 PurM-like, C-terminal domain superfamily DM55_RS00430 IPR036921 PurM-like, N-terminal domain superfamily DM55_RS00440 IPR023080 D-amino acid dehydrogenase DadA DM55_RS00440 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS00440 IPR006076 FAD dependent oxidoreductase DM55_RS00445 IPR029056 Ribokinase-like DM55_RS00445 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase DM55_RS00450 IPR035482 Phosphoglucose isomerase, SIS domain 2 DM55_RS00450 IPR035476 Phosphoglucose isomerase, SIS domain 1 DM55_RS00450 IPR018189 Phosphoglucose isomerase, conserved site DM55_RS00450 IPR023096 Phosphoglucose isomerase, C-terminal DM55_RS00450 IPR001672 Phosphoglucose isomerase (PGI) DM55_RS00455 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00455 IPR017871 ABC transporter, conserved site DM55_RS00455 IPR003439 ABC transporter-like DM55_RS00455 IPR003593 AAA+ ATPase domain DM55_RS00460 IPR013830 SGNH hydrolase-type esterase domain DM55_RS00460 IPR036514 SGNH hydrolase superfamily DM55_RS00465 IPR023059 Foldase protein PrsA DM55_RS00465 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DM55_RS00465 IPR027304 Trigger factor/SurA domain superfamily DM55_RS00465 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site DM55_RS00510 IPR008269 Peptidase S16, Lon proteolytic domain DM55_RS00510 IPR027543 Lon protease, bacterial DM55_RS00510 IPR027065 Lon protease DM55_RS00510 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS00510 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00510 IPR008268 Peptidase S16, active site DM55_RS00510 IPR015947 PUA-like superfamily DM55_RS00510 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS00510 IPR003959 ATPase, AAA-type, core DM55_RS00510 IPR003111 Lon, substrate-binding domain DM55_RS00510 IPR003593 AAA+ ATPase domain DM55_RS00510 IPR004815 Lon protease, bacterial/eukaryotic-type DM55_RS00515 IPR003959 ATPase, AAA-type, core DM55_RS00515 IPR038366 Zinc finger, ClpX C4-type superfamily DM55_RS00515 IPR010603 Zinc finger, ClpX C4-type DM55_RS00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00515 IPR004487 Clp protease, ATP-binding subunit ClpX DM55_RS00515 IPR003593 AAA+ ATPase domain DM55_RS00515 IPR019489 Clp ATPase, C-terminal DM55_RS00520 IPR033135 ClpP, histidine active site DM55_RS00520 IPR018215 ClpP, Ser active site DM55_RS00520 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS00520 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DM55_RS00520 IPR001907 ATP-dependent Clp protease proteolytic subunit DM55_RS00525 IPR037041 Trigger factor, C-terminal domain superfamily DM55_RS00525 IPR036611 Trigger factor ribosome-binding domain superfamily DM55_RS00525 IPR027304 Trigger factor/SurA domain superfamily DM55_RS00525 IPR008881 Trigger factor, ribosome-binding, bacterial DM55_RS00525 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DM55_RS00525 IPR005215 Trigger factor DM55_RS00525 IPR008880 Trigger factor, C-terminal DM55_RS00535 IPR004381 Glycerate kinase DM55_RS00535 IPR018193 Glycerate kinase, flavodoxin-like fold DM55_RS00535 IPR036129 Glycerate kinase superfamily DM55_RS00535 IPR018197 Glycerate kinase, restriction-enzyme-like fold DM55_RS00540 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS00540 IPR023187 Transcriptional regulator MarR-type, conserved site DM55_RS00540 IPR000835 MarR-type HTH domain DM55_RS00540 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS00545 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS00545 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DM55_RS00545 IPR036291 NAD(P)-binding domain superfamily DM55_RS00545 IPR013752 Ketopantoate reductase, C-terminal domain DM55_RS00545 IPR013332 Ketopantoate reductase, N-terminal domain DM55_RS00555 IPR013793 Porin, Gram-negative type, conserved site DM55_RS00555 IPR001702 Porin, Gram-negative type DM55_RS00555 IPR033900 Porin domain, Gram-negative type DM55_RS00555 IPR002299 Porin, Neisseria sp. type DM55_RS00555 IPR023614 Porin domain superfamily DM55_RS00565 IPR000286 Histone deacetylase family DM55_RS00565 IPR037138 Histone deacetylase domain superfamily DM55_RS00565 IPR023801 Histone deacetylase domain DM55_RS00565 IPR023696 Ureohydrolase domain superfamily DM55_RS00585 IPR002514 Transposase IS3/IS911family DM55_RS00585 IPR009057 Homeobox-like domain superfamily DM55_RS00590 IPR000847 Transcription regulator HTH, LysR DM55_RS00590 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS00590 IPR005119 LysR, substrate-binding DM55_RS00590 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain DM55_RS00590 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS00595 IPR003593 AAA+ ATPase domain DM55_RS00595 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal DM55_RS00595 IPR003439 ABC transporter-like DM55_RS00595 IPR017871 ABC transporter, conserved site DM55_RS00595 IPR005666 Sulphate transport system permease protein 1 DM55_RS00595 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS00595 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00595 IPR024765 TOBE-like domain DM55_RS00600 IPR005667 Sulphate ABC transporter permease protein 2 DM55_RS00600 IPR011866 Sulphate ABC transporter, permease protein CysW DM55_RS00600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS00600 IPR035906 MetI-like superfamily DM55_RS00605 IPR011865 Sulphate ABC transporter, permease protein CysT DM55_RS00605 IPR035906 MetI-like superfamily DM55_RS00605 IPR005667 Sulphate ABC transporter permease protein 2 DM55_RS00605 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS00610 IPR005669 Thiosulphate/Sulfate-binding protein DM55_RS00610 IPR000957 Sulphate/thiosulphate-binding, conserved site DM55_RS00610 IPR034408 Sulphate/thiosulphate-binding site DM55_RS00615 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS00615 IPR039418 LexA-like DM55_RS00615 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS00615 IPR015927 Peptidase S24/S26A/S26B/S26C DM55_RS00615 IPR006197 Peptidase S24, LexA-like DM55_RS00615 IPR006199 LexA repressor, DNA-binding domain DM55_RS00615 IPR006200 Transcription regulator LexA DM55_RS00615 IPR036286 LexA/Signal peptidase-like superfamily DM55_RS00635 IPR003439 ABC transporter-like DM55_RS00635 IPR017871 ABC transporter, conserved site DM55_RS00635 IPR015851 ABC transporter, NodI DM55_RS00635 IPR005978 Nodulation ABC transporter, NodI DM55_RS00635 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00635 IPR003593 AAA+ ATPase domain DM55_RS00640 IPR000412 ABC-2 transporter DM55_RS00640 IPR005981 ABC-2 type transporter, NodJ DM55_RS00640 IPR013525 ABC-2 type transporter DM55_RS00650 IPR005524 Predicted permease DUF318 DM55_RS00655 IPR036812 NADP-dependent oxidoreductase domain superfamily DM55_RS00655 IPR020471 Aldo/keto reductase DM55_RS00655 IPR023210 NADP-dependent oxidoreductase domain DM55_RS00665 IPR011991 ArsR-like helix-turn-helix domain DM55_RS00665 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS00665 IPR002577 Helix-turn-helix, HxlR type DM55_RS00665 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS00680 IPR018107 Sodium:dicarboxylate symporter, conserved site DM55_RS00680 IPR023954 C4-dicarboxylate transport protein DM55_RS00680 IPR001991 Sodium:dicarboxylate symporter DM55_RS00680 IPR036458 Sodium:dicarboxylate symporter superfamily DM55_RS00685 IPR018517 tRNA-dihydrouridine synthase, conserved site DM55_RS00685 IPR001269 tRNA-dihydrouridine synthase DM55_RS00685 IPR013785 Aldolase-type TIM barrel DM55_RS00685 IPR004653 tRNA-dihydrouridine(20/20a) synthase DM55_RS00685 IPR035587 DUS-like, FMN-binding domain DM55_RS00695 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS00695 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS00695 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS00705 IPR009057 Homeobox-like domain superfamily DM55_RS00705 IPR002514 Transposase IS3/IS911family DM55_RS00715 IPR008949 Isoprenoid synthase domain superfamily DM55_RS00715 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head DM55_RS00715 IPR019845 Squalene/phytoene synthase, conserved site DM55_RS00715 IPR002060 Squalene/phytoene synthase DM55_RS00735 IPR039420 Transcriptional regulatory protein WalR-like DM55_RS00735 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS00735 IPR001789 Signal transduction response regulator, receiver domain DM55_RS00735 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS00735 IPR001867 OmpR/PhoB-type DNA-binding domain DM55_RS00735 IPR011006 CheY-like superfamily DM55_RS00740 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS00740 IPR003660 HAMP domain DM55_RS00740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS00740 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS00740 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS00740 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS00740 IPR005467 Histidine kinase domain DM55_RS00745 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DM55_RS00745 IPR024706 Peroxiredoxin, AhpC-type DM55_RS00745 IPR036249 Thioredoxin-like superfamily DM55_RS00745 IPR013766 Thioredoxin domain DM55_RS00750 IPR004674 Alkylhydroperoxidase AhpD DM55_RS00750 IPR003779 Carboxymuconolactone decarboxylase-like DM55_RS00750 IPR004675 Alkylhydroperoxidase AhpD core DM55_RS00750 IPR029032 AhpD-like DM55_RS00755 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase DM55_RS00755 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site DM55_RS00755 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily DM55_RS00760 IPR034683 Cytidylyltransferase IspD/TarI DM55_RS00760 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site DM55_RS00760 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DM55_RS00760 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS00765 IPR036101 CarD-like/TRCF domain superfamily DM55_RS00765 IPR014001 Helicase superfamily 1/2, ATP-binding domain DM55_RS00765 IPR003711 CarD-like/TRCF domain DM55_RS00765 IPR011545 DEAD/DEAH box helicase domain DM55_RS00765 IPR001650 Helicase, C-terminal DM55_RS00765 IPR004576 Transcription-repair coupling factor DM55_RS00765 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00765 IPR037235 TRCF-like, C-terminal domain DM55_RS00765 IPR005118 Transcription-repair-coupling factor, C-terminal domain DM55_RS00765 IPR041471 UvrB, interaction domain DM55_RS00775 IPR011650 Peptidase M20, dimerisation domain DM55_RS00775 IPR002933 Peptidase M20 DM55_RS00775 IPR036264 Bacterial exopeptidase dimerisation domain DM55_RS00775 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DM55_RS00775 IPR010169 Acetylornithine deacetylase ArgE DM55_RS00780 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS00780 IPR001926 Pyridoxal-phosphate dependent enzyme DM55_RS00790 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS00790 IPR001264 Glycosyl transferase, family 51 DM55_RS00790 IPR036950 Penicillin binding protein transglycosylase domain DM55_RS00790 IPR023346 Lysozyme-like domain superfamily DM55_RS00790 IPR001460 Penicillin-binding protein, transpeptidase DM55_RS00790 IPR031376 Penicillin-binding protein, OB-like domain DM55_RS00805 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DM55_RS00805 IPR019823 Large-conductance mechanosensitive channel, conserved site DM55_RS00805 IPR036019 Gated mechanosensitive channel DM55_RS00805 IPR001185 Large-conductance mechanosensitive channel DM55_RS00820 IPR007247 Ureidoglycolate lyase DM55_RS00820 IPR011051 RmlC-like cupin domain superfamily DM55_RS00820 IPR023525 Ureidoglycolate lyase, bacterial DM55_RS00820 IPR024060 Ureidoglycolate lyase domain superfamily DM55_RS00825 IPR008979 Galactose-binding-like domain superfamily DM55_RS00825 IPR005164 Allantoicase DM55_RS00825 IPR015908 Allantoicase domain DM55_RS00830 IPR019842 Uricase, conserved site DM55_RS00830 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily DM55_RS00830 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 DM55_RS00830 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase DM55_RS00830 IPR002042 Uricase DM55_RS00840 IPR015942 Asp/Glu/hydantoin racemase DM55_RS00845 IPR001248 Purine-cytosine permease DM55_RS00845 IPR038271 Purine-cytosine permease superfamily DM55_RS00845 IPR012681 Nucleobase cation symporter-1, NCS1 DM55_RS00850 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS00850 IPR000524 Transcription regulator HTH, GntR DM55_RS00850 IPR008920 Transcription regulator FadR/GntR, C-terminal DM55_RS00850 IPR011711 GntR, C-terminal DM55_RS00850 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS00855 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS00855 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS00855 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS00860 IPR040921 LD-carboxypeptidase, C-terminal DM55_RS00860 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal DM55_RS00860 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DM55_RS00860 IPR029062 Class I glutamine amidotransferase-like DM55_RS00860 IPR003507 Peptidase family S66 DM55_RS00860 IPR040449 LD-carboxypeptidase, N-terminal DM55_RS00865 IPR028883 tRNA-specific adenosine deaminase DM55_RS00865 IPR002125 Cytidine and deoxycytidylate deaminase domain DM55_RS00865 IPR016192 APOBEC/CMP deaminase, zinc-binding DM55_RS00865 IPR016193 Cytidine deaminase-like DM55_RS00870 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain DM55_RS00885 IPR022955 GMP synthase DM55_RS00885 IPR022310 NAD/GMP synthase DM55_RS00885 IPR029062 Class I glutamine amidotransferase-like DM55_RS00885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS00885 IPR025777 GMP synthetase ATP pyrophosphatase domain DM55_RS00885 IPR017926 Glutamine amidotransferase DM55_RS00885 IPR001674 GMP synthase, C-terminal DM55_RS00885 IPR004739 GMP synthase, glutamine amidotransferase DM55_RS00895 IPR013785 Aldolase-type TIM barrel DM55_RS00895 IPR000644 CBS domain DM55_RS00895 IPR001093 IMP dehydrogenase/GMP reductase DM55_RS00895 IPR005990 Inosine-5'-monophosphate dehydrogenase DM55_RS00895 IPR015875 IMP dehydrogenase / GMP reductase, conserved site DM55_RS00915 IPR000620 EamA domain DM55_RS00920 IPR033655 RelA, TGS domain DM55_RS00920 IPR037021 RnfH superfamily DM55_RS00920 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DM55_RS00920 IPR005346 RnfH protein DM55_RS00925 IPR005031 Coenzyme Q-binding protein COQ10, START domain DM55_RS00925 IPR023393 START-like domain superfamily DM55_RS00930 IPR023620 Small protein B DM55_RS00930 IPR000037 SsrA-binding protein DM55_RS00930 IPR020081 SsrA-binding protein, conserved site DM55_RS00935 IPR001972 Stomatin family DM55_RS00935 IPR032435 Band 7, C-terminal extension DM55_RS00935 IPR018080 Band 7/stomatin-like, conserved site DM55_RS00935 IPR036013 Band 7/SPFH domain superfamily DM55_RS00935 IPR001107 Band 7 domain DM55_RS00945 IPR008279 PEP-utilising enzyme, mobile domain DM55_RS00945 IPR006319 Phosphoenolpyruvate synthase DM55_RS00945 IPR018274 PEP-utilising enzyme, active site DM55_RS00945 IPR000121 PEP-utilising enzyme, C-terminal DM55_RS00945 IPR023151 PEP-utilising enzyme, conserved site DM55_RS00945 IPR036637 Phosphohistidine domain superfamily DM55_RS00945 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding DM55_RS00945 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DM55_RS00945 IPR040442 Pyruvate kinase-like domain superfamily DM55_RS00945 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS00960 IPR036852 Peptidase S8/S53 domain superfamily DM55_RS00960 IPR000209 Peptidase S8/S53 domain DM55_RS00960 IPR015366 Peptidase S53, activation domain DM55_RS00960 IPR030400 Sedolisin domain DM55_RS00960 IPR023828 Peptidase S8, subtilisin, Ser-active site DM55_RS00965 IPR005177 Bifunctional kinase-pyrophosphorylase DM55_RS00965 IPR026530 Phosphoenolpyruvate synthase regulatory protein DM55_RS00975 IPR002514 Transposase IS3/IS911family DM55_RS00975 IPR009057 Homeobox-like domain superfamily DM55_RS00980 IPR029028 Alpha/beta knot methyltransferases DM55_RS00980 IPR029064 50S ribosomal protein L30e-like DM55_RS00980 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DM55_RS00980 IPR001537 tRNA/rRNA methyltransferase, SpoU type DM55_RS00980 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS00985 IPR001352 Ribonuclease HII/HIII DM55_RS00985 IPR022898 Ribonuclease HII DM55_RS00985 IPR024567 Ribonuclease HII/HIII domain DM55_RS00985 IPR012337 Ribonuclease H-like superfamily DM55_RS00985 IPR036397 Ribonuclease H superfamily DM55_RS00990 IPR003835 Glycosyl transferase, family 19 DM55_RS00995 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal DM55_RS00995 IPR011004 Trimeric LpxA-like superfamily DM55_RS00995 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase DM55_RS00995 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily DM55_RS00995 IPR001451 Hexapeptide repeat DM55_RS01000 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ DM55_RS01000 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ DM55_RS01000 IPR029069 HotDog domain superfamily DM55_RS01005 IPR011004 Trimeric LpxA-like superfamily DM55_RS01005 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD DM55_RS01005 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region DM55_RS01005 IPR018357 Hexapeptide transferase, conserved site DM55_RS01005 IPR001451 Hexapeptide repeat DM55_RS01015 IPR039910 Surface antigen D15-like DM55_RS01015 IPR034746 POTRA domain DM55_RS01015 IPR000184 Bacterial surface antigen (D15) DM55_RS01015 IPR010827 POTRA domain, BamA/TamA-like DM55_RS01015 IPR023707 Outer membrane protein assembly factor BamA DM55_RS01020 IPR041489 PDZ domain 6 DM55_RS01020 IPR001478 PDZ domain DM55_RS01020 IPR036034 PDZ superfamily DM55_RS01020 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase DM55_RS01020 IPR008915 Peptidase M50 DM55_RS01025 IPR026877 DXP reductoisomerase C-terminal domain DM55_RS01025 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal DM55_RS01025 IPR036291 NAD(P)-binding domain superfamily DM55_RS01025 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal DM55_RS01025 IPR036169 DXP reductoisomerase, C-terminal domain superfamily DM55_RS01025 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase DM55_RS01030 IPR000374 Phosphatidate cytidylyltransferase DM55_RS01035 IPR036424 Decaprenyl diphosphate synthase-like superfamily DM55_RS01035 IPR001441 Decaprenyl diphosphate synthase-like DM55_RS01035 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site DM55_RS01040 IPR036191 RRF superfamily DM55_RS01040 IPR002661 Ribosome recycling factor DM55_RS01040 IPR023584 Ribosome recycling factor domain DM55_RS01045 IPR011817 Uridylate kinase DM55_RS01045 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS01045 IPR015963 Uridylate kinase, bacteria DM55_RS01045 IPR036393 Acetylglutamate kinase-like superfamily DM55_RS01050 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation DM55_RS01050 IPR001816 Translation elongation factor EFTs/EF1B DM55_RS01050 IPR036402 Elongation factor Ts, dimerisation domain superfamily DM55_RS01050 IPR018101 Translation elongation factor Ts, conserved site DM55_RS01050 IPR009060 UBA-like superfamily DM55_RS01055 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DM55_RS01055 IPR018130 Ribosomal protein S2, conserved site DM55_RS01055 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid DM55_RS01055 IPR001865 Ribosomal protein S2 DM55_RS01065 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DM55_RS01065 IPR001714 Peptidase M24, methionine aminopeptidase DM55_RS01065 IPR000994 Peptidase M24 DM55_RS01065 IPR036005 Creatinase/aminopeptidase-like DM55_RS01070 IPR003607 HD/PDEase domain DM55_RS01070 IPR002912 ACT domain DM55_RS01070 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme DM55_RS01070 IPR002934 Polymerase, nucleotidyl transferase domain DM55_RS01070 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase DM55_RS01070 IPR006674 HD domain DM55_RS01075 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DM55_RS01075 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DM55_RS01075 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DM55_RS01075 IPR006145 Pseudouridine synthase, RsuA/RluA DM55_RS01075 IPR020103 Pseudouridine synthase, catalytic domain superfamily DM55_RS01075 IPR036986 RNA-binding S4 domain superfamily DM55_RS01075 IPR002942 RNA-binding S4 domain DM55_RS01080 IPR023635 Peptide deformylase DM55_RS01080 IPR036821 Peptide deformylase superfamily DM55_RS01085 IPR004150 NAD-dependent DNA ligase, OB-fold DM55_RS01085 IPR012340 Nucleic acid-binding, OB-fold DM55_RS01085 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DM55_RS01085 IPR013840 NAD-dependent DNA ligase, N-terminal DM55_RS01085 IPR013839 NAD-dependent DNA ligase, adenylation DM55_RS01085 IPR001679 NAD-dependent DNA ligase DM55_RS01085 IPR033136 NAD-dependent DNA ligase, conserved site DM55_RS01085 IPR018239 NAD-dependent DNA ligase, active site DM55_RS01085 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type DM55_RS01085 IPR041663 DisA/LigA, helix-hairpin-helix motif DM55_RS01085 IPR036420 BRCT domain superfamily DM55_RS01085 IPR001357 BRCT domain DM55_RS01085 IPR010994 RuvA domain 2-like DM55_RS01100 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01100 IPR003395 RecF/RecN/SMC, N-terminal DM55_RS01100 IPR024704 Structural maintenance of chromosomes protein DM55_RS01100 IPR010935 SMCs flexible hinge DM55_RS01100 IPR036277 SMCs flexible hinge superfamily DM55_RS01100 IPR011890 Structural maintenance of chromosomes protein, prokaryotic DM55_RS01110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS01110 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS01110 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ DM55_RS01110 IPR004839 Aminotransferase, class I/classII DM55_RS01110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS01115 IPR001451 Hexapeptide repeat DM55_RS01115 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family DM55_RS01115 IPR018357 Hexapeptide transferase, conserved site DM55_RS01115 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 DM55_RS01115 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily DM55_RS01115 IPR011004 Trimeric LpxA-like superfamily DM55_RS01120 IPR036249 Thioredoxin-like superfamily DM55_RS01120 IPR006660 Arsenate reductase-like DM55_RS01120 IPR006504 Transcriptional regulator Spx/MgsR DM55_RS01125 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria DM55_RS01125 IPR011650 Peptidase M20, dimerisation domain DM55_RS01125 IPR002933 Peptidase M20 DM55_RS01125 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DM55_RS01125 IPR036264 Bacterial exopeptidase dimerisation domain DM55_RS01130 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DM55_RS01130 IPR004556 Methyltransferase HemK-like DM55_RS01130 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase DM55_RS01130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS01130 IPR007848 Methyltransferase small domain DM55_RS01140 IPR022924 Cardiolipin synthase DM55_RS01140 IPR001736 Phospholipase D/Transphosphatidylase DM55_RS01140 IPR025202 Phospholipase D-like domain DM55_RS01140 IPR030840 Cardiolipin synthase A DM55_RS01145 IPR036249 Thioredoxin-like superfamily DM55_RS01145 IPR029760 Glutathione peroxidase conserved site DM55_RS01145 IPR000889 Glutathione peroxidase DM55_RS01145 IPR029759 Glutathione peroxidase active site DM55_RS01150 IPR003593 AAA+ ATPase domain DM55_RS01150 IPR003439 ABC transporter-like DM55_RS01150 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01150 IPR032781 ABC-transporter extension domain DM55_RS01150 IPR017871 ABC transporter, conserved site DM55_RS01160 IPR004504 DNA repair protein RadA DM55_RS01160 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01160 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS01160 IPR003593 AAA+ ATPase domain DM55_RS01160 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DM55_RS01160 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS01160 IPR041166 LapB, rubredoxin metal binding domain DM55_RS01165 IPR000821 Alanine racemase DM55_RS01165 IPR011079 Alanine racemase, C-terminal DM55_RS01165 IPR029066 PLP-binding barrel DM55_RS01165 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site DM55_RS01165 IPR001608 Alanine racemase, N-terminal DM55_RS01165 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DM55_RS01170 IPR011701 Major facilitator superfamily DM55_RS01170 IPR036259 MFS transporter superfamily DM55_RS01170 IPR023727 Lysophospholipid transporter LplT DM55_RS01175 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DM55_RS01175 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase DM55_RS01175 IPR029056 Ribokinase-like DM55_RS01185 IPR005273 Uracil-DNA glycosylase family 4 DM55_RS01185 IPR005122 Uracil-DNA glycosylase-like DM55_RS01185 IPR036895 Uracil-DNA glycosylase-like domain superfamily DM55_RS01195 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB DM55_RS01195 IPR000905 Gcp-like domain DM55_RS01205 IPR014014 RNA helicase, DEAD-box type, Q motif DM55_RS01205 IPR014001 Helicase superfamily 1/2, ATP-binding domain DM55_RS01205 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DM55_RS01205 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01205 IPR001650 Helicase, C-terminal DM55_RS01205 IPR011545 DEAD/DEAH box helicase domain DM55_RS01205 IPR028622 ATP-dependent RNA helicase RhlE DM55_RS01215 IPR009057 Homeobox-like domain superfamily DM55_RS01215 IPR002514 Transposase IS3/IS911family DM55_RS01230 IPR040442 Pyruvate kinase-like domain superfamily DM55_RS01230 IPR039556 ICL/PEPM domain DM55_RS01230 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site DM55_RS01230 IPR006254 Isocitrate lyase DM55_RS01230 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DM55_RS01235 IPR006016 UspA DM55_RS01235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01235 IPR006015 Universal stress protein A family DM55_RS01240 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS01240 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS01240 IPR005119 LysR, substrate-binding DM55_RS01240 IPR000847 Transcription regulator HTH, LysR DM55_RS01245 IPR006439 HAD hydrolase, subfamily IA DM55_RS01245 IPR041492 Haloacid dehalogenase-like hydrolase DM55_RS01245 IPR036412 HAD-like superfamily DM55_RS01245 IPR006328 L-2-Haloacid dehalogenase DM55_RS01245 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DM55_RS01245 IPR023214 HAD superfamily DM55_RS01250 IPR011076 Malate synthase-like superfamily DM55_RS01250 IPR019830 Malate synthase, conserved site DM55_RS01250 IPR001465 Malate synthase DM55_RS01250 IPR006252 Malate synthase A DM55_RS01260 IPR010203 Regulator of ribonuclease activity A DM55_RS01260 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DM55_RS01260 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DM55_RS01265 IPR018062 HTH domain AraC-type, conserved site DM55_RS01265 IPR020449 Transcription regulator HTH, AraC- type DM55_RS01265 IPR018060 DNA binding HTH domain, AraC-type DM55_RS01265 IPR014710 RmlC-like jelly roll fold DM55_RS01265 IPR009057 Homeobox-like domain superfamily DM55_RS01265 IPR003313 AraC-type arabinose-binding/dimerisation domain DM55_RS01265 IPR023699 Transcription activator HTH, RhaR DM55_RS01265 IPR037923 Transcription regulator HTH-like DM55_RS01295 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS01295 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 DM55_RS01295 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial DM55_RS01295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01295 IPR033910 Glutamyl-tRNA synthetase DM55_RS01295 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DM55_RS01295 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DM55_RS01295 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding DM55_RS01300 IPR002641 Patatin-like phospholipase domain DM55_RS01300 IPR001423 Lysophospholipase patatin, conserved site DM55_RS01300 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS01305 IPR000064 Endopeptidase, NLPC/P60 domain DM55_RS01305 IPR038765 Papain-like cysteine peptidase superfamily DM55_RS01310 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DM55_RS01310 IPR003593 AAA+ ATPase domain DM55_RS01310 IPR017871 ABC transporter, conserved site DM55_RS01310 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01310 IPR003439 ABC transporter-like DM55_RS01315 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS01315 IPR035906 MetI-like superfamily DM55_RS01315 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DM55_RS01320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS01320 IPR035906 MetI-like superfamily DM55_RS01325 IPR000914 Solute-binding protein family 5 domain DM55_RS01325 IPR039424 Solute-binding protein family 5 DM55_RS01325 IPR030678 Peptide/nickel binding protein, MppA-type DM55_RS01330 IPR036291 NAD(P)-binding domain superfamily DM55_RS01330 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) DM55_RS01330 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS01345 IPR009010 Aspartate decarboxylase-like domain superfamily DM55_RS01345 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DM55_RS01345 IPR006656 Molybdopterin oxidoreductase DM55_RS01345 IPR006657 Molybdopterin dinucleotide-binding domain DM55_RS01350 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS01350 IPR001433 Oxidoreductase FAD/NAD(P)-binding DM55_RS01350 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DM55_RS01350 IPR033892 Ferredoxin--NADP reductase, bacteria DM55_RS01350 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DM55_RS01350 IPR017927 FAD-binding domain, ferredoxin reductase-type DM55_RS01350 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DM55_RS01360 IPR000813 7Fe ferredoxin DM55_RS01360 IPR022569 Ferredoxin, C-terminal DM55_RS01360 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS01360 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS01370 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DM55_RS01370 IPR001714 Peptidase M24, methionine aminopeptidase DM55_RS01370 IPR000994 Peptidase M24 DM55_RS01370 IPR036005 Creatinase/aminopeptidase-like DM55_RS01380 IPR009049 Argininosuccinate lyase DM55_RS01380 IPR003806 ATP-grasp fold, PylC-type DM55_RS01380 IPR011761 ATP-grasp fold DM55_RS01380 IPR022761 Fumarate lyase, N-terminal DM55_RS01380 IPR000362 Fumarate lyase family DM55_RS01380 IPR024083 Fumarase/histidase, N-terminal DM55_RS01380 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DM55_RS01380 IPR008948 L-Aspartase-like DM55_RS01385 IPR001926 Pyridoxal-phosphate dependent enzyme DM55_RS01385 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS01390 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01390 IPR011779 Sulphate adenylyltransferase, large subunit DM55_RS01390 IPR000795 Transcription factor, GTP-binding domain DM55_RS01390 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS01390 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DM55_RS01390 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain DM55_RS01390 IPR002891 Adenylyl-sulfate kinase DM55_RS01395 IPR011784 Sulphate adenylyltransferase, small subunit DM55_RS01395 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01395 IPR002500 Phosphoadenosine phosphosulphate reductase DM55_RS01405 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS01405 IPR000192 Aminotransferase class V domain DM55_RS01405 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS01405 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS01405 IPR022278 Phosphoserine aminotransferase DM55_RS01410 IPR036514 SGNH hydrolase superfamily DM55_RS01410 IPR002656 Acyltransferase 3 DM55_RS01420 IPR033248 Transketolase, C-terminal domain DM55_RS01420 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DM55_RS01420 IPR005475 Transketolase-like, pyrimidine-binding domain DM55_RS01420 IPR029061 Thiamin diphosphate-binding fold DM55_RS01425 IPR033248 Transketolase, C-terminal domain DM55_RS01425 IPR005475 Transketolase-like, pyrimidine-binding domain DM55_RS01425 IPR033247 Transketolase family DM55_RS01425 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DM55_RS01425 IPR029061 Thiamin diphosphate-binding fold DM55_RS01425 IPR020826 Transketolase binding site DM55_RS01425 IPR005478 Transketolase, bacterial-like DM55_RS01425 IPR005474 Transketolase, N-terminal DM55_RS01445 IPR006189 CHASE domain DM55_RS01445 IPR003819 TauD/TfdA-like domain DM55_RS01445 IPR042098 Taurine dioxygenase TauD-like superfamily DM55_RS01455 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DM55_RS01455 IPR001242 Condensation domain DM55_RS01455 IPR010060 Non-ribosomal peptide synthase DM55_RS01455 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS01455 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS01455 IPR000873 AMP-dependent synthetase/ligase DM55_RS01455 IPR020845 AMP-binding, conserved site DM55_RS01455 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS01455 IPR036736 ACP-like superfamily DM55_RS01455 IPR010071 Amino acid adenylation domain DM55_RS01455 IPR009081 Phosphopantetheine binding ACP domain DM55_RS01455 IPR006162 Phosphopantetheine attachment site DM55_RS01460 IPR001242 Condensation domain DM55_RS01460 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DM55_RS01460 IPR009081 Phosphopantetheine binding ACP domain DM55_RS01460 IPR010060 Non-ribosomal peptide synthase DM55_RS01460 IPR010071 Amino acid adenylation domain DM55_RS01460 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS01460 IPR000873 AMP-dependent synthetase/ligase DM55_RS01460 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS01460 IPR020845 AMP-binding, conserved site DM55_RS01460 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS01460 IPR036736 ACP-like superfamily DM55_RS01460 IPR006162 Phosphopantetheine attachment site DM55_RS01475 IPR001031 Thioesterase DM55_RS01475 IPR020802 Polyketide synthase, thioesterase domain DM55_RS01475 IPR009081 Phosphopantetheine binding ACP domain DM55_RS01475 IPR020845 AMP-binding, conserved site DM55_RS01475 IPR001242 Condensation domain DM55_RS01475 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DM55_RS01475 IPR010071 Amino acid adenylation domain DM55_RS01475 IPR029058 Alpha/Beta hydrolase fold DM55_RS01475 IPR036736 ACP-like superfamily DM55_RS01475 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS01475 IPR000873 AMP-dependent synthetase/ligase DM55_RS01475 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS01475 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS01480 IPR002891 Adenylyl-sulfate kinase DM55_RS01480 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain DM55_RS01480 IPR031157 Tr-type G domain, conserved site DM55_RS01480 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01480 IPR011779 Sulphate adenylyltransferase, large subunit DM55_RS01480 IPR000795 Transcription factor, GTP-binding domain DM55_RS01480 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DM55_RS01480 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS01485 IPR022824 Multidrug resistance protein MdtA DM55_RS01485 IPR039562 Membrane fusion protein, biotin-lipoyl like domain DM55_RS01485 IPR006143 RND efflux pump, membrane fusion protein DM55_RS01490 IPR022831 Multidrug resistance protein MdtB DM55_RS01490 IPR001036 Acriflavin resistance protein DM55_RS01490 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DM55_RS01515 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS01515 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS01515 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS01525 IPR036393 Acetylglutamate kinase-like superfamily DM55_RS01525 IPR041740 Aspartokinase catalytic domain DM55_RS01525 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS01525 IPR002912 ACT domain DM55_RS01525 IPR005260 Aspartate kinase, monofunctional class DM55_RS01525 IPR001341 Aspartate kinase DM55_RS01525 IPR018042 Aspartate kinase, conserved site DM55_RS01525 IPR027795 CASTOR, ACT domain DM55_RS01530 IPR012094 tRNA(Ile)-lysidine synthase DM55_RS01530 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain DM55_RS01530 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal DM55_RS01530 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01530 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal DM55_RS01530 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal DM55_RS01535 IPR001095 Acetyl-CoA carboxylase, alpha subunit DM55_RS01535 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS01535 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal DM55_RS01545 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR DM55_RS01545 IPR032678 tRNA synthetases class I, catalytic domain DM55_RS01545 IPR015803 Cysteine-tRNA ligase DM55_RS01545 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase DM55_RS01545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01545 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DM55_RS01555 IPR029000 Cyclophilin-like domain superfamily DM55_RS01555 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DM55_RS01555 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DM55_RS01560 IPR029000 Cyclophilin-like domain superfamily DM55_RS01560 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DM55_RS01560 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DM55_RS01560 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase DM55_RS01565 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DM55_RS01565 IPR010138 UDP-2,3-diacylglucosamine hydrolase DM55_RS01570 IPR001451 Hexapeptide repeat DM55_RS01570 IPR011004 Trimeric LpxA-like superfamily DM55_RS01570 IPR018357 Hexapeptide transferase, conserved site DM55_RS01570 IPR042122 Serine acetyltransferase, N-terminal domain superfamily DM55_RS01570 IPR005881 Serine O-acetyltransferase DM55_RS01575 IPR004384 RNA methyltransferase TrmJ/LasT DM55_RS01575 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS01575 IPR029028 Alpha/beta knot methyltransferases DM55_RS01575 IPR001537 tRNA/rRNA methyltransferase, SpoU type DM55_RS01580 IPR033942 Inositol monophosphatase DM55_RS01580 IPR020583 Inositol monophosphatase, metal-binding site DM55_RS01580 IPR022337 Inositol monophosphatase, SuhB DM55_RS01580 IPR020550 Inositol monophosphatase, conserved site DM55_RS01580 IPR000760 Inositol monophosphatase-like DM55_RS01595 IPR017261 DNA mismatch repair protein MutS/MSH DM55_RS01595 IPR007861 DNA mismatch repair protein MutS, clamp DM55_RS01595 IPR007695 DNA mismatch repair protein MutS-like, N-terminal DM55_RS01595 IPR007696 DNA mismatch repair protein MutS, core DM55_RS01595 IPR000432 DNA mismatch repair protein MutS, C-terminal DM55_RS01595 IPR016151 DNA mismatch repair protein MutS, N-terminal DM55_RS01595 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01595 IPR036678 MutS, connector domain superfamily DM55_RS01595 IPR007860 DNA mismatch repair protein MutS, connector domain DM55_RS01595 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DM55_RS01595 IPR005748 DNA mismatch repair protein MutS DM55_RS01610 IPR039994 JmjC domain-containing DM55_RS01610 IPR003347 JmjC domain DM55_RS01620 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DM55_RS01620 IPR022712 Beta-Casp domain DM55_RS01620 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DM55_RS01620 IPR001279 Metallo-beta-lactamase DM55_RS01625 IPR014524 Outer membrane protein assembly factor BamC DM55_RS01625 IPR010653 NlpB/DapX lipoprotein DM55_RS01625 IPR042268 Outer membrane protein assembly factor BamC, C-terminal DM55_RS01630 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA DM55_RS01630 IPR013785 Aldolase-type TIM barrel DM55_RS01630 IPR020625 Schiff base-forming aldolase, active site DM55_RS01630 IPR002220 DapA-like DM55_RS01640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01640 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS01640 IPR002306 Tryptophan-tRNA ligase DM55_RS01640 IPR002305 Aminoacyl-tRNA synthetase, class Ic DM55_RS01645 IPR008915 Peptidase M50 DM55_RS01650 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DM55_RS01650 IPR006070 YrdC-like domain DM55_RS01655 IPR003141 Polymerase/histidinol phosphatase, N-terminal DM55_RS01655 IPR016195 Polymerase/histidinol phosphatase-like DM55_RS01655 IPR004013 PHP domain DM55_RS01660 IPR000639 Epoxide hydrolase-like DM55_RS01660 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS01660 IPR029058 Alpha/Beta hydrolase fold DM55_RS01665 IPR009078 Ferritin-like superfamily DM55_RS01665 IPR011197 Uncharacterised conserved protein UCP012318 DM55_RS01665 IPR007402 Protein of unknown function DUF455 DM55_RS01670 IPR011004 Trimeric LpxA-like superfamily DM55_RS01670 IPR001451 Hexapeptide repeat DM55_RS01675 IPR000397 Heat shock protein Hsp33 DM55_RS01675 IPR016153 Heat shock protein Hsp33, N-terminal DM55_RS01675 IPR016154 Heat shock protein Hsp33, C-terminal DM55_RS01675 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily DM55_RS01685 IPR007060 Septum formation initiator FtsL/DivIC DM55_RS01685 IPR023081 Cell division protein FtsB DM55_RS01690 IPR020810 Enolase, C-terminal TIM barrel domain DM55_RS01690 IPR020809 Enolase, conserved site DM55_RS01690 IPR029017 Enolase-like, N-terminal DM55_RS01690 IPR000941 Enolase DM55_RS01690 IPR020811 Enolase, N-terminal DM55_RS01690 IPR036849 Enolase-like, C-terminal domain superfamily DM55_RS01695 IPR006269 3-deoxy-8-phosphooctulonate synthase DM55_RS01695 IPR006218 DAHP synthetase I/KDSA DM55_RS01695 IPR013785 Aldolase-type TIM barrel DM55_RS01700 IPR017926 Glutamine amidotransferase DM55_RS01700 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01700 IPR004468 CTP synthase DM55_RS01700 IPR029062 Class I glutamine amidotransferase-like DM55_RS01700 IPR033828 CTP synthase GATase domain DM55_RS01700 IPR017456 CTP synthase, N-terminal DM55_RS01710 IPR035681 ComA-like, MBL domain DM55_RS01710 IPR004477 ComEC/Rec2-related protein DM55_RS01710 IPR004797 Competence protein ComEC/Rec2 DM55_RS01710 IPR001279 Metallo-beta-lactamase DM55_RS01710 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DM55_RS01715 IPR001130 TatD family DM55_RS01715 IPR032466 Metal-dependent hydrolase DM55_RS01715 IPR018228 Deoxyribonuclease, TatD-related, conserved site DM55_RS01720 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01720 IPR011924 Lipoprotein releasing system, ATP-binding protein DM55_RS01720 IPR015854 ABC transporter, lipoprotein release, LolD DM55_RS01720 IPR017871 ABC transporter, conserved site DM55_RS01720 IPR003439 ABC transporter-like DM55_RS01720 IPR003593 AAA+ ATPase domain DM55_RS01725 IPR025857 MacB-like periplasmic core domain DM55_RS01725 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E DM55_RS01725 IPR003838 ABC transporter permease protein domain DM55_RS01735 IPR004610 Bacterial RecJ exonuclease DM55_RS01735 IPR003156 DHHA1 domain DM55_RS01735 IPR041122 RecJ, OB domain DM55_RS01735 IPR001667 DDH domain DM55_RS01735 IPR038763 DHH phosphoesterase superfamily DM55_RS01740 IPR004374 Peptide chain release factor 2 DM55_RS01740 IPR000352 Peptide chain release factor class I DM55_RS01740 IPR005139 Peptide chain release factor DM55_RS01745 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DM55_RS01745 IPR012340 Nucleic acid-binding, OB-fold DM55_RS01745 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal DM55_RS01745 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DM55_RS01745 IPR006195 Aminoacyl-tRNA synthetase, class II DM55_RS01745 IPR002313 Lysine-tRNA ligase, class II DM55_RS01755 IPR007479 ISC system FeS cluster assembly, IscX DM55_RS01755 IPR036762 IscX-like superfamily DM55_RS01760 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria DM55_RS01760 IPR018298 Adrenodoxin, iron-sulphur binding site DM55_RS01760 IPR012675 Beta-grasp domain superfamily DM55_RS01760 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DM55_RS01760 IPR001055 Adrenodoxin DM55_RS01760 IPR036010 2Fe-2S ferredoxin-like superfamily DM55_RS01765 IPR010236 ISC system FeS cluster assembly, HscA chaperone DM55_RS01765 IPR018181 Heat shock protein 70, conserved site DM55_RS01765 IPR042039 HscA chaperone, nucleotide-binding domain DM55_RS01765 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily DM55_RS01765 IPR013126 Heat shock protein 70 family DM55_RS01765 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily DM55_RS01770 IPR001623 DnaJ domain DM55_RS01770 IPR036869 Chaperone J-domain superfamily DM55_RS01770 IPR004640 Co-chaperone Hsc20 DM55_RS01770 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain DM55_RS01770 IPR036386 HscB, C-terminal domain superfamily DM55_RS01775 IPR016092 FeS cluster insertion protein DM55_RS01775 IPR017870 FeS cluster insertion, C-terminal, conserved site DM55_RS01775 IPR035903 HesB-like domain superfamily DM55_RS01775 IPR011302 Iron-binding protein IscA, proteobacteria DM55_RS01775 IPR000361 FeS cluster biogenesis DM55_RS01780 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal DM55_RS01780 IPR011339 ISC system FeS cluster assembly, IscU scaffold DM55_RS01785 IPR000192 Aminotransferase class V domain DM55_RS01785 IPR016454 Cysteine desulfurase DM55_RS01785 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS01785 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS01785 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS01785 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DM55_RS01785 IPR010240 Cysteine desulfurase IscS DM55_RS01790 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS01790 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS01790 IPR000944 Transcription regulator Rrf2-type DM55_RS01790 IPR030489 Transcription regulator Rrf2-type, conserved site DM55_RS01790 IPR010242 Transcription factor HTH, IscR DM55_RS01795 IPR023485 Phosphotyrosine protein phosphatase I DM55_RS01795 IPR036196 Phosphotyrosine protein phosphatase I superfamily DM55_RS01795 IPR017867 Protein-tyrosine phosphatase, low molecular weight DM55_RS01805 IPR037171 NagB/RpiA transferase-like DM55_RS01805 IPR003741 LUD domain DM55_RS01805 IPR022825 Lactate utilization protein B DM55_RS01805 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DM55_RS01805 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS01805 IPR004452 4Fe-4S binding protein DM55_RS01805 IPR024569 4Fe-4S binding protein, C-terminal DM55_RS01805 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS01805 IPR009051 Alpha-helical ferredoxin DM55_RS01810 IPR004017 Cysteine-rich domain DM55_RS01810 IPR022822 Lactate utilization protein A DM55_RS01815 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS01815 IPR014757 Transcription regulator IclR, C-terminal DM55_RS01815 IPR005471 Transcription regulator IclR, N-terminal DM55_RS01815 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS01815 IPR029016 GAF-like domain superfamily DM55_RS01825 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase DM55_RS01830 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DM55_RS01835 IPR020891 Uncharacterised protein family UPF0758, conserved site DM55_RS01835 IPR010994 RuvA domain 2-like DM55_RS01835 IPR025657 RadC-like JAB domain DM55_RS01835 IPR037518 MPN domain DM55_RS01835 IPR001405 Uncharacterised protein family UPF0758 DM55_RS01840 IPR001383 Ribosomal protein L28 DM55_RS01840 IPR026569 Ribosomal protein L28/L24 DM55_RS01840 IPR034704 L28p-like DM55_RS01840 IPR037147 Ribosomal protein L28/L24 superfamily DM55_RS01845 IPR011332 Zinc-binding ribosomal protein DM55_RS01845 IPR038584 Ribosomal protein L33 superfamily DM55_RS01845 IPR001705 Ribosomal protein L33 DM55_RS01845 IPR018264 Ribosomal protein L33, conserved site DM55_RS01850 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS01850 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily DM55_RS01850 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal DM55_RS01850 IPR005288 L-aspartate oxidase DM55_RS01850 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily DM55_RS01850 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain DM55_RS01855 IPR013785 Aldolase-type TIM barrel DM55_RS01855 IPR004393 Nicotinate-nucleotide pyrophosphorylase DM55_RS01855 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal DM55_RS01855 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD DM55_RS01855 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal DM55_RS01855 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily DM55_RS01855 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal DM55_RS01860 IPR023513 Quinolinate synthase A, type 1 DM55_RS01860 IPR036094 Quinolinate synthetase A superfamily DM55_RS01860 IPR003473 Quinolinate synthetase A DM55_RS01870 IPR010920 LSM domain superfamily DM55_RS01870 IPR006685 Mechanosensitive ion channel MscS DM55_RS01870 IPR023408 Mechanosensitive ion channel MscS domain superfamily DM55_RS01870 IPR025692 Mechanosensitive ion channel inner membrane domain 1 DM55_RS01870 IPR024393 Mechanosensitive ion channel MscS, porin domain DM55_RS01870 IPR006686 Mechanosensitive ion channel MscS, conserved site DM55_RS01870 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DM55_RS01870 IPR011066 Mechanosensitive ion channel MscS, C-terminal DM55_RS01875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS01875 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site DM55_RS01875 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type DM55_RS01875 IPR035926 NusB-like superfamily DM55_RS01875 IPR006027 NusB/RsmB/TIM44 DM55_RS01875 IPR023267 RNA (C5-cytosine) methyltransferase DM55_RS01875 IPR004573 rRNA small subunit methyltransferase B DM55_RS01880 IPR004607 Phosphoribosylglycinamide formyltransferase DM55_RS01880 IPR002376 Formyl transferase, N-terminal DM55_RS01880 IPR036477 Formyl transferase, N-terminal domain superfamily DM55_RS01880 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DM55_RS01885 IPR015864 FAD synthetase DM55_RS01885 IPR023468 Riboflavin kinase DM55_RS01885 IPR002606 Riboflavin kinase, bacterial DM55_RS01885 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic DM55_RS01885 IPR023465 Riboflavin kinase domain superfamily DM55_RS01885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01890 IPR023585 Isoleucine-tRNA ligase, type 1 DM55_RS01890 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain DM55_RS01890 IPR002301 Isoleucine-tRNA ligase DM55_RS01890 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DM55_RS01890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01890 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DM55_RS01890 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DM55_RS01890 IPR010663 Zinc finger, FPG/IleRS-type DM55_RS01890 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS01890 IPR002300 Aminoacyl-tRNA synthetase, class Ia DM55_RS01895 IPR001872 Peptidase A8, signal peptidase II DM55_RS01900 IPR036551 Flavin prenyltransferase-like DM55_RS01900 IPR035929 CoaB-like superfamily DM55_RS01900 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC DM55_RS01900 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal DM55_RS01900 IPR003382 Flavoprotein DM55_RS01905 IPR033704 dUTPase, trimeric DM55_RS01905 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase DM55_RS01905 IPR036157 dUTPase-like superfamily DM55_RS01905 IPR029054 dUTPase-like DM55_RS01920 IPR009057 Homeobox-like domain superfamily DM55_RS01920 IPR002514 Transposase IS3/IS911family DM55_RS01925 IPR025948 HTH-like domain DM55_RS01925 IPR036397 Ribonuclease H superfamily DM55_RS01925 IPR001584 Integrase, catalytic core DM55_RS01925 IPR012337 Ribonuclease H-like superfamily DM55_RS01930 IPR004841 Amino acid permease/ SLC12A domain DM55_RS01930 IPR004840 Amino acid permease, conserved site DM55_RS01935 IPR018368 ClpA/B, conserved site 1 DM55_RS01935 IPR004176 Clp, N-terminal DM55_RS01935 IPR001270 ClpA/B family DM55_RS01935 IPR028299 ClpA/B, conserved site 2 DM55_RS01935 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA DM55_RS01935 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01935 IPR003593 AAA+ ATPase domain DM55_RS01935 IPR041546 ClpA/ClpB, AAA lid domain DM55_RS01935 IPR019489 Clp ATPase, C-terminal DM55_RS01935 IPR036628 Clp, N-terminal domain superfamily DM55_RS01935 IPR003959 ATPase, AAA-type, core DM55_RS01940 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DM55_RS01940 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DM55_RS01940 IPR003769 Adaptor protein ClpS, core DM55_RS01945 IPR025948 HTH-like domain DM55_RS01945 IPR036397 Ribonuclease H superfamily DM55_RS01945 IPR001584 Integrase, catalytic core DM55_RS01945 IPR012337 Ribonuclease H-like superfamily DM55_RS01950 IPR002514 Transposase IS3/IS911family DM55_RS01950 IPR009057 Homeobox-like domain superfamily DM55_RS01955 IPR002059 Cold-shock protein, DNA-binding DM55_RS01955 IPR012340 Nucleic acid-binding, OB-fold DM55_RS01955 IPR019844 Cold-shock (CSD) domain DM55_RS01955 IPR011129 Cold shock domain DM55_RS01955 IPR012156 Cold shock, CspA DM55_RS01965 IPR006259 Adenylate kinase subfamily DM55_RS01965 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01965 IPR007862 Adenylate kinase, active site lid domain DM55_RS01965 IPR033690 Adenylate kinase, conserved site DM55_RS01965 IPR000850 Adenylate kinase/UMP-CMP kinase DM55_RS01970 IPR003329 Acylneuraminate cytidylyltransferase DM55_RS01970 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase DM55_RS01970 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS01975 IPR005735 Zinc finger, LSD1-type DM55_RS01975 IPR005651 Trm112-like DM55_RS01980 IPR003758 Tetraacyldisaccharide 4'-kinase DM55_RS01980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01985 IPR003753 Exonuclease VII, large subunit DM55_RS01985 IPR020579 Exonuclease VII, large subunit, C-terminal DM55_RS01985 IPR025824 OB-fold nucleic acid binding domain DM55_RS01990 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily DM55_RS01990 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily DM55_RS01990 IPR019832 Manganese/iron superoxide dismutase, C-terminal DM55_RS01990 IPR019831 Manganese/iron superoxide dismutase, N-terminal DM55_RS01990 IPR001189 Manganese/iron superoxide dismutase DM55_RS01990 IPR019833 Manganese/iron superoxide dismutase, binding site DM55_RS02000 IPR009057 Homeobox-like domain superfamily DM55_RS02000 IPR002514 Transposase IS3/IS911family DM55_RS02005 IPR012337 Ribonuclease H-like superfamily DM55_RS02005 IPR036397 Ribonuclease H superfamily DM55_RS02005 IPR001584 Integrase, catalytic core DM55_RS02005 IPR025948 HTH-like domain DM55_RS02010 IPR027368 tRNA modification GTPase MnmE domain 2 DM55_RS02010 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DM55_RS02010 IPR005225 Small GTP-binding protein domain DM55_RS02010 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02010 IPR004520 tRNA modification GTPase MnmE DM55_RS02010 IPR006073 GTP binding domain DM55_RS02010 IPR025867 MnmE, helical domain DM55_RS02010 IPR018948 GTP-binding protein TrmE, N-terminal DM55_RS02010 IPR031168 TrmE-type guanine nucleotide-binding domain DM55_RS02020 IPR028055 Membrane insertase YidC/Oxa1, C-terminal DM55_RS02020 IPR038221 YidC, periplasmic domain superfamily DM55_RS02020 IPR028053 Membrane insertase YidC, N-terminal DM55_RS02020 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 DM55_RS02020 IPR019998 Membrane insertase YidC DM55_RS02020 IPR038210 Membrane insertase YidC, periplasmic domain DM55_RS02025 IPR002696 Putative membrane protein insertion efficiency factor DM55_RS02030 IPR020539 Ribonuclease P, conserved site DM55_RS02030 IPR000100 Ribonuclease P DM55_RS02030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS02030 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS02035 IPR020939 Ribosomal protein L34, conserved site DM55_RS02035 IPR000271 Ribosomal protein L34 DM55_RS02040 IPR013159 Chromosomal replication initiator, DnaA C-terminal DM55_RS02040 IPR018312 Chromosomal replication control, initiator DnaA, conserved site DM55_RS02040 IPR001957 Chromosomal replication control, initiator DnaA DM55_RS02040 IPR020591 Chromosomal replication control, initiator DnaA-like DM55_RS02040 IPR024633 DnaA N-terminal domain DM55_RS02040 IPR038454 DnaA, N-terminal domain superfamily DM55_RS02040 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02040 IPR003593 AAA+ ATPase domain DM55_RS02040 IPR010921 Trp repressor/replication initiator DM55_RS02040 IPR013317 Chromosomal replication initiator protein DnaA DM55_RS02045 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal DM55_RS02045 IPR001001 DNA polymerase III, beta sliding clamp DM55_RS02045 IPR022637 DNA polymerase III, beta sliding clamp, central DM55_RS02045 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal DM55_RS02050 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS02050 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS02050 IPR001241 DNA topoisomerase, type IIA DM55_RS02050 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DM55_RS02050 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DM55_RS02050 IPR006171 TOPRIM domain DM55_RS02050 IPR002288 DNA gyrase B subunit, C-terminal DM55_RS02050 IPR011557 DNA gyrase, subunit B DM55_RS02050 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS02050 IPR034160 DNA gyrase subunit B, TOPRIM domain DM55_RS02050 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DM55_RS02050 IPR018522 DNA topoisomerase, type IIA, conserved site DM55_RS02050 IPR041423 DNA gyrase subunit B insert domain DM55_RS02050 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS02055 IPR009057 Homeobox-like domain superfamily DM55_RS02055 IPR002514 Transposase IS3/IS911family DM55_RS02060 IPR036397 Ribonuclease H superfamily DM55_RS02060 IPR001584 Integrase, catalytic core DM55_RS02060 IPR012337 Ribonuclease H-like superfamily DM55_RS02060 IPR025948 HTH-like domain DM55_RS02065 IPR029032 AhpD-like DM55_RS02065 IPR003779 Carboxymuconolactone decarboxylase-like DM55_RS02065 IPR004675 Alkylhydroperoxidase AhpD core DM55_RS02110 IPR017441 Protein kinase, ATP binding site DM55_RS02110 IPR000719 Protein kinase domain DM55_RS02110 IPR011009 Protein kinase-like domain superfamily DM55_RS02110 IPR008271 Serine/threonine-protein kinase, active site DM55_RS02130 IPR001303 Class II aldolase/adducin N-terminal DM55_RS02130 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DM55_RS02135 IPR029787 Nucleotide cyclase DM55_RS02135 IPR000014 PAS domain DM55_RS02135 IPR000160 GGDEF domain DM55_RS02135 IPR035919 EAL domain superfamily DM55_RS02135 IPR001633 EAL domain DM55_RS02135 IPR013656 PAS fold-4 DM55_RS02135 IPR035965 PAS domain superfamily DM55_RS02150 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase DM55_RS02150 IPR011051 RmlC-like cupin domain superfamily DM55_RS02150 IPR014710 RmlC-like jelly roll fold DM55_RS02150 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS02150 IPR005835 Nucleotidyl transferase domain DM55_RS02150 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal DM55_RS02160 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DM55_RS02160 IPR001296 Glycosyl transferase, family 1 DM55_RS02160 IPR017814 Mycothiol biosynthesis protein, MshA DM55_RS02170 IPR009057 Homeobox-like domain superfamily DM55_RS02170 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS02170 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS02170 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS02170 IPR001789 Signal transduction response regulator, receiver domain DM55_RS02170 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02170 IPR011006 CheY-like superfamily DM55_RS02170 IPR002197 DNA binding HTH domain, Fis-type DM55_RS02170 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DM55_RS02170 IPR003593 AAA+ ATPase domain DM55_RS02200 IPR009081 Phosphopantetheine binding ACP domain DM55_RS02200 IPR036736 ACP-like superfamily DM55_RS02215 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ DM55_RS02215 IPR003362 Bacterial sugar transferase DM55_RS02215 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DM55_RS02220 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain DM55_RS02220 IPR003715 Polysaccharide export protein DM55_RS02220 IPR019554 Soluble ligand binding domain DM55_RS02225 IPR001296 Glycosyl transferase, family 1 DM55_RS02225 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DM55_RS02240 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS02240 IPR020843 Polyketide synthase, enoylreductase domain DM55_RS02240 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DM55_RS02240 IPR036291 NAD(P)-binding domain superfamily DM55_RS02240 IPR011032 GroES-like superfamily DM55_RS02240 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DM55_RS02240 IPR013154 Alcohol dehydrogenase, N-terminal DM55_RS02245 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS02245 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS02245 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS02250 IPR009594 Transcription regulator HTH, AraC, N-terminal DM55_RS02250 IPR018060 DNA binding HTH domain, AraC-type DM55_RS02250 IPR009057 Homeobox-like domain superfamily DM55_RS02260 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 DM55_RS02260 IPR011701 Major facilitator superfamily DM55_RS02260 IPR036259 MFS transporter superfamily DM55_RS02270 IPR008220 Homoserine/serine acetyltransferase MetX-like DM55_RS02270 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS02270 IPR029058 Alpha/Beta hydrolase fold DM55_RS02275 IPR023769 Nucleoid occlusion factor SlmA DM55_RS02275 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS02275 IPR009057 Homeobox-like domain superfamily DM55_RS02285 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS02285 IPR041727 N-Acetyl-L-glutamate kinase, cyclic DM55_RS02285 IPR036393 Acetylglutamate kinase-like superfamily DM55_RS02285 IPR004662 Acetylglutamate kinase family DM55_RS02285 IPR037528 Acetylglutamate kinase ArgB DM55_RS02295 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS02295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS02295 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS02295 IPR005467 Histidine kinase domain DM55_RS02295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS02295 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS02300 IPR011006 CheY-like superfamily DM55_RS02300 IPR001789 Signal transduction response regulator, receiver domain DM55_RS02305 IPR003959 ATPase, AAA-type, core DM55_RS02305 IPR003593 AAA+ ATPase domain DM55_RS02305 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02305 IPR019489 Clp ATPase, C-terminal DM55_RS02305 IPR004491 Heat shock protein HslU DM55_RS02310 IPR023333 Proteasome B-type subunit DM55_RS02310 IPR001353 Proteasome, subunit alpha/beta DM55_RS02310 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS02310 IPR022281 ATP-dependent protease, HslV subunit DM55_RS02315 IPR037187 DksA, N-terminal domain superfamily DM55_RS02315 IPR012784 RNA polymerase-binding transcription factor DksA DM55_RS02315 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DM55_RS02315 IPR000962 Zinc finger, DksA/TraR C4-type DM55_RS02320 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DM55_RS02320 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DM55_RS02320 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02320 IPR036627 CobW-like, C-terminal domain superfamily DM55_RS02325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS02325 IPR023542 rRNA large subunit methyltransferase I DM55_RS02325 IPR041532 RlmI, PUA-like domain DM55_RS02325 IPR036974 PUA domain superfamily DM55_RS02325 IPR015947 PUA-like superfamily DM55_RS02325 IPR002478 PUA domain DM55_RS02325 IPR019614 S-adenosylmethionine-dependent methyltransferase DM55_RS02330 IPR004107 Integrase, SAM-like, N-terminal DM55_RS02330 IPR023009 Tyrosine recombinase XerC/XerD DM55_RS02330 IPR010998 Integrase/recombinase, N-terminal DM55_RS02330 IPR002104 Integrase, catalytic domain DM55_RS02330 IPR011931 Tyrosine recombinase XerC DM55_RS02330 IPR011010 DNA breaking-rejoining enzyme, catalytic core DM55_RS02330 IPR013762 Integrase-like, catalytic domain superfamily DM55_RS02340 IPR018510 Diaminopimelate epimerase, active site DM55_RS02340 IPR001653 Diaminopimelate epimerase, DapF DM55_RS02345 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase DM55_RS02345 IPR004960 Bacterial lipid A biosynthesis acyltransferase DM55_RS02350 IPR002133 S-adenosylmethionine synthetase DM55_RS02350 IPR022631 S-adenosylmethionine synthetase, conserved site DM55_RS02350 IPR022628 S-adenosylmethionine synthetase, N-terminal DM55_RS02350 IPR022630 S-adenosylmethionine synthetase, C-terminal DM55_RS02350 IPR022636 S-adenosylmethionine synthetase superfamily DM55_RS02350 IPR022629 S-adenosylmethionine synthetase, central domain DM55_RS02370 IPR023210 NADP-dependent oxidoreductase domain DM55_RS02370 IPR036812 NADP-dependent oxidoreductase domain superfamily DM55_RS02385 IPR011701 Major facilitator superfamily DM55_RS02385 IPR020846 Major facilitator superfamily domain DM55_RS02385 IPR036259 MFS transporter superfamily DM55_RS02395 IPR032882 SrkA/RdoA protein kinase DM55_RS02395 IPR011009 Protein kinase-like domain superfamily DM55_RS02395 IPR002575 Aminoglycoside phosphotransferase DM55_RS02405 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS02405 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS02405 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS02405 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent DM55_RS02405 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS02405 IPR015590 Aldehyde dehydrogenase domain DM55_RS02415 IPR027424 Glucose Oxidase, domain 2 DM55_RS02415 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS02415 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal DM55_RS02415 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal DM55_RS02415 IPR012132 Glucose-methanol-choline oxidoreductase DM55_RS02430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02430 IPR040627 T3SS EscN ATPase, C-terminal DM55_RS02430 IPR005714 ATPase, type III secretion system, FliI/YscN DM55_RS02430 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DM55_RS02430 IPR020005 Flagellar export ATPase FliI, clade 1 DM55_RS02430 IPR003593 AAA+ ATPase domain DM55_RS02430 IPR032463 ATPase, type III secretion system, FliI DM55_RS02430 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DM55_RS02440 IPR023087 Flagellar motor switch protein FliG, C-terminal DM55_RS02440 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DM55_RS02440 IPR032779 Flagellar motor switch protein FliG, middle domain DM55_RS02440 IPR011002 Flagellar motor switch protein FliG, alpha-helical DM55_RS02440 IPR000090 Flagellar motor switch protein FliG DM55_RS02445 IPR013556 Flagellar M-ring C-terminal DM55_RS02445 IPR000067 Flagellar M-ring protein FliF DM55_RS02445 IPR006182 Secretory protein YscJ/FliF DM55_RS02450 IPR001624 Flagellar hook-basal body complex protein FliE DM55_RS02455 IPR036584 Flagellar protein FliS superfamily DM55_RS02455 IPR003713 Flagellar protein FliS DM55_RS02470 IPR006135 Type III secretion system substrate exporter DM55_RS02470 IPR006136 Flagellar biosynthetic protein FlhB DM55_RS02470 IPR029025 Type III secretion system substrate exporter, C-terminal DM55_RS02485 IPR004758 Amino acid transporter DM55_RS02485 IPR002293 Amino acid/polyamine transporter I DM55_RS02490 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS02490 IPR011006 CheY-like superfamily DM55_RS02490 IPR001789 Signal transduction response regulator, receiver domain DM55_RS02490 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS02505 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS02505 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DM55_RS02505 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DM55_RS02505 IPR033892 Ferredoxin--NADP reductase, bacteria DM55_RS02505 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DM55_RS02505 IPR001433 Oxidoreductase FAD/NAD(P)-binding DM55_RS02505 IPR017927 FAD-binding domain, ferredoxin reductase-type DM55_RS02510 IPR001123 Amino acid exporter protein, LeuE-type DM55_RS02510 IPR004778 Homoserine/Threonine efflux protein DM55_RS02515 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DM55_RS02515 IPR005135 Endonuclease/exonuclease/phosphatase DM55_RS02530 IPR003593 AAA+ ATPase domain DM55_RS02530 IPR003959 ATPase, AAA-type, core DM55_RS02530 IPR004815 Lon protease, bacterial/eukaryotic-type DM55_RS02530 IPR008269 Peptidase S16, Lon proteolytic domain DM55_RS02530 IPR027065 Lon protease DM55_RS02530 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02530 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS02530 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS02535 IPR030862 L-2-hydroxyglutarate dehydrogenase DM55_RS02535 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS02535 IPR006076 FAD dependent oxidoreductase DM55_RS02540 IPR036369 High potential iron-sulphur protein superfamily DM55_RS02540 IPR006311 Twin-arginine translocation pathway, signal sequence DM55_RS02540 IPR000170 High potential iron-sulphur protein DM55_RS02545 IPR005829 Sugar transporter, conserved site DM55_RS02545 IPR004736 MFS transporter, metabolite:H symporter DM55_RS02545 IPR036259 MFS transporter superfamily DM55_RS02545 IPR020846 Major facilitator superfamily domain DM55_RS02545 IPR011701 Major facilitator superfamily DM55_RS02550 IPR030678 Peptide/nickel binding protein, MppA-type DM55_RS02550 IPR000914 Solute-binding protein family 5 domain DM55_RS02550 IPR023765 Solute-binding protein family 5, conserved site DM55_RS02550 IPR039424 Solute-binding protein family 5 DM55_RS02555 IPR035906 MetI-like superfamily DM55_RS02555 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS02565 IPR003593 AAA+ ATPase domain DM55_RS02565 IPR003439 ABC transporter-like DM55_RS02565 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DM55_RS02565 IPR017871 ABC transporter, conserved site DM55_RS02565 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02570 IPR003593 AAA+ ATPase domain DM55_RS02570 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02570 IPR003439 ABC transporter-like DM55_RS02570 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DM55_RS02570 IPR017871 ABC transporter, conserved site DM55_RS02595 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DM55_RS02595 IPR005501 LamB/YcsF/PxpA-like DM55_RS02600 IPR003778 Carboxyltransferase domain, subdomain A and B DM55_RS02600 IPR029000 Cyclophilin-like domain superfamily DM55_RS02605 IPR010016 KipI family DM55_RS02605 IPR029000 Cyclophilin-like domain superfamily DM55_RS02605 IPR003833 Carboxyltransferase domain, subdomain C and D DM55_RS02615 IPR002698 5-formyltetrahydrofolate cyclo-ligase DM55_RS02615 IPR037171 NagB/RpiA transferase-like DM55_RS02615 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DM55_RS02620 IPR008939 Lytic transglycosylase, superhelical U-shaped DM55_RS02620 IPR000189 Prokaryotic transglycosylase, active site DM55_RS02620 IPR008258 Transglycosylase SLT domain 1 DM55_RS02620 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily DM55_RS02620 IPR023346 Lysozyme-like domain superfamily DM55_RS02620 IPR012289 Lytic transglycosylase, superhelical linker DM55_RS02635 IPR006674 HD domain DM55_RS02635 IPR003607 HD/PDEase domain DM55_RS02635 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain DM55_RS02635 IPR002646 Poly A polymerase, head domain DM55_RS02635 IPR012006 tRNA nucleotidyltransferase, proteobacteria DM55_RS02650 IPR007412 Anti-sigma-28 factor, FlgM DM55_RS02650 IPR031316 Anti-sigma-28 factor FlgM, C-terminal DM55_RS02650 IPR035890 Anti-sigma-28 factor FlgM superfamily DM55_RS02655 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DM55_RS02655 IPR013974 SAF domain DM55_RS02655 IPR041231 FlgA, N-terminal DM55_RS02655 IPR039246 Flagellar protein FlgA DM55_RS02665 IPR006300 Flagellar basal-body rod protein FlgB DM55_RS02665 IPR019776 Flagellar basal body rod protein, conserved site DM55_RS02665 IPR001444 Flagellar basal body rod protein, N-terminal DM55_RS02670 IPR001444 Flagellar basal body rod protein, N-terminal DM55_RS02670 IPR019776 Flagellar basal body rod protein, conserved site DM55_RS02670 IPR006299 Flagellar basal-body rod protein FlgC DM55_RS02670 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DM55_RS02675 IPR025963 FlgD Tudor-like domain DM55_RS02675 IPR005648 Flagellar hook capping protein DM55_RS02675 IPR025965 FlgD Ig-like domain DM55_RS02680 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DM55_RS02680 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DM55_RS02680 IPR001444 Flagellar basal body rod protein, N-terminal DM55_RS02680 IPR037058 Flagellar hook protein FlgE superfamily DM55_RS02680 IPR011491 Flagellar hook protein FlgE DM55_RS02680 IPR019776 Flagellar basal body rod protein, conserved site DM55_RS02680 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DM55_RS02685 IPR001444 Flagellar basal body rod protein, N-terminal DM55_RS02685 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DM55_RS02685 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DM55_RS02685 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DM55_RS02685 IPR019776 Flagellar basal body rod protein, conserved site DM55_RS02690 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DM55_RS02690 IPR001444 Flagellar basal body rod protein, N-terminal DM55_RS02690 IPR019776 Flagellar basal body rod protein, conserved site DM55_RS02690 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DM55_RS02690 IPR012834 Flagellar basal-body rod FlgG DM55_RS02690 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DM55_RS02695 IPR000527 Flagellar L-ring protein DM55_RS02700 IPR001782 Flagellar P-ring protein DM55_RS02705 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain DM55_RS02705 IPR019301 Flagellar protein FlgJ, N-terminal DM55_RS02705 IPR013377 Peptidoglycan hydrolase FlgJ DM55_RS02710 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal DM55_RS02710 IPR023787 Type III secretion system flagellar brake protein YcgR DM55_RS02710 IPR012349 FMN-binding split barrel DM55_RS02710 IPR009875 PilZ domain DM55_RS02715 IPR002371 Flagellar hook-associated protein 1 DM55_RS02715 IPR001444 Flagellar basal body rod protein, N-terminal DM55_RS02715 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DM55_RS02715 IPR019776 Flagellar basal body rod protein, conserved site DM55_RS02720 IPR013384 Flagellar hook-associated protein 3 DM55_RS02720 IPR001029 Flagellin, D0/D1 domain DM55_RS02725 IPR019918 Pyrimidine permease RutG, predicted DM55_RS02725 IPR006043 Xanthine/uracil/vitamin C permease DM55_RS02725 IPR006042 Xanthine/uracil permease DM55_RS02730 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS02730 IPR005119 LysR, substrate-binding DM55_RS02730 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS02730 IPR000847 Transcription regulator HTH, LysR DM55_RS02750 IPR013988 PhnA protein, C-terminal DM55_RS02750 IPR004624 PhnA protein DM55_RS02750 IPR013987 PhnA protein, N-terminal DM55_RS02760 IPR002299 Porin, Neisseria sp. type DM55_RS02760 IPR023614 Porin domain superfamily DM55_RS02760 IPR033900 Porin domain, Gram-negative type DM55_RS02760 IPR001702 Porin, Gram-negative type DM55_RS02785 IPR036397 Ribonuclease H superfamily DM55_RS02785 IPR012337 Ribonuclease H-like superfamily DM55_RS02785 IPR001584 Integrase, catalytic core DM55_RS02785 IPR025948 HTH-like domain DM55_RS02790 IPR009057 Homeobox-like domain superfamily DM55_RS02790 IPR002514 Transposase IS3/IS911family DM55_RS02825 IPR006324 Glutathione-disulphide reductase DM55_RS02825 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DM55_RS02825 IPR023753 FAD/NAD(P)-binding domain DM55_RS02825 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM55_RS02825 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DM55_RS02825 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS02825 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DM55_RS02830 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body DM55_RS02830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS02830 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail DM55_RS02830 IPR018223 Argininosuccinate synthase, conserved site DM55_RS02830 IPR023437 Argininosuccinate synthase, type 2 subfamily DM55_RS02830 IPR001518 Argininosuccinate synthase DM55_RS02855 IPR036412 HAD-like superfamily DM55_RS02855 IPR023214 HAD superfamily DM55_RS02855 IPR009078 Ferritin-like superfamily DM55_RS02855 IPR001757 P-type ATPase DM55_RS02855 IPR011017 TRASH domain DM55_RS02855 IPR007029 YHS domain DM55_RS02855 IPR027256 P-type ATPase, subfamily IB DM55_RS02855 IPR012348 Ribonucleotide reductase-like DM55_RS02855 IPR018303 P-type ATPase, phosphorylation site DM55_RS02855 IPR008250 P-type ATPase, A domain superfamily DM55_RS02855 IPR023298 P-type ATPase, transmembrane domain superfamily DM55_RS02855 IPR023299 P-type ATPase, cytoplasmic domain N DM55_RS02860 IPR007156 LemA DM55_RS02860 IPR023353 LemA-like domain superfamily DM55_RS02865 IPR007621 TPM domain DM55_RS02885 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DM55_RS02885 IPR006143 RND efflux pump, membrane fusion protein DM55_RS02890 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA DM55_RS02890 IPR001036 Acriflavin resistance protein DM55_RS02890 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DM55_RS02910 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS02910 IPR035466 GlmS/AgaS, SIS domain 1 DM55_RS02910 IPR035490 GlmS/FrlB, SIS domain 2 DM55_RS02910 IPR001347 Sugar isomerase (SIS) DM55_RS02910 IPR017932 Glutamine amidotransferase type 2 domain DM55_RS02910 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DM55_RS02915 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase DM55_RS02915 IPR025877 MobA-like NTP transferase DM55_RS02915 IPR011004 Trimeric LpxA-like superfamily DM55_RS02915 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS02915 IPR038009 GlmU, C-terminal LbH domain DM55_RS02915 IPR001451 Hexapeptide repeat DM55_RS02920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS02920 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal DM55_RS02920 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase DM55_RS02950 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DM55_RS02950 IPR011611 Carbohydrate kinase PfkB DM55_RS02950 IPR029056 Ribokinase-like DM55_RS02950 IPR002139 Ribokinase/fructokinase DM55_RS02960 IPR028082 Periplasmic binding protein-like I DM55_RS02960 IPR023588 Transcription regulator HTH, PurR DM55_RS02960 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DM55_RS02960 IPR000843 LacI-type HTH domain DM55_RS02965 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DM55_RS02965 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS02965 IPR003660 HAMP domain DM55_RS02965 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DM55_RS02965 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DM55_RS02965 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS02970 IPR016833 Putative sodium bile acid cotransporter DM55_RS02970 IPR038770 Sodium/solute symporter superfamily DM55_RS02980 IPR023614 Porin domain superfamily DM55_RS02980 IPR002299 Porin, Neisseria sp. type DM55_RS02980 IPR033900 Porin domain, Gram-negative type DM55_RS02980 IPR001702 Porin, Gram-negative type DM55_RS02985 IPR009057 Homeobox-like domain superfamily DM55_RS02985 IPR002514 Transposase IS3/IS911family DM55_RS02990 IPR025948 HTH-like domain DM55_RS02990 IPR001584 Integrase, catalytic core DM55_RS02990 IPR012337 Ribonuclease H-like superfamily DM55_RS02990 IPR036397 Ribonuclease H superfamily DM55_RS03005 IPR017850 Alkaline-phosphatase-like, core domain superfamily DM55_RS03005 IPR001952 Alkaline phosphatase DM55_RS03005 IPR018299 Alkaline phosphatase, active site DM55_RS03010 IPR018299 Alkaline phosphatase, active site DM55_RS03010 IPR001952 Alkaline phosphatase DM55_RS03010 IPR017850 Alkaline-phosphatase-like, core domain superfamily DM55_RS03020 IPR023648 Copper homeostasis CutC domain DM55_RS03020 IPR036822 Copper homeostasis (CutC) domain superfamily DM55_RS03020 IPR005627 Copper homeostasis protein CutC DM55_RS03025 IPR013785 Aldolase-type TIM barrel DM55_RS03025 IPR006638 Elp3/MiaB/NifB DM55_RS03025 IPR010722 Biotin and thiamin synthesis-associated domain DM55_RS03025 IPR007197 Radical SAM DM55_RS03025 IPR024177 Biotin synthase DM55_RS03025 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB DM55_RS03030 IPR004472 Dethiobiotin synthase BioD DM55_RS03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03035 IPR004839 Aminotransferase, class I/classII DM55_RS03035 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type DM55_RS03035 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria DM55_RS03035 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS03035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS03035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS03040 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS03040 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS03040 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS03040 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA DM55_RS03040 IPR005814 Aminotransferase class-III DM55_RS03050 IPR023006 Uncharacterised protein family UPF0225 DM55_RS03050 IPR032710 NTF2-like domain superfamily DM55_RS03060 IPR002155 Thiolase DM55_RS03060 IPR016039 Thiolase-like DM55_RS03060 IPR020615 Thiolase, acyl-enzyme intermediate active site DM55_RS03060 IPR020610 Thiolase, active site DM55_RS03060 IPR020617 Thiolase, C-terminal DM55_RS03060 IPR020616 Thiolase, N-terminal DM55_RS03060 IPR020613 Thiolase, conserved site DM55_RS03065 IPR001765 Carbonic anhydrase DM55_RS03065 IPR036874 Carbonic anhydrase superfamily DM55_RS03065 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site DM55_RS03070 IPR010452 Isocitrate dehydrogenase kinasephosphatase DM55_RS03080 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily DM55_RS03080 IPR003439 ABC transporter-like DM55_RS03080 IPR032781 ABC-transporter extension domain DM55_RS03080 IPR017871 ABC transporter, conserved site DM55_RS03080 IPR032524 ABC transporter Uup, C-terminal DM55_RS03080 IPR003593 AAA+ ATPase domain DM55_RS03080 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03085 IPR000914 Solute-binding protein family 5 domain DM55_RS03085 IPR030678 Peptide/nickel binding protein, MppA-type DM55_RS03085 IPR039424 Solute-binding protein family 5 DM55_RS03085 IPR023765 Solute-binding protein family 5, conserved site DM55_RS03095 IPR036291 NAD(P)-binding domain superfamily DM55_RS03095 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS03095 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS03100 IPR036291 NAD(P)-binding domain superfamily DM55_RS03100 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS03105 IPR013766 Thioredoxin domain DM55_RS03105 IPR017937 Thioredoxin, conserved site DM55_RS03105 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DM55_RS03105 IPR012336 Thioredoxin-like fold DM55_RS03105 IPR036249 Thioredoxin-like superfamily DM55_RS03115 IPR035684 Arginyl-tRNA synthetase, catalytic core domain DM55_RS03115 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily DM55_RS03115 IPR005148 Arginyl tRNA synthetase N-terminal domain DM55_RS03115 IPR001278 Arginine-tRNA ligase DM55_RS03115 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS03115 IPR008909 DALR anticodon binding DM55_RS03115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS03115 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DM55_RS03140 IPR002195 Dihydroorotase, conserved site DM55_RS03140 IPR006680 Amidohydrolase-related DM55_RS03140 IPR004721 Dihydroorotase homodimeric type DM55_RS03140 IPR032466 Metal-dependent hydrolase DM55_RS03145 IPR026869 Putative glutamine amidotransferase type 2 DM55_RS03145 IPR017932 Glutamine amidotransferase type 2 domain DM55_RS03145 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS03155 IPR002068 Alpha crystallin/Hsp20 domain DM55_RS03155 IPR008978 HSP20-like chaperone DM55_RS03155 IPR031107 Small heat shock protein HSP20 DM55_RS03160 IPR002068 Alpha crystallin/Hsp20 domain DM55_RS03160 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain DM55_RS03160 IPR008978 HSP20-like chaperone DM55_RS03165 IPR020818 GroES chaperonin family DM55_RS03165 IPR037124 GroES chaperonin superfamily DM55_RS03165 IPR018369 Chaperonin GroES, conserved site DM55_RS03165 IPR011032 GroES-like superfamily DM55_RS03175 IPR003593 AAA+ ATPase domain DM55_RS03175 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DM55_RS03175 IPR003439 ABC transporter-like DM55_RS03175 IPR017871 ABC transporter, conserved site DM55_RS03175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03180 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DM55_RS03180 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM DM55_RS03180 IPR035906 MetI-like superfamily DM55_RS03180 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS03185 IPR035906 MetI-like superfamily DM55_RS03185 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ DM55_RS03185 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DM55_RS03185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS03190 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DM55_RS03195 IPR033922 NAD(P) binding domain of glutamate dehydrogenase DM55_RS03195 IPR036291 NAD(P)-binding domain superfamily DM55_RS03195 IPR014362 Glutamate dehydrogenase DM55_RS03195 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain DM55_RS03195 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal DM55_RS03195 IPR033524 Leu/Phe/Val dehydrogenases active site DM55_RS03195 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase DM55_RS03200 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS03200 IPR000847 Transcription regulator HTH, LysR DM55_RS03200 IPR005119 LysR, substrate-binding DM55_RS03200 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS03205 IPR004737 Nitrate transporter DM55_RS03205 IPR036259 MFS transporter superfamily DM55_RS03205 IPR020846 Major facilitator superfamily domain DM55_RS03205 IPR011701 Major facilitator superfamily DM55_RS03210 IPR004769 Adenylosuccinate lyase DM55_RS03210 IPR000362 Fumarate lyase family DM55_RS03210 IPR013539 Adenylosuccinate lyase PurB, C-terminal DM55_RS03210 IPR022761 Fumarate lyase, N-terminal DM55_RS03210 IPR008948 L-Aspartase-like DM55_RS03210 IPR020557 Fumarate lyase, conserved site DM55_RS03210 IPR024083 Fumarase/histidase, N-terminal DM55_RS03220 IPR003474 Gluconate transporter DM55_RS03225 IPR031337 KDPG/KHG aldolase, active site 1 DM55_RS03225 IPR013785 Aldolase-type TIM barrel DM55_RS03225 IPR000887 KDPG/KHG aldolase DM55_RS03225 IPR031338 KDPG/KHG aldolase, active site 2 DM55_RS03230 IPR037237 IlvD/EDD, N-terminal domain DM55_RS03230 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site DM55_RS03230 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase DM55_RS03230 IPR042096 Dihydroxy-acid dehydratase, C-terminal DM55_RS03230 IPR004786 6-phosphogluconate dehydratase DM55_RS03235 IPR000281 Helix-turn-helix protein RpiR DM55_RS03235 IPR035472 RpiR-like, SIS domain DM55_RS03235 IPR001347 Sugar isomerase (SIS) DM55_RS03235 IPR009057 Homeobox-like domain superfamily DM55_RS03235 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS03240 IPR005265 Protoporphyrinogen oxidase HemJ-like DM55_RS03245 IPR012134 Glutamate-5-semialdehyde dehydrogenase DM55_RS03245 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site DM55_RS03245 IPR015590 Aldehyde dehydrogenase domain DM55_RS03245 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS03245 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS03245 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS03245 IPR000965 GPR domain DM55_RS03250 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DM55_RS03250 IPR032780 DNA polymerase III subunit delta, C-terminal DM55_RS03250 IPR010372 DNA polymerase III delta, N-terminal DM55_RS03250 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03250 IPR005790 DNA polymerase III, delta subunit DM55_RS03260 IPR025709 Leucyl-tRNA synthetase, editing domain DM55_RS03260 IPR002302 Leucine-tRNA ligase DM55_RS03260 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DM55_RS03260 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS03260 IPR002300 Aminoacyl-tRNA synthetase, class Ia DM55_RS03260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS03260 IPR015413 Methionyl/Leucyl tRNA synthetase DM55_RS03260 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DM55_RS03260 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DM55_RS03265 IPR003400 Biopolymer transport protein ExbD/TolR DM55_RS03270 IPR002898 MotA/TolQ/ExbB proton channel DM55_RS03275 IPR036291 NAD(P)-binding domain superfamily DM55_RS03275 IPR022663 Dihydrodipicolinate reductase, C-terminal DM55_RS03275 IPR000846 Dihydrodipicolinate reductase, N-terminal DM55_RS03275 IPR023940 Dihydrodipicolinate reductase DM55_RS03275 IPR022664 Dihydrodipicolinate reductase, conserved site DM55_RS03280 IPR026592 Outer membrane protein assembly factor BamE DM55_RS03280 IPR037873 BamE-like DM55_RS03280 IPR007450 Lipoprotein SmpA/OmlA DM55_RS03285 IPR002481 Ferric-uptake regulator DM55_RS03285 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS03285 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS03295 IPR008979 Galactose-binding-like domain superfamily DM55_RS03295 IPR015908 Allantoicase domain DM55_RS03295 IPR005164 Allantoicase DM55_RS03300 IPR036458 Sodium:dicarboxylate symporter superfamily DM55_RS03300 IPR001991 Sodium:dicarboxylate symporter DM55_RS03300 IPR018107 Sodium:dicarboxylate symporter, conserved site DM55_RS03300 IPR023954 C4-dicarboxylate transport protein DM55_RS03305 IPR008920 Transcription regulator FadR/GntR, C-terminal DM55_RS03305 IPR000524 Transcription regulator HTH, GntR DM55_RS03305 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS03305 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS03305 IPR011711 GntR, C-terminal DM55_RS03310 IPR005119 LysR, substrate-binding DM55_RS03310 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS03310 IPR000847 Transcription regulator HTH, LysR DM55_RS03310 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain DM55_RS03310 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS03315 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site DM55_RS03315 IPR001765 Carbonic anhydrase DM55_RS03315 IPR036874 Carbonic anhydrase superfamily DM55_RS03320 IPR003712 Cyanate lyase, C-terminal DM55_RS03320 IPR008076 Cyanate hydratase DM55_RS03320 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DM55_RS03320 IPR036581 Cyanate lyase, C-terminal domain superfamily DM55_RS03325 IPR036259 MFS transporter superfamily DM55_RS03325 IPR020846 Major facilitator superfamily domain DM55_RS03325 IPR011701 Major facilitator superfamily DM55_RS03330 IPR036291 NAD(P)-binding domain superfamily DM55_RS03330 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain DM55_RS03330 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I DM55_RS03330 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain DM55_RS03330 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family DM55_RS03330 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site DM55_RS03335 IPR033248 Transketolase, C-terminal domain DM55_RS03335 IPR005474 Transketolase, N-terminal DM55_RS03335 IPR029061 Thiamin diphosphate-binding fold DM55_RS03335 IPR020826 Transketolase binding site DM55_RS03335 IPR033247 Transketolase family DM55_RS03335 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DM55_RS03335 IPR005475 Transketolase-like, pyrimidine-binding domain DM55_RS03335 IPR005478 Transketolase, bacterial-like DM55_RS03340 IPR037163 Spermidine synthase, tetramerisation domain superfamily DM55_RS03340 IPR035246 Spermidine synthase, tetramerisation domain DM55_RS03340 IPR030374 Polyamine biosynthesis domain DM55_RS03340 IPR001045 Spermidine/spermine synthases DM55_RS03340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS03350 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS03350 IPR006700 Ribosomal RNA small subunit methyltransferase E DM55_RS03350 IPR015947 PUA-like superfamily DM55_RS03350 IPR029028 Alpha/beta knot methyltransferases DM55_RS03370 IPR012302 Malic enzyme, NAD-binding DM55_RS03370 IPR002505 Phosphate acetyl/butaryl transferase DM55_RS03370 IPR012301 Malic enzyme, N-terminal domain DM55_RS03370 IPR037062 Malic enzyme, N-terminal domain superfamily DM55_RS03370 IPR036291 NAD(P)-binding domain superfamily DM55_RS03370 IPR042112 Phosphate acetyltransferase, domain 2 DM55_RS03370 IPR042113 Phosphate acetyltransferase, domain 1 DM55_RS03370 IPR015884 Malic enzyme, conserved site DM55_RS03370 IPR012188 NAD(P)-dependent malic enzyme DM55_RS03375 IPR010918 PurM-like, C-terminal domain DM55_RS03375 IPR036921 PurM-like, N-terminal domain superfamily DM55_RS03375 IPR006283 Thiamine-monophosphate kinase DM55_RS03375 IPR016188 PurM-like, N-terminal domain DM55_RS03375 IPR036676 PurM-like, C-terminal domain superfamily DM55_RS03380 IPR026037 Phosphatidylglycerophosphatase A DM55_RS03380 IPR036681 PgpA-like superfamily DM55_RS03380 IPR007686 YutG/PgpA domain DM55_RS03385 IPR008136 CinA, C-terminal DM55_RS03385 IPR036653 CinA-like, C-terminal DM55_RS03390 IPR011060 Ribulose-phosphate binding barrel DM55_RS03390 IPR001754 Orotidine 5'-phosphate decarboxylase domain DM55_RS03390 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 DM55_RS03390 IPR018089 Orotidine 5'-phosphate decarboxylase, active site DM55_RS03390 IPR013785 Aldolase-type TIM barrel DM55_RS03400 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS03400 IPR036291 NAD(P)-binding domain superfamily DM55_RS03400 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS03405 IPR001851 ABC transporter, permease DM55_RS03410 IPR003439 ABC transporter-like DM55_RS03410 IPR017871 ABC transporter, conserved site DM55_RS03410 IPR003593 AAA+ ATPase domain DM55_RS03410 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03410 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG DM55_RS03415 IPR001761 Periplasmic binding protein/LacI sugar binding domain DM55_RS03415 IPR026266 L-arabinose-binding periplasmic protein DM55_RS03415 IPR028082 Periplasmic binding protein-like I DM55_RS03420 IPR036291 NAD(P)-binding domain superfamily DM55_RS03420 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS03420 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS03420 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DM55_RS03430 IPR042258 2-keto-3-deoxy-galactonokinase, N-terminal DM55_RS03430 IPR042257 2-keto-3-deoxy-galactonokinase, C-terminal domain DM55_RS03430 IPR007729 2-keto-3-deoxy-galactonokinase DM55_RS03435 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS03435 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS03435 IPR005471 Transcription regulator IclR, N-terminal DM55_RS03435 IPR014757 Transcription regulator IclR, C-terminal DM55_RS03435 IPR029016 GAF-like domain superfamily DM55_RS03435 IPR011991 ArsR-like helix-turn-helix domain DM55_RS03450 IPR001264 Glycosyl transferase, family 51 DM55_RS03450 IPR023346 Lysozyme-like domain superfamily DM55_RS03450 IPR036950 Penicillin binding protein transglycosylase domain DM55_RS03450 IPR011812 Biosynthetic peptidoglycan transglycosylase DM55_RS03455 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DM55_RS03455 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal DM55_RS03455 IPR011342 Shikimate dehydrogenase DM55_RS03455 IPR036291 NAD(P)-binding domain superfamily DM55_RS03455 IPR022893 Shikimate dehydrogenase family DM55_RS03455 IPR041121 SDH, C-terminal DM55_RS03460 IPR001900 Ribonuclease II/R DM55_RS03460 IPR012340 Nucleic acid-binding, OB-fold DM55_RS03465 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DM55_RS03465 IPR029058 Alpha/Beta hydrolase fold DM55_RS03470 IPR005757 Murein peptide ligase DM55_RS03470 IPR036565 Mur-like, catalytic domain superfamily DM55_RS03470 IPR004101 Mur ligase, C-terminal DM55_RS03470 IPR036615 Mur ligase, C-terminal domain superfamily DM55_RS03470 IPR013221 Mur ligase, central DM55_RS03470 IPR000713 Mur ligase, N-terminal catalytic domain DM55_RS03480 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DM55_RS03480 IPR036249 Thioredoxin-like superfamily DM55_RS03480 IPR013766 Thioredoxin domain DM55_RS03485 IPR036441 Dehydroquinase, class II superfamily DM55_RS03485 IPR018509 Dehydroquinase, class II, conserved site DM55_RS03485 IPR001874 Dehydroquinase, class II DM55_RS03490 IPR011053 Single hybrid motif DM55_RS03490 IPR001249 Acetyl-CoA biotin carboxyl carrier DM55_RS03490 IPR001882 Biotin-binding site DM55_RS03490 IPR000089 Biotin/lipoyl attachment DM55_RS03495 IPR005481 Biotin carboxylase-like, N-terminal domain DM55_RS03495 IPR016185 Pre-ATP-grasp domain superfamily DM55_RS03495 IPR011054 Rudiment single hybrid motif DM55_RS03495 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DM55_RS03495 IPR011761 ATP-grasp fold DM55_RS03495 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase DM55_RS03495 IPR011764 Biotin carboxylation domain DM55_RS03495 IPR005482 Biotin carboxylase, C-terminal DM55_RS03495 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS03500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS03500 IPR004498 Ribosomal protein L11 methyltransferase DM55_RS03510 IPR013740 Redoxin DM55_RS03510 IPR018219 Thiol peroxidase conserved site DM55_RS03510 IPR002065 Thiol peroxidase Tpx DM55_RS03510 IPR013766 Thioredoxin domain DM55_RS03510 IPR036249 Thioredoxin-like superfamily DM55_RS03515 IPR011611 Carbohydrate kinase PfkB DM55_RS03515 IPR029056 Ribokinase-like DM55_RS03515 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DM55_RS03530 IPR009078 Ferritin-like superfamily DM55_RS03530 IPR000358 Ribonucleotide reductase small subunit family DM55_RS03530 IPR033909 Ribonucleotide reductase small subunit DM55_RS03530 IPR012348 Ribonucleotide reductase-like DM55_RS03535 IPR005144 ATP-cone domain DM55_RS03535 IPR013346 Ribonucleotide reductase, class I , alpha subunit DM55_RS03535 IPR000788 Ribonucleotide reductase large subunit, C-terminal DM55_RS03535 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal DM55_RS03535 IPR013509 Ribonucleotide reductase large subunit, N-terminal DM55_RS03535 IPR039718 Ribonucleoside-diphosphate reductase large subunit DM55_RS03540 IPR002502 N-acetylmuramoyl-L-alanine amidase domain DM55_RS03540 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily DM55_RS03550 IPR002541 Cytochrome c assembly protein DM55_RS03555 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DM55_RS03555 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily DM55_RS03555 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03555 IPR003593 AAA+ ATPase domain DM55_RS03555 IPR004125 Signal recognition particle, SRP54 subunit, M-domain DM55_RS03555 IPR013822 Signal recognition particle SRP54, helical bundle DM55_RS03555 IPR004780 Signal recognition particle protein DM55_RS03555 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DM55_RS03555 IPR022941 Signal recognition particle, SRP54 subunit DM55_RS03560 IPR029057 Phosphoribosyltransferase-like DM55_RS03560 IPR005904 Hypoxanthine phosphoribosyl transferase DM55_RS03560 IPR000836 Phosphoribosyltransferase domain DM55_RS03565 IPR002771 Multiple antibiotic resistance (MarC)-related DM55_RS03570 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DM55_RS03570 IPR033730 Prokaryote proline-tRNA ligase core domain DM55_RS03570 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type DM55_RS03570 IPR002316 Proline-tRNA ligase, class IIa DM55_RS03570 IPR036621 Anticodon-binding domain superfamily DM55_RS03570 IPR004154 Anticodon-binding DM55_RS03570 IPR006195 Aminoacyl-tRNA synthetase, class II DM55_RS03570 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DM55_RS03570 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DM55_RS03570 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 DM55_RS03575 IPR020084 NUDIX hydrolase, conserved site DM55_RS03575 IPR000086 NUDIX hydrolase domain DM55_RS03575 IPR015797 NUDIX hydrolase-like domain superfamily DM55_RS03575 IPR022927 RNA pyrophosphohydrolase RppH DM55_RS03575 IPR020476 NUDIX hydrolase DM55_RS03585 IPR036974 PUA domain superfamily DM55_RS03585 IPR002478 PUA domain DM55_RS03585 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS03585 IPR036393 Acetylglutamate kinase-like superfamily DM55_RS03585 IPR041739 Glutamate-5-kinase domain DM55_RS03585 IPR001057 Glutamate/acetylglutamate kinase DM55_RS03585 IPR011529 Glutamate 5-kinase DM55_RS03585 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase DM55_RS03585 IPR019797 Glutamate 5-kinase, conserved site DM55_RS03585 IPR015947 PUA-like superfamily DM55_RS03590 IPR035101 GTP-binding protein, Obg-type DM55_RS03590 IPR031167 OBG-type guanine nucleotide-binding (G) domain DM55_RS03590 IPR014100 GTP-binding protein Obg/CgtA DM55_RS03590 IPR006074 GTP1/OBG, conserved site DM55_RS03590 IPR006169 GTP1/OBG domain DM55_RS03590 IPR036726 GTP1/OBG domain superfamily DM55_RS03590 IPR006073 GTP binding domain DM55_RS03590 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03595 IPR001684 Ribosomal protein L27 DM55_RS03595 IPR018261 Ribosomal protein L27, conserved site DM55_RS03600 IPR036164 L21-like superfamily DM55_RS03600 IPR028909 Ribosomal protein L21-like DM55_RS03600 IPR001787 Ribosomal protein L21 DM55_RS03600 IPR018258 Ribosomal protein L21, conserved site DM55_RS03605 IPR000092 Polyprenyl synthetase DM55_RS03605 IPR033749 Polyprenyl synthetase, conserved site DM55_RS03605 IPR008949 Isoprenoid synthase domain superfamily DM55_RS03620 IPR036397 Ribonuclease H superfamily DM55_RS03620 IPR001584 Integrase, catalytic core DM55_RS03620 IPR012337 Ribonuclease H-like superfamily DM55_RS03620 IPR025948 HTH-like domain DM55_RS03625 IPR009057 Homeobox-like domain superfamily DM55_RS03625 IPR002514 Transposase IS3/IS911family DM55_RS03630 IPR016169 FAD-binding, type PCMH, subdomain 2 DM55_RS03630 IPR036318 FAD-binding, type PCMH-like superfamily DM55_RS03630 IPR002550 CNNM, transmembrane domain DM55_RS03630 IPR000644 CBS domain DM55_RS03630 IPR005170 Transporter-associated domain DM55_RS03635 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03635 IPR001482 Type II/IV secretion system protein DM55_RS03635 IPR037257 General secretory system II, protein E, N-terminal superfamily DM55_RS03635 IPR007831 General secretory system II, protein E, N-terminal DM55_RS03635 IPR042181 Type II secretion system, protein E, N-terminal DM55_RS03635 IPR013374 ATPase, type IV, pilus assembly, PilB DM55_RS03640 IPR003004 GspF/PilC family DM55_RS03640 IPR001992 Type II secretion system conserved site DM55_RS03640 IPR018076 Type II secretion system F domain DM55_RS03640 IPR042094 Type II secretion system F domain superfamily DM55_RS03645 IPR010627 Peptidase A24A, N-terminal DM55_RS03645 IPR000045 Prepilin type IV endopeptidase, peptidase domain DM55_RS03645 IPR014032 Peptidase A24A, prepilin type IV, bacterial DM55_RS03650 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03650 IPR001977 Dephospho-CoA kinase DM55_RS03655 IPR009777 Cell division protein ZapD DM55_RS03655 IPR027462 Z ring-associated protein D, C-terminal DM55_RS03655 IPR036268 ZapD domain superfamily DM55_RS03660 IPR013088 Zinc finger, NHR/GATA-type DM55_RS03660 IPR005584 DNA gyrase inhibitor YacG DM55_RS03665 IPR020084 NUDIX hydrolase, conserved site DM55_RS03665 IPR003561 Mutator MutT DM55_RS03665 IPR020476 NUDIX hydrolase DM55_RS03665 IPR000086 NUDIX hydrolase domain DM55_RS03665 IPR015797 NUDIX hydrolase-like domain superfamily DM55_RS03675 IPR042195 ArgJ beta chain, C-terminal domain DM55_RS03675 IPR016117 ArgJ-like domain superfamily DM55_RS03675 IPR002813 Arginine biosynthesis protein ArgJ DM55_RS03680 IPR036670 SecA, preprotein cross-linking domain superfamily DM55_RS03680 IPR004027 SEC-C motif DM55_RS03680 IPR011116 SecA Wing/Scaffold DM55_RS03680 IPR011130 SecA, preprotein cross-linking domain DM55_RS03680 IPR011115 SecA DEAD-like, N-terminal DM55_RS03680 IPR020937 SecA conserved site DM55_RS03680 IPR000185 Protein translocase subunit SecA DM55_RS03680 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03680 IPR036266 SecA, Wing/Scaffold superfamily DM55_RS03680 IPR014018 SecA motor DEAD DM55_RS03695 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS03695 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase DM55_RS03695 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal DM55_RS03695 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal DM55_RS03700 IPR013766 Thioredoxin domain DM55_RS03700 IPR036249 Thioredoxin-like superfamily DM55_RS03700 IPR013740 Redoxin DM55_RS03700 IPR037944 Peroxiredoxin-5-like DM55_RS03705 IPR000158 Cell division protein FtsZ DM55_RS03705 IPR024757 Cell division protein FtsZ, C-terminal DM55_RS03705 IPR036525 Tubulin/FtsZ, GTPase domain superfamily DM55_RS03705 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain DM55_RS03705 IPR008280 Tubulin/FtsZ, C-terminal DM55_RS03705 IPR003008 Tubulin/FtsZ, GTPase domain DM55_RS03705 IPR020805 Cell division protein FtsZ, conserved site DM55_RS03710 IPR020823 Cell division protein FtsA DM55_RS03710 IPR003494 SHS2 domain inserted in FtsA DM55_RS03715 IPR005548 Cell division protein FtsQ/DivIB DM55_RS03715 IPR013685 POTRA domain, FtsQ-type DM55_RS03715 IPR034746 POTRA domain DM55_RS03715 IPR026579 Cell division protein FtsQ DM55_RS03720 IPR011761 ATP-grasp fold DM55_RS03720 IPR005905 D-alanine--D-alanine ligase DM55_RS03720 IPR011095 D-alanine--D-alanine ligase, C-terminal DM55_RS03720 IPR011127 D-alanine--D-alanine ligase, N-terminal domain DM55_RS03720 IPR016185 Pre-ATP-grasp domain superfamily DM55_RS03720 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS03720 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site DM55_RS03725 IPR036565 Mur-like, catalytic domain superfamily DM55_RS03725 IPR004101 Mur ligase, C-terminal DM55_RS03725 IPR005758 UDP-N-acetylmuramate--L-alanine ligase DM55_RS03725 IPR000713 Mur ligase, N-terminal catalytic domain DM55_RS03725 IPR013221 Mur ligase, central DM55_RS03725 IPR036615 Mur ligase, C-terminal domain superfamily DM55_RS03730 IPR006009 N-acetylglucosaminyltransferase, MurG DM55_RS03730 IPR007235 Glycosyl transferase, family 28, C-terminal DM55_RS03730 IPR004276 Glycosyltransferase family 28, N-terminal domain DM55_RS03735 IPR013437 Probable peptidoglycan glycosyltransferase FtsW DM55_RS03735 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA DM55_RS03740 IPR013221 Mur ligase, central DM55_RS03740 IPR036565 Mur-like, catalytic domain superfamily DM55_RS03740 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase DM55_RS03740 IPR004101 Mur ligase, C-terminal DM55_RS03740 IPR036615 Mur ligase, C-terminal domain superfamily DM55_RS03745 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site DM55_RS03745 IPR000715 Glycosyl transferase, family 4 DM55_RS03745 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase DM55_RS03750 IPR036615 Mur ligase, C-terminal domain superfamily DM55_RS03750 IPR013221 Mur ligase, central DM55_RS03750 IPR000713 Mur ligase, N-terminal catalytic domain DM55_RS03750 IPR035911 MurE/MurF, N-terminal DM55_RS03750 IPR036565 Mur-like, catalytic domain superfamily DM55_RS03750 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase DM55_RS03750 IPR004101 Mur ligase, C-terminal DM55_RS03755 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase DM55_RS03755 IPR004101 Mur ligase, C-terminal DM55_RS03755 IPR036615 Mur ligase, C-terminal domain superfamily DM55_RS03755 IPR013221 Mur ligase, central DM55_RS03755 IPR035911 MurE/MurF, N-terminal DM55_RS03755 IPR036565 Mur-like, catalytic domain superfamily DM55_RS03760 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DM55_RS03760 IPR005311 Penicillin-binding protein, dimerisation domain DM55_RS03760 IPR037532 Peptidoglycan D,D-transpeptidase FtsI DM55_RS03760 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS03760 IPR001460 Penicillin-binding protein, transpeptidase DM55_RS03765 IPR011922 Cell division protein FtsL DM55_RS03770 IPR002903 Ribosomal RNA small subunit methyltransferase H DM55_RS03770 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily DM55_RS03770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS03775 IPR038619 MraZ superfamily DM55_RS03775 IPR035642 MraZ, N-terminal DM55_RS03775 IPR003444 Transcriptional regulator MraZ DM55_RS03775 IPR007159 SpoVT-AbrB domain DM55_RS03775 IPR020603 MraZ domain DM55_RS03775 IPR037914 SpoVT-AbrB domain superfamily DM55_RS03775 IPR035644 MraZ, C-terminal DM55_RS03780 IPR009078 Ferritin-like superfamily DM55_RS03780 IPR011566 Ubiquinone biosynthesis protein Coq7 DM55_RS03785 IPR002299 Porin, Neisseria sp. type DM55_RS03785 IPR001702 Porin, Gram-negative type DM55_RS03785 IPR023614 Porin domain superfamily DM55_RS03785 IPR033900 Porin domain, Gram-negative type DM55_RS03795 IPR006158 Cobalamin (vitamin B12)-binding domain DM55_RS03795 IPR011005 Dihydropteroate synthase-like DM55_RS03795 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain DM55_RS03795 IPR003726 Homocysteine-binding domain DM55_RS03795 IPR033706 Methionine synthase, B12-binding domain DM55_RS03795 IPR011822 Cobalamin-dependent methionine synthase DM55_RS03795 IPR036594 Methionine synthase domain DM55_RS03795 IPR036724 Cobalamin-binding domain superfamily DM55_RS03795 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily DM55_RS03795 IPR004223 Vitamin B12-dependent methionine synthase, activation domain DM55_RS03795 IPR000489 Pterin-binding domain DM55_RS03795 IPR036589 Homocysteine-binding domain superfamily DM55_RS03800 IPR011005 Dihydropteroate synthase-like DM55_RS03800 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily DM55_RS03800 IPR004223 Vitamin B12-dependent methionine synthase, activation domain DM55_RS03800 IPR000489 Pterin-binding domain DM55_RS03800 IPR036594 Methionine synthase domain DM55_RS03800 IPR033706 Methionine synthase, B12-binding domain DM55_RS03800 IPR036589 Homocysteine-binding domain superfamily DM55_RS03800 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain DM55_RS03800 IPR006158 Cobalamin (vitamin B12)-binding domain DM55_RS03800 IPR003726 Homocysteine-binding domain DM55_RS03800 IPR036724 Cobalamin-binding domain superfamily DM55_RS03800 IPR011822 Cobalamin-dependent methionine synthase DM55_RS03805 IPR021951 Protein of unknown function DUF3567 DM55_RS03825 IPR001753 Enoyl-CoA hydratase/isomerase DM55_RS03825 IPR014748 Enoyl-CoA hydratase, C-terminal DM55_RS03825 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS03850 IPR011914 RfaE bifunctional protein, domain II DM55_RS03850 IPR004821 Cytidyltransferase-like domain DM55_RS03850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS03860 IPR004619 Type III pantothenate kinase DM55_RS03865 IPR008988 Transcriptional repressor, C-terminal DM55_RS03865 IPR030855 Bifunctional ligase/repressor BirA DM55_RS03865 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS03865 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS03865 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DM55_RS03865 IPR003142 Biotin protein ligase, C-terminal DM55_RS03865 IPR013196 Helix-turn-helix, type 11 DM55_RS03865 IPR004409 Biotin operon repressor, helix-turn-helix domain DM55_RS03865 IPR004408 Biotin--acetyl-CoA-carboxylase ligase DM55_RS03875 IPR008334 5'-Nucleotidase, C-terminal DM55_RS03875 IPR041827 CpdB, N-terminal metallophosphatase domain DM55_RS03875 IPR006146 5'-Nucleotidase, conserved site DM55_RS03875 IPR029052 Metallo-dependent phosphatase-like DM55_RS03875 IPR006179 5'-Nucleotidase/apyrase DM55_RS03875 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase DM55_RS03875 IPR036907 5'-Nucleotidase, C-terminal domain superfamily DM55_RS03875 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DM55_RS03880 IPR030802 ABC transporter permease MalE DM55_RS03880 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DM55_RS03885 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03885 IPR003593 AAA+ ATPase domain DM55_RS03885 IPR003439 ABC transporter-like DM55_RS03885 IPR017871 ABC transporter, conserved site DM55_RS03885 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl DM55_RS03905 IPR036249 Thioredoxin-like superfamily DM55_RS03915 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DM55_RS03915 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DM55_RS03915 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily DM55_RS03915 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DM55_RS03915 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS03915 IPR015956 Penicillin-binding protein, C-terminal domain superfamily DM55_RS03920 IPR001544 Aminotransferase class IV DM55_RS03920 IPR005784 D-amino acid aminotransferase DM55_RS03920 IPR036038 Aminotransferase-like, PLP-dependent enzymes DM55_RS03920 IPR018300 Aminotransferase, class IV, conserved site DM55_RS03925 IPR007454 Uncharacterised protein family UPF0250 DM55_RS03925 IPR027471 YbeD-like domain superfamily DM55_RS03930 IPR005119 LysR, substrate-binding DM55_RS03930 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS03930 IPR000847 Transcription regulator HTH, LysR DM55_RS03930 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS03940 IPR020605 Octanoyltransferase, conserved site DM55_RS03940 IPR000544 Octanoyltransferase DM55_RS03940 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain DM55_RS03945 IPR003698 Lipoyl synthase DM55_RS03945 IPR031691 Lipoyl synthase, N-terminal DM55_RS03945 IPR013785 Aldolase-type TIM barrel DM55_RS03945 IPR007197 Radical SAM DM55_RS03945 IPR006638 Elp3/MiaB/NifB DM55_RS03960 IPR009057 Homeobox-like domain superfamily DM55_RS03960 IPR002514 Transposase IS3/IS911family DM55_RS03980 IPR000101 Gamma-glutamyltranspeptidase DM55_RS03980 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS03990 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS03990 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS03990 IPR000847 Transcription regulator HTH, LysR DM55_RS03990 IPR005119 LysR, substrate-binding DM55_RS03995 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS03995 IPR036291 NAD(P)-binding domain superfamily DM55_RS03995 IPR012802 Fatty oxidation complex, alpha subunit FadJ DM55_RS03995 IPR001753 Enoyl-CoA hydratase/isomerase DM55_RS03995 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS03995 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS03995 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS04000 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS04000 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS04000 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS04000 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS04000 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS04000 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DM55_RS04005 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DM55_RS04005 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS04005 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS04005 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS04005 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS04005 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS04010 IPR003673 CoA-transferase family III DM55_RS04010 IPR023606 CoA-transferase family III domain superfamily DM55_RS04020 IPR014083 Cation/acetate symporter ActP DM55_RS04020 IPR038377 Sodium/glucose symporter superfamily DM55_RS04020 IPR001734 Sodium/solute symporter DM55_RS04020 IPR018212 Sodium/solute symporter, conserved site DM55_RS04025 IPR023954 C4-dicarboxylate transport protein DM55_RS04025 IPR036458 Sodium:dicarboxylate symporter superfamily DM55_RS04025 IPR018107 Sodium:dicarboxylate symporter, conserved site DM55_RS04025 IPR001991 Sodium:dicarboxylate symporter DM55_RS04035 IPR009057 Homeobox-like domain superfamily DM55_RS04035 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DM55_RS04035 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS04035 IPR001789 Signal transduction response regulator, receiver domain DM55_RS04035 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04035 IPR002197 DNA binding HTH domain, Fis-type DM55_RS04035 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS04035 IPR011006 CheY-like superfamily DM55_RS04035 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS04035 IPR003593 AAA+ ATPase domain DM55_RS04040 IPR036249 Thioredoxin-like superfamily DM55_RS04040 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DM55_RS04040 IPR013766 Thioredoxin domain DM55_RS04050 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS04050 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DM55_RS04050 IPR006162 Phosphopantetheine attachment site DM55_RS04050 IPR036736 ACP-like superfamily DM55_RS04050 IPR029058 Alpha/Beta hydrolase fold DM55_RS04050 IPR010071 Amino acid adenylation domain DM55_RS04050 IPR001242 Condensation domain DM55_RS04050 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS04050 IPR020845 AMP-binding, conserved site DM55_RS04050 IPR009081 Phosphopantetheine binding ACP domain DM55_RS04050 IPR001031 Thioesterase DM55_RS04050 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS04050 IPR000873 AMP-dependent synthetase/ligase DM55_RS04065 IPR000523 Magnesium chelatase ChlI domain DM55_RS04065 IPR025158 Mg chelatase-related protein, C-terminal domain DM55_RS04065 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS04065 IPR004482 Mg chelatase-related protein DM55_RS04065 IPR003593 AAA+ ATPase domain DM55_RS04065 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04065 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS04070 IPR007475 Ubiquinone biosynthesis accessory factor UbiK DM55_RS04075 IPR002187 Nitrogen regulatory protein PII DM55_RS04075 IPR011322 Nitrogen regulatory PII-like, alpha/beta DM55_RS04075 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DM55_RS04075 IPR017918 Nitrogen regulatory protein PII, conserved site DM55_RS04075 IPR002332 Nitrogen regulatory protein P-II, urydylation site DM55_RS04080 IPR029020 Ammonium/urea transporter DM55_RS04080 IPR001905 Ammonium transporter DM55_RS04080 IPR018047 Ammonium transporter, conserved site DM55_RS04080 IPR024041 Ammonium transporter AmtB-like domain DM55_RS04095 IPR006284 Glutathione synthetase, prokaryotic DM55_RS04095 IPR004218 Prokaryotic glutathione synthetase, ATP-binding DM55_RS04095 IPR016185 Pre-ATP-grasp domain superfamily DM55_RS04095 IPR011761 ATP-grasp fold DM55_RS04095 IPR004215 Prokaryotic glutathione synthetase, N-terminal DM55_RS04095 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS04105 IPR000032 Phosphocarrier protein HPr-like DM55_RS04105 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DM55_RS04105 IPR035895 HPr-like superfamily DM55_RS04105 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DM55_RS04110 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DM55_RS04110 IPR008731 Phosphotransferase system, enzyme I N-terminal DM55_RS04110 IPR006318 Phosphotransferase system, enzyme I-like DM55_RS04110 IPR024692 Phosphotransferase system, enzyme I DM55_RS04110 IPR000121 PEP-utilising enzyme, C-terminal DM55_RS04110 IPR018274 PEP-utilising enzyme, active site DM55_RS04110 IPR008279 PEP-utilising enzyme, mobile domain DM55_RS04110 IPR036618 PtsI, HPr-binding domain superfamily DM55_RS04110 IPR036637 Phosphohistidine domain superfamily DM55_RS04110 IPR023151 PEP-utilising enzyme, conserved site DM55_RS04110 IPR040442 Pyruvate kinase-like domain superfamily DM55_RS04115 IPR000594 THIF-type NAD/FAD binding fold DM55_RS04115 IPR012730 Molybdopterin synthase sulfurylase MoeB DM55_RS04115 IPR035985 Ubiquitin-activating enzyme DM55_RS04120 IPR005151 Tail specific protease DM55_RS04120 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS04120 IPR036034 PDZ superfamily DM55_RS04120 IPR001478 PDZ domain DM55_RS04120 IPR004447 C-terminal-processing peptidase S41A DM55_RS04125 IPR005952 Phosphoglycerate mutase 1 DM55_RS04125 IPR013078 Histidine phosphatase superfamily, clade-1 DM55_RS04125 IPR029033 Histidine phosphatase superfamily DM55_RS04125 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DM55_RS04130 IPR036873 Rhodanese-like domain superfamily DM55_RS04130 IPR001763 Rhodanese-like domain DM55_RS04135 IPR014025 Glutaredoxin subgroup DM55_RS04135 IPR002109 Glutaredoxin DM55_RS04135 IPR011767 Glutaredoxin active site DM55_RS04135 IPR036249 Thioredoxin-like superfamily DM55_RS04135 IPR011900 Glutaredoxin, GrxC DM55_RS04140 IPR003708 Bacterial protein export chaperone SecB DM55_RS04140 IPR035958 SecB-like superfamily DM55_RS04145 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent DM55_RS04145 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS04145 IPR036291 NAD(P)-binding domain superfamily DM55_RS04145 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal DM55_RS04145 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal DM55_RS04145 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DM55_RS04150 IPR002589 Macro domain DM55_RS04155 IPR001537 tRNA/rRNA methyltransferase, SpoU type DM55_RS04155 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase DM55_RS04155 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS04155 IPR029028 Alpha/beta knot methyltransferases DM55_RS04160 IPR029057 Phosphoribosyltransferase-like DM55_RS04160 IPR000836 Phosphoribosyltransferase domain DM55_RS04160 IPR005222 Competence protein ComF DM55_RS04165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS04165 IPR013216 Methyltransferase type 11 DM55_RS04165 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DM55_RS04175 IPR001505 Copper centre Cu(A) DM55_RS04175 IPR002429 Cytochrome c oxidase subunit II-like C-terminal DM55_RS04175 IPR008972 Cupredoxin DM55_RS04175 IPR014222 Cytochrome c oxidase, subunit II DM55_RS04175 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain DM55_RS04175 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily DM55_RS04180 IPR036927 Cytochrome c oxidase-like, subunit I superfamily DM55_RS04180 IPR014241 Cytochrome c oxidase, subunit I bacterial type DM55_RS04180 IPR033944 Cytochrome c oxidase subunit I domain DM55_RS04180 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site DM55_RS04180 IPR000883 Cytochrome c oxidase subunit I DM55_RS04180 IPR023616 Cytochrome c oxidase-like, subunit I domain DM55_RS04190 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 DM55_RS04190 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily DM55_RS04200 IPR033945 Cytochrome c oxidase subunit III domain DM55_RS04200 IPR024791 Cytochrome c oxidase subunit III DM55_RS04200 IPR000298 Cytochrome c oxidase subunit III-like DM55_RS04200 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle DM55_RS04200 IPR035973 Cytochrome c oxidase subunit III-like superfamily DM55_RS04220 IPR003780 COX15/CtaA family DM55_RS04220 IPR023754 Heme A synthase, type 2 DM55_RS04225 IPR030470 UbiA prenyltransferase conserved site DM55_RS04225 IPR000537 UbiA prenyltransferase family DM55_RS04225 IPR006369 Protohaem IX farnesyltransferase DM55_RS04230 IPR003782 Copper chaperone SCO1/SenC DM55_RS04230 IPR036249 Thioredoxin-like superfamily DM55_RS04240 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DM55_RS04240 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS04240 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DM55_RS04240 IPR003660 HAMP domain DM55_RS04240 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DM55_RS04240 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS04245 IPR004872 Lipoprotein NlpA family DM55_RS04255 IPR018181 Heat shock protein 70, conserved site DM55_RS04255 IPR013126 Heat shock protein 70 family DM55_RS04255 IPR042054 YegD-like DM55_RS04300 IPR014782 Peptidase M1, membrane alanine aminopeptidase DM55_RS04300 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DM55_RS04300 IPR042097 Aminopeptidase N-like , N-terminal DM55_RS04300 IPR034016 Aminopeptidase N-type DM55_RS04300 IPR024571 ERAP1-like C-terminal domain DM55_RS04315 IPR006144 Secretion protein HlyD, conserved site DM55_RS04315 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DM55_RS04320 IPR036640 ABC transporter type 1, transmembrane domain superfamily DM55_RS04320 IPR039421 Type I protein exporter DM55_RS04320 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS04320 IPR003439 ABC transporter-like DM55_RS04320 IPR033838 Colicin V processing peptidase DM55_RS04320 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04320 IPR017871 ABC transporter, conserved site DM55_RS04320 IPR005074 Peptidase C39, bacteriocin processing DM55_RS04320 IPR003593 AAA+ ATPase domain DM55_RS04345 IPR017731 Type VI secretion system, IcmF DM55_RS04345 IPR025743 IcmF-related, N-terminal domain DM55_RS04345 IPR010623 Type VI secretion system IcmF, C-terminal DM55_RS04345 IPR009612 IcmF-related DM55_RS04345 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04355 IPR006690 Outer membrane protein, OmpA-like, conserved site DM55_RS04355 IPR006665 OmpA-like domain DM55_RS04355 IPR006664 Outer membrane protein, bacterial DM55_RS04355 IPR036737 OmpA-like domain superfamily DM55_RS04375 IPR010272 Type VI secretion system, TssF-like DM55_RS04385 IPR025948 HTH-like domain DM55_RS04385 IPR036397 Ribonuclease H superfamily DM55_RS04385 IPR001584 Integrase, catalytic core DM55_RS04385 IPR012337 Ribonuclease H-like superfamily DM55_RS04390 IPR009057 Homeobox-like domain superfamily DM55_RS04390 IPR002514 Transposase IS3/IS911family DM55_RS04395 IPR004136 Nitronate monooxygenase DM55_RS04395 IPR013785 Aldolase-type TIM barrel DM55_RS04400 IPR029058 Alpha/Beta hydrolase fold DM55_RS04400 IPR002925 Dienelactone hydrolase DM55_RS04405 IPR020556 Amidase, conserved site DM55_RS04405 IPR036928 Amidase signature (AS) superfamily DM55_RS04405 IPR023631 Amidase signature domain DM55_RS04405 IPR000120 Amidase DM55_RS04410 IPR029041 FAD-linked oxidoreductase-like DM55_RS04410 IPR003171 Methylenetetrahydrofolate reductase DM55_RS04410 IPR004620 5,10-methylenetetrahydrofolate reductase DM55_RS04415 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV DM55_RS04420 IPR036291 NAD(P)-binding domain superfamily DM55_RS04420 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site DM55_RS04420 IPR042172 Adenosylhomocysteinase-like superfamily DM55_RS04420 IPR000043 Adenosylhomocysteinase-like DM55_RS04420 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DM55_RS04425 IPR014284 RNA polymerase sigma-70 like domain DM55_RS04425 IPR000943 RNA polymerase sigma-70 DM55_RS04425 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS04425 IPR007624 RNA polymerase sigma-70 region 3 DM55_RS04425 IPR012845 RNA polymerase sigma factor, FliA/WhiG DM55_RS04425 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS04425 IPR013324 RNA polymerase sigma factor, region 3/4-like DM55_RS04425 IPR028617 RNA polymerase sigma factor FliA DM55_RS04425 IPR007630 RNA polymerase sigma-70 region 4 DM55_RS04440 IPR001712 Type III secretion system FHIPEP DM55_RS04440 IPR006301 Flagellar biosynthesis protein FlhA DM55_RS04440 IPR025505 FHIPEP conserved site DM55_RS04440 IPR042196 FHIPEP, domain 4 DM55_RS04440 IPR042193 FHIPEP, domain 3 DM55_RS04440 IPR042194 FHIPEP, domain 1 DM55_RS04445 IPR006135 Type III secretion system substrate exporter DM55_RS04445 IPR006136 Flagellar biosynthetic protein FlhB DM55_RS04445 IPR029025 Type III secretion system substrate exporter, C-terminal DM55_RS04465 IPR007439 Chemotaxis phosphatase, CheZ DM55_RS04470 IPR001789 Signal transduction response regulator, receiver domain DM55_RS04470 IPR011006 CheY-like superfamily DM55_RS04475 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase DM55_RS04475 IPR011006 CheY-like superfamily DM55_RS04475 IPR035909 Methylesterase CheB, C-terminal DM55_RS04475 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type DM55_RS04475 IPR001789 Signal transduction response regulator, receiver domain DM55_RS04480 IPR011324 Cytotoxic necrotizing factor-like, catalytic DM55_RS04480 IPR038592 CheD-like superfamily DM55_RS04480 IPR005659 Chemoreceptor glutamine deamidase CheD DM55_RS04485 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DM55_RS04485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS04485 IPR026024 Chemotaxis protein methyltransferase CheR DM55_RS04485 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DM55_RS04485 IPR000780 MCP methyltransferase, CheR-type DM55_RS04485 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily DM55_RS04490 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DM55_RS04490 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS04490 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DM55_RS04490 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS04490 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DM55_RS04490 IPR003660 HAMP domain DM55_RS04495 IPR002545 CheW-like domain DM55_RS04495 IPR036061 CheW-like domain superfamily DM55_RS04495 IPR039315 Chemotaxis protein CheW DM55_RS04505 IPR035909 Methylesterase CheB, C-terminal DM55_RS04505 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type DM55_RS04505 IPR011006 CheY-like superfamily DM55_RS04505 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase DM55_RS04505 IPR001789 Signal transduction response regulator, receiver domain DM55_RS04510 IPR036737 OmpA-like domain superfamily DM55_RS04510 IPR025713 Motility protein B, N-terminal domain DM55_RS04510 IPR006665 OmpA-like domain DM55_RS04515 IPR000540 Flagellar motor protein MotA, conserved site DM55_RS04515 IPR022522 Flagellar motor stator, MotA DM55_RS04515 IPR002898 MotA/TolQ/ExbB proton channel DM55_RS04520 IPR007944 Flagellar transcriptional activator FlhC DM55_RS04525 IPR036194 Flagellar transcriptional activator FlhD superfamily DM55_RS04525 IPR023559 Flagellar transcriptional activator FlhD DM55_RS04530 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DM55_RS04540 IPR034294 Aquaporin transporter DM55_RS04540 IPR022357 Major intrinsic protein, conserved site DM55_RS04540 IPR000425 Major intrinsic protein DM55_RS04540 IPR023743 Aquaporin Z DM55_RS04540 IPR023271 Aquaporin-like DM55_RS04545 IPR000150 Cof family DM55_RS04545 IPR036412 HAD-like superfamily DM55_RS04545 IPR006379 HAD-superfamily hydrolase, subfamily IIB DM55_RS04555 IPR011257 DNA glycosylase DM55_RS04555 IPR029062 Class I glutamine amidotransferase-like DM55_RS04555 IPR005019 Methyladenine glycosylase DM55_RS04555 IPR000182 GNAT domain DM55_RS04555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS04555 IPR025777 GMP synthetase ATP pyrophosphatase domain DM55_RS04555 IPR001674 GMP synthase, C-terminal DM55_RS04555 IPR016181 Acyl-CoA N-acyltransferase DM55_RS04555 IPR017926 Glutamine amidotransferase DM55_RS04560 IPR001911 Ribosomal protein S21 DM55_RS04560 IPR038380 Ribosomal protein S21 superfamily DM55_RS04565 IPR001492 Flagellin DM55_RS04565 IPR001029 Flagellin, D0/D1 domain DM55_RS04585 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DM55_RS04585 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS04585 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS04590 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM55_RS04590 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal DM55_RS04590 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 DM55_RS04590 IPR016039 Thiolase-like DM55_RS04600 IPR016039 Thiolase-like DM55_RS04600 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM55_RS04600 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 DM55_RS04600 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal DM55_RS04605 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS04605 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DM55_RS04605 IPR036291 NAD(P)-binding domain superfamily DM55_RS04605 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS04630 IPR004778 Homoserine/Threonine efflux protein DM55_RS04630 IPR001123 Amino acid exporter protein, LeuE-type DM55_RS04635 IPR006311 Twin-arginine translocation pathway, signal sequence DM55_RS04635 IPR007312 Phosphoesterase DM55_RS04635 IPR017850 Alkaline-phosphatase-like, core domain superfamily DM55_RS04640 IPR008517 Protein of unknown function DUF799 DM55_RS04650 IPR005534 Curli production assembly/transport component CsgG DM55_RS04660 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS04660 IPR029058 Alpha/Beta hydrolase fold DM55_RS04660 IPR019913 Pyrimidine utilisation protein RutD DM55_RS04665 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DM55_RS04665 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DM55_RS04665 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS04665 IPR003660 HAMP domain DM55_RS04665 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DM55_RS04665 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS04675 IPR016166 FAD-binding domain, PCMH-type DM55_RS04675 IPR006094 FAD linked oxidase, N-terminal DM55_RS04675 IPR012951 Berberine/berberine-like DM55_RS04675 IPR006311 Twin-arginine translocation pathway, signal sequence DM55_RS04675 IPR036318 FAD-binding, type PCMH-like superfamily DM55_RS04680 IPR004302 Cellulose/chitin-binding protein, N-terminal DM55_RS04680 IPR020879 N-acetylglucosamine-binding protein A DM55_RS04680 IPR014756 Immunoglobulin E-set DM55_RS04680 IPR041029 N-acetylglucosamine binding protein A domain 2 DM55_RS04690 IPR009057 Homeobox-like domain superfamily DM55_RS04690 IPR002514 Transposase IS3/IS911family DM55_RS04695 IPR001584 Integrase, catalytic core DM55_RS04695 IPR036397 Ribonuclease H superfamily DM55_RS04695 IPR012337 Ribonuclease H-like superfamily DM55_RS04695 IPR025948 HTH-like domain DM55_RS04705 IPR028081 Leucine-binding protein domain DM55_RS04705 IPR000709 Leu/Ile/Val-binding protein DM55_RS04705 IPR028082 Periplasmic binding protein-like I DM55_RS04710 IPR036259 MFS transporter superfamily DM55_RS04710 IPR011701 Major facilitator superfamily DM55_RS04725 IPR027470 Cation efflux protein, cytoplasmic domain DM55_RS04725 IPR027469 Cation efflux transmembrane domain superfamily DM55_RS04725 IPR036837 Cation efflux protein, cytoplasmic domain superfamily DM55_RS04725 IPR002524 Cation efflux protein DM55_RS04730 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS04730 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DM55_RS04730 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DM55_RS04730 IPR019888 Transcription regulator AsnC-type DM55_RS04730 IPR011008 Dimeric alpha-beta barrel DM55_RS04730 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS04730 IPR000485 AsnC-type HTH domain DM55_RS04740 IPR001279 Metallo-beta-lactamase DM55_RS04740 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DM55_RS04745 IPR007730 Sporulation-like domain DM55_RS04745 IPR012997 Rare lipoprotein A DM55_RS04745 IPR036908 RlpA-like domain superfamily DM55_RS04745 IPR009009 RlpA-like protein, double-psi beta-barrel domain DM55_RS04745 IPR034718 Endolytic peptidoglycan transglycosylase RlpA DM55_RS04755 IPR020816 Histone-like DNA-binding protein, conserved site DM55_RS04755 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DM55_RS04755 IPR000119 Histone-like DNA-binding protein DM55_RS04760 IPR008471 MnmC-like methyltransferase DM55_RS04760 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC DM55_RS04760 IPR006076 FAD dependent oxidoreductase DM55_RS04760 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS04760 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal DM55_RS04770 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DM55_RS04770 IPR011793 Putative glutamate--cysteine ligase YbdK DM55_RS04770 IPR006336 Glutamate--cysteine ligase, GCS2 DM55_RS04780 IPR029062 Class I glutamine amidotransferase-like DM55_RS04780 IPR017926 Glutamine amidotransferase DM55_RS04780 IPR001674 GMP synthase, C-terminal DM55_RS04780 IPR004739 GMP synthase, glutamine amidotransferase DM55_RS04780 IPR022955 GMP synthase DM55_RS04780 IPR025777 GMP synthetase ATP pyrophosphatase domain DM55_RS04780 IPR022310 NAD/GMP synthase DM55_RS04780 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS04785 IPR023663 NADPH dehydrogenase DM55_RS04785 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DM55_RS04785 IPR013785 Aldolase-type TIM barrel DM55_RS04800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS04800 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS04800 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS04800 IPR005467 Histidine kinase domain DM55_RS04800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS04800 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS04800 IPR003660 HAMP domain DM55_RS04800 IPR013727 Two-component sensor kinase, N-terminal DM55_RS04805 IPR001789 Signal transduction response regulator, receiver domain DM55_RS04805 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS04805 IPR039420 Transcriptional regulatory protein WalR-like DM55_RS04805 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS04805 IPR001867 OmpR/PhoB-type DNA-binding domain DM55_RS04805 IPR011006 CheY-like superfamily DM55_RS04815 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily DM55_RS04815 IPR001533 Pterin 4 alpha carbinolamine dehydratase DM55_RS04820 IPR019774 Aromatic amino acid hydroxylase, C-terminal DM55_RS04820 IPR001273 Aromatic amino acid hydroxylase DM55_RS04820 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily DM55_RS04820 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site DM55_RS04820 IPR005960 Phenylalanine-4-hydroxylase, monomeric form DM55_RS04820 IPR036951 Aromatic amino acid hydroxylase superfamily DM55_RS04825 IPR011008 Dimeric alpha-beta barrel DM55_RS04825 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS04825 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DM55_RS04825 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DM55_RS04825 IPR019888 Transcription regulator AsnC-type DM55_RS04825 IPR000485 AsnC-type HTH domain DM55_RS04825 IPR011991 ArsR-like helix-turn-helix domain DM55_RS04825 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS04835 IPR037409 HTH-type transcriptional regulator XapR, PBP2 domain DM55_RS04835 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS04835 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS04835 IPR005119 LysR, substrate-binding DM55_RS04835 IPR000847 Transcription regulator HTH, LysR DM55_RS04840 IPR010061 Methylmalonate-semialdehyde dehydrogenase DM55_RS04840 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS04840 IPR016160 Aldehyde dehydrogenase, cysteine active site DM55_RS04840 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS04840 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS04840 IPR015590 Aldehyde dehydrogenase domain DM55_RS04845 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal DM55_RS04845 IPR012132 Glucose-methanol-choline oxidoreductase DM55_RS04845 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal DM55_RS04845 IPR027424 Glucose Oxidase, domain 2 DM55_RS04845 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS04850 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04850 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DM55_RS04850 IPR017871 ABC transporter, conserved site DM55_RS04850 IPR003593 AAA+ ATPase domain DM55_RS04850 IPR003439 ABC transporter-like DM55_RS04855 IPR017871 ABC transporter, conserved site DM55_RS04855 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04855 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein DM55_RS04855 IPR003439 ABC transporter-like DM55_RS04855 IPR003593 AAA+ ATPase domain DM55_RS04865 IPR001851 ABC transporter, permease DM55_RS04890 IPR003439 ABC transporter-like DM55_RS04890 IPR003593 AAA+ ATPase domain DM55_RS04890 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DM55_RS04890 IPR017871 ABC transporter, conserved site DM55_RS04890 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04895 IPR003439 ABC transporter-like DM55_RS04895 IPR003593 AAA+ ATPase domain DM55_RS04895 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein DM55_RS04895 IPR017871 ABC transporter, conserved site DM55_RS04895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04900 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS04900 IPR020595 MnmG-related, conserved site DM55_RS04900 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related DM55_RS04900 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG DM55_RS04900 IPR026904 GidA associated domain 3 DM55_RS04905 IPR003682 rRNA small subunit methyltransferase G DM55_RS04905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS04910 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04910 IPR025669 AAA domain DM55_RS04915 IPR004437 ParB/RepB/Spo0J partition protein DM55_RS04915 IPR041468 ParB/Spo0J, HTH domain DM55_RS04915 IPR003115 ParB/Sulfiredoxin DM55_RS04915 IPR036086 ParB/Sulfiredoxin superfamily DM55_RS04920 IPR004680 Citrate transporter-like domain DM55_RS04930 IPR035908 ATP synthase, F0 complex, subunit A superfamily DM55_RS04930 IPR000568 ATP synthase, F0 complex, subunit A DM55_RS04930 IPR023011 ATP synthase, F0 complex, subunit A, active site DM55_RS04935 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site DM55_RS04935 IPR000454 ATP synthase, F0 complex, subunit C DM55_RS04935 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast DM55_RS04935 IPR035921 F/V-ATP synthase subunit C superfamily DM55_RS04935 IPR038662 F1F0 ATP synthase subunit C superfamily DM55_RS04935 IPR002379 V-ATPase proteolipid subunit C-like domain DM55_RS04940 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily DM55_RS04940 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast DM55_RS04940 IPR005864 ATP synthase, F0 complex, subunit b, bacterial DM55_RS04945 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily DM55_RS04945 IPR000711 ATPase, OSCP/delta subunit DM55_RS04950 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DM55_RS04950 IPR005294 ATP synthase, F1 complex, alpha subunit DM55_RS04950 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain DM55_RS04950 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily DM55_RS04950 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04950 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DM55_RS04950 IPR000793 ATP synthase, alpha subunit, C-terminal DM55_RS04950 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DM55_RS04950 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DM55_RS04950 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily DM55_RS04955 IPR000131 ATP synthase, F1 complex, gamma subunit DM55_RS04955 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily DM55_RS04955 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site DM55_RS04960 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily DM55_RS04960 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DM55_RS04960 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal DM55_RS04960 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DM55_RS04960 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain DM55_RS04960 IPR003593 AAA+ ATPase domain DM55_RS04960 IPR005722 ATP synthase, F1 complex, beta subunit DM55_RS04960 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04965 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal DM55_RS04965 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal DM55_RS04965 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily DM55_RS04965 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain DM55_RS04965 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit DM55_RS04970 IPR000873 AMP-dependent synthetase/ligase DM55_RS04970 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS04970 IPR020845 AMP-binding, conserved site DM55_RS04975 IPR036291 NAD(P)-binding domain superfamily DM55_RS04975 IPR003781 CoA-binding DM55_RS04980 IPR037298 Cyclohexadienyl dehydratase pheC DM55_RS04980 IPR018313 Solute-binding protein family 3, conserved site DM55_RS04980 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DM55_RS04985 IPR000257 Uroporphyrinogen decarboxylase (URO-D) DM55_RS04985 IPR038071 UROD/MetE-like superfamily DM55_RS04985 IPR006361 Uroporphyrinogen decarboxylase HemE DM55_RS04990 IPR005259 Primosomal protein N' DM55_RS04990 IPR041222 Primosomal protein N', 3' DNA-binding domain DM55_RS04990 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04990 IPR001650 Helicase, C-terminal DM55_RS04990 IPR014001 Helicase superfamily 1/2, ATP-binding domain DM55_RS04990 IPR041236 Primosomal protein N, C-terminal domain DM55_RS04990 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain DM55_RS04990 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily DM55_RS04990 IPR011545 DEAD/DEAH box helicase domain DM55_RS05000 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain DM55_RS05000 IPR024090 Proline dehydrogenase PutA, domain I DM55_RS05000 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS05000 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS05000 IPR024089 Proline dehydrogenase PutA, domain I/II DM55_RS05000 IPR002872 Proline dehydrogenase domain DM55_RS05000 IPR024082 Proline dehydrogenase PutA, domain II DM55_RS05000 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS05000 IPR010985 Ribbon-helix-helix DM55_RS05000 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS05000 IPR015590 Aldehyde dehydrogenase domain DM55_RS05000 IPR013321 Arc-type ribbon-helix-helix DM55_RS05000 IPR025703 Bifunctional protein PutA DM55_RS05000 IPR029041 FAD-linked oxidoreductase-like DM55_RS05000 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 DM55_RS05000 IPR016160 Aldehyde dehydrogenase, cysteine active site DM55_RS05005 IPR000709 Leu/Ile/Val-binding protein DM55_RS05005 IPR028082 Periplasmic binding protein-like I DM55_RS05005 IPR028081 Leucine-binding protein domain DM55_RS05010 IPR000873 AMP-dependent synthetase/ligase DM55_RS05010 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS05010 IPR020845 AMP-binding, conserved site DM55_RS05010 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS05015 IPR041504 Adaptive response protein AidB, N-terminal DM55_RS05015 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS05015 IPR034184 Putative acyl-CoA dehydrogenase AidB DM55_RS05015 IPR006089 Acyl-CoA dehydrogenase, conserved site DM55_RS05015 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS05015 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS05015 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS05025 IPR004839 Aminotransferase, class I/classII DM55_RS05025 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS05025 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS05025 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS05030 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DM55_RS05030 IPR018313 Solute-binding protein family 3, conserved site DM55_RS05030 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DM55_RS05045 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DM55_RS05045 IPR006094 FAD linked oxidase, N-terminal DM55_RS05045 IPR004490 Glycolate oxidase subunit GlcD DM55_RS05045 IPR004113 FAD-linked oxidase, C-terminal DM55_RS05045 IPR016166 FAD-binding domain, PCMH-type DM55_RS05045 IPR036318 FAD-binding, type PCMH-like superfamily DM55_RS05045 IPR016164 FAD-linked oxidase-like, C-terminal DM55_RS05055 IPR000551 MerR-type HTH domain DM55_RS05055 IPR009061 Putative DNA-binding domain superfamily DM55_RS05055 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator DM55_RS05060 IPR001757 P-type ATPase DM55_RS05060 IPR023214 HAD superfamily DM55_RS05060 IPR023299 P-type ATPase, cytoplasmic domain N DM55_RS05060 IPR023298 P-type ATPase, transmembrane domain superfamily DM55_RS05060 IPR036163 Heavy metal-associated domain superfamily DM55_RS05060 IPR006121 Heavy metal-associated domain, HMA DM55_RS05060 IPR008250 P-type ATPase, A domain superfamily DM55_RS05060 IPR027256 P-type ATPase, subfamily IB DM55_RS05060 IPR017969 Heavy-metal-associated, conserved site DM55_RS05060 IPR018303 P-type ATPase, phosphorylation site DM55_RS05060 IPR036412 HAD-like superfamily DM55_RS05075 IPR008910 Conserved TM helix DM55_RS05095 IPR002293 Amino acid/polyamine transporter I DM55_RS05115 IPR002585 Cytochrome ubiquinol oxidase subunit 1 DM55_RS05120 IPR003317 Cytochrome ubiquinol oxidase subunit 2 DM55_RS05125 IPR011724 Cyd operon protein YbgT DM55_RS05125 IPR012994 Membrane bound YbgT-like DM55_RS05135 IPR014756 Immunoglobulin E-set DM55_RS05135 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily DM55_RS05135 IPR015883 Glycoside hydrolase family 20, catalytic domain DM55_RS05135 IPR025705 Beta-hexosaminidase DM55_RS05135 IPR012291 CBM2, carbohydrate-binding domain superfamily DM55_RS05135 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain DM55_RS05135 IPR004867 Chitobiase C-terminal domain DM55_RS05135 IPR029018 Beta-hexosaminidase-like, domain 2 DM55_RS05135 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal DM55_RS05135 IPR013783 Immunoglobulin-like fold DM55_RS05135 IPR017853 Glycoside hydrolase superfamily DM55_RS05140 IPR036878 Glucose permease domain IIB DM55_RS05140 IPR001996 Phosphotransferase system, IIB component, type 1 DM55_RS05140 IPR011055 Duplicated hybrid motif DM55_RS05140 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 DM55_RS05140 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site DM55_RS05140 IPR013013 Phosphotransferase system, EIIC component, type 1 DM55_RS05140 IPR003352 Phosphotransferase system, EIIC DM55_RS05140 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component DM55_RS05145 IPR018274 PEP-utilising enzyme, active site DM55_RS05145 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DM55_RS05145 IPR036618 PtsI, HPr-binding domain superfamily DM55_RS05145 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DM55_RS05145 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DM55_RS05145 IPR008731 Phosphotransferase system, enzyme I N-terminal DM55_RS05145 IPR002178 PTS EIIA type-2 domain DM55_RS05145 IPR000032 Phosphocarrier protein HPr-like DM55_RS05145 IPR016152 Phosphotransferase/anion transporter DM55_RS05145 IPR036637 Phosphohistidine domain superfamily DM55_RS05145 IPR023151 PEP-utilising enzyme, conserved site DM55_RS05145 IPR035895 HPr-like superfamily DM55_RS05145 IPR000121 PEP-utilising enzyme, C-terminal DM55_RS05145 IPR008279 PEP-utilising enzyme, mobile domain DM55_RS05145 IPR006318 Phosphotransferase system, enzyme I-like DM55_RS05145 IPR040442 Pyruvate kinase-like domain superfamily DM55_RS05150 IPR001347 Sugar isomerase (SIS) DM55_RS05150 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS05150 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DM55_RS05150 IPR017932 Glutamine amidotransferase type 2 domain DM55_RS05150 IPR035490 GlmS/FrlB, SIS domain 2 DM55_RS05150 IPR035466 GlmS/AgaS, SIS domain 1 DM55_RS05155 IPR032466 Metal-dependent hydrolase DM55_RS05155 IPR011059 Metal-dependent hydrolase, composite domain superfamily DM55_RS05155 IPR003764 N-acetylglucosamine-6-phosphate deacetylase DM55_RS05155 IPR006680 Amidohydrolase-related DM55_RS05160 IPR000524 Transcription regulator HTH, GntR DM55_RS05160 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DM55_RS05160 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS05160 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS05160 IPR011663 UbiC transcription regulator-associated DM55_RS05165 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS05165 IPR005119 LysR, substrate-binding DM55_RS05165 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS05165 IPR000847 Transcription regulator HTH, LysR DM55_RS05170 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS05170 IPR000873 AMP-dependent synthetase/ligase DM55_RS05210 IPR010060 Non-ribosomal peptide synthase DM55_RS05210 IPR001242 Condensation domain DM55_RS05210 IPR009081 Phosphopantetheine binding ACP domain DM55_RS05210 IPR006162 Phosphopantetheine attachment site DM55_RS05210 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS05210 IPR000873 AMP-dependent synthetase/ligase DM55_RS05210 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS05210 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DM55_RS05210 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS05210 IPR036736 ACP-like superfamily DM55_RS05210 IPR010071 Amino acid adenylation domain DM55_RS05210 IPR020845 AMP-binding, conserved site DM55_RS05220 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DM55_RS05220 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS05220 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS05220 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS05220 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS05220 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DM55_RS05220 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS05230 IPR041698 Methyltransferase domain 25 DM55_RS05230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS05240 IPR017871 ABC transporter, conserved site DM55_RS05240 IPR005666 Sulphate transport system permease protein 1 DM55_RS05240 IPR003593 AAA+ ATPase domain DM55_RS05240 IPR024765 TOBE-like domain DM55_RS05240 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal DM55_RS05240 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS05240 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05240 IPR003439 ABC transporter-like DM55_RS05255 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS05255 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS05255 IPR004637 2,4-diaminobutyrate 4-transaminase DM55_RS05255 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS05255 IPR005814 Aminotransferase class-III DM55_RS05265 IPR011701 Major facilitator superfamily DM55_RS05265 IPR020846 Major facilitator superfamily domain DM55_RS05265 IPR036259 MFS transporter superfamily DM55_RS05275 IPR023073 DNA polymerase, error-prone DM55_RS05275 IPR029460 DNA polymerase, helix-hairpin-helix motif DM55_RS05275 IPR040982 DNA polymerase III alpha subunit finger domain DM55_RS05275 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain DM55_RS05275 IPR003141 Polymerase/histidinol phosphatase, N-terminal DM55_RS05275 IPR004805 DNA polymerase III, alpha subunit DM55_RS05275 IPR004013 PHP domain DM55_RS05275 IPR016195 Polymerase/histidinol phosphatase-like DM55_RS05285 IPR004596 Cell division suppressor protein, SulA DM55_RS05285 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05290 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05290 IPR003439 ABC transporter-like DM55_RS05290 IPR003593 AAA+ ATPase domain DM55_RS05290 IPR017871 ABC transporter, conserved site DM55_RS05290 IPR012693 ABC transporter, phosphonate import, PhnC DM55_RS05310 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS05310 IPR013324 RNA polymerase sigma factor, region 3/4-like DM55_RS05310 IPR000943 RNA polymerase sigma-70 DM55_RS05310 IPR009042 RNA polymerase sigma-70 region 1.2 DM55_RS05310 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS05310 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria DM55_RS05310 IPR014284 RNA polymerase sigma-70 like domain DM55_RS05310 IPR007630 RNA polymerase sigma-70 region 4 DM55_RS05315 IPR018550 Lipid A 3-O-deacylase-related DM55_RS05315 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DM55_RS05325 IPR000891 Pyruvate carboxyltransferase DM55_RS05325 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain DM55_RS05325 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site DM55_RS05325 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily DM55_RS05325 IPR005668 2-isopropylmalate synthase DM55_RS05325 IPR013785 Aldolase-type TIM barrel DM55_RS05325 IPR039371 LeuA, N-terminal catalytic TIM barrel domain DM55_RS05335 IPR017459 Glycosyl transferase family 3, N-terminal domain DM55_RS05335 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily DM55_RS05335 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily DM55_RS05340 IPR006657 Molybdopterin dinucleotide-binding domain DM55_RS05340 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DM55_RS05340 IPR006656 Molybdopterin oxidoreductase DM55_RS05340 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DM55_RS05340 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DM55_RS05340 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain DM55_RS05340 IPR009010 Aspartate decarboxylase-like domain superfamily DM55_RS05345 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DM55_RS05345 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DM55_RS05350 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal DM55_RS05350 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DM55_RS05350 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DM55_RS05350 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily DM55_RS05350 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB DM55_RS05350 IPR017121 Nitrite reductase [NAD(P)H], large subunit DM55_RS05350 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DM55_RS05350 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site DM55_RS05350 IPR023753 FAD/NAD(P)-binding domain DM55_RS05350 IPR007419 BFD-like [2Fe-2S]-binding domain DM55_RS05350 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DM55_RS05350 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS05360 IPR040079 Glutathione Transferase family DM55_RS05360 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DM55_RS05360 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS05360 IPR005955 Glutathione S-transferases, class Zeta DM55_RS05360 IPR004045 Glutathione S-transferase, N-terminal DM55_RS05360 IPR034333 Glutathione S-transferases, class Zeta , N-terminal DM55_RS05360 IPR034330 Glutathione S-transferases, class Zeta , C-terminal DM55_RS05360 IPR036249 Thioredoxin-like superfamily DM55_RS05360 IPR004046 Glutathione S-transferase, C-terminal DM55_RS05365 IPR004390 Signal-recognition particle receptor FtsY DM55_RS05365 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DM55_RS05365 IPR036225 SRP/SRP receptor, N-terminal DM55_RS05365 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05365 IPR013822 Signal recognition particle SRP54, helical bundle DM55_RS05365 IPR003593 AAA+ ATPase domain DM55_RS05365 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DM55_RS05370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS05370 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DM55_RS05370 IPR004398 RNA methyltransferase, RsmD DM55_RS05375 IPR004821 Cytidyltransferase-like domain DM55_RS05375 IPR001980 Phosphopantetheine adenylyltransferase DM55_RS05375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS05380 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS05380 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS05385 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS05385 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS05385 IPR005861 Histidinol-phosphate aminotransferase family DM55_RS05385 IPR004839 Aminotransferase, class I/classII DM55_RS05385 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS05385 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DM55_RS05390 IPR001328 Peptidyl-tRNA hydrolase DM55_RS05390 IPR036416 Peptidyl-tRNA hydrolase superfamily DM55_RS05390 IPR018171 Peptidyl-tRNA hydrolase, conserved site DM55_RS05395 IPR001021 Ribosomal protein L25, long-form DM55_RS05395 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal DM55_RS05395 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily DM55_RS05395 IPR037121 Ribosomal protein L25, C-terminal DM55_RS05395 IPR020057 Ribosomal protein L25, beta domain DM55_RS05395 IPR029751 Ribosomal protein L25 DM55_RS05400 IPR029057 Phosphoribosyltransferase-like DM55_RS05400 IPR000836 Phosphoribosyltransferase domain DM55_RS05400 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type DM55_RS05400 IPR005946 Ribose-phosphate pyrophosphokinase DM55_RS05400 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain DM55_RS05400 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site DM55_RS05410 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS05410 IPR013750 GHMP kinase, C-terminal domain DM55_RS05410 IPR006204 GHMP kinase N-terminal domain DM55_RS05410 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase DM55_RS05410 IPR036554 GHMP kinase, C-terminal domain superfamily DM55_RS05410 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS05415 IPR029046 Lipoprotein localisation LolA/LolB/LppX DM55_RS05415 IPR004565 Outer membrane lipoprotein LolB DM55_RS05425 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding DM55_RS05425 IPR010663 Zinc finger, FPG/IleRS-type DM55_RS05425 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type DM55_RS05425 IPR035937 MutM-like, N-terminal DM55_RS05425 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain DM55_RS05425 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site DM55_RS05425 IPR020629 Formamidopyrimidine-DNA glycosylase DM55_RS05425 IPR010979 Ribosomal protein S13-like, H2TH DM55_RS05430 IPR011257 DNA glycosylase DM55_RS05430 IPR004036 Endonuclease III-like, conserved site-2 DM55_RS05430 IPR005760 A/G-specific adenine glycosylase MutY DM55_RS05430 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif DM55_RS05430 IPR004035 Endonuclease III, iron-sulphur binding site DM55_RS05430 IPR003265 HhH-GPD domain DM55_RS05430 IPR029119 MutY, C-terminal DM55_RS05430 IPR000445 Helix-hairpin-helix motif DM55_RS05430 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DM55_RS05430 IPR015797 NUDIX hydrolase-like domain superfamily DM55_RS05440 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05440 IPR005337 RapZ-like family DM55_RS05445 IPR011104 HPr kinase/phosphorylase, C-terminal DM55_RS05445 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DM55_RS05445 IPR003755 HPr(Ser) kinase/phosphorylase DM55_RS05445 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal DM55_RS05450 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN DM55_RS05450 IPR016152 Phosphotransferase/anion transporter DM55_RS05450 IPR002178 PTS EIIA type-2 domain DM55_RS05455 IPR003489 Ribosome hibernation promoting factor/RaiA DM55_RS05455 IPR036567 Ribosome hibernation promotion factor-like DM55_RS05460 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DM55_RS05460 IPR007634 RNA polymerase sigma factor 54, DNA-binding DM55_RS05460 IPR000394 RNA polymerase sigma factor 54 DM55_RS05460 IPR007046 RNA polymerase sigma factor 54, core-binding domain DM55_RS05465 IPR003439 ABC transporter-like DM55_RS05465 IPR017871 ABC transporter, conserved site DM55_RS05465 IPR003593 AAA+ ATPase domain DM55_RS05465 IPR030921 LPS export ABC transporter, ATP-binding protein LptB DM55_RS05465 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05465 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DM55_RS05480 IPR023214 HAD superfamily DM55_RS05480 IPR010023 KdsC family DM55_RS05480 IPR036412 HAD-like superfamily DM55_RS05485 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type DM55_RS05485 IPR001347 Sugar isomerase (SIS) DM55_RS05485 IPR035474 KpsF-like, SIS domain DM55_RS05485 IPR000644 CBS domain DM55_RS05490 IPR038770 Sodium/solute symporter superfamily DM55_RS05490 IPR006037 Regulator of K+ conductance, C-terminal DM55_RS05490 IPR003148 Regulator of K+ conductance, N-terminal DM55_RS05490 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DM55_RS05490 IPR036291 NAD(P)-binding domain superfamily DM55_RS05490 IPR006153 Cation/H+ exchanger DM55_RS05495 IPR029057 Phosphoribosyltransferase-like DM55_RS05495 IPR005764 Adenine phosphoribosyl transferase DM55_RS05495 IPR000836 Phosphoribosyltransferase domain DM55_RS05500 IPR004778 Homoserine/Threonine efflux protein DM55_RS05500 IPR001123 Amino acid exporter protein, LeuE-type DM55_RS05510 IPR004810 Formyltetrahydrofolate deformylase DM55_RS05510 IPR036477 Formyl transferase, N-terminal domain superfamily DM55_RS05510 IPR002376 Formyl transferase, N-terminal DM55_RS05510 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain DM55_RS05510 IPR002912 ACT domain DM55_RS05520 IPR041102 UvrA, interaction domain DM55_RS05520 IPR041552 UvrA DNA-binding domain DM55_RS05520 IPR004602 UvrABC system subunit A DM55_RS05520 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05520 IPR017871 ABC transporter, conserved site DM55_RS05520 IPR003439 ABC transporter-like DM55_RS05525 IPR036259 MFS transporter superfamily DM55_RS05525 IPR020846 Major facilitator superfamily domain DM55_RS05525 IPR011701 Major facilitator superfamily DM55_RS05530 IPR012340 Nucleic acid-binding, OB-fold DM55_RS05530 IPR011344 Single-stranded DNA-binding protein DM55_RS05530 IPR000424 Primosome PriB/single-strand DNA-binding DM55_RS05535 IPR009057 Homeobox-like domain superfamily DM55_RS05535 IPR002514 Transposase IS3/IS911family DM55_RS05540 IPR001584 Integrase, catalytic core DM55_RS05540 IPR036397 Ribonuclease H superfamily DM55_RS05540 IPR012337 Ribonuclease H-like superfamily DM55_RS05540 IPR025948 HTH-like domain DM55_RS05545 IPR004840 Amino acid permease, conserved site DM55_RS05545 IPR004841 Amino acid permease/ SLC12A domain DM55_RS05555 IPR036909 Cytochrome c-like domain superfamily DM55_RS05555 IPR002324 Cytochrome c, class ID DM55_RS05555 IPR009056 Cytochrome c-like domain DM55_RS05560 IPR014004 Transport-associated and nodulation domain, bacteria DM55_RS05560 IPR007055 BON domain DM55_RS05565 IPR001347 Sugar isomerase (SIS) DM55_RS05565 IPR004515 Phosphoheptose isomerase DM55_RS05565 IPR035461 GmhA/DiaA DM55_RS05570 IPR003509 Uncharacterised protein family UPF0102 DM55_RS05570 IPR011335 Restriction endonuclease type II-like DM55_RS05570 IPR011856 tRNA endonuclease-like domain superfamily DM55_RS05575 IPR008189 rRNA small subunit methyltransferase I DM55_RS05575 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS05575 IPR000878 Tetrapyrrole methylase DM55_RS05575 IPR018063 SAM-dependent methyltransferase RsmI, conserved site DM55_RS05575 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS05575 IPR035996 Tetrapyrrole methylase superfamily DM55_RS05590 IPR010628 Ethanolamine ammonia lyase large subunit DM55_RS05590 IPR013785 Aldolase-type TIM barrel DM55_RS05595 IPR042255 Ethanolamine ammonia-lyase light chain, N-terminal DM55_RS05595 IPR042251 Ethanolamine ammonia-lyase light chain, C-terminal DM55_RS05595 IPR009246 Ethanolamine ammonia-lyase light chain DM55_RS05605 IPR016160 Aldehyde dehydrogenase, cysteine active site DM55_RS05605 IPR015590 Aldehyde dehydrogenase domain DM55_RS05605 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS05605 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS05605 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS05605 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS05610 IPR009057 Homeobox-like domain superfamily DM55_RS05610 IPR018060 DNA binding HTH domain, AraC-type DM55_RS05610 IPR018062 HTH domain AraC-type, conserved site DM55_RS05620 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DM55_RS05620 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DM55_RS05620 IPR029035 DHS-like NAD/FAD-binding domain superfamily DM55_RS05620 IPR012000 Thiamine pyrophosphate enzyme, central domain DM55_RS05620 IPR029061 Thiamin diphosphate-binding fold DM55_RS05620 IPR039368 Acetolactate synthase large subunit, TPP binding domain DM55_RS05620 IPR012846 Acetolactate synthase, large subunit, biosynthetic DM55_RS05630 IPR005131 Serine dehydratase beta chain DM55_RS05630 IPR029009 Allosteric substrate binding domain superfamily DM55_RS05630 IPR005130 Serine dehydratase-like, alpha subunit DM55_RS05630 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DM55_RS05640 IPR003437 Glycine dehydrogenase (decarboxylating) DM55_RS05640 IPR020581 Glycine cleavage system P protein DM55_RS05640 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS05640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS05640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS05645 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DM55_RS05645 IPR011053 Single hybrid motif DM55_RS05645 IPR017453 Glycine cleavage system H-protein, subgroup DM55_RS05645 IPR033753 Glycine cleavage system H-protein/Simiate DM55_RS05645 IPR000089 Biotin/lipoyl attachment DM55_RS05645 IPR002930 Glycine cleavage system H-protein DM55_RS05650 IPR028896 Aminomethyltransferase-like DM55_RS05650 IPR022903 Glycine cleavage system T protein, bacteria DM55_RS05650 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain DM55_RS05650 IPR006222 Aminomethyltransferase, folate-binding domain DM55_RS05650 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DM55_RS05650 IPR006223 Glycine cleavage system T protein DM55_RS05650 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DM55_RS05660 IPR004104 Oxidoreductase, C-terminal DM55_RS05660 IPR000683 Oxidoreductase, N-terminal DM55_RS05660 IPR036291 NAD(P)-binding domain superfamily DM55_RS05675 IPR005752 ATP-dependent DNA helicase Rep DM55_RS05675 IPR000212 DNA helicase, UvrD/REP type DM55_RS05675 IPR014016 UvrD-like helicase, ATP-binding domain DM55_RS05675 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05675 IPR013986 DExx box DNA helicase domain superfamily DM55_RS05675 IPR034739 UvrD/AddA helicase, N-terminal DM55_RS05675 IPR014017 UvrD-like DNA helicase, C-terminal DM55_RS05680 IPR009056 Cytochrome c-like domain DM55_RS05680 IPR036909 Cytochrome c-like domain superfamily DM55_RS05680 IPR002323 Cytochrome c, class IE DM55_RS05690 IPR011010 DNA breaking-rejoining enzyme, catalytic core DM55_RS05690 IPR013762 Integrase-like, catalytic domain superfamily DM55_RS05690 IPR010998 Integrase/recombinase, N-terminal DM55_RS05690 IPR002104 Integrase, catalytic domain DM55_RS05700 IPR002514 Transposase IS3/IS911family DM55_RS05700 IPR009057 Homeobox-like domain superfamily DM55_RS05705 IPR019844 Cold-shock (CSD) domain DM55_RS05705 IPR012156 Cold shock, CspA DM55_RS05705 IPR012340 Nucleic acid-binding, OB-fold DM55_RS05705 IPR002059 Cold-shock protein, DNA-binding DM55_RS05705 IPR011129 Cold shock domain DM55_RS05715 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DM55_RS05715 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05715 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DM55_RS05720 IPR008258 Transglycosylase SLT domain 1 DM55_RS05720 IPR023346 Lysozyme-like domain superfamily DM55_RS05725 IPR013356 Type II secretion system GspD DM55_RS05725 IPR001775 GspD/PilQ family DM55_RS05725 IPR005644 NolW-like DM55_RS05725 IPR038591 NolW-like superfamily DM55_RS05725 IPR004846 Type II/III secretion system DM55_RS05730 IPR001482 Type II/IV secretion system protein DM55_RS05730 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05730 IPR003593 AAA+ ATPase domain DM55_RS05730 IPR013369 Type II secretion system GspE DM55_RS05730 IPR037257 General secretory system II, protein E, N-terminal superfamily DM55_RS05735 IPR001992 Type II secretion system conserved site DM55_RS05735 IPR003004 GspF/PilC family DM55_RS05735 IPR042094 Type II secretion system F domain superfamily DM55_RS05735 IPR011850 General secretion pathway protein F DM55_RS05735 IPR018076 Type II secretion system F domain DM55_RS05745 IPR010054 General secretion pathway protein G DM55_RS05745 IPR013545 Type II secretion system protein G DM55_RS05745 IPR012902 Prokaryotic N-terminal methylation site DM55_RS05745 IPR000983 Bacterial general secretion pathway protein G-type pilin DM55_RS05750 IPR002416 Type II secretion system protein H DM55_RS05750 IPR012902 Prokaryotic N-terminal methylation site DM55_RS05750 IPR022346 General secretion pathway, GspH DM55_RS05755 IPR010052 Type II secretion system protein I DM55_RS05755 IPR012902 Prokaryotic N-terminal methylation site DM55_RS05755 IPR003413 Type II secretion system protein I domain DM55_RS05765 IPR038072 GspK, central domain superfamily DM55_RS05765 IPR005628 General secretion pathway protein K DM55_RS05785 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DM55_RS05785 IPR003423 Outer membrane efflux protein DM55_RS05795 IPR000835 MarR-type HTH domain DM55_RS05795 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS05795 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS05805 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS05805 IPR000847 Transcription regulator HTH, LysR DM55_RS05805 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS05805 IPR005119 LysR, substrate-binding DM55_RS05810 IPR005538 LrgA/CidA family DM55_RS05810 IPR023760 Holin-like protein CidA DM55_RS05815 IPR007300 CidB/LrgB family DM55_RS05815 IPR024891 Antiholin-like protein LrgB DM55_RS05830 IPR001543 Surface presentation of antigen (SpoA) DM55_RS05830 IPR001689 Flagellar motor switch protein FliM DM55_RS05830 IPR028976 CheC-like superfamily DM55_RS05830 IPR036429 SpoA-like superfamily DM55_RS05835 IPR031576 Flagellar motor switch protein FliN, N-terminal DM55_RS05835 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb DM55_RS05835 IPR036429 SpoA-like superfamily DM55_RS05835 IPR012826 Flagellar motor switch FliN DM55_RS05835 IPR001543 Surface presentation of antigen (SpoA) DM55_RS05840 IPR022781 Flagellar biosynthesis protein, FliO DM55_RS05845 IPR005837 Flagellar transport protein FliP DM55_RS05845 IPR005838 Type III secretion system inner membrane P protein DM55_RS05850 IPR009057 Homeobox-like domain superfamily DM55_RS05850 IPR002514 Transposase IS3/IS911family DM55_RS05855 IPR036397 Ribonuclease H superfamily DM55_RS05855 IPR012337 Ribonuclease H-like superfamily DM55_RS05855 IPR025948 HTH-like domain DM55_RS05855 IPR001584 Integrase, catalytic core DM55_RS05875 IPR023606 CoA-transferase family III domain superfamily DM55_RS05875 IPR003673 CoA-transferase family III DM55_RS05880 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS05880 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS05880 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS05880 IPR012802 Fatty oxidation complex, alpha subunit FadJ DM55_RS05880 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS05880 IPR001753 Enoyl-CoA hydratase/isomerase DM55_RS05880 IPR036291 NAD(P)-binding domain superfamily DM55_RS05885 IPR020613 Thiolase, conserved site DM55_RS05885 IPR020617 Thiolase, C-terminal DM55_RS05885 IPR020610 Thiolase, active site DM55_RS05885 IPR020616 Thiolase, N-terminal DM55_RS05885 IPR020615 Thiolase, acyl-enzyme intermediate active site DM55_RS05885 IPR016039 Thiolase-like DM55_RS05885 IPR002155 Thiolase DM55_RS05890 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS05890 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS05890 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS05890 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS05890 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DM55_RS05890 IPR006089 Acyl-CoA dehydrogenase, conserved site DM55_RS05890 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS05915 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS05915 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS05915 IPR005149 Transcription regulator PadR, N-terminal DM55_RS05920 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS05920 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal DM55_RS05920 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal DM55_RS05920 IPR012132 Glucose-methanol-choline oxidoreductase DM55_RS05920 IPR027424 Glucose Oxidase, domain 2 DM55_RS05925 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS05925 IPR036291 NAD(P)-binding domain superfamily DM55_RS05925 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS05930 IPR035348 MoaF, C-terminal domain DM55_RS05930 IPR024724 Molybdenum cofactor biosynthesis protein F, N-terminal DM55_RS05940 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS05940 IPR015590 Aldehyde dehydrogenase domain DM55_RS05940 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS05940 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS05940 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS05940 IPR016160 Aldehyde dehydrogenase, cysteine active site DM55_RS05955 IPR001851 ABC transporter, permease DM55_RS05955 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal DM55_RS05960 IPR003439 ABC transporter-like DM55_RS05960 IPR003593 AAA+ ATPase domain DM55_RS05960 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DM55_RS05960 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05960 IPR017871 ABC transporter, conserved site DM55_RS05965 IPR003593 AAA+ ATPase domain DM55_RS05965 IPR003439 ABC transporter-like DM55_RS05965 IPR017871 ABC transporter, conserved site DM55_RS05965 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05965 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein DM55_RS05975 IPR002299 Porin, Neisseria sp. type DM55_RS05975 IPR001702 Porin, Gram-negative type DM55_RS05975 IPR023614 Porin domain superfamily DM55_RS05975 IPR033900 Porin domain, Gram-negative type DM55_RS05985 IPR006935 Helicase/UvrB, N-terminal DM55_RS05985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05985 IPR014883 VRR-NUC domain DM55_RS05990 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DM55_RS05990 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class DM55_RS05990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS05990 IPR002941 DNA methylase N-4/N-6 DM55_RS05990 IPR041405 Type III R-M EcoP15I, C-terminal DM55_RS05995 IPR033900 Porin domain, Gram-negative type DM55_RS05995 IPR023614 Porin domain superfamily DM55_RS05995 IPR002299 Porin, Neisseria sp. type DM55_RS05995 IPR001702 Porin, Gram-negative type DM55_RS06000 IPR039420 Transcriptional regulatory protein WalR-like DM55_RS06000 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS06000 IPR011006 CheY-like superfamily DM55_RS06000 IPR001789 Signal transduction response regulator, receiver domain DM55_RS06000 IPR001867 OmpR/PhoB-type DNA-binding domain DM55_RS06000 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS06005 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS06005 IPR005467 Histidine kinase domain DM55_RS06005 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS06005 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS06005 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS06005 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS06010 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS06010 IPR035906 MetI-like superfamily DM55_RS06015 IPR003593 AAA+ ATPase domain DM55_RS06015 IPR003439 ABC transporter-like DM55_RS06015 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06030 IPR004472 Dethiobiotin synthase BioD DM55_RS06030 IPR041698 Methyltransferase domain 25 DM55_RS06030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS06030 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06035 IPR000551 MerR-type HTH domain DM55_RS06035 IPR009061 Putative DNA-binding domain superfamily DM55_RS06035 IPR015358 Transcription regulator MerR, DNA binding DM55_RS06035 IPR010211 Redox-sensitive transcriptional activator SoxR DM55_RS06040 IPR006303 Flagellar biosynthesis protein FliR DM55_RS06040 IPR002010 Type III secretion system inner membrane R protein DM55_RS06045 IPR006305 Flagellar biosynthesis protein FliQ DM55_RS06045 IPR002191 Bacterial export protein family 3 DM55_RS06050 IPR005838 Type III secretion system inner membrane P protein DM55_RS06050 IPR005837 Flagellar transport protein FliP DM55_RS06055 IPR025948 HTH-like domain DM55_RS06055 IPR036397 Ribonuclease H superfamily DM55_RS06055 IPR012337 Ribonuclease H-like superfamily DM55_RS06055 IPR001584 Integrase, catalytic core DM55_RS06060 IPR009057 Homeobox-like domain superfamily DM55_RS06060 IPR002514 Transposase IS3/IS911family DM55_RS06075 IPR036760 SspB-like superfamily DM55_RS06075 IPR007481 Stringent starvation protein B DM55_RS06080 IPR034341 Stringent starvation protein A, N-terminal DM55_RS06080 IPR004046 Glutathione S-transferase, C-terminal DM55_RS06080 IPR004045 Glutathione S-transferase, N-terminal DM55_RS06080 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DM55_RS06080 IPR036249 Thioredoxin-like superfamily DM55_RS06080 IPR040079 Glutathione Transferase family DM55_RS06080 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS06085 IPR002326 Cytochrome c1 DM55_RS06085 IPR036909 Cytochrome c-like domain superfamily DM55_RS06085 IPR009056 Cytochrome c-like domain DM55_RS06090 IPR030689 Cytochrome b DM55_RS06090 IPR016174 Di-haem cytochrome, transmembrane DM55_RS06090 IPR027387 Cytochrome b/b6-like domain superfamily DM55_RS06090 IPR005798 Cytochrome b/b6, C-terminal DM55_RS06090 IPR005797 Cytochrome b/b6, N-terminal DM55_RS06090 IPR036150 Cytochrome b/b6, C-terminal domain superfamily DM55_RS06095 IPR014349 Rieske iron-sulphur protein DM55_RS06095 IPR005805 Rieske iron-sulphur protein, C-terminal DM55_RS06095 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal DM55_RS06095 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit DM55_RS06095 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DM55_RS06095 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DM55_RS06100 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DM55_RS06100 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DM55_RS06105 IPR001478 PDZ domain DM55_RS06105 IPR001940 Peptidase S1C DM55_RS06105 IPR041489 PDZ domain 6 DM55_RS06105 IPR036034 PDZ superfamily DM55_RS06105 IPR011782 Peptidase S1C, Do DM55_RS06105 IPR009003 Peptidase S1, PA clan DM55_RS06115 IPR002033 Sec-independent periplasmic protein translocase TatC DM55_RS06115 IPR019820 Sec-independent periplasmic protein translocase, conserved site DM55_RS06120 IPR003369 Sec-independent protein translocase protein TatA/B/E DM55_RS06120 IPR018448 Twin-arginine translocation protein TatB DM55_RS06125 IPR006312 Sec-independent protein translocase protein TatA/E DM55_RS06125 IPR003369 Sec-independent protein translocase protein TatA/B/E DM55_RS06130 IPR011146 HIT-like domain DM55_RS06130 IPR036265 HIT-like superfamily DM55_RS06130 IPR019808 Histidine triad, conserved site DM55_RS06130 IPR001310 Histidine triad (HIT) protein DM55_RS06140 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like DM55_RS06140 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase DM55_RS06145 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily DM55_RS06145 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain DM55_RS06145 IPR026660 Phosphoribosyl-AMP cyclohydrolase DM55_RS06150 IPR011060 Ribulose-phosphate binding barrel DM55_RS06150 IPR004651 Histidine biosynthesis, HisF DM55_RS06150 IPR013785 Aldolase-type TIM barrel DM55_RS06150 IPR006062 Histidine biosynthesis DM55_RS06155 IPR011060 Ribulose-phosphate binding barrel DM55_RS06155 IPR013785 Aldolase-type TIM barrel DM55_RS06155 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase DM55_RS06155 IPR006062 Histidine biosynthesis DM55_RS06155 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA DM55_RS06160 IPR010139 Imidazole glycerol phosphate synthase, subunit H DM55_RS06160 IPR017926 Glutamine amidotransferase DM55_RS06160 IPR029062 Class I glutamine amidotransferase-like DM55_RS06165 IPR002771 Multiple antibiotic resistance (MarC)-related DM55_RS06170 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS06170 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site DM55_RS06170 IPR000807 Imidazoleglycerol-phosphate dehydratase DM55_RS06170 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily DM55_RS06175 IPR005861 Histidinol-phosphate aminotransferase family DM55_RS06175 IPR004839 Aminotransferase, class I/classII DM55_RS06175 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS06175 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS06175 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS06180 IPR001692 Histidinol dehydrogenase, conserved site DM55_RS06180 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS06180 IPR022695 Histidinol dehydrogenase, monofunctional DM55_RS06180 IPR012131 Histidinol dehydrogenase DM55_RS06185 IPR018198 ATP phosphoribosyltransferase, conserved site DM55_RS06185 IPR013820 ATP phosphoribosyltransferase, catalytic domain DM55_RS06185 IPR024893 ATP phosphoribosyltransferase HisG, short form DM55_RS06185 IPR001348 ATP phosphoribosyltransferase HisG DM55_RS06190 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase DM55_RS06190 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DM55_RS06190 IPR036968 Enolpyruvate transferase domain superfamily DM55_RS06190 IPR001986 Enolpyruvate transferase domain DM55_RS06200 IPR000412 ABC-2 transporter DM55_RS06200 IPR013525 ABC-2 type transporter DM55_RS06205 IPR003439 ABC transporter-like DM55_RS06205 IPR003593 AAA+ ATPase domain DM55_RS06205 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06205 IPR017871 ABC transporter, conserved site DM55_RS06225 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD DM55_RS06225 IPR003399 Mce/MlaD DM55_RS06230 IPR030802 ABC transporter permease MalE DM55_RS06230 IPR003453 ABC transport permease subunit MlaE, Proteobacteria DM55_RS06235 IPR003439 ABC transporter-like DM55_RS06235 IPR017871 ABC transporter, conserved site DM55_RS06235 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl DM55_RS06235 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06235 IPR003593 AAA+ ATPase domain DM55_RS06240 IPR013785 Aldolase-type TIM barrel DM55_RS06240 IPR036206 Thiamin phosphate synthase superfamily DM55_RS06240 IPR034291 Thiamine phosphate synthase DM55_RS06240 IPR022998 Thiamine phosphate synthase/TenI DM55_RS06245 IPR013785 Aldolase-type TIM barrel DM55_RS06245 IPR008867 Thiazole synthase DM55_RS06245 IPR033983 Thiazole synthase ThiG DM55_RS06255 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS06255 IPR006076 FAD dependent oxidoreductase DM55_RS06255 IPR012727 Glycine oxidase ThiO DM55_RS06255 IPR023209 D-amino-acid oxidase DM55_RS06260 IPR003439 ABC transporter-like DM55_RS06260 IPR017871 ABC transporter, conserved site DM55_RS06260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06260 IPR036640 ABC transporter type 1, transmembrane domain superfamily DM55_RS06260 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS06260 IPR003593 AAA+ ATPase domain DM55_RS06270 IPR001463 Sodium:alanine symporter DM55_RS06275 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 DM55_RS06275 IPR028261 Dihydroprymidine dehydrogenase domain II DM55_RS06275 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS06275 IPR023753 FAD/NAD(P)-binding domain DM55_RS06275 IPR009051 Alpha-helical ferredoxin DM55_RS06280 IPR002489 Glutamate synthase, alpha subunit, C-terminal DM55_RS06280 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS06280 IPR002932 Glutamate synthase domain DM55_RS06280 IPR006982 Glutamate synthase, central-N DM55_RS06280 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily DM55_RS06280 IPR017932 Glutamine amidotransferase type 2 domain DM55_RS06280 IPR013785 Aldolase-type TIM barrel DM55_RS06295 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily DM55_RS06295 IPR030395 Glycerophosphodiester phosphodiesterase domain DM55_RS06300 IPR003439 ABC transporter-like DM55_RS06300 IPR040582 MalK, OB fold domain DM55_RS06300 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06300 IPR017871 ABC transporter, conserved site DM55_RS06300 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS06300 IPR003593 AAA+ ATPase domain DM55_RS06300 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC DM55_RS06305 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS06305 IPR035906 MetI-like superfamily DM55_RS06305 IPR030165 sn-Glycerol-3-phosphate transport system permease protein UgpE DM55_RS06310 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS06310 IPR035906 MetI-like superfamily DM55_RS06315 IPR006059 Bacterial extracellular solute-binding protein DM55_RS06315 IPR006061 Solute-binding family 1, conserved site DM55_RS06320 IPR023023 dNTP triphosphohydrolase, type 2 DM55_RS06320 IPR006674 HD domain DM55_RS06320 IPR026875 Phosphohydrolase-associated domain DM55_RS06320 IPR006261 dNTP triphosphohydrolase DM55_RS06320 IPR003607 HD/PDEase domain DM55_RS06325 IPR030960 3-dehydroquinate synthase domain DM55_RS06325 IPR030963 3-dehydroquinate synthase family DM55_RS06325 IPR016037 3-dehydroquinate synthase AroB DM55_RS06330 IPR023000 Shikimate kinase, conserved site DM55_RS06330 IPR000623 Shikimate kinase/Threonine synthase-like 1 DM55_RS06330 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06330 IPR031322 Shikimate kinase/gluconokinase DM55_RS06335 IPR021731 AMIN domain DM55_RS06335 IPR004845 Type II secretion system GspD, conserved site DM55_RS06335 IPR004846 Type II/III secretion system DM55_RS06335 IPR011662 Secretin/TonB, short N-terminal domain DM55_RS06335 IPR013355 Type IV pilus secretin PilQ DM55_RS06335 IPR038591 NolW-like superfamily DM55_RS06335 IPR005644 NolW-like DM55_RS06335 IPR001775 GspD/PilQ family DM55_RS06355 IPR001264 Glycosyl transferase, family 51 DM55_RS06355 IPR001460 Penicillin-binding protein, transpeptidase DM55_RS06355 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS06355 IPR036950 Penicillin binding protein transglycosylase domain DM55_RS06355 IPR023346 Lysozyme-like domain superfamily DM55_RS06355 IPR031376 Penicillin-binding protein, OB-like domain DM55_RS06365 IPR002908 Frataxin/CyaY DM55_RS06365 IPR036524 Frataxin/CyaY superfamily DM55_RS06365 IPR020895 Frataxin conserved site DM55_RS06375 IPR000183 Ornithine/DAP/Arg decarboxylase DM55_RS06375 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site DM55_RS06375 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DM55_RS06375 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal DM55_RS06375 IPR002986 Diaminopimelate decarboxylase, LysA DM55_RS06375 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DM55_RS06375 IPR029066 PLP-binding barrel DM55_RS06380 IPR013130 Ferric reductase transmembrane component-like domain DM55_RS06380 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ DM55_RS06385 IPR000572 Oxidoreductase, molybdopterin-binding domain DM55_RS06385 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily DM55_RS06385 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP DM55_RS06385 IPR006311 Twin-arginine translocation pathway, signal sequence DM55_RS06390 IPR001584 Integrase, catalytic core DM55_RS06390 IPR025948 HTH-like domain DM55_RS06390 IPR036397 Ribonuclease H superfamily DM55_RS06390 IPR012337 Ribonuclease H-like superfamily DM55_RS06395 IPR002514 Transposase IS3/IS911family DM55_RS06395 IPR009057 Homeobox-like domain superfamily DM55_RS06415 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DM55_RS06415 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DM55_RS06415 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS06415 IPR000795 Transcription factor, GTP-binding domain DM55_RS06415 IPR005225 Small GTP-binding protein domain DM55_RS06415 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06415 IPR031157 Tr-type G domain, conserved site DM55_RS06415 IPR033720 Elongation factor Tu, domain 2 DM55_RS06415 IPR004161 Translation elongation factor EFTu-like, domain 2 DM55_RS06415 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DM55_RS06415 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain DM55_RS06425 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit DM55_RS06425 IPR038379 SecE superfamily DM55_RS06425 IPR005807 SecE subunit of protein translocation complex, bacterial-like DM55_RS06430 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DM55_RS06430 IPR001062 Transcription antitermination protein, NusG DM55_RS06430 IPR014722 Ribosomal protein L2, domain 2 DM55_RS06430 IPR036735 NusG, N-terminal domain superfamily DM55_RS06430 IPR006645 NusG, N-terminal DM55_RS06430 IPR005824 KOW DM55_RS06430 IPR008991 Translation protein SH3-like domain superfamily DM55_RS06435 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DM55_RS06435 IPR006519 Ribosomal protein L11, bacterial-type DM55_RS06435 IPR020784 Ribosomal protein L11, N-terminal DM55_RS06435 IPR020783 Ribosomal protein L11, C-terminal DM55_RS06435 IPR020785 Ribosomal protein L11, conserved site DM55_RS06435 IPR000911 Ribosomal protein L11/L12 DM55_RS06435 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DM55_RS06440 IPR023673 Ribosomal protein L1, conserved site DM55_RS06440 IPR005878 Ribosomal protein L1, bacterial-type DM55_RS06440 IPR002143 Ribosomal protein L1 DM55_RS06440 IPR023674 Ribosomal protein L1-like DM55_RS06440 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DM55_RS06440 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DM55_RS06445 IPR001790 Ribosomal protein L10P DM55_RS06445 IPR022973 Ribosomal protein L10 DM55_RS06450 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DM55_RS06450 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily DM55_RS06450 IPR008932 Ribosomal protein L7/L12, oligomerisation DM55_RS06450 IPR013823 Ribosomal protein L7/L12, C-terminal DM55_RS06450 IPR000206 Ribosomal protein L7/L12 DM55_RS06455 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain DM55_RS06455 IPR015712 DNA-directed RNA polymerase, subunit 2 DM55_RS06455 IPR007645 RNA polymerase Rpb2, domain 3 DM55_RS06455 IPR037034 RNA polymerase Rpb2, domain 2 superfamily DM55_RS06455 IPR007644 RNA polymerase, beta subunit, protrusion DM55_RS06455 IPR007642 RNA polymerase Rpb2, domain 2 DM55_RS06455 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily DM55_RS06455 IPR007121 RNA polymerase, beta subunit, conserved site DM55_RS06455 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type DM55_RS06455 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily DM55_RS06455 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain DM55_RS06455 IPR007641 RNA polymerase Rpb2, domain 7 DM55_RS06455 IPR014724 RNA polymerase Rpb2, OB-fold DM55_RS06460 IPR007083 RNA polymerase Rpb1, domain 4 DM55_RS06460 IPR012754 DNA-directed RNA polymerase, subunit beta-prime DM55_RS06460 IPR038120 RNA polymerase Rpb1, funnel domain superfamily DM55_RS06460 IPR006592 RNA polymerase, N-terminal DM55_RS06460 IPR007080 RNA polymerase Rpb1, domain 1 DM55_RS06460 IPR007066 RNA polymerase Rpb1, domain 3 DM55_RS06460 IPR042102 RNA polymerase Rpb1, domain 3 superfamily DM55_RS06460 IPR007081 RNA polymerase Rpb1, domain 5 DM55_RS06460 IPR000722 RNA polymerase, alpha subunit DM55_RS06470 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06470 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial DM55_RS06470 IPR011545 DEAD/DEAH box helicase domain DM55_RS06470 IPR004589 DNA helicase, ATP-dependent, RecQ type DM55_RS06470 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS06470 IPR014001 Helicase superfamily 1/2, ATP-binding domain DM55_RS06470 IPR001650 Helicase, C-terminal DM55_RS06470 IPR002121 HRDC domain DM55_RS06470 IPR010997 HRDC-like superfamily DM55_RS06470 IPR018982 RQC domain DM55_RS06470 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DM55_RS06475 IPR006032 Ribosomal protein S12/S23 DM55_RS06475 IPR005679 Ribosomal protein S12, bacterial-type DM55_RS06475 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06480 IPR023798 Ribosomal protein S7 domain DM55_RS06480 IPR020606 Ribosomal protein S7, conserved site DM55_RS06480 IPR005717 Ribosomal protein S7, bacterial/organellar-type DM55_RS06480 IPR036823 Ribosomal protein S7 domain superfamily DM55_RS06480 IPR000235 Ribosomal protein S5/S7 DM55_RS06485 IPR035647 EF-G domain III/V-like DM55_RS06485 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS06485 IPR004540 Translation elongation factor EFG/EF2 DM55_RS06485 IPR000795 Transcription factor, GTP-binding domain DM55_RS06485 IPR005225 Small GTP-binding protein domain DM55_RS06485 IPR041095 Elongation Factor G, domain II DM55_RS06485 IPR009022 Elongation factor G, domain III DM55_RS06485 IPR035649 EFG, domain V DM55_RS06485 IPR000640 Elongation factor EFG, domain V-like DM55_RS06485 IPR004161 Translation elongation factor EFTu-like, domain 2 DM55_RS06485 IPR031157 Tr-type G domain, conserved site DM55_RS06485 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06485 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS06485 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS06485 IPR005517 Translation elongation factor EFG/EF2, domain IV DM55_RS06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06490 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain DM55_RS06490 IPR004161 Translation elongation factor EFTu-like, domain 2 DM55_RS06490 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DM55_RS06490 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS06490 IPR000795 Transcription factor, GTP-binding domain DM55_RS06490 IPR005225 Small GTP-binding protein domain DM55_RS06490 IPR033720 Elongation factor Tu, domain 2 DM55_RS06490 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DM55_RS06490 IPR031157 Tr-type G domain, conserved site DM55_RS06490 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DM55_RS06495 IPR018268 Ribosomal protein S10, conserved site DM55_RS06495 IPR001848 Ribosomal protein S10 DM55_RS06495 IPR027486 Ribosomal protein S10 domain DM55_RS06495 IPR036838 Ribosomal protein S10 domain superfamily DM55_RS06500 IPR019926 Ribosomal protein L3, conserved site DM55_RS06500 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS06500 IPR019927 Ribosomal protein L3, bacterial/organelle-type DM55_RS06500 IPR000597 Ribosomal protein L3 DM55_RS06505 IPR013005 50S ribosomal protein uL4 DM55_RS06505 IPR002136 Ribosomal protein L4/L1e DM55_RS06505 IPR023574 Ribosomal protein L4 domain superfamily DM55_RS06510 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DM55_RS06510 IPR012678 Ribosomal protein L23/L15e core domain superfamily DM55_RS06510 IPR013025 Ribosomal protein L25/L23 DM55_RS06515 IPR002171 Ribosomal protein L2 DM55_RS06515 IPR022666 Ribosomal Proteins L2, RNA binding domain DM55_RS06515 IPR005880 Ribosomal protein L2, bacterial/organellar-type DM55_RS06515 IPR014722 Ribosomal protein L2, domain 2 DM55_RS06515 IPR008991 Translation protein SH3-like domain superfamily DM55_RS06515 IPR014726 Ribosomal protein L2, domain 3 DM55_RS06515 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06515 IPR022669 Ribosomal protein L2, C-terminal DM55_RS06515 IPR022671 Ribosomal protein L2, conserved site DM55_RS06520 IPR020934 Ribosomal protein S19 conserved site DM55_RS06520 IPR023575 Ribosomal protein S19, superfamily DM55_RS06520 IPR005732 Ribosomal protein S19, bacterial-type DM55_RS06520 IPR002222 Ribosomal protein S19/S15 DM55_RS06525 IPR001063 Ribosomal protein L22/L17 DM55_RS06525 IPR018260 Ribosomal protein L22/L17, conserved site DM55_RS06525 IPR036394 Ribosomal protein L22/L17 superfamily DM55_RS06525 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type DM55_RS06530 IPR001351 Ribosomal protein S3, C-terminal DM55_RS06530 IPR036419 Ribosomal protein S3, C-terminal domain superfamily DM55_RS06530 IPR018280 Ribosomal protein S3, conserved site DM55_RS06530 IPR004044 K Homology domain, type 2 DM55_RS06530 IPR004087 K Homology domain DM55_RS06530 IPR015946 K homology domain-like, alpha/beta DM55_RS06530 IPR009019 K homology domain superfamily, prokaryotic type DM55_RS06530 IPR005704 Ribosomal protein S3, bacterial-type DM55_RS06535 IPR000114 Ribosomal protein L16 DM55_RS06535 IPR020798 Ribosomal protein L16, conserved site DM55_RS06535 IPR016180 Ribosomal protein L10e/L16 DM55_RS06535 IPR036920 Ribosomal protein L10e/L16 superfamily DM55_RS06540 IPR036049 Ribosomal protein L29/L35 superfamily DM55_RS06540 IPR018254 Ribosomal protein L29, conserved site DM55_RS06540 IPR001854 Ribosomal protein L29/L35 DM55_RS06545 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06545 IPR000266 Ribosomal protein S17/S11 DM55_RS06545 IPR019979 Ribosomal protein S17, conserved site DM55_RS06545 IPR019984 30S ribosomal protein S17 DM55_RS06550 IPR019972 Ribosomal protein L14P, conserved site DM55_RS06550 IPR000218 Ribosomal protein L14P DM55_RS06550 IPR036853 Ribosomal protein L14 superfamily DM55_RS06550 IPR005745 Ribosomal protein L14P, bacterial-type DM55_RS06555 IPR014722 Ribosomal protein L2, domain 2 DM55_RS06555 IPR003256 Ribosomal protein L24 DM55_RS06555 IPR041988 Ribosomal Protein L26/L24, KOW domain DM55_RS06555 IPR005825 Ribosomal protein L24/L26, conserved site DM55_RS06555 IPR008991 Translation protein SH3-like domain superfamily DM55_RS06560 IPR020930 Ribosomal protein L5, bacterial-type DM55_RS06560 IPR031310 Ribosomal protein L5, N-terminal DM55_RS06560 IPR020929 Ribosomal protein L5, conserved site DM55_RS06560 IPR022803 Ribosomal protein L5 domain superfamily DM55_RS06560 IPR002132 Ribosomal protein L5 DM55_RS06560 IPR031309 Ribosomal protein L5, C-terminal DM55_RS06565 IPR023036 Ribosomal protein S14, bacterial/plastid DM55_RS06565 IPR001209 Ribosomal protein S14 DM55_RS06570 IPR035987 Ribosomal protein S8 superfamily DM55_RS06570 IPR000630 Ribosomal protein S8 DM55_RS06575 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily DM55_RS06575 IPR020040 Ribosomal protein L6, alpha-beta domain DM55_RS06575 IPR019906 Ribosomal protein L6, bacterial-type DM55_RS06575 IPR002358 Ribosomal protein L6, conserved site DM55_RS06575 IPR000702 Ribosomal protein L6 DM55_RS06580 IPR005484 Ribosomal protein L18 DM55_RS06580 IPR004389 Ribosomal protein L18, bacterial-type DM55_RS06585 IPR005324 Ribosomal protein S5, C-terminal DM55_RS06585 IPR005712 Ribosomal protein S5, bacterial-type DM55_RS06585 IPR000851 Ribosomal protein S5 DM55_RS06585 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS06585 IPR013810 Ribosomal protein S5, N-terminal DM55_RS06585 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS06585 IPR018192 Ribosomal protein S5, N-terminal, conserved site DM55_RS06590 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DM55_RS06590 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DM55_RS06590 IPR005996 Ribosomal protein L30, bacterial-type DM55_RS06595 IPR036227 Ribosomal L18e/L15P superfamily DM55_RS06595 IPR030878 Ribosomal protein L15 DM55_RS06595 IPR005749 Ribosomal protein L15, bacterial-type DM55_RS06595 IPR001196 Ribosomal protein L15, conserved site DM55_RS06595 IPR021131 Ribosomal protein L18e/L15P DM55_RS06600 IPR026593 Protein translocase subunit SecY DM55_RS06600 IPR002208 SecY/SEC61-alpha family DM55_RS06600 IPR030659 SecY conserved site DM55_RS06600 IPR023201 SecY domain superfamily DM55_RS06605 IPR022967 RNA-binding domain, S1 DM55_RS06605 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06605 IPR006196 RNA-binding domain, S1, IF1 type DM55_RS06605 IPR004368 Translation initiation factor IF-1 DM55_RS06610 IPR000473 Ribosomal protein L36 DM55_RS06610 IPR035977 Ribosomal protein L36 superfamily DM55_RS06615 IPR010979 Ribosomal protein S13-like, H2TH DM55_RS06615 IPR018269 Ribosomal protein S13, conserved site DM55_RS06615 IPR027437 30s ribosomal protein S13, C-terminal DM55_RS06615 IPR001892 Ribosomal protein S13 DM55_RS06615 IPR019980 Ribosomal protein S13, bacterial-type DM55_RS06620 IPR036967 Ribosomal protein S11 superfamily DM55_RS06620 IPR018102 Ribosomal S11, conserved site DM55_RS06620 IPR019981 Ribosomal protein S11, bacterial-type DM55_RS06620 IPR001971 Ribosomal protein S11 DM55_RS06625 IPR036986 RNA-binding S4 domain superfamily DM55_RS06625 IPR005709 Ribosomal protein S4, bacterial-type DM55_RS06625 IPR022801 Ribosomal protein S4/S9 DM55_RS06625 IPR002942 RNA-binding S4 domain DM55_RS06625 IPR018079 Ribosomal protein S4, conserved site DM55_RS06625 IPR001912 Ribosomal protein S4/S9, N-terminal DM55_RS06630 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type DM55_RS06630 IPR011262 DNA-directed RNA polymerase, insert domain DM55_RS06630 IPR011773 DNA-directed RNA polymerase, alpha subunit DM55_RS06630 IPR036603 RNA polymerase, RBP11-like subunit DM55_RS06630 IPR011260 RNA polymerase, alpha subunit, C-terminal DM55_RS06630 IPR036643 DNA-directed RNA polymerase, insert domain superfamily DM55_RS06635 IPR000456 Ribosomal protein L17 DM55_RS06635 IPR036373 Ribosomal protein L17 superfamily DM55_RS06645 IPR013766 Thioredoxin domain DM55_RS06645 IPR003834 Cytochrome C biogenesis protein, transmembrane domain DM55_RS06645 IPR017937 Thioredoxin, conserved site DM55_RS06645 IPR036249 Thioredoxin-like superfamily DM55_RS06645 IPR022910 Thiol:disulphide interchange protein DsbD DM55_RS06645 IPR035671 DsbD gamma DM55_RS06645 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DM55_RS06645 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DM55_RS06650 IPR030656 Delta-aminolevulinic acid dehydratase, active site DM55_RS06650 IPR001731 Delta-aminolevulinic acid dehydratase DM55_RS06650 IPR013785 Aldolase-type TIM barrel DM55_RS06655 IPR030393 EngB-type guanine nucleotide-binding (G) domain DM55_RS06655 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06655 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC DM55_RS06655 IPR006073 GTP binding domain DM55_RS06660 IPR036909 Cytochrome c-like domain superfamily DM55_RS06660 IPR024167 Cytochrome c4-like DM55_RS06660 IPR009056 Cytochrome c-like domain DM55_RS06665 IPR023494 Cytochrome c biogenesis protein Ccs1/CcsB DM55_RS06665 IPR007816 ResB-like domain DM55_RS06670 IPR017562 Cytochrome c-type biogenesis protein CcsA DM55_RS06670 IPR002541 Cytochrome c assembly protein DM55_RS06675 IPR002514 Transposase IS3/IS911family DM55_RS06675 IPR009057 Homeobox-like domain superfamily DM55_RS06680 IPR036397 Ribonuclease H superfamily DM55_RS06680 IPR025948 HTH-like domain DM55_RS06680 IPR001584 Integrase, catalytic core DM55_RS06680 IPR012337 Ribonuclease H-like superfamily DM55_RS06690 IPR005618 Outer membrane protein, OmpW DM55_RS06690 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DM55_RS06705 IPR036291 NAD(P)-binding domain superfamily DM55_RS06705 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 DM55_RS06705 IPR000534 Semialdehyde dehydrogenase, NAD-binding DM55_RS06710 IPR029039 Flavoprotein-like superfamily DM55_RS06710 IPR008254 Flavodoxin/nitric oxide synthase DM55_RS06710 IPR005025 NADPH-dependent FMN reductase-like DM55_RS06715 IPR008914 Phosphatidylethanolamine-binding protein DM55_RS06715 IPR036610 PEBP-like superfamily DM55_RS06715 IPR005247 YbhB/YbcL DM55_RS06720 IPR004467 Orotate phosphoribosyl transferase domain DM55_RS06720 IPR029057 Phosphoribosyltransferase-like DM55_RS06720 IPR023031 Orotate phosphoribosyltransferase DM55_RS06720 IPR000836 Phosphoribosyltransferase domain DM55_RS06725 IPR042112 Phosphate acetyltransferase, domain 2 DM55_RS06725 IPR042113 Phosphate acetyltransferase, domain 1 DM55_RS06725 IPR036291 NAD(P)-binding domain superfamily DM55_RS06725 IPR002505 Phosphate acetyl/butaryl transferase DM55_RS06725 IPR012302 Malic enzyme, NAD-binding DM55_RS06725 IPR012188 NAD(P)-dependent malic enzyme DM55_RS06725 IPR037062 Malic enzyme, N-terminal domain superfamily DM55_RS06725 IPR012301 Malic enzyme, N-terminal domain DM55_RS06725 IPR015884 Malic enzyme, conserved site DM55_RS06750 IPR002514 Transposase IS3/IS911family DM55_RS06750 IPR009057 Homeobox-like domain superfamily DM55_RS06785 IPR012347 Ferritin-like DM55_RS06785 IPR009078 Ferritin-like superfamily DM55_RS06785 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A DM55_RS06785 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C DM55_RS06790 IPR038693 Phenylacetyl-CoA epoxidase, subunit B DM55_RS06790 IPR009359 Phenylacetic acid degradation B DM55_RS06795 IPR012347 Ferritin-like DM55_RS06795 IPR009078 Ferritin-like superfamily DM55_RS06795 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C DM55_RS06795 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C DM55_RS06800 IPR034904 Fe-S cluster assembly domain superfamily DM55_RS06800 IPR002744 MIP18 family-like DM55_RS06800 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit DM55_RS06805 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS06805 IPR001433 Oxidoreductase FAD/NAD(P)-binding DM55_RS06805 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit DM55_RS06805 IPR036010 2Fe-2S ferredoxin-like superfamily DM55_RS06805 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DM55_RS06805 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DM55_RS06805 IPR012675 Beta-grasp domain superfamily DM55_RS06805 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DM55_RS06805 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DM55_RS06805 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DM55_RS06805 IPR017927 FAD-binding domain, ferredoxin reductase-type DM55_RS06815 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS06815 IPR009057 Homeobox-like domain superfamily DM55_RS06815 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal DM55_RS06815 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DM55_RS06825 IPR000485 AsnC-type HTH domain DM55_RS06825 IPR011008 Dimeric alpha-beta barrel DM55_RS06825 IPR019888 Transcription regulator AsnC-type DM55_RS06825 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DM55_RS06825 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DM55_RS06825 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS06825 IPR011991 ArsR-like helix-turn-helix domain DM55_RS06825 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS06830 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal DM55_RS06830 IPR005956 4-hydroxyphenylpyruvate dioxygenase DM55_RS06830 IPR037523 Vicinal oxygen chelate (VOC) domain DM55_RS06830 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DM55_RS06830 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DM55_RS06830 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal DM55_RS06840 IPR023950 Flavohemoprotein DM55_RS06840 IPR012292 Globin/Protoglobin DM55_RS06840 IPR009050 Globin-like superfamily DM55_RS06840 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS06840 IPR000971 Globin DM55_RS06840 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DM55_RS06840 IPR017927 FAD-binding domain, ferredoxin reductase-type DM55_RS06840 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DM55_RS06840 IPR001433 Oxidoreductase FAD/NAD(P)-binding DM55_RS06845 IPR016030 Cobalamin adenosyltransferase-like DM55_RS06845 IPR036451 Cobalamin adenosyltransferase-like superfamily DM55_RS06845 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type DM55_RS06850 IPR006094 FAD linked oxidase, N-terminal DM55_RS06850 IPR004490 Glycolate oxidase subunit GlcD DM55_RS06850 IPR004113 FAD-linked oxidase, C-terminal DM55_RS06850 IPR016164 FAD-linked oxidase-like, C-terminal DM55_RS06850 IPR016166 FAD-binding domain, PCMH-type DM55_RS06850 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DM55_RS06850 IPR036318 FAD-binding, type PCMH-like superfamily DM55_RS06855 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DM55_RS06855 IPR006094 FAD linked oxidase, N-terminal DM55_RS06855 IPR004490 Glycolate oxidase subunit GlcD DM55_RS06855 IPR004113 FAD-linked oxidase, C-terminal DM55_RS06855 IPR016164 FAD-linked oxidase-like, C-terminal DM55_RS06855 IPR036318 FAD-binding, type PCMH-like superfamily DM55_RS06855 IPR016166 FAD-binding domain, PCMH-type DM55_RS06860 IPR016166 FAD-binding domain, PCMH-type DM55_RS06860 IPR036318 FAD-binding, type PCMH-like superfamily DM55_RS06860 IPR016169 FAD-binding, type PCMH, subdomain 2 DM55_RS06860 IPR016164 FAD-linked oxidase-like, C-terminal DM55_RS06860 IPR006094 FAD linked oxidase, N-terminal DM55_RS06865 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS06865 IPR004017 Cysteine-rich domain DM55_RS06865 IPR012257 Glycolate oxidase, iron-sulphur subunit DM55_RS06865 IPR009051 Alpha-helical ferredoxin DM55_RS06865 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS06870 IPR011078 Pyridoxal phosphate homeostasis protein DM55_RS06870 IPR001608 Alanine racemase, N-terminal DM55_RS06870 IPR029066 PLP-binding barrel DM55_RS06875 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS06875 IPR000304 Pyrroline-5-carboxylate reductase DM55_RS06875 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DM55_RS06875 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain DM55_RS06875 IPR036291 NAD(P)-binding domain superfamily DM55_RS06880 IPR035906 MetI-like superfamily DM55_RS06880 IPR005769 ABC transporter, permease PhnE/PtxC DM55_RS06880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS06890 IPR017797 Phosphonate ABC transporter, substrate-binding protein DM55_RS06890 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein DM55_RS06895 IPR003593 AAA+ ATPase domain DM55_RS06895 IPR017871 ABC transporter, conserved site DM55_RS06895 IPR012693 ABC transporter, phosphonate import, PhnC DM55_RS06895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06895 IPR003439 ABC transporter-like DM55_RS06900 IPR012696 Phosphonate metabolism PhnM DM55_RS06900 IPR032466 Metal-dependent hydrolase DM55_RS06900 IPR011059 Metal-dependent hydrolase, composite domain superfamily DM55_RS06900 IPR013108 Amidohydrolase 3 DM55_RS06905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06905 IPR012701 Phosphonate C-P lyase system, PhnL DM55_RS06905 IPR017871 ABC transporter, conserved site DM55_RS06905 IPR003439 ABC transporter-like DM55_RS06905 IPR003593 AAA+ ATPase domain DM55_RS06910 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06910 IPR003593 AAA+ ATPase domain DM55_RS06910 IPR003439 ABC transporter-like DM55_RS06910 IPR017871 ABC transporter, conserved site DM55_RS06910 IPR012700 Phosphonate C-P lyase system, PhnK DM55_RS06915 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase DM55_RS06920 IPR008773 Phosphonate metabolism protein PhnI DM55_RS06930 IPR009609 Phosphonate metabolism PhnG DM55_RS06935 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS06935 IPR000524 Transcription regulator HTH, GntR DM55_RS06935 IPR011663 UbiC transcription regulator-associated DM55_RS06935 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF DM55_RS06935 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DM55_RS06935 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS06940 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06940 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN DM55_RS06940 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DM55_RS06940 IPR009389 Protein of unknown function DUF1045 DM55_RS06945 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN DM55_RS06945 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06945 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DM55_RS06950 IPR039653 Prenyltransferase DM55_RS06950 IPR000537 UbiA prenyltransferase family DM55_RS06950 IPR030470 UbiA prenyltransferase conserved site DM55_RS06950 IPR006370 4-hydroxybenzoate polyprenyltransferase-like DM55_RS06955 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS06955 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS06955 IPR011991 ArsR-like helix-turn-helix domain DM55_RS06955 IPR002577 Helix-turn-helix, HxlR type DM55_RS06965 IPR002177 DNA-binding protein Dps DM55_RS06965 IPR008331 Ferritin/DPS protein domain DM55_RS06965 IPR009078 Ferritin-like superfamily DM55_RS06965 IPR012347 Ferritin-like DM55_RS06965 IPR023188 DNA-binding protein Dps, conserved site DM55_RS06975 IPR002016 Haem peroxidase DM55_RS06975 IPR010255 Haem peroxidase superfamily DM55_RS06975 IPR000763 Catalase-peroxidase haem DM55_RS06975 IPR019793 Peroxidases heam-ligand binding site DM55_RS06975 IPR019794 Peroxidase, active site DM55_RS06980 IPR000847 Transcription regulator HTH, LysR DM55_RS06980 IPR005119 LysR, substrate-binding DM55_RS06980 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS06980 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS06985 IPR014001 Helicase superfamily 1/2, ATP-binding domain DM55_RS06985 IPR033454 RecG, wedge domain DM55_RS06985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06985 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06985 IPR001650 Helicase, C-terminal DM55_RS06985 IPR004609 ATP-dependent DNA helicase RecG DM55_RS06985 IPR011545 DEAD/DEAH box helicase domain DM55_RS06990 IPR042119 QueA, domain 2 DM55_RS06990 IPR042118 QueA, domain 1 DM55_RS06990 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily DM55_RS06990 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA DM55_RS06995 IPR004803 tRNA-guanine transglycosylase DM55_RS06995 IPR002616 tRNA-guanine(15) transglycosylase-like DM55_RS06995 IPR036511 Queuine tRNA-ribosyltransferase-like DM55_RS07000 IPR003849 Preprotein translocase YajC DM55_RS07005 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DM55_RS07005 IPR001036 Acriflavin resistance protein DM55_RS07005 IPR005791 Protein translocase subunit SecD DM55_RS07005 IPR027398 SecD export protein N-terminal TM domain DM55_RS07005 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DM55_RS07005 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DM55_RS07010 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DM55_RS07010 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DM55_RS07010 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DM55_RS07010 IPR005665 Protein-export membrane protein SecF, bacterial DM55_RS07015 IPR005829 Sugar transporter, conserved site DM55_RS07015 IPR004736 MFS transporter, metabolite:H symporter DM55_RS07015 IPR036259 MFS transporter superfamily DM55_RS07015 IPR020846 Major facilitator superfamily domain DM55_RS07015 IPR011701 Major facilitator superfamily DM55_RS07020 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DM55_RS07020 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DM55_RS07020 IPR023480 Uncharacterised protein family UPF0312/YceI DM55_RS07025 IPR023480 Uncharacterised protein family UPF0312/YceI DM55_RS07025 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily DM55_RS07025 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DM55_RS07040 IPR007498 Intermembrane transport protein PqiA-like DM55_RS07040 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type DM55_RS07045 IPR003399 Mce/MlaD DM55_RS07060 IPR004114 THUMP domain DM55_RS07060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS07060 IPR000241 Putative RNA methylase domain DM55_RS07060 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DM55_RS07090 IPR034300 NADP transhydrogenase beta-like domain DM55_RS07090 IPR012136 NADP transhydrogenase, beta subunit DM55_RS07090 IPR029035 DHS-like NAD/FAD-binding domain superfamily DM55_RS07095 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal DM55_RS07100 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DM55_RS07100 IPR036291 NAD(P)-binding domain superfamily DM55_RS07100 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DM55_RS07100 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 DM55_RS07100 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 DM55_RS07105 IPR015797 NUDIX hydrolase-like domain superfamily DM55_RS07105 IPR000086 NUDIX hydrolase domain DM55_RS07105 IPR033713 Phosphatase NudJ DM55_RS07105 IPR020476 NUDIX hydrolase DM55_RS07105 IPR020084 NUDIX hydrolase, conserved site DM55_RS07110 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS07110 IPR023382 Adenine nucleotide alpha hydrolase-like domains DM55_RS07110 IPR004506 tRNA-specific 2-thiouridylase DM55_RS07115 IPR027283 Glutamate synthase large subunit-like protein, bacteria DM55_RS07115 IPR002932 Glutamate synthase domain DM55_RS07115 IPR013785 Aldolase-type TIM barrel DM55_RS07115 IPR024188 Glutamate synthase large subunit-like protein DM55_RS07120 IPR004046 Glutathione S-transferase, C-terminal DM55_RS07120 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS07120 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DM55_RS07120 IPR004045 Glutathione S-transferase, N-terminal DM55_RS07120 IPR034343 Uncharacterized GST-like protein YibF DM55_RS07120 IPR036249 Thioredoxin-like superfamily DM55_RS07125 IPR007865 Aminopeptidase P, N-terminal DM55_RS07125 IPR036005 Creatinase/aminopeptidase-like DM55_RS07125 IPR000994 Peptidase M24 DM55_RS07125 IPR001714 Peptidase M24, methionine aminopeptidase DM55_RS07125 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DM55_RS07125 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DM55_RS07130 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS07130 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 DM55_RS07130 IPR002938 FAD-binding domain DM55_RS07130 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase DM55_RS07130 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site DM55_RS07135 IPR001269 tRNA-dihydrouridine synthase DM55_RS07135 IPR013785 Aldolase-type TIM barrel DM55_RS07135 IPR018517 tRNA-dihydrouridine synthase, conserved site DM55_RS07135 IPR035587 DUS-like, FMN-binding domain DM55_RS07135 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal DM55_RS07135 IPR032887 tRNA-dihydrouridine synthase B DM55_RS07135 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 DM55_RS07140 IPR005412 DNA-binding protein Fis DM55_RS07140 IPR009057 Homeobox-like domain superfamily DM55_RS07140 IPR002197 DNA binding HTH domain, Fis-type DM55_RS07145 IPR016193 Cytidine deaminase-like DM55_RS07145 IPR011607 Methylglyoxal synthase-like domain DM55_RS07145 IPR036914 Methylglyoxal synthase-like domain superfamily DM55_RS07145 IPR002695 Bifunctional purine biosynthesis protein PurH-like DM55_RS07145 IPR024051 AICAR transformylase, duplicated domain superfamily DM55_RS07155 IPR002176 Crossover junction endodeoxyribonuclease RuvC DM55_RS07155 IPR036397 Ribonuclease H superfamily DM55_RS07155 IPR012337 Ribonuclease H-like superfamily DM55_RS07155 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site DM55_RS07160 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DM55_RS07160 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial DM55_RS07160 IPR036267 RuvA, C-terminal domain superfamily DM55_RS07160 IPR011114 Holliday junction DNA helicase RuvA, C-terminal DM55_RS07160 IPR012340 Nucleic acid-binding, OB-fold DM55_RS07160 IPR010994 RuvA domain 2-like DM55_RS07160 IPR000085 Bacterial DNA recombination protein RuvA DM55_RS07165 IPR004605 DNA helicase, Holliday junction RuvB-type DM55_RS07165 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS07165 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS07165 IPR008823 RuvB C-terminal winged helix domain DM55_RS07165 IPR008824 RuvB-like P-loop domain DM55_RS07165 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07165 IPR041445 RuvB, AAA lid domain DM55_RS07165 IPR003593 AAA+ ATPase domain DM55_RS07180 IPR013078 Histidine phosphatase superfamily, clade-1 DM55_RS07180 IPR029033 Histidine phosphatase superfamily DM55_RS07180 IPR005952 Phosphoglycerate mutase 1 DM55_RS07185 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DM55_RS07185 IPR003732 D-aminoacyl-tRNA deacylase DTD DM55_RS07190 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS07190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS07190 IPR002942 RNA-binding S4 domain DM55_RS07190 IPR036986 RNA-binding S4 domain superfamily DM55_RS07190 IPR002307 Tyrosine-tRNA ligase DM55_RS07190 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 DM55_RS07190 IPR024088 Tyrosine-tRNA ligase, bacterial-type DM55_RS07190 IPR002305 Aminoacyl-tRNA synthetase, class Ic DM55_RS07195 IPR005338 Anhydro-N-acetylmuramic acid kinase DM55_RS07200 IPR036249 Thioredoxin-like superfamily DM55_RS07200 IPR004046 Glutathione S-transferase, C-terminal DM55_RS07200 IPR004045 Glutathione S-transferase, N-terminal DM55_RS07200 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DM55_RS07200 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS07205 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS07205 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DM55_RS07205 IPR040079 Glutathione Transferase family DM55_RS07205 IPR036249 Thioredoxin-like superfamily DM55_RS07205 IPR004045 Glutathione S-transferase, N-terminal DM55_RS07210 IPR018062 HTH domain AraC-type, conserved site DM55_RS07210 IPR020449 Transcription regulator HTH, AraC- type DM55_RS07210 IPR014710 RmlC-like jelly roll fold DM55_RS07210 IPR018060 DNA binding HTH domain, AraC-type DM55_RS07210 IPR037923 Transcription regulator HTH-like DM55_RS07210 IPR009057 Homeobox-like domain superfamily DM55_RS07210 IPR003313 AraC-type arabinose-binding/dimerisation domain DM55_RS07215 IPR023063 FeS cluster insertion protein ErpA DM55_RS07215 IPR017870 FeS cluster insertion, C-terminal, conserved site DM55_RS07215 IPR016092 FeS cluster insertion protein DM55_RS07215 IPR000361 FeS cluster biogenesis DM55_RS07215 IPR035903 HesB-like domain superfamily DM55_RS07220 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS07220 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS07220 IPR020574 Ribosomal protein S9, conserved site DM55_RS07220 IPR023035 Ribosomal protein S9, bacterial/plastid DM55_RS07220 IPR000754 Ribosomal protein S9 DM55_RS07225 IPR036899 Ribosomal protein L13 superfamily DM55_RS07225 IPR005823 Ribosomal protein L13, bacterial-type DM55_RS07225 IPR005822 Ribosomal protein L13 DM55_RS07235 IPR013785 Aldolase-type TIM barrel DM55_RS07235 IPR006218 DAHP synthetase I/KDSA DM55_RS07235 IPR006219 DHAP synthase, class 1 DM55_RS07240 IPR025502 TldD DM55_RS07240 IPR036059 Metalloprotease TldD/PmbA superfamily DM55_RS07240 IPR035068 Metalloprotease TldD/PmbA, N-terminal DM55_RS07240 IPR002510 Metalloprotease TldD/PmbA DM55_RS07245 IPR003010 Carbon-nitrogen hydrolase DM55_RS07245 IPR001110 Uncharacterised protein family UPF0012, conserved site DM55_RS07245 IPR036526 Carbon-nitrogen hydrolase superfamily DM55_RS07250 IPR011836 Conserved hypothetical protein CHP02099 DM55_RS07250 IPR025263 Domain of unknown function DUF3971 DM55_RS07250 IPR032712 AsmA-like, C-terminal DM55_RS07255 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase DM55_RS07255 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme DM55_RS07255 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain DM55_RS07260 IPR004604 DNA recombination/repair protein RecN DM55_RS07260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07260 IPR003395 RecF/RecN/SMC, N-terminal DM55_RS07265 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal DM55_RS07265 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal DM55_RS07265 IPR002504 NAD kinase DM55_RS07265 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DM55_RS07270 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS07270 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal DM55_RS07270 IPR002571 Heat-inducible transcription repressor HrcA DM55_RS07270 IPR029016 GAF-like domain superfamily DM55_RS07270 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS07270 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily DM55_RS07270 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain DM55_RS07275 IPR019772 Ferrochelatase, active site DM55_RS07275 IPR001015 Ferrochelatase DM55_RS07275 IPR033644 Ferrochelatase, C-terminal DM55_RS07275 IPR033659 Ferrochelatase, N-terminal DM55_RS07280 IPR025708 Heat shock protein 15 DM55_RS07280 IPR036986 RNA-binding S4 domain superfamily DM55_RS07280 IPR002942 RNA-binding S4 domain DM55_RS07285 IPR013805 GrpE nucleotide exchange factor, coiled-coil DM55_RS07285 IPR009012 GrpE nucleotide exchange factor, head DM55_RS07285 IPR000740 GrpE nucleotide exchange factor DM55_RS07295 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily DM55_RS07295 IPR018181 Heat shock protein 70, conserved site DM55_RS07295 IPR012725 Chaperone DnaK DM55_RS07295 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily DM55_RS07295 IPR013126 Heat shock protein 70 family DM55_RS07300 IPR008971 HSP40/DnaJ peptide-binding DM55_RS07300 IPR001623 DnaJ domain DM55_RS07300 IPR002939 Chaperone DnaJ, C-terminal DM55_RS07300 IPR012724 Chaperone DnaJ DM55_RS07300 IPR001305 Heat shock protein DnaJ, cysteine-rich domain DM55_RS07300 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DM55_RS07300 IPR036869 Chaperone J-domain superfamily DM55_RS07300 IPR018253 DnaJ domain, conserved site DM55_RS07305 IPR005801 ADC synthase DM55_RS07305 IPR015890 Chorismate-utilising enzyme, C-terminal DM55_RS07305 IPR006805 Anthranilate synthase component I, N-terminal DM55_RS07305 IPR019999 Anthranilate synthase component I-like DM55_RS07305 IPR005802 Aminodeoxychorismate synthase, component I DM55_RS07310 IPR040442 Pyruvate kinase-like domain superfamily DM55_RS07310 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DM55_RS07310 IPR003700 Ketopantoate hydroxymethyltransferase DM55_RS07315 IPR002624 Deoxynucleoside kinase DM55_RS07315 IPR031314 Deoxynucleoside kinase domain DM55_RS07315 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07320 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily DM55_RS07320 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK DM55_RS07325 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain DM55_RS07325 IPR025866 Polymerase A arginine-rich C-terminal domain DM55_RS07325 IPR010206 Poly(A) polymerase I DM55_RS07325 IPR002646 Poly A polymerase, head domain DM55_RS07335 IPR020591 Chromosomal replication control, initiator DnaA-like DM55_RS07335 IPR013317 Chromosomal replication initiator protein DnaA DM55_RS07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07335 IPR017788 DnaA regulatory inactivator Hda DM55_RS07340 IPR010918 PurM-like, C-terminal domain DM55_RS07340 IPR036676 PurM-like, C-terminal domain superfamily DM55_RS07340 IPR036921 PurM-like, N-terminal domain superfamily DM55_RS07340 IPR016188 PurM-like, N-terminal domain DM55_RS07340 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase DM55_RS07350 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07350 IPR039657 Dimethylallyltransferase DM55_RS07350 IPR018022 IPP transferase DM55_RS07355 IPR020667 DNA mismatch repair protein, MutL DM55_RS07355 IPR037198 MutL, C-terminal domain superfamily DM55_RS07355 IPR042121 MutL, C-terminal domain, regulatory subdomain DM55_RS07355 IPR042120 MutL, C-terminal domain, dimerisation subdomain DM55_RS07355 IPR014790 MutL, C-terminal, dimerisation DM55_RS07355 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms DM55_RS07355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS07355 IPR013507 DNA mismatch repair protein, S5 domain 2-like DM55_RS07355 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS07355 IPR002099 DNA mismatch repair protein family, N-terminal DM55_RS07355 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS07355 IPR014762 DNA mismatch repair, conserved site DM55_RS07360 IPR032816 SNARE associated Golgi protein DM55_RS07360 IPR032818 DedA family DM55_RS07365 IPR008910 Conserved TM helix DM55_RS07365 IPR023408 Mechanosensitive ion channel MscS domain superfamily DM55_RS07365 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DM55_RS07365 IPR006686 Mechanosensitive ion channel MscS, conserved site DM55_RS07365 IPR011066 Mechanosensitive ion channel MscS, C-terminal DM55_RS07365 IPR006685 Mechanosensitive ion channel MscS DM55_RS07365 IPR010920 LSM domain superfamily DM55_RS07375 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS07375 IPR014710 RmlC-like jelly roll fold DM55_RS07375 IPR005835 Nucleotidyl transferase domain DM55_RS07375 IPR011051 RmlC-like cupin domain superfamily DM55_RS07375 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase DM55_RS07375 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal DM55_RS07380 IPR007833 Capsule polysaccharide biosynthesis DM55_RS07390 IPR003715 Polysaccharide export protein DM55_RS07395 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD DM55_RS07400 IPR000412 ABC-2 transporter DM55_RS07400 IPR013525 ABC-2 type transporter DM55_RS07405 IPR003439 ABC transporter-like DM55_RS07405 IPR017871 ABC transporter, conserved site DM55_RS07405 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07405 IPR003593 AAA+ ATPase domain DM55_RS07440 IPR036291 NAD(P)-binding domain superfamily DM55_RS07440 IPR016040 NAD(P)-binding domain DM55_RS07445 IPR013750 GHMP kinase, C-terminal domain DM55_RS07445 IPR014606 D,D-heptose 7-phosphate kinase DM55_RS07445 IPR036554 GHMP kinase, C-terminal domain superfamily DM55_RS07445 IPR001174 Galactokinase/homoserine kinase DM55_RS07445 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS07445 IPR006204 GHMP kinase N-terminal domain DM55_RS07450 IPR035461 GmhA/DiaA DM55_RS07450 IPR001347 Sugar isomerase (SIS) DM55_RS07450 IPR004515 Phosphoheptose isomerase DM55_RS07455 IPR005835 Nucleotidyl transferase domain DM55_RS07455 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS07460 IPR006543 Histidinol-phosphate phosphatase DM55_RS07460 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase DM55_RS07460 IPR023214 HAD superfamily DM55_RS07460 IPR036412 HAD-like superfamily DM55_RS07460 IPR006549 HAD-superfamily hydrolase,subfamily IIIA DM55_RS07465 IPR007833 Capsule polysaccharide biosynthesis DM55_RS07470 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS07470 IPR036291 NAD(P)-binding domain superfamily DM55_RS07470 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS07470 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DM55_RS07475 IPR017850 Alkaline-phosphatase-like, core domain superfamily DM55_RS07475 IPR000917 Sulfatase, N-terminal DM55_RS07480 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DM55_RS07480 IPR014031 Beta-ketoacyl synthase, C-terminal DM55_RS07480 IPR018201 Beta-ketoacyl synthase, active site DM55_RS07480 IPR011032 GroES-like superfamily DM55_RS07480 IPR013154 Alcohol dehydrogenase, N-terminal DM55_RS07480 IPR020807 Polyketide synthase, dehydratase domain DM55_RS07480 IPR020843 Polyketide synthase, enoylreductase domain DM55_RS07480 IPR014030 Beta-ketoacyl synthase, N-terminal DM55_RS07480 IPR013968 Polyketide synthase, ketoreductase domain DM55_RS07480 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS07480 IPR009081 Phosphopantetheine binding ACP domain DM55_RS07480 IPR014043 Acyl transferase DM55_RS07480 IPR036736 ACP-like superfamily DM55_RS07480 IPR006162 Phosphopantetheine attachment site DM55_RS07480 IPR016039 Thiolase-like DM55_RS07480 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS07480 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DM55_RS07480 IPR042104 Polyketide synthase, dehydratase domain superfamily DM55_RS07480 IPR032821 Ketoacyl-synthetase, C-terminal extension DM55_RS07480 IPR036291 NAD(P)-binding domain superfamily DM55_RS07485 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal DM55_RS07485 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase DM55_RS07485 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS07485 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal DM55_RS07490 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DM55_RS07490 IPR004839 Aminotransferase, class I/classII DM55_RS07490 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type DM55_RS07490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS07490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS07490 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS07505 IPR009057 Homeobox-like domain superfamily DM55_RS07505 IPR002514 Transposase IS3/IS911family DM55_RS07510 IPR036397 Ribonuclease H superfamily DM55_RS07510 IPR012337 Ribonuclease H-like superfamily DM55_RS07510 IPR025948 HTH-like domain DM55_RS07510 IPR001584 Integrase, catalytic core DM55_RS07520 IPR004540 Translation elongation factor EFG/EF2 DM55_RS07520 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS07520 IPR000795 Transcription factor, GTP-binding domain DM55_RS07520 IPR005225 Small GTP-binding protein domain DM55_RS07520 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS07520 IPR009022 Elongation factor G, domain III DM55_RS07520 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07520 IPR031157 Tr-type G domain, conserved site DM55_RS07520 IPR004161 Translation elongation factor EFTu-like, domain 2 DM55_RS07520 IPR005517 Translation elongation factor EFG/EF2, domain IV DM55_RS07520 IPR035649 EFG, domain V DM55_RS07520 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS07520 IPR041095 Elongation Factor G, domain II DM55_RS07520 IPR035647 EF-G domain III/V-like DM55_RS07520 IPR000640 Elongation factor EFG, domain V-like DM55_RS07530 IPR020471 Aldo/keto reductase DM55_RS07530 IPR036812 NADP-dependent oxidoreductase domain superfamily DM55_RS07530 IPR023210 NADP-dependent oxidoreductase domain DM55_RS07535 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DM55_RS07535 IPR011663 UbiC transcription regulator-associated DM55_RS07535 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS07535 IPR000524 Transcription regulator HTH, GntR DM55_RS07535 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS07545 IPR024176 Citrate synthase, bacterial-type DM55_RS07545 IPR002020 Citrate synthase DM55_RS07545 IPR019810 Citrate synthase active site DM55_RS07545 IPR016142 Citrate synthase-like, large alpha subdomain DM55_RS07545 IPR036969 Citrate synthase superfamily DM55_RS07545 IPR010953 Citrate synthase, type I DM55_RS07545 IPR016143 Citrate synthase-like, small alpha subdomain DM55_RS07555 IPR023721 Multidrug resistance protein MdtD DM55_RS07555 IPR020846 Major facilitator superfamily domain DM55_RS07555 IPR036259 MFS transporter superfamily DM55_RS07555 IPR011701 Major facilitator superfamily DM55_RS07555 IPR004638 Drug resistance transporter EmrB-like DM55_RS07595 IPR009057 Homeobox-like domain superfamily DM55_RS07595 IPR002514 Transposase IS3/IS911family DM55_RS07600 IPR011335 Restriction endonuclease type II-like DM55_RS07600 IPR038590 YaeQ superfamily DM55_RS07600 IPR009822 YaeQ DM55_RS07610 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DM55_RS07610 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily DM55_RS07610 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS07610 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DM55_RS07610 IPR035451 Ada-like domain superfamily DM55_RS07610 IPR004026 Ada DNA repair, metal-binding DM55_RS07610 IPR016221 Bifunctional regulatory protein Ada DM55_RS07610 IPR009057 Homeobox-like domain superfamily DM55_RS07610 IPR018060 DNA binding HTH domain, AraC-type DM55_RS07610 IPR018062 HTH domain AraC-type, conserved site DM55_RS07610 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DM55_RS07610 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain DM55_RS07615 IPR018062 HTH domain AraC-type, conserved site DM55_RS07615 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DM55_RS07615 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily DM55_RS07615 IPR011257 DNA glycosylase DM55_RS07615 IPR009057 Homeobox-like domain superfamily DM55_RS07615 IPR003265 HhH-GPD domain DM55_RS07615 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal DM55_RS07615 IPR035451 Ada-like domain superfamily DM55_RS07615 IPR018060 DNA binding HTH domain, AraC-type DM55_RS07615 IPR004026 Ada DNA repair, metal-binding DM55_RS07620 IPR006334 Glutamate--cysteine ligase, monofunctional DM55_RS07620 IPR007370 Glutamate--cysteine ligase DM55_RS07620 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DM55_RS07625 IPR007631 RNA polymerase sigma factor 70, non-essential domain DM55_RS07625 IPR007127 RNA polymerase sigma factor 70, region 1.1 DM55_RS07625 IPR042189 Sigma-70 factor, region 1.1 superfamily DM55_RS07625 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS07625 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS07625 IPR028630 RNA polymerase sigma factor RpoD DM55_RS07625 IPR013324 RNA polymerase sigma factor, region 3/4-like DM55_RS07625 IPR007624 RNA polymerase sigma-70 region 3 DM55_RS07625 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS07625 IPR000943 RNA polymerase sigma-70 DM55_RS07625 IPR007630 RNA polymerase sigma-70 region 4 DM55_RS07625 IPR009042 RNA polymerase sigma-70 region 1.2 DM55_RS07625 IPR012760 RNA polymerase sigma factor RpoD, C-terminal DM55_RS07625 IPR014284 RNA polymerase sigma-70 like domain DM55_RS07645 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS07645 IPR000847 Transcription regulator HTH, LysR DM55_RS07645 IPR005119 LysR, substrate-binding DM55_RS07645 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS07650 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein DM55_RS07650 IPR006059 Bacterial extracellular solute-binding protein DM55_RS07655 IPR000286 Histone deacetylase family DM55_RS07655 IPR023801 Histone deacetylase domain DM55_RS07655 IPR037138 Histone deacetylase domain superfamily DM55_RS07655 IPR023696 Ureohydrolase domain superfamily DM55_RS07660 IPR001110 Uncharacterised protein family UPF0012, conserved site DM55_RS07660 IPR003010 Carbon-nitrogen hydrolase DM55_RS07660 IPR036526 Carbon-nitrogen hydrolase superfamily DM55_RS07670 IPR006430 Phage portal protein PBSX family DM55_RS07670 IPR030935 Phage portal protein PBSX family, Proteobacteria DM55_RS07685 IPR025948 HTH-like domain DM55_RS07685 IPR001584 Integrase, catalytic core DM55_RS07685 IPR036397 Ribonuclease H superfamily DM55_RS07685 IPR012337 Ribonuclease H-like superfamily DM55_RS07690 IPR002514 Transposase IS3/IS911family DM55_RS07690 IPR009057 Homeobox-like domain superfamily DM55_RS07700 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS07700 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS07700 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS07720 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DM55_RS07720 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DM55_RS07720 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM55_RS07720 IPR036291 NAD(P)-binding domain superfamily DM55_RS07720 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DM55_RS07725 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS07725 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS07725 IPR000847 Transcription regulator HTH, LysR DM55_RS07725 IPR005119 LysR, substrate-binding DM55_RS07730 IPR000380 DNA topoisomerase, type IA DM55_RS07730 IPR003601 DNA topoisomerase, type IA, domain 2 DM55_RS07730 IPR023406 DNA topoisomerase, type IA, active site DM55_RS07730 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DM55_RS07730 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DM55_RS07730 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DM55_RS07730 IPR013497 DNA topoisomerase, type IA, central DM55_RS07730 IPR023405 DNA topoisomerase, type IA, core domain DM55_RS07730 IPR003602 DNA topoisomerase, type IA, DNA-binding domain DM55_RS07730 IPR005738 DNA topoisomerase III DM55_RS07730 IPR006171 TOPRIM domain DM55_RS07730 IPR034144 DNA topoisomerase 3-like, TOPRIM domain DM55_RS07740 IPR041614 DprA, winged helix domain DM55_RS07740 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS07740 IPR003488 DNA recombination-mediator protein A DM55_RS07745 IPR025948 HTH-like domain DM55_RS07745 IPR001584 Integrase, catalytic core DM55_RS07745 IPR012337 Ribonuclease H-like superfamily DM55_RS07745 IPR036397 Ribonuclease H superfamily DM55_RS07750 IPR003488 DNA recombination-mediator protein A DM55_RS07750 IPR041614 DprA, winged helix domain DM55_RS07750 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS07755 IPR036821 Peptide deformylase superfamily DM55_RS07755 IPR023635 Peptide deformylase DM55_RS07760 IPR005794 Methionyl-tRNA formyltransferase DM55_RS07760 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain DM55_RS07760 IPR037022 Formyl transferase, C-terminal domain superfamily DM55_RS07760 IPR002376 Formyl transferase, N-terminal DM55_RS07760 IPR005793 Formyl transferase, C-terminal DM55_RS07760 IPR011034 Formyl transferase-like, C-terminal domain superfamily DM55_RS07760 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DM55_RS07760 IPR036477 Formyl transferase, N-terminal domain superfamily DM55_RS07765 IPR001123 Amino acid exporter protein, LeuE-type DM55_RS07765 IPR004778 Homoserine/Threonine efflux protein DM55_RS07770 IPR022919 Peptidase M48, protease HtpX, putative DM55_RS07770 IPR001915 Peptidase M48 DM55_RS07775 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site DM55_RS07775 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type DM55_RS07775 IPR035926 NusB-like superfamily DM55_RS07775 IPR006027 NusB/RsmB/TIM44 DM55_RS07775 IPR023267 RNA (C5-cytosine) methyltransferase DM55_RS07775 IPR004573 rRNA small subunit methyltransferase B DM55_RS07775 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae DM55_RS07775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS07785 IPR000014 PAS domain DM55_RS07785 IPR035965 PAS domain superfamily DM55_RS07785 IPR003660 HAMP domain DM55_RS07785 IPR013767 PAS fold DM55_RS07785 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS07785 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator DM55_RS07785 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS07785 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS07785 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS07785 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS07785 IPR005467 Histidine kinase domain DM55_RS07790 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS07790 IPR001789 Signal transduction response regulator, receiver domain DM55_RS07790 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS07790 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07790 IPR009057 Homeobox-like domain superfamily DM55_RS07790 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DM55_RS07790 IPR011006 CheY-like superfamily DM55_RS07790 IPR003593 AAA+ ATPase domain DM55_RS07790 IPR002197 DNA binding HTH domain, Fis-type DM55_RS07790 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS07800 IPR018317 Queuosine biosynthesis protein QueC DM55_RS07800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS07805 IPR024924 7-carboxy-7-deazaguanine synthase-like DM55_RS07805 IPR013785 Aldolase-type TIM barrel DM55_RS07805 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type DM55_RS07805 IPR007197 Radical SAM DM55_RS07810 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family DM55_RS07810 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily DM55_RS07815 IPR017648 5-keto-4-deoxy-D-glucarate aldolase DM55_RS07815 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DM55_RS07815 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DM55_RS07815 IPR040442 Pyruvate kinase-like domain superfamily DM55_RS07825 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site DM55_RS07825 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB DM55_RS07825 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA DM55_RS07830 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS07830 IPR036138 Penicillin-binding protein, dimerisation domain superfamily DM55_RS07830 IPR001460 Penicillin-binding protein, transpeptidase DM55_RS07830 IPR017790 Penicillin-binding protein 2 DM55_RS07830 IPR005311 Penicillin-binding protein, dimerisation domain DM55_RS07845 IPR004753 Cell shape determining protein MreB DM55_RS07850 IPR003837 Glu-tRNAGln amidotransferase C subunit DM55_RS07850 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C DM55_RS07855 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit DM55_RS07855 IPR036928 Amidase signature (AS) superfamily DM55_RS07855 IPR023631 Amidase signature domain DM55_RS07855 IPR000120 Amidase DM55_RS07855 IPR020556 Amidase, conserved site DM55_RS07860 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 DM55_RS07860 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DM55_RS07860 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site DM55_RS07860 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 DM55_RS07860 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic DM55_RS07860 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like DM55_RS07860 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E DM55_RS07860 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit DM55_RS07860 IPR018027 Asn/Gln amidotransferase DM55_RS07865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07865 IPR016898 Polyphosphate kinase 2 DM55_RS07865 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 DM55_RS07865 IPR022488 Polyphosphate kinase-2-related DM55_RS07870 IPR020847 AP endonuclease 1, binding site DM55_RS07870 IPR004808 AP endonuclease 1 DM55_RS07870 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DM55_RS07870 IPR005135 Endonuclease/exonuclease/phosphatase DM55_RS07870 IPR020848 AP endonuclease 1, conserved site DM55_RS07885 IPR002168 Lipase, GDXG, putative histidine active site DM55_RS07885 IPR013094 Alpha/beta hydrolase fold-3 DM55_RS07885 IPR029058 Alpha/Beta hydrolase fold DM55_RS07885 IPR033140 Lipase, GDXG, putative serine active site DM55_RS07895 IPR004638 Drug resistance transporter EmrB-like DM55_RS07895 IPR005829 Sugar transporter, conserved site DM55_RS07895 IPR036259 MFS transporter superfamily DM55_RS07895 IPR020846 Major facilitator superfamily domain DM55_RS07895 IPR011701 Major facilitator superfamily DM55_RS07915 IPR035472 RpiR-like, SIS domain DM55_RS07915 IPR009057 Homeobox-like domain superfamily DM55_RS07915 IPR022821 Transcription regulator HTH, MurR DM55_RS07915 IPR001347 Sugar isomerase (SIS) DM55_RS07915 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS07915 IPR000281 Helix-turn-helix protein RpiR DM55_RS07920 IPR011059 Metal-dependent hydrolase, composite domain superfamily DM55_RS07920 IPR013108 Amidohydrolase 3 DM55_RS07920 IPR023100 D-aminoacylase, insert domain superfamily DM55_RS07920 IPR032466 Metal-dependent hydrolase DM55_RS07930 IPR019897 RidA, conserved site DM55_RS07930 IPR035959 RutC-like superfamily DM55_RS07930 IPR006056 RidA family DM55_RS07930 IPR006175 YjgF/YER057c/UK114 family DM55_RS07935 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal DM55_RS07935 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF DM55_RS07935 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 DM55_RS07940 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DM55_RS07940 IPR005787 Threonine dehydratase, biosynthetic DM55_RS07940 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS07940 IPR001926 Pyridoxal-phosphate dependent enzyme DM55_RS07940 IPR038110 Threonine dehydratase, ACT-like domain superfamily DM55_RS07940 IPR001721 Threonine dehydratase, ACT-like domain DM55_RS07965 IPR023576 UbiE/COQ5 methyltransferase, conserved site DM55_RS07965 IPR004033 UbiE/COQ5 methyltransferase DM55_RS07965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS07980 IPR004147 UbiB domain DM55_RS07980 IPR010232 Probable protein kinase UbiB DM55_RS07980 IPR011009 Protein kinase-like domain superfamily DM55_RS08000 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DM55_RS08000 IPR004115 GAD-like domain superfamily DM55_RS08000 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb DM55_RS08000 IPR004524 Aspartate-tRNA ligase, type 1 DM55_RS08000 IPR006195 Aminoacyl-tRNA synthetase, class II DM55_RS08000 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DM55_RS08000 IPR029351 GAD domain DM55_RS08000 IPR012340 Nucleic acid-binding, OB-fold DM55_RS08005 IPR015797 NUDIX hydrolase-like domain superfamily DM55_RS08005 IPR003564 Dihydroneopterin triphosphate diphosphatase DM55_RS08005 IPR020084 NUDIX hydrolase, conserved site DM55_RS08005 IPR000086 NUDIX hydrolase domain DM55_RS08010 IPR001736 Phospholipase D/Transphosphatidylase DM55_RS08010 IPR030872 Cardiolipin synthase B DM55_RS08010 IPR025202 Phospholipase D-like domain DM55_RS08020 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DM55_RS08020 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS08020 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS08020 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS08020 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS08020 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DM55_RS08020 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS08025 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS08025 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS08025 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS08025 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS08025 IPR036291 NAD(P)-binding domain superfamily DM55_RS08025 IPR001753 Enoyl-CoA hydratase/isomerase DM55_RS08025 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DM55_RS08030 IPR002155 Thiolase DM55_RS08030 IPR020615 Thiolase, acyl-enzyme intermediate active site DM55_RS08030 IPR020616 Thiolase, N-terminal DM55_RS08030 IPR020610 Thiolase, active site DM55_RS08030 IPR020617 Thiolase, C-terminal DM55_RS08030 IPR020613 Thiolase, conserved site DM55_RS08030 IPR016039 Thiolase-like DM55_RS08035 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS08035 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DM55_RS08035 IPR001753 Enoyl-CoA hydratase/isomerase DM55_RS08035 IPR014748 Enoyl-CoA hydratase, C-terminal DM55_RS08040 IPR016193 Cytidine deaminase-like DM55_RS08040 IPR003786 Sulfur carrier protein FdhD DM55_RS08050 IPR006683 Thioesterase domain DM55_RS08050 IPR029069 HotDog domain superfamily DM55_RS08050 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain DM55_RS08050 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase DM55_RS08055 IPR039421 Type I protein exporter DM55_RS08055 IPR017871 ABC transporter, conserved site DM55_RS08055 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08055 IPR036640 ABC transporter type 1, transmembrane domain superfamily DM55_RS08055 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS08055 IPR003593 AAA+ ATPase domain DM55_RS08055 IPR003439 ABC transporter-like DM55_RS08065 IPR005835 Nucleotidyl transferase domain DM55_RS08065 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS08070 IPR002575 Aminoglycoside phosphotransferase DM55_RS08070 IPR011009 Protein kinase-like domain superfamily DM55_RS08075 IPR020889 LPS-assembly protein LptD DM55_RS08075 IPR007543 LptD, C-terminal DM55_RS08080 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DM55_RS08080 IPR023034 Peptidyl-prolyl isomerase SurA DM55_RS08080 IPR027304 Trigger factor/SurA domain superfamily DM55_RS08080 IPR015391 SurA N-terminal DM55_RS08085 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase DM55_RS08085 IPR005255 PdxA family DM55_RS08090 IPR011530 Ribosomal RNA adenine dimethylase DM55_RS08090 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DM55_RS08090 IPR023165 rRNA adenine dimethylase-like DM55_RS08090 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal DM55_RS08090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS08100 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DM55_RS08100 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DM55_RS08100 IPR004361 Glyoxalase I DM55_RS08100 IPR018146 Glyoxalase I, conserved site DM55_RS08100 IPR037523 Vicinal oxygen chelate (VOC) domain DM55_RS08110 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase DM55_RS08110 IPR002123 Phospholipid/glycerol acyltransferase DM55_RS08115 IPR006543 Histidinol-phosphate phosphatase DM55_RS08115 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase DM55_RS08115 IPR036412 HAD-like superfamily DM55_RS08115 IPR006549 HAD-superfamily hydrolase,subfamily IIIA DM55_RS08115 IPR023214 HAD superfamily DM55_RS08120 IPR015944 Glycine-tRNA ligase, beta subunit DM55_RS08120 IPR008909 DALR anticodon binding DM55_RS08120 IPR006194 Glycine-tRNA synthetase, heterodimeric DM55_RS08125 IPR002310 Glycine-tRNA ligase, alpha subunit DM55_RS08125 IPR006194 Glycine-tRNA synthetase, heterodimeric DM55_RS08130 IPR004563 Apolipoprotein N-acyltransferase DM55_RS08130 IPR003010 Carbon-nitrogen hydrolase DM55_RS08130 IPR036526 Carbon-nitrogen hydrolase superfamily DM55_RS08135 IPR000644 CBS domain DM55_RS08135 IPR036318 FAD-binding, type PCMH-like superfamily DM55_RS08135 IPR016169 FAD-binding, type PCMH, subdomain 2 DM55_RS08135 IPR005170 Transporter-associated domain DM55_RS08140 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase DM55_RS08140 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily DM55_RS08140 IPR013024 Gamma-glutamyl cyclotransferase-like DM55_RS08145 IPR023091 Metalloprotease catalytic domain superfamily, predicted DM55_RS08145 IPR002036 Endoribonuclease YbeY DM55_RS08145 IPR020549 Endoribonuclease YbeY, conserved site DM55_RS08150 IPR003714 PhoH-like protein DM55_RS08150 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08155 IPR038135 Methylthiotransferase, N-terminal domain superfamily DM55_RS08155 IPR002792 TRAM domain DM55_RS08155 IPR023404 Radical SAM, alpha/beta horseshoe DM55_RS08155 IPR007197 Radical SAM DM55_RS08155 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB DM55_RS08155 IPR013848 Methylthiotransferase, N-terminal DM55_RS08155 IPR020612 Methylthiotransferase, conserved site DM55_RS08155 IPR005839 Methylthiotransferase DM55_RS08155 IPR006638 Elp3/MiaB/NifB DM55_RS08160 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS08160 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS08160 IPR000847 Transcription regulator HTH, LysR DM55_RS08160 IPR005119 LysR, substrate-binding DM55_RS08165 IPR020846 Major facilitator superfamily domain DM55_RS08165 IPR036259 MFS transporter superfamily DM55_RS08165 IPR011701 Major facilitator superfamily DM55_RS08170 IPR014710 RmlC-like jelly roll fold DM55_RS08170 IPR001387 Cro/C1-type helix-turn-helix domain DM55_RS08170 IPR013096 Cupin 2, conserved barrel DM55_RS08170 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DM55_RS08170 IPR011051 RmlC-like cupin domain superfamily DM55_RS08175 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB DM55_RS08175 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DM55_RS08180 IPR023214 HAD superfamily DM55_RS08180 IPR036412 HAD-like superfamily DM55_RS08180 IPR006439 HAD hydrolase, subfamily IA DM55_RS08180 IPR041492 Haloacid dehalogenase-like hydrolase DM55_RS08180 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DM55_RS08195 IPR033738 Asparagine synthase, N-terminal domain DM55_RS08195 IPR001962 Asparagine synthase DM55_RS08195 IPR006426 Asparagine synthase, glutamine-hydrolyzing DM55_RS08195 IPR017932 Glutamine amidotransferase type 2 domain DM55_RS08195 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS08200 IPR001986 Enolpyruvate transferase domain DM55_RS08200 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DM55_RS08200 IPR036968 Enolpyruvate transferase domain superfamily DM55_RS08200 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase DM55_RS08200 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site DM55_RS08205 IPR036968 Enolpyruvate transferase domain superfamily DM55_RS08205 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase DM55_RS08205 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DM55_RS08205 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site DM55_RS08205 IPR001986 Enolpyruvate transferase domain DM55_RS08215 IPR023271 Aquaporin-like DM55_RS08215 IPR000425 Major intrinsic protein DM55_RS08215 IPR022357 Major intrinsic protein, conserved site DM55_RS08220 IPR018483 Carbohydrate kinase, FGGY, conserved site DM55_RS08220 IPR005999 Glycerol kinase DM55_RS08220 IPR018484 Carbohydrate kinase, FGGY, N-terminal DM55_RS08220 IPR018485 Carbohydrate kinase, FGGY, C-terminal DM55_RS08220 IPR000577 Carbohydrate kinase, FGGY DM55_RS08225 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase DM55_RS08225 IPR006076 FAD dependent oxidoreductase DM55_RS08225 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily DM55_RS08225 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS08225 IPR031656 Alpha-glycerophosphate oxidase, C-terminal DM55_RS08240 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DM55_RS08240 IPR014036 DeoR C-terminal sensor domain DM55_RS08240 IPR001034 DeoR-type HTH domain DM55_RS08240 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS08240 IPR037171 NagB/RpiA transferase-like DM55_RS08240 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS08245 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS08260 IPR011545 DEAD/DEAH box helicase domain DM55_RS08260 IPR014001 Helicase superfamily 1/2, ATP-binding domain DM55_RS08260 IPR001650 Helicase, C-terminal DM55_RS08260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08260 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DM55_RS08260 IPR028622 ATP-dependent RNA helicase RhlE DM55_RS08260 IPR014014 RNA helicase, DEAD-box type, Q motif DM55_RS08265 IPR009056 Cytochrome c-like domain DM55_RS08265 IPR036909 Cytochrome c-like domain superfamily DM55_RS08265 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit DM55_RS08280 IPR029065 Enolase C-terminal domain-like DM55_RS08280 IPR023592 D-galactonate dehydratase DM55_RS08280 IPR029017 Enolase-like, N-terminal DM55_RS08280 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DM55_RS08280 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DM55_RS08280 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DM55_RS08280 IPR034593 Mandelate racemase-like DM55_RS08280 IPR036849 Enolase-like, C-terminal domain superfamily DM55_RS08295 IPR015914 Purple acid phosphatase, N-terminal DM55_RS08295 IPR006311 Twin-arginine translocation pathway, signal sequence DM55_RS08295 IPR008963 Purple acid phosphatase-like, N-terminal DM55_RS08295 IPR029052 Metallo-dependent phosphatase-like DM55_RS08295 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DM55_RS08295 IPR039331 Purple acid phosphatase-like DM55_RS08300 IPR000160 GGDEF domain DM55_RS08300 IPR029787 Nucleotide cyclase DM55_RS08300 IPR005330 MHYT domain DM55_RS08300 IPR035919 EAL domain superfamily DM55_RS08300 IPR001633 EAL domain DM55_RS08305 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08305 IPR009057 Homeobox-like domain superfamily DM55_RS08305 IPR001789 Signal transduction response regulator, receiver domain DM55_RS08305 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS08305 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS08305 IPR002197 DNA binding HTH domain, Fis-type DM55_RS08305 IPR011006 CheY-like superfamily DM55_RS08320 IPR013655 PAS fold-3 DM55_RS08320 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS08320 IPR003660 HAMP domain DM55_RS08320 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS08320 IPR035965 PAS domain superfamily DM55_RS08320 IPR000014 PAS domain DM55_RS08320 IPR001610 PAC motif DM55_RS08345 IPR007016 O-antigen ligase-related DM55_RS08345 IPR031726 Protein glycosylation ligase domain DM55_RS08345 IPR021797 Virulence factor membrane-bound polymerase, C-terminal DM55_RS08350 IPR001082 Fimbrial protein pilin DM55_RS08350 IPR012902 Prokaryotic N-terminal methylation site DM55_RS08355 IPR005496 Integral membrane protein TerC DM55_RS08355 IPR022301 Integral membrane protein YjbE DM55_RS08360 IPR016102 Succinyl-CoA synthetase-like DM55_RS08360 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DM55_RS08360 IPR003781 CoA-binding DM55_RS08360 IPR036291 NAD(P)-binding domain superfamily DM55_RS08360 IPR005810 Succinyl-CoA ligase, alpha subunit DM55_RS08360 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DM55_RS08360 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DM55_RS08365 IPR011761 ATP-grasp fold DM55_RS08365 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS08365 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site DM55_RS08365 IPR005809 Succinate--CoA synthetase, beta subunit DM55_RS08365 IPR016102 Succinyl-CoA synthetase-like DM55_RS08365 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type DM55_RS08365 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DM55_RS08375 IPR003783 Regulatory protein RecX DM55_RS08375 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS08380 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08380 IPR020584 DNA recombination/repair protein RecA, conserved site DM55_RS08380 IPR013765 DNA recombination and repair protein RecA DM55_RS08380 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface DM55_RS08380 IPR023400 DNA recombination and repair protein RecA, C-terminal DM55_RS08380 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain DM55_RS08380 IPR003593 AAA+ ATPase domain DM55_RS08385 IPR011006 CheY-like superfamily DM55_RS08385 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS08385 IPR001867 OmpR/PhoB-type DNA-binding domain DM55_RS08385 IPR001789 Signal transduction response regulator, receiver domain DM55_RS08385 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS08385 IPR039420 Transcriptional regulatory protein WalR-like DM55_RS08390 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS08390 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS08390 IPR005467 Histidine kinase domain DM55_RS08390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS08390 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS08390 IPR003660 HAMP domain DM55_RS08390 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS08395 IPR005829 Sugar transporter, conserved site DM55_RS08395 IPR036292 Proline/betaine transporter ProP, C-terminal DM55_RS08395 IPR020846 Major facilitator superfamily domain DM55_RS08395 IPR005828 Major facilitator, sugar transporter-like DM55_RS08395 IPR036259 MFS transporter superfamily DM55_RS08395 IPR004736 MFS transporter, metabolite:H symporter DM55_RS08395 IPR015041 Osmosensory transporter coiled coil DM55_RS08410 IPR001584 Integrase, catalytic core DM55_RS08410 IPR025948 HTH-like domain DM55_RS08410 IPR012337 Ribonuclease H-like superfamily DM55_RS08410 IPR036397 Ribonuclease H superfamily DM55_RS08415 IPR002514 Transposase IS3/IS911family DM55_RS08415 IPR009057 Homeobox-like domain superfamily DM55_RS08420 IPR023045 Molybdenum cofactor biosynthesis C DM55_RS08420 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily DM55_RS08420 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain DM55_RS08425 IPR011990 Tetratricopeptide-like helical domain superfamily DM55_RS08425 IPR001915 Peptidase M48 DM55_RS08425 IPR030873 Beta-barrel assembly-enhancing protease DM55_RS08425 IPR019734 Tetratricopeptide repeat DM55_RS08425 IPR013026 Tetratricopeptide repeat-containing domain DM55_RS08435 IPR029058 Alpha/Beta hydrolase fold DM55_RS08435 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS08435 IPR000952 AB hydrolase 4, conserved site DM55_RS08435 IPR012020 AB hydrolase 4 family DM55_RS08445 IPR002201 Glycosyl transferase, family 9 DM55_RS08445 IPR011910 ADP-heptose--LPS heptosyltransferase 2 DM55_RS08455 IPR018300 Aminotransferase, class IV, conserved site DM55_RS08455 IPR036038 Aminotransferase-like, PLP-dependent enzymes DM55_RS08455 IPR005785 Branched-chain amino acid aminotransferase I DM55_RS08455 IPR033939 Branched-chain aminotransferase DM55_RS08455 IPR001544 Aminotransferase class IV DM55_RS08470 IPR015824 Phosphoglycerate kinase, N-terminal DM55_RS08470 IPR015911 Phosphoglycerate kinase, conserved site DM55_RS08470 IPR001576 Phosphoglycerate kinase DM55_RS08470 IPR036043 Phosphoglycerate kinase superfamily DM55_RS08475 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DM55_RS08475 IPR011037 Pyruvate kinase-like, insert domain superfamily DM55_RS08475 IPR040442 Pyruvate kinase-like domain superfamily DM55_RS08475 IPR015795 Pyruvate kinase, C-terminal DM55_RS08475 IPR036918 Pyruvate kinase, C-terminal domain superfamily DM55_RS08475 IPR001697 Pyruvate kinase DM55_RS08475 IPR015806 Pyruvate kinase, insert domain superfamily DM55_RS08475 IPR018209 Pyruvate kinase, active site DM55_RS08475 IPR015793 Pyruvate kinase, barrel DM55_RS08480 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype DM55_RS08480 IPR000771 Fructose-bisphosphate aldolase, class-II DM55_RS08480 IPR013785 Aldolase-type TIM barrel DM55_RS08485 IPR028923 SAICAR synthetase/ADE2, N-terminal DM55_RS08485 IPR018236 SAICAR synthetase, conserved site DM55_RS08485 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase DM55_RS08490 IPR024694 PurE, prokaryotic type DM55_RS08490 IPR000031 PurE domain DM55_RS08490 IPR033747 Class I PurE DM55_RS08490 IPR035893 PurE domain superfamily DM55_RS08495 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS08495 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain DM55_RS08495 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit DM55_RS08495 IPR011054 Rudiment single hybrid motif DM55_RS08495 IPR011761 ATP-grasp fold DM55_RS08495 IPR016185 Pre-ATP-grasp domain superfamily DM55_RS08495 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DM55_RS08500 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily DM55_RS08500 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 DM55_RS08500 IPR006070 YrdC-like domain DM55_RS08500 IPR005145 Putative GTP-binding controlling metal-binding domain DM55_RS08500 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DM55_RS08515 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C DM55_RS08515 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS08520 IPR039420 Transcriptional regulatory protein WalR-like DM55_RS08520 IPR011006 CheY-like superfamily DM55_RS08520 IPR001867 OmpR/PhoB-type DNA-binding domain DM55_RS08520 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS08520 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS08520 IPR001789 Signal transduction response regulator, receiver domain DM55_RS08525 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS08525 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS08525 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS08525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS08525 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS08525 IPR005467 Histidine kinase domain DM55_RS08530 IPR036034 PDZ superfamily DM55_RS08530 IPR011782 Peptidase S1C, Do DM55_RS08530 IPR009003 Peptidase S1, PA clan DM55_RS08530 IPR001940 Peptidase S1C DM55_RS08530 IPR001478 PDZ domain DM55_RS08550 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DM55_RS08550 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS08550 IPR009057 Homeobox-like domain superfamily DM55_RS08550 IPR013572 Transcription regulator MAATS, C-terminal DM55_RS08550 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DM55_RS08555 IPR006143 RND efflux pump, membrane fusion protein DM55_RS08555 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DM55_RS08560 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DM55_RS08560 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DM55_RS08560 IPR001036 Acriflavin resistance protein DM55_RS08565 IPR003423 Outer membrane efflux protein DM55_RS08565 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DM55_RS08570 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS08570 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS08570 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS08580 IPR036397 Ribonuclease H superfamily DM55_RS08580 IPR012337 Ribonuclease H-like superfamily DM55_RS08580 IPR025948 HTH-like domain DM55_RS08580 IPR001584 Integrase, catalytic core DM55_RS08585 IPR002514 Transposase IS3/IS911family DM55_RS08585 IPR009057 Homeobox-like domain superfamily DM55_RS08590 IPR006043 Xanthine/uracil/vitamin C permease DM55_RS08590 IPR006042 Xanthine/uracil permease DM55_RS08590 IPR017588 Uric acid permease UacT-like DM55_RS08595 IPR000577 Carbohydrate kinase, FGGY DM55_RS08595 IPR018485 Carbohydrate kinase, FGGY, C-terminal DM55_RS08595 IPR018483 Carbohydrate kinase, FGGY, conserved site DM55_RS08595 IPR018484 Carbohydrate kinase, FGGY, N-terminal DM55_RS08600 IPR029062 Class I glutamine amidotransferase-like DM55_RS08600 IPR002818 DJ-1/PfpI DM55_RS08600 IPR009057 Homeobox-like domain superfamily DM55_RS08600 IPR018060 DNA binding HTH domain, AraC-type DM55_RS08600 IPR018062 HTH domain AraC-type, conserved site DM55_RS08605 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS08605 IPR014183 Alcohol dehydrogenase class III DM55_RS08605 IPR036291 NAD(P)-binding domain superfamily DM55_RS08605 IPR011032 GroES-like superfamily DM55_RS08605 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DM55_RS08605 IPR013154 Alcohol dehydrogenase, N-terminal DM55_RS08610 IPR029058 Alpha/Beta hydrolase fold DM55_RS08610 IPR014186 S-formylglutathione hydrolase DM55_RS08610 IPR000801 Putative esterase DM55_RS08615 IPR001626 ABC transporter, TroCD-like DM55_RS08615 IPR037294 ABC transporter, BtuC-like DM55_RS08620 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08620 IPR017871 ABC transporter, conserved site DM55_RS08620 IPR003439 ABC transporter-like DM55_RS08620 IPR003593 AAA+ ATPase domain DM55_RS08630 IPR002481 Ferric-uptake regulator DM55_RS08630 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS08630 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS08635 IPR036291 NAD(P)-binding domain superfamily DM55_RS08635 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS08635 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS08640 IPR011611 Carbohydrate kinase PfkB DM55_RS08640 IPR000595 Cyclic nucleotide-binding domain DM55_RS08640 IPR029056 Ribokinase-like DM55_RS08645 IPR013785 Aldolase-type TIM barrel DM55_RS08645 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ DM55_RS08645 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ-like DM55_RS08655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS08655 IPR035906 MetI-like superfamily DM55_RS08660 IPR035906 MetI-like superfamily DM55_RS08660 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS08665 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DM55_RS08665 IPR036412 HAD-like superfamily DM55_RS08665 IPR010976 Beta-phosphoglucomutase hydrolase DM55_RS08665 IPR023214 HAD superfamily DM55_RS08665 IPR041492 Haloacid dehalogenase-like hydrolase DM55_RS08665 IPR006439 HAD hydrolase, subfamily IA DM55_RS08665 IPR010972 Beta-phosphoglucomutase DM55_RS08670 IPR013611 Transport-associated OB, type 2 DM55_RS08670 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08670 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS08670 IPR015855 ABC transporter, maltose/maltodextrin import, MalK DM55_RS08670 IPR003593 AAA+ ATPase domain DM55_RS08670 IPR017871 ABC transporter, conserved site DM55_RS08670 IPR003439 ABC transporter-like DM55_RS08680 IPR000847 Transcription regulator HTH, LysR DM55_RS08680 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS08680 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS08680 IPR005119 LysR, substrate-binding DM55_RS08685 IPR023650 Beta-lactamase, class-A active site DM55_RS08685 IPR001466 Beta-lactamase-related DM55_RS08685 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS08690 IPR011701 Major facilitator superfamily DM55_RS08690 IPR036259 MFS transporter superfamily DM55_RS08690 IPR020846 Major facilitator superfamily domain DM55_RS08695 IPR037171 NagB/RpiA transferase-like DM55_RS08695 IPR007324 Sugar-binding domain, putative DM55_RS08695 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS08700 IPR006000 Xylulokinase DM55_RS08700 IPR018484 Carbohydrate kinase, FGGY, N-terminal DM55_RS08700 IPR018485 Carbohydrate kinase, FGGY, C-terminal DM55_RS08700 IPR000577 Carbohydrate kinase, FGGY DM55_RS08700 IPR018483 Carbohydrate kinase, FGGY, conserved site DM55_RS08705 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DM55_RS08705 IPR036291 NAD(P)-binding domain superfamily DM55_RS08705 IPR013131 Mannitol dehydrogenase, N-terminal DM55_RS08705 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS08705 IPR000669 Mannitol dehydrogenase DM55_RS08705 IPR013118 Mannitol dehydrogenase, C-terminal DM55_RS08710 IPR005119 LysR, substrate-binding DM55_RS08710 IPR000847 Transcription regulator HTH, LysR DM55_RS08710 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS08710 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS08715 IPR000399 TPP-binding enzyme, conserved site DM55_RS08715 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DM55_RS08715 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DM55_RS08715 IPR029061 Thiamin diphosphate-binding fold DM55_RS08715 IPR029035 DHS-like NAD/FAD-binding domain superfamily DM55_RS08715 IPR012000 Thiamine pyrophosphate enzyme, central domain DM55_RS08720 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS08720 IPR015590 Aldehyde dehydrogenase domain DM55_RS08720 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS08720 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS08720 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS08725 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS08725 IPR036291 NAD(P)-binding domain superfamily DM55_RS08725 IPR013332 Ketopantoate reductase, N-terminal domain DM55_RS08725 IPR013752 Ketopantoate reductase, C-terminal domain DM55_RS08725 IPR003710 Ketopantoate reductase ApbA/PanE DM55_RS08725 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DM55_RS08735 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family DM55_RS08735 IPR005829 Sugar transporter, conserved site DM55_RS08735 IPR036259 MFS transporter superfamily DM55_RS08735 IPR020846 Major facilitator superfamily domain DM55_RS08735 IPR011701 Major facilitator superfamily DM55_RS08740 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like DM55_RS08740 IPR017485 Tryptophan 2,3-dioxygenase, bacterial DM55_RS08740 IPR004981 Tryptophan 2,3-dioxygenase DM55_RS08745 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS08745 IPR000192 Aminotransferase class V domain DM55_RS08745 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS08745 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS08745 IPR010111 Kynureninase DM55_RS08750 IPR007325 Kynurenine formamidase/cyclase-like DM55_RS08750 IPR037175 Kynurenine formamidase superfamily DM55_RS08750 IPR017484 Kynurenine formamidase, bacteria DM55_RS08755 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS08755 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS08755 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DM55_RS08755 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DM55_RS08755 IPR019888 Transcription regulator AsnC-type DM55_RS08755 IPR011008 Dimeric alpha-beta barrel DM55_RS08755 IPR000485 AsnC-type HTH domain DM55_RS08755 IPR011991 ArsR-like helix-turn-helix domain DM55_RS08760 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS08760 IPR002563 Flavin reductase like domain DM55_RS08760 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS08760 IPR012349 FMN-binding split barrel DM55_RS08770 IPR002569 Peptide methionine sulphoxide reductase MsrA DM55_RS08770 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily DM55_RS08785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS08785 IPR003333 Mycolic acid cyclopropane synthase DM55_RS08790 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal DM55_RS08790 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative DM55_RS08790 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site DM55_RS08790 IPR000659 Pyridoxamine 5'-phosphate oxidase DM55_RS08790 IPR012349 FMN-binding split barrel DM55_RS08795 IPR035985 Ubiquitin-activating enzyme DM55_RS08795 IPR000594 THIF-type NAD/FAD binding fold DM55_RS08810 IPR003829 Pirin, N-terminal domain DM55_RS08810 IPR011051 RmlC-like cupin domain superfamily DM55_RS08810 IPR008778 Pirin, C-terminal domain DM55_RS08810 IPR012093 Pirin DM55_RS08810 IPR014710 RmlC-like jelly roll fold DM55_RS08815 IPR000620 EamA domain DM55_RS08820 IPR021731 AMIN domain DM55_RS08820 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain DM55_RS08820 IPR006311 Twin-arginine translocation pathway, signal sequence DM55_RS08825 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE DM55_RS08825 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08830 IPR004453 Epoxyqueuosine reductase QueG DM55_RS08830 IPR009051 Alpha-helical ferredoxin DM55_RS08830 IPR013542 Domain of unknown function DUF1730 DM55_RS08830 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS08830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS08840 IPR002104 Integrase, catalytic domain DM55_RS08840 IPR011010 DNA breaking-rejoining enzyme, catalytic core DM55_RS08840 IPR013762 Integrase-like, catalytic domain superfamily DM55_RS08840 IPR010998 Integrase/recombinase, N-terminal DM55_RS08840 IPR004107 Integrase, SAM-like, N-terminal DM55_RS08840 IPR011932 Tyrosine recombinase XerD DM55_RS08840 IPR023009 Tyrosine recombinase XerC/XerD DM55_RS08845 IPR020459 AMP-binding DM55_RS08845 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS08845 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS08845 IPR020845 AMP-binding, conserved site DM55_RS08845 IPR000873 AMP-dependent synthetase/ligase DM55_RS08850 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DM55_RS08850 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily DM55_RS08850 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DM55_RS08855 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY DM55_RS08860 IPR035570 UPF0234, N-terminal DM55_RS08860 IPR007551 Protein of unknown function DUF520 DM55_RS08860 IPR035571 UPF0234-like, C-terminal DM55_RS08860 IPR036183 YajQ-like superfamily DM55_RS08865 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily DM55_RS08865 IPR016167 FAD-binding, type PCMH, subdomain 1 DM55_RS08865 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase DM55_RS08865 IPR016166 FAD-binding domain, PCMH-type DM55_RS08865 IPR036318 FAD-binding, type PCMH-like superfamily DM55_RS08865 IPR016169 FAD-binding, type PCMH, subdomain 2 DM55_RS08865 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal DM55_RS08865 IPR006094 FAD linked oxidase, N-terminal DM55_RS08870 IPR024904 Ornithine carbamoyltransferase DM55_RS08870 IPR002292 Ornithine/putrescine carbamoyltransferase DM55_RS08870 IPR006130 Aspartate/ornithine carbamoyltransferase DM55_RS08870 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DM55_RS08870 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DM55_RS08870 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DM55_RS08880 IPR002583 Ribosomal protein S20 DM55_RS08880 IPR036510 Ribosomal protein S20 superfamily DM55_RS08885 IPR004268 Peptidoglycan biosynthesis protein MurJ DM55_RS08890 IPR019734 Tetratricopeptide repeat DM55_RS08890 IPR011990 Tetratricopeptide-like helical domain superfamily DM55_RS08890 IPR013026 Tetratricopeptide repeat-containing domain DM55_RS08890 IPR032698 Protein SirB1, N-terminal DM55_RS08895 IPR036291 NAD(P)-binding domain superfamily DM55_RS08895 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS08895 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS08905 IPR011707 Multicopper oxidase, type 3 DM55_RS08905 IPR002355 Multicopper oxidase, copper-binding site DM55_RS08905 IPR011706 Multicopper oxidase, type 2 DM55_RS08905 IPR008972 Cupredoxin DM55_RS08905 IPR033138 Multicopper oxidases, conserved site DM55_RS08910 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site DM55_RS08910 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic DM55_RS08910 IPR024084 Isopropylmalate dehydrogenase-like domain DM55_RS08915 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DM55_RS08915 IPR020103 Pseudouridine synthase, catalytic domain superfamily DM55_RS08915 IPR006145 Pseudouridine synthase, RsuA/RluA DM55_RS08915 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DM55_RS08915 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DM55_RS08920 IPR001584 Integrase, catalytic core DM55_RS08920 IPR012337 Ribonuclease H-like superfamily DM55_RS08920 IPR036397 Ribonuclease H superfamily DM55_RS08920 IPR025948 HTH-like domain DM55_RS08930 IPR013762 Integrase-like, catalytic domain superfamily DM55_RS08930 IPR002104 Integrase, catalytic domain DM55_RS08930 IPR011010 DNA breaking-rejoining enzyme, catalytic core DM55_RS08930 IPR025166 Integrase, DNA-binding domain DM55_RS08930 IPR010998 Integrase/recombinase, N-terminal DM55_RS08930 IPR004107 Integrase, SAM-like, N-terminal DM55_RS08930 IPR038488 Integrase, DNA-binding domain superfamily DM55_RS08935 IPR036397 Ribonuclease H superfamily DM55_RS08935 IPR025948 HTH-like domain DM55_RS08935 IPR001584 Integrase, catalytic core DM55_RS08935 IPR012337 Ribonuclease H-like superfamily DM55_RS08940 IPR036397 Ribonuclease H superfamily DM55_RS08940 IPR012337 Ribonuclease H-like superfamily DM55_RS08940 IPR025948 HTH-like domain DM55_RS08940 IPR001584 Integrase, catalytic core DM55_RS08950 IPR009057 Homeobox-like domain superfamily DM55_RS08950 IPR002514 Transposase IS3/IS911family DM55_RS08975 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DM55_RS08975 IPR012910 TonB-dependent receptor, plug domain DM55_RS08975 IPR037066 TonB-dependent receptor, plug domain superfamily DM55_RS08975 IPR000531 TonB-dependent receptor-like, beta-barrel DM55_RS08975 IPR010105 TonB-dependent siderophore receptor DM55_RS08975 IPR039426 Vitamin B12 transporter BtuB-like DM55_RS09015 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS09015 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS09015 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS09020 IPR000146 Fructose-1,6-bisphosphatase class 1 DM55_RS09020 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal DM55_RS09020 IPR028343 Fructose-1,6-bisphosphatase DM55_RS09025 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain DM55_RS09025 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS09025 IPR000847 Transcription regulator HTH, LysR DM55_RS09025 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS09025 IPR005119 LysR, substrate-binding DM55_RS09030 IPR038071 UROD/MetE-like superfamily DM55_RS09030 IPR006276 Cobalamin-independent methionine synthase DM55_RS09030 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal DM55_RS09030 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal DM55_RS09035 IPR014782 Peptidase M1, membrane alanine aminopeptidase DM55_RS09035 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily DM55_RS09035 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DM55_RS09035 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DM55_RS09035 IPR042097 Aminopeptidase N-like , N-terminal DM55_RS09035 IPR027268 Peptidase M4/M1, CTD superfamily DM55_RS09035 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold DM55_RS09035 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily DM55_RS09035 IPR012779 Peptidase M1, alanyl aminopeptidase DM55_RS09045 IPR001727 Gdt1 family DM55_RS09050 IPR006680 Amidohydrolase-related DM55_RS09050 IPR014311 Guanine deaminase DM55_RS09050 IPR032466 Metal-dependent hydrolase DM55_RS09050 IPR011059 Metal-dependent hydrolase, composite domain superfamily DM55_RS09055 IPR026033 Azaguanine-like transporters DM55_RS09055 IPR006043 Xanthine/uracil/vitamin C permease DM55_RS09060 IPR001365 Adenosine/AMP deaminase domain DM55_RS09060 IPR028892 Adenine deaminase type 2 DM55_RS09060 IPR006330 Adenosine/adenine deaminase DM55_RS09060 IPR032466 Metal-dependent hydrolase DM55_RS09070 IPR003752 Disulphide bond formation protein DsbB/BdbC DM55_RS09070 IPR022920 Disulphide bond formation protein DsbB DM55_RS09070 IPR023380 DsbB-like superfamily DM55_RS09075 IPR023631 Amidase signature domain DM55_RS09075 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit DM55_RS09075 IPR036928 Amidase signature (AS) superfamily DM55_RS09075 IPR020556 Amidase, conserved site DM55_RS09075 IPR000120 Amidase DM55_RS09080 IPR017926 Glutamine amidotransferase DM55_RS09080 IPR011697 Peptidase C26 DM55_RS09080 IPR029062 Class I glutamine amidotransferase-like DM55_RS09085 IPR005829 Sugar transporter, conserved site DM55_RS09085 IPR004736 MFS transporter, metabolite:H symporter DM55_RS09085 IPR036259 MFS transporter superfamily DM55_RS09085 IPR020846 Major facilitator superfamily domain DM55_RS09085 IPR011701 Major facilitator superfamily DM55_RS09095 IPR002938 FAD-binding domain DM55_RS09095 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS09105 IPR036010 2Fe-2S ferredoxin-like superfamily DM55_RS09105 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding DM55_RS09105 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DM55_RS09105 IPR006656 Molybdopterin oxidoreductase DM55_RS09105 IPR006657 Molybdopterin dinucleotide-binding domain DM55_RS09105 IPR006478 Formate dehydrogenase, alpha subunit DM55_RS09105 IPR041924 Formate dehydrogenase H, N-terminal DM55_RS09105 IPR009010 Aspartate decarboxylase-like domain superfamily DM55_RS09105 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS09105 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS09105 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DM55_RS09110 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DM55_RS09110 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DM55_RS09110 IPR011537 NADH ubiquinone oxidoreductase, F subunit DM55_RS09110 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain DM55_RS09110 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site DM55_RS09110 IPR019554 Soluble ligand binding domain DM55_RS09110 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily DM55_RS09120 IPR010093 SinI-like, DNA-binding domain DM55_RS09120 IPR041657 Helix-turn-helix domain, group 17 DM55_RS09120 IPR009061 Putative DNA-binding domain superfamily DM55_RS09120 IPR024370 PBP domain DM55_RS09130 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal DM55_RS09130 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DM55_RS09130 IPR011530 Ribosomal RNA adenine dimethylase DM55_RS09130 IPR023165 rRNA adenine dimethylase-like DM55_RS09130 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site DM55_RS09130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS09135 IPR012337 Ribonuclease H-like superfamily DM55_RS09135 IPR001584 Integrase, catalytic core DM55_RS09135 IPR025948 HTH-like domain DM55_RS09135 IPR036397 Ribonuclease H superfamily DM55_RS09140 IPR009057 Homeobox-like domain superfamily DM55_RS09140 IPR002514 Transposase IS3/IS911family DM55_RS09145 IPR041492 Haloacid dehalogenase-like hydrolase DM55_RS09145 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic DM55_RS09145 IPR006439 HAD hydrolase, subfamily IA DM55_RS09145 IPR023214 HAD superfamily DM55_RS09145 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DM55_RS09145 IPR036412 HAD-like superfamily DM55_RS09150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS09150 IPR010233 Ubiquinone biosynthesis O-methyltransferase DM55_RS09155 IPR006664 Outer membrane protein, bacterial DM55_RS09155 IPR006690 Outer membrane protein, OmpA-like, conserved site DM55_RS09155 IPR036737 OmpA-like domain superfamily DM55_RS09155 IPR006665 OmpA-like domain DM55_RS09160 IPR005743 DNA gyrase, subunit A DM55_RS09160 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat DM55_RS09160 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DM55_RS09160 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DM55_RS09160 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DM55_RS09160 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DM55_RS09160 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily DM55_RS09170 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS09170 IPR000192 Aminotransferase class V domain DM55_RS09170 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DM55_RS09170 IPR022278 Phosphoserine aminotransferase DM55_RS09170 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS09170 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS09175 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase DM55_RS09175 IPR001086 Prephenate dehydratase DM55_RS09175 IPR036263 Chorismate mutase type II superfamily DM55_RS09175 IPR002912 ACT domain DM55_RS09175 IPR036979 Chorismate mutase domain superfamily DM55_RS09175 IPR002701 Chorismate mutase II, prokaryotic-type DM55_RS09175 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain DM55_RS09175 IPR018528 Prephenate dehydratase, conserved site DM55_RS09180 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase DM55_RS09180 IPR001986 Enolpyruvate transferase domain DM55_RS09180 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DM55_RS09180 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site DM55_RS09180 IPR036968 Enolpyruvate transferase domain superfamily DM55_RS09185 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09185 IPR003136 Cytidylate kinase DM55_RS09185 IPR011994 Cytidylate kinase domain DM55_RS09190 IPR003029 S1 domain DM55_RS09190 IPR022967 RNA-binding domain, S1 DM55_RS09190 IPR012340 Nucleic acid-binding, OB-fold DM55_RS09190 IPR000110 Ribosomal protein S1 DM55_RS09195 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DM55_RS09195 IPR000119 Histone-like DNA-binding protein DM55_RS09195 IPR005685 Integration host factor, beta subunit DM55_RS09210 IPR030865 Lipopolysaccharide assembly protein B DM55_RS09210 IPR041166 LapB, rubredoxin metal binding domain DM55_RS09210 IPR013026 Tetratricopeptide repeat-containing domain DM55_RS09210 IPR011990 Tetratricopeptide-like helical domain superfamily DM55_RS09210 IPR019734 Tetratricopeptide repeat DM55_RS09215 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type DM55_RS09215 IPR036291 NAD(P)-binding domain superfamily DM55_RS09215 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal DM55_RS09215 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal DM55_RS09215 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS09215 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily DM55_RS09215 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation DM55_RS09215 IPR017476 UDP-glucose/GDP-mannose dehydrogenase DM55_RS09220 IPR029056 Ribokinase-like DM55_RS09220 IPR011913 RfaE bifunctional protein, domain I DM55_RS09220 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DM55_RS09220 IPR011611 Carbohydrate kinase PfkB DM55_RS09225 IPR001509 NAD-dependent epimerase/dehydratase DM55_RS09225 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase DM55_RS09225 IPR036291 NAD(P)-binding domain superfamily DM55_RS09240 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS09240 IPR001926 Pyridoxal-phosphate dependent enzyme DM55_RS09240 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site DM55_RS09240 IPR005858 Cysteine synthase CysM DM55_RS09240 IPR005856 Cysteine synthase DM55_RS09245 IPR011757 Lytic transglycosylase MltB DM55_RS09245 IPR031304 Transglycosylase SLT domain 2 DM55_RS09245 IPR023346 Lysozyme-like domain superfamily DM55_RS09250 IPR023696 Ureohydrolase domain superfamily DM55_RS09250 IPR037138 Histone deacetylase domain superfamily DM55_RS09250 IPR023801 Histone deacetylase domain DM55_RS09250 IPR000286 Histone deacetylase family DM55_RS09255 IPR022742 Serine aminopeptidase, S33 DM55_RS09255 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS09255 IPR029058 Alpha/Beta hydrolase fold DM55_RS09260 IPR003593 AAA+ ATPase domain DM55_RS09260 IPR026253 Methionine import ATP-binding protein MetN DM55_RS09260 IPR003439 ABC transporter-like DM55_RS09260 IPR017871 ABC transporter, conserved site DM55_RS09260 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal DM55_RS09260 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain DM55_RS09260 IPR018449 NIL domain DM55_RS09260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09265 IPR035906 MetI-like superfamily DM55_RS09265 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS09270 IPR004872 Lipoprotein NlpA family DM55_RS09275 IPR012255 Electron transfer flavoprotein, beta subunit DM55_RS09275 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal DM55_RS09275 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DM55_RS09275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS09275 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site DM55_RS09280 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal DM55_RS09280 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal DM55_RS09280 IPR001308 Electron transfer flavoprotein alpha subunit/FixB DM55_RS09280 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site DM55_RS09280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS09280 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DM55_RS09280 IPR029035 DHS-like NAD/FAD-binding domain superfamily DM55_RS09290 IPR006076 FAD dependent oxidoreductase DM55_RS09290 IPR023080 D-amino acid dehydrogenase DadA DM55_RS09290 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS09295 IPR011991 ArsR-like helix-turn-helix domain DM55_RS09295 IPR000485 AsnC-type HTH domain DM55_RS09295 IPR011008 Dimeric alpha-beta barrel DM55_RS09295 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DM55_RS09295 IPR019888 Transcription regulator AsnC-type DM55_RS09295 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS09295 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS09295 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DM55_RS09315 IPR023803 Ribosomal protein S16 domain superfamily DM55_RS09315 IPR000307 Ribosomal protein S16 DM55_RS09320 IPR027275 PRC-barrel domain DM55_RS09320 IPR011033 PRC-barrel-like superfamily DM55_RS09320 IPR002676 RimM, N-terminal DM55_RS09320 IPR036976 RimM, N-terminal domain superfamily DM55_RS09320 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS09320 IPR011961 16S rRNA processing protein RimM DM55_RS09325 IPR029028 Alpha/beta knot methyltransferases DM55_RS09325 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal DM55_RS09325 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS09325 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria DM55_RS09325 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain DM55_RS09330 IPR018257 Ribosomal protein L19, conserved site DM55_RS09330 IPR001857 Ribosomal protein L19 DM55_RS09330 IPR038657 Ribosomal protein L19 superfamily DM55_RS09330 IPR008991 Translation protein SH3-like domain superfamily DM55_RS09340 IPR000086 NUDIX hydrolase domain DM55_RS09340 IPR023735 Uncharacterised nudix hydrolase NudL DM55_RS09340 IPR015797 NUDIX hydrolase-like domain superfamily DM55_RS09340 IPR000059 NUDIX hydrolase, NudL, conserved site DM55_RS09345 IPR031347 Protein AmpE DM55_RS09345 IPR004485 Cobalamin biosynthesis CobD/CbiB DM55_RS09355 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain DM55_RS09355 IPR012340 Nucleic acid-binding, OB-fold DM55_RS09355 IPR004881 Ribosome biogenesis GTPase RsgA DM55_RS09355 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09355 IPR010914 RsgA GTPase domain DM55_RS09355 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal DM55_RS09360 IPR022919 Peptidase M48, protease HtpX, putative DM55_RS09360 IPR001915 Peptidase M48 DM55_RS09365 IPR036397 Ribonuclease H superfamily DM55_RS09365 IPR012337 Ribonuclease H-like superfamily DM55_RS09365 IPR013520 Exonuclease, RNase T/DNA polymerase III DM55_RS09365 IPR022894 Oligoribonuclease DM55_RS09370 IPR008284 Molybdenum cofactor biosynthesis, conserved site DM55_RS09370 IPR036425 MoaB/Mog-like domain superfamily DM55_RS09370 IPR001453 MoaB/Mog domain DM55_RS09375 IPR023153 PSPTO4464-like domain superfamily DM55_RS09375 IPR006839 Ribosome-associated, YjgA DM55_RS09380 IPR002510 Metalloprotease TldD/PmbA DM55_RS09380 IPR035068 Metalloprotease TldD/PmbA, N-terminal DM55_RS09380 IPR036059 Metalloprotease TldD/PmbA superfamily DM55_RS09390 IPR001796 Dihydrofolate reductase domain DM55_RS09390 IPR017925 Dihydrofolate reductase conserved site DM55_RS09390 IPR012259 Dihydrofolate reductase DM55_RS09390 IPR024072 Dihydrofolate reductase-like domain superfamily DM55_RS09395 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS09395 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DM55_RS09395 IPR011006 CheY-like superfamily DM55_RS09395 IPR003593 AAA+ ATPase domain DM55_RS09395 IPR001789 Signal transduction response regulator, receiver domain DM55_RS09395 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS09395 IPR009057 Homeobox-like domain superfamily DM55_RS09395 IPR002197 DNA binding HTH domain, Fis-type DM55_RS09395 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09395 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS09420 IPR009057 Homeobox-like domain superfamily DM55_RS09420 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS09420 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DM55_RS09420 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS09420 IPR001789 Signal transduction response regulator, receiver domain DM55_RS09420 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09420 IPR011006 CheY-like superfamily DM55_RS09420 IPR002197 DNA binding HTH domain, Fis-type DM55_RS09420 IPR003593 AAA+ ATPase domain DM55_RS09420 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS09425 IPR000398 Thymidylate synthase DM55_RS09425 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily DM55_RS09425 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain DM55_RS09425 IPR020940 Thymidylate synthase, active site DM55_RS09440 IPR001845 HTH ArsR-type DNA-binding domain DM55_RS09440 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS09440 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS09440 IPR011991 ArsR-like helix-turn-helix domain DM55_RS09450 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase DM55_RS09450 IPR006683 Thioesterase domain DM55_RS09450 IPR029069 HotDog domain superfamily DM55_RS09450 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain DM55_RS09455 IPR008948 L-Aspartase-like DM55_RS09455 IPR022761 Fumarate lyase, N-terminal DM55_RS09455 IPR000362 Fumarate lyase family DM55_RS09455 IPR005677 Fumarate hydratase, class II DM55_RS09455 IPR024083 Fumarase/histidase, N-terminal DM55_RS09455 IPR018951 Fumarase C, C-terminal DM55_RS09455 IPR020557 Fumarate lyase, conserved site DM55_RS09465 IPR036397 Ribonuclease H superfamily DM55_RS09465 IPR025948 HTH-like domain DM55_RS09465 IPR012337 Ribonuclease H-like superfamily DM55_RS09465 IPR001584 Integrase, catalytic core DM55_RS09470 IPR002514 Transposase IS3/IS911family DM55_RS09470 IPR009057 Homeobox-like domain superfamily DM55_RS09475 IPR002528 Multi antimicrobial extrusion protein DM55_RS09480 IPR036986 RNA-binding S4 domain superfamily DM55_RS09480 IPR002942 RNA-binding S4 domain DM55_RS09495 IPR010292 Uncharacterised protein family CreA DM55_RS09510 IPR022569 Ferredoxin, C-terminal DM55_RS09510 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS09510 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS09510 IPR000813 7Fe ferredoxin DM55_RS09515 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal DM55_RS09515 IPR007229 Nicotinate phosphoribosyltransferase family DM55_RS09515 IPR006406 Nicotinate phosphoribosyltransferase DM55_RS09515 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain DM55_RS09515 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase DM55_RS09530 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DM55_RS09530 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM55_RS09530 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DM55_RS09530 IPR023756 Glyoxylate/hydroxypyruvate reductase B DM55_RS09530 IPR036291 NAD(P)-binding domain superfamily DM55_RS09535 IPR003798 DNA recombination RmuC DM55_RS09550 IPR005111 MoeA, C-terminal, domain IV DM55_RS09550 IPR036425 MoaB/Mog-like domain superfamily DM55_RS09550 IPR005110 MoeA, N-terminal and linker domain DM55_RS09550 IPR036688 MoeA, C-terminal, domain IV superfamily DM55_RS09550 IPR036135 MoeA, N-terminal and linker domain superfamily DM55_RS09550 IPR038987 Molybdopterin biosynthesis protein MoeA-like DM55_RS09550 IPR001453 MoaB/Mog domain DM55_RS09550 IPR008284 Molybdenum cofactor biosynthesis, conserved site DM55_RS09555 IPR013482 Molybdenum cofactor guanylyltransferase DM55_RS09555 IPR025877 MobA-like NTP transferase DM55_RS09555 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS09560 IPR013785 Aldolase-type TIM barrel DM55_RS09560 IPR010505 Molybdenum cofactor synthesis C-terminal DM55_RS09560 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site DM55_RS09560 IPR006638 Elp3/MiaB/NifB DM55_RS09560 IPR007197 Radical SAM DM55_RS09560 IPR013483 Molybdenum cofactor biosynthesis protein A DM55_RS09565 IPR012340 Nucleic acid-binding, OB-fold DM55_RS09565 IPR003029 S1 domain DM55_RS09565 IPR022967 RNA-binding domain, S1 DM55_RS09565 IPR004659 Ribonuclease E/G DM55_RS09565 IPR028878 Ribonuclease E DM55_RS09565 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DM55_RS09565 IPR021968 Polyribonucleotide phosphorylase C-terminal DM55_RS09570 IPR002942 RNA-binding S4 domain DM55_RS09570 IPR036986 RNA-binding S4 domain superfamily DM55_RS09570 IPR006225 Pseudouridine synthase, RluC/RluD DM55_RS09570 IPR020103 Pseudouridine synthase, catalytic domain superfamily DM55_RS09570 IPR006145 Pseudouridine synthase, RsuA/RluA DM55_RS09570 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DM55_RS09585 IPR004635 Peptidase S49, SppA DM55_RS09585 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS09585 IPR002142 Peptidase S49 DM55_RS09590 IPR000878 Tetrapyrrole methylase DM55_RS09590 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS09590 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS09590 IPR008189 rRNA small subunit methyltransferase I DM55_RS09590 IPR018063 SAM-dependent methyltransferase RsmI, conserved site DM55_RS09590 IPR035996 Tetrapyrrole methylase superfamily DM55_RS09595 IPR029001 Inosine triphosphate pyrophosphatase-like DM55_RS09595 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DM55_RS09600 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DM55_RS09600 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria DM55_RS09605 IPR002677 Ribosomal protein L32p DM55_RS09605 IPR011332 Zinc-binding ribosomal protein DM55_RS09610 IPR012281 Phospholipid biosynthesis protein, PlsX-like DM55_RS09610 IPR003664 Fatty acid synthesis PlsX protein DM55_RS09615 IPR016039 Thiolase-like DM55_RS09615 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 DM55_RS09615 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal DM55_RS09615 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM55_RS09620 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type DM55_RS09620 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DM55_RS09620 IPR001227 Acyl transferase domain superfamily DM55_RS09620 IPR024925 Malonyl CoA-acyl carrier protein transacylase DM55_RS09620 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS09620 IPR014043 Acyl transferase DM55_RS09625 IPR036291 NAD(P)-binding domain superfamily DM55_RS09625 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS09625 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS09625 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DM55_RS09630 IPR009081 Phosphopantetheine binding ACP domain DM55_RS09630 IPR003231 Acyl carrier protein (ACP) DM55_RS09630 IPR006162 Phosphopantetheine attachment site DM55_RS09630 IPR036736 ACP-like superfamily DM55_RS09635 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 DM55_RS09635 IPR018201 Beta-ketoacyl synthase, active site DM55_RS09635 IPR000794 Beta-ketoacyl synthase DM55_RS09635 IPR016039 Thiolase-like DM55_RS09635 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DM55_RS09635 IPR014030 Beta-ketoacyl synthase, N-terminal DM55_RS09635 IPR014031 Beta-ketoacyl synthase, C-terminal DM55_RS09645 IPR014286 RNA polymerase sigma-70 RpoE type DM55_RS09645 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DM55_RS09645 IPR039425 RNA polymerase sigma-70 like DM55_RS09645 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS09645 IPR013324 RNA polymerase sigma factor, region 3/4-like DM55_RS09645 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS09645 IPR014284 RNA polymerase sigma-70 like domain DM55_RS09645 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS09645 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site DM55_RS09655 IPR033436 MucB/RseB, C-terminal DM55_RS09655 IPR038484 MucB/RseB, C-terminal domain superfamily DM55_RS09655 IPR005588 MucB/RseB DM55_RS09655 IPR033434 MucB/RseB, N-terminal DM55_RS09660 IPR001478 PDZ domain DM55_RS09660 IPR036034 PDZ superfamily DM55_RS09660 IPR001940 Peptidase S1C DM55_RS09660 IPR009003 Peptidase S1, PA clan DM55_RS09660 IPR011782 Peptidase S1C, Do DM55_RS09670 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09670 IPR006297 Elongation factor 4 DM55_RS09670 IPR035647 EF-G domain III/V-like DM55_RS09670 IPR000795 Transcription factor, GTP-binding domain DM55_RS09670 IPR000640 Elongation factor EFG, domain V-like DM55_RS09670 IPR004161 Translation elongation factor EFTu-like, domain 2 DM55_RS09670 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS09670 IPR038363 LepA, C-terminal domain superfamily DM55_RS09670 IPR013842 GTP-binding protein LepA, C-terminal DM55_RS09670 IPR005225 Small GTP-binding protein domain DM55_RS09670 IPR035654 Elongation factor 4, domain IV DM55_RS09670 IPR031157 Tr-type G domain, conserved site DM55_RS09675 IPR019533 Peptidase S26 DM55_RS09675 IPR036286 LexA/Signal peptidase-like superfamily DM55_RS09675 IPR000223 Peptidase S26A, signal peptidase I DM55_RS09675 IPR019758 Peptidase S26A, signal peptidase I, conserved site DM55_RS09675 IPR019757 Peptidase S26A, signal peptidase I, lysine active site DM55_RS09675 IPR019756 Peptidase S26A, signal peptidase I, serine active site DM55_RS09680 IPR011907 Ribonuclease III DM55_RS09680 IPR000999 Ribonuclease III domain DM55_RS09680 IPR036389 Ribonuclease III, endonuclease domain superfamily DM55_RS09680 IPR014720 Double-stranded RNA-binding domain DM55_RS09685 IPR005225 Small GTP-binding protein domain DM55_RS09685 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09685 IPR009019 K homology domain superfamily, prokaryotic type DM55_RS09685 IPR004044 K Homology domain, type 2 DM55_RS09685 IPR015946 K homology domain-like, alpha/beta DM55_RS09685 IPR006073 GTP binding domain DM55_RS09685 IPR005662 GTP-binding protein Era DM55_RS09685 IPR030388 Era-type guanine nucleotide-binding (G) domain DM55_RS09690 IPR037278 ARFGAP/RecO-like zinc finger DM55_RS09690 IPR012340 Nucleic acid-binding, OB-fold DM55_RS09690 IPR003717 Recombination protein O, RecO DM55_RS09690 IPR022572 DNA replication/recombination mediator RecO, N-terminal DM55_RS09695 IPR036130 Pyridoxine 5'-phosphate synthase DM55_RS09695 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ DM55_RS09695 IPR013785 Aldolase-type TIM barrel DM55_RS09700 IPR037143 4'-phosphopantetheinyl transferase domain superfamily DM55_RS09700 IPR008278 4'-phosphopantetheinyl transferase domain DM55_RS09700 IPR004568 Phosphopantetheine-protein transferase domain DM55_RS09700 IPR002582 Holo-[acyl carrier protein] synthase DM55_RS09705 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DM55_RS09705 IPR001764 Glycoside hydrolase, family 3, N-terminal DM55_RS09705 IPR019800 Glycoside hydrolase, family 3, active site DM55_RS09705 IPR022956 Beta-hexosaminidase, bacterial DM55_RS09705 IPR017853 Glycoside hydrolase superfamily DM55_RS09710 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS09710 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS09710 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DM55_RS09710 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS09710 IPR001789 Signal transduction response regulator, receiver domain DM55_RS09710 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09710 IPR002197 DNA binding HTH domain, Fis-type DM55_RS09710 IPR009057 Homeobox-like domain superfamily DM55_RS09710 IPR011006 CheY-like superfamily DM55_RS09710 IPR003593 AAA+ ATPase domain DM55_RS09715 IPR014722 Ribosomal protein L2, domain 2 DM55_RS09715 IPR020599 Translation elongation factor P/YeiP DM55_RS09715 IPR013185 Translation elongation factor, KOW-like DM55_RS09715 IPR001059 Translation elongation factor P/YeiP, central DM55_RS09715 IPR013852 Translation elongation factor P/YeiP, conserved site DM55_RS09715 IPR011768 Translation elongation factor P DM55_RS09715 IPR008991 Translation protein SH3-like domain superfamily DM55_RS09715 IPR012340 Nucleic acid-binding, OB-fold DM55_RS09715 IPR015365 Elongation factor P, C-terminal DM55_RS09725 IPR001943 UVR domain DM55_RS09725 IPR010994 RuvA domain 2-like DM55_RS09725 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DM55_RS09725 IPR035901 GIY-YIG endonuclease superfamily DM55_RS09725 IPR000305 GIY-YIG endonuclease DM55_RS09725 IPR036876 UVR domain superfamily DM55_RS09725 IPR004791 UvrABC system, subunit C DM55_RS09725 IPR001162 UvrC family homology region DM55_RS09725 IPR038476 UvrC homology region 2 superfamily DM55_RS09730 IPR000462 CDP-alcohol phosphatidyltransferase DM55_RS09730 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase DM55_RS09730 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial DM55_RS09755 IPR029016 GAF-like domain superfamily DM55_RS09755 IPR003018 GAF domain DM55_RS09755 IPR000614 Free Met sulfoxide reductase conserved site DM55_RS09760 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS09760 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS09760 IPR005119 LysR, substrate-binding DM55_RS09760 IPR000847 Transcription regulator HTH, LysR DM55_RS09765 IPR012093 Pirin DM55_RS09765 IPR003829 Pirin, N-terminal domain DM55_RS09765 IPR014710 RmlC-like jelly roll fold DM55_RS09765 IPR011051 RmlC-like cupin domain superfamily DM55_RS09765 IPR008778 Pirin, C-terminal domain DM55_RS09770 IPR000182 GNAT domain DM55_RS09770 IPR016181 Acyl-CoA N-acyltransferase DM55_RS09785 IPR003782 Copper chaperone SCO1/SenC DM55_RS09785 IPR036249 Thioredoxin-like superfamily DM55_RS09790 IPR036412 HAD-like superfamily DM55_RS09790 IPR006379 HAD-superfamily hydrolase, subfamily IIB DM55_RS09790 IPR023214 HAD superfamily DM55_RS09790 IPR003337 Trehalose-phosphatase DM55_RS09795 IPR001830 Glycosyl transferase, family 20 DM55_RS09795 IPR012766 Alpha,alpha-trehalose-phosphate synthase DM55_RS09800 IPR003439 ABC transporter-like DM55_RS09800 IPR017871 ABC transporter, conserved site DM55_RS09800 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09800 IPR039421 Type I protein exporter DM55_RS09800 IPR003593 AAA+ ATPase domain DM55_RS09800 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS09800 IPR036640 ABC transporter type 1, transmembrane domain superfamily DM55_RS09805 IPR001296 Glycosyl transferase, family 1 DM55_RS09805 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DM55_RS09805 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA DM55_RS09820 IPR006036 Potassium uptake protein TrkA DM55_RS09820 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS09820 IPR006076 FAD dependent oxidoreductase DM55_RS09820 IPR023080 D-amino acid dehydrogenase DadA DM55_RS09825 IPR028081 Leucine-binding protein domain DM55_RS09825 IPR000709 Leu/Ile/Val-binding protein DM55_RS09825 IPR028082 Periplasmic binding protein-like I DM55_RS09845 IPR025948 HTH-like domain DM55_RS09845 IPR001584 Integrase, catalytic core DM55_RS09845 IPR036397 Ribonuclease H superfamily DM55_RS09845 IPR012337 Ribonuclease H-like superfamily DM55_RS09850 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DM55_RS09850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS09850 IPR035906 MetI-like superfamily DM55_RS09855 IPR003593 AAA+ ATPase domain DM55_RS09855 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DM55_RS09855 IPR003439 ABC transporter-like DM55_RS09855 IPR017871 ABC transporter, conserved site DM55_RS09855 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09860 IPR018060 DNA binding HTH domain, AraC-type DM55_RS09860 IPR020449 Transcription regulator HTH, AraC- type DM55_RS09860 IPR009057 Homeobox-like domain superfamily DM55_RS09860 IPR029062 Class I glutamine amidotransferase-like DM55_RS09860 IPR018062 HTH domain AraC-type, conserved site DM55_RS09865 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS09865 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS09865 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS09865 IPR005814 Aminotransferase class-III DM55_RS09865 IPR004636 Acetylornithine/Succinylornithine transaminase family DM55_RS09865 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria DM55_RS09870 IPR007041 Arginine N-succinyltransferase AstA/AruG DM55_RS09870 IPR017651 Arginine/ornithine succinyltransferase, alpha subunit DM55_RS09870 IPR016181 Acyl-CoA N-acyltransferase DM55_RS09875 IPR016181 Acyl-CoA N-acyltransferase DM55_RS09875 IPR017650 Arginine N-succinyltransferase DM55_RS09875 IPR007041 Arginine N-succinyltransferase AstA/AruG DM55_RS09880 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS09880 IPR016160 Aldehyde dehydrogenase, cysteine active site DM55_RS09880 IPR017649 Succinylglutamate-semialdehyde dehydrogenase DM55_RS09880 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS09880 IPR015590 Aldehyde dehydrogenase domain DM55_RS09880 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS09880 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS09885 IPR007079 Succinylarginine dihydrolase DM55_RS09885 IPR037031 Succinylarginine dihydrolase superfamily DM55_RS09890 IPR007036 Succinylglutamate desuccinylase/aspartoacylase DM55_RS09890 IPR016681 Succinylglutamate desuccinylase DM55_RS09900 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DM55_RS09900 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DM55_RS09900 IPR018313 Solute-binding protein family 3, conserved site DM55_RS09910 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes DM55_RS09910 IPR014210 Cytochrome o ubiquinol oxidase subunit IV DM55_RS09915 IPR024791 Cytochrome c oxidase subunit III DM55_RS09915 IPR000298 Cytochrome c oxidase subunit III-like DM55_RS09915 IPR035973 Cytochrome c oxidase subunit III-like superfamily DM55_RS09915 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle DM55_RS09915 IPR014206 Cytochrome o ubiquinol oxidase, subunit III DM55_RS09915 IPR033946 Ubiquinol oxidase subunit III domain DM55_RS09920 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site DM55_RS09920 IPR000883 Cytochrome c oxidase subunit I DM55_RS09920 IPR036927 Cytochrome c oxidase-like, subunit I superfamily DM55_RS09920 IPR014207 Cytochrome o ubiquinol oxidase, subunit I DM55_RS09920 IPR023616 Cytochrome c oxidase-like, subunit I domain DM55_RS09925 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain DM55_RS09925 IPR010514 COX aromatic rich motif DM55_RS09925 IPR002429 Cytochrome c oxidase subunit II-like C-terminal DM55_RS09925 IPR006333 Cytochrome o ubiquinol oxidase subunit II DM55_RS09925 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain DM55_RS09925 IPR008972 Cupredoxin DM55_RS09925 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily DM55_RS09935 IPR000944 Transcription regulator Rrf2-type DM55_RS09935 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS09935 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS09935 IPR030489 Transcription regulator Rrf2-type, conserved site DM55_RS09945 IPR002744 MIP18 family-like DM55_RS09945 IPR034904 Fe-S cluster assembly domain superfamily DM55_RS09950 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal DM55_RS09955 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS09955 IPR000192 Aminotransferase class V domain DM55_RS09955 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA DM55_RS09955 IPR010970 Cysteine desulfurase, SufS DM55_RS09955 IPR016454 Cysteine desulfurase DM55_RS09955 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS09955 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS09965 IPR010230 FeS cluster assembly SUF system, ATPase SufC DM55_RS09965 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09965 IPR017871 ABC transporter, conserved site DM55_RS09965 IPR003593 AAA+ ATPase domain DM55_RS09965 IPR003439 ABC transporter-like DM55_RS09980 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DM55_RS09980 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS09980 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DM55_RS09980 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS09980 IPR003660 HAMP domain DM55_RS09980 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DM55_RS09985 IPR006638 Elp3/MiaB/NifB DM55_RS09985 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN DM55_RS09985 IPR023404 Radical SAM, alpha/beta horseshoe DM55_RS09985 IPR034505 Anaerobic coproporphyrinogen-III oxidase DM55_RS09985 IPR010723 HemN, C-terminal DM55_RS09985 IPR007197 Radical SAM DM55_RS09990 IPR014710 RmlC-like jelly roll fold DM55_RS09990 IPR005821 Ion transport domain DM55_RS09990 IPR018488 Cyclic nucleotide-binding, conserved site DM55_RS09990 IPR018490 Cyclic nucleotide-binding-like DM55_RS09990 IPR000595 Cyclic nucleotide-binding domain DM55_RS09990 IPR028325 Voltage-gated potassium channel DM55_RS10005 IPR001539 Peptidase U32 DM55_RS10005 IPR036206 Thiamin phosphate synthase superfamily DM55_RS10010 IPR001539 Peptidase U32 DM55_RS10015 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT DM55_RS10015 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 DM55_RS10015 IPR036527 SCP2 sterol-binding domain superfamily DM55_RS10015 IPR003033 SCP2 sterol-binding domain DM55_RS10020 IPR014958 DGC DM55_RS10050 IPR002744 MIP18 family-like DM55_RS10050 IPR034904 Fe-S cluster assembly domain superfamily DM55_RS10055 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site DM55_RS10055 IPR023616 Cytochrome c oxidase-like, subunit I domain DM55_RS10055 IPR036927 Cytochrome c oxidase-like, subunit I superfamily DM55_RS10055 IPR000883 Cytochrome c oxidase subunit I DM55_RS10065 IPR033885 Alkane/xylene monooxygenase DM55_RS10065 IPR005804 Fatty acid desaturase domain DM55_RS10070 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal DM55_RS10070 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain DM55_RS10070 IPR002081 Cryptochrome/DNA photolyase class 1 DM55_RS10070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10070 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily DM55_RS10070 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily DM55_RS10070 IPR006050 DNA photolyase, N-terminal DM55_RS10075 IPR002891 Adenylyl-sulfate kinase DM55_RS10075 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10080 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain DM55_RS10080 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS10080 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS10080 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS10080 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily DM55_RS10100 IPR008948 L-Aspartase-like DM55_RS10100 IPR001106 Aromatic amino acid lyase DM55_RS10100 IPR024083 Fumarase/histidase, N-terminal DM55_RS10100 IPR005921 Histidine ammonia-lyase DM55_RS10100 IPR022313 Phenylalanine/histidine ammonia-lyases, active site DM55_RS10105 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS10105 IPR011663 UbiC transcription regulator-associated DM55_RS10105 IPR000524 Transcription regulator HTH, GntR DM55_RS10105 IPR010248 Histidine utilization repressor DM55_RS10105 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DM55_RS10105 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS10110 IPR035400 Urocanase, N-terminal domain DM55_RS10110 IPR035401 Urocanase, C-terminal domain DM55_RS10110 IPR038364 Urocanase, central domain superfamily DM55_RS10110 IPR023637 Urocanase DM55_RS10110 IPR036190 Urocanase superfamily DM55_RS10110 IPR023636 Urocanase conserved site DM55_RS10110 IPR035085 Urocanase, Rossmann-like domain DM55_RS10120 IPR011059 Metal-dependent hydrolase, composite domain superfamily DM55_RS10120 IPR032466 Metal-dependent hydrolase DM55_RS10120 IPR006680 Amidohydrolase-related DM55_RS10120 IPR005920 Imidazolonepropionase DM55_RS10125 IPR011059 Metal-dependent hydrolase, composite domain superfamily DM55_RS10125 IPR023512 Deaminase MtaD/DadD DM55_RS10125 IPR032466 Metal-dependent hydrolase DM55_RS10125 IPR006680 Amidohydrolase-related DM55_RS10150 IPR017926 Glutamine amidotransferase DM55_RS10150 IPR029062 Class I glutamine amidotransferase-like DM55_RS10150 IPR011697 Peptidase C26 DM55_RS10155 IPR008146 Glutamine synthetase, catalytic domain DM55_RS10155 IPR027303 Glutamine synthetase, glycine-rich site DM55_RS10155 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DM55_RS10155 IPR036651 Glutamine synthetase, N-terminal domain superfamily DM55_RS10160 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS10160 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS10160 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS10160 IPR005814 Aminotransferase class-III DM55_RS10165 IPR009057 Homeobox-like domain superfamily DM55_RS10165 IPR002514 Transposase IS3/IS911family DM55_RS10170 IPR036397 Ribonuclease H superfamily DM55_RS10170 IPR012337 Ribonuclease H-like superfamily DM55_RS10170 IPR001584 Integrase, catalytic core DM55_RS10170 IPR025948 HTH-like domain DM55_RS10185 IPR037423 HTH-type transcriptional regulator CysB, PBP2 domain DM55_RS10185 IPR005119 LysR, substrate-binding DM55_RS10185 IPR000847 Transcription regulator HTH, LysR DM55_RS10185 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS10185 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS10200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10200 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase DM55_RS10200 IPR011798 Adenosine 5'-phosphosulphate reductase DM55_RS10200 IPR002500 Phosphoadenosine phosphosulphate reductase DM55_RS10205 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10205 IPR011784 Sulphate adenylyltransferase, small subunit DM55_RS10205 IPR002500 Phosphoadenosine phosphosulphate reductase DM55_RS10210 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DM55_RS10210 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS10210 IPR011779 Sulphate adenylyltransferase, large subunit DM55_RS10210 IPR005225 Small GTP-binding protein domain DM55_RS10210 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10210 IPR031157 Tr-type G domain, conserved site DM55_RS10210 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain DM55_RS10210 IPR000795 Transcription factor, GTP-binding domain DM55_RS10215 IPR019478 Sirohaem synthase, dimerisation domain DM55_RS10215 IPR006367 Sirohaem synthase, N-terminal DM55_RS10215 IPR000878 Tetrapyrrole methylase DM55_RS10215 IPR035996 Tetrapyrrole methylase superfamily DM55_RS10215 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS10215 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS10215 IPR006366 Uroporphyrin-III C-methyltransferase DM55_RS10215 IPR037115 Sirohaem synthase, dimerisation domain superfamily DM55_RS10215 IPR036291 NAD(P)-binding domain superfamily DM55_RS10215 IPR012409 Sirohaem synthase DM55_RS10215 IPR028281 Siroheme synthase, central domain DM55_RS10215 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DM55_RS10230 IPR005495 Permease LptG/LptF-related DM55_RS10230 IPR030922 LPS export ABC transporter permease LptF DM55_RS10235 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B DM55_RS10235 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal DM55_RS10235 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal DM55_RS10235 IPR023042 Peptidase M17, leucine aminopeptidase DM55_RS10240 IPR007459 DNA polymerase III chi subunit, HolC DM55_RS10240 IPR036768 DNA polymerase III subunit chi superfamily DM55_RS10250 IPR009056 Cytochrome c-like domain DM55_RS10250 IPR036909 Cytochrome c-like domain superfamily DM55_RS10250 IPR002324 Cytochrome c, class ID DM55_RS10260 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase DM55_RS10260 IPR042096 Dihydroxy-acid dehydratase, C-terminal DM55_RS10260 IPR037237 IlvD/EDD, N-terminal domain DM55_RS10260 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site DM55_RS10260 IPR004404 Dihydroxy-acid dehydratase DM55_RS10265 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS10265 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS10265 IPR037412 HTH-type transcriptional regulator IlvR, PBP2 domain DM55_RS10265 IPR005119 LysR, substrate-binding DM55_RS10265 IPR000847 Transcription regulator HTH, LysR DM55_RS10270 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt DM55_RS10285 IPR036192 Cell division protein ZapA-like superfamily DM55_RS10285 IPR007838 Cell division protein ZapA-like DM55_RS10295 IPR012910 TonB-dependent receptor, plug domain DM55_RS10295 IPR000531 TonB-dependent receptor-like, beta-barrel DM55_RS10295 IPR010101 TonB-dependent vitamin B12 transporter BtuB DM55_RS10295 IPR039426 Vitamin B12 transporter BtuB-like DM55_RS10295 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DM55_RS10295 IPR037066 TonB-dependent receptor, plug domain superfamily DM55_RS10300 IPR037294 ABC transporter, BtuC-like DM55_RS10300 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC DM55_RS10300 IPR000522 ABC transporter, permease protein, BtuC-like DM55_RS10305 IPR003439 ABC transporter-like DM55_RS10305 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10305 IPR015863 ABC transporter, hemin import, HmuV DM55_RS10305 IPR017871 ABC transporter, conserved site DM55_RS10305 IPR003593 AAA+ ATPase domain DM55_RS10310 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like DM55_RS10310 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal DM55_RS10310 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic DM55_RS10310 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily DM55_RS10315 IPR003805 Adenosylcobinamide-GDP ribazoletransferase DM55_RS10330 IPR002491 ABC transporter periplasmic binding domain DM55_RS10330 IPR023544 ABC transporter, vitamin B12-binding protein DM55_RS10335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS10335 IPR005860 L-threonine-O-3-phosphate decarboxylase DM55_RS10335 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS10335 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DM55_RS10335 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS10335 IPR004839 Aminotransferase, class I/classII DM55_RS10340 IPR004485 Cobalamin biosynthesis CobD/CbiB DM55_RS10340 IPR031347 Protein AmpE DM55_RS10345 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10345 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase DM55_RS10350 IPR029062 Class I glutamine amidotransferase-like DM55_RS10350 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10350 IPR011698 CobB/CobQ-like glutamine amidotransferase DM55_RS10350 IPR004459 Cobyric acid synthase CobQ DM55_RS10350 IPR017929 CobB/CobQ glutamine amidotransferase DM55_RS10350 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DM55_RS10350 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 DM55_RS10355 IPR032808 DoxX family DM55_RS10360 IPR034904 Fe-S cluster assembly domain superfamily DM55_RS10360 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10360 IPR000808 Mrp, conserved site DM55_RS10360 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DM55_RS10360 IPR019591 Mrp/NBP35 ATP-binding protein DM55_RS10365 IPR009010 Aspartate decarboxylase-like domain superfamily DM55_RS10365 IPR003190 Aspartate decarboxylase DM55_RS10370 IPR004821 Cytidyltransferase-like domain DM55_RS10370 IPR003721 Pantoate-beta-alanine ligase DM55_RS10370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10370 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain DM55_RS10375 IPR003768 Segregation and condensation protein A DM55_RS10385 IPR000184 Bacterial surface antigen (D15) DM55_RS10385 IPR035243 TamA, POTRA domain 1 DM55_RS10385 IPR034746 POTRA domain DM55_RS10385 IPR010827 POTRA domain, BamA/TamA-like DM55_RS10385 IPR039910 Surface antigen D15-like DM55_RS10390 IPR007452 Translocation and assembly module TamB DM55_RS10400 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS10400 IPR016461 O-methyltransferase COMT-type DM55_RS10400 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS10400 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain DM55_RS10400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS10400 IPR001077 O-methyltransferase domain DM55_RS10405 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain DM55_RS10405 IPR012340 Nucleic acid-binding, OB-fold DM55_RS10405 IPR014758 Methionyl-tRNA synthetase DM55_RS10405 IPR015413 Methionyl/Leucyl tRNA synthetase DM55_RS10405 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS10405 IPR033911 Methioninyl-tRNA synthetase core domain DM55_RS10405 IPR029038 Methionyl-tRNA synthetase, Zn-domain DM55_RS10405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10405 IPR002547 tRNA-binding domain DM55_RS10405 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DM55_RS10405 IPR023458 Methionine-tRNA ligase, type 1 DM55_RS10405 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal DM55_RS10410 IPR008722 Outer membrane porin F, N-terminal DM55_RS10410 IPR006690 Outer membrane protein, OmpA-like, conserved site DM55_RS10410 IPR006665 OmpA-like domain DM55_RS10410 IPR006664 Outer membrane protein, bacterial DM55_RS10410 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DM55_RS10410 IPR036737 OmpA-like domain superfamily DM55_RS10415 IPR034904 Fe-S cluster assembly domain superfamily DM55_RS10415 IPR019591 Mrp/NBP35 ATP-binding protein DM55_RS10415 IPR000808 Mrp, conserved site DM55_RS10415 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10415 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DM55_RS10425 IPR033704 dUTPase, trimeric DM55_RS10425 IPR011962 dCTP deaminase DM55_RS10425 IPR036157 dUTPase-like superfamily DM55_RS10425 IPR029054 dUTPase-like DM55_RS10430 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily DM55_RS10430 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DM55_RS10430 IPR000310 Orn/Lys/Arg decarboxylase, major domain DM55_RS10430 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DM55_RS10430 IPR011193 Ornithine/lysine/arginine decarboxylase DM55_RS10430 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS10430 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS10430 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS10440 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DM55_RS10440 IPR023214 HAD superfamily DM55_RS10440 IPR041492 Haloacid dehalogenase-like hydrolase DM55_RS10440 IPR006439 HAD hydrolase, subfamily IA DM55_RS10440 IPR036412 HAD-like superfamily DM55_RS10445 IPR000362 Fumarate lyase family DM55_RS10445 IPR008948 L-Aspartase-like DM55_RS10445 IPR009049 Argininosuccinate lyase DM55_RS10445 IPR020557 Fumarate lyase, conserved site DM55_RS10445 IPR024083 Fumarase/histidase, N-terminal DM55_RS10445 IPR022761 Fumarate lyase, N-terminal DM55_RS10445 IPR029419 Argininosuccinate lyase, C-terminal DM55_RS10465 IPR036397 Ribonuclease H superfamily DM55_RS10465 IPR012337 Ribonuclease H-like superfamily DM55_RS10465 IPR001584 Integrase, catalytic core DM55_RS10465 IPR025948 HTH-like domain DM55_RS10470 IPR002514 Transposase IS3/IS911family DM55_RS10470 IPR009057 Homeobox-like domain superfamily DM55_RS10480 IPR001046 NRAMP family DM55_RS10500 IPR032466 Metal-dependent hydrolase DM55_RS10500 IPR006680 Amidohydrolase-related DM55_RS10505 IPR011701 Major facilitator superfamily DM55_RS10505 IPR020846 Major facilitator superfamily domain DM55_RS10505 IPR005829 Sugar transporter, conserved site DM55_RS10505 IPR036259 MFS transporter superfamily DM55_RS10510 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS10510 IPR000847 Transcription regulator HTH, LysR DM55_RS10510 IPR005119 LysR, substrate-binding DM55_RS10510 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain DM55_RS10510 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS10545 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain DM55_RS10545 IPR003660 HAMP domain DM55_RS10545 IPR011006 CheY-like superfamily DM55_RS10545 IPR001789 Signal transduction response regulator, receiver domain DM55_RS10545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS10545 IPR019247 Histidine kinase BarA, N-terminal DM55_RS10545 IPR036641 HPT domain superfamily DM55_RS10545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS10545 IPR005467 Histidine kinase domain DM55_RS10545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS10545 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS10545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS10550 IPR001789 Signal transduction response regulator, receiver domain DM55_RS10550 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS10550 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS10550 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS10550 IPR030864 Transcriptional regulatory protein RcsB DM55_RS10550 IPR011006 CheY-like superfamily DM55_RS10555 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DM55_RS10555 IPR003423 Outer membrane efflux protein DM55_RS10560 IPR003423 Outer membrane efflux protein DM55_RS10560 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DM55_RS10565 IPR020846 Major facilitator superfamily domain DM55_RS10565 IPR004638 Drug resistance transporter EmrB-like DM55_RS10565 IPR011701 Major facilitator superfamily DM55_RS10565 IPR036259 MFS transporter superfamily DM55_RS10570 IPR005694 Efflux pump membrane protein DM55_RS10570 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DM55_RS10575 IPR024906 Enoyl reductase FAD binding domain DM55_RS10575 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative DM55_RS10575 IPR010758 Trans-2-enoyl-CoA reductase DM55_RS10580 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DM55_RS10580 IPR017850 Alkaline-phosphatase-like, core domain superfamily DM55_RS10580 IPR017767 Bacterial phospholipase C, phosphocholine-specific DM55_RS10580 IPR007312 Phosphoesterase DM55_RS10580 IPR008475 Bacterial phospholipase C, C-terminal domain DM55_RS10580 IPR006311 Twin-arginine translocation pathway, signal sequence DM55_RS10585 IPR009056 Cytochrome c-like domain DM55_RS10585 IPR036909 Cytochrome c-like domain superfamily DM55_RS10585 IPR004852 Di-haem cytochrome c peroxidase DM55_RS10585 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase DM55_RS10585 IPR022394 Methylamine utilisation protein, MauG DM55_RS10595 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily DM55_RS10595 IPR001764 Glycoside hydrolase, family 3, N-terminal DM55_RS10595 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily DM55_RS10595 IPR019800 Glycoside hydrolase, family 3, active site DM55_RS10595 IPR017853 Glycoside hydrolase superfamily DM55_RS10605 IPR022927 RNA pyrophosphohydrolase RppH DM55_RS10605 IPR000086 NUDIX hydrolase domain DM55_RS10605 IPR020084 NUDIX hydrolase, conserved site DM55_RS10605 IPR015797 NUDIX hydrolase-like domain superfamily DM55_RS10605 IPR020476 NUDIX hydrolase DM55_RS10610 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS10610 IPR004514 Glutamine-tRNA synthetase DM55_RS10610 IPR022861 Glutamine-tRNA ligase, bacterial DM55_RS10610 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily DM55_RS10610 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DM55_RS10610 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain DM55_RS10610 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DM55_RS10610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10610 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal DM55_RS10610 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily DM55_RS10620 IPR023606 CoA-transferase family III domain superfamily DM55_RS10620 IPR003673 CoA-transferase family III DM55_RS10630 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DM55_RS10630 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS10630 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily DM55_RS10630 IPR003156 DHHA1 domain DM55_RS10630 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria DM55_RS10630 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal DM55_RS10630 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain DM55_RS10630 IPR002318 Alanine-tRNA ligase, class IIc DM55_RS10630 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily DM55_RS10635 IPR005119 LysR, substrate-binding DM55_RS10635 IPR000847 Transcription regulator HTH, LysR DM55_RS10635 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS10635 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS10645 IPR009057 Homeobox-like domain superfamily DM55_RS10645 IPR002514 Transposase IS3/IS911family DM55_RS10650 IPR025948 HTH-like domain DM55_RS10650 IPR001584 Integrase, catalytic core DM55_RS10650 IPR012337 Ribonuclease H-like superfamily DM55_RS10650 IPR036397 Ribonuclease H superfamily DM55_RS10655 IPR036259 MFS transporter superfamily DM55_RS10655 IPR010645 Uncharacterised MFS-type transporter YbfB DM55_RS10660 IPR001478 PDZ domain DM55_RS10660 IPR036034 PDZ superfamily DM55_RS10660 IPR011782 Peptidase S1C, Do DM55_RS10660 IPR009003 Peptidase S1, PA clan DM55_RS10660 IPR001940 Peptidase S1C DM55_RS10670 IPR022925 NADH pyrophosphatase NudC DM55_RS10670 IPR015376 Zinc ribbon, NADH pyrophosphatase DM55_RS10670 IPR015797 NUDIX hydrolase-like domain superfamily DM55_RS10670 IPR020476 NUDIX hydrolase DM55_RS10670 IPR000086 NUDIX hydrolase domain DM55_RS10670 IPR020084 NUDIX hydrolase, conserved site DM55_RS10675 IPR002765 Uncharacterised protein family UPF0145 DM55_RS10675 IPR035439 UPF0145 domain superfamily DM55_RS10680 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DM55_RS10680 IPR039697 Iron-type alcohol dehydrogenase-like DM55_RS10680 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA DM55_RS10685 IPR029069 HotDog domain superfamily DM55_RS10685 IPR006683 Thioesterase domain DM55_RS10690 IPR001851 ABC transporter, permease DM55_RS10695 IPR003593 AAA+ ATPase domain DM55_RS10695 IPR003439 ABC transporter-like DM55_RS10695 IPR017871 ABC transporter, conserved site DM55_RS10695 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10695 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DM55_RS10700 IPR017871 ABC transporter, conserved site DM55_RS10700 IPR003439 ABC transporter-like DM55_RS10700 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10700 IPR003593 AAA+ ATPase domain DM55_RS10700 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein DM55_RS10705 IPR024203 5-deoxy-glucuronate isomerase, IolB DM55_RS10705 IPR023770 5-deoxy-glucuronate isomerase, Bacilli DM55_RS10705 IPR021120 KduI/IolB isomerase DM55_RS10705 IPR014710 RmlC-like jelly roll fold DM55_RS10705 IPR011051 RmlC-like cupin domain superfamily DM55_RS10710 IPR013022 Xylose isomerase-like, TIM barrel domain DM55_RS10710 IPR036237 Xylose isomerase-like superfamily DM55_RS10710 IPR030823 IolE/MocC family DM55_RS10715 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase DM55_RS10715 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DM55_RS10715 IPR029035 DHS-like NAD/FAD-binding domain superfamily DM55_RS10715 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DM55_RS10715 IPR000399 TPP-binding enzyme, conserved site DM55_RS10715 IPR029061 Thiamin diphosphate-binding fold DM55_RS10715 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes DM55_RS10715 IPR012000 Thiamine pyrophosphate enzyme, central domain DM55_RS10720 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes DM55_RS10720 IPR030830 5-Dehydro-2-deoxygluconokinase DM55_RS10720 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DM55_RS10720 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily DM55_RS10720 IPR011611 Carbohydrate kinase PfkB DM55_RS10720 IPR029056 Ribokinase-like DM55_RS10725 IPR003593 AAA+ ATPase domain DM55_RS10725 IPR003439 ABC transporter-like DM55_RS10725 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10730 IPR001851 ABC transporter, permease DM55_RS10740 IPR001347 Sugar isomerase (SIS) DM55_RS10740 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS10740 IPR022821 Transcription regulator HTH, MurR DM55_RS10740 IPR035472 RpiR-like, SIS domain DM55_RS10740 IPR000281 Helix-turn-helix protein RpiR DM55_RS10740 IPR009057 Homeobox-like domain superfamily DM55_RS10745 IPR036291 NAD(P)-binding domain superfamily DM55_RS10745 IPR030827 Inositol 2-dehydrogenase DM55_RS10745 IPR004104 Oxidoreductase, C-terminal DM55_RS10745 IPR000683 Oxidoreductase, N-terminal DM55_RS10750 IPR030827 Inositol 2-dehydrogenase DM55_RS10750 IPR004104 Oxidoreductase, C-terminal DM55_RS10750 IPR036291 NAD(P)-binding domain superfamily DM55_RS10750 IPR000683 Oxidoreductase, N-terminal DM55_RS10755 IPR001455 TusA-like domain DM55_RS10755 IPR036868 TusA-like domain superfamily DM55_RS10765 IPR001867 OmpR/PhoB-type DNA-binding domain DM55_RS10765 IPR001789 Signal transduction response regulator, receiver domain DM55_RS10765 IPR011006 CheY-like superfamily DM55_RS10765 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS10765 IPR039420 Transcriptional regulatory protein WalR-like DM55_RS10775 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS10775 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS10775 IPR005467 Histidine kinase domain DM55_RS10775 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS10775 IPR000014 PAS domain DM55_RS10775 IPR000700 PAS-associated, C-terminal DM55_RS10775 IPR029151 Periplasmic sensor-like domain superfamily DM55_RS10775 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS10775 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS10775 IPR029150 Double Cache domain 3 DM55_RS10775 IPR035965 PAS domain superfamily DM55_RS10775 IPR003660 HAMP domain DM55_RS10785 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS10785 IPR005835 Nucleotidyl transferase domain DM55_RS10785 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type DM55_RS10790 IPR002303 Valine-tRNA ligase DM55_RS10790 IPR033705 Valyl tRNA synthetase, anticodon-binding domain DM55_RS10790 IPR002300 Aminoacyl-tRNA synthetase, class Ia DM55_RS10790 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS10790 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DM55_RS10790 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DM55_RS10790 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily DM55_RS10790 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm DM55_RS10790 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DM55_RS10790 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DM55_RS10790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10795 IPR013986 DExx box DNA helicase domain superfamily DM55_RS10795 IPR005753 DNA helicase, ATP-dependent, UvrD type DM55_RS10795 IPR014017 UvrD-like DNA helicase, C-terminal DM55_RS10795 IPR000212 DNA helicase, UvrD/REP type DM55_RS10795 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10795 IPR014016 UvrD-like helicase, ATP-binding domain DM55_RS10795 IPR034739 UvrD/AddA helicase, N-terminal DM55_RS10800 IPR035994 Nucleoside phosphorylase superfamily DM55_RS10800 IPR000845 Nucleoside phosphorylase domain DM55_RS10800 IPR010049 MTA/SAH nucleosidase DM55_RS10805 IPR036259 MFS transporter superfamily DM55_RS10805 IPR020846 Major facilitator superfamily domain DM55_RS10805 IPR011701 Major facilitator superfamily DM55_RS10810 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DM55_RS10810 IPR003660 HAMP domain DM55_RS10810 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DM55_RS10810 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS10810 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DM55_RS10810 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS10820 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DM55_RS10830 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein DM55_RS10835 IPR003423 Outer membrane efflux protein DM55_RS10835 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DM55_RS10840 IPR005119 LysR, substrate-binding DM55_RS10840 IPR000847 Transcription regulator HTH, LysR DM55_RS10840 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS10840 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS10855 IPR016166 FAD-binding domain, PCMH-type DM55_RS10855 IPR036318 FAD-binding, type PCMH-like superfamily DM55_RS10855 IPR016164 FAD-linked oxidase-like, C-terminal DM55_RS10855 IPR004490 Glycolate oxidase subunit GlcD DM55_RS10855 IPR004113 FAD-linked oxidase, C-terminal DM55_RS10855 IPR006094 FAD linked oxidase, N-terminal DM55_RS10855 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DM55_RS10865 IPR010089 Flavoprotein WrbA-like DM55_RS10865 IPR005025 NADPH-dependent FMN reductase-like DM55_RS10865 IPR008254 Flavodoxin/nitric oxide synthase DM55_RS10865 IPR001226 Flavodoxin, conserved site DM55_RS10865 IPR029039 Flavoprotein-like superfamily DM55_RS10870 IPR017039 Virulence factor BrkB DM55_RS10870 IPR023679 Uncharacterised protein family UPF0761, bacterial DM55_RS10885 IPR036259 MFS transporter superfamily DM55_RS10885 IPR011701 Major facilitator superfamily DM55_RS10885 IPR023727 Lysophospholipid transporter LplT DM55_RS10895 IPR020541 Chorismate synthase, conserved site DM55_RS10895 IPR035904 Chorismate synthase AroC superfamily DM55_RS10895 IPR000453 Chorismate synthase DM55_RS10910 IPR001584 Integrase, catalytic core DM55_RS10910 IPR036397 Ribonuclease H superfamily DM55_RS10910 IPR012337 Ribonuclease H-like superfamily DM55_RS10910 IPR038965 Transposase InsF-like DM55_RS10910 IPR025948 HTH-like domain DM55_RS10915 IPR025948 HTH-like domain DM55_RS10915 IPR012337 Ribonuclease H-like superfamily DM55_RS10915 IPR001584 Integrase, catalytic core DM55_RS10915 IPR036397 Ribonuclease H superfamily DM55_RS10920 IPR002514 Transposase IS3/IS911family DM55_RS10920 IPR009057 Homeobox-like domain superfamily DM55_RS10935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS10935 IPR013216 Methyltransferase type 11 DM55_RS10945 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily DM55_RS10945 IPR033129 Phosphoenolpyruvate carboxylase, His active site DM55_RS10945 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site DM55_RS10945 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type DM55_RS10945 IPR021135 Phosphoenolpyruvate carboxylase DM55_RS10955 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily DM55_RS10955 IPR022418 Porphobilinogen deaminase, C-terminal DM55_RS10955 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site DM55_RS10955 IPR000860 Porphobilinogen deaminase DM55_RS10955 IPR022417 Porphobilinogen deaminase, N-terminal DM55_RS10960 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily DM55_RS10960 IPR039793 Uroporphyrinogen-III synthase DM55_RS10960 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase DM55_RS10970 IPR011701 Major facilitator superfamily DM55_RS10970 IPR036259 MFS transporter superfamily DM55_RS10970 IPR020846 Major facilitator superfamily domain DM55_RS10975 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS10975 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS10975 IPR036291 NAD(P)-binding domain superfamily DM55_RS10980 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS10980 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS10980 IPR015590 Aldehyde dehydrogenase domain DM55_RS10980 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS10980 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS10985 IPR008162 Inorganic pyrophosphatase DM55_RS10985 IPR036649 Inorganic pyrophosphatase superfamily DM55_RS10990 IPR000305 GIY-YIG endonuclease DM55_RS10990 IPR035901 GIY-YIG endonuclease superfamily DM55_RS11005 IPR036526 Carbon-nitrogen hydrolase superfamily DM55_RS11005 IPR003010 Carbon-nitrogen hydrolase DM55_RS11005 IPR003694 NAD(+) synthetase DM55_RS11005 IPR022310 NAD/GMP synthase DM55_RS11005 IPR014445 Glutamine-dependent NAD(+) synthetase DM55_RS11005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS11010 IPR002187 Nitrogen regulatory protein PII DM55_RS11010 IPR011322 Nitrogen regulatory PII-like, alpha/beta DM55_RS11010 IPR017918 Nitrogen regulatory protein PII, conserved site DM55_RS11010 IPR002332 Nitrogen regulatory protein P-II, urydylation site DM55_RS11010 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DM55_RS11015 IPR033900 Porin domain, Gram-negative type DM55_RS11015 IPR023614 Porin domain superfamily DM55_RS11015 IPR002299 Porin, Neisseria sp. type DM55_RS11020 IPR003593 AAA+ ATPase domain DM55_RS11020 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11020 IPR003439 ABC transporter-like DM55_RS11020 IPR017871 ABC transporter, conserved site DM55_RS11020 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DM55_RS11025 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS11025 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DM55_RS11025 IPR035906 MetI-like superfamily DM55_RS11030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS11030 IPR035906 MetI-like superfamily DM55_RS11030 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DM55_RS11030 IPR030199 Histidine transport system permease protein HisQ DM55_RS11035 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DM55_RS11035 IPR018313 Solute-binding protein family 3, conserved site DM55_RS11035 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter DM55_RS11055 IPR039420 Transcriptional regulatory protein WalR-like DM55_RS11055 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS11055 IPR001789 Signal transduction response regulator, receiver domain DM55_RS11055 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS11055 IPR001867 OmpR/PhoB-type DNA-binding domain DM55_RS11055 IPR011006 CheY-like superfamily DM55_RS11060 IPR003660 HAMP domain DM55_RS11060 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS11060 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS11060 IPR005467 Histidine kinase domain DM55_RS11060 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS11060 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS11060 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS11070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS11070 IPR035906 MetI-like superfamily DM55_RS11075 IPR003593 AAA+ ATPase domain DM55_RS11075 IPR017871 ABC transporter, conserved site DM55_RS11075 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11075 IPR003439 ABC transporter-like DM55_RS11080 IPR025948 HTH-like domain DM55_RS11080 IPR001584 Integrase, catalytic core DM55_RS11080 IPR012337 Ribonuclease H-like superfamily DM55_RS11080 IPR036397 Ribonuclease H superfamily DM55_RS11085 IPR002514 Transposase IS3/IS911family DM55_RS11085 IPR009057 Homeobox-like domain superfamily DM55_RS11105 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS11105 IPR000847 Transcription regulator HTH, LysR DM55_RS11105 IPR005119 LysR, substrate-binding DM55_RS11105 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain DM55_RS11105 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS11110 IPR034184 Putative acyl-CoA dehydrogenase AidB DM55_RS11110 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS11110 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS11110 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS11110 IPR041504 Adaptive response protein AidB, N-terminal DM55_RS11110 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS11110 IPR006089 Acyl-CoA dehydrogenase, conserved site DM55_RS11115 IPR003673 CoA-transferase family III DM55_RS11115 IPR023606 CoA-transferase family III domain superfamily DM55_RS11120 IPR004736 MFS transporter, metabolite:H symporter DM55_RS11120 IPR036259 MFS transporter superfamily DM55_RS11120 IPR011701 Major facilitator superfamily DM55_RS11120 IPR005828 Major facilitator, sugar transporter-like DM55_RS11120 IPR020846 Major facilitator superfamily domain DM55_RS11120 IPR005829 Sugar transporter, conserved site DM55_RS11125 IPR036766 Fe(II) trafficking protein YggX superfamily DM55_RS11125 IPR007457 Fe(II) trafficking protein YggX DM55_RS11130 IPR000182 GNAT domain DM55_RS11130 IPR033719 N-acetylglutamate synthase, kinase-like domain DM55_RS11130 IPR010167 Amino-acid N-acetyltransferase DM55_RS11130 IPR036393 Acetylglutamate kinase-like superfamily DM55_RS11130 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS11130 IPR016181 Acyl-CoA N-acyltransferase DM55_RS11135 IPR011709 Domain of unknown function DUF1605 DM55_RS11135 IPR007502 Helicase-associated domain DM55_RS11135 IPR014001 Helicase superfamily 1/2, ATP-binding domain DM55_RS11135 IPR010222 RNA helicase HrpA DM55_RS11135 IPR011545 DEAD/DEAH box helicase domain DM55_RS11135 IPR024590 RNA helicase HrpA, C-terminal DM55_RS11135 IPR003593 AAA+ ATPase domain DM55_RS11135 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11135 IPR001650 Helicase, C-terminal DM55_RS11155 IPR036653 CinA-like, C-terminal DM55_RS11155 IPR036425 MoaB/Mog-like domain superfamily DM55_RS11155 IPR008135 Competence-induced protein CinA DM55_RS11155 IPR041424 CinA, KH domain DM55_RS11155 IPR008136 CinA, C-terminal DM55_RS11155 IPR001453 MoaB/Mog domain DM55_RS11165 IPR004809 Glutamine synthetase type I DM55_RS11165 IPR036651 Glutamine synthetase, N-terminal domain superfamily DM55_RS11165 IPR027302 Glutamine synthetase, N-terminal conserved site DM55_RS11165 IPR001637 Glutamine synthetase class-I, adenylation site DM55_RS11165 IPR027303 Glutamine synthetase, glycine-rich site DM55_RS11165 IPR008146 Glutamine synthetase, catalytic domain DM55_RS11165 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DM55_RS11165 IPR008147 Glutamine synthetase, beta-Grasp domain DM55_RS11170 IPR005467 Histidine kinase domain DM55_RS11170 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS11170 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS11170 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS11170 IPR000014 PAS domain DM55_RS11170 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS11170 IPR013767 PAS fold DM55_RS11170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS11170 IPR035965 PAS domain superfamily DM55_RS11175 IPR009057 Homeobox-like domain superfamily DM55_RS11175 IPR003593 AAA+ ATPase domain DM55_RS11175 IPR002197 DNA binding HTH domain, Fis-type DM55_RS11175 IPR001789 Signal transduction response regulator, receiver domain DM55_RS11175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11175 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DM55_RS11175 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS11175 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS11175 IPR010114 DNA-binding transcriptional regulator NtrC DM55_RS11175 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS11175 IPR011006 CheY-like superfamily DM55_RS11190 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS11190 IPR001789 Signal transduction response regulator, receiver domain DM55_RS11190 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS11190 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS11190 IPR011006 CheY-like superfamily DM55_RS11195 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DM55_RS11195 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS11200 IPR003816 Nitrate reductase, gamma subunit DM55_RS11200 IPR036197 NarG-like superfamily DM55_RS11200 IPR023234 NarG-like domain DM55_RS11205 IPR036411 TorD-like superfamily DM55_RS11205 IPR003765 Nitrate reductase chaperone, NarJ DM55_RS11205 IPR020945 DMSO/Nitrate reductase chaperone DM55_RS11210 IPR006547 Nitrate reductase, beta subunit DM55_RS11210 IPR038262 Nitrate reductase beta, C-terminal domain superfamily DM55_RS11210 IPR029263 Respiratory nitrate reductase beta, C-terminal DM55_RS11210 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS11215 IPR028189 Nitrate reductase, alpha subunit, N-terminal DM55_RS11215 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DM55_RS11215 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DM55_RS11215 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DM55_RS11215 IPR006656 Molybdopterin oxidoreductase DM55_RS11215 IPR006468 Nitrate reductase, alpha subunit DM55_RS11215 IPR037943 Nitrate reductase alpha subunit-like, MopB domain DM55_RS11215 IPR009010 Aspartate decarboxylase-like domain superfamily DM55_RS11215 IPR006657 Molybdopterin dinucleotide-binding domain DM55_RS11220 IPR036259 MFS transporter superfamily DM55_RS11220 IPR004737 Nitrate transporter DM55_RS11220 IPR011701 Major facilitator superfamily DM55_RS11225 IPR020846 Major facilitator superfamily domain DM55_RS11225 IPR011701 Major facilitator superfamily DM55_RS11225 IPR036259 MFS transporter superfamily DM55_RS11235 IPR022880 DNA polymerase IV DM55_RS11235 IPR017961 DNA polymerase, Y-family, little finger domain DM55_RS11235 IPR001126 UmuC domain DM55_RS11235 IPR036775 DNA polymerase, Y-family, little finger domain superfamily DM55_RS11240 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DM55_RS11240 IPR001567 Peptidase M3A/M3B catalytic domain DM55_RS11245 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DM55_RS11245 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site DM55_RS11245 IPR036291 NAD(P)-binding domain superfamily DM55_RS11245 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DM55_RS11245 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase DM55_RS11250 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS11250 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS11250 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS11250 IPR001789 Signal transduction response regulator, receiver domain DM55_RS11250 IPR011006 CheY-like superfamily DM55_RS11255 IPR035965 PAS domain superfamily DM55_RS11255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS11255 IPR013767 PAS fold DM55_RS11255 IPR000700 PAS-associated, C-terminal DM55_RS11255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS11255 IPR001610 PAC motif DM55_RS11255 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS11255 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS11255 IPR005467 Histidine kinase domain DM55_RS11255 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS11255 IPR000014 PAS domain DM55_RS11260 IPR005474 Transketolase, N-terminal DM55_RS11260 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II DM55_RS11260 IPR029061 Thiamin diphosphate-binding fold DM55_RS11260 IPR041621 Pyruvate dehydrogenase E1 component, middle domain DM55_RS11260 IPR004660 Pyruvate dehydrogenase E1 component DM55_RS11260 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal DM55_RS11265 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DM55_RS11265 IPR036625 E3-binding domain superfamily DM55_RS11265 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DM55_RS11265 IPR004167 Peripheral subunit-binding domain DM55_RS11265 IPR011053 Single hybrid motif DM55_RS11265 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex DM55_RS11265 IPR000089 Biotin/lipoyl attachment DM55_RS11265 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DM55_RS11270 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DM55_RS11270 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM55_RS11270 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DM55_RS11270 IPR006258 Dihydrolipoamide dehydrogenase DM55_RS11270 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DM55_RS11270 IPR023753 FAD/NAD(P)-binding domain DM55_RS11270 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS11280 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DM55_RS11280 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DM55_RS11280 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS11285 IPR018968 Phasin DM55_RS11300 IPR009057 Homeobox-like domain superfamily DM55_RS11300 IPR002514 Transposase IS3/IS911family DM55_RS11305 IPR025948 HTH-like domain DM55_RS11305 IPR001584 Integrase, catalytic core DM55_RS11305 IPR012337 Ribonuclease H-like superfamily DM55_RS11305 IPR036397 Ribonuclease H superfamily DM55_RS11320 IPR012340 Nucleic acid-binding, OB-fold DM55_RS11320 IPR022967 RNA-binding domain, S1 DM55_RS11320 IPR004368 Translation initiation factor IF-1 DM55_RS11320 IPR006196 RNA-binding domain, S1, IF1 type DM55_RS11340 IPR024922 Rubredoxin DM55_RS11340 IPR018527 Rubredoxin, iron-binding site DM55_RS11340 IPR024934 Rubredoxin-like domain DM55_RS11340 IPR024935 Rubredoxin domain DM55_RS11350 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily DM55_RS11350 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11350 IPR017871 ABC transporter, conserved site DM55_RS11350 IPR003593 AAA+ ATPase domain DM55_RS11350 IPR003439 ABC transporter-like DM55_RS11350 IPR032781 ABC-transporter extension domain DM55_RS11350 IPR032524 ABC transporter Uup, C-terminal DM55_RS11355 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DM55_RS11355 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal DM55_RS11355 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DM55_RS11355 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS11355 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS11355 IPR002288 DNA gyrase B subunit, C-terminal DM55_RS11355 IPR001241 DNA topoisomerase, type IIA DM55_RS11355 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS11355 IPR018522 DNA topoisomerase, type IIA, conserved site DM55_RS11355 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative DM55_RS11355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS11355 IPR006171 TOPRIM domain DM55_RS11360 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DM55_RS11360 IPR013760 DNA topoisomerase, type IIA-like domain superfamily DM55_RS11360 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DM55_RS11360 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative DM55_RS11360 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DM55_RS11360 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily DM55_RS11375 IPR000847 Transcription regulator HTH, LysR DM55_RS11375 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS11375 IPR005119 LysR, substrate-binding DM55_RS11375 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS11385 IPR005119 LysR, substrate-binding DM55_RS11385 IPR000847 Transcription regulator HTH, LysR DM55_RS11385 IPR037403 HTH-type transcriptional regulator CynR, PBP2 domain DM55_RS11385 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS11385 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS11390 IPR004736 MFS transporter, metabolite:H symporter DM55_RS11390 IPR036259 MFS transporter superfamily DM55_RS11390 IPR011701 Major facilitator superfamily DM55_RS11390 IPR020846 Major facilitator superfamily domain DM55_RS11390 IPR005828 Major facilitator, sugar transporter-like DM55_RS11390 IPR005829 Sugar transporter, conserved site DM55_RS11395 IPR002933 Peptidase M20 DM55_RS11395 IPR011650 Peptidase M20, dimerisation domain DM55_RS11395 IPR010158 Amidase, carbamoylase-type DM55_RS11395 IPR036264 Bacterial exopeptidase dimerisation domain DM55_RS11400 IPR000286 Histone deacetylase family DM55_RS11400 IPR023801 Histone deacetylase domain DM55_RS11400 IPR037138 Histone deacetylase domain superfamily DM55_RS11400 IPR023696 Ureohydrolase domain superfamily DM55_RS11410 IPR001633 EAL domain DM55_RS11410 IPR005330 MHYT domain DM55_RS11410 IPR029787 Nucleotide cyclase DM55_RS11410 IPR000160 GGDEF domain DM55_RS11410 IPR035919 EAL domain superfamily DM55_RS11415 IPR003719 Phenazine biosynthesis PhzF protein DM55_RS11425 IPR036397 Ribonuclease H superfamily DM55_RS11425 IPR012337 Ribonuclease H-like superfamily DM55_RS11425 IPR001584 Integrase, catalytic core DM55_RS11425 IPR025948 HTH-like domain DM55_RS11435 IPR005886 UDP-glucose 4-epimerase DM55_RS11435 IPR036291 NAD(P)-binding domain superfamily DM55_RS11435 IPR016040 NAD(P)-binding domain DM55_RS11440 IPR001296 Glycosyl transferase, family 1 DM55_RS11440 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DM55_RS11455 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DM55_RS11455 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DM55_RS11455 IPR016066 Alpha-D-phosphohexomutase, conserved site DM55_RS11455 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DM55_RS11455 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DM55_RS11455 IPR005843 Alpha-D-phosphohexomutase, C-terminal DM55_RS11455 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DM55_RS11455 IPR005841 Alpha-D-phosphohexomutase superfamily DM55_RS11460 IPR011908 Lipopolysaccharide heptosyltransferase I DM55_RS11460 IPR002201 Glycosyl transferase, family 9 DM55_RS11470 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal DM55_RS11470 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily DM55_RS11470 IPR039901 3-deoxy-D-manno-octulosonic acid transferase DM55_RS11470 IPR001296 Glycosyl transferase, family 1 DM55_RS11475 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DM55_RS11475 IPR004400 Urease accessory protein UreG DM55_RS11475 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11480 IPR038277 UreF domain superfamily DM55_RS11480 IPR002639 Urease accessory protein UreF DM55_RS11485 IPR012406 Urease accessory protein UreE DM55_RS11485 IPR007864 Urease accessory protein UreE, C-terminal domain DM55_RS11485 IPR036118 UreE urease accessory, N-terminal domain superfamily DM55_RS11485 IPR036675 UreE, C-terminal domain superfamily DM55_RS11485 IPR004029 UreE urease accessory, N-terminal DM55_RS11490 IPR011059 Metal-dependent hydrolase, composite domain superfamily DM55_RS11490 IPR006680 Amidohydrolase-related DM55_RS11490 IPR029754 Urease nickel binding site DM55_RS11490 IPR017951 Urease alpha subunit, C-terminal DM55_RS11490 IPR005848 Urease, alpha subunit DM55_RS11490 IPR032466 Metal-dependent hydrolase DM55_RS11490 IPR011612 Urease alpha-subunit, N-terminal domain DM55_RS11490 IPR017950 Urease active site DM55_RS11495 IPR002019 Urease, beta subunit DM55_RS11495 IPR036461 Urease, beta subunit superfamily DM55_RS11500 IPR036463 Urease, gamma subunit superfamily DM55_RS11500 IPR002026 Urease, gamma/gamma-beta subunit DM55_RS11500 IPR012010 Urease, gamma subunit DM55_RS11505 IPR002669 Urease accessory protein UreD DM55_RS11510 IPR017871 ABC transporter, conserved site DM55_RS11510 IPR003593 AAA+ ATPase domain DM55_RS11510 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein DM55_RS11510 IPR003439 ABC transporter-like DM55_RS11510 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11515 IPR003439 ABC transporter-like DM55_RS11515 IPR017871 ABC transporter, conserved site DM55_RS11515 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG DM55_RS11515 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11515 IPR003593 AAA+ ATPase domain DM55_RS11520 IPR001851 ABC transporter, permease DM55_RS11525 IPR001851 ABC transporter, permease DM55_RS11530 IPR039570 AmiC, periplasmic binding domain DM55_RS11530 IPR000709 Leu/Ile/Val-binding protein DM55_RS11530 IPR028082 Periplasmic binding protein-like I DM55_RS11535 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS11535 IPR005814 Aminotransferase class-III DM55_RS11535 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS11535 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS11540 IPR036873 Rhodanese-like domain superfamily DM55_RS11540 IPR023695 Thiosulfate sulfurtransferase, bacterial DM55_RS11540 IPR001763 Rhodanese-like domain DM55_RS11545 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase DM55_RS11545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS11555 IPR034505 Anaerobic coproporphyrinogen-III oxidase DM55_RS11555 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN DM55_RS11555 IPR006638 Elp3/MiaB/NifB DM55_RS11555 IPR010723 HemN, C-terminal DM55_RS11555 IPR007197 Radical SAM DM55_RS11555 IPR023404 Radical SAM, alpha/beta horseshoe DM55_RS11560 IPR005358 Putative zinc- or iron-chelating domain containing protein DM55_RS11570 IPR003824 Undecaprenyl-diphosphatase UppP DM55_RS11575 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type DM55_RS11575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS11590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS11590 IPR013216 Methyltransferase type 11 DM55_RS11595 IPR023828 Peptidase S8, subtilisin, Ser-active site DM55_RS11595 IPR000209 Peptidase S8/S53 domain DM55_RS11595 IPR015366 Peptidase S53, activation domain DM55_RS11595 IPR030400 Sedolisin domain DM55_RS11595 IPR036852 Peptidase S8/S53 domain superfamily DM55_RS11600 IPR003691 Putative fluoride ion transporter CrcB DM55_RS11610 IPR003425 CCB3/YggT DM55_RS11625 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DM55_RS11625 IPR001926 Pyridoxal-phosphate dependent enzyme DM55_RS11625 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS11635 IPR002830 UbiD decarboxylyase family DM55_RS11635 IPR023677 UbiD decarboxylyase, bacteria DM55_RS11640 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A DM55_RS11640 IPR023346 Lysozyme-like domain superfamily DM55_RS11640 IPR000189 Prokaryotic transglycosylase, active site DM55_RS11640 IPR008258 Transglycosylase SLT domain 1 DM55_RS11645 IPR004839 Aminotransferase, class I/classII DM55_RS11645 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DM55_RS11645 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS11645 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS11650 IPR006027 NusB/RsmB/TIM44 DM55_RS11650 IPR035926 NusB-like superfamily DM55_RS11650 IPR011605 NusB antitermination factor DM55_RS11655 IPR036467 Lumazine/riboflavin synthase superfamily DM55_RS11655 IPR034964 Lumazine synthase DM55_RS11655 IPR002180 Lumazine/riboflavin synthase DM55_RS11660 IPR036144 RibA-like superfamily DM55_RS11660 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DM55_RS11660 IPR032677 GTP cyclohydrolase II DM55_RS11660 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB DM55_RS11665 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS11665 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily DM55_RS11665 IPR001783 Lumazine-binding protein DM55_RS11665 IPR026017 Lumazine-binding domain DM55_RS11670 IPR016192 APOBEC/CMP deaminase, zinc-binding DM55_RS11670 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal DM55_RS11670 IPR016193 Cytidine deaminase-like DM55_RS11670 IPR024072 Dihydrofolate reductase-like domain superfamily DM55_RS11670 IPR004794 Riboflavin biosynthesis protein RibD DM55_RS11670 IPR011549 Riboflavin-specific deaminase, C-terminal DM55_RS11670 IPR002125 Cytidine and deoxycytidylate deaminase domain DM55_RS11675 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS11675 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS11675 IPR005814 Aminotransferase class-III DM55_RS11675 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase DM55_RS11675 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS11690 IPR020846 Major facilitator superfamily domain DM55_RS11690 IPR036259 MFS transporter superfamily DM55_RS11690 IPR011701 Major facilitator superfamily DM55_RS11690 IPR004812 Drug resistance transporter Bcr/CmlA subfamily DM55_RS11690 IPR004734 Multidrug resistance protein DM55_RS11700 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS11700 IPR001926 Pyridoxal-phosphate dependent enzyme DM55_RS11700 IPR023702 D-cysteine desulphhydrase, bacterial DM55_RS11700 IPR005966 D-cysteine desulfhydrase DM55_RS11700 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase DM55_RS11705 IPR003439 ABC transporter-like DM55_RS11705 IPR017871 ABC transporter, conserved site DM55_RS11705 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11705 IPR003593 AAA+ ATPase domain DM55_RS11705 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type DM55_RS11710 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DM55_RS11710 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS11710 IPR035906 MetI-like superfamily DM55_RS11715 IPR018313 Solute-binding protein family 3, conserved site DM55_RS11715 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DM55_RS11720 IPR003836 Glucokinase DM55_RS11720 IPR009057 Homeobox-like domain superfamily DM55_RS11720 IPR000281 Helix-turn-helix protein RpiR DM55_RS11720 IPR035472 RpiR-like, SIS domain DM55_RS11720 IPR001347 Sugar isomerase (SIS) DM55_RS11720 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS11725 IPR005900 6-phosphogluconolactonase, DevB-type DM55_RS11725 IPR039104 6-Phosphogluconolactonase DM55_RS11725 IPR037171 NagB/RpiA transferase-like DM55_RS11725 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase DM55_RS11730 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding DM55_RS11730 IPR001282 Glucose-6-phosphate dehydrogenase DM55_RS11730 IPR019796 Glucose-6-phosphate dehydrogenase, active site DM55_RS11730 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal DM55_RS11730 IPR036291 NAD(P)-binding domain superfamily DM55_RS11735 IPR006059 Bacterial extracellular solute-binding protein DM55_RS11740 IPR035906 MetI-like superfamily DM55_RS11740 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS11745 IPR035906 MetI-like superfamily DM55_RS11745 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS11750 IPR040582 MalK, OB fold domain DM55_RS11750 IPR002195 Dihydroorotase, conserved site DM55_RS11750 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11750 IPR017871 ABC transporter, conserved site DM55_RS11750 IPR003439 ABC transporter-like DM55_RS11750 IPR003593 AAA+ ATPase domain DM55_RS11750 IPR017922 sn-Glycerol-3-phosphate import ATP-binding protein UgpC DM55_RS11750 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS11755 IPR005115 Uncharacterised domain UPF0126 DM55_RS11760 IPR007696 DNA mismatch repair protein MutS, core DM55_RS11760 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DM55_RS11760 IPR005747 Endonuclease MutS2 DM55_RS11760 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11760 IPR000432 DNA mismatch repair protein MutS, C-terminal DM55_RS11760 IPR036063 Smr domain superfamily DM55_RS11760 IPR002625 Smr domain DM55_RS11765 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS11765 IPR023753 FAD/NAD(P)-binding domain DM55_RS11765 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DM55_RS11765 IPR005982 Thioredoxin reductase DM55_RS11770 IPR002543 FtsK domain DM55_RS11770 IPR025199 DNA translocase FtsK, 4TM region DM55_RS11770 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS11770 IPR018541 FtsK gamma domain DM55_RS11770 IPR041027 FtsK alpha domain DM55_RS11770 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11770 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS11775 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria DM55_RS11775 IPR029046 Lipoprotein localisation LolA/LolB/LppX DM55_RS11775 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DM55_RS11785 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11785 IPR021886 MgsA AAA+ ATPase C-terminal DM55_RS11785 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DM55_RS11785 IPR003593 AAA+ ATPase domain DM55_RS11785 IPR032423 AAA C-terminal domain DM55_RS11785 IPR003959 ATPase, AAA-type, core DM55_RS11795 IPR002317 Serine-tRNA ligase, type1 DM55_RS11795 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DM55_RS11795 IPR006195 Aminoacyl-tRNA synthetase, class II DM55_RS11795 IPR015866 Serine-tRNA synthetase, type1, N-terminal DM55_RS11795 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DM55_RS11795 IPR033729 Serine-tRNA ligase catalytic core domain DM55_RS11795 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily DM55_RS11815 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily DM55_RS11815 IPR007874 Septum formation inhibitor MinC, N-terminal DM55_RS11815 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily DM55_RS11815 IPR013033 Septum formation inhibitor MinC DM55_RS11815 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal DM55_RS11815 IPR005526 Septum formation inhibitor MinC, C-terminal DM55_RS11820 IPR025501 ATP binding protein MinD DM55_RS11820 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11820 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DM55_RS11820 IPR010223 ATP binding protein MinD, bacterial-type DM55_RS11825 IPR036707 Cell division topological specificity factor MinE superfamily DM55_RS11825 IPR005527 Cell division topological specificity factor MinE DM55_RS11840 IPR001807 Chloride channel, voltage gated DM55_RS11840 IPR014743 Chloride channel, core DM55_RS11840 IPR023861 Chloride channel, ClcA DM55_RS11845 IPR002201 Glycosyl transferase, family 9 DM55_RS11845 IPR011908 Lipopolysaccharide heptosyltransferase I DM55_RS11855 IPR005829 Sugar transporter, conserved site DM55_RS11855 IPR004736 MFS transporter, metabolite:H symporter DM55_RS11855 IPR036259 MFS transporter superfamily DM55_RS11855 IPR020846 Major facilitator superfamily domain DM55_RS11855 IPR011701 Major facilitator superfamily DM55_RS11855 IPR005828 Major facilitator, sugar transporter-like DM55_RS11885 IPR004559 Heme chaperone HemW-like DM55_RS11885 IPR034505 Anaerobic coproporphyrinogen-III oxidase DM55_RS11885 IPR006638 Elp3/MiaB/NifB DM55_RS11885 IPR007197 Radical SAM DM55_RS11885 IPR023404 Radical SAM, alpha/beta horseshoe DM55_RS11885 IPR010723 HemN, C-terminal DM55_RS11890 IPR002637 Ham1-like protein DM55_RS11890 IPR020922 dITP/XTP pyrophosphatase DM55_RS11890 IPR029001 Inosine triphosphate pyrophosphatase-like DM55_RS11895 IPR002381 Ribonuclease PH, bacterial-type DM55_RS11895 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS11895 IPR027408 PNPase/RNase PH domain superfamily DM55_RS11895 IPR001247 Exoribonuclease, phosphorolytic domain 1 DM55_RS11895 IPR018336 Ribonuclease PH, conserved site DM55_RS11895 IPR036345 Exoribonuclease, PH domain 2 superfamily DM55_RS11895 IPR015847 Exoribonuclease, phosphorolytic domain 2 DM55_RS11900 IPR005229 Conserved hypothetical protein CHP00255 DM55_RS11900 IPR013527 YicC-like, N-terminal DM55_RS11900 IPR013551 Domain of unknown function DUF1732 DM55_RS11905 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DM55_RS11905 IPR017665 Guanylate kinase DM55_RS11905 IPR008144 Guanylate kinase-like domain DM55_RS11905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11905 IPR020590 Guanylate kinase, conserved site DM55_RS11910 IPR036161 RPB6/omega subunit-like superfamily DM55_RS11910 IPR012293 RNA polymerase subunit, RPB6/omega DM55_RS11910 IPR006110 RNA polymerase, subunit omega/K/RPB6 DM55_RS11910 IPR003716 DNA-directed RNA polymerase, omega subunit DM55_RS11915 IPR033655 RelA, TGS domain DM55_RS11915 IPR012675 Beta-grasp domain superfamily DM55_RS11915 IPR004095 TGS DM55_RS11915 IPR007685 RelA/SpoT DM55_RS11915 IPR004811 RelA/SpoT family DM55_RS11915 IPR003607 HD/PDEase domain DM55_RS11915 IPR002912 ACT domain DM55_RS11915 IPR012676 TGS-like DM55_RS11930 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal DM55_RS11930 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily DM55_RS11930 IPR006358 Transcription elongation factor GreB DM55_RS11930 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily DM55_RS11930 IPR018151 Transcription elongation factor, GreA/GreB, conserved site DM55_RS11930 IPR023459 Transcription elongation factor GreA/GreB family DM55_RS11930 IPR028624 Transcription elongation factor GreA/GreB DM55_RS11930 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DM55_RS11945 IPR025948 HTH-like domain DM55_RS11945 IPR001584 Integrase, catalytic core DM55_RS11945 IPR012337 Ribonuclease H-like superfamily DM55_RS11945 IPR036397 Ribonuclease H superfamily DM55_RS11950 IPR009057 Homeobox-like domain superfamily DM55_RS11950 IPR002514 Transposase IS3/IS911family DM55_RS11965 IPR006665 OmpA-like domain DM55_RS11965 IPR006664 Outer membrane protein, bacterial DM55_RS11965 IPR006690 Outer membrane protein, OmpA-like, conserved site DM55_RS11965 IPR036737 OmpA-like domain superfamily DM55_RS11965 IPR039001 Peptidoglycan-associated lipoprotein DM55_RS11965 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal DM55_RS11970 IPR011042 Six-bladed beta-propeller, TolB-like DM55_RS11970 IPR011659 WD40-like Beta Propeller DM55_RS11970 IPR014167 Tol-Pal system protein TolB DM55_RS11970 IPR007195 TolB, N-terminal DM55_RS11970 IPR036752 TolB, N-terminal domain superfamily DM55_RS11980 IPR003400 Biopolymer transport protein ExbD/TolR DM55_RS11980 IPR014168 Tol-Pal system protein TolR DM55_RS11985 IPR002898 MotA/TolQ/ExbB proton channel DM55_RS11985 IPR014163 Tol-Pal system, TolQ DM55_RS11990 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family DM55_RS11990 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase DM55_RS11990 IPR006683 Thioesterase domain DM55_RS11990 IPR029069 HotDog domain superfamily DM55_RS11990 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site DM55_RS11995 IPR036291 NAD(P)-binding domain superfamily DM55_RS11995 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS11995 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS12000 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS12000 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site DM55_RS12000 IPR039429 Serine hydroxymethyltransferase-like domain DM55_RS12000 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS12000 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS12000 IPR001085 Serine hydroxymethyltransferase DM55_RS12005 IPR005144 ATP-cone domain DM55_RS12005 IPR003796 Ribonucleotide reductase regulator NrdR-like DM55_RS12050 IPR036249 Thioredoxin-like superfamily DM55_RS12050 IPR013766 Thioredoxin domain DM55_RS12050 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DM55_RS12050 IPR024706 Peroxiredoxin, AhpC-type DM55_RS12050 IPR019479 Peroxiredoxin, C-terminal DM55_RS12050 IPR022915 Peroxiredoxin, TDXH subfamily DM55_RS12060 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS12060 IPR006089 Acyl-CoA dehydrogenase, conserved site DM55_RS12060 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS12060 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS12060 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS12060 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DM55_RS12060 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS12085 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS12085 IPR002938 FAD-binding domain DM55_RS12085 IPR023786 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase DM55_RS12095 IPR005829 Sugar transporter, conserved site DM55_RS12095 IPR036259 MFS transporter superfamily DM55_RS12095 IPR020846 Major facilitator superfamily domain DM55_RS12095 IPR011701 Major facilitator superfamily DM55_RS12095 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family DM55_RS12100 IPR022950 Homogentisate 1,2-dioxygenase, bacterial DM55_RS12100 IPR014710 RmlC-like jelly roll fold DM55_RS12100 IPR011051 RmlC-like cupin domain superfamily DM55_RS12100 IPR005708 Homogentisate 1,2-dioxygenase DM55_RS12115 IPR020846 Major facilitator superfamily domain DM55_RS12115 IPR011701 Major facilitator superfamily DM55_RS12115 IPR036259 MFS transporter superfamily DM55_RS12120 IPR012825 5,6-dimethylbenzimidazole synthase BluB DM55_RS12120 IPR000415 Nitroreductase-like DM55_RS12120 IPR029479 Nitroreductase DM55_RS12125 IPR036291 NAD(P)-binding domain superfamily DM55_RS12125 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DM55_RS12125 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DM55_RS12125 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DM55_RS12125 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM55_RS12130 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS12130 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS12130 IPR000847 Transcription regulator HTH, LysR DM55_RS12130 IPR005119 LysR, substrate-binding DM55_RS12135 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase DM55_RS12135 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS12135 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS12135 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DM55_RS12135 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS12135 IPR000192 Aminotransferase class V domain DM55_RS12145 IPR000620 EamA domain DM55_RS12150 IPR011701 Major facilitator superfamily DM55_RS12150 IPR020846 Major facilitator superfamily domain DM55_RS12150 IPR036259 MFS transporter superfamily DM55_RS12150 IPR023008 Uncharacterized MFS-type transporter YhhS-like DM55_RS12155 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DM55_RS12155 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DM55_RS12155 IPR012675 Beta-grasp domain superfamily DM55_RS12155 IPR036010 2Fe-2S ferredoxin-like superfamily DM55_RS12155 IPR036884 [2Fe-2S]-binding domain superfamily DM55_RS12155 IPR002888 [2Fe-2S]-binding DM55_RS12160 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DM55_RS12160 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily DM55_RS12160 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding DM55_RS12160 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily DM55_RS12175 IPR012910 TonB-dependent receptor, plug domain DM55_RS12175 IPR037066 TonB-dependent receptor, plug domain superfamily DM55_RS12175 IPR039423 TonB-dependent receptor-like DM55_RS12175 IPR010917 TonB-dependent receptor, conserved site DM55_RS12175 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DM55_RS12175 IPR010105 TonB-dependent siderophore receptor DM55_RS12175 IPR000531 TonB-dependent receptor-like, beta-barrel DM55_RS12180 IPR017871 ABC transporter, conserved site DM55_RS12180 IPR003593 AAA+ ATPase domain DM55_RS12180 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12180 IPR003439 ABC transporter-like DM55_RS12195 IPR037294 ABC transporter, BtuC-like DM55_RS12195 IPR000522 ABC transporter, permease protein, BtuC-like DM55_RS12200 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS12200 IPR005119 LysR, substrate-binding DM55_RS12200 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS12200 IPR000847 Transcription regulator HTH, LysR DM55_RS12200 IPR037416 Nodulation protein D, PBP2 DM55_RS12220 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative DM55_RS12220 IPR029058 Alpha/Beta hydrolase fold DM55_RS12230 IPR002781 Transmembrane protein TauE-like DM55_RS12235 IPR011701 Major facilitator superfamily DM55_RS12235 IPR020846 Major facilitator superfamily domain DM55_RS12235 IPR036259 MFS transporter superfamily DM55_RS12235 IPR005829 Sugar transporter, conserved site DM55_RS12240 IPR030395 Glycerophosphodiester phosphodiesterase domain DM55_RS12240 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily DM55_RS12250 IPR004778 Homoserine/Threonine efflux protein DM55_RS12250 IPR001123 Amino acid exporter protein, LeuE-type DM55_RS12300 IPR013154 Alcohol dehydrogenase, N-terminal DM55_RS12300 IPR011032 GroES-like superfamily DM55_RS12300 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS12300 IPR020843 Polyketide synthase, enoylreductase domain DM55_RS12300 IPR036291 NAD(P)-binding domain superfamily DM55_RS12305 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS12305 IPR002577 Helix-turn-helix, HxlR type DM55_RS12305 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS12315 IPR011032 GroES-like superfamily DM55_RS12315 IPR037124 GroES chaperonin superfamily DM55_RS12315 IPR018369 Chaperonin GroES, conserved site DM55_RS12315 IPR020818 GroES chaperonin family DM55_RS12320 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DM55_RS12320 IPR027413 GroEL-like equatorial domain superfamily DM55_RS12320 IPR027409 GroEL-like apical domain superfamily DM55_RS12320 IPR018370 Chaperonin Cpn60, conserved site DM55_RS12320 IPR002423 Chaperonin Cpn60/TCP-1 family DM55_RS12320 IPR001844 Chaperonin Cpn60 DM55_RS12330 IPR024935 Rubredoxin domain DM55_RS12330 IPR024922 Rubredoxin DM55_RS12330 IPR024934 Rubredoxin-like domain DM55_RS12330 IPR018527 Rubredoxin, iron-binding site DM55_RS12340 IPR003774 Protein of unknown function UPF0301 DM55_RS12345 IPR006641 YqgF/RNase H-like domain DM55_RS12345 IPR037027 YqgF/RNase H-like domain superfamily DM55_RS12345 IPR005227 Putative pre-16S rRNA nuclease DM55_RS12345 IPR012337 Ribonuclease H-like superfamily DM55_RS12350 IPR023050 Bifunctional protein PyrR DM55_RS12350 IPR029057 Phosphoribosyltransferase-like DM55_RS12350 IPR000836 Phosphoribosyltransferase domain DM55_RS12355 IPR002082 Aspartate carbamoyltransferase DM55_RS12355 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DM55_RS12355 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DM55_RS12355 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DM55_RS12355 IPR006130 Aspartate/ornithine carbamoyltransferase DM55_RS12360 IPR006680 Amidohydrolase-related DM55_RS12360 IPR032466 Metal-dependent hydrolase DM55_RS12360 IPR011059 Metal-dependent hydrolase, composite domain superfamily DM55_RS12360 IPR004722 Dihydroorotase DM55_RS12370 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DM55_RS12370 IPR029052 Metallo-dependent phosphatase-like DM55_RS12370 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) DM55_RS12375 IPR016040 NAD(P)-binding domain DM55_RS12375 IPR005888 dTDP-glucose 4,6-dehydratase DM55_RS12375 IPR036291 NAD(P)-binding domain superfamily DM55_RS12380 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS12380 IPR005835 Nucleotidyl transferase domain DM55_RS12380 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form DM55_RS12385 IPR014710 RmlC-like jelly roll fold DM55_RS12385 IPR011051 RmlC-like cupin domain superfamily DM55_RS12385 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related DM55_RS12390 IPR029903 RmlD-like substrate binding domain DM55_RS12390 IPR005913 dTDP-4-dehydrorhamnose reductase family DM55_RS12390 IPR036291 NAD(P)-binding domain superfamily DM55_RS12400 IPR003439 ABC transporter-like DM55_RS12400 IPR003593 AAA+ ATPase domain DM55_RS12400 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12400 IPR017871 ABC transporter, conserved site DM55_RS12410 IPR036291 NAD(P)-binding domain superfamily DM55_RS12410 IPR001509 NAD-dependent epimerase/dehydratase DM55_RS12425 IPR001173 Glycosyltransferase 2-like DM55_RS12425 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS12435 IPR036291 NAD(P)-binding domain superfamily DM55_RS12435 IPR001509 NAD-dependent epimerase/dehydratase DM55_RS12440 IPR000715 Glycosyl transferase, family 4 DM55_RS12440 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site DM55_RS12445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS12445 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DM55_RS12445 IPR036291 NAD(P)-binding domain superfamily DM55_RS12450 IPR036397 Ribonuclease H superfamily DM55_RS12450 IPR001584 Integrase, catalytic core DM55_RS12450 IPR025948 HTH-like domain DM55_RS12450 IPR012337 Ribonuclease H-like superfamily DM55_RS12460 IPR001851 ABC transporter, permease DM55_RS12465 IPR001851 ABC transporter, permease DM55_RS12465 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal DM55_RS12470 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DM55_RS12470 IPR017871 ABC transporter, conserved site DM55_RS12470 IPR003439 ABC transporter-like DM55_RS12470 IPR003593 AAA+ ATPase domain DM55_RS12470 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12475 IPR003439 ABC transporter-like DM55_RS12475 IPR017871 ABC transporter, conserved site DM55_RS12475 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein DM55_RS12475 IPR003593 AAA+ ATPase domain DM55_RS12475 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12485 IPR016181 Acyl-CoA N-acyltransferase DM55_RS12485 IPR000182 GNAT domain DM55_RS12485 IPR023072 Acetyltransferase, YpeA DM55_RS12490 IPR004636 Acetylornithine/Succinylornithine transaminase family DM55_RS12490 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS12490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS12490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS12490 IPR005814 Aminotransferase class-III DM55_RS12495 IPR012675 Beta-grasp domain superfamily DM55_RS12495 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain DM55_RS12495 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DM55_RS12495 IPR017927 FAD-binding domain, ferredoxin reductase-type DM55_RS12495 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DM55_RS12495 IPR036010 2Fe-2S ferredoxin-like superfamily DM55_RS12495 IPR001433 Oxidoreductase FAD/NAD(P)-binding DM55_RS12495 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DM55_RS12495 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS12510 IPR036986 RNA-binding S4 domain superfamily DM55_RS12510 IPR002942 RNA-binding S4 domain DM55_RS12510 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DM55_RS12510 IPR006145 Pseudouridine synthase, RsuA/RluA DM55_RS12510 IPR020103 Pseudouridine synthase, catalytic domain superfamily DM55_RS12510 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain DM55_RS12510 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DM55_RS12520 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS12520 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS12520 IPR000847 Transcription regulator HTH, LysR DM55_RS12520 IPR005119 LysR, substrate-binding DM55_RS12525 IPR037410 HTH-type transcriptional regulator BudR, PBP2 domain DM55_RS12525 IPR005119 LysR, substrate-binding DM55_RS12525 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS12525 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS12525 IPR000847 Transcription regulator HTH, LysR DM55_RS12530 IPR000639 Epoxide hydrolase-like DM55_RS12530 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS12530 IPR029058 Alpha/Beta hydrolase fold DM55_RS12535 IPR005302 Molybdenum cofactor sulfurase, C-terminal DM55_RS12535 IPR005163 3-alpha domain DM55_RS12535 IPR011037 Pyruvate kinase-like, insert domain superfamily DM55_RS12540 IPR013785 Aldolase-type TIM barrel DM55_RS12540 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA DM55_RS12540 IPR002220 DapA-like DM55_RS12540 IPR020625 Schiff base-forming aldolase, active site DM55_RS12540 IPR020624 Schiff base-forming aldolase, conserved site DM55_RS12545 IPR001303 Class II aldolase/adducin N-terminal DM55_RS12545 IPR004782 L-fucose phosphate aldolase DM55_RS12545 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DM55_RS12550 IPR001387 Cro/C1-type helix-turn-helix domain DM55_RS12550 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain DM55_RS12550 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily DM55_RS12550 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DM55_RS12560 IPR036397 Ribonuclease H superfamily DM55_RS12560 IPR001584 Integrase, catalytic core DM55_RS12560 IPR025948 HTH-like domain DM55_RS12560 IPR012337 Ribonuclease H-like superfamily DM55_RS12565 IPR002514 Transposase IS3/IS911family DM55_RS12565 IPR009057 Homeobox-like domain superfamily DM55_RS12570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS12570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS12570 IPR004839 Aminotransferase, class I/classII DM55_RS12570 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS12575 IPR000620 EamA domain DM55_RS12585 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS12585 IPR004839 Aminotransferase, class I/classII DM55_RS12585 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS12585 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS12590 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS12590 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS12590 IPR001404 Heat shock protein Hsp90 family DM55_RS12590 IPR037196 HSP90, C-terminal domain DM55_RS12590 IPR019805 Heat shock protein Hsp90, conserved site DM55_RS12590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS12590 IPR020575 Heat shock protein Hsp90, N-terminal DM55_RS12595 IPR007440 Chorismate--pyruvate lyase DM55_RS12595 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DM55_RS12605 IPR025714 Methyltransferase domain DM55_RS12605 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DM55_RS12605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS12615 IPR001734 Sodium/solute symporter DM55_RS12615 IPR038377 Sodium/glucose symporter superfamily DM55_RS12620 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DM55_RS12620 IPR028973 PhnB-like DM55_RS12625 IPR013785 Aldolase-type TIM barrel DM55_RS12625 IPR018225 Transaldolase, active site DM55_RS12625 IPR004730 Transaldolase type 1 DM55_RS12625 IPR001585 Transaldolase/Fructose-6-phosphate aldolase DM55_RS12630 IPR004711 Benzoate transporter DM55_RS12640 IPR003593 AAA+ ATPase domain DM55_RS12640 IPR001270 ClpA/B family DM55_RS12640 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA DM55_RS12640 IPR004176 Clp, N-terminal DM55_RS12640 IPR019489 Clp ATPase, C-terminal DM55_RS12640 IPR028299 ClpA/B, conserved site 2 DM55_RS12640 IPR003959 ATPase, AAA-type, core DM55_RS12640 IPR041546 ClpA/ClpB, AAA lid domain DM55_RS12640 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12640 IPR036628 Clp, N-terminal domain superfamily DM55_RS12640 IPR018368 ClpA/B, conserved site 1 DM55_RS12645 IPR009056 Cytochrome c-like domain DM55_RS12645 IPR036909 Cytochrome c-like domain superfamily DM55_RS12645 IPR024167 Cytochrome c4-like DM55_RS12650 IPR009056 Cytochrome c-like domain DM55_RS12650 IPR036909 Cytochrome c-like domain superfamily DM55_RS12650 IPR024167 Cytochrome c4-like DM55_RS12655 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS12655 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS12655 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS12665 IPR000620 EamA domain DM55_RS12670 IPR005759 Endonuclease III DM55_RS12670 IPR004035 Endonuclease III, iron-sulphur binding site DM55_RS12670 IPR011257 DNA glycosylase DM55_RS12670 IPR000445 Helix-hairpin-helix motif DM55_RS12670 IPR004036 Endonuclease III-like, conserved site-2 DM55_RS12670 IPR003265 HhH-GPD domain DM55_RS12670 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif DM55_RS12670 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DM55_RS12675 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria DM55_RS12675 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB DM55_RS12675 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS12675 IPR007202 4Fe-4S domain DM55_RS12675 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS12680 IPR041474 HTH-type transcriptional repressor NicS, C-terminal DM55_RS12680 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS12680 IPR009057 Homeobox-like domain superfamily DM55_RS12680 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DM55_RS12690 IPR011613 GH15-like domain DM55_RS12690 IPR012341 Six-hairpin glycosidase-like superfamily DM55_RS12690 IPR008928 Six-hairpin glycosidase superfamily DM55_RS12695 IPR019405 Lactonase, 7-bladed beta propeller DM55_RS12695 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DM55_RS12695 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DM55_RS12705 IPR025199 DNA translocase FtsK, 4TM region DM55_RS12705 IPR041027 FtsK alpha domain DM55_RS12705 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS12705 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS12705 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12705 IPR003593 AAA+ ATPase domain DM55_RS12705 IPR018541 FtsK gamma domain DM55_RS12705 IPR002543 FtsK domain DM55_RS12720 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS12720 IPR001509 NAD-dependent epimerase/dehydratase DM55_RS12720 IPR016185 Pre-ATP-grasp domain superfamily DM55_RS12720 IPR011054 Rudiment single hybrid motif DM55_RS12720 IPR011761 ATP-grasp fold DM55_RS12720 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DM55_RS12720 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase DM55_RS12730 IPR018660 C-type lysozyme inhibitor DM55_RS12730 IPR036328 C-type lysozyme inhibitor superfamily DM55_RS12735 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DM55_RS12735 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12735 IPR001650 Helicase, C-terminal DM55_RS12735 IPR014001 Helicase superfamily 1/2, ATP-binding domain DM55_RS12735 IPR011545 DEAD/DEAH box helicase domain DM55_RS12735 IPR014014 RNA helicase, DEAD-box type, Q motif DM55_RS12735 IPR028622 ATP-dependent RNA helicase RhlE DM55_RS12740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS12740 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DM55_RS12740 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DM55_RS12740 IPR022380 Glutamyl-Q tRNA(Asp) synthetase DM55_RS12745 IPR001763 Rhodanese-like domain DM55_RS12745 IPR020936 Uncharacterised protein family UPF0176 DM55_RS12745 IPR036873 Rhodanese-like domain superfamily DM55_RS12745 IPR040503 UPF0176, acylphosphatase-like domain DM55_RS12755 IPR004013 PHP domain DM55_RS12755 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain DM55_RS12755 IPR040982 DNA polymerase III alpha subunit finger domain DM55_RS12755 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DM55_RS12755 IPR016195 Polymerase/histidinol phosphatase-like DM55_RS12755 IPR004805 DNA polymerase III, alpha subunit DM55_RS12755 IPR003141 Polymerase/histidinol phosphatase, N-terminal DM55_RS12755 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain DM55_RS12755 IPR029460 DNA polymerase, helix-hairpin-helix motif DM55_RS12760 IPR036640 ABC transporter type 1, transmembrane domain superfamily DM55_RS12760 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS12760 IPR003593 AAA+ ATPase domain DM55_RS12760 IPR003439 ABC transporter-like DM55_RS12760 IPR017871 ABC transporter, conserved site DM55_RS12760 IPR011917 ABC transporter, lipid A export, MsbA DM55_RS12760 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12765 IPR001296 Glycosyl transferase, family 1 DM55_RS12765 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DM55_RS12780 IPR001296 Glycosyl transferase, family 1 DM55_RS12780 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DM55_RS12785 IPR011916 Lipopolysaccharide heptosyltransferase III, putative DM55_RS12785 IPR002201 Glycosyl transferase, family 9 DM55_RS12790 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS12790 IPR001173 Glycosyltransferase 2-like DM55_RS12805 IPR036259 MFS transporter superfamily DM55_RS12805 IPR011701 Major facilitator superfamily DM55_RS12805 IPR020846 Major facilitator superfamily domain DM55_RS12815 IPR004675 Alkylhydroperoxidase AhpD core DM55_RS12815 IPR029032 AhpD-like DM55_RS12815 IPR003779 Carboxymuconolactone decarboxylase-like DM55_RS12820 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS12820 IPR037401 SnoaL-like domain DM55_RS12820 IPR013324 RNA polymerase sigma factor, region 3/4-like DM55_RS12820 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DM55_RS12820 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS12820 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS12820 IPR014284 RNA polymerase sigma-70 like domain DM55_RS12820 IPR032710 NTF2-like domain superfamily DM55_RS12855 IPR006042 Xanthine/uracil permease DM55_RS12855 IPR006043 Xanthine/uracil/vitamin C permease DM55_RS12860 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DM55_RS12860 IPR022967 RNA-binding domain, S1 DM55_RS12860 IPR003029 S1 domain DM55_RS12860 IPR012340 Nucleic acid-binding, OB-fold DM55_RS12860 IPR004659 Ribonuclease E/G DM55_RS12865 IPR029001 Inosine triphosphate pyrophosphatase-like DM55_RS12865 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein DM55_RS12870 IPR003742 RNA methyltransferase RlmH DM55_RS12870 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS12870 IPR029028 Alpha/beta knot methyltransferases DM55_RS12875 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DM55_RS12880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS12880 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase DM55_RS12880 IPR004821 Cytidyltransferase-like domain DM55_RS12885 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily DM55_RS12885 IPR018375 Coproporphyrinogen III oxidase, conserved site DM55_RS12885 IPR001260 Coproporphyrinogen III oxidase, aerobic DM55_RS12890 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DM55_RS12890 IPR000115 Phosphoribosylglycinamide synthetase DM55_RS12890 IPR016185 Pre-ATP-grasp domain superfamily DM55_RS12890 IPR011054 Rudiment single hybrid motif DM55_RS12890 IPR020560 Phosphoribosylglycinamide synthetase, C-domain DM55_RS12890 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily DM55_RS12890 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal DM55_RS12890 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS12890 IPR011761 ATP-grasp fold DM55_RS12895 IPR017856 Integrase-like, N-terminal DM55_RS12895 IPR029072 YebC-like DM55_RS12895 IPR002876 Transcriptional regulator TACO1-like DM55_RS12895 IPR026564 Transcriptional regulator TACO1-like, domain 3 DM55_RS12900 IPR034332 Uracil phosphoribosyltransferase, bacterial-type DM55_RS12900 IPR000836 Phosphoribosyltransferase domain DM55_RS12900 IPR005765 Uracil phosphoribosyl transferase DM55_RS12900 IPR029057 Phosphoribosyltransferase-like DM55_RS12905 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS12905 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS12905 IPR036291 NAD(P)-binding domain superfamily DM55_RS12910 IPR018148 Methylglyoxal synthase, active site DM55_RS12910 IPR011607 Methylglyoxal synthase-like domain DM55_RS12910 IPR036914 Methylglyoxal synthase-like domain superfamily DM55_RS12910 IPR004363 Methylglyoxal synthase DM55_RS12915 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site DM55_RS12915 IPR013154 Alcohol dehydrogenase, N-terminal DM55_RS12915 IPR020843 Polyketide synthase, enoylreductase domain DM55_RS12915 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS12915 IPR011032 GroES-like superfamily DM55_RS12915 IPR036291 NAD(P)-binding domain superfamily DM55_RS12925 IPR004623 Potassium-transporting ATPase A chain DM55_RS12930 IPR008250 P-type ATPase, A domain superfamily DM55_RS12930 IPR036412 HAD-like superfamily DM55_RS12930 IPR006391 P-type ATPase, B chain, subfamily IA DM55_RS12930 IPR023214 HAD superfamily DM55_RS12930 IPR023299 P-type ATPase, cytoplasmic domain N DM55_RS12930 IPR018303 P-type ATPase, phosphorylation site DM55_RS12930 IPR001757 P-type ATPase DM55_RS12930 IPR023298 P-type ATPase, transmembrane domain superfamily DM55_RS12935 IPR003820 Potassium-transporting ATPase C chain DM55_RS12945 IPR038318 KdpD, transmembrane domain superfamily DM55_RS12945 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS12945 IPR025201 Sensor protein KdpD, transmembrane domain DM55_RS12945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS12945 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal DM55_RS12945 IPR003018 GAF domain DM55_RS12945 IPR029016 GAF-like domain superfamily DM55_RS12945 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS12945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS12945 IPR005467 Histidine kinase domain DM55_RS12945 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS12950 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS12950 IPR001789 Signal transduction response regulator, receiver domain DM55_RS12950 IPR001867 OmpR/PhoB-type DNA-binding domain DM55_RS12950 IPR039420 Transcriptional regulatory protein WalR-like DM55_RS12950 IPR011006 CheY-like superfamily DM55_RS12960 IPR000390 Small multidrug resistance protein family DM55_RS12980 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily DM55_RS12980 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DM55_RS12980 IPR003156 DHHA1 domain DM55_RS12980 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS12980 IPR002318 Alanine-tRNA ligase, class IIc DM55_RS12980 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria DM55_RS12980 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal DM55_RS12980 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain DM55_RS12980 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily DM55_RS12990 IPR000120 Amidase DM55_RS12990 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit DM55_RS12990 IPR036928 Amidase signature (AS) superfamily DM55_RS12990 IPR020556 Amidase, conserved site DM55_RS12990 IPR023631 Amidase signature domain DM55_RS12995 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS12995 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS12995 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS13000 IPR020846 Major facilitator superfamily domain DM55_RS13000 IPR036259 MFS transporter superfamily DM55_RS13000 IPR004736 MFS transporter, metabolite:H symporter DM55_RS13000 IPR005829 Sugar transporter, conserved site DM55_RS13000 IPR011701 Major facilitator superfamily DM55_RS13005 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase DM55_RS13005 IPR003342 Glycosyl transferase family 39/83 DM55_RS13010 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS13010 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS13010 IPR036291 NAD(P)-binding domain superfamily DM55_RS13015 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DM55_RS13015 IPR031100 LOG family DM55_RS13020 IPR013571 Transcription regulator QacR, C-terminal DM55_RS13020 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS13020 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DM55_RS13020 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DM55_RS13020 IPR009057 Homeobox-like domain superfamily DM55_RS13025 IPR000829 DAGK family DM55_RS13025 IPR033718 Diacylglycerol kinase, prokaryotic DM55_RS13025 IPR036945 Diacylglycerol kinase (DAGK) superfamily DM55_RS13030 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain DM55_RS13030 IPR017814 Mycothiol biosynthesis protein, MshA DM55_RS13030 IPR001296 Glycosyl transferase, family 1 DM55_RS13060 IPR012000 Thiamine pyrophosphate enzyme, central domain DM55_RS13060 IPR029061 Thiamin diphosphate-binding fold DM55_RS13060 IPR039368 Acetolactate synthase large subunit, TPP binding domain DM55_RS13060 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DM55_RS13060 IPR000399 TPP-binding enzyme, conserved site DM55_RS13060 IPR012846 Acetolactate synthase, large subunit, biosynthetic DM55_RS13060 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DM55_RS13060 IPR029035 DHS-like NAD/FAD-binding domain superfamily DM55_RS13065 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DM55_RS13065 IPR019455 Acetolactate synthase, small subunit, C-terminal DM55_RS13065 IPR004789 Acetolactate synthase, small subunit DM55_RS13065 IPR039557 AHAS, ACT domain DM55_RS13065 IPR002912 ACT domain DM55_RS13070 IPR013023 Ketol-acid reductoisomerase DM55_RS13070 IPR013116 Ketol-acid reductoisomerase, N-terminal DM55_RS13070 IPR014359 Ketol-acid reductoisomerase, prokaryotic DM55_RS13070 IPR036291 NAD(P)-binding domain superfamily DM55_RS13070 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS13070 IPR000506 Ketol-acid reductoisomerase, C-terminal DM55_RS13075 IPR003817 Phosphatidylserine decarboxylase-related DM55_RS13075 IPR033175 Phosphatidylserine decarboxylase, archaeal-type DM55_RS13080 IPR000462 CDP-alcohol phosphatidyltransferase DM55_RS13080 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase DM55_RS13085 IPR009057 Homeobox-like domain superfamily DM55_RS13085 IPR002514 Transposase IS3/IS911family DM55_RS13090 IPR001584 Integrase, catalytic core DM55_RS13090 IPR036397 Ribonuclease H superfamily DM55_RS13090 IPR012337 Ribonuclease H-like superfamily DM55_RS13090 IPR025948 HTH-like domain DM55_RS13100 IPR001902 SLC26A/SulP transporter DM55_RS13100 IPR002645 STAS domain DM55_RS13100 IPR036513 STAS domain superfamily DM55_RS13100 IPR011547 SLC26A/SulP transporter domain DM55_RS13105 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site DM55_RS13105 IPR036874 Carbonic anhydrase superfamily DM55_RS13105 IPR001765 Carbonic anhydrase DM55_RS13115 IPR028081 Leucine-binding protein domain DM55_RS13115 IPR028082 Periplasmic binding protein-like I DM55_RS13115 IPR000709 Leu/Ile/Val-binding protein DM55_RS13120 IPR009068 S15/NS1, RNA-binding DM55_RS13120 IPR005290 Ribosomal protein S15, bacterial-type DM55_RS13120 IPR000589 Ribosomal protein S15 DM55_RS13125 IPR001247 Exoribonuclease, phosphorolytic domain 1 DM55_RS13125 IPR015847 Exoribonuclease, phosphorolytic domain 2 DM55_RS13125 IPR036345 Exoribonuclease, PH domain 2 superfamily DM55_RS13125 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain DM55_RS13125 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily DM55_RS13125 IPR022967 RNA-binding domain, S1 DM55_RS13125 IPR004087 K Homology domain DM55_RS13125 IPR003029 S1 domain DM55_RS13125 IPR027408 PNPase/RNase PH domain superfamily DM55_RS13125 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS13125 IPR012340 Nucleic acid-binding, OB-fold DM55_RS13125 IPR036612 K Homology domain, type 1 superfamily DM55_RS13125 IPR004088 K Homology domain, type 1 DM55_RS13125 IPR012162 Polyribonucleotide nucleotidyltransferase DM55_RS13130 IPR006162 Phosphopantetheine attachment site DM55_RS13130 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DM55_RS13130 IPR009081 Phosphopantetheine binding ACP domain DM55_RS13130 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS13130 IPR014043 Acyl transferase DM55_RS13130 IPR020807 Polyketide synthase, dehydratase domain DM55_RS13130 IPR042104 Polyketide synthase, dehydratase domain superfamily DM55_RS13130 IPR013968 Polyketide synthase, ketoreductase domain DM55_RS13130 IPR011032 GroES-like superfamily DM55_RS13130 IPR013154 Alcohol dehydrogenase, N-terminal DM55_RS13130 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS13130 IPR036291 NAD(P)-binding domain superfamily DM55_RS13130 IPR036736 ACP-like superfamily DM55_RS13130 IPR020843 Polyketide synthase, enoylreductase domain DM55_RS13130 IPR001227 Acyl transferase domain superfamily DM55_RS13135 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic DM55_RS13135 IPR020861 Triosephosphate isomerase, active site DM55_RS13135 IPR013785 Aldolase-type TIM barrel DM55_RS13135 IPR000652 Triosephosphate isomerase DM55_RS13135 IPR035990 Triosephosphate isomerase superfamily DM55_RS13140 IPR004692 Preprotein translocase SecG subunit DM55_RS13150 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 DM55_RS13150 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily DM55_RS13150 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid DM55_RS13155 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DM55_RS13155 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit DM55_RS13160 IPR010218 NADH dehydrogenase, subunit C DM55_RS13160 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site DM55_RS13160 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit DM55_RS13160 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily DM55_RS13165 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site DM55_RS13165 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily DM55_RS13165 IPR001135 NADH-quinone oxidoreductase, subunit D DM55_RS13165 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H DM55_RS13165 IPR029014 [NiFe]-hydrogenase, large subunit DM55_RS13170 IPR042128 NuoE domain DM55_RS13170 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal DM55_RS13170 IPR036249 Thioredoxin-like superfamily DM55_RS13170 IPR002023 NADH-quinone oxidoreductase subunit E-like DM55_RS13175 IPR011537 NADH ubiquinone oxidoreductase, F subunit DM55_RS13175 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site DM55_RS13175 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain DM55_RS13175 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily DM55_RS13175 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily DM55_RS13175 IPR019554 Soluble ligand binding domain DM55_RS13175 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain DM55_RS13180 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding DM55_RS13180 IPR006656 Molybdopterin oxidoreductase DM55_RS13180 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DM55_RS13180 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DM55_RS13180 IPR036010 2Fe-2S ferredoxin-like superfamily DM55_RS13180 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal DM55_RS13180 IPR010228 NADH:ubiquinone oxidoreductase, subunit G DM55_RS13180 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site DM55_RS13185 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site DM55_RS13185 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H DM55_RS13190 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS13190 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS13190 IPR010226 NADH-quinone oxidoreductase, chain I DM55_RS13195 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 DM55_RS13195 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ DM55_RS13200 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K DM55_RS13200 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DM55_RS13205 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal DM55_RS13205 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 DM55_RS13205 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DM55_RS13205 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup DM55_RS13210 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DM55_RS13210 IPR003918 NADH:ubiquinone oxidoreductase DM55_RS13210 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal DM55_RS13210 IPR010227 NADH-quinone oxidoreductase, chain M/4 DM55_RS13215 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 DM55_RS13215 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit DM55_RS13225 IPR020084 NUDIX hydrolase, conserved site DM55_RS13225 IPR015797 NUDIX hydrolase-like domain superfamily DM55_RS13225 IPR004385 Nucleoside diphosphate pyrophosphatase DM55_RS13225 IPR000086 NUDIX hydrolase domain DM55_RS13235 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS13235 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS13235 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DM55_RS13235 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS13235 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS13235 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS13240 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS13240 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS13240 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DM55_RS13240 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS13240 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS13240 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS13245 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS13245 IPR029069 HotDog domain superfamily DM55_RS13245 IPR015590 Aldehyde dehydrogenase domain DM55_RS13245 IPR011966 Phenylacetic acid degradation protein PaaN DM55_RS13245 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS13245 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS13245 IPR002539 MaoC-like dehydratase domain DM55_RS13250 IPR039375 Nodulation protein N-like DM55_RS13250 IPR029069 HotDog domain superfamily DM55_RS13250 IPR002539 MaoC-like dehydratase domain DM55_RS13265 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS13265 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS13265 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS13265 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS13265 IPR006089 Acyl-CoA dehydrogenase, conserved site DM55_RS13265 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DM55_RS13265 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS13275 IPR013078 Histidine phosphatase superfamily, clade-1 DM55_RS13275 IPR005952 Phosphoglycerate mutase 1 DM55_RS13275 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DM55_RS13275 IPR029033 Histidine phosphatase superfamily DM55_RS13280 IPR014748 Enoyl-CoA hydratase, C-terminal DM55_RS13280 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS13280 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB DM55_RS13280 IPR001753 Enoyl-CoA hydratase/isomerase DM55_RS13290 IPR004839 Aminotransferase, class I/classII DM55_RS13290 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS13290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS13290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS13300 IPR005583 Peroxide stress protein YaaA DM55_RS13305 IPR000834 Peptidase M14, carboxypeptidase A DM55_RS13305 IPR040626 Cytosolic carboxypeptidase, N-terminal DM55_RS13320 IPR001789 Signal transduction response regulator, receiver domain DM55_RS13320 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS13320 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS13320 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS13320 IPR011006 CheY-like superfamily DM55_RS13360 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS13360 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS13360 IPR000944 Transcription regulator Rrf2-type DM55_RS13365 IPR008279 PEP-utilising enzyme, mobile domain DM55_RS13365 IPR036291 NAD(P)-binding domain superfamily DM55_RS13365 IPR001509 NAD-dependent epimerase/dehydratase DM55_RS13365 IPR036637 Phosphohistidine domain superfamily DM55_RS13375 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS13375 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS13375 IPR000485 AsnC-type HTH domain DM55_RS13375 IPR011008 Dimeric alpha-beta barrel DM55_RS13375 IPR019888 Transcription regulator AsnC-type DM55_RS13375 IPR011991 ArsR-like helix-turn-helix domain DM55_RS13375 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DM55_RS13375 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DM55_RS13380 IPR015853 ABC transporter, ferric cation import, FbpC DM55_RS13380 IPR013611 Transport-associated OB, type 2 DM55_RS13380 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13380 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS13380 IPR017871 ABC transporter, conserved site DM55_RS13380 IPR003593 AAA+ ATPase domain DM55_RS13380 IPR003439 ABC transporter-like DM55_RS13385 IPR035906 MetI-like superfamily DM55_RS13385 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS13390 IPR006059 Bacterial extracellular solute-binding protein DM55_RS13390 IPR026045 Ferric binding protein DM55_RS13400 IPR004840 Amino acid permease, conserved site DM55_RS13400 IPR004841 Amino acid permease/ SLC12A domain DM55_RS13405 IPR032692 Integral membrane protein YccS, N-terminal DM55_RS13405 IPR010020 Integral membrane protein, YccS/YhfK DM55_RS13405 IPR010019 Integral membrane protein, YccS DM55_RS13420 IPR041500 RecC, C-terminal DM55_RS13420 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13420 IPR006697 RecBCD enzyme subunit RecC DM55_RS13420 IPR011335 Restriction endonuclease type II-like DM55_RS13420 IPR013986 DExx box DNA helicase domain superfamily DM55_RS13425 IPR004586 RecBCD enzyme subunit RecB DM55_RS13425 IPR011335 Restriction endonuclease type II-like DM55_RS13425 IPR014016 UvrD-like helicase, ATP-binding domain DM55_RS13425 IPR014017 UvrD-like DNA helicase, C-terminal DM55_RS13425 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DM55_RS13425 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13425 IPR034739 UvrD/AddA helicase, N-terminal DM55_RS13425 IPR000212 DNA helicase, UvrD/REP type DM55_RS13425 IPR011604 Exonuclease, phage-type/RecB, C-terminal DM55_RS13430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13430 IPR003593 AAA+ ATPase domain DM55_RS13430 IPR027785 UvrD-like helicase C-terminal domain DM55_RS13430 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain DM55_RS13430 IPR006344 RecBCD enzyme subunit RecD DM55_RS13435 IPR000352 Peptide chain release factor class I DM55_RS13440 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain DM55_RS13440 IPR001633 EAL domain DM55_RS13440 IPR035919 EAL domain superfamily DM55_RS13460 IPR002514 Transposase IS3/IS911family DM55_RS13460 IPR009057 Homeobox-like domain superfamily DM55_RS13465 IPR025948 HTH-like domain DM55_RS13465 IPR001584 Integrase, catalytic core DM55_RS13465 IPR012337 Ribonuclease H-like superfamily DM55_RS13465 IPR036397 Ribonuclease H superfamily DM55_RS13470 IPR038521 ThiC/Bza superfamily DM55_RS13470 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B DM55_RS13470 IPR037509 Phosphomethylpyrimidine synthase DM55_RS13470 IPR025747 ThiC-associated domain DM55_RS13485 IPR016174 Di-haem cytochrome, transmembrane DM55_RS13485 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DM55_RS13490 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily DM55_RS13490 IPR000572 Oxidoreductase, molybdopterin-binding domain DM55_RS13500 IPR000620 EamA domain DM55_RS13500 IPR004779 Carboxylate/Amino Acid/Amine Transporter DM55_RS13505 IPR036259 MFS transporter superfamily DM55_RS13505 IPR011701 Major facilitator superfamily DM55_RS13505 IPR020846 Major facilitator superfamily domain DM55_RS13525 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA DM55_RS13525 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type DM55_RS13525 IPR042283 GpdQ, catalytic alpha/beta sandwich domain DM55_RS13525 IPR042281 GpdQ, beta-strand dimerisation domain DM55_RS13530 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA DM55_RS13530 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13530 IPR013611 Transport-associated OB, type 2 DM55_RS13530 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit DM55_RS13530 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS13530 IPR003593 AAA+ ATPase domain DM55_RS13530 IPR003439 ABC transporter-like DM55_RS13530 IPR017871 ABC transporter, conserved site DM55_RS13535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS13535 IPR035906 MetI-like superfamily DM55_RS13550 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS13550 IPR005667 Sulphate ABC transporter permease protein 2 DM55_RS13550 IPR011865 Sulphate ABC transporter, permease protein CysT DM55_RS13550 IPR035906 MetI-like superfamily DM55_RS13555 IPR026045 Ferric binding protein DM55_RS13555 IPR006311 Twin-arginine translocation pathway, signal sequence DM55_RS13560 IPR000843 LacI-type HTH domain DM55_RS13560 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DM55_RS13560 IPR028082 Periplasmic binding protein-like I DM55_RS13580 IPR001789 Signal transduction response regulator, receiver domain DM55_RS13580 IPR011006 CheY-like superfamily DM55_RS13580 IPR000160 GGDEF domain DM55_RS13580 IPR029787 Nucleotide cyclase DM55_RS13590 IPR009057 Homeobox-like domain superfamily DM55_RS13590 IPR002514 Transposase IS3/IS911family DM55_RS13610 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS13610 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS13610 IPR000524 Transcription regulator HTH, GntR DM55_RS13610 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS13610 IPR004839 Aminotransferase, class I/classII DM55_RS13610 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS13620 IPR011008 Dimeric alpha-beta barrel DM55_RS13620 IPR019888 Transcription regulator AsnC-type DM55_RS13620 IPR000485 AsnC-type HTH domain DM55_RS13620 IPR011991 ArsR-like helix-turn-helix domain DM55_RS13620 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS13620 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DM55_RS13620 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS13620 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DM55_RS13625 IPR035466 GlmS/AgaS, SIS domain 1 DM55_RS13625 IPR001347 Sugar isomerase (SIS) DM55_RS13625 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS13625 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DM55_RS13625 IPR035490 GlmS/FrlB, SIS domain 2 DM55_RS13625 IPR017932 Glutamine amidotransferase type 2 domain DM55_RS13630 IPR004294 Carotenoid oxygenase DM55_RS13640 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS13640 IPR000847 Transcription regulator HTH, LysR DM55_RS13640 IPR005119 LysR, substrate-binding DM55_RS13640 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS13670 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS13670 IPR004839 Aminotransferase, class I/classII DM55_RS13670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS13670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS13670 IPR000524 Transcription regulator HTH, GntR DM55_RS13670 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS13670 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS13685 IPR031107 Small heat shock protein HSP20 DM55_RS13685 IPR002068 Alpha crystallin/Hsp20 domain DM55_RS13685 IPR008978 HSP20-like chaperone DM55_RS13705 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site DM55_RS13705 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal DM55_RS13705 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising DM55_RS13705 IPR035077 Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain DM55_RS13705 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal DM55_RS13705 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal DM55_RS13710 IPR036291 NAD(P)-binding domain superfamily DM55_RS13710 IPR026578 L-carnitine dehydrogenase DM55_RS13710 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS13710 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS13710 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS13710 IPR013328 6-phosphogluconate dehydrogenase, domain 2 DM55_RS13715 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS13715 IPR000847 Transcription regulator HTH, LysR DM55_RS13715 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS13715 IPR005119 LysR, substrate-binding DM55_RS13735 IPR005777 Acetyl-S-ACP:malonate ACP transferase DM55_RS13735 IPR037171 NagB/RpiA transferase-like DM55_RS13740 IPR009662 Malonate decarboxylase delta subunit DM55_RS13740 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DM55_RS13745 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal DM55_RS13745 IPR034733 Acetyl-CoA carboxylase DM55_RS13745 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS13745 IPR017556 Biotin-independent malonate decarboxylase, beta subunit DM55_RS13755 IPR017557 Phosphoribosyl-dephospho-CoA transferase DM55_RS13760 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG DM55_RS13760 IPR002736 Triphosphoribosyl-dephospho-CoA protein DM55_RS13765 IPR001227 Acyl transferase domain superfamily DM55_RS13765 IPR014043 Acyl transferase DM55_RS13765 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS13765 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DM55_RS13770 IPR025202 Phospholipase D-like domain DM55_RS13770 IPR001736 Phospholipase D/Transphosphatidylase DM55_RS13795 IPR009057 Homeobox-like domain superfamily DM55_RS13795 IPR002514 Transposase IS3/IS911family DM55_RS13810 IPR005828 Major facilitator, sugar transporter-like DM55_RS13810 IPR004736 MFS transporter, metabolite:H symporter DM55_RS13810 IPR015041 Osmosensory transporter coiled coil DM55_RS13810 IPR020846 Major facilitator superfamily domain DM55_RS13810 IPR036292 Proline/betaine transporter ProP, C-terminal DM55_RS13810 IPR036259 MFS transporter superfamily DM55_RS13810 IPR005829 Sugar transporter, conserved site DM55_RS13815 IPR003844 Uncharacterised protein family UPF0060 DM55_RS13820 IPR036397 Ribonuclease H superfamily DM55_RS13820 IPR013520 Exonuclease, RNase T/DNA polymerase III DM55_RS13820 IPR006309 DNA polymerase 3, epsilon subunit DM55_RS13820 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain DM55_RS13820 IPR012337 Ribonuclease H-like superfamily DM55_RS13825 IPR012337 Ribonuclease H-like superfamily DM55_RS13825 IPR002156 Ribonuclease H domain DM55_RS13825 IPR036397 Ribonuclease H superfamily DM55_RS13825 IPR022892 Ribonuclease HI DM55_RS13830 IPR026669 Arsenite methyltransferase-like DM55_RS13830 IPR013216 Methyltransferase type 11 DM55_RS13830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS13835 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain DM55_RS13835 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DM55_RS13835 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain DM55_RS13835 IPR017782 Hydroxyacylglutathione hydrolase DM55_RS13835 IPR001279 Metallo-beta-lactamase DM55_RS13840 IPR000189 Prokaryotic transglycosylase, active site DM55_RS13840 IPR018392 LysM domain DM55_RS13840 IPR036779 LysM domain superfamily DM55_RS13840 IPR008258 Transglycosylase SLT domain 1 DM55_RS13840 IPR023346 Lysozyme-like domain superfamily DM55_RS13855 IPR020449 Transcription regulator HTH, AraC- type DM55_RS13855 IPR009057 Homeobox-like domain superfamily DM55_RS13855 IPR018060 DNA binding HTH domain, AraC-type DM55_RS13855 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DM55_RS13860 IPR017926 Glutamine amidotransferase DM55_RS13860 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain DM55_RS13860 IPR006274 Carbamoyl-phosphate synthase, small subunit DM55_RS13860 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain DM55_RS13860 IPR029062 Class I glutamine amidotransferase-like DM55_RS13860 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily DM55_RS13865 IPR004778 Homoserine/Threonine efflux protein DM55_RS13865 IPR001123 Amino acid exporter protein, LeuE-type DM55_RS13870 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily DM55_RS13870 IPR006275 Carbamoyl-phosphate synthase, large subunit DM55_RS13870 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain DM55_RS13870 IPR011761 ATP-grasp fold DM55_RS13870 IPR036914 Methylglyoxal synthase-like domain superfamily DM55_RS13870 IPR011607 Methylglyoxal synthase-like domain DM55_RS13870 IPR016185 Pre-ATP-grasp domain superfamily DM55_RS13870 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain DM55_RS13870 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DM55_RS13870 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain DM55_RS13875 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DM55_RS13875 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal DM55_RS13875 IPR028624 Transcription elongation factor GreA/GreB DM55_RS13875 IPR006359 Transcription elongation factor GreA DM55_RS13875 IPR018151 Transcription elongation factor, GreA/GreB, conserved site DM55_RS13875 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily DM55_RS13875 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily DM55_RS13875 IPR023459 Transcription elongation factor GreA/GreB family DM55_RS13885 IPR035920 YhbY-like superfamily DM55_RS13885 IPR017924 RNA-binding protein YhbY DM55_RS13885 IPR001890 RNA-binding, CRM domain DM55_RS13890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS13890 IPR002877 Ribosomal RNA methyltransferase FtsJ domain DM55_RS13890 IPR015507 Ribosomal RNA large subunit methyltransferase E DM55_RS13895 IPR003593 AAA+ ATPase domain DM55_RS13895 IPR005936 Peptidase, FtsH DM55_RS13895 IPR000642 Peptidase M41 DM55_RS13895 IPR011546 Peptidase M41, FtsH extracellular DM55_RS13895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13895 IPR003959 ATPase, AAA-type, core DM55_RS13895 IPR003960 ATPase, AAA-type, conserved site DM55_RS13895 IPR041569 AAA ATPase, AAA+ lid domain DM55_RS13895 IPR037219 Peptidase M41-like DM55_RS13900 IPR011005 Dihydropteroate synthase-like DM55_RS13900 IPR006390 Dihydropteroate synthase DM55_RS13900 IPR000489 Pterin-binding domain DM55_RS13905 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DM55_RS13905 IPR005841 Alpha-D-phosphohexomutase superfamily DM55_RS13905 IPR016066 Alpha-D-phosphohexomutase, conserved site DM55_RS13905 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily DM55_RS13905 IPR005843 Alpha-D-phosphohexomutase, C-terminal DM55_RS13905 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DM55_RS13905 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DM55_RS13905 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DM55_RS13905 IPR006352 Phosphoglucosamine mutase, bacterial type DM55_RS13910 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS DM55_RS13910 IPR024370 PBP domain DM55_RS13915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS13915 IPR035906 MetI-like superfamily DM55_RS13915 IPR011864 Phosphate ABC transporter, permease protein PstC DM55_RS13920 IPR005672 Phosphate transport system permease protein PstA DM55_RS13920 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS13920 IPR035906 MetI-like superfamily DM55_RS13925 IPR005670 Phosphate transport system permease protein 1 DM55_RS13925 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13925 IPR015850 ABC transporter, phosphate import, PstB DM55_RS13925 IPR003439 ABC transporter-like DM55_RS13925 IPR003593 AAA+ ATPase domain DM55_RS13925 IPR017871 ABC transporter, conserved site DM55_RS13930 IPR038078 PhoU-like domain superfamily DM55_RS13930 IPR028366 Phosphate transport system protein PhoU DM55_RS13930 IPR026022 PhoU domain DM55_RS13935 IPR011006 CheY-like superfamily DM55_RS13935 IPR001867 OmpR/PhoB-type DNA-binding domain DM55_RS13935 IPR001789 Signal transduction response regulator, receiver domain DM55_RS13935 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB DM55_RS13935 IPR039420 Transcriptional regulatory protein WalR-like DM55_RS13935 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS13940 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily DM55_RS13940 IPR000014 PAS domain DM55_RS13940 IPR035965 PAS domain superfamily DM55_RS13940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS13940 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain DM55_RS13940 IPR021766 Phosphate regulon sensor protein PhoR DM55_RS13940 IPR003594 Histidine kinase/HSP90-like ATPase DM55_RS13940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DM55_RS13940 IPR005467 Histidine kinase domain DM55_RS13940 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR DM55_RS13940 IPR013767 PAS fold DM55_RS13945 IPR003414 Polyphosphate kinase DM55_RS13945 IPR041108 Polyphosphate kinase, C-terminal domain 1 DM55_RS13945 IPR024953 Polyphosphate kinase middle domain DM55_RS13945 IPR036830 Polyphosphate kinase middle domain superfamily DM55_RS13945 IPR036832 Polyphosphate kinase N-terminal domain superfamily DM55_RS13945 IPR025198 Polyphosphate kinase N-terminal domain DM55_RS13945 IPR025200 Polyphosphate kinase C-terminal domain 2 DM55_RS13950 IPR030673 Pyrophosphatase, GppA/Ppx-type DM55_RS13950 IPR003695 Ppx/GppA phosphatase DM55_RS13950 IPR022371 Exopolyphosphatase DM55_RS14010 IPR002528 Multi antimicrobial extrusion protein DM55_RS14020 IPR000873 AMP-dependent synthetase/ligase DM55_RS14020 IPR020845 AMP-binding, conserved site DM55_RS14020 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS14020 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS14025 IPR036779 LysM domain superfamily DM55_RS14025 IPR016047 Peptidase M23 DM55_RS14025 IPR011055 Duplicated hybrid motif DM55_RS14025 IPR018392 LysM domain DM55_RS14035 IPR001584 Integrase, catalytic core DM55_RS14035 IPR036397 Ribonuclease H superfamily DM55_RS14035 IPR012337 Ribonuclease H-like superfamily DM55_RS14035 IPR025948 HTH-like domain DM55_RS14060 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP DM55_RS14060 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative DM55_RS14060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS14060 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp DM55_RS14065 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS14065 IPR004839 Aminotransferase, class I/classII DM55_RS14065 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS14065 IPR000524 Transcription regulator HTH, GntR DM55_RS14065 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS14065 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS14080 IPR017853 Glycoside hydrolase superfamily DM55_RS14080 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DM55_RS14080 IPR012767 Maltooligosyl trehalose synthase DM55_RS14085 IPR003385 Glycoside hydrolase, family 77 DM55_RS14085 IPR017853 Glycoside hydrolase superfamily DM55_RS14090 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) DM55_RS14090 IPR017853 Glycoside hydrolase superfamily DM55_RS14090 IPR013783 Immunoglobulin-like fold DM55_RS14090 IPR014756 Immunoglobulin E-set DM55_RS14090 IPR012768 Malto-oligosyltrehalose trehalohydrolase DM55_RS14090 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DM55_RS14095 IPR013780 Glycosyl hydrolase, all-beta DM55_RS14095 IPR004193 Glycoside hydrolase, family 13, N-terminal DM55_RS14095 IPR017853 Glycoside hydrolase superfamily DM55_RS14095 IPR014756 Immunoglobulin E-set DM55_RS14095 IPR011837 Glycogen debranching enzyme, GlgX type DM55_RS14095 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DM55_RS14095 IPR013783 Immunoglobulin-like fold DM55_RS14105 IPR012810 Trehalose synthase/alpha-amylase, N-terminal DM55_RS14105 IPR017853 Glycoside hydrolase superfamily DM55_RS14105 IPR032091 Maltogenic Amylase, C-terminal DM55_RS14105 IPR013780 Glycosyl hydrolase, all-beta DM55_RS14105 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DM55_RS14110 IPR013783 Immunoglobulin-like fold DM55_RS14110 IPR017853 Glycoside hydrolase superfamily DM55_RS14110 IPR013780 Glycosyl hydrolase, all-beta DM55_RS14110 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase DM55_RS14110 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S DM55_RS14110 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DM55_RS14120 IPR003961 Fibronectin type III DM55_RS14120 IPR036116 Fibronectin type III superfamily DM55_RS14120 IPR013783 Immunoglobulin-like fold DM55_RS14120 IPR010126 Esterase, PHB depolymerase DM55_RS14120 IPR029058 Alpha/Beta hydrolase fold DM55_RS14150 IPR000847 Transcription regulator HTH, LysR DM55_RS14150 IPR005119 LysR, substrate-binding DM55_RS14150 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS14150 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS14155 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS14155 IPR001867 OmpR/PhoB-type DNA-binding domain DM55_RS14155 IPR011006 CheY-like superfamily DM55_RS14155 IPR039420 Transcriptional regulatory protein WalR-like DM55_RS14155 IPR001789 Signal transduction response regulator, receiver domain DM55_RS14165 IPR008617 Uncharacterised protein family, YcgJ DM55_RS14180 IPR039420 Transcriptional regulatory protein WalR-like DM55_RS14180 IPR011006 CheY-like superfamily DM55_RS14180 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS14180 IPR001789 Signal transduction response regulator, receiver domain DM55_RS14180 IPR001867 OmpR/PhoB-type DNA-binding domain DM55_RS14190 IPR008640 Head domain of trimeric autotransporter adhesin DM55_RS14190 IPR008635 Coiled stalk of trimeric autotransporter adhesin DM55_RS14190 IPR005594 YadA-like, C-terminal DM55_RS14190 IPR011049 Serralysin-like metalloprotease, C-terminal DM55_RS14195 IPR002368 Outer membrane protein, OmpA DM55_RS14195 IPR036737 OmpA-like domain superfamily DM55_RS14195 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DM55_RS14195 IPR000498 Outer membrane protein OmpA-like, transmembrane domain DM55_RS14195 IPR006665 OmpA-like domain DM55_RS14195 IPR006690 Outer membrane protein, OmpA-like, conserved site DM55_RS14195 IPR006664 Outer membrane protein, bacterial DM55_RS14200 IPR011990 Tetratricopeptide-like helical domain superfamily DM55_RS14200 IPR019734 Tetratricopeptide repeat DM55_RS14200 IPR013026 Tetratricopeptide repeat-containing domain DM55_RS14260 IPR006531 Gp5 N-terminal DM55_RS14260 IPR037026 Vgr protein, OB-fold domain superfamily DM55_RS14260 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein DM55_RS14260 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DM55_RS14270 IPR025948 HTH-like domain DM55_RS14270 IPR001584 Integrase, catalytic core DM55_RS14270 IPR036397 Ribonuclease H superfamily DM55_RS14270 IPR012337 Ribonuclease H-like superfamily DM55_RS14280 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DM55_RS14280 IPR000551 MerR-type HTH domain DM55_RS14280 IPR009061 Putative DNA-binding domain superfamily DM55_RS14280 IPR012925 TipAS antibiotic-recognition domain DM55_RS14290 IPR003423 Outer membrane efflux protein DM55_RS14290 IPR028351 Cyclolysin transport protein CyaE DM55_RS14295 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DM55_RS14295 IPR001036 Acriflavin resistance protein DM55_RS14300 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DM55_RS14300 IPR005695 Cobalt/zinc/cadmium resistance protein CzcB DM55_RS14300 IPR006143 RND efflux pump, membrane fusion protein DM55_RS14305 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DM55_RS14305 IPR009057 Homeobox-like domain superfamily DM55_RS14305 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DM55_RS14305 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS14305 IPR013572 Transcription regulator MAATS, C-terminal DM55_RS14310 IPR014743 Chloride channel, core DM55_RS14310 IPR023790 Chloride channel, voltage-gated, ClcB DM55_RS14310 IPR001807 Chloride channel, voltage gated DM55_RS14315 IPR004630 Uncharacterised protein family UPF0324, bacteria DM55_RS14315 IPR018383 Uncharacterised protein family UPF0324, prokaryote DM55_RS14320 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS14320 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS14320 IPR005119 LysR, substrate-binding DM55_RS14320 IPR000847 Transcription regulator HTH, LysR DM55_RS14335 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DM55_RS14335 IPR011611 Carbohydrate kinase PfkB DM55_RS14335 IPR029056 Ribokinase-like DM55_RS14340 IPR011701 Major facilitator superfamily DM55_RS14340 IPR036259 MFS transporter superfamily DM55_RS14340 IPR020846 Major facilitator superfamily domain DM55_RS14350 IPR000843 LacI-type HTH domain DM55_RS14350 IPR010982 Lambda repressor-like, DNA-binding domain superfamily DM55_RS14350 IPR023588 Transcription regulator HTH, PurR DM55_RS14350 IPR028082 Periplasmic binding protein-like I DM55_RS14385 IPR009081 Phosphopantetheine binding ACP domain DM55_RS14385 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS14385 IPR010060 Non-ribosomal peptide synthase DM55_RS14385 IPR001242 Condensation domain DM55_RS14385 IPR010071 Amino acid adenylation domain DM55_RS14385 IPR036736 ACP-like superfamily DM55_RS14385 IPR006162 Phosphopantetheine attachment site DM55_RS14385 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS14385 IPR020845 AMP-binding, conserved site DM55_RS14385 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS14385 IPR000873 AMP-dependent synthetase/ligase DM55_RS14385 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DM55_RS14440 IPR004488 Magnesium/cobalt transport protein CorA DM55_RS14440 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB DM55_RS14465 IPR010920 LSM domain superfamily DM55_RS14465 IPR006685 Mechanosensitive ion channel MscS DM55_RS14465 IPR024393 Mechanosensitive ion channel MscS, porin domain DM55_RS14465 IPR023408 Mechanosensitive ion channel MscS domain superfamily DM55_RS14465 IPR025692 Mechanosensitive ion channel inner membrane domain 1 DM55_RS14465 IPR023298 P-type ATPase, transmembrane domain superfamily DM55_RS14465 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DM55_RS14465 IPR006686 Mechanosensitive ion channel MscS, conserved site DM55_RS14465 IPR011066 Mechanosensitive ion channel MscS, C-terminal DM55_RS14470 IPR007329 FMN-binding DM55_RS14470 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS14470 IPR011399 Nitrous oxide reductase expression regulator NosR DM55_RS14495 IPR032688 ABC-2 family transporter protein DM55_RS14500 IPR003439 ABC transporter-like DM55_RS14500 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14500 IPR003593 AAA+ ATPase domain DM55_RS14500 IPR017871 ABC transporter, conserved site DM55_RS14505 IPR006633 Carbohydrate-binding/sugar hydrolysis domain DM55_RS14505 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain DM55_RS14505 IPR022441 Parallel beta-helix repeat-2 DM55_RS14505 IPR006626 Parallel beta-helix repeat DM55_RS14505 IPR012334 Pectin lyase fold DM55_RS14505 IPR026464 Nitrous oxide reductase family maturation protein NosD DM55_RS14505 IPR011050 Pectin lyase fold/virulence factor DM55_RS14510 IPR028096 EfeO-type cupredoxin-like domain DM55_RS14510 IPR041142 Nitrous oxide reductase, propeller repeat 2 DM55_RS14510 IPR041114 Nitrous oxide reductase, propeller repeat 1 DM55_RS14510 IPR034205 Nitrous-oxide reductase, C-terminal DM55_RS14510 IPR023644 Nitrous-oxide reductase DM55_RS14510 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DM55_RS14510 IPR006311 Twin-arginine translocation pathway, signal sequence DM55_RS14510 IPR011045 Nitrous oxide reductase, N-terminal DM55_RS14510 IPR008972 Cupredoxin DM55_RS14510 IPR002429 Cytochrome c oxidase subunit II-like C-terminal DM55_RS14515 IPR042159 Flavin-trafficking protein ApbE DM55_RS14515 IPR003374 ApbE-like superfamily DM55_RS14515 IPR024932 Flavin transferase ApbE DM55_RS14520 IPR003593 AAA+ ATPase domain DM55_RS14520 IPR015851 ABC transporter, NodI DM55_RS14520 IPR017871 ABC transporter, conserved site DM55_RS14520 IPR005978 Nodulation ABC transporter, NodI DM55_RS14520 IPR003439 ABC transporter-like DM55_RS14520 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14530 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS14530 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DM55_RS14530 IPR003660 HAMP domain DM55_RS14530 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DM55_RS14530 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DM55_RS14530 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS14540 IPR004007 DhaL domain DM55_RS14540 IPR036117 DhaL domain superfamily DM55_RS14540 IPR004006 DhaK domain DM55_RS14545 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DM55_RS14545 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DM55_RS14550 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DM55_RS14550 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily DM55_RS14555 IPR006153 Cation/H+ exchanger DM55_RS14555 IPR038770 Sodium/solute symporter superfamily DM55_RS14560 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS14560 IPR006905 Flavin-dependent halogenase DM55_RS14605 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS14605 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS14605 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS14620 IPR001829 Pili assembly chaperone, bacterial DM55_RS14620 IPR016148 Pili assembly chaperone, C-terminal DM55_RS14620 IPR016147 Pili assembly chaperone, N-terminal DM55_RS14620 IPR013783 Immunoglobulin-like fold DM55_RS14620 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DM55_RS14620 IPR018046 Pili assembly chaperone, conserved site DM55_RS14620 IPR008962 PapD-like superfamily DM55_RS14625 IPR000015 Outer membrane usher protein DM55_RS14625 IPR018030 Fimbrial membrane usher, conserved site DM55_RS14625 IPR042186 Outer membrane usher protein FimD, plug domain DM55_RS14625 IPR025949 PapC-like, C-terminal domain DM55_RS14625 IPR025885 PapC, N-terminal domain DM55_RS14625 IPR037224 PapC, N-terminal domain superfamily DM55_RS14655 IPR005594 YadA-like, C-terminal DM55_RS14655 IPR011049 Serralysin-like metalloprotease, C-terminal DM55_RS14655 IPR024973 ESPR domain DM55_RS14655 IPR008635 Coiled stalk of trimeric autotransporter adhesin DM55_RS14655 IPR008640 Head domain of trimeric autotransporter adhesin DM55_RS14670 IPR001789 Signal transduction response regulator, receiver domain DM55_RS14670 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS14670 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS14670 IPR011006 CheY-like superfamily DM55_RS14670 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS14670 IPR030864 Transcriptional regulatory protein RcsB DM55_RS14680 IPR002514 Transposase IS3/IS911family DM55_RS14680 IPR009057 Homeobox-like domain superfamily DM55_RS14685 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DM55_RS14685 IPR035906 MetI-like superfamily DM55_RS14685 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS14690 IPR001320 Ionotropic glutamate receptor DM55_RS14690 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DM55_RS14690 IPR018313 Solute-binding protein family 3, conserved site DM55_RS14695 IPR013785 Aldolase-type TIM barrel DM55_RS14695 IPR005720 Dihydroorotate dehydrogenase domain DM55_RS14695 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 DM55_RS14695 IPR005719 Dihydroorotate dehydrogenase, class 2 DM55_RS14695 IPR001295 Dihydroorotate dehydrogenase, conserved site DM55_RS14700 IPR007472 N-end rule aminoacyl transferase, C-terminal DM55_RS14700 IPR030700 N-end rule aminoacyl transferase DM55_RS14700 IPR017138 Aspartate/glutamate leucyltransferase DM55_RS14700 IPR016181 Acyl-CoA N-acyltransferase DM55_RS14700 IPR007471 N-end aminoacyl transferase, N-terminal DM55_RS14705 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase DM55_RS14705 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal DM55_RS14705 IPR016181 Acyl-CoA N-acyltransferase DM55_RS14710 IPR022925 NADH pyrophosphatase NudC DM55_RS14710 IPR015797 NUDIX hydrolase-like domain superfamily DM55_RS14710 IPR015376 Zinc ribbon, NADH pyrophosphatase DM55_RS14710 IPR000086 NUDIX hydrolase domain DM55_RS14710 IPR020084 NUDIX hydrolase, conserved site DM55_RS14720 IPR010371 Uncharacterised protein family UPF0303 DM55_RS14720 IPR005624 Haem-degrading DM55_RS14720 IPR038084 GlcG-like domain superfamily DM55_RS14725 IPR000390 Small multidrug resistance protein family DM55_RS14730 IPR001753 Enoyl-CoA hydratase/isomerase DM55_RS14730 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DM55_RS14730 IPR014748 Enoyl-CoA hydratase, C-terminal DM55_RS14730 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS14740 IPR011251 Luciferase-like domain DM55_RS14740 IPR036661 Luciferase-like domain superfamily DM55_RS14740 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent DM55_RS14745 IPR035906 MetI-like superfamily DM55_RS14745 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS14750 IPR003593 AAA+ ATPase domain DM55_RS14750 IPR003439 ABC transporter-like DM55_RS14750 IPR017871 ABC transporter, conserved site DM55_RS14750 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14750 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB DM55_RS14755 IPR004606 Molybdenum-pterin binding DM55_RS14755 IPR005116 Transport-associated OB, type 1 DM55_RS14755 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS14770 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS14770 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS14770 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS14780 IPR012337 Ribonuclease H-like superfamily DM55_RS14780 IPR036397 Ribonuclease H superfamily DM55_RS14780 IPR025948 HTH-like domain DM55_RS14780 IPR001584 Integrase, catalytic core DM55_RS14785 IPR016230 Serine-protein kinase, PrkA DM55_RS14785 IPR013153 PrkA AAA domain DM55_RS14785 IPR010650 PrkA C-terminal domain DM55_RS14785 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14790 IPR036465 von Willebrand factor A-like domain superfamily DM55_RS14790 IPR006698 Uncharacterised protein family UPF0229 DM55_RS14795 IPR007390 Sporulation stage V, protein R DM55_RS14800 IPR004736 MFS transporter, metabolite:H symporter DM55_RS14800 IPR005829 Sugar transporter, conserved site DM55_RS14800 IPR005828 Major facilitator, sugar transporter-like DM55_RS14800 IPR020846 Major facilitator superfamily domain DM55_RS14800 IPR036259 MFS transporter superfamily DM55_RS14815 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14815 IPR015859 ABC transporter, taurine import, TauD DM55_RS14815 IPR017871 ABC transporter, conserved site DM55_RS14815 IPR003439 ABC transporter-like DM55_RS14815 IPR003593 AAA+ ATPase domain DM55_RS14820 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS14820 IPR035906 MetI-like superfamily DM55_RS14840 IPR001775 GspD/PilQ family DM55_RS14840 IPR004846 Type II/III secretion system DM55_RS14840 IPR007055 BON domain DM55_RS14840 IPR014004 Transport-associated and nodulation domain, bacteria DM55_RS14840 IPR032789 Pilus formation protein, N-terminal DM55_RS14855 IPR001482 Type II/IV secretion system protein DM55_RS14855 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14855 IPR022399 Helicase/secretion neighbourhood ATPase DM55_RS14885 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DM55_RS14885 IPR018313 Solute-binding protein family 3, conserved site DM55_RS14885 IPR001320 Ionotropic glutamate receptor DM55_RS14900 IPR035906 MetI-like superfamily DM55_RS14900 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DM55_RS14900 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS14905 IPR035906 MetI-like superfamily DM55_RS14905 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS14905 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain DM55_RS14910 IPR011055 Duplicated hybrid motif DM55_RS14910 IPR018392 LysM domain DM55_RS14910 IPR013731 Opacity-associated protein A, N-terminal DM55_RS14910 IPR016047 Peptidase M23 DM55_RS14915 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DM55_RS14915 IPR009057 Homeobox-like domain superfamily DM55_RS14915 IPR013572 Transcription regulator MAATS, C-terminal DM55_RS14915 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DM55_RS14915 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS14920 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DM55_RS14920 IPR006143 RND efflux pump, membrane fusion protein DM55_RS14925 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DM55_RS14925 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DM55_RS14925 IPR001036 Acriflavin resistance protein DM55_RS14930 IPR013783 Immunoglobulin-like fold DM55_RS14930 IPR008962 PapD-like superfamily DM55_RS14930 IPR036316 Pili assembly chaperone, C-terminal domain superfamily DM55_RS14930 IPR001829 Pili assembly chaperone, bacterial DM55_RS14930 IPR016148 Pili assembly chaperone, C-terminal DM55_RS14930 IPR018046 Pili assembly chaperone, conserved site DM55_RS14930 IPR016147 Pili assembly chaperone, N-terminal DM55_RS14940 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DM55_RS14940 IPR003593 AAA+ ATPase domain DM55_RS14940 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS14940 IPR003439 ABC transporter-like DM55_RS14940 IPR007037 Siderophore-interacting protein, C-terminal domain DM55_RS14940 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS14940 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14940 IPR017871 ABC transporter, conserved site DM55_RS14940 IPR013113 FAD-binding 9, siderophore-interacting DM55_RS14940 IPR017927 FAD-binding domain, ferredoxin reductase-type DM55_RS14940 IPR036640 ABC transporter type 1, transmembrane domain superfamily DM55_RS14950 IPR002514 Transposase IS3/IS911family DM55_RS14950 IPR009057 Homeobox-like domain superfamily DM55_RS14975 IPR028082 Periplasmic binding protein-like I DM55_RS14975 IPR025997 Periplasmic binding protein DM55_RS14980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14980 IPR015861 ABC transporter, ribose import, RbsA DM55_RS14980 IPR017871 ABC transporter, conserved site DM55_RS14980 IPR003439 ABC transporter-like DM55_RS14980 IPR003593 AAA+ ATPase domain DM55_RS14985 IPR001851 ABC transporter, permease DM55_RS14990 IPR013154 Alcohol dehydrogenase, N-terminal DM55_RS14990 IPR011032 GroES-like superfamily DM55_RS14990 IPR036291 NAD(P)-binding domain superfamily DM55_RS14990 IPR020843 Polyketide synthase, enoylreductase domain DM55_RS14990 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS14995 IPR006000 Xylulokinase DM55_RS14995 IPR018484 Carbohydrate kinase, FGGY, N-terminal DM55_RS14995 IPR018483 Carbohydrate kinase, FGGY, conserved site DM55_RS14995 IPR018485 Carbohydrate kinase, FGGY, C-terminal DM55_RS14995 IPR000577 Carbohydrate kinase, FGGY DM55_RS15000 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS15000 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS15000 IPR036291 NAD(P)-binding domain superfamily DM55_RS15015 IPR005153 MbtH-like domain DM55_RS15015 IPR038020 MbtH-like domain superfamily DM55_RS15015 IPR037407 MbtH-like protein DM55_RS15020 IPR003819 TauD/TfdA-like domain DM55_RS15020 IPR042098 Taurine dioxygenase TauD-like superfamily DM55_RS15025 IPR003439 ABC transporter-like DM55_RS15025 IPR017871 ABC transporter, conserved site DM55_RS15025 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15025 IPR003593 AAA+ ATPase domain DM55_RS15030 IPR037294 ABC transporter, BtuC-like DM55_RS15030 IPR000522 ABC transporter, permease protein, BtuC-like DM55_RS15040 IPR002491 ABC transporter periplasmic binding domain DM55_RS15050 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS15050 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15050 IPR017871 ABC transporter, conserved site DM55_RS15050 IPR003439 ABC transporter-like DM55_RS15050 IPR003593 AAA+ ATPase domain DM55_RS15050 IPR036640 ABC transporter type 1, transmembrane domain superfamily DM55_RS15050 IPR005898 Cyclic peptide transporter DM55_RS15055 IPR010071 Amino acid adenylation domain DM55_RS15055 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DM55_RS15055 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS15055 IPR036736 ACP-like superfamily DM55_RS15055 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS15055 IPR001242 Condensation domain DM55_RS15055 IPR010060 Non-ribosomal peptide synthase DM55_RS15055 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS15055 IPR009081 Phosphopantetheine binding ACP domain DM55_RS15055 IPR006162 Phosphopantetheine attachment site DM55_RS15055 IPR000873 AMP-dependent synthetase/ligase DM55_RS15055 IPR020845 AMP-binding, conserved site DM55_RS15060 IPR001242 Condensation domain DM55_RS15060 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DM55_RS15060 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS15060 IPR020845 AMP-binding, conserved site DM55_RS15060 IPR000873 AMP-dependent synthetase/ligase DM55_RS15060 IPR006162 Phosphopantetheine attachment site DM55_RS15060 IPR009081 Phosphopantetheine binding ACP domain DM55_RS15060 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS15060 IPR010060 Non-ribosomal peptide synthase DM55_RS15060 IPR010071 Amino acid adenylation domain DM55_RS15060 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS15060 IPR036736 ACP-like superfamily DM55_RS15065 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase DM55_RS15065 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS15070 IPR037066 TonB-dependent receptor, plug domain superfamily DM55_RS15070 IPR010916 TonB box, conserved site DM55_RS15070 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily DM55_RS15070 IPR010105 TonB-dependent siderophore receptor DM55_RS15070 IPR039423 TonB-dependent receptor-like DM55_RS15070 IPR012910 TonB-dependent receptor, plug domain DM55_RS15070 IPR000531 TonB-dependent receptor-like, beta-barrel DM55_RS15075 IPR004607 Phosphoribosylglycinamide formyltransferase DM55_RS15075 IPR002376 Formyl transferase, N-terminal DM55_RS15075 IPR036477 Formyl transferase, N-terminal domain superfamily DM55_RS15085 IPR029062 Class I glutamine amidotransferase-like DM55_RS15085 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15085 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA DM55_RS15085 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DM55_RS15085 IPR011698 CobB/CobQ-like glutamine amidotransferase DM55_RS15085 IPR017929 CobB/CobQ glutamine amidotransferase DM55_RS15090 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain DM55_RS15090 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR DM55_RS15090 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15095 IPR036518 CobE/GbiG C-terminal domain superfamily DM55_RS15095 IPR002750 CobE/GbiG C-terminal domain DM55_RS15100 IPR011541 Nickel/cobalt transporter, high-affinity DM55_RS15100 IPR004688 Transition metal uptake transporter nickel/cobalt DM55_RS15105 IPR036627 CobW-like, C-terminal domain superfamily DM55_RS15105 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DM55_RS15105 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DM55_RS15105 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15105 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW DM55_RS15110 IPR011953 Cobaltochelatase, CobN subunit DM55_RS15110 IPR003672 CobN/magnesium chelatase DM55_RS15120 IPR011704 ATPase, dynein-related, AAA domain DM55_RS15120 IPR036465 von Willebrand factor A-like domain superfamily DM55_RS15120 IPR041702 Magnesium-chelatase BchD/ChlD, VWA domain DM55_RS15120 IPR003593 AAA+ ATPase domain DM55_RS15120 IPR041628 ChlI/MoxR, AAA lid domain DM55_RS15120 IPR002035 von Willebrand factor, type A DM55_RS15120 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15130 IPR029058 Alpha/Beta hydrolase fold DM55_RS15130 IPR003140 Phospholipase/carboxylesterase/thioesterase DM55_RS15140 IPR036573 Carbohydrate-binding module superfamily 5/12 DM55_RS15140 IPR017853 Glycoside hydrolase superfamily DM55_RS15140 IPR003610 Carbohydrate-binding module family 5/12 DM55_RS15145 IPR006363 Precorrin-3B C17-methyltransferase domain DM55_RS15145 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS15145 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS15145 IPR035996 Tetrapyrrole methylase superfamily DM55_RS15145 IPR000878 Tetrapyrrole methylase DM55_RS15150 IPR035996 Tetrapyrrole methylase superfamily DM55_RS15150 IPR000878 Tetrapyrrole methylase DM55_RS15150 IPR012382 Precorrin-2 C(20)-methyltransferase DM55_RS15150 IPR006364 Precorrin-2 C(20)-methyltransferase domain DM55_RS15150 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS15150 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS15155 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC DM55_RS15155 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily DM55_RS15160 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DM55_RS15160 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily DM55_RS15160 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DM55_RS15160 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like DM55_RS15160 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site DM55_RS15165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS15165 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase DM55_RS15165 IPR000878 Tetrapyrrole methylase DM55_RS15165 IPR035996 Tetrapyrrole methylase superfamily DM55_RS15165 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit DM55_RS15165 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS15165 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase DM55_RS15170 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD DM55_RS15170 IPR036074 CbiD superfamily DM55_RS15175 IPR003723 Precorrin-6x reductase DM55_RS15185 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase DM55_RS15185 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS15185 IPR000878 Tetrapyrrole methylase DM55_RS15185 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DM55_RS15185 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS15185 IPR035996 Tetrapyrrole methylase superfamily DM55_RS15190 IPR003790 Glycosyl hydrolase-like 10 DM55_RS15190 IPR013785 Aldolase-type TIM barrel DM55_RS15190 IPR013783 Immunoglobulin-like fold DM55_RS15190 IPR017853 Glycoside hydrolase superfamily DM55_RS15195 IPR011701 Major facilitator superfamily DM55_RS15195 IPR004747 Cyanate transport system protein DM55_RS15195 IPR036259 MFS transporter superfamily DM55_RS15195 IPR020846 Major facilitator superfamily domain DM55_RS15200 IPR023187 Transcriptional regulator MarR-type, conserved site DM55_RS15200 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS15200 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS15200 IPR000835 MarR-type HTH domain DM55_RS15205 IPR000709 Leu/Ile/Val-binding protein DM55_RS15205 IPR028081 Leucine-binding protein domain DM55_RS15205 IPR028082 Periplasmic binding protein-like I DM55_RS15215 IPR036249 Thioredoxin-like superfamily DM55_RS15215 IPR004046 Glutathione S-transferase, C-terminal DM55_RS15215 IPR004045 Glutathione S-transferase, N-terminal DM55_RS15215 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS15215 IPR036282 Glutathione S-transferase, C-terminal domain superfamily DM55_RS15225 IPR005119 LysR, substrate-binding DM55_RS15225 IPR000847 Transcription regulator HTH, LysR DM55_RS15225 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS15225 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS15230 IPR038084 GlcG-like domain superfamily DM55_RS15230 IPR005624 Haem-degrading DM55_RS15235 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS15235 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS15235 IPR036291 NAD(P)-binding domain superfamily DM55_RS15235 IPR029058 Alpha/Beta hydrolase fold DM55_RS15235 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS15240 IPR036393 Acetylglutamate kinase-like superfamily DM55_RS15240 IPR003964 Carbamate kinase DM55_RS15240 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS15245 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DM55_RS15245 IPR002292 Ornithine/putrescine carbamoyltransferase DM55_RS15245 IPR006130 Aspartate/ornithine carbamoyltransferase DM55_RS15245 IPR024904 Ornithine carbamoyltransferase DM55_RS15245 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DM55_RS15245 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily DM55_RS15250 IPR003876 Arginine deiminase DM55_RS15255 IPR022461 Arginine/ornithine antiporter DM55_RS15255 IPR004754 Amino acid antiporter DM55_RS15255 IPR002293 Amino acid/polyamine transporter I DM55_RS15265 IPR035906 MetI-like superfamily DM55_RS15265 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS15270 IPR003439 ABC transporter-like DM55_RS15270 IPR003593 AAA+ ATPase domain DM55_RS15270 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15270 IPR017871 ABC transporter, conserved site DM55_RS15275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS15275 IPR035906 MetI-like superfamily DM55_RS15280 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain DM55_RS15285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS15285 IPR041698 Methyltransferase domain 25 DM55_RS15285 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DM55_RS15290 IPR004638 Drug resistance transporter EmrB-like DM55_RS15290 IPR011701 Major facilitator superfamily DM55_RS15290 IPR020846 Major facilitator superfamily domain DM55_RS15290 IPR036259 MFS transporter superfamily DM55_RS15295 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS15295 IPR000873 AMP-dependent synthetase/ligase DM55_RS15295 IPR020845 AMP-binding, conserved site DM55_RS15295 IPR020459 AMP-binding DM55_RS15295 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS15310 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DM55_RS15310 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS15310 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS15310 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DM55_RS15310 IPR003660 HAMP domain DM55_RS15310 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DM55_RS15315 IPR002545 CheW-like domain DM55_RS15315 IPR036061 CheW-like domain superfamily DM55_RS15315 IPR039315 Chemotaxis protein CheW DM55_RS15325 IPR011051 RmlC-like cupin domain superfamily DM55_RS15325 IPR020449 Transcription regulator HTH, AraC- type DM55_RS15325 IPR018060 DNA binding HTH domain, AraC-type DM55_RS15325 IPR032783 AraC-type transcription regulator, ligand-binding domain DM55_RS15325 IPR009057 Homeobox-like domain superfamily DM55_RS15330 IPR023614 Porin domain superfamily DM55_RS15330 IPR033900 Porin domain, Gram-negative type DM55_RS15330 IPR002299 Porin, Neisseria sp. type DM55_RS15330 IPR001702 Porin, Gram-negative type DM55_RS15350 IPR038020 MbtH-like domain superfamily DM55_RS15350 IPR005153 MbtH-like domain DM55_RS15350 IPR037407 MbtH-like protein DM55_RS15365 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DM55_RS15365 IPR005861 Histidinol-phosphate aminotransferase family DM55_RS15365 IPR004839 Aminotransferase, class I/classII DM55_RS15365 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS15365 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS15365 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS15370 IPR012337 Ribonuclease H-like superfamily DM55_RS15370 IPR001584 Integrase, catalytic core DM55_RS15370 IPR036397 Ribonuclease H superfamily DM55_RS15370 IPR025948 HTH-like domain DM55_RS15375 IPR038965 Transposase InsF-like DM55_RS15375 IPR001584 Integrase, catalytic core DM55_RS15375 IPR012337 Ribonuclease H-like superfamily DM55_RS15375 IPR036397 Ribonuclease H superfamily DM55_RS15380 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase DM55_RS15380 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS15380 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS15385 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS15385 IPR036291 NAD(P)-binding domain superfamily DM55_RS15385 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS15410 IPR004165 Coenzyme A transferase family I DM55_RS15410 IPR012792 3-oxoacid CoA-transferase, subunit A DM55_RS15410 IPR037171 NagB/RpiA transferase-like DM55_RS15410 IPR004163 Coenzyme A transferase binding site DM55_RS15415 IPR012791 3-oxoacid CoA-transferase, subunit B DM55_RS15415 IPR004165 Coenzyme A transferase family I DM55_RS15415 IPR037171 NagB/RpiA transferase-like DM55_RS15415 IPR004164 Coenzyme A transferase active site DM55_RS15420 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS15420 IPR036291 NAD(P)-binding domain superfamily DM55_RS15435 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS15435 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS15435 IPR000847 Transcription regulator HTH, LysR DM55_RS15435 IPR005119 LysR, substrate-binding DM55_RS15445 IPR019913 Pyrimidine utilisation protein RutD DM55_RS15445 IPR022742 Serine aminopeptidase, S33 DM55_RS15445 IPR029058 Alpha/Beta hydrolase fold DM55_RS15445 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS15450 IPR006175 YjgF/YER057c/UK114 family DM55_RS15450 IPR035959 RutC-like superfamily DM55_RS15450 IPR019897 RidA, conserved site DM55_RS15450 IPR035709 RutC family, YoaB-like DM55_RS15455 IPR012675 Beta-grasp domain superfamily DM55_RS15455 IPR004811 RelA/SpoT family DM55_RS15455 IPR033655 RelA, TGS domain DM55_RS15455 IPR003607 HD/PDEase domain DM55_RS15455 IPR004095 TGS DM55_RS15455 IPR012676 TGS-like DM55_RS15455 IPR002912 ACT domain DM55_RS15455 IPR007685 RelA/SpoT DM55_RS15465 IPR004154 Anticodon-binding DM55_RS15465 IPR033728 Threonine-tRNA ligase catalytic core domain DM55_RS15465 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) DM55_RS15465 IPR006195 Aminoacyl-tRNA synthetase, class II DM55_RS15465 IPR036621 Anticodon-binding domain superfamily DM55_RS15465 IPR012675 Beta-grasp domain superfamily DM55_RS15465 IPR002320 Threonine-tRNA ligase, class IIa DM55_RS15465 IPR012676 TGS-like DM55_RS15465 IPR004095 TGS DM55_RS15465 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DM55_RS15465 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily DM55_RS15470 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily DM55_RS15470 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily DM55_RS15470 IPR019813 Translation initiation factor 3, conserved site DM55_RS15470 IPR001288 Translation initiation factor 3 DM55_RS15470 IPR019815 Translation initiation factor 3, C-terminal DM55_RS15470 IPR019814 Translation initiation factor 3, N-terminal DM55_RS15475 IPR018265 Ribosomal protein L35, conserved site DM55_RS15475 IPR001706 Ribosomal protein L35, non-mitochondrial DM55_RS15475 IPR037229 Ribosomal protein L35 superfamily DM55_RS15475 IPR021137 Ribosomal protein L35 DM55_RS15480 IPR005813 Ribosomal protein L20 DM55_RS15480 IPR035566 Ribosomal protein L20, C-terminal DM55_RS15485 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial DM55_RS15485 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm DM55_RS15485 IPR002319 Phenylalanyl-tRNA synthetase DM55_RS15485 IPR006195 Aminoacyl-tRNA synthetase, class II DM55_RS15485 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit DM55_RS15485 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal DM55_RS15490 IPR005146 B3/B4 tRNA-binding domain DM55_RS15490 IPR002547 tRNA-binding domain DM55_RS15490 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain DM55_RS15490 IPR012340 Nucleic acid-binding, OB-fold DM55_RS15490 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit DM55_RS15490 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 DM55_RS15490 IPR005147 tRNA synthetase, B5-domain DM55_RS15490 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain DM55_RS15490 IPR005121 Ferrodoxin-fold anticodon-binding domain DM55_RS15490 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily DM55_RS15490 IPR009061 Putative DNA-binding domain superfamily DM55_RS15495 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily DM55_RS15495 IPR020816 Histone-like DNA-binding protein, conserved site DM55_RS15495 IPR005684 Integration host factor, alpha subunit DM55_RS15495 IPR000119 Histone-like DNA-binding protein DM55_RS15525 IPR014524 Outer membrane protein assembly factor BamC DM55_RS15525 IPR010653 NlpB/DapX lipoprotein DM55_RS15525 IPR042268 Outer membrane protein assembly factor BamC, C-terminal DM55_RS15545 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS15545 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS15545 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS15585 IPR000847 Transcription regulator HTH, LysR DM55_RS15585 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS15585 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS15585 IPR005119 LysR, substrate-binding DM55_RS15590 IPR005234 Chromosome segregation/condensation protein ScpB DM55_RS15590 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS15590 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS15595 IPR006145 Pseudouridine synthase, RsuA/RluA DM55_RS15595 IPR036986 RNA-binding S4 domain superfamily DM55_RS15595 IPR002942 RNA-binding S4 domain DM55_RS15595 IPR020103 Pseudouridine synthase, catalytic domain superfamily DM55_RS15595 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DM55_RS15595 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DM55_RS15600 IPR003728 Ribosome maturation factor RimP DM55_RS15600 IPR035956 RimP, N-terminal domain superfamily DM55_RS15600 IPR028989 Ribosome maturation factor RimP, N-terminal DM55_RS15600 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DM55_RS15600 IPR028998 Ribosome maturation factor RimP, C-terminal DM55_RS15605 IPR036555 NusA, N-terminal domain superfamily DM55_RS15605 IPR030842 Transcription termination/antitermination protein NusA, bacterial DM55_RS15605 IPR004087 K Homology domain DM55_RS15605 IPR003029 S1 domain DM55_RS15605 IPR013735 Transcription factor NusA, N-terminal DM55_RS15605 IPR012340 Nucleic acid-binding, OB-fold DM55_RS15605 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical DM55_RS15605 IPR015946 K homology domain-like, alpha/beta DM55_RS15605 IPR022967 RNA-binding domain, S1 DM55_RS15605 IPR025249 KH domain, NusA-like DM55_RS15605 IPR010213 Transcription termination factor NusA DM55_RS15605 IPR010214 Transcription termination factor NusA, C-terminal duplication DM55_RS15605 IPR009019 K homology domain superfamily, prokaryotic type DM55_RS15610 IPR000178 Translation initiation factor aIF-2, bacterial-like DM55_RS15610 IPR000795 Transcription factor, GTP-binding domain DM55_RS15610 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15610 IPR015760 Translation initiation factor IF- 2 DM55_RS15610 IPR009061 Putative DNA-binding domain superfamily DM55_RS15610 IPR013575 Initiation factor 2 associated domain, bacterial DM55_RS15610 IPR006847 Translation initiation factor IF-2, N-terminal DM55_RS15610 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS15610 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DM55_RS15610 IPR005225 Small GTP-binding protein domain DM55_RS15610 IPR023115 Translation initiation factor IF- 2, domain 3 DM55_RS15615 IPR023799 Ribosome-binding factor A domain superfamily DM55_RS15615 IPR000238 Ribosome-binding factor A DM55_RS15615 IPR015946 K homology domain-like, alpha/beta DM55_RS15620 IPR032819 tRNA pseudouridylate synthase B, C-terminal DM55_RS15620 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal DM55_RS15620 IPR036974 PUA domain superfamily DM55_RS15620 IPR015947 PUA-like superfamily DM55_RS15620 IPR002501 Pseudouridine synthase II, N-terminal DM55_RS15620 IPR020103 Pseudouridine synthase, catalytic domain superfamily DM55_RS15620 IPR014780 tRNA pseudouridine synthase II, TruB DM55_RS15625 IPR011701 Major facilitator superfamily DM55_RS15625 IPR004638 Drug resistance transporter EmrB-like DM55_RS15625 IPR020846 Major facilitator superfamily domain DM55_RS15625 IPR036259 MFS transporter superfamily DM55_RS15630 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DM55_RS15630 IPR005694 Efflux pump membrane protein DM55_RS15635 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DM55_RS15635 IPR003423 Outer membrane efflux protein DM55_RS15640 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS15640 IPR000835 MarR-type HTH domain DM55_RS15640 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS15645 IPR004161 Translation elongation factor EFTu-like, domain 2 DM55_RS15645 IPR006298 GTP-binding protein TypA DM55_RS15645 IPR000640 Elongation factor EFG, domain V-like DM55_RS15645 IPR035647 EF-G domain III/V-like DM55_RS15645 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15645 IPR035651 BipA, domain V DM55_RS15645 IPR005225 Small GTP-binding protein domain DM55_RS15645 IPR031157 Tr-type G domain, conserved site DM55_RS15645 IPR042116 GTP-binding protein TypA/BipA, C-terminal DM55_RS15645 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS15645 IPR000795 Transcription factor, GTP-binding domain DM55_RS15650 IPR029061 Thiamin diphosphate-binding fold DM55_RS15650 IPR011603 2-oxoglutarate dehydrogenase E1 component DM55_RS15650 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal DM55_RS15650 IPR001017 Dehydrogenase, E1 component DM55_RS15650 IPR005475 Transketolase-like, pyrimidine-binding domain DM55_RS15650 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain DM55_RS15650 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily DM55_RS15655 IPR006255 Dihydrolipoamide succinyltransferase DM55_RS15655 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DM55_RS15655 IPR004167 Peripheral subunit-binding domain DM55_RS15655 IPR036625 E3-binding domain superfamily DM55_RS15655 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DM55_RS15655 IPR000089 Biotin/lipoyl attachment DM55_RS15655 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DM55_RS15655 IPR011053 Single hybrid motif DM55_RS15660 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS15660 IPR023753 FAD/NAD(P)-binding domain DM55_RS15660 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DM55_RS15660 IPR006258 Dihydrolipoamide dehydrogenase DM55_RS15660 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I DM55_RS15660 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM55_RS15660 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DM55_RS15665 IPR030870 Cell division protein ZapE DM55_RS15665 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15665 IPR005654 ATPase, AFG1-like DM55_RS15695 IPR025948 HTH-like domain DM55_RS15695 IPR001584 Integrase, catalytic core DM55_RS15695 IPR036397 Ribonuclease H superfamily DM55_RS15695 IPR012337 Ribonuclease H-like superfamily DM55_RS15700 IPR002514 Transposase IS3/IS911family DM55_RS15700 IPR009057 Homeobox-like domain superfamily DM55_RS15705 IPR038152 Carbamoyltransferase, C-terminal domain superfamily DM55_RS15705 IPR003696 Carbamoyltransferase DM55_RS15705 IPR031730 Carbamoyltransferase, C-terminal DM55_RS15710 IPR023343 Penicillin amidase type, domain 1 DM55_RS15710 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS15710 IPR014395 Penicillin/GL-7-ACA/AHL acylase DM55_RS15710 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase DM55_RS15720 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase DM55_RS15720 IPR000683 Oxidoreductase, N-terminal DM55_RS15720 IPR036291 NAD(P)-binding domain superfamily DM55_RS15720 IPR004104 Oxidoreductase, C-terminal DM55_RS15725 IPR011711 GntR, C-terminal DM55_RS15725 IPR008920 Transcription regulator FadR/GntR, C-terminal DM55_RS15725 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS15725 IPR000524 Transcription regulator HTH, GntR DM55_RS15725 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS15730 IPR036397 Ribonuclease H superfamily DM55_RS15730 IPR001584 Integrase, catalytic core DM55_RS15730 IPR012337 Ribonuclease H-like superfamily DM55_RS15730 IPR025948 HTH-like domain DM55_RS15735 IPR002514 Transposase IS3/IS911family DM55_RS15735 IPR009057 Homeobox-like domain superfamily DM55_RS15740 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup DM55_RS15740 IPR004788 Ribose 5-phosphate isomerase, type A DM55_RS15740 IPR037171 NagB/RpiA transferase-like DM55_RS15745 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily DM55_RS15745 IPR036366 PGBD superfamily DM55_RS15745 IPR036365 PGBD-like superfamily DM55_RS15745 IPR002502 N-acetylmuramoyl-L-alanine amidase domain DM55_RS15755 IPR001537 tRNA/rRNA methyltransferase, SpoU type DM55_RS15755 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DM55_RS15755 IPR004441 RNA methyltransferase TrmH family DM55_RS15755 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS15755 IPR029028 Alpha/beta knot methyltransferases DM55_RS15755 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB DM55_RS15755 IPR029064 50S ribosomal protein L30e-like DM55_RS15760 IPR013668 Ribonuclease R winged-helix domain DM55_RS15760 IPR003029 S1 domain DM55_RS15760 IPR011805 Ribonuclease R DM55_RS15760 IPR004476 Ribonuclease II/ribonuclease R DM55_RS15760 IPR022966 Ribonuclease II/R, conserved site DM55_RS15760 IPR001900 Ribonuclease II/R DM55_RS15760 IPR013223 Ribonuclease B, N-terminal OB domain DM55_RS15760 IPR012340 Nucleic acid-binding, OB-fold DM55_RS15760 IPR040476 RNase II/RNase R, cold shock domain DM55_RS15760 IPR022967 RNA-binding domain, S1 DM55_RS15760 IPR011129 Cold shock domain DM55_RS15780 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding DM55_RS15780 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily DM55_RS15780 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS15780 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site DM55_RS15780 IPR003660 HAMP domain DM55_RS15780 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS15785 IPR017850 Alkaline-phosphatase-like, core domain superfamily DM55_RS15785 IPR007312 Phosphoesterase DM55_RS15785 IPR006311 Twin-arginine translocation pathway, signal sequence DM55_RS15795 IPR001902 SLC26A/SulP transporter DM55_RS15795 IPR036513 STAS domain superfamily DM55_RS15795 IPR002645 STAS domain DM55_RS15795 IPR011547 SLC26A/SulP transporter domain DM55_RS15805 IPR000182 GNAT domain DM55_RS15805 IPR025777 GMP synthetase ATP pyrophosphatase domain DM55_RS15805 IPR001674 GMP synthase, C-terminal DM55_RS15805 IPR017926 Glutamine amidotransferase DM55_RS15805 IPR011257 DNA glycosylase DM55_RS15805 IPR029062 Class I glutamine amidotransferase-like DM55_RS15805 IPR016181 Acyl-CoA N-acyltransferase DM55_RS15805 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS15805 IPR005019 Methyladenine glycosylase DM55_RS15815 IPR036259 MFS transporter superfamily DM55_RS15815 IPR020846 Major facilitator superfamily domain DM55_RS15815 IPR011701 Major facilitator superfamily DM55_RS15820 IPR009057 Homeobox-like domain superfamily DM55_RS15820 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DM55_RS15820 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS15825 IPR020845 AMP-binding, conserved site DM55_RS15825 IPR000873 AMP-dependent synthetase/ligase DM55_RS15825 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS15825 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS15840 IPR005001 RNA-binding protein Hfq DM55_RS15840 IPR010920 LSM domain superfamily DM55_RS15850 IPR003593 AAA+ ATPase domain DM55_RS15850 IPR011006 CheY-like superfamily DM55_RS15850 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS15850 IPR002197 DNA binding HTH domain, Fis-type DM55_RS15850 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS15850 IPR001789 Signal transduction response regulator, receiver domain DM55_RS15850 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DM55_RS15850 IPR009057 Homeobox-like domain superfamily DM55_RS15850 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15850 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS15890 IPR014004 Transport-associated and nodulation domain, bacteria DM55_RS15890 IPR004846 Type II/III secretion system DM55_RS15890 IPR007055 BON domain DM55_RS15890 IPR001775 GspD/PilQ family DM55_RS15890 IPR032789 Pilus formation protein, N-terminal DM55_RS15915 IPR036397 Ribonuclease H superfamily DM55_RS15915 IPR025948 HTH-like domain DM55_RS15915 IPR001584 Integrase, catalytic core DM55_RS15915 IPR012337 Ribonuclease H-like superfamily DM55_RS15920 IPR002514 Transposase IS3/IS911family DM55_RS15920 IPR009057 Homeobox-like domain superfamily DM55_RS15930 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS15930 IPR035906 MetI-like superfamily DM55_RS15935 IPR035906 MetI-like superfamily DM55_RS15935 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS15940 IPR017871 ABC transporter, conserved site DM55_RS15940 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS15940 IPR003439 ABC transporter-like DM55_RS15940 IPR013611 Transport-associated OB, type 2 DM55_RS15940 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit DM55_RS15940 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15940 IPR003593 AAA+ ATPase domain DM55_RS15945 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein DM55_RS15945 IPR006059 Bacterial extracellular solute-binding protein DM55_RS15950 IPR001046 NRAMP family DM55_RS15960 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel DM55_RS15960 IPR005618 Outer membrane protein, OmpW DM55_RS15965 IPR013785 Aldolase-type TIM barrel DM55_RS15965 IPR004136 Nitronate monooxygenase DM55_RS15970 IPR015590 Aldehyde dehydrogenase domain DM55_RS15970 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS15970 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS15970 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS15970 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS15980 IPR032781 ABC-transporter extension domain DM55_RS15980 IPR003439 ABC transporter-like DM55_RS15980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15980 IPR003593 AAA+ ATPase domain DM55_RS15985 IPR007844 AsmA DM55_RS15990 IPR003439 ABC transporter-like DM55_RS15990 IPR017871 ABC transporter, conserved site DM55_RS15990 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15990 IPR003593 AAA+ ATPase domain DM55_RS15995 IPR005226 UPF0014 family DM55_RS16005 IPR023214 HAD superfamily DM55_RS16005 IPR036412 HAD-like superfamily DM55_RS16010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS16010 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS16010 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS16010 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme DM55_RS16010 IPR006233 Cystathionine beta-lyase, bacterial DM55_RS16020 IPR020617 Thiolase, C-terminal DM55_RS16020 IPR020610 Thiolase, active site DM55_RS16020 IPR020615 Thiolase, acyl-enzyme intermediate active site DM55_RS16020 IPR020616 Thiolase, N-terminal DM55_RS16020 IPR016039 Thiolase-like DM55_RS16020 IPR002155 Thiolase DM55_RS16025 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DM55_RS16025 IPR011611 Carbohydrate kinase PfkB DM55_RS16025 IPR002139 Ribokinase/fructokinase DM55_RS16025 IPR029056 Ribokinase-like DM55_RS16030 IPR023404 Radical SAM, alpha/beta horseshoe DM55_RS16030 IPR041582 RimO, TRAM domain DM55_RS16030 IPR007197 Radical SAM DM55_RS16030 IPR005839 Methylthiotransferase DM55_RS16030 IPR020612 Methylthiotransferase, conserved site DM55_RS16030 IPR005840 Ribosomal protein S12 methylthiotransferase RimO DM55_RS16030 IPR006638 Elp3/MiaB/NifB DM55_RS16030 IPR038135 Methylthiotransferase, N-terminal domain superfamily DM55_RS16030 IPR013848 Methylthiotransferase, N-terminal DM55_RS16030 IPR002792 TRAM domain DM55_RS16035 IPR007897 PHB accumulation regulatory DM55_RS16035 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR DM55_RS16035 IPR012909 PHA accumulation regulator DNA-binding, N-terminal DM55_RS16040 IPR036291 NAD(P)-binding domain superfamily DM55_RS16040 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS16040 IPR011283 Acetoacetyl-CoA reductase DM55_RS16040 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS16045 IPR020616 Thiolase, N-terminal DM55_RS16045 IPR016039 Thiolase-like DM55_RS16045 IPR002155 Thiolase DM55_RS16045 IPR020617 Thiolase, C-terminal DM55_RS16045 IPR020610 Thiolase, active site DM55_RS16045 IPR020613 Thiolase, conserved site DM55_RS16045 IPR020615 Thiolase, acyl-enzyme intermediate active site DM55_RS16050 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain DM55_RS16050 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I DM55_RS16050 IPR029058 Alpha/Beta hydrolase fold DM55_RS16055 IPR038371 Multi-copper polyphenol oxidoreductase superfamily DM55_RS16055 IPR003730 Multi-copper polyphenol oxidoreductase DM55_RS16055 IPR011324 Cytotoxic necrotizing factor-like, catalytic DM55_RS16060 IPR036986 RNA-binding S4 domain superfamily DM55_RS16060 IPR006145 Pseudouridine synthase, RsuA/RluA DM55_RS16060 IPR020103 Pseudouridine synthase, catalytic domain superfamily DM55_RS16060 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DM55_RS16060 IPR002942 RNA-binding S4 domain DM55_RS16060 IPR006225 Pseudouridine synthase, RluC/RluD DM55_RS16065 IPR011990 Tetratricopeptide-like helical domain superfamily DM55_RS16065 IPR039565 Outer membrane lipoprotein BamD-like DM55_RS16065 IPR017689 Outer membrane protein assembly factor BamD DM55_RS16070 IPR006935 Helicase/UvrB, N-terminal DM55_RS16070 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type DM55_RS16070 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16070 IPR006555 ATP-dependent helicase, C-terminal DM55_RS16070 IPR014001 Helicase superfamily 1/2, ATP-binding domain DM55_RS16085 IPR003029 S1 domain DM55_RS16085 IPR023323 Tex-like domain superfamily DM55_RS16085 IPR032639 Tex protein, YqgF-like domain DM55_RS16085 IPR018974 Tex-like protein, N-terminal DM55_RS16085 IPR006641 YqgF/RNase H-like domain DM55_RS16085 IPR037027 YqgF/RNase H-like domain superfamily DM55_RS16085 IPR010994 RuvA domain 2-like DM55_RS16085 IPR012337 Ribonuclease H-like superfamily DM55_RS16085 IPR012340 Nucleic acid-binding, OB-fold DM55_RS16085 IPR023319 Tex-like protein, HTH domain superfamily DM55_RS16085 IPR041692 HHH domain 9 DM55_RS16085 IPR022967 RNA-binding domain, S1 DM55_RS16090 IPR003855 Potassium transporter DM55_RS16090 IPR023051 Potassium uptake protein, low affinity, Kup DM55_RS16095 IPR000836 Phosphoribosyltransferase domain DM55_RS16095 IPR029057 Phosphoribosyltransferase-like DM55_RS16095 IPR023747 Xanthine-guanine phosphoribosyltransferase DM55_RS16100 IPR042109 Adenylosuccinate synthetase, domain 1 DM55_RS16100 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16100 IPR001114 Adenylosuccinate synthetase DM55_RS16100 IPR018220 Adenylosuccinate synthase, GTP-binding site DM55_RS16100 IPR042111 Adenylosuccinate synthetase, domain 3 DM55_RS16100 IPR042110 Adenylosuccinate synthetase, domain 2 DM55_RS16100 IPR033128 Adenylosuccinate synthase, active site DM55_RS16105 IPR004517 ATP phosphoribosyltransferase regulatory subunit DM55_RS16105 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain DM55_RS16105 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit DM55_RS16115 IPR001107 Band 7 domain DM55_RS16115 IPR036013 Band 7/SPFH domain superfamily DM55_RS16115 IPR010200 HflC DM55_RS16120 IPR001107 Band 7 domain DM55_RS16120 IPR001972 Stomatin family DM55_RS16120 IPR036013 Band 7/SPFH domain superfamily DM55_RS16120 IPR010201 HflK DM55_RS16120 IPR020980 Menbrane protein HflK, N-terminal DM55_RS16125 IPR016496 GTPase HflX DM55_RS16125 IPR042108 GTPase HflX, N-terminal domain superfamily DM55_RS16125 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16125 IPR032305 GTP-binding protein, middle domain DM55_RS16125 IPR035647 EF-G domain III/V-like DM55_RS16125 IPR030394 HflX-type guanine nucleotide-binding (G) domain DM55_RS16125 IPR006073 GTP binding domain DM55_RS16125 IPR025121 GTPase HflX, N-terminal DM55_RS16130 IPR005001 RNA-binding protein Hfq DM55_RS16130 IPR010920 LSM domain superfamily DM55_RS16135 IPR006073 GTP binding domain DM55_RS16135 IPR032859 GTPase Der, C-terminal KH-domain-like DM55_RS16135 IPR005225 Small GTP-binding protein domain DM55_RS16135 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16135 IPR015946 K homology domain-like, alpha/beta DM55_RS16135 IPR016484 GTP-binding protein EngA DM55_RS16135 IPR003593 AAA+ ATPase domain DM55_RS16135 IPR031166 EngA-type guanine nucleotide-binding (G) domain DM55_RS16140 IPR017687 Outer membrane protein assembly factor BamB DM55_RS16140 IPR002372 Pyrrolo-quinoline quinone repeat DM55_RS16140 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily DM55_RS16140 IPR015943 WD40/YVTN repeat-like-containing domain superfamily DM55_RS16140 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DM55_RS16145 IPR018704 Tetratricopeptide repeat-like domain DM55_RS16145 IPR026039 Uncharacterised protein family UPF0070 DM55_RS16145 IPR013026 Tetratricopeptide repeat-containing domain DM55_RS16145 IPR019734 Tetratricopeptide repeat DM55_RS16145 IPR011990 Tetratricopeptide-like helical domain superfamily DM55_RS16150 IPR004154 Anticodon-binding DM55_RS16150 IPR015807 Histidine-tRNA ligase DM55_RS16150 IPR006195 Aminoacyl-tRNA synthetase, class II DM55_RS16150 IPR036621 Anticodon-binding domain superfamily DM55_RS16150 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain DM55_RS16150 IPR033656 Histidyl-anticodon-binding DM55_RS16150 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit DM55_RS16155 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial DM55_RS16155 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type DM55_RS16155 IPR011005 Dihydropteroate synthase-like DM55_RS16165 IPR007197 Radical SAM DM55_RS16165 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr DM55_RS16165 IPR027492 Dual-specificity RNA methyltransferase RlmN DM55_RS16165 IPR040072 Methyltransferase (Class A) DM55_RS16165 IPR013785 Aldolase-type TIM barrel DM55_RS16170 IPR034907 Nucleoside diphosphate kinase-like domain DM55_RS16170 IPR036850 Nucleoside diphosphate kinase-like domain superfamily DM55_RS16170 IPR001564 Nucleoside diphosphate kinase DM55_RS16170 IPR023005 Nucleoside diphosphate kinase, active site DM55_RS16175 IPR006214 Bax inhibitor 1-related DM55_RS16180 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD DM55_RS16180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS16180 IPR002792 TRAM domain DM55_RS16180 IPR010280 (Uracil-5)-methyltransferase family DM55_RS16180 IPR012340 Nucleic acid-binding, OB-fold DM55_RS16180 IPR030391 RNA methyltransferase TrmA, conserved site DM55_RS16200 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS16200 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS16200 IPR007624 RNA polymerase sigma-70 region 3 DM55_RS16200 IPR007630 RNA polymerase sigma-70 region 4 DM55_RS16200 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS16200 IPR013324 RNA polymerase sigma factor, region 3/4-like DM55_RS16200 IPR012761 RNA polymerase sigma factor RpoS DM55_RS16200 IPR014284 RNA polymerase sigma-70 like domain DM55_RS16200 IPR000943 RNA polymerase sigma-70 DM55_RS16200 IPR009042 RNA polymerase sigma-70 region 1.2 DM55_RS16205 IPR011055 Duplicated hybrid motif DM55_RS16205 IPR016047 Peptidase M23 DM55_RS16205 IPR036779 LysM domain superfamily DM55_RS16205 IPR018392 LysM domain DM55_RS16210 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase DM55_RS16210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS16215 IPR030048 Survival protein SurE DM55_RS16215 IPR036523 SurE-like phosphatase/nucleotidase superfamily DM55_RS16215 IPR002828 Survival protein SurE-like phosphatase/nucleotidase DM55_RS16245 IPR003593 AAA+ ATPase domain DM55_RS16245 IPR001270 ClpA/B family DM55_RS16245 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV DM55_RS16245 IPR012763 DNA polymerase III, subunit gamma/ tau DM55_RS16245 IPR021029 DNA polymerase III, tau subunit, domain V DM55_RS16245 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16245 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily DM55_RS16245 IPR022754 DNA polymerase III, gamma subunit, domain III DM55_RS16245 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DM55_RS16300 IPR002528 Multi antimicrobial extrusion protein DM55_RS16445 IPR001238 DNA-binding, RecF DM55_RS16445 IPR003395 RecF/RecN/SMC, N-terminal DM55_RS16445 IPR018078 DNA-binding, RecF, conserved site DM55_RS16445 IPR042174 DNA-binding RecF, domain 2 DM55_RS16445 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16520 IPR029045 ClpP/crotonase-like domain superfamily DM55_RS16520 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily DM55_RS16520 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site DM55_RS16520 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS16520 IPR001753 Enoyl-CoA hydratase/isomerase DM55_RS16520 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS16520 IPR036291 NAD(P)-binding domain superfamily DM55_RS16520 IPR012799 Fatty oxidation complex, alpha subunit FadB DM55_RS16550 IPR017926 Glutamine amidotransferase DM55_RS16550 IPR010918 PurM-like, C-terminal domain DM55_RS16550 IPR036676 PurM-like, C-terminal domain superfamily DM55_RS16550 IPR036921 PurM-like, N-terminal domain superfamily DM55_RS16550 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily DM55_RS16550 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain DM55_RS16550 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal DM55_RS16550 IPR010073 Phosphoribosylformylglycinamidine synthase PurL DM55_RS16550 IPR029062 Class I glutamine amidotransferase-like DM55_RS16585 IPR035482 Phosphoglucose isomerase, SIS domain 2 DM55_RS16585 IPR001672 Phosphoglucose isomerase (PGI) DM55_RS16585 IPR035476 Phosphoglucose isomerase, SIS domain 1 DM55_RS16585 IPR018189 Phosphoglucose isomerase, conserved site DM55_RS16585 IPR023096 Phosphoglucose isomerase, C-terminal DM55_RS16715 IPR011866 Sulphate ABC transporter, permease protein CysW DM55_RS16715 IPR035906 MetI-like superfamily DM55_RS16715 IPR005667 Sulphate ABC transporter permease protein 2 DM55_RS16715 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS16720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like DM55_RS16720 IPR035906 MetI-like superfamily DM55_RS16720 IPR005667 Sulphate ABC transporter permease protein 2 DM55_RS16720 IPR011865 Sulphate ABC transporter, permease protein CysT DM55_RS16865 IPR014001 Helicase superfamily 1/2, ATP-binding domain DM55_RS16865 IPR036101 CarD-like/TRCF domain superfamily DM55_RS16865 IPR001650 Helicase, C-terminal DM55_RS16865 IPR011545 DEAD/DEAH box helicase domain DM55_RS16865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16865 IPR037235 TRCF-like, C-terminal domain DM55_RS16865 IPR005118 Transcription-repair-coupling factor, C-terminal domain DM55_RS16865 IPR041471 UvrB, interaction domain DM55_RS16865 IPR003711 CarD-like/TRCF domain DM55_RS16865 IPR004576 Transcription-repair coupling factor DM55_RS17085 IPR034746 POTRA domain DM55_RS17085 IPR023707 Outer membrane protein assembly factor BamA DM55_RS17085 IPR039910 Surface antigen D15-like DM55_RS17085 IPR010827 POTRA domain, BamA/TamA-like DM55_RS17085 IPR000184 Bacterial surface antigen (D15) DM55_RS17110 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid DM55_RS17110 IPR001865 Ribosomal protein S2 DM55_RS17110 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DM55_RS17110 IPR018130 Ribosomal protein S2, conserved site DM55_RS17115 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DM55_RS17115 IPR018130 Ribosomal protein S2, conserved site DM55_RS17115 IPR001865 Ribosomal protein S2 DM55_RS17115 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid DM55_RS17175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS17175 IPR003395 RecF/RecN/SMC, N-terminal DM55_RS17175 IPR024704 Structural maintenance of chromosomes protein DM55_RS17175 IPR010935 SMCs flexible hinge DM55_RS17175 IPR036277 SMCs flexible hinge superfamily DM55_RS17175 IPR011890 Structural maintenance of chromosomes protein, prokaryotic DM55_RS17190 IPR011004 Trimeric LpxA-like superfamily DM55_RS17190 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family DM55_RS17190 IPR001451 Hexapeptide repeat DM55_RS17190 IPR018357 Hexapeptide transferase, conserved site DM55_RS17190 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily DM55_RS17190 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 DM55_RS17420 IPR001714 Peptidase M24, methionine aminopeptidase DM55_RS17420 IPR036005 Creatinase/aminopeptidase-like DM55_RS17420 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DM55_RS17420 IPR000994 Peptidase M24 DM55_RS17535 IPR009081 Phosphopantetheine binding ACP domain DM55_RS17535 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS17535 IPR010060 Non-ribosomal peptide synthase DM55_RS17535 IPR001242 Condensation domain DM55_RS17535 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily DM55_RS17535 IPR006162 Phosphopantetheine attachment site DM55_RS17535 IPR042099 AMP-dependent synthetase-like superfamily DM55_RS17535 IPR010071 Amino acid adenylation domain DM55_RS17535 IPR036736 ACP-like superfamily DM55_RS17535 IPR025110 AMP-binding enzyme, C-terminal domain DM55_RS17535 IPR020845 AMP-binding, conserved site DM55_RS17535 IPR000873 AMP-dependent synthetase/ligase DM55_RS17590 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DM55_RS17590 IPR022831 Multidrug resistance protein MdtB DM55_RS17590 IPR001036 Acriflavin resistance protein DM55_RS17630 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS17630 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain DM55_RS17630 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain DM55_RS17730 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA DM55_RS17730 IPR002220 DapA-like DM55_RS17730 IPR020625 Schiff base-forming aldolase, active site DM55_RS17730 IPR013785 Aldolase-type TIM barrel DM55_RS17785 IPR029062 Class I glutamine amidotransferase-like DM55_RS17785 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS17785 IPR017456 CTP synthase, N-terminal DM55_RS17785 IPR017926 Glutamine amidotransferase DM55_RS17785 IPR033828 CTP synthase GATase domain DM55_RS17785 IPR004468 CTP synthase DM55_RS17980 IPR002606 Riboflavin kinase, bacterial DM55_RS17980 IPR023468 Riboflavin kinase DM55_RS17980 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic DM55_RS17980 IPR023465 Riboflavin kinase domain superfamily DM55_RS17980 IPR015864 FAD synthetase DM55_RS17980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS17995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS17995 IPR002300 Aminoacyl-tRNA synthetase, class Ia DM55_RS17995 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain DM55_RS17995 IPR002301 Isoleucine-tRNA ligase DM55_RS17995 IPR023585 Isoleucine-tRNA ligase, type 1 DM55_RS17995 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DM55_RS17995 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS17995 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding DM55_RS17995 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DM55_RS17995 IPR010663 Zinc finger, FPG/IleRS-type DM55_RS18215 IPR008271 Serine/threonine-protein kinase, active site DM55_RS18215 IPR000719 Protein kinase domain DM55_RS18215 IPR011009 Protein kinase-like domain superfamily DM55_RS18440 IPR003959 ATPase, AAA-type, core DM55_RS18440 IPR019489 Clp ATPase, C-terminal DM55_RS18440 IPR003593 AAA+ ATPase domain DM55_RS18440 IPR004491 Heat shock protein HslU DM55_RS18440 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS18555 IPR034184 Putative acyl-CoA dehydrogenase AidB DM55_RS18555 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS18555 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS18555 IPR041504 Adaptive response protein AidB, N-terminal DM55_RS18555 IPR006089 Acyl-CoA dehydrogenase, conserved site DM55_RS18555 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS18555 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS18700 IPR030678 Peptide/nickel binding protein, MppA-type DM55_RS18700 IPR000914 Solute-binding protein family 5 domain DM55_RS18700 IPR039424 Solute-binding protein family 5 DM55_RS18700 IPR023765 Solute-binding protein family 5, conserved site DM55_RS18775 IPR012006 tRNA nucleotidyltransferase, proteobacteria DM55_RS18775 IPR002646 Poly A polymerase, head domain DM55_RS18775 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain DM55_RS18775 IPR006674 HD domain DM55_RS18775 IPR003607 HD/PDEase domain DM55_RS18805 IPR025965 FlgD Ig-like domain DM55_RS18805 IPR025963 FlgD Tudor-like domain DM55_RS18805 IPR005648 Flagellar hook capping protein DM55_RS18865 IPR006043 Xanthine/uracil/vitamin C permease DM55_RS18865 IPR006042 Xanthine/uracil permease DM55_RS18865 IPR019918 Pyrimidine permease RutG, predicted DM55_RS19045 IPR038770 Sodium/solute symporter superfamily DM55_RS19045 IPR016833 Putative sodium bile acid cotransporter DM55_RS19185 IPR032466 Metal-dependent hydrolase DM55_RS19185 IPR002195 Dihydroorotase, conserved site DM55_RS19185 IPR004721 Dihydroorotase homodimeric type DM55_RS19185 IPR006680 Amidohydrolase-related DM55_RS19480 IPR011129 Cold shock domain DM55_RS19480 IPR012340 Nucleic acid-binding, OB-fold DM55_RS19480 IPR013223 Ribonuclease B, N-terminal OB domain DM55_RS19480 IPR011804 Ribonuclease II DM55_RS19480 IPR001900 Ribonuclease II/R DM55_RS19480 IPR022966 Ribonuclease II/R, conserved site DM55_RS19480 IPR004476 Ribonuclease II/ribonuclease R DM55_RS19480 IPR003029 S1 domain DM55_RS19560 IPR005144 ATP-cone domain DM55_RS19560 IPR039718 Ribonucleoside-diphosphate reductase large subunit DM55_RS19560 IPR013346 Ribonucleotide reductase, class I , alpha subunit DM55_RS19560 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal DM55_RS19560 IPR013509 Ribonucleotide reductase large subunit, N-terminal DM55_RS19560 IPR000788 Ribonucleotide reductase large subunit, C-terminal DM55_RS19580 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS19580 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily DM55_RS19580 IPR004780 Signal recognition particle protein DM55_RS19580 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily DM55_RS19580 IPR003593 AAA+ ATPase domain DM55_RS19580 IPR013822 Signal recognition particle SRP54, helical bundle DM55_RS19580 IPR022941 Signal recognition particle, SRP54 subunit DM55_RS19580 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DM55_RS19580 IPR004125 Signal recognition particle, SRP54 subunit, M-domain DM55_RS19660 IPR014018 SecA motor DEAD DM55_RS19660 IPR011115 SecA DEAD-like, N-terminal DM55_RS19660 IPR036266 SecA, Wing/Scaffold superfamily DM55_RS19660 IPR036670 SecA, preprotein cross-linking domain superfamily DM55_RS19660 IPR011116 SecA Wing/Scaffold DM55_RS19660 IPR020937 SecA conserved site DM55_RS19660 IPR004027 SEC-C motif DM55_RS19660 IPR011130 SecA, preprotein cross-linking domain DM55_RS19660 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS19660 IPR000185 Protein translocase subunit SecA DM55_RS19680 IPR036249 Thioredoxin-like superfamily DM55_RS19680 IPR013740 Redoxin DM55_RS19680 IPR037944 Peroxiredoxin-5-like DM55_RS19680 IPR013766 Thioredoxin domain DM55_RS19920 IPR036390 Winged helix DNA-binding domain superfamily DM55_RS19920 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS19920 IPR005119 LysR, substrate-binding DM55_RS19920 IPR000847 Transcription regulator HTH, LysR DM55_RS19940 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS19940 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS19940 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS19940 IPR006089 Acyl-CoA dehydrogenase, conserved site DM55_RS19940 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily DM55_RS19940 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily DM55_RS19940 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal DM55_RS19955 IPR036458 Sodium:dicarboxylate symporter superfamily DM55_RS19955 IPR001991 Sodium:dicarboxylate symporter DM55_RS19955 IPR018107 Sodium:dicarboxylate symporter, conserved site DM55_RS19955 IPR023954 C4-dicarboxylate transport protein DM55_RS20165 IPR010236 ISC system FeS cluster assembly, HscA chaperone DM55_RS20165 IPR013126 Heat shock protein 70 family DM55_RS20165 IPR042039 HscA chaperone, nucleotide-binding domain DM55_RS20165 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily DM55_RS20165 IPR018181 Heat shock protein 70, conserved site DM55_RS20165 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily DM55_RS20225 IPR024571 ERAP1-like C-terminal domain DM55_RS20225 IPR042097 Aminopeptidase N-like , N-terminal DM55_RS20225 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DM55_RS20225 IPR014782 Peptidase M1, membrane alanine aminopeptidase DM55_RS20225 IPR034016 Aminopeptidase N-type DM55_RS20495 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS20495 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS20495 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DM55_RS20500 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 DM55_RS20500 IPR016039 Thiolase-like DM55_RS20500 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM55_RS20500 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal DM55_RS20530 IPR017850 Alkaline-phosphatase-like, core domain superfamily DM55_RS20530 IPR007312 Phosphoesterase DM55_RS20530 IPR006311 Twin-arginine translocation pathway, signal sequence DM55_RS20625 IPR006076 FAD dependent oxidoreductase DM55_RS20625 IPR008471 MnmC-like methyltransferase DM55_RS20625 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC DM55_RS20625 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS20625 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal DM55_RS20675 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site DM55_RS20675 IPR019774 Aromatic amino acid hydroxylase, C-terminal DM55_RS20675 IPR001273 Aromatic amino acid hydroxylase DM55_RS20675 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily DM55_RS20675 IPR005960 Phenylalanine-4-hydroxylase, monomeric form DM55_RS20675 IPR036951 Aromatic amino acid hydroxylase superfamily DM55_RS20735 IPR001851 ABC transporter, permease DM55_RS21300 IPR005668 2-isopropylmalate synthase DM55_RS21300 IPR039371 LeuA, N-terminal catalytic TIM barrel domain DM55_RS21300 IPR000891 Pyruvate carboxyltransferase DM55_RS21300 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily DM55_RS21300 IPR013785 Aldolase-type TIM barrel DM55_RS21300 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site DM55_RS21300 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain DM55_RS21345 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site DM55_RS21345 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily DM55_RS21345 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal DM55_RS21345 IPR017121 Nitrite reductase [NAD(P)H], large subunit DM55_RS21345 IPR007419 BFD-like [2Fe-2S]-binding domain DM55_RS21345 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily DM55_RS21345 IPR036188 FAD/NAD(P)-binding domain superfamily DM55_RS21345 IPR023753 FAD/NAD(P)-binding domain DM55_RS21345 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB DM55_RS21345 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily DM55_RS21345 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DM55_RS21345 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DM55_RS21380 IPR004839 Aminotransferase, class I/classII DM55_RS21380 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS21380 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 DM55_RS21380 IPR015421 Pyridoxal phosphate-dependent transferase, major domain DM55_RS21380 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DM55_RS21380 IPR005861 Histidinol-phosphate aminotransferase family DM55_RS21395 IPR013750 GHMP kinase, C-terminal domain DM55_RS21395 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS21395 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS21395 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase DM55_RS21395 IPR006204 GHMP kinase N-terminal domain DM55_RS21395 IPR036554 GHMP kinase, C-terminal domain superfamily DM55_RS21415 IPR015797 NUDIX hydrolase-like domain superfamily DM55_RS21415 IPR029119 MutY, C-terminal DM55_RS21415 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DM55_RS21415 IPR000445 Helix-hairpin-helix motif DM55_RS21415 IPR004036 Endonuclease III-like, conserved site-2 DM55_RS21415 IPR003265 HhH-GPD domain DM55_RS21415 IPR004035 Endonuclease III, iron-sulphur binding site DM55_RS21415 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif DM55_RS21415 IPR005760 A/G-specific adenine glycosylase MutY DM55_RS21415 IPR011257 DNA glycosylase DM55_RS21465 IPR036291 NAD(P)-binding domain superfamily DM55_RS21465 IPR006037 Regulator of K+ conductance, C-terminal DM55_RS21465 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily DM55_RS21465 IPR038770 Sodium/solute symporter superfamily DM55_RS21465 IPR003148 Regulator of K+ conductance, N-terminal DM55_RS21465 IPR006153 Cation/H+ exchanger DM55_RS21490 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS21490 IPR041102 UvrA, interaction domain DM55_RS21490 IPR041552 UvrA DNA-binding domain DM55_RS21490 IPR004602 UvrABC system subunit A DM55_RS21490 IPR017871 ABC transporter, conserved site DM55_RS21490 IPR003439 ABC transporter-like DM55_RS21820 IPR020617 Thiolase, C-terminal DM55_RS21820 IPR020613 Thiolase, conserved site DM55_RS21820 IPR002155 Thiolase DM55_RS21820 IPR016039 Thiolase-like DM55_RS21820 IPR020615 Thiolase, acyl-enzyme intermediate active site DM55_RS21820 IPR020610 Thiolase, active site DM55_RS21820 IPR020616 Thiolase, N-terminal DM55_RS22025 IPR004845 Type II secretion system GspD, conserved site DM55_RS22025 IPR005644 NolW-like DM55_RS22025 IPR004846 Type II/III secretion system DM55_RS22025 IPR021731 AMIN domain DM55_RS22025 IPR038591 NolW-like superfamily DM55_RS22025 IPR013355 Type IV pilus secretin PilQ DM55_RS22025 IPR001775 GspD/PilQ family DM55_RS22025 IPR011662 Secretin/TonB, short N-terminal domain DM55_RS22060 IPR031376 Penicillin-binding protein, OB-like domain DM55_RS22060 IPR001460 Penicillin-binding protein, transpeptidase DM55_RS22060 IPR036950 Penicillin binding protein transglycosylase domain DM55_RS22060 IPR023346 Lysozyme-like domain superfamily DM55_RS22060 IPR001264 Glycosyl transferase, family 51 DM55_RS22060 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS22080 IPR025948 HTH-like domain DM55_RS22080 IPR001584 Integrase, catalytic core DM55_RS22080 IPR012337 Ribonuclease H-like superfamily DM55_RS22080 IPR036397 Ribonuclease H superfamily DM55_RS22170 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS22170 IPR002121 HRDC domain DM55_RS22170 IPR018982 RQC domain DM55_RS22170 IPR004589 DNA helicase, ATP-dependent, RecQ type DM55_RS22170 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS22170 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial DM55_RS22170 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DM55_RS22170 IPR001650 Helicase, C-terminal DM55_RS22170 IPR014001 Helicase superfamily 1/2, ATP-binding domain DM55_RS22170 IPR011545 DEAD/DEAH box helicase domain DM55_RS22170 IPR010997 HRDC-like superfamily DM55_RS22275 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DM55_RS22275 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily DM55_RS22275 IPR035671 DsbD gamma DM55_RS22275 IPR003834 Cytochrome C biogenesis protein, transmembrane domain DM55_RS22275 IPR013766 Thioredoxin domain DM55_RS22275 IPR017937 Thioredoxin, conserved site DM55_RS22275 IPR036249 Thioredoxin-like superfamily DM55_RS22275 IPR022910 Thiol:disulphide interchange protein DsbD DM55_RS22455 IPR034904 Fe-S cluster assembly domain superfamily DM55_RS22455 IPR002744 MIP18 family-like DM55_RS22455 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit DM55_RS22655 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DM55_RS22655 IPR027398 SecD export protein N-terminal TM domain DM55_RS22655 IPR001036 Acriflavin resistance protein DM55_RS22655 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DM55_RS22655 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DM55_RS22655 IPR005791 Protein translocase subunit SecD DM55_RS22860 IPR025502 TldD DM55_RS22860 IPR002510 Metalloprotease TldD/PmbA DM55_RS22860 IPR035068 Metalloprotease TldD/PmbA, N-terminal DM55_RS22860 IPR036059 Metalloprotease TldD/PmbA superfamily DM55_RS23035 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD DM55_RS23120 IPR014043 Acyl transferase DM55_RS23120 IPR016039 Thiolase-like DM55_RS23120 IPR006162 Phosphopantetheine attachment site DM55_RS23120 IPR009081 Phosphopantetheine binding ACP domain DM55_RS23120 IPR036299 Polyketide synthase, docking domain superfmaily DM55_RS23120 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS23120 IPR013968 Polyketide synthase, ketoreductase domain DM55_RS23120 IPR020843 Polyketide synthase, enoylreductase domain DM55_RS23120 IPR042104 Polyketide synthase, dehydratase domain superfamily DM55_RS23120 IPR020807 Polyketide synthase, dehydratase domain DM55_RS23120 IPR036291 NAD(P)-binding domain superfamily DM55_RS23120 IPR032821 Ketoacyl-synthetase, C-terminal extension DM55_RS23120 IPR001227 Acyl transferase domain superfamily DM55_RS23120 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DM55_RS23120 IPR014030 Beta-ketoacyl synthase, N-terminal DM55_RS23120 IPR014031 Beta-ketoacyl synthase, C-terminal DM55_RS23120 IPR018201 Beta-ketoacyl synthase, active site DM55_RS23120 IPR011032 GroES-like superfamily DM55_RS23120 IPR013154 Alcohol dehydrogenase, N-terminal DM55_RS23120 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS23120 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DM55_RS23120 IPR036736 ACP-like superfamily DM55_RS23170 IPR035649 EFG, domain V DM55_RS23170 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS23170 IPR004161 Translation elongation factor EFTu-like, domain 2 DM55_RS23170 IPR000640 Elongation factor EFG, domain V-like DM55_RS23170 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS23170 IPR005225 Small GTP-binding protein domain DM55_RS23170 IPR000795 Transcription factor, GTP-binding domain DM55_RS23170 IPR009000 Translation protein, beta-barrel domain superfamily DM55_RS23170 IPR004540 Translation elongation factor EFG/EF2 DM55_RS23170 IPR005517 Translation elongation factor EFG/EF2, domain IV DM55_RS23170 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS23170 IPR035647 EF-G domain III/V-like DM55_RS23170 IPR041095 Elongation Factor G, domain II DM55_RS23170 IPR009022 Elongation factor G, domain III DM55_RS23170 IPR031157 Tr-type G domain, conserved site DM55_RS23255 IPR007630 RNA polymerase sigma-70 region 4 DM55_RS23255 IPR007624 RNA polymerase sigma-70 region 3 DM55_RS23255 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS23255 IPR009042 RNA polymerase sigma-70 region 1.2 DM55_RS23255 IPR000943 RNA polymerase sigma-70 DM55_RS23255 IPR036388 Winged helix-like DNA-binding domain superfamily DM55_RS23255 IPR028630 RNA polymerase sigma factor RpoD DM55_RS23255 IPR012760 RNA polymerase sigma factor RpoD, C-terminal DM55_RS23255 IPR013324 RNA polymerase sigma factor, region 3/4-like DM55_RS23255 IPR007127 RNA polymerase sigma factor 70, region 1.1 DM55_RS23255 IPR042189 Sigma-70 factor, region 1.1 superfamily DM55_RS23255 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS23255 IPR007631 RNA polymerase sigma factor 70, non-essential domain DM55_RS23255 IPR014284 RNA polymerase sigma-70 like domain DM55_RS23385 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site DM55_RS23385 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type DM55_RS23385 IPR035926 NusB-like superfamily DM55_RS23385 IPR006027 NusB/RsmB/TIM44 DM55_RS23385 IPR023267 RNA (C5-cytosine) methyltransferase DM55_RS23385 IPR004573 rRNA small subunit methyltransferase B DM55_RS23385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DM55_RS23445 IPR018027 Asn/Gln amidotransferase DM55_RS23445 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like DM55_RS23445 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 DM55_RS23445 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 DM55_RS23445 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site DM55_RS23445 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DM55_RS23445 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E DM55_RS23445 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit DM55_RS23445 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic DM55_RS23490 IPR011701 Major facilitator superfamily DM55_RS23490 IPR020846 Major facilitator superfamily domain DM55_RS23490 IPR004638 Drug resistance transporter EmrB-like DM55_RS23490 IPR036259 MFS transporter superfamily DM55_RS23490 IPR005829 Sugar transporter, conserved site DM55_RS23725 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS23725 IPR003714 PhoH-like protein DM55_RS24010 IPR001576 Phosphoglycerate kinase DM55_RS24010 IPR015824 Phosphoglycerate kinase, N-terminal DM55_RS24010 IPR036043 Phosphoglycerate kinase superfamily DM55_RS24010 IPR015911 Phosphoglycerate kinase, conserved site DM55_RS24025 IPR013785 Aldolase-type TIM barrel DM55_RS24025 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype DM55_RS24025 IPR000771 Fructose-bisphosphate aldolase, class-II DM55_RS24375 IPR016166 FAD-binding domain, PCMH-type DM55_RS24375 IPR036318 FAD-binding, type PCMH-like superfamily DM55_RS24375 IPR016167 FAD-binding, type PCMH, subdomain 1 DM55_RS24375 IPR016169 FAD-binding, type PCMH, subdomain 2 DM55_RS24375 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase DM55_RS24375 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal DM55_RS24375 IPR006094 FAD linked oxidase, N-terminal DM55_RS24375 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily DM55_RS24415 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS24415 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS24415 IPR036291 NAD(P)-binding domain superfamily DM55_RS24540 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal DM55_RS24540 IPR006276 Cobalamin-independent methionine synthase DM55_RS24540 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal DM55_RS24540 IPR038071 UROD/MetE-like superfamily DM55_RS24550 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DM55_RS24550 IPR012779 Peptidase M1, alanyl aminopeptidase DM55_RS24550 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold DM55_RS24550 IPR027268 Peptidase M4/M1, CTD superfamily DM55_RS24550 IPR042097 Aminopeptidase N-like , N-terminal DM55_RS24550 IPR014782 Peptidase M1, membrane alanine aminopeptidase DM55_RS24550 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DM55_RS24550 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily DM55_RS24550 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily DM55_RS24625 IPR020846 Major facilitator superfamily domain DM55_RS24625 IPR036259 MFS transporter superfamily DM55_RS24625 IPR004736 MFS transporter, metabolite:H symporter DM55_RS24625 IPR005829 Sugar transporter, conserved site DM55_RS24625 IPR011701 Major facilitator superfamily DM55_RS24670 IPR006657 Molybdopterin dinucleotide-binding domain DM55_RS24670 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding DM55_RS24670 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DM55_RS24670 IPR036010 2Fe-2S ferredoxin-like superfamily DM55_RS24670 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain DM55_RS24670 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS24670 IPR006656 Molybdopterin oxidoreductase DM55_RS24670 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS24670 IPR009010 Aspartate decarboxylase-like domain superfamily DM55_RS24670 IPR041924 Formate dehydrogenase H, N-terminal DM55_RS24670 IPR006478 Formate dehydrogenase, alpha subunit DM55_RS25050 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DM55_RS25050 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM55_RS25050 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DM55_RS25050 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DM55_RS25050 IPR036291 NAD(P)-binding domain superfamily DM55_RS25090 IPR012340 Nucleic acid-binding, OB-fold DM55_RS25090 IPR021968 Polyribonucleotide phosphorylase C-terminal DM55_RS25090 IPR003029 S1 domain DM55_RS25090 IPR022967 RNA-binding domain, S1 DM55_RS25090 IPR004659 Ribonuclease E/G DM55_RS25090 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DM55_RS25090 IPR028878 Ribonuclease E DM55_RS25135 IPR002347 Short-chain dehydrogenase/reductase SDR DM55_RS25135 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS25135 IPR036291 NAD(P)-binding domain superfamily DM55_RS25135 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase