DM55_RS00010 IPR000093 DNA recombination protein RecR DM55_RS00010 IPR006171 Toprim domain DM55_RS00010 IPR015967 Recombination protein RecR, conserved site DM55_RS00010 IPR023627 Recombination protein RecR DM55_RS00010 IPR023628 Recombination protein RecR, C4-type zinc finger DM55_RS00015 IPR004401 Nucleoid-associated protein YbaB DM55_RS00020 IPR003593 AAA+ ATPase domain DM55_RS00020 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DM55_RS00020 IPR012763 DNA polymerase III, subunit gamma/ tau DM55_RS00020 IPR021029 DNA polymerase III, tau subunit, domain V DM55_RS00020 IPR022754 DNA polymerase III, gamma subunit, domain III DM55_RS00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00025 IPR005746 Thioredoxin DM55_RS00025 IPR012336 Thioredoxin-like fold DM55_RS00025 IPR013766 Thioredoxin domain DM55_RS00025 IPR017937 Thioredoxin, conserved site DM55_RS00035 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DM55_RS00035 IPR003593 AAA+ ATPase domain DM55_RS00035 IPR004665 Transcription termination factor Rho DM55_RS00035 IPR011112 Rho termination factor, N-terminal DM55_RS00035 IPR011113 Rho termination factor, RNA-binding DM55_RS00035 IPR011129 Cold shock protein DM55_RS00035 IPR012340 Nucleic acid-binding, OB-fold DM55_RS00035 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00040 IPR000551 MerR-type HTH domain DM55_RS00040 IPR009061 DNA binding domain, putative DM55_RS00045 IPR011701 Major facilitator superfamily DM55_RS00045 IPR020846 Major facilitator superfamily domain DM55_RS00050 IPR010384 MtfA family DM55_RS00050 IPR024079 Metallopeptidase, catalytic domain DM55_RS00055 IPR002150 Ribosomal protein L31 DM55_RS00055 IPR027493 Ribosomal protein L31 type B DM55_RS00065 IPR002528 Multi antimicrobial extrusion protein DM55_RS00070 IPR003779 Carboxymuconolactone decarboxylase-like DM55_RS00070 IPR029032 AhpD-like DM55_RS00075 IPR000551 MerR-type HTH domain DM55_RS00075 IPR009061 DNA binding domain, putative DM55_RS00080 IPR010994 RuvA domain 2-like DM55_RS00085 IPR009282 Protein of unknown function DUF937 DM55_RS00085 IPR027405 YidB-like DM55_RS00090 IPR001270 ClpA/B family DM55_RS00090 IPR003593 AAA+ ATPase domain DM55_RS00090 IPR003959 ATPase, AAA-type, core DM55_RS00090 IPR004176 Clp, N-terminal DM55_RS00090 IPR017730 Chaperonin ClpB DM55_RS00090 IPR018368 ClpA/B, conserved site 1 DM55_RS00090 IPR019489 Clp ATPase, C-terminal DM55_RS00090 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00090 IPR028299 ClpA/B, conserved site 2 DM55_RS00095 IPR000944 Transcription regulator Rrf2-like DM55_RS00095 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS00100 IPR009050 Globin-like DM55_RS00100 IPR012292 Globin, structural domain DM55_RS00105 IPR003448 Molybdopterin biosynthesis MoaE DM55_RS00110 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 DM55_RS00110 IPR010034 Molybdopterin converting factor, subunit 1 DM55_RS00110 IPR012675 Beta-grasp domain DM55_RS00110 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DM55_RS00115 IPR001453 Molybdopterin binding domain DM55_RS00115 IPR005110 MoeA, N-terminal and linker domain DM55_RS00115 IPR005111 MoeA, C-terminal, domain IV DM55_RS00115 IPR008284 Molybdenum cofactor biosynthesis, conserved site DM55_RS00120 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DM55_RS00120 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS00120 IPR004450 Threonine synthase-like DM55_RS00120 IPR029144 Threonine synthase, N-terminal DM55_RS00125 IPR001342 Homoserine dehydrogenase, catalytic DM55_RS00125 IPR002912 ACT domain DM55_RS00125 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding DM55_RS00125 IPR016040 NAD(P)-binding domain DM55_RS00125 IPR016204 Homoserine dehydrogenase DM55_RS00125 IPR019811 Homoserine dehydrogenase, conserved site DM55_RS00135 IPR007523 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 DM55_RS00145 IPR000390 Small multidrug resistance protein family DM55_RS00150 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DM55_RS00150 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS00150 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS00150 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS00155 IPR001173 Glycosyltransferase 2-like DM55_RS00155 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS00160 IPR002376 Formyl transferase, N-terminal DM55_RS00160 IPR005793 Formyl transferase, C-terminal DM55_RS00160 IPR011034 Formyl transferase, C-terminal-like DM55_RS00165 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain DM55_RS00165 IPR016040 NAD(P)-binding domain DM55_RS00170 IPR002509 Polysaccharide deacetylase DM55_RS00170 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DM55_RS00175 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DM55_RS00175 IPR012336 Thioredoxin-like fold DM55_RS00175 IPR024706 Peroxiredoxin, AhpC-type DM55_RS00180 IPR002716 PIN domain DM55_RS00180 IPR003714 PhoH-like protein DM55_RS00180 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00180 IPR029060 PIN domain-like DM55_RS00185 IPR000064 Endopeptidase, NLPC/P60 domain DM55_RS00190 IPR001204 Phosphate transporter DM55_RS00195 IPR018445 Putitive phosphate transport regulator DM55_RS00200 IPR003593 AAA+ ATPase domain DM55_RS00200 IPR007692 DNA helicase, DnaB type DM55_RS00200 IPR007693 DNA helicase, DnaB-like, N-terminal DM55_RS00200 IPR007694 DNA helicase, DnaB-like, C-terminal DM55_RS00200 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DM55_RS00200 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00205 IPR000244 Ribosomal protein L9 DM55_RS00205 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DM55_RS00205 IPR020069 Ribosomal protein L9, C-terminal DM55_RS00205 IPR020070 Ribosomal protein L9, N-terminal DM55_RS00205 IPR020594 Ribosomal protein L9, bacteria/chloroplast DM55_RS00210 IPR001648 Ribosomal protein S18 DM55_RS00210 IPR018275 Ribosomal protein S18, conserved site DM55_RS00215 IPR012340 Nucleic acid-binding, OB-fold DM55_RS00215 IPR023646 Primosomal replication protein PriB DM55_RS00220 IPR000529 Ribosomal protein S6 DM55_RS00220 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DM55_RS00220 IPR020814 Ribosomal protein S6, plastid/chloroplast DM55_RS00225 IPR027383 Putative zinc-finger DM55_RS00230 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site DM55_RS00230 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS00230 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS00230 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DM55_RS00230 IPR013324 RNA polymerase sigma factor, region 3/4 DM55_RS00230 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS00230 IPR014284 RNA polymerase sigma-70 like domain DM55_RS00235 IPR004843 Calcineurin-like phosphoesterase domain, apaH type DM55_RS00235 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal DM55_RS00235 IPR029052 Metallo-dependent phosphatase-like DM55_RS00240 IPR008972 Cupredoxin DM55_RS00240 IPR028096 EfeO-type cupredoxin-like domain DM55_RS00245 IPR002514 Transposase IS3/IS911family DM55_RS00245 IPR009057 Homeodomain-like DM55_RS00250 IPR001584 Integrase, catalytic core DM55_RS00250 IPR012337 Ribonuclease H-like domain DM55_RS00250 IPR025948 HTH-like domain DM55_RS00255 IPR001584 Integrase, catalytic core DM55_RS00255 IPR012337 Ribonuclease H-like domain DM55_RS00255 IPR025948 HTH-like domain DM55_RS00260 IPR002514 Transposase IS3/IS911family DM55_RS00260 IPR009057 Homeodomain-like DM55_RS00265 IPR004550 L-asparaginase, type II DM55_RS00265 IPR006034 Asparaginase/glutaminase DM55_RS00265 IPR020827 Asparaginase/glutaminase, active site 1 DM55_RS00265 IPR027473 L-asparaginase, C-terminal domain DM55_RS00265 IPR027474 L-asparaginase, N-terminal DM55_RS00265 IPR027475 Asparaginase/glutaminase, active site 2 DM55_RS00270 IPR011690 Phosphate-starvation-induced PsiF repeat DM55_RS00280 IPR007461 Ysc84 actin-binding domain DM55_RS00290 IPR001296 Glycosyl transferase, family 1 DM55_RS00290 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain DM55_RS00295 IPR003959 ATPase, AAA-type, core DM55_RS00295 IPR014555 RecF-like DM55_RS00295 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00300 IPR006685 Mechanosensitive ion channel MscS DM55_RS00300 IPR010920 Like-Sm (LSM) domain DM55_RS00310 IPR002110 Ankyrin repeat DM55_RS00310 IPR020683 Ankyrin repeat-containing domain DM55_RS00315 IPR001130 TatD family DM55_RS00315 IPR015991 Uncharacterised deoxyribonuclease TatD-type DM55_RS00315 IPR018228 Deoxyribonuclease, TatD-related, conserved site DM55_RS00315 IPR032466 DM55_RS00315 DM55_RS00320 IPR016181 Acyl-CoA N-acyltransferase DM55_RS00325 IPR004622 DNA polymerase III, delta prime subunit DM55_RS00325 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00330 IPR018094 Thymidylate kinase DM55_RS00330 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00335 IPR003770 Uncharacterised protein family UPF0755, YceG-like DM55_RS00335 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain DM55_RS00340 IPR006222 Glycine cleavage T-protein, N-terminal DM55_RS00340 IPR017703 YgfZ/GcvT conserved site DM55_RS00345 IPR008551 Protein of unknown function DUF833 DM55_RS00350 IPR000182 GNAT domain DM55_RS00350 IPR016181 Acyl-CoA N-acyltransferase DM55_RS00355 IPR013094 Alpha/beta hydrolase fold-3 DM55_RS00355 IPR029058 Alpha/Beta hydrolase fold DM55_RS00360 IPR002085 Alcohol dehydrogenase superfamily, zinc-type DM55_RS00360 IPR011032 GroES (chaperonin 10)-like DM55_RS00360 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS00360 IPR016040 NAD(P)-binding domain DM55_RS00360 IPR020843 Polyketide synthase, enoylreductase DM55_RS00365 IPR003736 Phenylacetic acid degradation-related domain DM55_RS00365 IPR006683 Thioesterase superfamily DM55_RS00365 IPR029069 HotDog domain DM55_RS00370 IPR011008 Dimeric alpha-beta barrel DM55_RS00370 IPR013097 Stress responsive alpha-beta barrel DM55_RS00380 IPR002155 Thiolase DM55_RS00380 IPR016039 Thiolase-like DM55_RS00380 IPR020613 Thiolase, conserved site DM55_RS00380 IPR020615 Thiolase, acyl-enzyme intermediate active site DM55_RS00380 IPR020616 Thiolase, N-terminal DM55_RS00380 IPR020617 Thiolase, C-terminal DM55_RS00385 IPR000868 Isochorismatase-like DM55_RS00390 IPR001753 Crotonase superfamily DM55_RS00390 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS00390 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS00390 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS00390 IPR013328 Dehydrogenase, multihelical DM55_RS00390 IPR016040 NAD(P)-binding domain DM55_RS00390 IPR029045 ClpP/crotonase-like domain DM55_RS00395 IPR000873 AMP-dependent synthetase/ligase DM55_RS00395 IPR020845 AMP-binding, conserved site DM55_RS00395 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS00400 IPR003846 Uncharacterised protein family UPF0061 DM55_RS00405 IPR002579 Peptide methionine sulphoxide reductase MrsB DM55_RS00405 IPR011057 Mss4-like DM55_RS00405 IPR028427 Peptide methionine sulfoxide reductase DM55_RS00410 IPR006008 Intracellular septation protein A DM55_RS00415 IPR002634 BolA protein DM55_RS00420 IPR027304 Trigger factor/SurA domain DM55_RS00425 IPR016181 Acyl-CoA N-acyltransferase DM55_RS00430 IPR010073 Phosphoribosylformylglycinamidine synthase DM55_RS00430 IPR010918 AIR synthase-related protein, C-terminal domain DM55_RS00430 IPR016188 PurM, N-terminal-like DM55_RS00430 IPR029062 Class I glutamine amidotransferase-like DM55_RS00440 IPR006076 FAD dependent oxidoreductase DM55_RS00440 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS00445 IPR000631 YjeF C-terminal domain DM55_RS00445 IPR004443 YjeF N-terminal domain DM55_RS00445 IPR029056 Ribokinase-like DM55_RS00445 IPR030677 DM55_RS00445 DM55_RS00450 IPR001672 Phosphoglucose isomerase (PGI) DM55_RS00450 IPR018189 Phosphoglucose isomerase, conserved site DM55_RS00450 IPR023096 Phosphoglucose isomerase, C-terminal DM55_RS00455 IPR003439 ABC transporter-like DM55_RS00455 IPR003593 AAA+ ATPase domain DM55_RS00455 IPR017871 ABC transporter, conserved site DM55_RS00455 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00460 IPR013830 DM55_RS00460 DM55_RS00465 IPR027304 Trigger factor/SurA domain DM55_RS00475 IPR029032 AhpD-like DM55_RS00495 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein DM55_RS00510 IPR003111 Peptidase S16, lon N-terminal DM55_RS00510 IPR003593 AAA+ ATPase domain DM55_RS00510 IPR003959 ATPase, AAA-type, core DM55_RS00510 IPR004815 Lon protease, bacterial/eukaryotic-type DM55_RS00510 IPR008268 Peptidase S16, active site DM55_RS00510 IPR008269 Peptidase S16, Lon C-terminal DM55_RS00510 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS00510 IPR015947 PUA-like domain DM55_RS00510 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS00510 IPR027065 Lon protease DM55_RS00510 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00510 IPR027543 Lon protease, bacterial DM55_RS00515 IPR003593 AAA+ ATPase domain DM55_RS00515 IPR003959 ATPase, AAA-type, core DM55_RS00515 IPR004487 Clp protease, ATP-binding subunit ClpX DM55_RS00515 IPR010603 Zinc finger, ClpX C4-type DM55_RS00515 IPR019489 Clp ATPase, C-terminal DM55_RS00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00520 IPR001907 ATP-dependent Clp protease proteolytic subunit DM55_RS00520 IPR018215 ClpP, active site DM55_RS00520 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DM55_RS00520 IPR029045 ClpP/crotonase-like domain DM55_RS00520 IPR033135 DM55_RS00520 DM55_RS00525 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain DM55_RS00525 IPR005215 Trigger factor DM55_RS00525 IPR008880 Trigger factor, C-terminal domain DM55_RS00525 IPR008881 Trigger factor, ribosome-binding, bacterial DM55_RS00525 IPR027304 Trigger factor/SurA domain DM55_RS00535 IPR004381 Glycerate kinase DM55_RS00535 IPR018193 Glycerate kinase, flavodoxin-like domain DM55_RS00540 IPR000835 MarR-type HTH domain DM55_RS00540 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS00540 IPR023187 Transcriptional regulator MarR-type, conserved site DM55_RS00545 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS00545 IPR013328 Dehydrogenase, multihelical DM55_RS00545 IPR013332 Ketopantoate reductase, N-terminal domain DM55_RS00545 IPR013752 Ketopantoate reductase, C-terminal domain DM55_RS00545 IPR016040 NAD(P)-binding domain DM55_RS00550 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS00550 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS00550 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS00555 IPR002299 Porin, Neisseria sp. type DM55_RS00555 IPR023614 Porin domain DM55_RS00560 IPR011701 Major facilitator superfamily DM55_RS00560 IPR020846 Major facilitator superfamily domain DM55_RS00565 IPR000286 Histone deacetylase superfamily DM55_RS00565 IPR023801 Histone deacetylase domain DM55_RS00570 IPR001736 Phospholipase D/Transphosphatidylase DM55_RS00570 IPR025202 Phospholipase D-like domain DM55_RS00585 IPR002514 Transposase IS3/IS911family DM55_RS00585 IPR009057 Homeodomain-like DM55_RS00590 IPR000847 Transcription regulator HTH, LysR DM55_RS00590 IPR005119 LysR, substrate-binding DM55_RS00590 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS00595 IPR003439 ABC transporter-like DM55_RS00595 IPR003593 AAA+ ATPase domain DM55_RS00595 IPR005666 Sulphate transport system permease protein 1 DM55_RS00595 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS00595 IPR017871 ABC transporter, conserved site DM55_RS00595 IPR024765 TOBE-like domain DM55_RS00595 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00600 IPR000515 MetI-like domain DM55_RS00600 IPR005667 Sulphate ABC transporter permease protein 2 DM55_RS00600 IPR011866 Sulphate ABC transporter, permease protein CysW DM55_RS00605 IPR000515 MetI-like domain DM55_RS00605 IPR005667 Sulphate ABC transporter permease protein 2 DM55_RS00605 IPR011865 Sulphate ABC transporter, permease protein CysT DM55_RS00610 IPR000957 Sulphate/thiosulphate-binding, conserved site DM55_RS00610 IPR005669 Thiosulphate/Sulfate-binding protein DM55_RS00615 IPR006197 Peptidase S24, LexA-like DM55_RS00615 IPR006199 LexA repressor, DNA-binding domain DM55_RS00615 IPR006200 LexA repressor DM55_RS00615 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS00615 IPR015927 Peptidase S24/S26A/S26B/S26C DM55_RS00615 IPR019759 Peptidase S24/S26A/S26B DM55_RS00615 IPR028360 Peptidase S24/S26, beta-ribbon domain DM55_RS00625 IPR021330 Protein of unknown function DUF2939 DM55_RS00630 IPR006015 Universal stress protein A DM55_RS00630 IPR006016 UspA DM55_RS00630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS00635 IPR003439 ABC transporter-like DM55_RS00635 IPR003593 AAA+ ATPase domain DM55_RS00635 IPR005978 Nodulation ABC transporter, NodI DM55_RS00635 IPR017871 ABC transporter, conserved site DM55_RS00635 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00640 IPR000412 ABC-2 transporter DM55_RS00640 IPR005981 ABC-2 type transporter, NodJ DM55_RS00640 IPR013525 ABC-2 type transporter DM55_RS00650 IPR005524 Protein of unknown function DUF318, transmembrane DM55_RS00655 IPR001395 Aldo/keto reductase DM55_RS00655 IPR023210 NADP-dependent oxidoreductase domain DM55_RS00660 IPR003736 Phenylacetic acid degradation-related domain DM55_RS00660 IPR006683 Thioesterase superfamily DM55_RS00660 IPR029069 HotDog domain DM55_RS00665 IPR002577 Helix-turn-helix, HxlR type DM55_RS00665 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS00680 IPR001991 Sodium:dicarboxylate symporter DM55_RS00680 IPR033380 DM55_RS00680 DM55_RS00685 IPR001269 tRNA-dihydrouridine synthase DM55_RS00685 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN DM55_RS00685 IPR013785 Aldolase-type TIM barrel DM55_RS00685 IPR018517 tRNA-dihydrouridine synthase, conserved site DM55_RS00695 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS00695 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS00695 IPR032877 DM55_RS00695 DM55_RS00705 IPR002514 Transposase IS3/IS911family DM55_RS00705 IPR009057 Homeodomain-like DM55_RS00715 IPR002060 Squalene/phytoene synthase DM55_RS00715 IPR008949 Terpenoid synthase DM55_RS00715 IPR017828 Squalene/phytoene synthase HpnD DM55_RS00720 IPR010869 Protein of unknown function DUF1501 DM55_RS00725 IPR014917 Protein of unknown function DUF1800 DM55_RS00735 IPR001789 Signal transduction response regulator, receiver domain DM55_RS00735 IPR001867 Signal transduction response regulator, C-terminal DM55_RS00735 IPR011006 CheY-like superfamily DM55_RS00735 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS00735 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS00740 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS00740 IPR003660 HAMP linker domain DM55_RS00740 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS00740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS00740 IPR032408 DM55_RS00740 DM55_RS00745 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DM55_RS00745 IPR012336 Thioredoxin-like fold DM55_RS00745 IPR024706 Peroxiredoxin, AhpC-type DM55_RS00750 IPR003779 Carboxymuconolactone decarboxylase-like DM55_RS00750 IPR004674 Alkylhydroperoxidase AhpD DM55_RS00750 IPR004675 Alkylhydroperoxidase AhpD core DM55_RS00750 IPR029032 AhpD-like DM55_RS00755 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase DM55_RS00755 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site DM55_RS00760 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DM55_RS00760 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site DM55_RS00760 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS00765 IPR001650 Helicase, C-terminal DM55_RS00765 IPR003711 CarD-like/TRCF domain DM55_RS00765 IPR004576 Transcription-repair coupling factor DM55_RS00765 IPR005118 Transcription-repair-coupling factor, C-terminal domain DM55_RS00765 IPR011545 DEAD/DEAH box helicase domain DM55_RS00765 IPR014001 Helicase, superfamily 1/2, ATP-binding domain DM55_RS00765 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS00775 IPR002933 Peptidase M20 DM55_RS00775 IPR010169 Acetylornithine deacetylase (ArgE) DM55_RS00775 IPR011650 Peptidase M20, dimerisation domain DM55_RS00780 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DM55_RS00780 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS00785 IPR021957 Protein of unknown function DUF3574 DM55_RS00790 IPR001264 Glycosyl transferase, family 51 DM55_RS00790 IPR001460 Penicillin-binding protein, transpeptidase DM55_RS00790 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS00790 IPR012340 Nucleic acid-binding, OB-fold DM55_RS00790 IPR023346 Lysozyme-like domain DM55_RS00790 IPR031376 DM55_RS00790 DM55_RS00795 IPR007157 PspA/IM30 DM55_RS00800 IPR011990 Tetratricopeptide-like helical domain DM55_RS00805 IPR001185 Large-conductance mechanosensitive channel DM55_RS00805 IPR019823 Large-conductance mechanosensitive channel, conserved site DM55_RS00820 IPR007247 Ureidoglycolate hydrolase DM55_RS00820 IPR011051 RmlC-like cupin domain DM55_RS00820 IPR023525 Ureidoglycolate hydrolase, bacterial DM55_RS00820 IPR024060 Ureidoglycolate hydrolase domain DM55_RS00825 IPR005164 Allantoicase DM55_RS00825 IPR008979 Galactose-binding domain-like DM55_RS00825 IPR015908 Allantoicase domain DM55_RS00830 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 DM55_RS00830 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase DM55_RS00835 IPR002509 Polysaccharide deacetylase DM55_RS00835 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DM55_RS00835 IPR017625 Putative urate catabolism protein DM55_RS00840 IPR001920 Asp/Glu racemase DM55_RS00840 IPR015942 Asp/Glu/hydantoin racemase DM55_RS00845 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin DM55_RS00850 IPR000524 Transcription regulator HTH, GntR DM55_RS00850 IPR008920 Transcription regulator FadR/GntR, C-terminal DM55_RS00850 IPR011711 GntR, C-terminal DM55_RS00850 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS00855 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS00855 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS00855 IPR032877 DM55_RS00855 DM55_RS00860 IPR003507 Muramoyl-tetrapeptide carboxypeptidase DM55_RS00860 IPR027461 LD-carboxypeptidase A, C-terminal domain DM55_RS00860 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain DM55_RS00860 IPR029062 Class I glutamine amidotransferase-like DM55_RS00865 IPR016192 APOBEC/CMP deaminase, zinc-binding DM55_RS00865 IPR016193 Cytidine deaminase-like DM55_RS00865 IPR028883 tRNA-specific adenosine deaminase DM55_RS00870 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain DM55_RS00875 IPR018531 Domain of unknown function DUF1993 DM55_RS00875 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase DM55_RS00885 IPR001674 GMP synthase, C-terminal DM55_RS00885 IPR004739 GMP synthase, N-terminal DM55_RS00885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS00885 IPR017926 Glutamine amidotransferase DM55_RS00885 IPR022310 NAD/GMP synthase DM55_RS00885 IPR022955 GMP synthase DM55_RS00885 IPR029062 Class I glutamine amidotransferase-like DM55_RS00895 IPR000644 CBS domain DM55_RS00895 IPR001093 IMP dehydrogenase/GMP reductase DM55_RS00895 IPR005990 Inosine-5'-monophosphate dehydrogenase DM55_RS00895 IPR013785 Aldolase-type TIM barrel DM55_RS00895 IPR015875 IMP dehydrogenase / GMP reductase, conserved site DM55_RS00900 IPR010296 Protein of unknown function DUF899, thioredoxin-like DM55_RS00900 IPR012336 Thioredoxin-like fold DM55_RS00905 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS00910 IPR002372 Pyrrolo-quinoline quinone repeat DM55_RS00910 IPR015943 WD40/YVTN repeat-like-containing domain DM55_RS00915 IPR000620 Drug/metabolite transporter DM55_RS00920 IPR005346 RnfH protein DM55_RS00920 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DM55_RS00925 IPR005031 Streptomyces cyclase/dehydrase DM55_RS00925 IPR023393 START-like domain DM55_RS00930 IPR000037 SsrA-binding protein DM55_RS00930 IPR020081 SsrA-binding protein, conserved site DM55_RS00930 IPR023620 Small protein B DM55_RS00935 IPR001107 Band 7 protein DM55_RS00935 IPR001972 Stomatin family DM55_RS00935 IPR032435 DM55_RS00935 DM55_RS00940 IPR002810 NfeD-like, C-terminal domain DM55_RS00945 IPR000121 PEP-utilising enzyme, C-terminal DM55_RS00945 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding DM55_RS00945 IPR006319 Phosphoenolpyruvate synthase DM55_RS00945 IPR008279 PEP-utilising enzyme, mobile domain DM55_RS00945 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS00945 IPR013816 ATP-grasp fold, subdomain 2 DM55_RS00945 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain DM55_RS00945 IPR018274 PEP-utilising enzyme, active site DM55_RS00945 IPR023151 PEP-utilising enzyme, conserved site DM55_RS00950 IPR007719 Phytochelatin synthase DM55_RS00960 IPR000209 Peptidase S8/S53 domain DM55_RS00960 IPR009020 Proteinase inhibitor, propeptide DM55_RS00960 IPR015366 Peptidase S53, propeptide DM55_RS00960 IPR023828 Peptidase S8, subtilisin, Ser-active site DM55_RS00965 IPR005177 Bifunctional kinase-pyrophosphorylase DM55_RS00965 IPR026530 Phosphoenolpyruvate synthase regulatory protein DM55_RS00975 IPR002514 Transposase IS3/IS911family DM55_RS00975 IPR009057 Homeodomain-like DM55_RS00980 IPR001537 tRNA/rRNA methyltransferase, SpoU type DM55_RS00980 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS00980 IPR029028 Alpha/beta knot methyltransferases DM55_RS00980 IPR029064 50S ribosomal protein L30e-like DM55_RS00985 IPR001352 Ribonuclease HII/HIII DM55_RS00985 IPR012337 Ribonuclease H-like domain DM55_RS00985 IPR022898 Ribonuclease HII DM55_RS00985 IPR024567 Ribonuclease HII/HIII domain DM55_RS00990 IPR003835 Glycosyl transferase, family 19 DM55_RS00995 IPR001451 Bacterial transferase hexapeptide repeat DM55_RS00995 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase DM55_RS00995 IPR011004 Trimeric LpxA-like DM55_RS00995 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal DM55_RS01000 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ DM55_RS01000 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ DM55_RS01000 IPR029069 HotDog domain DM55_RS01005 IPR001451 Bacterial transferase hexapeptide repeat DM55_RS01005 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase DM55_RS01005 IPR011004 Trimeric LpxA-like DM55_RS01005 IPR018357 Hexapeptide transferase, conserved site DM55_RS01005 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region DM55_RS01010 IPR005632 Chaperone protein Skp DM55_RS01010 IPR024930 Skp domain DM55_RS01015 IPR000184 Bacterial surface antigen (D15) DM55_RS01015 IPR010827 Surface antigen variable number DM55_RS01015 IPR023707 Outer membrane protein assembly factor BamA DM55_RS01020 IPR001478 PDZ domain DM55_RS01020 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase DM55_RS01020 IPR008915 Peptidase M50 DM55_RS01025 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase DM55_RS01025 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal DM55_RS01025 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal DM55_RS01025 IPR016040 NAD(P)-binding domain DM55_RS01025 IPR026877 DXP reductoisomerase C-terminal domain DM55_RS01030 IPR000374 Phosphatidate cytidylyltransferase DM55_RS01035 IPR001441 Decaprenyl diphosphate synthase-like DM55_RS01035 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site DM55_RS01040 IPR002661 Ribosome recycling factor DM55_RS01040 IPR023584 Ribosome recycling factor domain DM55_RS01045 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS01045 IPR011817 Uridylate kinase DM55_RS01045 IPR015963 Uridylate kinase, bacteria DM55_RS01050 IPR001816 Translation elongation factor EFTs/EF1B DM55_RS01050 IPR009060 UBA-like DM55_RS01050 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation DM55_RS01050 IPR018101 Translation elongation factor Ts, conserved site DM55_RS01055 IPR001865 Ribosomal protein S2 DM55_RS01055 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid DM55_RS01055 IPR018130 Ribosomal protein S2, conserved site DM55_RS01055 IPR023591 Ribosomal protein S2, flavodoxin-like domain DM55_RS01065 IPR000994 Peptidase M24, structural domain DM55_RS01065 IPR001714 Peptidase M24, methionine aminopeptidase DM55_RS01065 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DM55_RS01070 IPR002934 Nucleotidyl transferase domain DM55_RS01070 IPR003607 HD/PDEase domain DM55_RS01070 IPR006674 HD domain DM55_RS01070 IPR010043 Protein-PII uridylyltransferase DM55_RS01070 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase DM55_RS01075 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DM55_RS01075 IPR002942 RNA-binding S4 domain DM55_RS01075 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F DM55_RS01075 IPR020103 Pseudouridine synthase, catalytic domain DM55_RS01080 IPR000181 Formylmethionine deformylase DM55_RS01080 IPR023635 Peptide deformylase DM55_RS01085 IPR001357 BRCT domain DM55_RS01085 IPR001679 NAD-dependent DNA ligase DM55_RS01085 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DM55_RS01085 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type DM55_RS01085 IPR004150 NAD-dependent DNA ligase, OB-fold DM55_RS01085 IPR010994 RuvA domain 2-like DM55_RS01085 IPR012340 Nucleic acid-binding, OB-fold DM55_RS01085 IPR013839 NAD-dependent DNA ligase, adenylation DM55_RS01085 IPR013840 NAD-dependent DNA ligase, N-terminal DM55_RS01085 IPR018239 NAD-dependent DNA ligase, active site DM55_RS01085 IPR033136 DM55_RS01085 DM55_RS01095 IPR007449 ZipA, C-terminal FtsZ-binding domain DM55_RS01100 IPR003395 RecF/RecN/SMC, N-terminal DM55_RS01100 IPR010935 SMCs flexible hinge DM55_RS01100 IPR011890 Structural maintenance of chromosomes protein, prokaryotic DM55_RS01100 IPR024704 Structural maintenance of chromosomes protein DM55_RS01100 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01105 IPR000620 Drug/metabolite transporter DM55_RS01110 IPR004839 Aminotransferase, class I/classII DM55_RS01110 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS01110 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS01110 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS01110 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria DM55_RS01115 IPR001451 Bacterial transferase hexapeptide repeat DM55_RS01115 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family DM55_RS01115 IPR011004 Trimeric LpxA-like DM55_RS01115 IPR018357 Hexapeptide transferase, conserved site DM55_RS01115 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 DM55_RS01120 IPR006504 Transcriptional regulator Spx/MgsR DM55_RS01120 IPR006660 Arsenate reductase-like DM55_RS01120 IPR012336 Thioredoxin-like fold DM55_RS01125 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site DM55_RS01125 IPR002933 Peptidase M20 DM55_RS01125 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria DM55_RS01125 IPR011650 Peptidase M20, dimerisation domain DM55_RS01130 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DM55_RS01130 IPR004556 Modification methylase HemK DM55_RS01130 IPR007848 Methyltransferase small domain DM55_RS01130 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase DM55_RS01130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS01140 IPR001736 Phospholipase D/Transphosphatidylase DM55_RS01140 IPR022924 Cardiolipin synthase DM55_RS01140 IPR025202 Phospholipase D-like domain DM55_RS01140 IPR027379 Cardiolipin synthase N-terminal DM55_RS01140 IPR030840 DM55_RS01140 DM55_RS01145 IPR000889 Glutathione peroxidase DM55_RS01145 IPR012336 Thioredoxin-like fold DM55_RS01145 IPR029759 Glutathione peroxidase active site DM55_RS01145 IPR029760 Glutathione peroxidase conserved site DM55_RS01150 IPR003439 ABC transporter-like DM55_RS01150 IPR003593 AAA+ ATPase domain DM55_RS01150 IPR017871 ABC transporter, conserved site DM55_RS01150 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01150 IPR032524 DM55_RS01150 DM55_RS01150 IPR032781 DM55_RS01150 DM55_RS01155 IPR021294 Protein of unknown function DUF2866 DM55_RS01160 IPR003593 AAA+ ATPase domain DM55_RS01160 IPR004504 DNA repair protein RadA DM55_RS01160 IPR008269 Peptidase S16, Lon C-terminal DM55_RS01160 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS01160 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS01160 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01165 IPR000821 Alanine racemase DM55_RS01165 IPR001608 Alanine racemase, N-terminal DM55_RS01165 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DM55_RS01165 IPR011079 Alanine racemase, C-terminal DM55_RS01165 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site DM55_RS01165 IPR029066 PLP-binding barrel DM55_RS01170 IPR011701 Major facilitator superfamily DM55_RS01170 IPR020846 Major facilitator superfamily domain DM55_RS01175 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase DM55_RS01175 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DM55_RS01175 IPR029056 Ribokinase-like DM55_RS01180 IPR015003 Protein of unknown function DUF1853 DM55_RS01185 IPR005122 Uracil-DNA glycosylase-like DM55_RS01185 IPR005273 Uracil-DNA glycosylase, family 4 domain DM55_RS01190 IPR000182 GNAT domain DM55_RS01190 IPR006464 Ribosomal-protein-alanine acetyltransferase DM55_RS01190 IPR016181 Acyl-CoA N-acyltransferase DM55_RS01195 IPR000905 Gcp-like domain DM55_RS01195 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ DM55_RS01200 IPR000582 Acyl-CoA-binding protein, ACBP DM55_RS01200 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle DM55_RS01205 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site DM55_RS01205 IPR001650 Helicase, C-terminal DM55_RS01205 IPR011545 DEAD/DEAH box helicase domain DM55_RS01205 IPR014001 Helicase, superfamily 1/2, ATP-binding domain DM55_RS01205 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01210 IPR008490 Transposase InsH, N-terminal DM55_RS01215 IPR002514 Transposase IS3/IS911family DM55_RS01215 IPR009057 Homeodomain-like DM55_RS01225 IPR025668 Transposase DDE domain DM55_RS01230 IPR006254 Isocitrate lyase DM55_RS01230 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain DM55_RS01230 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site DM55_RS01235 IPR006015 Universal stress protein A DM55_RS01235 IPR006016 UspA DM55_RS01235 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01240 IPR000847 Transcription regulator HTH, LysR DM55_RS01240 IPR005119 LysR, substrate-binding DM55_RS01240 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS01245 IPR006328 Haloacid dehalogenase, type II DM55_RS01245 IPR006439 HAD hydrolase, subfamily IA DM55_RS01245 IPR023198 Phosphoglycolate phosphatase, domain 2 DM55_RS01245 IPR023214 HAD-like domain DM55_RS01250 IPR001465 Malate synthase DM55_RS01250 IPR006252 Malate synthase A DM55_RS01250 IPR011076 Malate synthase-like DM55_RS01250 IPR019830 Malate synthase, conserved site DM55_RS01255 IPR009288 AIG2-like DM55_RS01255 IPR013024 Butirosin biosynthesis, BtrG-like DM55_RS01260 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase DM55_RS01260 IPR010203 Regulator of ribonuclease activity A DM55_RS01265 IPR003313 AraC-type arabinose-binding/dimerisation domain DM55_RS01265 IPR009057 Homeodomain-like DM55_RS01265 IPR011051 RmlC-like cupin domain DM55_RS01265 IPR014710 RmlC-like jelly roll fold DM55_RS01265 IPR018060 DNA binding HTH domain, AraC-type DM55_RS01265 IPR020449 Transcription regulator HTH, AraC- type DM55_RS01275 IPR000182 GNAT domain DM55_RS01275 IPR016181 Acyl-CoA N-acyltransferase DM55_RS01295 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DM55_RS01295 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS01295 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial DM55_RS01295 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding DM55_RS01295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01295 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DM55_RS01295 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain DM55_RS01295 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 DM55_RS01300 IPR002641 Patatin/Phospholipase A2-related DM55_RS01300 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS01305 IPR000064 Endopeptidase, NLPC/P60 domain DM55_RS01310 IPR003439 ABC transporter-like DM55_RS01310 IPR003593 AAA+ ATPase domain DM55_RS01310 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DM55_RS01310 IPR017871 ABC transporter, conserved site DM55_RS01310 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01315 IPR000515 MetI-like domain DM55_RS01320 IPR000515 MetI-like domain DM55_RS01325 IPR000914 Bacterial extracellular solute-binding protein, family 5 DM55_RS01325 IPR030678 DM55_RS01325 DM55_RS01330 IPR002347 Glucose/ribitol dehydrogenase DM55_RS01330 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) DM55_RS01330 IPR016040 NAD(P)-binding domain DM55_RS01335 IPR024446 DM55_RS01335 DM55_RS01345 IPR006656 Molybdopterin oxidoreductase DM55_RS01345 IPR006657 Molydopterin dinucleotide-binding domain DM55_RS01345 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DM55_RS01345 IPR009010 Aspartate decarboxylase-like domain DM55_RS01350 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DM55_RS01350 IPR008333 Oxidoreductase, FAD-binding domain DM55_RS01350 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS01360 IPR000813 7Fe ferredoxin DM55_RS01360 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS01360 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS01360 IPR022569 Ferredoxin, C-terminal DM55_RS01365 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS01365 IPR009057 Homeodomain-like DM55_RS01365 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DM55_RS01365 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS01370 IPR000994 Peptidase M24, structural domain DM55_RS01370 IPR001714 Peptidase M24, methionine aminopeptidase DM55_RS01370 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DM55_RS01375 IPR021831 Protein of unknown function DUF3423 DM55_RS01380 IPR000362 Fumarate lyase family DM55_RS01380 IPR008948 L-Aspartase-like DM55_RS01380 IPR009049 Argininosuccinate lyase DM55_RS01380 IPR013816 ATP-grasp fold, subdomain 2 DM55_RS01380 IPR022761 Fumarate lyase, N-terminal DM55_RS01380 IPR029419 Argininosuccinate lyase, C-terminal DM55_RS01385 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS01390 IPR006204 GHMP kinase N-terminal domain DM55_RS01390 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS01390 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS01395 IPR002500 Phosphoadenosine phosphosulphate reductase DM55_RS01395 IPR011784 Sulphate adenylyltransferase, small subunit DM55_RS01395 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01400 IPR019290 Glycosyltransferase 2-like, prokaryotic type DM55_RS01400 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS01405 IPR000192 Aminotransferase class V domain DM55_RS01405 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS01405 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS01405 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS01405 IPR022278 Phosphoserine aminotransferase DM55_RS01410 IPR002656 Acyltransferase 3 DM55_RS01415 IPR016040 NAD(P)-binding domain DM55_RS01420 IPR005475 Transketolase-like, pyrimidine-binding domain DM55_RS01420 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II DM55_RS01420 IPR029061 Thiamin diphosphate-binding fold DM55_RS01420 IPR033247 DM55_RS01420 DM55_RS01420 IPR033412 DM55_RS01420 DM55_RS01425 IPR005474 Transketolase, N-terminal DM55_RS01425 IPR029061 Thiamin diphosphate-binding fold DM55_RS01425 IPR033247 DM55_RS01425 DM55_RS01430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01435 IPR029465 TupA-like ATPgrasp protein DM55_RS01440 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS01445 IPR003819 Taurine catabolism dioxygenase TauD/TfdA DM55_RS01450 IPR005331 Sulfotransferase DM55_RS01450 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01455 IPR000873 AMP-dependent synthetase/ligase DM55_RS01455 IPR001242 Condensation domain DM55_RS01455 IPR009081 Acyl carrier protein-like DM55_RS01455 IPR010060 Non-ribosomal peptide synthase DM55_RS01455 IPR010071 Amino acid adenylation domain DM55_RS01455 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS01455 IPR020845 AMP-binding, conserved site DM55_RS01455 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS01455 IPR029058 Alpha/Beta hydrolase fold DM55_RS01460 IPR000873 AMP-dependent synthetase/ligase DM55_RS01460 IPR001242 Condensation domain DM55_RS01460 IPR006162 Phosphopantetheine attachment site DM55_RS01460 IPR009081 Acyl carrier protein-like DM55_RS01460 IPR010071 Amino acid adenylation domain DM55_RS01460 IPR020845 AMP-binding, conserved site DM55_RS01460 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS01465 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS01470 IPR010290 Transmembrane secretion effector DM55_RS01470 IPR020846 Major facilitator superfamily domain DM55_RS01475 IPR000873 AMP-dependent synthetase/ligase DM55_RS01475 IPR006162 Phosphopantetheine attachment site DM55_RS01475 IPR009081 Acyl carrier protein-like DM55_RS01475 IPR010071 Amino acid adenylation domain DM55_RS01475 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS01475 IPR020845 AMP-binding, conserved site DM55_RS01475 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS01480 IPR002891 Adenylylsulphate kinase DM55_RS01480 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS01485 IPR006143 RND efflux pump, membrane fusion protein DM55_RS01485 IPR022824 Multidrug resistance protein MdtA DM55_RS01490 IPR001036 Acriflavin resistance protein DM55_RS01490 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DM55_RS01495 IPR020846 Major facilitator superfamily domain DM55_RS01500 IPR005546 Autotransporter beta-domain DM55_RS01500 IPR013830 DM55_RS01500 DM55_RS01515 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS01515 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS01515 IPR032877 DM55_RS01515 DM55_RS01525 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS01525 IPR001057 Glutamate/acetylglutamate kinase DM55_RS01525 IPR001341 Aspartate kinase domain DM55_RS01525 IPR002912 ACT domain DM55_RS01525 IPR005260 Aspartate kinase, monofunctional class DM55_RS01525 IPR018042 Aspartate kinase, conserved site DM55_RS01525 IPR027795 GATS-like ACT domain DM55_RS01530 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase DM55_RS01530 IPR012094 Lysidine-tRNA(Ile) synthetase DM55_RS01530 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal DM55_RS01530 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal DM55_RS01530 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01530 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain DM55_RS01530 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 DM55_RS01535 IPR001095 Acetyl-CoA carboxylase, alpha subunit DM55_RS01535 IPR029045 ClpP/crotonase-like domain DM55_RS01540 IPR003265 HhH-GPD domain DM55_RS01540 IPR011257 DNA glycosylase DM55_RS01540 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DM55_RS01545 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding DM55_RS01545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01545 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR DM55_RS01545 IPR015803 Cysteine-tRNA ligase DM55_RS01545 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase DM55_RS01545 IPR032678 DM55_RS01545 DM55_RS01550 IPR011990 Tetratricopeptide-like helical domain DM55_RS01550 IPR019734 Tetratricopeptide repeat DM55_RS01555 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DM55_RS01555 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DM55_RS01555 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase DM55_RS01555 IPR029000 Cyclophilin-like domain DM55_RS01560 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain DM55_RS01560 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site DM55_RS01560 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase DM55_RS01560 IPR029000 Cyclophilin-like domain DM55_RS01565 IPR004843 Calcineurin-like phosphoesterase domain, apaH type DM55_RS01565 IPR010138 UDP-2,3-diacylglucosamine hydrolase DM55_RS01565 IPR029052 Metallo-dependent phosphatase-like DM55_RS01570 IPR001451 Bacterial transferase hexapeptide repeat DM55_RS01570 IPR005881 Serine O-acetyltransferase DM55_RS01570 IPR011004 Trimeric LpxA-like DM55_RS01575 IPR001537 tRNA/rRNA methyltransferase, SpoU type DM55_RS01575 IPR004384 RNA methyltransferase TrmH, group 1 DM55_RS01575 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS01575 IPR029028 Alpha/beta knot methyltransferases DM55_RS01580 IPR000760 Inositol monophosphatase DM55_RS01580 IPR020550 Inositol monophosphatase, conserved site DM55_RS01580 IPR020583 Inositol monophosphatase, metal-binding site DM55_RS01580 IPR022337 Inositol monophosphatase, SuhB DM55_RS01595 IPR000432 DNA mismatch repair protein MutS, C-terminal DM55_RS01595 IPR005748 DNA mismatch repair protein MutS, type 1 DM55_RS01595 IPR007695 DNA mismatch repair protein MutS-like, N-terminal DM55_RS01595 IPR007696 DNA mismatch repair protein MutS, core DM55_RS01595 IPR007860 DNA mismatch repair protein MutS, connector domain DM55_RS01595 IPR007861 DNA mismatch repair protein MutS, clamp DM55_RS01595 IPR016151 DNA mismatch repair protein MutS, N-terminal DM55_RS01595 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01610 IPR003347 JmjC domain DM55_RS01620 IPR001279 Beta-lactamase-like DM55_RS01625 IPR010653 Lipoprotein, NlpB DM55_RS01630 IPR002220 DapA-like DM55_RS01630 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA DM55_RS01630 IPR013785 Aldolase-type TIM barrel DM55_RS01630 IPR020625 Dihydrodipicolinate synthetase, active site DM55_RS01635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS01640 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS01640 IPR002305 Aminoacyl-tRNA synthetase, class Ic DM55_RS01640 IPR002306 Tryptophan-tRNA ligase DM55_RS01640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01640 IPR024109 Tryptophan-tRNA ligase, bacterial-type DM55_RS01650 IPR006070 YrdC-like domain DM55_RS01650 IPR017945 DHBP synthase RibB-like alpha/beta domain DM55_RS01655 IPR003141 Polymerase/histidinol phosphatase, N-terminal DM55_RS01655 IPR004013 PHP, C-terminal DM55_RS01655 IPR016195 Polymerase/histidinol phosphatase-like DM55_RS01660 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS01660 IPR029058 Alpha/Beta hydrolase fold DM55_RS01665 IPR007402 Protein of unknown function DUF455 DM55_RS01665 IPR009078 Ferritin-like superfamily DM55_RS01665 IPR011197 Uncharacterised conserved protein UCP012318 DM55_RS01665 IPR012347 Ferritin-related DM55_RS01670 IPR001451 Bacterial transferase hexapeptide repeat DM55_RS01670 IPR011004 Trimeric LpxA-like DM55_RS01675 IPR000397 Heat shock protein Hsp33 DM55_RS01675 IPR016153 Heat shock protein Hsp33, N-terminal DM55_RS01675 IPR016154 Heat shock protein Hsp33, C-terminal DM55_RS01675 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain DM55_RS01685 IPR007060 Septum formation initiator FtsL/DivIC DM55_RS01685 IPR023081 Cell division protein FtsB DM55_RS01690 IPR000941 Enolase DM55_RS01690 IPR020809 Enolase, conserved site DM55_RS01690 IPR020810 Enolase, C-terminal DM55_RS01690 IPR020811 Enolase, N-terminal DM55_RS01690 IPR029017 Enolase N-terminal domain-like DM55_RS01690 IPR029065 Enolase C-terminal domain-like DM55_RS01695 IPR006218 DAHP synthetase I/KDSA DM55_RS01695 IPR006269 3-deoxy-8-phosphooctulonate synthase DM55_RS01695 IPR013785 Aldolase-type TIM barrel DM55_RS01700 IPR004468 CTP synthase DM55_RS01700 IPR017456 CTP synthase, N-terminal DM55_RS01700 IPR017926 Glutamine amidotransferase DM55_RS01700 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01700 IPR029062 Class I glutamine amidotransferase-like DM55_RS01705 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS01705 IPR029058 Alpha/Beta hydrolase fold DM55_RS01710 IPR001279 Beta-lactamase-like DM55_RS01710 IPR004477 ComEC/Rec2-related protein DM55_RS01710 IPR004797 Competence protein ComEC/Rec2 DM55_RS01710 IPR025405 Domain of unknown function DUF4131 DM55_RS01715 IPR001130 TatD family DM55_RS01715 IPR018228 Deoxyribonuclease, TatD-related, conserved site DM55_RS01715 IPR032466 DM55_RS01715 DM55_RS01720 IPR003439 ABC transporter-like DM55_RS01720 IPR003593 AAA+ ATPase domain DM55_RS01720 IPR011924 Lipoprotein releasing system, ATP-binding protein DM55_RS01720 IPR017871 ABC transporter, conserved site DM55_RS01720 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01725 IPR003838 Permease FtsX-like DM55_RS01725 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family DM55_RS01725 IPR025857 MacB-like periplasmic core domain DM55_RS01730 IPR016631 Regulatory, RpfE DM55_RS01735 IPR001667 DDH domain DM55_RS01735 IPR003156 DHHA1 domain DM55_RS01735 IPR004610 Bacterial RecJ exonuclease DM55_RS01740 IPR000352 Peptide chain release factor class I/class II DM55_RS01740 IPR004374 Peptide chain release factor 2 DM55_RS01740 IPR005139 Peptide chain release factor DM55_RS01740 IPR014720 Double-stranded RNA-binding domain DM55_RS01745 IPR002313 Lysine-tRNA ligase, class II DM55_RS01745 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DM55_RS01745 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DM55_RS01745 IPR012340 Nucleic acid-binding, OB-fold DM55_RS01745 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal DM55_RS01745 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like DM55_RS01750 IPR008816 Glycine zipper 2TM domain DM55_RS01755 IPR007479 ISC system FeS cluster assembly, IscX DM55_RS01760 IPR001041 2Fe-2S ferredoxin-type domain DM55_RS01760 IPR001055 Adrenodoxin DM55_RS01760 IPR011536 Ferredoxin, 2Fe-2S type DM55_RS01760 IPR012675 Beta-grasp domain DM55_RS01760 IPR018298 Adrenodoxin, iron-sulphur binding site DM55_RS01765 IPR010236 ISC system FeS cluster assembly, HscA chaperone DM55_RS01765 IPR013126 Heat shock protein 70 family DM55_RS01765 IPR018181 Heat shock protein 70, conserved site DM55_RS01765 IPR029047 Heat shock protein 70kD, peptide-binding domain DM55_RS01765 IPR029048 Heat shock protein 70kD, C-terminal domain DM55_RS01770 IPR001623 DnaJ domain DM55_RS01770 IPR004640 Co-chaperone Hsc20 DM55_RS01770 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain DM55_RS01775 IPR000361 FeS cluster biogenesis DM55_RS01775 IPR011302 ISC system FeS cluster assembly, IscA scaffold DM55_RS01775 IPR016092 FeS cluster insertion protein DM55_RS01775 IPR017870 FeS cluster insertion, C-terminal, conserved site DM55_RS01775 IPR031108 DM55_RS01775 DM55_RS01780 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal DM55_RS01780 IPR011339 ISC system FeS cluster assembly, IscU scaffold DM55_RS01785 IPR000192 Aminotransferase class V domain DM55_RS01785 IPR010240 Cysteine desulfurase DM55_RS01785 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS01785 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS01785 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS01785 IPR016454 Cysteine desulfurase, NifS DM55_RS01785 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site DM55_RS01790 IPR000944 Transcription regulator Rrf2-like DM55_RS01790 IPR010242 Transcription factor HTH, IscR DM55_RS01790 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS01795 IPR017867 Protein-tyrosine phosphatase, low molecular weight DM55_RS01795 IPR023485 Phosphotyrosine protein phosphatase I superfamily DM55_RS01805 IPR003741 Domain of unknown function DUF162 DM55_RS01805 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS01805 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS01805 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain DM55_RS01805 IPR024569 4Fe-4S binding protein, C-terminal DM55_RS01810 IPR004017 Cysteine-rich domain DM55_RS01815 IPR005471 Transcription regulator IclR, N-terminal DM55_RS01815 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS01815 IPR014757 Transcription regulator IclR, C-terminal DM55_RS01815 IPR029016 GAF domain-like DM55_RS01825 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase DM55_RS01830 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain DM55_RS01835 IPR001405 RadC protein DM55_RS01835 IPR010994 RuvA domain 2-like DM55_RS01835 IPR020891 Uncharacterised protein family UPF0758, conserved site DM55_RS01835 IPR025657 RadC-like JAB domain DM55_RS01840 IPR001383 Ribosomal protein L28 DM55_RS01840 IPR026569 Ribosomal protein L28/L24 DM55_RS01845 IPR001705 Ribosomal protein L33 DM55_RS01845 IPR011332 Zinc-binding ribosomal protein DM55_RS01845 IPR018264 Ribosomal protein L33, conserved site DM55_RS01850 IPR003953 FAD binding domain DM55_RS01850 IPR005288 L-aspartate oxidase DM55_RS01850 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal DM55_RS01850 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS01850 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain DM55_RS01850 IPR030664 DM55_RS01850 DM55_RS01855 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal DM55_RS01855 IPR004393 Nicotinate-nucleotide pyrophosphorylase DM55_RS01855 IPR013785 Aldolase-type TIM barrel DM55_RS01855 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal DM55_RS01855 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD DM55_RS01860 IPR003473 Quinolinate synthetase A DM55_RS01860 IPR023513 Quinolinate synthase A, type 1 DM55_RS01865 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS01865 IPR005804 Fatty acid desaturase, type 1 DM55_RS01865 IPR015876 Fatty acid desaturase, type 1, core DM55_RS01870 IPR006685 Mechanosensitive ion channel MscS DM55_RS01870 IPR010920 Like-Sm (LSM) domain DM55_RS01870 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DM55_RS01870 IPR011066 Mechanosensitive ion channel MscS, C-terminal DM55_RS01875 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p DM55_RS01875 IPR023267 RNA (C5-cytosine) methyltransferase DM55_RS01875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS01880 IPR002376 Formyl transferase, N-terminal DM55_RS01880 IPR004607 Phosphoribosylglycinamide formyltransferase DM55_RS01885 IPR002606 Riboflavin kinase, bacterial DM55_RS01885 IPR004821 Cytidyltransferase-like domain DM55_RS01885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01885 IPR015864 FAD synthetase DM55_RS01885 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic DM55_RS01885 IPR023465 Riboflavin kinase domain DM55_RS01885 IPR023468 Riboflavin kinase DM55_RS01890 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS01890 IPR002300 Aminoacyl-tRNA synthetase, class Ia DM55_RS01890 IPR002301 Isoleucine-tRNA ligase DM55_RS01890 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DM55_RS01890 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding DM55_RS01890 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase DM55_RS01890 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DM55_RS01890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS01890 IPR023585 Isoleucine-tRNA ligase, type 1 DM55_RS01895 IPR001872 Peptidase A8, signal peptidase II DM55_RS01900 IPR003382 Flavoprotein DM55_RS01900 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC DM55_RS01900 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal DM55_RS01905 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase DM55_RS01905 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase DM55_RS01905 IPR029054 dUTPase-like DM55_RS01910 IPR007136 Protein of unknown function DUF347 DM55_RS01920 IPR002514 Transposase IS3/IS911family DM55_RS01920 IPR009057 Homeodomain-like DM55_RS01925 IPR001584 Integrase, catalytic core DM55_RS01925 IPR012337 Ribonuclease H-like domain DM55_RS01925 IPR025948 HTH-like domain DM55_RS01930 IPR002293 Amino acid/polyamine transporter I DM55_RS01930 IPR004840 Amino acid permease, conserved site DM55_RS01930 IPR004841 Amino acid permease/ SLC12A domain DM55_RS01935 IPR001270 ClpA/B family DM55_RS01935 IPR003593 AAA+ ATPase domain DM55_RS01935 IPR003959 ATPase, AAA-type, core DM55_RS01935 IPR004176 Clp, N-terminal DM55_RS01935 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA DM55_RS01935 IPR018368 ClpA/B, conserved site 1 DM55_RS01935 IPR019489 Clp ATPase, C-terminal DM55_RS01935 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01935 IPR028299 ClpA/B, conserved site 2 DM55_RS01940 IPR003769 Adaptor protein ClpS, core DM55_RS01940 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DM55_RS01940 IPR022935 ATP-dependent Clp protease adaptor protein ClpS DM55_RS01945 IPR001584 Integrase, catalytic core DM55_RS01945 IPR012337 Ribonuclease H-like domain DM55_RS01945 IPR025948 HTH-like domain DM55_RS01950 IPR002514 Transposase IS3/IS911family DM55_RS01950 IPR009057 Homeodomain-like DM55_RS01955 IPR002059 Cold-shock protein, DNA-binding DM55_RS01955 IPR011129 Cold shock protein DM55_RS01955 IPR012156 Cold shock, CspA DM55_RS01955 IPR012340 Nucleic acid-binding, OB-fold DM55_RS01955 IPR019844 Cold-shock conserved site DM55_RS01965 IPR000850 Adenylate kinase/UMP-CMP kinase DM55_RS01965 IPR006259 Adenylate kinase subfamily DM55_RS01965 IPR007862 Adenylate kinase, active site lid domain DM55_RS01965 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01970 IPR003329 Acylneuraminate cytidylyltransferase DM55_RS01970 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase DM55_RS01970 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS01975 IPR005651 Uncharacterised protein family UPF0434/Trm112 DM55_RS01975 IPR005735 Zinc finger, LSD1-type DM55_RS01980 IPR003758 Tetraacyldisaccharide 4'-kinase DM55_RS01980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS01985 IPR003753 Exonuclease VII, large subunit DM55_RS01985 IPR020579 Exonuclease VII, large subunit, C-terminal DM55_RS01985 IPR025824 OB-fold nucleic acid binding domain DM55_RS01990 IPR001189 Manganese/iron superoxide dismutase DM55_RS01990 IPR019831 Manganese/iron superoxide dismutase, N-terminal DM55_RS01990 IPR019832 Manganese/iron superoxide dismutase, C-terminal DM55_RS01990 IPR019833 Manganese/iron superoxide dismutase, binding site DM55_RS01995 IPR008490 Transposase InsH, N-terminal DM55_RS02000 IPR002514 Transposase IS3/IS911family DM55_RS02000 IPR009057 Homeodomain-like DM55_RS02005 IPR001584 Integrase, catalytic core DM55_RS02005 IPR012337 Ribonuclease H-like domain DM55_RS02005 IPR025948 HTH-like domain DM55_RS02010 IPR004520 tRNA modification GTPase MnmE DM55_RS02010 IPR005225 Small GTP-binding protein domain DM55_RS02010 IPR006073 GTP binding domain DM55_RS02010 IPR018948 GTP-binding protein TrmE, N-terminal DM55_RS02010 IPR025867 tRNA modification GTPase MnmE C-terminal domain DM55_RS02010 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DM55_RS02010 IPR027368 tRNA modification GTPase MnmE domain 2 DM55_RS02010 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02015 IPR010982 Lambda repressor-like, DNA-binding domain DM55_RS02020 IPR001708 Membrane insertase OXA1/ALB3/YidC DM55_RS02020 IPR019998 Membrane insertase YidC DM55_RS02020 IPR028053 Membrane insertase YidC, N-terminal DM55_RS02020 IPR028055 Membrane insertase YidC/Oxa1, C-terminal DM55_RS02025 IPR002696 Putative membrane protein insertion efficiency factor DM55_RS02030 IPR000100 Ribonuclease P DM55_RS02030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS02030 IPR020539 Ribonuclease P, conserved site DM55_RS02030 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS02035 IPR000271 Ribosomal protein L34 DM55_RS02035 IPR020939 Ribosomal protein L34, conserved site DM55_RS02040 IPR001957 Chromosomal replication control, initiator DnaA DM55_RS02040 IPR003593 AAA+ ATPase domain DM55_RS02040 IPR010921 Trp repressor/replication initiator DM55_RS02040 IPR013159 Chromosomal replication initiator, DnaA C-terminal DM55_RS02040 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) DM55_RS02040 IPR018312 Chromosomal replication control, initiator DnaA, conserved site DM55_RS02040 IPR020591 Chromosomal replication control, initiator DnaA-like DM55_RS02040 IPR024633 DnaA N-terminal domain DM55_RS02040 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02045 IPR001001 DNA polymerase III, beta chain DM55_RS02045 IPR022634 DNA polymerase III, beta chain, N-terminal DM55_RS02045 IPR022635 DNA polymerase III, beta chain, C-terminal DM55_RS02045 IPR022637 DNA polymerase III, beta chain, central DM55_RS02050 IPR000565 DNA topoisomerase, type IIA, subunit B DM55_RS02050 IPR001241 DNA topoisomerase, type IIA DM55_RS02050 IPR002288 DNA gyrase B subunit, C-terminal DM55_RS02050 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS02050 IPR006171 Toprim domain DM55_RS02050 IPR011557 DNA gyrase, subunit B DM55_RS02050 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DM55_RS02050 IPR013759 DNA topoisomerase, type IIA, central domain DM55_RS02050 IPR013760 DNA topoisomerase, type IIA-like domain DM55_RS02050 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS02050 IPR018522 DNA topoisomerase, type IIA, conserved site DM55_RS02050 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS02055 IPR002514 Transposase IS3/IS911family DM55_RS02055 IPR009057 Homeodomain-like DM55_RS02060 IPR001584 Integrase, catalytic core DM55_RS02060 IPR012337 Ribonuclease H-like domain DM55_RS02060 IPR025948 HTH-like domain DM55_RS02065 IPR003779 Carboxymuconolactone decarboxylase-like DM55_RS02065 IPR004675 Alkylhydroperoxidase AhpD core DM55_RS02065 IPR029032 AhpD-like DM55_RS02070 IPR022045 Insecticide toxin TcdB middle/N-terminal DM55_RS02070 IPR022385 Rhs repeat-associated core DM55_RS02080 IPR011990 Tetratricopeptide-like helical domain DM55_RS02105 IPR000253 Forkhead-associated (FHA) domain DM55_RS02105 IPR008984 SMAD/FHA domain DM55_RS02110 IPR000719 Protein kinase domain DM55_RS02110 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase DM55_RS02110 IPR008271 Serine/threonine-protein kinase, active site DM55_RS02110 IPR011009 Protein kinase-like domain DM55_RS02110 IPR011990 Tetratricopeptide-like helical domain DM55_RS02110 IPR023889 TOMM system kinase/cyclase fusion protein DM55_RS02110 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02110 IPR029787 Nucleotide cyclase DM55_RS02115 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma DM55_RS02115 IPR022261 Ribosomal natural product, two-chain TOMM family DM55_RS02120 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma DM55_RS02120 IPR022261 Ribosomal natural product, two-chain TOMM family DM55_RS02125 IPR003776 YcaO-like domain DM55_RS02125 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain DM55_RS02125 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component DM55_RS02130 IPR001303 Class II aldolase/adducin N-terminal DM55_RS02135 IPR000014 PAS domain DM55_RS02135 IPR000160 GGDEF domain DM55_RS02135 IPR001633 EAL domain DM55_RS02135 IPR029787 Nucleotide cyclase DM55_RS02140 IPR002797 Polysaccharide biosynthesis protein DM55_RS02145 IPR001296 Glycosyl transferase, family 1 DM55_RS02150 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal DM55_RS02150 IPR005835 Nucleotidyl transferase DM55_RS02150 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase DM55_RS02150 IPR011051 RmlC-like cupin domain DM55_RS02150 IPR014710 RmlC-like jelly roll fold DM55_RS02150 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS02155 IPR016181 Acyl-CoA N-acyltransferase DM55_RS02160 IPR001296 Glycosyl transferase, family 1 DM55_RS02160 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain DM55_RS02165 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DM55_RS02170 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS02170 IPR002197 DNA binding HTH domain, Fis-type DM55_RS02170 IPR003593 AAA+ ATPase domain DM55_RS02170 IPR009057 Homeodomain-like DM55_RS02170 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS02170 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS02170 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02175 IPR029058 Alpha/Beta hydrolase fold DM55_RS02180 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich DM55_RS02180 IPR008979 Galactose-binding domain-like DM55_RS02180 IPR013781 Glycoside hydrolase, catalytic domain DM55_RS02180 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain DM55_RS02180 IPR017853 Glycoside hydrolase, superfamily DM55_RS02185 IPR014989 Protein of unknown function DUF1839 DM55_RS02195 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS02195 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS02195 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DM55_RS02195 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS02200 IPR009081 Acyl carrier protein-like DM55_RS02205 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS02205 IPR012318 Helix-turn-helix motif, Crp-type DM55_RS02205 IPR014710 RmlC-like jelly roll fold DM55_RS02205 IPR018490 Cyclic nucleotide-binding-like DM55_RS02210 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS02210 IPR012318 Helix-turn-helix motif, Crp-type DM55_RS02210 IPR014710 RmlC-like jelly roll fold DM55_RS02210 IPR018490 Cyclic nucleotide-binding-like DM55_RS02215 IPR003362 Bacterial sugar transferase DM55_RS02215 IPR016040 NAD(P)-binding domain DM55_RS02215 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ DM55_RS02215 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DM55_RS02220 IPR003715 Polysaccharide export protein DM55_RS02220 IPR019554 Soluble ligand binding domain DM55_RS02225 IPR001296 Glycosyl transferase, family 1 DM55_RS02230 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel DM55_RS02240 IPR002085 Alcohol dehydrogenase superfamily, zinc-type DM55_RS02240 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DM55_RS02240 IPR011032 GroES (chaperonin 10)-like DM55_RS02240 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS02240 IPR013154 Alcohol dehydrogenase GroES-like DM55_RS02240 IPR016040 NAD(P)-binding domain DM55_RS02240 IPR020843 Polyketide synthase, enoylreductase DM55_RS02240 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DM55_RS02245 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS02245 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS02245 IPR032877 DM55_RS02245 DM55_RS02250 IPR009057 Homeodomain-like DM55_RS02250 IPR009594 Transcription regulator HTH, AraC, N-terminal DM55_RS02250 IPR018060 DNA binding HTH domain, AraC-type DM55_RS02255 IPR001915 Peptidase M48 DM55_RS02260 IPR011701 Major facilitator superfamily DM55_RS02260 IPR020846 Major facilitator superfamily domain DM55_RS02265 IPR010743 Methionine biosynthesis MetW DM55_RS02265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS02270 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS02270 IPR008220 Homoserine acetyltransferase DM55_RS02270 IPR029058 Alpha/Beta hydrolase fold DM55_RS02275 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS02275 IPR009057 Homeodomain-like DM55_RS02275 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS02280 IPR006439 HAD hydrolase, subfamily IA DM55_RS02280 IPR010237 Pyrimidine 5-nucleotidase DM55_RS02280 IPR023214 HAD-like domain DM55_RS02285 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS02285 IPR004662 Acetylglutamate kinase DM55_RS02290 IPR032720 DM55_RS02290 DM55_RS02295 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS02295 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS02295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS02300 IPR001789 Signal transduction response regulator, receiver domain DM55_RS02300 IPR002197 DNA binding HTH domain, Fis-type DM55_RS02300 IPR009057 Homeodomain-like DM55_RS02300 IPR011006 CheY-like superfamily DM55_RS02305 IPR003593 AAA+ ATPase domain DM55_RS02305 IPR003959 ATPase, AAA-type, core DM55_RS02305 IPR004491 Heat shock protein HslU DM55_RS02305 IPR019489 Clp ATPase, C-terminal DM55_RS02305 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02310 IPR001353 Proteasome, subunit alpha/beta DM55_RS02310 IPR022281 ATP-dependent protease, HslV subunit DM55_RS02310 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS02315 IPR000962 Zinc finger, DksA/TraR C4-type DM55_RS02315 IPR012784 RNA polymerase-binding transcription factor DksA DM55_RS02315 IPR020458 Zinc finger, DksA/TraR C4-type conserved site DM55_RS02320 IPR003495 CobW/HypB/UreG domain DM55_RS02320 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DM55_RS02320 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02325 IPR002478 PUA domain DM55_RS02325 IPR015947 PUA-like domain DM55_RS02325 IPR019614 S-adenosylmethionine-dependent methyltransferase DM55_RS02325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS02330 IPR002104 Integrase, catalytic DM55_RS02330 IPR004107 Integrase, SAM-like, N-terminal DM55_RS02330 IPR011010 DNA breaking-rejoining enzyme, catalytic core DM55_RS02330 IPR011931 Tyrosine recombinase XerC DM55_RS02330 IPR013762 Integrase-like, catalytic core DM55_RS02330 IPR023009 Tyrosine recombinase XerC/XerD DM55_RS02330 IPR023109 Integrase/recombinase, N-terminal DM55_RS02335 IPR007435 Protein of unknown function DUF484 DM55_RS02340 IPR001653 Diaminopimelate epimerase, DapF DM55_RS02340 IPR018510 Diaminopimelate epimerase, active site DM55_RS02345 IPR004960 Bacterial lipid A biosynthesis acyltransferase DM55_RS02350 IPR002133 S-adenosylmethionine synthetase DM55_RS02350 IPR022628 S-adenosylmethionine synthetase, N-terminal DM55_RS02350 IPR022629 S-adenosylmethionine synthetase, central domain DM55_RS02350 IPR022630 S-adenosylmethionine synthetase, C-terminal DM55_RS02350 IPR022631 S-adenosylmethionine synthetase, conserved site DM55_RS02350 IPR022636 S-adenosylmethionine synthetase superfamily DM55_RS02360 IPR008775 Phytanoyl-CoA dioxygenase DM55_RS02365 IPR021521 Protein of unknown function DUF3185 DM55_RS02370 IPR001395 Aldo/keto reductase DM55_RS02370 IPR023210 NADP-dependent oxidoreductase domain DM55_RS02380 IPR000620 Drug/metabolite transporter DM55_RS02385 IPR011701 Major facilitator superfamily DM55_RS02385 IPR020846 Major facilitator superfamily domain DM55_RS02395 IPR002575 Aminoglycoside phosphotransferase DM55_RS02395 IPR011009 Protein kinase-like domain DM55_RS02395 IPR032882 DM55_RS02395 DM55_RS02405 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent DM55_RS02405 IPR015590 Aldehyde dehydrogenase domain DM55_RS02405 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS02405 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS02405 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS02405 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS02415 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal DM55_RS02415 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal DM55_RS02415 IPR012132 Glucose-methanol-choline oxidoreductase DM55_RS02415 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS02420 IPR021136 Flagellar hook-length control protein-like, C-terminal DM55_RS02425 IPR012823 Flagellar export FliJ DM55_RS02425 IPR018006 Flagellar FliJ, proteobacteria DM55_RS02430 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DM55_RS02430 IPR003593 AAA+ ATPase domain DM55_RS02430 IPR005714 ATPase, type III secretion system, FliI/YscN DM55_RS02430 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DM55_RS02430 IPR020005 Flagellar export ATPase FliI, clade 1 DM55_RS02430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02430 IPR032463 DM55_RS02430 DM55_RS02435 IPR000563 Flagellar assembly protein FliH DM55_RS02435 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DM55_RS02440 IPR000090 Flagellar motor switch protein FliG DM55_RS02440 IPR011002 Flagellar motor switch protein FliG, alpha-helical DM55_RS02440 IPR023087 DM55_RS02440 DM55_RS02440 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DM55_RS02440 IPR032779 DM55_RS02440 DM55_RS02445 IPR000067 Flagellar M-ring protein FliF DM55_RS02445 IPR006182 Secretory protein YscJ/FliF DM55_RS02445 IPR013556 Flagellar M-ring C-terminal DM55_RS02450 IPR001624 Flagellar hook-basal body complex protein FliE DM55_RS02455 IPR003713 Flagellar protein FliS DM55_RS02460 IPR008622 Flagellar protein FliT DM55_RS02465 IPR021136 Flagellar hook-length control protein-like, C-terminal DM55_RS02470 IPR006135 Type III secretion system substrate exporter DM55_RS02470 IPR029025 Type III secretion system substrate exporter, C-terminal DM55_RS02475 IPR032307 DM55_RS02475 DM55_RS02480 IPR003777 XdhC- CoxI DM55_RS02480 IPR016185 Pre-ATP-grasp domain DM55_RS02480 IPR027051 XdhC Rossmann domain DM55_RS02485 IPR002293 Amino acid/polyamine transporter I DM55_RS02490 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS02490 IPR001789 Signal transduction response regulator, receiver domain DM55_RS02490 IPR011006 CheY-like superfamily DM55_RS02490 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS02490 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS02495 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS02505 IPR001433 Oxidoreductase FAD/NAD(P)-binding DM55_RS02505 IPR008333 Oxidoreductase, FAD-binding domain DM55_RS02505 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS02510 IPR001123 Lysine-type exporter protein (LYSE/YGGA) DM55_RS02515 IPR005135 Endonuclease/exonuclease/phosphatase DM55_RS02530 IPR003593 AAA+ ATPase domain DM55_RS02530 IPR003959 ATPase, AAA-type, core DM55_RS02530 IPR027065 Lon protease DM55_RS02530 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02535 IPR006076 FAD dependent oxidoreductase DM55_RS02535 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS02540 IPR000170 High potential iron-sulphur protein DM55_RS02545 IPR005828 General substrate transporter DM55_RS02545 IPR005829 Sugar transporter, conserved site DM55_RS02545 IPR011701 Major facilitator superfamily DM55_RS02545 IPR020846 Major facilitator superfamily domain DM55_RS02550 IPR000914 Bacterial extracellular solute-binding protein, family 5 DM55_RS02550 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site DM55_RS02550 IPR030678 DM55_RS02550 DM55_RS02555 IPR000515 MetI-like domain DM55_RS02565 IPR003439 ABC transporter-like DM55_RS02565 IPR003593 AAA+ ATPase domain DM55_RS02565 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DM55_RS02565 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02570 IPR003439 ABC transporter-like DM55_RS02570 IPR003593 AAA+ ATPase domain DM55_RS02570 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal DM55_RS02570 IPR017871 ABC transporter, conserved site DM55_RS02570 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS02575 IPR002816 Pheromone shutdown, TraB DM55_RS02580 IPR009323 Protein of unknown function DUF979 DM55_RS02585 IPR010374 Protein of unknown function DUF969 DM55_RS02595 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF DM55_RS02595 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DM55_RS02600 IPR003778 Allophanate hydrolase subunit 2 DM55_RS02600 IPR029000 Cyclophilin-like domain DM55_RS02605 IPR003833 Allophanate hydrolase subunit 1 DM55_RS02605 IPR010016 Sensor histidine kinase inhibitor, KipI family DM55_RS02605 IPR024946 Arginine repressor C-terminal-like domain DM55_RS02605 IPR029000 Cyclophilin-like domain DM55_RS02610 IPR000835 MarR-type HTH domain DM55_RS02610 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS02610 IPR014601 Transcriptional regulator with MarR-type HTH domain DM55_RS02615 IPR002698 5-formyltetrahydrofolate cyclo-ligase DM55_RS02615 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain DM55_RS02620 IPR008258 Lytic transglycosylase-like SLT domain DM55_RS02620 IPR008939 Lytic transglycosylase, superhelical U-shaped DM55_RS02620 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain DM55_RS02620 IPR023346 Lysozyme-like domain DM55_RS02625 IPR016040 NAD(P)-binding domain DM55_RS02630 IPR004045 Glutathione S-transferase, N-terminal DM55_RS02630 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS02630 IPR012336 Thioredoxin-like fold DM55_RS02635 IPR002646 Poly A polymerase, head domain DM55_RS02635 IPR006674 HD domain DM55_RS02635 IPR012006 tRNA nucleotidyltransferase, proteobacteria DM55_RS02635 IPR032828 DM55_RS02635 DM55_RS02640 IPR021070 Killing trait, RebB DM55_RS02645 IPR007809 FlgN-like domain DM55_RS02650 IPR007412 Anti-sigma-28 factor, FlgM DM55_RS02650 IPR031316 DM55_RS02650 DM55_RS02655 IPR013974 SAF domain DM55_RS02655 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal DM55_RS02665 IPR001444 Flagellar basal body rod protein, N-terminal DM55_RS02665 IPR006300 Flagellar basal-body rod protein FlgB DM55_RS02665 IPR019776 Flagellar basal body rod protein, conserved site DM55_RS02670 IPR001444 Flagellar basal body rod protein, N-terminal DM55_RS02670 IPR006299 Flagellar basal-body rod protein FlgC DM55_RS02670 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DM55_RS02670 IPR019776 Flagellar basal body rod protein, conserved site DM55_RS02675 IPR005648 Flagellar hook capping protein DM55_RS02675 IPR025963 FlgD Tudor-like domain DM55_RS02675 IPR025965 FlgD Ig-like domain DM55_RS02680 IPR001444 Flagellar basal body rod protein, N-terminal DM55_RS02680 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DM55_RS02680 IPR011491 Flagellar basal body FlaE DM55_RS02680 IPR019776 Flagellar basal body rod protein, conserved site DM55_RS02680 IPR020013 Fagellar hook-basal body protein, FlgE/F/G DM55_RS02685 IPR001444 Flagellar basal body rod protein, N-terminal DM55_RS02685 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DM55_RS02685 IPR012836 Flagellar basal-body rod FlgF DM55_RS02685 IPR019776 Flagellar basal body rod protein, conserved site DM55_RS02685 IPR020013 Fagellar hook-basal body protein, FlgE/F/G DM55_RS02690 IPR001444 Flagellar basal body rod protein, N-terminal DM55_RS02690 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DM55_RS02690 IPR012834 Flagellar basal-body rod FlgG DM55_RS02690 IPR012836 Flagellar basal-body rod FlgF DM55_RS02690 IPR019776 Flagellar basal body rod protein, conserved site DM55_RS02690 IPR020013 Fagellar hook-basal body protein, FlgE/F/G DM55_RS02695 IPR000527 Flagellar L-ring protein DM55_RS02700 IPR001782 Flagellar P-ring protein DM55_RS02705 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain DM55_RS02705 IPR013377 Flagellar rod assembly protein/muramidase FlgJ DM55_RS02705 IPR019301 Flagellar protein FlgJ, N-terminal DM55_RS02710 IPR009875 PilZ domain DM55_RS02710 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal DM55_RS02710 IPR012349 FMN-binding split barrel DM55_RS02710 IPR023787 Type III secretion system flagellar brake protein YcgR DM55_RS02715 IPR002371 Flagellar hook-associated protein, FlgK DM55_RS02715 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DM55_RS02720 IPR001029 Flagellin, D0/D1 domain DM55_RS02720 IPR013384 Flagellar hook-associated protein 3 DM55_RS02725 IPR006042 Xanthine/uracil permease DM55_RS02725 IPR006043 Xanthine/uracil/vitamin C permease DM55_RS02730 IPR000847 Transcription regulator HTH, LysR DM55_RS02730 IPR005119 LysR, substrate-binding DM55_RS02730 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS02735 IPR003370 Chromate transporter DM55_RS02740 IPR003370 Chromate transporter DM55_RS02740 IPR018181 Heat shock protein 70, conserved site DM55_RS02750 IPR004624 PhnA protein DM55_RS02750 IPR013987 PhnA protein, N-terminal DM55_RS02750 IPR013988 PhnA protein, C-terminal DM55_RS02755 IPR010699 Protein of unknown function DUF1275 DM55_RS02760 IPR002299 Porin, Neisseria sp. type DM55_RS02760 IPR023614 Porin domain DM55_RS02765 IPR029058 Alpha/Beta hydrolase fold DM55_RS02775 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DM55_RS02780 IPR017835 Hopanoid biosynthesis associated glycosyltransferase, HpnI DM55_RS02780 IPR025993 Ceramide glucosyltransferase DM55_RS02780 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS02785 IPR001584 Integrase, catalytic core DM55_RS02785 IPR012337 Ribonuclease H-like domain DM55_RS02785 IPR025948 HTH-like domain DM55_RS02790 IPR002514 Transposase IS3/IS911family DM55_RS02790 IPR009057 Homeodomain-like DM55_RS02795 IPR007049 Carbohydrate-selective porin OprB DM55_RS02810 IPR001046 NRAMP family DM55_RS02825 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM55_RS02825 IPR006324 Glutathione-disulphide reductase DM55_RS02825 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DM55_RS02825 IPR016156 FAD/NAD-linked reductase, dimerisation domain DM55_RS02825 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS02830 IPR001518 Argininosuccinate synthase DM55_RS02830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS02830 IPR018223 Argininosuccinate synthase, conserved site DM55_RS02830 IPR023437 Argininosuccinate synthase, type 2 subfamily DM55_RS02830 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail DM55_RS02830 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body DM55_RS02845 IPR006121 Heavy metal-associated domain, HMA DM55_RS02845 IPR017969 Heavy-metal-associated, conserved site DM55_RS02855 IPR001757 Cation-transporting P-type ATPase DM55_RS02855 IPR007029 YHS domain DM55_RS02855 IPR008250 P-type ATPase, A domain DM55_RS02855 IPR009078 Ferritin-like superfamily DM55_RS02855 IPR011017 TRASH domain DM55_RS02855 IPR018303 P-type ATPase, phosphorylation site DM55_RS02855 IPR023214 HAD-like domain DM55_RS02855 IPR023299 P-type ATPase, cytoplasmic domain N DM55_RS02855 IPR027256 Cation-transporting P-type ATPase, subfamily IB DM55_RS02860 IPR007156 LemA DM55_RS02860 IPR023353 LemA-like domain DM55_RS02865 IPR007621 TPM domain DM55_RS02870 IPR007621 TPM domain DM55_RS02880 IPR003423 Outer membrane efflux protein DM55_RS02885 IPR006143 RND efflux pump, membrane fusion protein DM55_RS02885 IPR021647 Copper binding periplasmic protein CusF DM55_RS02885 IPR032317 DM55_RS02885 DM55_RS02890 IPR001036 Acriflavin resistance protein DM55_RS02890 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA DM55_RS02890 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DM55_RS02895 IPR021647 Copper binding periplasmic protein CusF DM55_RS02905 IPR005468 Avidin/streptavidin DM55_RS02910 IPR001347 Sugar isomerase (SIS) DM55_RS02910 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DM55_RS02910 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS02915 IPR001451 Bacterial transferase hexapeptide repeat DM55_RS02915 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase DM55_RS02915 IPR011004 Trimeric LpxA-like DM55_RS02915 IPR025877 MobA-like NTP transferase domain DM55_RS02915 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS02920 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase DM55_RS02920 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA DM55_RS02920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS02925 IPR006157 Dihydroneopterin aldolase/epimerase domain DM55_RS02930 IPR016040 NAD(P)-binding domain DM55_RS02935 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA DM55_RS02935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS02940 IPR021320 Protein of unknown function DUF2905 DM55_RS02950 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DM55_RS02950 IPR011611 Carbohydrate kinase PfkB DM55_RS02950 IPR029056 Ribokinase-like DM55_RS02955 IPR008928 Six-hairpin glycosidase-like DM55_RS02955 IPR012341 Six-hairpin glycosidase DM55_RS02960 IPR000843 Transcription regulator HTH, LacI DM55_RS02960 IPR010982 Lambda repressor-like, DNA-binding domain DM55_RS02960 IPR028082 Periplasmic binding protein-like I DM55_RS02965 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding DM55_RS02965 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS02965 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS02970 IPR016833 Putative sodium bile acid cotransporter DM55_RS02980 IPR023614 Porin domain DM55_RS02985 IPR002514 Transposase IS3/IS911family DM55_RS02985 IPR009057 Homeodomain-like DM55_RS02990 IPR001584 Integrase, catalytic core DM55_RS02990 IPR012337 Ribonuclease H-like domain DM55_RS02990 IPR025948 HTH-like domain DM55_RS02995 IPR029151 Periplasmic sensor domain-like DM55_RS03005 IPR001952 Alkaline phosphatase DM55_RS03005 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha DM55_RS03005 IPR017850 Alkaline-phosphatase-like, core domain DM55_RS03010 IPR001952 Alkaline phosphatase DM55_RS03010 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha DM55_RS03010 IPR017850 Alkaline-phosphatase-like, core domain DM55_RS03020 IPR005627 Copper homeostasis protein CutC DM55_RS03020 IPR023648 Copper homeostasis CutC domain DM55_RS03025 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB DM55_RS03025 IPR006638 Elongator protein 3/MiaB/NifB DM55_RS03025 IPR007197 Radical SAM DM55_RS03025 IPR010722 Biotin and thiamin synthesis-associated domain DM55_RS03025 IPR013785 Aldolase-type TIM barrel DM55_RS03025 IPR024177 Biotin synthase DM55_RS03030 IPR004472 Dethiobiotin synthase BioD DM55_RS03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03035 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type DM55_RS03035 IPR004839 Aminotransferase, class I/classII DM55_RS03035 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS03035 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS03035 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS03035 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria DM55_RS03040 IPR005814 Aminotransferase class-III DM55_RS03040 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA DM55_RS03040 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS03040 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS03040 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS03045 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain DM55_RS03045 IPR029058 Alpha/Beta hydrolase fold DM55_RS03050 IPR032710 DM55_RS03050 DM55_RS03055 IPR002347 Glucose/ribitol dehydrogenase DM55_RS03055 IPR016040 NAD(P)-binding domain DM55_RS03060 IPR002155 Thiolase DM55_RS03060 IPR016039 Thiolase-like DM55_RS03060 IPR020610 Thiolase, active site DM55_RS03060 IPR020616 Thiolase, N-terminal DM55_RS03060 IPR020617 Thiolase, C-terminal DM55_RS03065 IPR001765 Carbonic anhydrase DM55_RS03065 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site DM55_RS03070 IPR010452 Isocitrate dehydrogenase kinasephosphatase DM55_RS03075 IPR001279 Beta-lactamase-like DM55_RS03080 IPR003439 ABC transporter-like DM55_RS03080 IPR003593 AAA+ ATPase domain DM55_RS03080 IPR017871 ABC transporter, conserved site DM55_RS03080 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03085 IPR000914 Bacterial extracellular solute-binding protein, family 5 DM55_RS03085 IPR030678 DM55_RS03085 DM55_RS03090 IPR000835 MarR-type HTH domain DM55_RS03090 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS03095 IPR002347 Glucose/ribitol dehydrogenase DM55_RS03095 IPR016040 NAD(P)-binding domain DM55_RS03100 IPR002347 Glucose/ribitol dehydrogenase DM55_RS03100 IPR016040 NAD(P)-binding domain DM55_RS03105 IPR001853 DSBA-like thioredoxin domain DM55_RS03105 IPR012336 Thioredoxin-like fold DM55_RS03105 IPR017937 Thioredoxin, conserved site DM55_RS03105 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL DM55_RS03110 IPR007730 Sporulation-related domain DM55_RS03115 IPR001278 Arginine-tRNA ligase DM55_RS03115 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS03115 IPR005148 Arginyl tRNA synthetase N-terminal domain DM55_RS03115 IPR008909 DALR anticodon binding DM55_RS03115 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding DM55_RS03115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS03120 IPR014991 Protein of unknown function DUF1840 DM55_RS03125 IPR008490 Transposase InsH, N-terminal DM55_RS03125 IPR025668 Transposase DDE domain DM55_RS03130 IPR003718 OsmC/Ohr family DM55_RS03130 IPR015946 K homology domain-like, alpha/beta DM55_RS03135 IPR021390 Protein of unknown function DUF3025 DM55_RS03140 IPR002195 Dihydroorotase, conserved site DM55_RS03140 IPR004721 Dihydroorotase homodimeric type DM55_RS03140 IPR006680 Amidohydrolase 1 DM55_RS03140 IPR032466 DM55_RS03140 DM55_RS03145 IPR026869 Putative glutamine amidotransferase type 2 DM55_RS03145 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS03155 IPR002068 Alpha crystallin/Hsp20 domain DM55_RS03155 IPR008978 HSP20-like chaperone DM55_RS03155 IPR031107 DM55_RS03155 DM55_RS03160 IPR002068 Alpha crystallin/Hsp20 domain DM55_RS03160 IPR008978 HSP20-like chaperone DM55_RS03160 IPR031107 DM55_RS03160 DM55_RS03165 IPR011032 GroES (chaperonin 10)-like DM55_RS03165 IPR018369 Chaperonin Cpn10, conserved site DM55_RS03165 IPR020818 Chaperonin Cpn10 DM55_RS03175 IPR003439 ABC transporter-like DM55_RS03175 IPR003593 AAA+ ATPase domain DM55_RS03175 IPR017871 ABC transporter, conserved site DM55_RS03175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03175 IPR030206 DM55_RS03175 DM55_RS03175 IPR030679 DM55_RS03175 DM55_RS03180 IPR000515 MetI-like domain DM55_RS03180 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family DM55_RS03180 IPR030205 DM55_RS03180 DM55_RS03185 IPR000515 MetI-like domain DM55_RS03185 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family DM55_RS03185 IPR030202 DM55_RS03185 DM55_RS03190 IPR001638 Extracellular solute-binding protein, family 3 DM55_RS03195 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase DM55_RS03195 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal DM55_RS03195 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain DM55_RS03195 IPR014362 Glutamate dehydrogenase DM55_RS03195 IPR016040 NAD(P)-binding domain DM55_RS03200 IPR000847 Transcription regulator HTH, LysR DM55_RS03200 IPR005119 LysR, substrate-binding DM55_RS03200 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS03205 IPR011701 Major facilitator superfamily DM55_RS03205 IPR020846 Major facilitator superfamily domain DM55_RS03210 IPR000362 Fumarate lyase family DM55_RS03210 IPR004769 Adenylosuccinate lyase DM55_RS03210 IPR008948 L-Aspartase-like DM55_RS03210 IPR013539 Adenylosuccinate lyase PurB, C-terminal DM55_RS03210 IPR020557 Fumarate lyase, conserved site DM55_RS03210 IPR022761 Fumarate lyase, N-terminal DM55_RS03210 IPR024083 Fumarase/histidase, N-terminal DM55_RS03215 IPR006001 Carbohydrate kinase, thermoresistant glucokinase DM55_RS03215 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03215 IPR031322 DM55_RS03215 DM55_RS03220 IPR003474 Gluconate transporter DM55_RS03225 IPR000887 KDPG/KHG aldolase DM55_RS03225 IPR013785 Aldolase-type TIM barrel DM55_RS03225 IPR031337 DM55_RS03225 DM55_RS03225 IPR031338 DM55_RS03225 DM55_RS03230 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase DM55_RS03230 IPR004786 6-phosphogluconate dehydratase DM55_RS03230 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DM55_RS03230 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site DM55_RS03235 IPR000281 Helix-turn-helix protein RpiR DM55_RS03235 IPR001347 Sugar isomerase (SIS) DM55_RS03235 IPR009057 Homeodomain-like DM55_RS03235 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS03240 IPR005265 Uncharacterised protein family UPF0093 DM55_RS03245 IPR000965 Gamma-glutamyl phosphate reductase GPR DM55_RS03245 IPR012134 Glutamate-5-semialdehyde dehydrogenase DM55_RS03245 IPR015590 Aldehyde dehydrogenase domain DM55_RS03245 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS03245 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS03245 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS03245 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site DM55_RS03250 IPR005790 DNA polymerase III, delta subunit DM55_RS03250 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DM55_RS03250 IPR010372 DNA polymerase III, delta DM55_RS03250 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03250 IPR032780 DM55_RS03250 DM55_RS03255 IPR007485 Lipopolysaccharide assembly, LptE DM55_RS03260 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS03260 IPR002300 Aminoacyl-tRNA synthetase, class Ia DM55_RS03260 IPR002302 Leucine-tRNA ligase DM55_RS03260 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DM55_RS03260 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding DM55_RS03260 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DM55_RS03260 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS03260 IPR015413 Methionyl/Leucyl tRNA synthetase DM55_RS03260 IPR025709 Leucyl-tRNA synthetase, editing domain DM55_RS03265 IPR003400 Biopolymer transport protein ExbD/TolR DM55_RS03270 IPR002898 MotA/TolQ/ExbB proton channel DM55_RS03275 IPR000846 Dihydrodipicolinate reductase, N-terminal DM55_RS03275 IPR016040 NAD(P)-binding domain DM55_RS03275 IPR022663 Dihydrodipicolinate reductase, C-terminal DM55_RS03275 IPR022664 Dihydrodipicolinate reductase, conserved site DM55_RS03275 IPR023940 Dihydrodipicolinate reductase, bacterial DM55_RS03280 IPR007450 Lipoprotein SmpA/OmlA DM55_RS03280 IPR026592 Outer membrane protein assembly factor BamE DM55_RS03285 IPR002481 Ferric-uptake regulator DM55_RS03285 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS03295 IPR005164 Allantoicase DM55_RS03295 IPR008979 Galactose-binding domain-like DM55_RS03295 IPR015908 Allantoicase domain DM55_RS03300 IPR001991 Sodium:dicarboxylate symporter DM55_RS03300 IPR018107 Sodium:dicarboxylate symporter, conserved site DM55_RS03305 IPR000524 Transcription regulator HTH, GntR DM55_RS03305 IPR008920 Transcription regulator FadR/GntR, C-terminal DM55_RS03305 IPR011711 GntR, C-terminal DM55_RS03305 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS03310 IPR000847 Transcription regulator HTH, LysR DM55_RS03310 IPR005119 LysR, substrate-binding DM55_RS03310 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS03315 IPR001765 Carbonic anhydrase DM55_RS03315 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site DM55_RS03320 IPR003712 Cyanate lyase, C-terminal DM55_RS03320 IPR008076 Cyanate hydratase DM55_RS03320 IPR010982 Lambda repressor-like, DNA-binding domain DM55_RS03325 IPR011701 Major facilitator superfamily DM55_RS03325 IPR020846 Major facilitator superfamily domain DM55_RS03330 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I DM55_RS03330 IPR016040 NAD(P)-binding domain DM55_RS03330 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain DM55_RS03330 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain DM55_RS03330 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site DM55_RS03330 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family DM55_RS03335 IPR005474 Transketolase, N-terminal DM55_RS03335 IPR005475 Transketolase-like, pyrimidine-binding domain DM55_RS03335 IPR005478 Transketolase, bacterial-like DM55_RS03335 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II DM55_RS03335 IPR029061 Thiamin diphosphate-binding fold DM55_RS03335 IPR033247 DM55_RS03335 DM55_RS03335 IPR033248 DM55_RS03335 DM55_RS03340 IPR001045 Spermidine/spermine synthases family DM55_RS03340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS03345 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DM55_RS03345 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DM55_RS03350 IPR006700 Ribosomal RNA small subunit methyltransferase E DM55_RS03350 IPR015947 PUA-like domain DM55_RS03350 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS03350 IPR029028 Alpha/beta knot methyltransferases DM55_RS03360 IPR000468 Barstar (barnase inhibitor) DM55_RS03365 IPR000026 Guanine-specific ribonuclease N1/T1 DM55_RS03365 IPR016191 Ribonuclease/ribotoxin DM55_RS03370 IPR002505 Phosphate acetyl/butaryl transferase DM55_RS03370 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase DM55_RS03370 IPR012301 Malic enzyme, N-terminal domain DM55_RS03370 IPR012302 Malic enzyme, NAD-binding DM55_RS03370 IPR016040 NAD(P)-binding domain DM55_RS03370 IPR032683 DM55_RS03370 DM55_RS03375 IPR006283 Thiamine-monophosphate kinase DM55_RS03375 IPR010918 AIR synthase-related protein, C-terminal domain DM55_RS03375 IPR016188 PurM, N-terminal-like DM55_RS03380 IPR007686 YutG/PgpA domain DM55_RS03385 IPR008136 CinA, C-terminal DM55_RS03390 IPR001754 Orotidine 5'-phosphate decarboxylase domain DM55_RS03390 IPR011060 Ribulose-phosphate binding barrel DM55_RS03390 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 DM55_RS03390 IPR013785 Aldolase-type TIM barrel DM55_RS03390 IPR018089 Orotidine 5'-phosphate decarboxylase, active site DM55_RS03395 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase DM55_RS03395 IPR011013 Galactose mutarotase-like domain DM55_RS03395 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup DM55_RS03400 IPR002347 Glucose/ribitol dehydrogenase DM55_RS03400 IPR016040 NAD(P)-binding domain DM55_RS03400 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS03405 IPR001851 ABC transporter, permease DM55_RS03410 IPR003439 ABC transporter-like DM55_RS03410 IPR003593 AAA+ ATPase domain DM55_RS03410 IPR017871 ABC transporter, conserved site DM55_RS03410 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03415 IPR001761 Periplasmic binding protein/LacI sugar binding domain DM55_RS03415 IPR026266 L-arabinose-binding periplasmic protein DM55_RS03415 IPR028082 Periplasmic binding protein-like I DM55_RS03420 IPR002347 Glucose/ribitol dehydrogenase DM55_RS03420 IPR016040 NAD(P)-binding domain DM55_RS03420 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS03425 IPR000887 KDPG/KHG aldolase DM55_RS03425 IPR013785 Aldolase-type TIM barrel DM55_RS03430 IPR007729 2-keto-3-deoxy-galactonokinase DM55_RS03435 IPR005471 Transcription regulator IclR, N-terminal DM55_RS03435 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS03435 IPR014757 Transcription regulator IclR, C-terminal DM55_RS03435 IPR029016 GAF domain-like DM55_RS03440 IPR018247 EF-Hand 1, calcium-binding site DM55_RS03445 IPR001563 Peptidase S10, serine carboxypeptidase DM55_RS03445 IPR029058 Alpha/Beta hydrolase fold DM55_RS03450 IPR001264 Glycosyl transferase, family 51 DM55_RS03450 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase DM55_RS03450 IPR023346 Lysozyme-like domain DM55_RS03455 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DM55_RS03455 IPR011342 Shikimate dehydrogenase DM55_RS03455 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal DM55_RS03455 IPR016040 NAD(P)-binding domain DM55_RS03455 IPR022893 Shikimate, quinate/shikimate dehydrogenase DM55_RS03460 IPR012340 Nucleic acid-binding, OB-fold DM55_RS03465 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA DM55_RS03465 IPR029058 Alpha/Beta hydrolase fold DM55_RS03470 IPR000713 Mur ligase, N-terminal DM55_RS03470 IPR004101 Mur ligase, C-terminal DM55_RS03470 IPR005757 Murein peptide ligase DM55_RS03470 IPR013221 Mur ligase, central DM55_RS03470 IPR016040 NAD(P)-binding domain DM55_RS03480 IPR012336 Thioredoxin-like fold DM55_RS03480 IPR013740 Redoxin DM55_RS03480 IPR017937 Thioredoxin, conserved site DM55_RS03485 IPR001874 Dehydroquinase, class II DM55_RS03485 IPR018509 Dehydroquinase, class II, conserved site DM55_RS03490 IPR000089 Biotin/lipoyl attachment DM55_RS03490 IPR001249 Acetyl-CoA biotin carboxyl carrier DM55_RS03490 IPR001882 Biotin-binding site DM55_RS03490 IPR011053 Single hybrid motif DM55_RS03495 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase DM55_RS03495 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DM55_RS03495 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal DM55_RS03495 IPR005482 Biotin carboxylase, C-terminal DM55_RS03495 IPR011054 Rudiment single hybrid motif DM55_RS03495 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS03495 IPR013816 ATP-grasp fold, subdomain 2 DM55_RS03495 IPR016185 Pre-ATP-grasp domain DM55_RS03500 IPR004498 Ribosomal protein L11 methyltransferase DM55_RS03500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS03505 IPR011723 Zinc finger/thioredoxin putative DM55_RS03505 IPR021834 Protein of unknown function DUF3426 DM55_RS03510 IPR002065 Putative thiol peroxidase Tpx DM55_RS03510 IPR012336 Thioredoxin-like fold DM55_RS03510 IPR013740 Redoxin DM55_RS03510 IPR018219 Thiol peroxidase conserved site DM55_RS03515 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DM55_RS03515 IPR011611 Carbohydrate kinase PfkB DM55_RS03515 IPR029056 Ribokinase-like DM55_RS03520 IPR008816 Glycine zipper 2TM domain DM55_RS03525 IPR005819 Histone H5 DM55_RS03525 IPR009970 Histone H1-like nucleoprotein HC2 DM55_RS03530 IPR000358 Ribonucleotide reductase small subunit DM55_RS03530 IPR009078 Ferritin-like superfamily DM55_RS03530 IPR012348 Ribonucleotide reductase-related DM55_RS03535 IPR000788 Ribonucleotide reductase large subunit, C-terminal DM55_RS03535 IPR005144 ATP-cone DM55_RS03535 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal DM55_RS03535 IPR013346 Ribonucleotide reductase, class I , alpha subunit DM55_RS03535 IPR013509 Ribonucleotide reductase large subunit, N-terminal DM55_RS03540 IPR002502 N-acetylmuramoyl-L-alanine amidase domain DM55_RS03550 IPR002541 Cytochrome c assembly protein DM55_RS03555 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DM55_RS03555 IPR003593 AAA+ ATPase domain DM55_RS03555 IPR004125 Signal recognition particle, SRP54 subunit, M-domain DM55_RS03555 IPR004780 Signal recognition particle protein Ffh DM55_RS03555 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle DM55_RS03555 IPR022941 Signal recognition particle, SRP54 subunit DM55_RS03555 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03560 IPR000836 Phosphoribosyltransferase domain DM55_RS03560 IPR029057 Phosphoribosyltransferase-like DM55_RS03565 IPR002771 Multiple antibiotic resistance (MarC)-related DM55_RS03570 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain DM55_RS03570 IPR002316 Proline-tRNA ligase, class IIa DM55_RS03570 IPR004154 Anticodon-binding DM55_RS03570 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type DM55_RS03570 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DM55_RS03570 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 DM55_RS03575 IPR000086 NUDIX hydrolase domain DM55_RS03575 IPR015797 NUDIX hydrolase domain-like DM55_RS03575 IPR020084 NUDIX hydrolase, conserved site DM55_RS03575 IPR020476 NUDIX hydrolase DM55_RS03575 IPR022927 RNA pyrophosphohydrolase RppH DM55_RS03580 IPR014861 Uncharacterised domain CNP1 DM55_RS03585 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS03585 IPR001057 Glutamate/acetylglutamate kinase DM55_RS03585 IPR002478 PUA domain DM55_RS03585 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase DM55_RS03585 IPR011529 Glutamate 5-kinase DM55_RS03585 IPR015947 PUA-like domain DM55_RS03585 IPR019797 Glutamate 5-kinase, conserved site DM55_RS03590 IPR006073 GTP binding domain DM55_RS03590 IPR006074 GTP1/OBG, conserved site DM55_RS03590 IPR006169 GTP1/OBG domain DM55_RS03590 IPR014100 GTP-binding protein Obg/CgtA DM55_RS03590 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03595 IPR001684 Ribosomal protein L27 DM55_RS03595 IPR018261 Ribosomal protein L27, conserved site DM55_RS03600 IPR001787 Ribosomal protein L21 DM55_RS03600 IPR018258 Ribosomal protein L21, conserved site DM55_RS03600 IPR028909 Ribosomal protein L21-like DM55_RS03605 IPR000092 Polyprenyl synthetase DM55_RS03605 IPR008949 Terpenoid synthase DM55_RS03605 IPR017446 Polyprenyl synthetase-related DM55_RS03620 IPR001584 Integrase, catalytic core DM55_RS03620 IPR012337 Ribonuclease H-like domain DM55_RS03620 IPR025948 HTH-like domain DM55_RS03625 IPR002514 Transposase IS3/IS911family DM55_RS03625 IPR009057 Homeodomain-like DM55_RS03630 IPR000644 CBS domain DM55_RS03630 IPR002550 Domain of unknown function DUF21 DM55_RS03630 IPR005170 Transporter-associated domain DM55_RS03630 IPR016166 FAD-binding, type 2 DM55_RS03630 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 DM55_RS03635 IPR001482 Type II secretion system protein E DM55_RS03635 IPR003593 AAA+ ATPase domain DM55_RS03635 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03640 IPR001992 Type II secretion system conserved site DM55_RS03640 IPR003004 GspF/PilC family DM55_RS03640 IPR018076 Type II secretion system F domain DM55_RS03645 IPR000045 Prepilin type IV endopeptidase, peptidase domain DM55_RS03645 IPR010627 Peptidase A24A, N-terminal DM55_RS03645 IPR014032 Peptidase A24A, prepilin type IV, bacterial DM55_RS03650 IPR001977 Dephospho-CoA kinase DM55_RS03650 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03655 IPR009777 Cell division protein ZapD DM55_RS03655 IPR027462 Z ring-associated protein D, C-terminal domain DM55_RS03660 IPR005584 DNA gyrase inhibitor YacG DM55_RS03660 IPR013088 Zinc finger, NHR/GATA-type DM55_RS03665 IPR000086 NUDIX hydrolase domain DM55_RS03665 IPR015797 NUDIX hydrolase domain-like DM55_RS03665 IPR020084 NUDIX hydrolase, conserved site DM55_RS03665 IPR020476 NUDIX hydrolase DM55_RS03670 IPR003593 AAA+ ATPase domain DM55_RS03670 IPR008533 Domain of unknown function DUF815 DM55_RS03670 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03675 IPR002813 Arginine biosynthesis protein ArgJ DM55_RS03675 IPR016117 ArgJ-like domain DM55_RS03680 IPR000185 Protein translocase subunit SecA DM55_RS03680 IPR004027 SEC-C motif DM55_RS03680 IPR011115 SecA DEAD-like, N-terminal DM55_RS03680 IPR011116 SecA Wing/Scaffold DM55_RS03680 IPR011130 SecA preprotein, cross-linking domain DM55_RS03680 IPR020937 SecA conserved site DM55_RS03680 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03690 IPR007922 Protein of unknown function DUF721/UPF0232 DM55_RS03695 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase DM55_RS03695 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal DM55_RS03695 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal DM55_RS03695 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS03700 IPR012336 Thioredoxin-like fold DM55_RS03700 IPR013740 Redoxin DM55_RS03705 IPR000158 Cell division protein FtsZ DM55_RS03705 IPR003008 Tubulin/FtsZ, GTPase domain DM55_RS03705 IPR008280 Tubulin/FtsZ, C-terminal DM55_RS03705 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain DM55_RS03705 IPR020805 Cell division protein FtsZ, conserved site DM55_RS03705 IPR024757 Cell division protein FtsZ, C-terminal DM55_RS03710 IPR003494 SHS2 domain inserted in FtsA DM55_RS03710 IPR020823 Cell division protein FtsA DM55_RS03715 IPR005548 Cell division protein FtsQ/DivIB DM55_RS03715 IPR013685 Polypeptide-transport-associated, FtsQ-type DM55_RS03715 IPR026579 Cell division protein FtsQ DM55_RS03720 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site DM55_RS03720 IPR005905 D-alanine--D-alanine ligase DM55_RS03720 IPR011095 D-alanine--D-alanine ligase, C-terminal DM55_RS03720 IPR011127 D-alanine--D-alanine ligase, N-terminal domain DM55_RS03720 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS03720 IPR013816 ATP-grasp fold, subdomain 2 DM55_RS03720 IPR016185 Pre-ATP-grasp domain DM55_RS03725 IPR000713 Mur ligase, N-terminal DM55_RS03725 IPR004101 Mur ligase, C-terminal DM55_RS03725 IPR005758 UDP-N-acetylmuramate-alanine ligase DM55_RS03725 IPR013221 Mur ligase, central DM55_RS03725 IPR016040 NAD(P)-binding domain DM55_RS03730 IPR004276 Glycosyl transferase, family 28 DM55_RS03730 IPR006009 N-acetylglucosaminyltransferase, MurG DM55_RS03730 IPR007235 Glycosyl transferase, family 28, C-terminal DM55_RS03735 IPR001182 Cell cycle protein FtsW/RodA DM55_RS03735 IPR013437 Cell division protein FtsW DM55_RS03740 IPR004101 Mur ligase, C-terminal DM55_RS03740 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase DM55_RS03740 IPR013221 Mur ligase, central DM55_RS03740 IPR016040 NAD(P)-binding domain DM55_RS03745 IPR000715 Glycosyl transferase, family 4 DM55_RS03745 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase DM55_RS03745 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site DM55_RS03750 IPR000713 Mur ligase, N-terminal DM55_RS03750 IPR004101 Mur ligase, C-terminal DM55_RS03750 IPR005863 UDP-MurNAc-pentapeptide synthetase DM55_RS03750 IPR013221 Mur ligase, central DM55_RS03755 IPR000713 Mur ligase, N-terminal DM55_RS03755 IPR004101 Mur ligase, C-terminal DM55_RS03755 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase DM55_RS03755 IPR013221 Mur ligase, central DM55_RS03760 IPR001460 Penicillin-binding protein, transpeptidase DM55_RS03760 IPR005311 Penicillin-binding protein, dimerisation domain DM55_RS03760 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS03765 IPR011922 Cell division protein FtsL DM55_RS03765 IPR016040 NAD(P)-binding domain DM55_RS03770 IPR002903 Ribosomal RNA small subunit methyltransferase H DM55_RS03770 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain DM55_RS03770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS03775 IPR003444 MraZ DM55_RS03775 IPR020603 MraZ domain DM55_RS03780 IPR009078 Ferritin-like superfamily DM55_RS03780 IPR011566 Ubiquinone biosynthesis protein Coq7 DM55_RS03780 IPR012347 Ferritin-related DM55_RS03785 IPR001702 Porin, Gram-negative type DM55_RS03785 IPR002299 Porin, Neisseria sp. type DM55_RS03785 IPR023614 Porin domain DM55_RS03790 IPR008490 Transposase InsH, N-terminal DM55_RS03790 IPR025668 Transposase DDE domain DM55_RS03795 IPR000489 Pterin-binding DM55_RS03795 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain DM55_RS03795 IPR004223 Vitamin B12-dependent methionine synthase, activation domain DM55_RS03795 IPR006158 Cobalamin (vitamin B12)-binding domain DM55_RS03795 IPR011005 Dihydropteroate synthase-like DM55_RS03795 IPR011822 Cobalamin-dependent methionine synthase DM55_RS03800 IPR003726 Homocysteine S-methyltransferase DM55_RS03805 IPR021951 Protein of unknown function DUF3567 DM55_RS03810 IPR021457 Protein of unknown function DUF3108 DM55_RS03815 IPR005471 Transcription regulator IclR, N-terminal DM55_RS03815 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS03815 IPR014757 Transcription regulator IclR, C-terminal DM55_RS03815 IPR029016 GAF domain-like DM55_RS03820 IPR011234 Fumarylacetoacetase, C-terminal-related DM55_RS03825 IPR001753 Crotonase superfamily DM55_RS03825 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DM55_RS03825 IPR029045 ClpP/crotonase-like domain DM55_RS03835 IPR002641 Patatin/Phospholipase A2-related DM55_RS03835 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS03845 IPR009078 Ferritin-like superfamily DM55_RS03845 IPR012348 Ribonucleotide reductase-related DM55_RS03850 IPR004821 Cytidyltransferase-like domain DM55_RS03850 IPR011914 RfaE bifunctional protein, domain II DM55_RS03850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS03860 IPR004619 Type III pantothenate kinase DM55_RS03865 IPR003142 Biotin protein ligase, C-terminal DM55_RS03865 IPR004143 Biotin/lipoate A/B protein ligase DM55_RS03865 IPR004408 Biotin--acetyl-CoA-carboxylase ligase DM55_RS03865 IPR008988 Transcriptional repressor, C-terminal DM55_RS03870 IPR006597 Sel1-like DM55_RS03870 IPR011990 Tetratricopeptide-like helical domain DM55_RS03875 IPR006146 5'-Nucleotidase, conserved site DM55_RS03875 IPR006179 5'-Nucleotidase/apyrase DM55_RS03875 IPR008334 5'-Nucleotidase, C-terminal DM55_RS03875 IPR029052 Metallo-dependent phosphatase-like DM55_RS03880 IPR003453 Permease domain DM55_RS03880 IPR030802 DM55_RS03880 DM55_RS03885 IPR003439 ABC transporter-like DM55_RS03885 IPR003593 AAA+ ATPase domain DM55_RS03885 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS03890 IPR003399 Mammalian cell entry-related DM55_RS03895 IPR005586 Protein of unknown function DUF330 DM55_RS03900 IPR006976 VanZ-like DM55_RS03905 IPR012336 Thioredoxin-like fold DM55_RS03910 IPR022742 Putative lysophospholipase DM55_RS03910 IPR029058 Alpha/Beta hydrolase fold DM55_RS03915 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DM55_RS03915 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS03915 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal DM55_RS03915 IPR015956 Penicillin-binding protein-associated DM55_RS03915 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DM55_RS03920 IPR001544 Aminotransferase, class IV DM55_RS03925 IPR007454 Uncharacterised protein family UPF0250 DM55_RS03925 IPR027471 YbeD-like domain DM55_RS03930 IPR000847 Transcription regulator HTH, LysR DM55_RS03930 IPR005119 LysR, substrate-binding DM55_RS03930 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS03935 IPR021317 Protein of unknown function DUF2917 DM55_RS03940 IPR000544 Octanoyltransferase DM55_RS03940 IPR004143 Biotin/lipoate A/B protein ligase DM55_RS03940 IPR020605 Octanoyltransferase, conserved site DM55_RS03945 IPR003698 Lipoyl synthase DM55_RS03945 IPR006638 Elongator protein 3/MiaB/NifB DM55_RS03945 IPR007197 Radical SAM DM55_RS03945 IPR013785 Aldolase-type TIM barrel DM55_RS03945 IPR031691 DM55_RS03945 DM55_RS03950 IPR025668 Transposase DDE domain DM55_RS03960 IPR002514 Transposase IS3/IS911family DM55_RS03960 IPR009057 Homeodomain-like DM55_RS03965 IPR008490 Transposase InsH, N-terminal DM55_RS03975 IPR002085 Alcohol dehydrogenase superfamily, zinc-type DM55_RS03975 IPR016040 NAD(P)-binding domain DM55_RS03980 IPR000101 Gamma-glutamyltranspeptidase DM55_RS03980 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS03990 IPR000847 Transcription regulator HTH, LysR DM55_RS03990 IPR005119 LysR, substrate-binding DM55_RS03990 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS03995 IPR001753 Crotonase superfamily DM55_RS03995 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS03995 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS03995 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS03995 IPR013328 Dehydrogenase, multihelical DM55_RS03995 IPR016040 NAD(P)-binding domain DM55_RS03995 IPR029045 ClpP/crotonase-like domain DM55_RS04000 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS04000 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS04000 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS04000 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS04005 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS04005 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS04005 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS04005 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS04010 IPR003673 CoA-transferase family III DM55_RS04010 IPR023606 CoA-transferase family III domain DM55_RS04015 IPR007436 Protein of unknown function DUF485 DM55_RS04020 IPR001734 Sodium/solute symporter DM55_RS04025 IPR001991 Sodium:dicarboxylate symporter DM55_RS04025 IPR018107 Sodium:dicarboxylate symporter, conserved site DM55_RS04025 IPR023954 C4-dicarboxylate transport protein DM55_RS04035 IPR001789 Signal transduction response regulator, receiver domain DM55_RS04035 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS04035 IPR002197 DNA binding HTH domain, Fis-type DM55_RS04035 IPR003593 AAA+ ATPase domain DM55_RS04035 IPR009057 Homeodomain-like DM55_RS04035 IPR011006 CheY-like superfamily DM55_RS04035 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DM55_RS04035 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS04035 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS04035 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04040 IPR012336 Thioredoxin-like fold DM55_RS04040 IPR013740 Redoxin DM55_RS04050 IPR001031 Thioesterase DM55_RS04050 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS DM55_RS04050 IPR029058 Alpha/Beta hydrolase fold DM55_RS04060 IPR000182 GNAT domain DM55_RS04060 IPR016181 Acyl-CoA N-acyltransferase DM55_RS04065 IPR000523 Magnesium chelatase, ChlI subunit DM55_RS04065 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase DM55_RS04065 IPR003593 AAA+ ATPase domain DM55_RS04065 IPR004482 Mg chelatase-related protein DM55_RS04065 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS04065 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS04065 IPR025158 Mg chelatase-related protein, C-terminal domain DM55_RS04065 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04070 IPR007475 Membrane fusogenic activity DM55_RS04075 IPR002187 Nitrogen regulatory protein PII DM55_RS04075 IPR002332 Nitrogen regulatory protein P-II, urydylation site DM55_RS04075 IPR011322 Nitrogen regulatory PII-like, alpha/beta DM55_RS04075 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DM55_RS04075 IPR017918 Nitrogen regulatory protein PII, conserved site DM55_RS04080 IPR001905 Ammonium transporter DM55_RS04080 IPR018047 Ammonium transporter, conserved site DM55_RS04080 IPR024041 Ammonium transporter AmtB-like domain DM55_RS04080 IPR029020 Ammonium/urea transporter DM55_RS04090 IPR011718 Glutamate--cysteine ligase GshA DM55_RS04090 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS04095 IPR004215 Prokaryotic glutathione synthetase, N-terminal DM55_RS04095 IPR004218 Prokaryotic glutathione synthetase, ATP-binding DM55_RS04095 IPR006284 Glutathione synthetase, prokaryotic DM55_RS04095 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS04095 IPR013816 ATP-grasp fold, subdomain 2 DM55_RS04095 IPR016185 Pre-ATP-grasp domain DM55_RS04100 IPR004701 Phosphotransferase system, mannose-type IIA component DM55_RS04105 IPR000032 Phosphocarrier HPr protein-like DM55_RS04105 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DM55_RS04105 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DM55_RS04110 IPR000121 PEP-utilising enzyme, C-terminal DM55_RS04110 IPR006318 Phosphoenolpyruvate-utilising enzyme DM55_RS04110 IPR008279 PEP-utilising enzyme, mobile domain DM55_RS04110 IPR008731 Phosphotransferase system, enzyme I N-terminal DM55_RS04110 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain DM55_RS04110 IPR018274 PEP-utilising enzyme, active site DM55_RS04110 IPR023151 PEP-utilising enzyme, conserved site DM55_RS04110 IPR024692 Phosphotransferase system, enzyme I DM55_RS04115 IPR000594 UBA/THIF-type NAD/FAD binding fold DM55_RS04115 IPR016040 NAD(P)-binding domain DM55_RS04120 IPR001478 PDZ domain DM55_RS04120 IPR004447 C-terminal-processing peptidase S41A DM55_RS04120 IPR005151 Tail specific protease DM55_RS04120 IPR029045 ClpP/crotonase-like domain DM55_RS04125 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site DM55_RS04125 IPR005952 Phosphoglycerate mutase 1 DM55_RS04125 IPR013078 Histidine phosphatase superfamily, clade-1 DM55_RS04125 IPR029033 Histidine phosphatase superfamily DM55_RS04130 IPR001763 Rhodanese-like domain DM55_RS04135 IPR002109 Glutaredoxin DM55_RS04135 IPR011767 Glutaredoxin active site DM55_RS04135 IPR011900 Glutaredoxin, GrxC DM55_RS04135 IPR012336 Thioredoxin-like fold DM55_RS04135 IPR014025 Glutaredoxin subgroup DM55_RS04140 IPR003708 Bacterial protein export chaperone SecB DM55_RS04145 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal DM55_RS04145 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent DM55_RS04145 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS04145 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal DM55_RS04145 IPR013328 Dehydrogenase, multihelical DM55_RS04145 IPR016040 NAD(P)-binding domain DM55_RS04150 IPR002589 Macro domain DM55_RS04155 IPR001537 tRNA/rRNA methyltransferase, SpoU type DM55_RS04155 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase DM55_RS04155 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS04155 IPR029028 Alpha/beta knot methyltransferases DM55_RS04160 IPR029057 Phosphoribosyltransferase-like DM55_RS04165 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC DM55_RS04165 IPR013216 Methyltransferase type 11 DM55_RS04165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS04170 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane DM55_RS04170 IPR019253 Protein of unknown function DUF2244, transmembrane DM55_RS04175 IPR001505 Copper centre Cu(A) DM55_RS04175 IPR002429 Cytochrome c oxidase subunit II C-terminal DM55_RS04175 IPR006664 Outer membrane protein, bacterial DM55_RS04175 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal DM55_RS04175 IPR008972 Cupredoxin DM55_RS04175 IPR009056 Cytochrome c-like domain DM55_RS04175 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain DM55_RS04175 IPR014222 Cytochrome c oxidase, subunit II DM55_RS04180 IPR000883 Cytochrome c oxidase subunit I DM55_RS04180 IPR014241 Cytochrome c oxidase, subunit I bacterial type DM55_RS04180 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site DM55_RS04180 IPR023616 Cytochrome c oxidase, subunit I domain DM55_RS04190 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 DM55_RS04190 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain DM55_RS04195 IPR021344 Protein of unknown function DUF2970 DM55_RS04200 IPR000298 Cytochrome c oxidase subunit III domain DM55_RS04200 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle DM55_RS04200 IPR024791 Cytochrome c oxidase subunit III DM55_RS04205 IPR021313 Protein of unknown function DUF2909 DM55_RS04210 IPR002994 Surfeit locus 1/Shy1 DM55_RS04215 IPR012336 Thioredoxin-like fold DM55_RS04220 IPR003780 COX15/CtaA family DM55_RS04225 IPR000537 UbiA prenyltransferase family DM55_RS04225 IPR006369 Protohaem IX farnesyltransferase DM55_RS04225 IPR030470 DM55_RS04225 DM55_RS04230 IPR003782 Copper chaperone SCO1/SenC DM55_RS04230 IPR012336 Thioredoxin-like fold DM55_RS04235 IPR005545 YCII-related DM55_RS04235 IPR011008 Dimeric alpha-beta barrel DM55_RS04240 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS04240 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS04240 IPR033480 DM55_RS04240 DM55_RS04245 IPR004872 Lipoprotein NlpA family DM55_RS04250 IPR008490 Transposase InsH, N-terminal DM55_RS04250 IPR025668 Transposase DDE domain DM55_RS04255 IPR013126 Heat shock protein 70 family DM55_RS04260 IPR000415 Nitroreductase-like DM55_RS04260 IPR029479 Nitroreductase DM55_RS04265 IPR011701 Major facilitator superfamily DM55_RS04265 IPR020846 Major facilitator superfamily domain DM55_RS04270 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS04270 IPR009057 Homeodomain-like DM55_RS04270 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DM55_RS04270 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS04275 IPR009858 Protein of unknown function DUF1415 DM55_RS04280 IPR025714 Methyltransferase domain DM55_RS04280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS04285 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DM55_RS04285 IPR007848 Methyltransferase small domain DM55_RS04285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS04290 IPR002656 Acyltransferase 3 DM55_RS04295 IPR004864 Late embryogenesis abundant protein, LEA-14 DM55_RS04295 IPR013783 Immunoglobulin-like fold DM55_RS04295 IPR013990 Water stress and hypersensitive response domain DM55_RS04300 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DM55_RS04300 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal DM55_RS04315 IPR003997 RTX secretion protein D, Gram-negative bacteria DM55_RS04320 IPR003439 ABC transporter-like DM55_RS04320 IPR003593 AAA+ ATPase domain DM55_RS04320 IPR005074 Peptidase C39, bacteriocin processing DM55_RS04320 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS04320 IPR017871 ABC transporter, conserved site DM55_RS04320 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04325 IPR003423 Outer membrane efflux protein DM55_RS04325 IPR028351 Cyclolysin transport protein CyaE DM55_RS04335 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain DM55_RS04345 IPR009612 ImcF-related DM55_RS04345 IPR010623 Domain of unknown function DUF1215 DM55_RS04345 IPR017731 Type VI secretion system, IcmF DM55_RS04345 IPR025743 ImcF-related, N-terminal domain DM55_RS04345 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04350 IPR017748 Type VI secretion system-associated, BMAA0400 DM55_RS04355 IPR006664 Outer membrane protein, bacterial DM55_RS04355 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal DM55_RS04360 IPR010657 ImpA, N-terminal DM55_RS04360 IPR017740 Type VI secretion system-associated, ImpA DM55_RS04370 IPR010732 Protein of unknown function DUF1305 DM55_RS04375 IPR010272 Type VI secretion system, VCA0110 DM55_RS04380 IPR007048 GpW/Gp25/anti-adapter protein IraD DM55_RS04380 IPR017737 Type VI secretion system, lysozyme-related protein DM55_RS04385 IPR001584 Integrase, catalytic core DM55_RS04385 IPR012337 Ribonuclease H-like domain DM55_RS04385 IPR025948 HTH-like domain DM55_RS04390 IPR002514 Transposase IS3/IS911family DM55_RS04390 IPR009057 Homeodomain-like DM55_RS04395 IPR004136 2-nitropropane dioxygenase, NPD DM55_RS04395 IPR013785 Aldolase-type TIM barrel DM55_RS04400 IPR002925 Dienelactone hydrolase DM55_RS04400 IPR029058 Alpha/Beta hydrolase fold DM55_RS04405 IPR000120 Amidase DM55_RS04405 IPR020556 Amidase, conserved site DM55_RS04405 IPR023631 Amidase signature domain DM55_RS04410 IPR003171 Methylenetetrahydrofolate reductase DM55_RS04410 IPR004620 5,10-methylenetetrahydrofolate reductase DM55_RS04410 IPR029041 FAD-linked oxidoreductase-like DM55_RS04415 IPR007165 Membrane protein of unknown function DM55_RS04420 IPR000043 Adenosylhomocysteinase DM55_RS04420 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DM55_RS04420 IPR016040 NAD(P)-binding domain DM55_RS04420 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site DM55_RS04425 IPR000943 RNA polymerase sigma-70 DM55_RS04425 IPR007624 RNA polymerase sigma-70 region 3 DM55_RS04425 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS04425 IPR007630 RNA polymerase sigma-70 region 4 DM55_RS04425 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS04425 IPR012845 RNA polymerase sigma factor, FliA/WhiG DM55_RS04425 IPR013324 RNA polymerase sigma factor, region 3/4 DM55_RS04425 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS04425 IPR014284 RNA polymerase sigma-70 like domain DM55_RS04425 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE DM55_RS04425 IPR028617 RNA polymerase sigma factor FliA DM55_RS04430 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DM55_RS04430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04440 IPR001712 Type III secretion system FHIPEP DM55_RS04440 IPR006301 Flagellar biosynthesis protein FlhA DM55_RS04440 IPR025505 FHIPEP conserved site DM55_RS04445 IPR006135 Type III secretion system substrate exporter DM55_RS04445 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB DM55_RS04445 IPR029025 Type III secretion system substrate exporter, C-terminal DM55_RS04450 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase DM55_RS04450 IPR028973 3-demethylubiquinone-9 3-methyltransferase DM55_RS04450 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DM55_RS04455 IPR021847 Protein of unknown function DUF3443 DM55_RS04460 IPR021267 Protein of unknown function DUF2844 DM55_RS04465 IPR007439 Chemotaxis phosphatase, CheZ DM55_RS04470 IPR001789 Signal transduction response regulator, receiver domain DM55_RS04470 IPR011006 CheY-like superfamily DM55_RS04475 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase DM55_RS04475 IPR001789 Signal transduction response regulator, receiver domain DM55_RS04475 IPR008248 Signal transduction response regulator, chemotaxis, CheB DM55_RS04475 IPR011006 CheY-like superfamily DM55_RS04480 IPR005659 Chemoreceptor glutamine deamidase CheD DM55_RS04480 IPR011324 Cytotoxic necrotizing factor-like, catalytic DM55_RS04485 IPR000780 MCP methyltransferase, CheR-type DM55_RS04485 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal DM55_RS04485 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DM55_RS04485 IPR026024 Chemotaxis protein methyltransferase CheR DM55_RS04485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS04490 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding DM55_RS04490 IPR003660 HAMP linker domain DM55_RS04490 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS04490 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS04495 IPR002545 CheW-like protein DM55_RS04505 IPR001789 Signal transduction response regulator, receiver domain DM55_RS04505 IPR011006 CheY-like superfamily DM55_RS04510 IPR025713 Motility protein B, N-terminal domain DM55_RS04515 IPR000540 Flagellar motor protein MotA, conserved site DM55_RS04515 IPR002898 MotA/TolQ/ExbB proton channel DM55_RS04515 IPR022522 Flagellar motor stator, MotA DM55_RS04520 IPR007944 Flagellar transcriptional activator FlhC DM55_RS04525 IPR023559 Flagellar transcriptional activator FlhD DM55_RS04530 IPR001296 Glycosyl transferase, family 1 DM55_RS04530 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain DM55_RS04535 IPR001801 Histone-like protein H-NS DM55_RS04535 IPR027444 Histone-like protein H-NS, C-terminal domain DM55_RS04540 IPR000425 Major intrinsic protein DM55_RS04540 IPR022357 Major intrinsic protein, conserved site DM55_RS04540 IPR023271 Aquaporin-like DM55_RS04540 IPR023743 Aquaporin Z DM55_RS04545 IPR000150 Cof protein DM55_RS04545 IPR006379 HAD-superfamily hydrolase, subfamily IIB DM55_RS04545 IPR023214 HAD-like domain DM55_RS04550 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type DM55_RS04555 IPR005019 Methyladenine glycosylase DM55_RS04555 IPR011257 DNA glycosylase DM55_RS04560 IPR001911 Ribosomal protein S21 DM55_RS04565 IPR001029 Flagellin, D0/D1 domain DM55_RS04565 IPR001492 Flagellin DM55_RS04565 IPR022578 Flagellin, domain of unknown function DM55_RS04570 IPR003481 Flagellar hook-associated protein 2, N-terminal DM55_RS04570 IPR005427 Salmonella/Shigella invasin protein C DM55_RS04570 IPR010809 Flagellar hook-associated 2, C-terminal DM55_RS04570 IPR010810 Flagellin hook, IN motif DM55_RS04575 IPR008622 Flagellar protein FliT DM55_RS04580 IPR011990 Tetratricopeptide-like helical domain DM55_RS04580 IPR019734 Tetratricopeptide repeat DM55_RS04580 IPR029489 O-GlcNAc transferase, C-terminal DM55_RS04585 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DM55_RS04585 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS04585 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS04585 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS04590 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal DM55_RS04590 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM55_RS04590 IPR016039 Thiolase-like DM55_RS04595 IPR009081 Acyl carrier protein-like DM55_RS04600 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal DM55_RS04600 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM55_RS04600 IPR016039 Thiolase-like DM55_RS04605 IPR002347 Glucose/ribitol dehydrogenase DM55_RS04605 IPR016040 NAD(P)-binding domain DM55_RS04605 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS04610 IPR001451 Bacterial transferase hexapeptide repeat DM55_RS04610 IPR011004 Trimeric LpxA-like DM55_RS04610 IPR016185 Pre-ATP-grasp domain DM55_RS04610 IPR020019 Sialic acid O-acyltransferase, NeuD DM55_RS04615 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain DM55_RS04615 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site DM55_RS04615 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DM55_RS04620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS04630 IPR001123 Lysine-type exporter protein (LYSE/YGGA) DM55_RS04635 IPR007312 Phosphoesterase DM55_RS04635 IPR017768 Acid phosphatase, AcpA DM55_RS04635 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha DM55_RS04635 IPR017850 Alkaline-phosphatase-like, core domain DM55_RS04640 IPR008517 Protein of unknown function DUF799 DM55_RS04645 IPR014508 Uncharacterised conserved protein, TPR-like repeat DM55_RS04650 IPR005534 Curli production assembly/transport component CsgG DM55_RS04650 IPR007195 TolB, N-terminal DM55_RS04660 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS04660 IPR000639 Epoxide hydrolase-like DM55_RS04660 IPR029058 Alpha/Beta hydrolase fold DM55_RS04665 IPR003660 HAMP linker domain DM55_RS04665 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS04665 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS04665 IPR029151 Periplasmic sensor domain-like DM55_RS04665 IPR033479 DM55_RS04665 DM55_RS04675 IPR006094 FAD linked oxidase, N-terminal DM55_RS04675 IPR012951 Berberine/berberine-like DM55_RS04675 IPR016166 FAD-binding, type 2 DM55_RS04675 IPR016167 FAD-binding, type 2, subdomain 1 DM55_RS04680 IPR004302 Chitin-binding, domain 3 DM55_RS04680 IPR014756 Immunoglobulin E-set DM55_RS04690 IPR002514 Transposase IS3/IS911family DM55_RS04690 IPR009057 Homeodomain-like DM55_RS04705 IPR000709 Leu/Ile/Val-binding protein DM55_RS04705 IPR028081 Leucine-binding protein domain DM55_RS04705 IPR028082 Periplasmic binding protein-like I DM55_RS04710 IPR011701 Major facilitator superfamily DM55_RS04710 IPR020846 Major facilitator superfamily domain DM55_RS04715 IPR012349 FMN-binding split barrel DM55_RS04720 IPR001801 Histone-like protein H-NS DM55_RS04720 IPR027444 Histone-like protein H-NS, C-terminal domain DM55_RS04725 IPR002524 Cation efflux protein DM55_RS04725 IPR027469 Cation efflux protein transmembrane domain DM55_RS04725 IPR027470 Cation efflux protein cytoplasmic domain DM55_RS04730 IPR000485 AsnC-type HTH domain DM55_RS04730 IPR011008 Dimeric alpha-beta barrel DM55_RS04730 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS04730 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DM55_RS04730 IPR019887 Transcription regulator AsnC-type, C-terminal DM55_RS04730 IPR019888 Transcription regulator AsnC-type DM55_RS04735 IPR012337 Ribonuclease H-like domain DM55_RS04740 IPR001279 Beta-lactamase-like DM55_RS04745 IPR009009 RlpA-like double-psi beta-barrel domain DM55_RS04745 IPR012997 Rare lipoprotein A, bacterial DM55_RS04750 IPR008490 Transposase InsH, N-terminal DM55_RS04750 IPR025668 Transposase DDE domain DM55_RS04755 IPR000119 Histone-like bacterial DNA-binding protein DM55_RS04755 IPR010992 Integration host factor (IHF)-like DNA-binding domain DM55_RS04755 IPR020816 Histone-like DNA-binding protein, conserved site DM55_RS04760 IPR006076 FAD dependent oxidoreductase DM55_RS04760 IPR008471 MnmC-like methyltransferase DM55_RS04760 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal DM55_RS04760 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC DM55_RS04760 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS04760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS04765 IPR006153 Cation/H+ exchanger DM55_RS04770 IPR006336 Glutamate--cysteine ligase, GCS2 DM55_RS04770 IPR011793 Carboxylate-amine ligase, predicted DM55_RS04775 IPR000835 MarR-type HTH domain DM55_RS04775 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS04780 IPR017926 Glutamine amidotransferase DM55_RS04780 IPR029062 Class I glutamine amidotransferase-like DM55_RS04785 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal DM55_RS04785 IPR013785 Aldolase-type TIM barrel DM55_RS04795 IPR001214 SET domain DM55_RS04800 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS04800 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS04800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS04800 IPR013727 Two-component sensor kinase N-terminal DM55_RS04805 IPR001789 Signal transduction response regulator, receiver domain DM55_RS04805 IPR001867 Signal transduction response regulator, C-terminal DM55_RS04805 IPR011006 CheY-like superfamily DM55_RS04805 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS04805 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS04810 IPR022191 Protein of unknown function DUF3717 DM55_RS04815 IPR001533 Transcriptional coactivator/pterin dehydratase DM55_RS04820 IPR001273 Aromatic amino acid hydroxylase DM55_RS04820 IPR005960 Phenylalanine-4-hydroxylase, monomeric form DM55_RS04820 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site DM55_RS04820 IPR019774 Aromatic amino acid hydroxylase, C-terminal DM55_RS04825 IPR000485 AsnC-type HTH domain DM55_RS04825 IPR011008 Dimeric alpha-beta barrel DM55_RS04825 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS04825 IPR019887 Transcription regulator AsnC-type, C-terminal DM55_RS04825 IPR019888 Transcription regulator AsnC-type DM55_RS04830 IPR023577 CYTH-like domain DM55_RS04830 IPR033469 DM55_RS04830 DM55_RS04835 IPR000847 Transcription regulator HTH, LysR DM55_RS04835 IPR005119 LysR, substrate-binding DM55_RS04835 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS04840 IPR010061 Methylmalonate-semialdehyde dehydrogenase DM55_RS04840 IPR015590 Aldehyde dehydrogenase domain DM55_RS04840 IPR016160 Aldehyde dehydrogenase, cysteine active site DM55_RS04840 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS04840 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS04840 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS04845 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal DM55_RS04845 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal DM55_RS04845 IPR012132 Glucose-methanol-choline oxidoreductase DM55_RS04845 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS04850 IPR003439 ABC transporter-like DM55_RS04850 IPR003593 AAA+ ATPase domain DM55_RS04850 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04850 IPR032823 DM55_RS04850 DM55_RS04855 IPR003439 ABC transporter-like DM55_RS04855 IPR003593 AAA+ ATPase domain DM55_RS04855 IPR017871 ABC transporter, conserved site DM55_RS04855 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04860 IPR028081 Leucine-binding protein domain DM55_RS04860 IPR028082 Periplasmic binding protein-like I DM55_RS04865 IPR001851 ABC transporter, permease DM55_RS04870 IPR001851 ABC transporter, permease DM55_RS04880 IPR028081 Leucine-binding protein domain DM55_RS04880 IPR028082 Periplasmic binding protein-like I DM55_RS04885 IPR001851 ABC transporter, permease DM55_RS04890 IPR001851 ABC transporter, permease DM55_RS04890 IPR003439 ABC transporter-like DM55_RS04890 IPR003593 AAA+ ATPase domain DM55_RS04890 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04890 IPR032823 DM55_RS04890 DM55_RS04895 IPR003439 ABC transporter-like DM55_RS04895 IPR003593 AAA+ ATPase domain DM55_RS04895 IPR017871 ABC transporter, conserved site DM55_RS04895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04900 IPR002218 Glucose-inhibited division protein A-related DM55_RS04900 IPR004416 Glucose-inhibited division protein A DM55_RS04900 IPR020595 Glucose-inhibited division protein A-related, conserved site DM55_RS04900 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS04900 IPR026904 GidA associated domain 3 DM55_RS04905 IPR003682 rRNA small subunit methyltransferase G DM55_RS04905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS04910 IPR025669 AAA domain DM55_RS04910 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04915 IPR003115 ParB/Sulfiredoxin DM55_RS04915 IPR004437 ParB/RepB/Spo0J partition protein family DM55_RS04920 IPR004680 Citrate transporter-like domain DM55_RS04925 IPR005598 ATP synthase protein I DM55_RS04930 IPR000568 ATPase, F0 complex, subunit A DM55_RS04930 IPR023011 ATPase, F0 complex, subunit A, active site DM55_RS04935 IPR000454 ATPase, F0 complex, subunit C DM55_RS04935 IPR002379 V-ATPase proteolipid subunit C-like domain DM55_RS04935 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast DM55_RS04935 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site DM55_RS04940 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast DM55_RS04940 IPR005864 ATPase, F0 complex, subunit B, bacterial DM55_RS04940 IPR028987 F-type ATP synthase subunit B-like, membrane domain DM55_RS04945 IPR000711 ATPase, OSCP/delta subunit DM55_RS04945 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain DM55_RS04950 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DM55_RS04950 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal DM55_RS04950 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain DM55_RS04950 IPR005294 ATPase, F1 complex, alpha subunit DM55_RS04950 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DM55_RS04950 IPR023366 ATP synthase subunit alpha-like domain DM55_RS04950 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04955 IPR000131 ATPase, F1 complex, gamma subunit DM55_RS04955 IPR023632 ATPase, F1 complex, gamma subunit conserved site DM55_RS04955 IPR023633 ATPase, F1 complex, gamma subunit domain DM55_RS04960 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain DM55_RS04960 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal DM55_RS04960 IPR003593 AAA+ ATPase domain DM55_RS04960 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain DM55_RS04960 IPR005722 ATPase, F1 complex, beta subunit DM55_RS04960 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site DM55_RS04960 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal DM55_RS04960 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS04965 IPR001469 ATPase, F1 complex, delta/epsilon subunit DM55_RS04965 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal DM55_RS04965 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain DM55_RS04970 IPR000873 AMP-dependent synthetase/ligase DM55_RS04970 IPR020845 AMP-binding, conserved site DM55_RS04970 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS04975 IPR003781 CoA-binding DM55_RS04975 IPR016040 NAD(P)-binding domain DM55_RS04980 IPR001638 Extracellular solute-binding protein, family 3 DM55_RS04980 IPR018313 Extracellular solute-binding protein, family 3, conserved site DM55_RS04985 IPR000257 Uroporphyrinogen decarboxylase (URO-D) DM55_RS04985 IPR006361 Uroporphyrinogen decarboxylase HemE DM55_RS04990 IPR001650 Helicase, C-terminal DM55_RS04990 IPR005259 Primosomal protein n DM55_RS04990 IPR011545 DEAD/DEAH box helicase domain DM55_RS04990 IPR014001 Helicase, superfamily 1/2, ATP-binding domain DM55_RS04990 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05000 IPR002872 Proline dehydrogenase domain DM55_RS05000 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 DM55_RS05000 IPR010985 Ribbon-helix-helix DM55_RS05000 IPR015590 Aldehyde dehydrogenase domain DM55_RS05000 IPR016160 Aldehyde dehydrogenase, cysteine active site DM55_RS05000 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS05000 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS05000 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS05000 IPR024082 Proline dehydrogenase PutA, domain II DM55_RS05000 IPR024089 Proline dehydrogenase PutA, domain I/II DM55_RS05000 IPR024090 Proline dehydrogenase PutA, domain I DM55_RS05000 IPR025703 Bifunctional protein PutA DM55_RS05000 IPR029041 FAD-linked oxidoreductase-like DM55_RS05005 IPR000709 Leu/Ile/Val-binding protein DM55_RS05005 IPR028081 Leucine-binding protein domain DM55_RS05005 IPR028082 Periplasmic binding protein-like I DM55_RS05010 IPR000873 AMP-dependent synthetase/ligase DM55_RS05010 IPR020845 AMP-binding, conserved site DM55_RS05010 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS05015 IPR006089 Acyl-CoA dehydrogenase, conserved site DM55_RS05015 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS05015 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS05015 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS05020 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS05020 IPR009057 Homeodomain-like DM55_RS05020 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DM55_RS05020 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS05020 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DM55_RS05025 IPR004839 Aminotransferase, class I/classII DM55_RS05025 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS05025 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS05025 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS05030 IPR001638 Extracellular solute-binding protein, family 3 DM55_RS05030 IPR018313 Extracellular solute-binding protein, family 3, conserved site DM55_RS05045 IPR004113 FAD-linked oxidase, C-terminal DM55_RS05045 IPR016164 FAD-linked oxidase-like, C-terminal DM55_RS05045 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DM55_RS05050 IPR005149 Transcription regulator PadR N-terminal DM55_RS05050 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS05055 IPR000551 MerR-type HTH domain DM55_RS05055 IPR009061 DNA binding domain, putative DM55_RS05055 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator DM55_RS05060 IPR001757 Cation-transporting P-type ATPase DM55_RS05060 IPR006121 Heavy metal-associated domain, HMA DM55_RS05060 IPR008250 P-type ATPase, A domain DM55_RS05060 IPR018303 P-type ATPase, phosphorylation site DM55_RS05060 IPR023214 HAD-like domain DM55_RS05060 IPR023299 P-type ATPase, cytoplasmic domain N DM55_RS05060 IPR027256 Cation-transporting P-type ATPase, subfamily IB DM55_RS05065 IPR025874 Double zinc ribbon DM55_RS05075 IPR008910 Conserved TM helix DM55_RS05085 IPR002656 Acyltransferase 3 DM55_RS05095 IPR002293 Amino acid/polyamine transporter I DM55_RS05095 IPR004757 Ethanolamine permease DM55_RS05100 IPR008490 Transposase InsH, N-terminal DM55_RS05100 IPR025668 Transposase DDE domain DM55_RS05115 IPR002585 Cytochrome d ubiquinol oxidase, subunit I DM55_RS05120 IPR003317 Cytochrome d ubiquinol oxidase, subunit II DM55_RS05125 IPR011724 Cyd operon protein YbgT DM55_RS05125 IPR012994 Membrane bound YbgT-like DM55_RS05135 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain DM55_RS05135 IPR008965 Carbohydrate-binding domain DM55_RS05135 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain DM55_RS05135 IPR013781 Glycoside hydrolase, catalytic domain DM55_RS05135 IPR014756 Immunoglobulin E-set DM55_RS05135 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal DM55_RS05135 IPR015883 Glycoside hydrolase family 20, catalytic core DM55_RS05135 IPR017853 Glycoside hydrolase, superfamily DM55_RS05135 IPR018247 EF-Hand 1, calcium-binding site DM55_RS05135 IPR025705 Beta-hexosaminidase DM55_RS05135 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like DM55_RS05140 IPR001996 Phosphotransferase system, IIB component, type 1 DM55_RS05140 IPR003352 Phosphotransferase system, EIIC DM55_RS05140 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component DM55_RS05140 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site DM55_RS05145 IPR000032 Phosphocarrier HPr protein-like DM55_RS05145 IPR000121 PEP-utilising enzyme, C-terminal DM55_RS05145 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DM55_RS05145 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 DM55_RS05145 IPR006318 Phosphoenolpyruvate-utilising enzyme DM55_RS05145 IPR008279 PEP-utilising enzyme, mobile domain DM55_RS05145 IPR008731 Phosphotransferase system, enzyme I N-terminal DM55_RS05145 IPR011055 Duplicated hybrid motif DM55_RS05145 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain DM55_RS05145 IPR018274 PEP-utilising enzyme, active site DM55_RS05145 IPR023151 PEP-utilising enzyme, conserved site DM55_RS05150 IPR001347 Sugar isomerase (SIS) DM55_RS05155 IPR003764 N-acetylglucosamine-6-phosphate deacetylase DM55_RS05155 IPR006680 Amidohydrolase 1 DM55_RS05155 IPR011059 Metal-dependent hydrolase, composite domain DM55_RS05155 IPR032466 DM55_RS05155 DM55_RS05160 IPR000524 Transcription regulator HTH, GntR DM55_RS05160 IPR011663 UbiC transcription regulator-associated DM55_RS05160 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS05160 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DM55_RS05165 IPR000847 Transcription regulator HTH, LysR DM55_RS05165 IPR005119 LysR, substrate-binding DM55_RS05165 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS05170 IPR000873 AMP-dependent synthetase/ligase DM55_RS05170 IPR020845 AMP-binding, conserved site DM55_RS05170 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS05180 IPR009081 Acyl carrier protein-like DM55_RS05195 IPR009078 Ferritin-like superfamily DM55_RS05195 IPR012348 Ribonucleotide reductase-related DM55_RS05195 IPR025859 P-aminobenzoate N-oxygenase AurF DM55_RS05200 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM55_RS05200 IPR016039 Thiolase-like DM55_RS05205 IPR000183 Ornithine/DAP/Arg decarboxylase DM55_RS05205 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DM55_RS05205 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal DM55_RS05205 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DM55_RS05205 IPR029066 PLP-binding barrel DM55_RS05210 IPR000873 AMP-dependent synthetase/ligase DM55_RS05210 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated DM55_RS05210 IPR020845 AMP-binding, conserved site DM55_RS05210 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS05215 IPR016039 Thiolase-like DM55_RS05220 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS05220 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS05220 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS05220 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria DM55_RS05220 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DM55_RS05225 IPR002020 Citrate synthase-like DM55_RS05225 IPR016142 Citrate synthase-like, large alpha subdomain DM55_RS05225 IPR016143 Citrate synthase-like, small alpha subdomain DM55_RS05230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS05235 IPR003819 Taurine catabolism dioxygenase TauD/TfdA DM55_RS05240 IPR003439 ABC transporter-like DM55_RS05240 IPR003593 AAA+ ATPase domain DM55_RS05240 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05255 IPR004637 2,4-diaminobutyrate 4-transaminase DM55_RS05255 IPR005814 Aminotransferase class-III DM55_RS05255 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS05255 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS05255 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS05260 IPR005804 Fatty acid desaturase, type 1 DM55_RS05265 IPR011701 Major facilitator superfamily DM55_RS05265 IPR020846 Major facilitator superfamily domain DM55_RS05275 IPR003141 Polymerase/histidinol phosphatase, N-terminal DM55_RS05275 IPR004013 PHP, C-terminal DM55_RS05275 IPR004805 DNA polymerase III, alpha subunit DM55_RS05275 IPR011708 Bacterial DNA polymerase III, alpha subunit DM55_RS05275 IPR016195 Polymerase/histidinol phosphatase-like DM55_RS05275 IPR023073 DNA polymerase, error-prone DM55_RS05275 IPR029460 DNA polymerase, helix-hairpin-helix motif DM55_RS05280 IPR001126 DNA-repair protein, UmuC-like DM55_RS05285 IPR017166 Uncharacterised conserved protein UCP037290 DM55_RS05285 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05290 IPR003439 ABC transporter-like DM55_RS05290 IPR003593 AAA+ ATPase domain DM55_RS05290 IPR017871 ABC transporter, conserved site DM55_RS05290 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05295 IPR001851 ABC transporter, permease DM55_RS05300 IPR007487 ABC transporter, substrate-binding protein DM55_RS05300 IPR028082 Periplasmic binding protein-like I DM55_RS05305 IPR008490 Transposase InsH, N-terminal DM55_RS05305 IPR025668 Transposase DDE domain DM55_RS05310 IPR000943 RNA polymerase sigma-70 DM55_RS05310 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS05310 IPR007630 RNA polymerase sigma-70 region 4 DM55_RS05310 IPR009042 RNA polymerase sigma-70 region 1.2 DM55_RS05310 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS05310 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria DM55_RS05310 IPR013324 RNA polymerase sigma factor, region 3/4 DM55_RS05310 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS05310 IPR014284 RNA polymerase sigma-70 like domain DM55_RS05315 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel DM55_RS05315 IPR018550 Lipid A 3-O-deacylase-related DM55_RS05320 IPR027843 Domain of unknown function DUF4440 DM55_RS05320 IPR032710 DM55_RS05320 DM55_RS05325 IPR000891 Pyruvate carboxyltransferase DM55_RS05325 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site DM55_RS05325 IPR005668 2-isopropylmalate synthase DM55_RS05325 IPR013785 Aldolase-type TIM barrel DM55_RS05330 IPR000182 GNAT domain DM55_RS05330 IPR016181 Acyl-CoA N-acyltransferase DM55_RS05335 IPR000312 Glycosyl transferase, family 3 DM55_RS05335 IPR017459 Glycosyl transferase family 3, N-terminal domain DM55_RS05340 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DM55_RS05340 IPR006656 Molybdopterin oxidoreductase DM55_RS05340 IPR006657 Molydopterin dinucleotide-binding domain DM55_RS05340 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DM55_RS05340 IPR007419 BFD-like [2Fe-2S]-binding domain DM55_RS05340 IPR009010 Aspartate decarboxylase-like domain DM55_RS05340 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DM55_RS05345 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DM55_RS05350 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DM55_RS05350 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site DM55_RS05350 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DM55_RS05350 IPR007419 BFD-like [2Fe-2S]-binding domain DM55_RS05350 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB DM55_RS05350 IPR017121 Nitrite reductase [NAD(P)H], large subunit DM55_RS05350 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS05360 IPR004045 Glutathione S-transferase, N-terminal DM55_RS05360 IPR005955 Maleylacetoacetate isomerase DM55_RS05360 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS05360 IPR012336 Thioredoxin-like fold DM55_RS05365 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DM55_RS05365 IPR003593 AAA+ ATPase domain DM55_RS05365 IPR004390 Signal-recognition particle receptor FtsY DM55_RS05365 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle DM55_RS05365 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05370 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DM55_RS05370 IPR004398 RNA methyltransferase, RsmD DM55_RS05370 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS05375 IPR001980 Coenzyme A biosynthesis protein DM55_RS05375 IPR004821 Cytidyltransferase-like domain DM55_RS05375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS05380 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS05380 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS05385 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DM55_RS05385 IPR004839 Aminotransferase, class I/classII DM55_RS05385 IPR005861 Histidinol-phosphate aminotransferase family DM55_RS05385 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS05385 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS05385 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS05390 IPR001328 Peptidyl-tRNA hydrolase DM55_RS05390 IPR018171 Peptidyl-tRNA hydrolase, conserved site DM55_RS05395 IPR001021 Ribosomal protein L25, long-form DM55_RS05395 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain DM55_RS05395 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain DM55_RS05395 IPR020057 Ribosomal protein L25, beta domain DM55_RS05395 IPR029751 Ribosomal protein L25 DM55_RS05400 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site DM55_RS05400 IPR005946 Ribose-phosphate diphosphokinase DM55_RS05400 IPR029057 Phosphoribosyltransferase-like DM55_RS05400 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain DM55_RS05410 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase DM55_RS05410 IPR006204 GHMP kinase N-terminal domain DM55_RS05410 IPR013750 GHMP kinase, C-terminal domain DM55_RS05410 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS05410 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS05415 IPR004565 Outer membrane lipoprotein LolB DM55_RS05415 IPR029046 Lipoprotein localisation LolA/LolB/LppX DM55_RS05420 IPR011990 Tetratricopeptide-like helical domain DM55_RS05420 IPR019734 Tetratricopeptide repeat DM55_RS05425 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase DM55_RS05425 IPR010979 Ribosomal protein S13-like, H2TH DM55_RS05425 IPR012319 DNA glycosylase/AP lyase, catalytic domain DM55_RS05425 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding DM55_RS05425 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site DM55_RS05425 IPR020629 Formamidopyrimidine-DNA glycosylase DM55_RS05430 IPR000445 Helix-hairpin-helix motif DM55_RS05430 IPR003265 HhH-GPD domain DM55_RS05430 IPR004036 Endonuclease III-like, conserved site-2 DM55_RS05430 IPR005760 A/G-specific adenine glycosylase MutY DM55_RS05430 IPR011257 DNA glycosylase DM55_RS05430 IPR015797 NUDIX hydrolase domain-like DM55_RS05430 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DM55_RS05430 IPR029119 MutY, C-terminal DM55_RS05435 IPR003111 Peptidase S16, lon N-terminal DM55_RS05435 IPR015947 PUA-like domain DM55_RS05440 IPR005337 ATPase, P-loop-containing DM55_RS05440 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05445 IPR003755 HPr(Ser) kinase/phosphorylase DM55_RS05445 IPR011104 HPr kinase/phosphorylase, C-terminal DM55_RS05445 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal DM55_RS05445 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05445 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like DM55_RS05450 IPR002178 PTS EIIA type-2 domain DM55_RS05450 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN DM55_RS05450 IPR016152 Phosphotransferase/anion transporter DM55_RS05455 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein DM55_RS05460 IPR000394 RNA polymerase sigma factor 54 DM55_RS05460 IPR007046 RNA polymerase sigma factor 54, core-binding DM55_RS05460 IPR007634 RNA polymerase sigma factor 54, DNA-binding DM55_RS05465 IPR003439 ABC transporter-like DM55_RS05465 IPR003593 AAA+ ATPase domain DM55_RS05465 IPR017871 ABC transporter, conserved site DM55_RS05465 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05465 IPR030921 DM55_RS05465 DM55_RS05465 IPR032823 DM55_RS05465 DM55_RS05470 IPR005653 Organic solvent tolerance-like, N-terminal DM55_RS05470 IPR014340 Lipopolysaccharide assembly, LptA DM55_RS05475 IPR010664 Lipopolysaccharide assembly, LptC-related DM55_RS05475 IPR026265 Lipopolysaccharide export system protein LptC DM55_RS05480 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase DM55_RS05480 IPR023214 HAD-like domain DM55_RS05485 IPR000644 CBS domain DM55_RS05485 IPR001347 Sugar isomerase (SIS) DM55_RS05485 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type DM55_RS05490 IPR003148 Regulator of K+ conductance, N-terminal DM55_RS05490 IPR006037 Regulator of K+ conductance, C-terminal DM55_RS05490 IPR006153 Cation/H+ exchanger DM55_RS05490 IPR016040 NAD(P)-binding domain DM55_RS05495 IPR000836 Phosphoribosyltransferase domain DM55_RS05495 IPR005764 Adenine phosphoribosyl transferase DM55_RS05495 IPR029057 Phosphoribosyltransferase-like DM55_RS05500 IPR001123 Lysine-type exporter protein (LYSE/YGGA) DM55_RS05505 IPR000086 NUDIX hydrolase domain DM55_RS05505 IPR015797 NUDIX hydrolase domain-like DM55_RS05505 IPR031804 DM55_RS05505 DM55_RS05510 IPR002376 Formyl transferase, N-terminal DM55_RS05510 IPR004810 Formyltetrahydrofolate deformylase DM55_RS05520 IPR004602 UvrABC system subunit A DM55_RS05520 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS05520 IPR017871 ABC transporter, conserved site DM55_RS05520 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05525 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG DM55_RS05525 IPR011701 Major facilitator superfamily DM55_RS05525 IPR020846 Major facilitator superfamily domain DM55_RS05530 IPR000424 Primosome PriB/single-strand DNA-binding DM55_RS05530 IPR011344 Single-stranded DNA-binding protein DM55_RS05530 IPR012340 Nucleic acid-binding, OB-fold DM55_RS05535 IPR002514 Transposase IS3/IS911family DM55_RS05535 IPR009057 Homeodomain-like DM55_RS05540 IPR001584 Integrase, catalytic core DM55_RS05540 IPR012337 Ribonuclease H-like domain DM55_RS05540 IPR025948 HTH-like domain DM55_RS05545 IPR002293 Amino acid/polyamine transporter I DM55_RS05545 IPR004840 Amino acid permease, conserved site DM55_RS05545 IPR004841 Amino acid permease/ SLC12A domain DM55_RS05555 IPR002324 Cytochrome c, class ID DM55_RS05555 IPR009056 Cytochrome c-like domain DM55_RS05560 IPR007055 BON domain DM55_RS05560 IPR014004 Transport-associated and nodulation domain, bacteria DM55_RS05565 IPR001347 Sugar isomerase (SIS) DM55_RS05570 IPR003509 Uncharacterised protein family UPF0102 DM55_RS05570 IPR011335 Restriction endonuclease type II-like DM55_RS05570 IPR011856 tRNA endonuclease-like domain DM55_RS05575 IPR000878 Tetrapyrrole methylase DM55_RS05575 IPR008189 rRNA small subunit methyltransferase I DM55_RS05575 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS05575 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS05575 IPR018063 SAM-dependent methyltransferase RsmI, conserved site DM55_RS05585 IPR025668 Transposase DDE domain DM55_RS05590 IPR010628 Ethanolamine ammonia lyase large subunit DM55_RS05590 IPR013785 Aldolase-type TIM barrel DM55_RS05595 IPR009246 Ethanolamine ammonia-lyase light chain DM55_RS05605 IPR015590 Aldehyde dehydrogenase domain DM55_RS05605 IPR016160 Aldehyde dehydrogenase, cysteine active site DM55_RS05605 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS05605 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS05605 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS05605 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS05610 IPR009057 Homeodomain-like DM55_RS05610 IPR018060 DNA binding HTH domain, AraC-type DM55_RS05620 IPR000399 TPP-binding enzyme, conserved site DM55_RS05620 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DM55_RS05620 IPR012000 Thiamine pyrophosphate enzyme, central domain DM55_RS05620 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DM55_RS05620 IPR029035 DHS-like NAD/FAD-binding domain DM55_RS05620 IPR029061 Thiamin diphosphate-binding fold DM55_RS05630 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form DM55_RS05630 IPR005130 Serine dehydratase-like, alpha subunit DM55_RS05630 IPR005131 Serine dehydratase beta chain DM55_RS05630 IPR029009 Allosteric substrate binding domain DM55_RS05635 IPR008397 Alginate lyase domain DM55_RS05635 IPR008929 Chondroitin AC/alginate lyase DM55_RS05640 IPR003437 Glycine cleavage system P protein, homodimeric DM55_RS05640 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS05640 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS05640 IPR020580 Glycine cleavage system P-protein, N-terminal DM55_RS05640 IPR020581 Glycine cleavage system P protein DM55_RS05645 IPR002930 Glycine cleavage system H-protein DM55_RS05645 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DM55_RS05645 IPR011053 Single hybrid motif DM55_RS05645 IPR017453 Glycine cleavage system H-protein, subgroup DM55_RS05650 IPR006222 Glycine cleavage T-protein, N-terminal DM55_RS05650 IPR006223 Glycine cleavage system T protein DM55_RS05650 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain DM55_RS05650 IPR022903 Glycine cleavage system T protein, bacteria DM55_RS05650 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 DM55_RS05650 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA DM55_RS05650 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain DM55_RS05660 IPR000683 Oxidoreductase, N-terminal DM55_RS05660 IPR004104 Oxidoreductase, C-terminal DM55_RS05660 IPR016040 NAD(P)-binding domain DM55_RS05665 IPR013830 DM55_RS05665 DM55_RS05675 IPR000212 DNA helicase, UvrD/REP type DM55_RS05675 IPR005752 DNA helicase, ATP-dependent, RepA type DM55_RS05675 IPR013986 DExx box DNA helicase domain DM55_RS05675 IPR014016 UvrD-like Helicase, ATP-binding domain DM55_RS05675 IPR014017 DNA helicase, UvrD-like, C-terminal DM55_RS05675 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05680 IPR002323 Cytochrome c, class IE DM55_RS05680 IPR009056 Cytochrome c-like domain DM55_RS05690 IPR002104 Integrase, catalytic DM55_RS05690 IPR011010 DNA breaking-rejoining enzyme, catalytic core DM55_RS05690 IPR013762 Integrase-like, catalytic core DM55_RS05700 IPR002514 Transposase IS3/IS911family DM55_RS05700 IPR009057 Homeodomain-like DM55_RS05705 IPR002059 Cold-shock protein, DNA-binding DM55_RS05705 IPR011129 Cold shock protein DM55_RS05705 IPR012156 Cold shock, CspA DM55_RS05705 IPR012340 Nucleic acid-binding, OB-fold DM55_RS05705 IPR019844 Cold-shock conserved site DM55_RS05710 IPR008490 Transposase InsH, N-terminal DM55_RS05710 IPR025668 Transposase DDE domain DM55_RS05715 IPR003495 CobW/HypB/UreG domain DM55_RS05715 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DM55_RS05715 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05720 IPR008258 Lytic transglycosylase-like SLT domain DM55_RS05720 IPR023346 Lysozyme-like domain DM55_RS05725 IPR001775 GspD/PilQ family DM55_RS05725 IPR004846 Type II/III secretion system DM55_RS05725 IPR005644 NolW-like DM55_RS05725 IPR013356 Type II secretion system GspD DM55_RS05730 IPR001482 Type II secretion system protein E DM55_RS05730 IPR003593 AAA+ ATPase domain DM55_RS05730 IPR007831 General secretory system II, protein E, N-terminal DM55_RS05730 IPR013369 Type II secretion system GspE DM55_RS05730 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05735 IPR003004 GspF/PilC family DM55_RS05735 IPR011850 General secretion pathway protein F DM55_RS05735 IPR018076 Type II secretion system F domain DM55_RS05745 IPR000983 Bacterial general secretion pathway protein G-type pilin DM55_RS05745 IPR010054 General secretion pathway protein G DM55_RS05745 IPR012902 Prokaryotic N-terminal methylation site DM55_RS05745 IPR013545 Type II secretion system protein G DM55_RS05750 IPR002416 Type II secretion system protein H DM55_RS05750 IPR012902 Prokaryotic N-terminal methylation site DM55_RS05750 IPR022346 General secretion pathway, GspH DM55_RS05755 IPR003413 Type II secretion system protein I domain DM55_RS05755 IPR010052 Type II secretion system protein I DM55_RS05755 IPR012902 Prokaryotic N-terminal methylation site DM55_RS05760 IPR012902 Prokaryotic N-terminal methylation site DM55_RS05765 IPR005628 General secretion pathway protein K DM55_RS05770 IPR007812 Type II secretion system protein L DM55_RS05770 IPR024230 GspL, cytoplasmic actin-ATPase-like domain DM55_RS05770 IPR025691 GspL periplasmic domain DM55_RS05775 IPR007690 Type II secretion system, protein M DM55_RS05775 IPR023229 Type II secretion system protein M, periplasmic domain DM55_RS05780 IPR022792 Type II secretion system, protein N DM55_RS05785 IPR003423 Outer membrane efflux protein DM55_RS05785 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DM55_RS05795 IPR000835 MarR-type HTH domain DM55_RS05795 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS05795 IPR023187 Transcriptional regulator MarR-type, conserved site DM55_RS05805 IPR000847 Transcription regulator HTH, LysR DM55_RS05805 IPR005119 LysR, substrate-binding DM55_RS05805 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS05810 IPR005538 LrgA/CidA family DM55_RS05815 IPR007300 CidB/LrgB family DM55_RS05825 IPR005503 Flagellar basal body-associated protein FliL DM55_RS05830 IPR001543 Surface presentation of antigen (SpoA) DM55_RS05830 IPR001689 Flagellar motor switch protein FliM DM55_RS05830 IPR028976 CheC-like domain DM55_RS05835 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb DM55_RS05835 IPR001543 Surface presentation of antigen (SpoA) DM55_RS05835 IPR012826 Flagellar motor switch FliN DM55_RS05840 IPR022781 Flagellar biosynthesis protein, FliO DM55_RS05850 IPR002514 Transposase IS3/IS911family DM55_RS05850 IPR009057 Homeodomain-like DM55_RS05855 IPR001584 Integrase, catalytic core DM55_RS05855 IPR012337 Ribonuclease H-like domain DM55_RS05855 IPR025948 HTH-like domain DM55_RS05875 IPR003673 CoA-transferase family III DM55_RS05875 IPR023606 CoA-transferase family III domain DM55_RS05880 IPR001753 Crotonase superfamily DM55_RS05880 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS05880 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS05880 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS05880 IPR013328 Dehydrogenase, multihelical DM55_RS05880 IPR016040 NAD(P)-binding domain DM55_RS05880 IPR029045 ClpP/crotonase-like domain DM55_RS05885 IPR002155 Thiolase DM55_RS05885 IPR016039 Thiolase-like DM55_RS05885 IPR020610 Thiolase, active site DM55_RS05885 IPR020613 Thiolase, conserved site DM55_RS05885 IPR020616 Thiolase, N-terminal DM55_RS05885 IPR020617 Thiolase, C-terminal DM55_RS05890 IPR006089 Acyl-CoA dehydrogenase, conserved site DM55_RS05890 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS05890 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS05890 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS05890 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS05900 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS05900 IPR012906 PaaX-like, N-terminal DM55_RS05900 IPR013225 PaaX-like, C-terminal DM55_RS05905 IPR005804 Fatty acid desaturase, type 1 DM55_RS05910 IPR012963 Protein of unknown function DUF1700 DM55_RS05915 IPR005149 Transcription regulator PadR N-terminal DM55_RS05915 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS05920 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal DM55_RS05920 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal DM55_RS05920 IPR012132 Glucose-methanol-choline oxidoreductase DM55_RS05920 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS05925 IPR002347 Glucose/ribitol dehydrogenase DM55_RS05925 IPR016040 NAD(P)-binding domain DM55_RS05925 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS05930 IPR024724 Molybdenum cofactor biosynthesis protein F DM55_RS05935 IPR009959 Polyketide cyclase SnoaL-like domain DM55_RS05935 IPR032710 DM55_RS05935 DM55_RS05940 IPR015590 Aldehyde dehydrogenase domain DM55_RS05940 IPR016160 Aldehyde dehydrogenase, cysteine active site DM55_RS05940 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS05940 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS05940 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS05940 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS05945 IPR028081 Leucine-binding protein domain DM55_RS05945 IPR028082 Periplasmic binding protein-like I DM55_RS05950 IPR001851 ABC transporter, permease DM55_RS05955 IPR001851 ABC transporter, permease DM55_RS05960 IPR003439 ABC transporter-like DM55_RS05960 IPR003593 AAA+ ATPase domain DM55_RS05960 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05965 IPR003439 ABC transporter-like DM55_RS05965 IPR003593 AAA+ ATPase domain DM55_RS05965 IPR017871 ABC transporter, conserved site DM55_RS05965 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05970 IPR003313 AraC-type arabinose-binding/dimerisation domain DM55_RS05970 IPR009057 Homeodomain-like DM55_RS05970 IPR014710 RmlC-like jelly roll fold DM55_RS05970 IPR018060 DNA binding HTH domain, AraC-type DM55_RS05970 IPR020449 Transcription regulator HTH, AraC- type DM55_RS05975 IPR002299 Porin, Neisseria sp. type DM55_RS05975 IPR023614 Porin domain DM55_RS05985 IPR006935 Helicase/UvrB domain DM55_RS05985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS05990 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DM55_RS05990 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class DM55_RS05990 IPR002941 DNA methylase N-4/N-6 DM55_RS05990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS05995 IPR002299 Porin, Neisseria sp. type DM55_RS05995 IPR023614 Porin domain DM55_RS06000 IPR001789 Signal transduction response regulator, receiver domain DM55_RS06000 IPR001867 Signal transduction response regulator, C-terminal DM55_RS06000 IPR011006 CheY-like superfamily DM55_RS06000 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS06005 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS06005 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS06005 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS06005 IPR013727 Two-component sensor kinase N-terminal DM55_RS06010 IPR000515 MetI-like domain DM55_RS06015 IPR003439 ABC transporter-like DM55_RS06015 IPR003593 AAA+ ATPase domain DM55_RS06015 IPR017871 ABC transporter, conserved site DM55_RS06015 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06020 IPR015168 SsuA/THI5-like DM55_RS06025 IPR021329 Protein of unknown function DUF2938 DM55_RS06030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS06035 IPR000551 MerR-type HTH domain DM55_RS06035 IPR009061 DNA binding domain, putative DM55_RS06040 IPR002010 Type III secretion system inner membrane R protein DM55_RS06040 IPR006303 Flagellar biosynthesis protein FliR DM55_RS06045 IPR002191 Bacterial export protein family 3 DM55_RS06045 IPR006305 Flagellar biosynthesis protein FliQ DM55_RS06050 IPR005837 Flagellar transport protein FliP DM55_RS06050 IPR005838 Type III secretion system inner membrane P protein DM55_RS06055 IPR001584 Integrase, catalytic core DM55_RS06055 IPR012337 Ribonuclease H-like domain DM55_RS06055 IPR025948 HTH-like domain DM55_RS06060 IPR002514 Transposase IS3/IS911family DM55_RS06060 IPR009057 Homeodomain-like DM55_RS06065 IPR004921 Terminase, large subunit DM55_RS06075 IPR007481 Stringent starvation protein B DM55_RS06080 IPR004045 Glutathione S-transferase, N-terminal DM55_RS06080 IPR004046 Glutathione S-transferase, C-terminal DM55_RS06080 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS06080 IPR012336 Thioredoxin-like fold DM55_RS06085 IPR002326 Cytochrome c1 DM55_RS06085 IPR009056 Cytochrome c-like domain DM55_RS06090 IPR005798 Cytochrome b/b6, C-terminal DM55_RS06090 IPR016174 Di-haem cytochrome, transmembrane DM55_RS06090 IPR027387 Cytochrome b/b6-like domain DM55_RS06090 IPR030689 DM55_RS06090 DM55_RS06095 IPR005805 Rieske iron-sulphur protein, C-terminal DM55_RS06095 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit DM55_RS06095 IPR014349 Rieske iron-sulphur protein DM55_RS06095 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DM55_RS06095 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal DM55_RS06100 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DM55_RS06105 IPR001478 PDZ domain DM55_RS06105 IPR001940 Peptidase S1C DM55_RS06105 IPR009003 Trypsin-like cysteine/serine peptidase domain DM55_RS06105 IPR011782 Peptidase S1C, Do DM55_RS06115 IPR002033 Sec-independent periplasmic protein translocase TatC DM55_RS06120 IPR003369 Sec-independent protein translocase protein TatA/B/E DM55_RS06120 IPR003998 Twin-arginine translocation protein TatB-like DM55_RS06120 IPR018448 Twin-arginine translocation protein TatB DM55_RS06125 IPR003369 Sec-independent protein translocase protein TatA/B/E DM55_RS06125 IPR006312 Sec-independent protein translocase protein TatA/E DM55_RS06130 IPR001310 Histidine triad (HIT) protein DM55_RS06130 IPR011146 HIT-like domain DM55_RS06140 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase DM55_RS06140 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like DM55_RS06145 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain DM55_RS06145 IPR026660 Phosphoribosyl-AMP cyclohydrolase DM55_RS06150 IPR004651 Histidine biosynthesis, HisF DM55_RS06150 IPR006062 Histidine biosynthesis DM55_RS06150 IPR011060 Ribulose-phosphate binding barrel DM55_RS06150 IPR013785 Aldolase-type TIM barrel DM55_RS06155 IPR006062 Histidine biosynthesis DM55_RS06155 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA DM55_RS06155 IPR011060 Ribulose-phosphate binding barrel DM55_RS06155 IPR013785 Aldolase-type TIM barrel DM55_RS06155 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase DM55_RS06160 IPR010139 Imidazole glycerol phosphate synthase, subunit H DM55_RS06160 IPR017926 Glutamine amidotransferase DM55_RS06160 IPR029062 Class I glutamine amidotransferase-like DM55_RS06165 IPR002771 Multiple antibiotic resistance (MarC)-related DM55_RS06170 IPR000807 Imidazoleglycerol-phosphate dehydratase DM55_RS06170 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site DM55_RS06170 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS06175 IPR004839 Aminotransferase, class I/classII DM55_RS06175 IPR005861 Histidinol-phosphate aminotransferase family DM55_RS06175 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS06175 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS06175 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS06180 IPR001692 Histidinol dehydrogenase, conserved site DM55_RS06180 IPR012131 Histidinol dehydrogenase DM55_RS06180 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS06180 IPR022695 Histidinol dehydrogenase, monofunctional DM55_RS06185 IPR001348 ATP phosphoribosyltransferase HisG DM55_RS06185 IPR013820 ATP phosphoribosyltransferase, catalytic domain DM55_RS06185 IPR018198 ATP phosphoribosyltransferase, conserved site DM55_RS06185 IPR024893 ATP phosphoribosyltransferase HisG, short form DM55_RS06190 IPR001986 Enolpyruvate transferase domain DM55_RS06190 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase DM55_RS06190 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DM55_RS06195 IPR002634 BolA protein DM55_RS06200 IPR000412 ABC-2 transporter DM55_RS06200 IPR013525 ABC-2 type transporter DM55_RS06205 IPR003439 ABC transporter-like DM55_RS06205 IPR003593 AAA+ ATPase domain DM55_RS06205 IPR017871 ABC transporter, conserved site DM55_RS06205 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06210 IPR002645 STAS domain DM55_RS06215 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC DM55_RS06215 IPR023094 Toluene tolerance protein, alpha-helical DM55_RS06215 IPR032710 DM55_RS06215 DM55_RS06220 IPR007428 VacJ-like lipoprotein DM55_RS06225 IPR003399 Mammalian cell entry-related DM55_RS06225 IPR030970 DM55_RS06225 DM55_RS06230 IPR003453 Permease domain DM55_RS06230 IPR030802 DM55_RS06230 DM55_RS06235 IPR003439 ABC transporter-like DM55_RS06235 IPR003593 AAA+ ATPase domain DM55_RS06235 IPR017871 ABC transporter, conserved site DM55_RS06235 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06240 IPR003733 Thiamine phosphate synthase DM55_RS06240 IPR013785 Aldolase-type TIM barrel DM55_RS06240 IPR022998 Thiamin phosphate synthase superfamily DM55_RS06245 IPR008867 Thiazole biosynthesis DM55_RS06245 IPR013785 Aldolase-type TIM barrel DM55_RS06250 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 DM55_RS06250 IPR010035 ThiS, thiamine-biosynthesis DM55_RS06250 IPR012675 Beta-grasp domain DM55_RS06250 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DM55_RS06255 IPR006076 FAD dependent oxidoreductase DM55_RS06255 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS06260 IPR003439 ABC transporter-like DM55_RS06260 IPR003593 AAA+ ATPase domain DM55_RS06260 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS06260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06265 IPR004175 2',5' RNA ligase DM55_RS06265 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase DM55_RS06270 IPR001463 Sodium:alanine symporter DM55_RS06275 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 DM55_RS06275 IPR009051 Alpha-helical ferredoxin DM55_RS06275 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS06275 IPR028261 Dihydroprymidine dehydrogenase domain II DM55_RS06280 IPR002489 Glutamate synthase, alpha subunit, C-terminal DM55_RS06280 IPR002932 Glutamate synthase domain DM55_RS06280 IPR006982 Glutamate synthase, central-N DM55_RS06280 IPR013785 Aldolase-type TIM barrel DM55_RS06280 IPR017932 Glutamine amidotransferase type 2 domain DM55_RS06280 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS06285 IPR002686 Transposase IS200-like DM55_RS06290 IPR005618 Outer membrane protein, OmpW DM55_RS06290 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel DM55_RS06295 IPR004129 Glycerophosphoryl diester phosphodiesterase DM55_RS06295 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain DM55_RS06295 IPR030395 DM55_RS06295 DM55_RS06300 IPR003439 ABC transporter-like DM55_RS06300 IPR003593 AAA+ ATPase domain DM55_RS06300 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS06300 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06300 IPR013611 Transport-associated OB, type 2 DM55_RS06300 IPR017871 ABC transporter, conserved site DM55_RS06300 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06305 IPR000515 MetI-like domain DM55_RS06305 IPR030165 DM55_RS06305 DM55_RS06310 IPR000515 MetI-like domain DM55_RS06315 IPR006061 Bacterial extracellular solute-binding family 1, conserved site DM55_RS06320 IPR003607 HD/PDEase domain DM55_RS06320 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase DM55_RS06320 IPR006674 HD domain DM55_RS06320 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 DM55_RS06320 IPR026875 Phosphohydrolase-associated domain DM55_RS06325 IPR016037 3-dehydroquinate synthase AroB DM55_RS06325 IPR030960 DM55_RS06325 DM55_RS06325 IPR030963 DM55_RS06325 DM55_RS06330 IPR000623 Shikimate kinase/Threonine synthase-like 1 DM55_RS06330 IPR023000 Shikimate kinase, conserved site DM55_RS06330 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06330 IPR031322 DM55_RS06330 DM55_RS06335 IPR001775 GspD/PilQ family DM55_RS06335 IPR004846 Type II/III secretion system DM55_RS06335 IPR005644 NolW-like DM55_RS06335 IPR011662 Secretin/TonB, short N-terminal DM55_RS06335 IPR013355 Type IV pilus secretin PilQ DM55_RS06350 IPR005883 Type IV pilus assembly protein PilM DM55_RS06355 IPR001264 Glycosyl transferase, family 51 DM55_RS06355 IPR001460 Penicillin-binding protein, transpeptidase DM55_RS06355 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS06355 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06355 IPR023346 Lysozyme-like domain DM55_RS06355 IPR031376 DM55_RS06355 DM55_RS06365 IPR002908 Frataxin/CyaY DM55_RS06365 IPR020895 Frataxin conserved site DM55_RS06370 IPR032831 DM55_RS06370 DM55_RS06375 IPR000183 Ornithine/DAP/Arg decarboxylase DM55_RS06375 IPR002986 Diaminopimelate decarboxylase, LysA DM55_RS06375 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal DM55_RS06375 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal DM55_RS06375 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal DM55_RS06375 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site DM55_RS06375 IPR029066 PLP-binding barrel DM55_RS06380 IPR013130 Ferric reductase transmembrane component-like domain DM55_RS06380 IPR022837 Sulphoxide reductase heme-binding subunit YedZ DM55_RS06385 IPR000572 Oxidoreductase, molybdopterin-binding domain DM55_RS06385 IPR022867 Sulphoxide reductase catalytic subunit YedY DM55_RS06390 IPR001584 Integrase, catalytic core DM55_RS06390 IPR012337 Ribonuclease H-like domain DM55_RS06390 IPR025948 HTH-like domain DM55_RS06395 IPR002514 Transposase IS3/IS911family DM55_RS06395 IPR009057 Homeodomain-like DM55_RS06415 IPR000795 Elongation factor, GTP-binding domain DM55_RS06415 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DM55_RS06415 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 DM55_RS06415 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DM55_RS06415 IPR005225 Small GTP-binding protein domain DM55_RS06415 IPR009000 Translation protein, beta-barrel domain DM55_RS06415 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DM55_RS06415 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06415 IPR031157 DM55_RS06415 DM55_RS06425 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit DM55_RS06425 IPR005807 SecE subunit of protein translocation complex DM55_RS06425 IPR022943 Preprotein translocase subunit SecE DM55_RS06430 IPR001062 Transcription antitermination protein, NusG DM55_RS06430 IPR005824 KOW DM55_RS06430 IPR006645 NusG, N-terminal DM55_RS06430 IPR008991 Translation protein SH3-like domain DM55_RS06430 IPR014722 Ribosomal protein L2 domain 2 DM55_RS06430 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DM55_RS06435 IPR000911 Ribosomal protein L11/L12 DM55_RS06435 IPR006519 Ribosomal protein L11, bacterial-type DM55_RS06435 IPR020783 Ribosomal protein L11, C-terminal DM55_RS06435 IPR020784 Ribosomal protein L11, N-terminal DM55_RS06435 IPR020785 Ribosomal protein L11, conserved site DM55_RS06440 IPR002143 Ribosomal protein L1 DM55_RS06440 IPR005878 Ribosomal protein L1, bacterial-type DM55_RS06440 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich DM55_RS06440 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DM55_RS06440 IPR023673 Ribosomal protein L1, conserved site DM55_RS06440 IPR023674 Ribosomal protein L1-like DM55_RS06440 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DM55_RS06445 IPR001790 Ribosomal protein L10/acidic P0 DM55_RS06445 IPR022973 Ribosomal protein L10 DM55_RS06450 IPR000206 Ribosomal protein L7/L12 DM55_RS06450 IPR008932 Ribosomal protein L7/L12, oligomerisation DM55_RS06450 IPR013823 Ribosomal protein L7/L12, C-terminal DM55_RS06450 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DM55_RS06455 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 DM55_RS06455 IPR007121 RNA polymerase, beta subunit, conserved site DM55_RS06455 IPR007641 RNA polymerase Rpb2, domain 7 DM55_RS06455 IPR007642 RNA polymerase Rpb2, domain 2 DM55_RS06455 IPR007644 RNA polymerase, beta subunit, protrusion DM55_RS06455 IPR007645 RNA polymerase Rpb2, domain 3 DM55_RS06455 IPR010243 DNA-directed RNA polymerase, beta subunit DM55_RS06455 IPR014724 RNA polymerase Rpb2, OB-fold DM55_RS06455 IPR015712 DNA-directed RNA polymerase, subunit 2 DM55_RS06455 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain DM55_RS06460 IPR000722 RNA polymerase, alpha subunit DM55_RS06460 IPR006592 RNA polymerase, N-terminal DM55_RS06460 IPR007066 RNA polymerase Rpb1, domain 3 DM55_RS06460 IPR007080 RNA polymerase Rpb1, domain 1 DM55_RS06460 IPR007081 RNA polymerase Rpb1, domain 5 DM55_RS06460 IPR007083 RNA polymerase Rpb1, domain 4 DM55_RS06460 IPR012754 DNA-directed RNA polymerase, subunit beta-prime DM55_RS06470 IPR001650 Helicase, C-terminal DM55_RS06470 IPR002121 HRDC domain DM55_RS06470 IPR004589 DNA helicase, ATP-dependent, RecQ type DM55_RS06470 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial DM55_RS06470 IPR010997 HRDC-like DM55_RS06470 IPR011545 DEAD/DEAH box helicase domain DM55_RS06470 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS06470 IPR014001 Helicase, superfamily 1/2, ATP-binding domain DM55_RS06470 IPR018982 RQC domain DM55_RS06470 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06470 IPR032284 DM55_RS06470 DM55_RS06475 IPR005679 Ribosomal protein S12, bacteria DM55_RS06475 IPR006032 Ribosomal protein S12/S23 DM55_RS06475 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06480 IPR000235 Ribosomal protein S5/S7 DM55_RS06480 IPR005717 Ribosomal protein S7, bacterial/organellar-type DM55_RS06480 IPR020606 Ribosomal protein S7, conserved site DM55_RS06480 IPR023798 Ribosomal protein S7 domain DM55_RS06485 IPR000640 Translation elongation factor EFG, V domain DM55_RS06485 IPR000795 Elongation factor, GTP-binding domain DM55_RS06485 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 DM55_RS06485 IPR004540 Translation elongation factor EFG/EF2 DM55_RS06485 IPR005225 Small GTP-binding protein domain DM55_RS06485 IPR005517 Translation elongation factor EFG/EF2, domain IV DM55_RS06485 IPR009000 Translation protein, beta-barrel domain DM55_RS06485 IPR009022 Elongation factor G, III-V domain DM55_RS06485 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS06485 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS06485 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06485 IPR031157 DM55_RS06485 DM55_RS06490 IPR000795 Elongation factor, GTP-binding domain DM55_RS06490 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DM55_RS06490 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 DM55_RS06490 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle DM55_RS06490 IPR005225 Small GTP-binding protein domain DM55_RS06490 IPR009000 Translation protein, beta-barrel domain DM55_RS06490 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DM55_RS06490 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06490 IPR031157 DM55_RS06490 DM55_RS06495 IPR001848 Ribosomal protein S10 DM55_RS06495 IPR018268 Ribosomal protein S10, conserved site DM55_RS06495 IPR027486 Ribosomal protein S10 domain DM55_RS06500 IPR000597 Ribosomal protein L3 DM55_RS06500 IPR009000 Translation protein, beta-barrel domain DM55_RS06500 IPR019926 Ribosomal protein L3, conserved site DM55_RS06500 IPR019927 Ribosomal protein L3, bacterial/organelle-type DM55_RS06505 IPR002136 Ribosomal protein L4/L1e DM55_RS06505 IPR013005 Ribosomal protein L4/L1e, bacterial-type DM55_RS06505 IPR023574 Ribosomal protein L4 domain DM55_RS06510 IPR012677 Nucleotide-binding, alpha-beta plait DM55_RS06510 IPR012678 Ribosomal protein L23/L15e core domain DM55_RS06510 IPR013025 Ribosomal protein L25/L23 DM55_RS06515 IPR002171 Ribosomal protein L2 DM55_RS06515 IPR005880 Ribosomal protein L2, bacterial/organellar-type DM55_RS06515 IPR008991 Translation protein SH3-like domain DM55_RS06515 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06515 IPR014722 Ribosomal protein L2 domain 2 DM55_RS06515 IPR014726 Ribosomal protein L2, domain 3 DM55_RS06515 IPR022666 Ribosomal Proteins L2, RNA binding domain DM55_RS06515 IPR022669 Ribosomal protein L2, C-terminal DM55_RS06515 IPR022671 Ribosomal protein L2, conserved site DM55_RS06520 IPR002222 Ribosomal protein S19/S15 DM55_RS06520 IPR005732 Ribosomal protein S19, bacterial-type DM55_RS06520 IPR020934 Ribosomal protein S19 conserved site DM55_RS06520 IPR023575 Ribosomal protein S19, superfamily DM55_RS06525 IPR001063 Ribosomal protein L22/L17 DM55_RS06525 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type DM55_RS06525 IPR018260 Ribosomal protein L22/L17, conserved site DM55_RS06530 IPR001351 Ribosomal protein S3, C-terminal DM55_RS06530 IPR004044 K Homology domain, type 2 DM55_RS06530 IPR004087 K Homology domain DM55_RS06530 IPR005704 Ribosomal protein S3, bacterial DM55_RS06530 IPR009019 K homology domain, prokaryotic type DM55_RS06530 IPR015946 K homology domain-like, alpha/beta DM55_RS06530 IPR018280 Ribosomal protein S3, conserved site DM55_RS06535 IPR000114 Ribosomal protein L16 DM55_RS06535 IPR016180 Ribosomal protein L10e/L16 DM55_RS06535 IPR020798 Ribosomal protein L16, conserved site DM55_RS06540 IPR001854 Ribosomal protein L29 DM55_RS06540 IPR018254 Ribosomal protein L29, conserved site DM55_RS06545 IPR000266 Ribosomal protein S17 DM55_RS06545 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06545 IPR019979 Ribosomal protein S17, conserved site DM55_RS06545 IPR019984 Ribosomal protein S17, bacterial-type DM55_RS06550 IPR000218 Ribosomal protein L14b/L23e DM55_RS06550 IPR005745 Ribosomal protein L14, bacterial-type DM55_RS06550 IPR019972 Ribosomal protein L14 conserved site DM55_RS06555 IPR003256 Ribosomal protein L24 DM55_RS06555 IPR005825 Ribosomal protein L24/L26, conserved site DM55_RS06555 IPR008991 Translation protein SH3-like domain DM55_RS06555 IPR014722 Ribosomal protein L2 domain 2 DM55_RS06560 IPR002132 Ribosomal protein L5 DM55_RS06560 IPR020929 Ribosomal protein L5, conserved site DM55_RS06560 IPR020930 Ribosomal protein L5, bacterial-type DM55_RS06560 IPR022803 Ribosomal protein L5 domain DM55_RS06560 IPR031309 DM55_RS06560 DM55_RS06560 IPR031310 DM55_RS06560 DM55_RS06565 IPR001209 Ribosomal protein S14 DM55_RS06565 IPR023036 Ribosomal protein S14, bacterial/plastid DM55_RS06570 IPR000630 Ribosomal protein S8 DM55_RS06575 IPR000702 Ribosomal protein L6 DM55_RS06575 IPR002358 Ribosomal protein L6, conserved site DM55_RS06575 IPR019906 Ribosomal protein L6, bacterial-type DM55_RS06575 IPR020040 Ribosomal protein L6, alpha-beta domain DM55_RS06580 IPR004389 Ribosomal protein L18, bacterial-type DM55_RS06580 IPR005484 Ribosomal protein L18/L5 DM55_RS06585 IPR000851 Ribosomal protein S5 DM55_RS06585 IPR005324 Ribosomal protein S5, C-terminal DM55_RS06585 IPR005712 Ribosomal protein S5, bacterial-type DM55_RS06585 IPR013810 Ribosomal protein S5, N-terminal DM55_RS06585 IPR014720 Double-stranded RNA-binding domain DM55_RS06585 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS06585 IPR018192 Ribosomal protein S5, N-terminal, conserved site DM55_RS06585 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS06590 IPR005996 Ribosomal protein L30, bacterial-type DM55_RS06590 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DM55_RS06595 IPR001196 Ribosomal protein L15, conserved site DM55_RS06595 IPR005749 Ribosomal protein L15, bacterial-type DM55_RS06595 IPR021131 Ribosomal protein L18e/L15P DM55_RS06595 IPR030878 DM55_RS06595 DM55_RS06600 IPR002208 SecY/SEC61-alpha family DM55_RS06600 IPR023201 SecY subunit domain DM55_RS06600 IPR026593 Protein translocase subunit SecY DM55_RS06600 IPR030659 DM55_RS06600 DM55_RS06605 IPR004368 Translation initiation factor IF-1 DM55_RS06605 IPR006196 RNA-binding domain, S1, IF1 type DM55_RS06605 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06605 IPR022967 RNA-binding domain, S1 DM55_RS06610 IPR000473 Ribosomal protein L36 DM55_RS06615 IPR001892 Ribosomal protein S13 DM55_RS06615 IPR010979 Ribosomal protein S13-like, H2TH DM55_RS06615 IPR018269 Ribosomal protein S13, conserved site DM55_RS06615 IPR019980 Ribosomal protein S13, bacterial-type DM55_RS06615 IPR027437 30s ribosomal protein S13, C-terminal DM55_RS06620 IPR001971 Ribosomal protein S11 DM55_RS06620 IPR018102 Ribosomal S11, conserved site DM55_RS06620 IPR019981 Ribosomal protein S11, bacterial-type DM55_RS06625 IPR001912 Ribosomal protein S4/S9, N-terminal DM55_RS06625 IPR002942 RNA-binding S4 domain DM55_RS06625 IPR005709 Ribosomal protein S4, bacterial-type DM55_RS06625 IPR018079 Ribosomal protein S4, conserved site DM55_RS06625 IPR022801 Ribosomal protein S4/S9 DM55_RS06630 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain DM55_RS06630 IPR011260 RNA polymerase, alpha subunit, C-terminal DM55_RS06630 IPR011262 DNA-directed RNA polymerase, insert domain DM55_RS06630 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type DM55_RS06630 IPR011773 DNA-directed RNA polymerase, alpha subunit DM55_RS06635 IPR000456 Ribosomal protein L17 DM55_RS06640 IPR004323 Divalent ion tolerance protein, CutA DM55_RS06640 IPR011322 Nitrogen regulatory PII-like, alpha/beta DM55_RS06645 IPR003834 Cytochrome c assembly protein, transmembrane domain DM55_RS06645 IPR012336 Thioredoxin-like fold DM55_RS06645 IPR017937 Thioredoxin, conserved site DM55_RS06645 IPR022910 Thiol:disulphide interchange protein DsbD DM55_RS06645 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DM55_RS06650 IPR001731 Porphobilinogen synthase DM55_RS06650 IPR013785 Aldolase-type TIM barrel DM55_RS06650 IPR030656 DM55_RS06650 DM55_RS06655 IPR006073 GTP binding domain DM55_RS06655 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC DM55_RS06655 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06660 IPR008168 Cytochrome c, class IC DM55_RS06660 IPR009056 Cytochrome c-like domain DM55_RS06660 IPR024167 Cytochrome c4 DM55_RS06665 IPR007816 ResB-like domain DM55_RS06670 IPR002541 Cytochrome c assembly protein DM55_RS06670 IPR017562 Cytochrome c-type biogenesis protein CcsA DM55_RS06675 IPR002514 Transposase IS3/IS911family DM55_RS06675 IPR009057 Homeodomain-like DM55_RS06680 IPR001584 Integrase, catalytic core DM55_RS06680 IPR012337 Ribonuclease H-like domain DM55_RS06680 IPR025948 HTH-like domain DM55_RS06690 IPR005618 Outer membrane protein, OmpW DM55_RS06690 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel DM55_RS06695 IPR021340 Protein of unknown function DUF2957 DM55_RS06700 IPR021340 Protein of unknown function DUF2957 DM55_RS06705 IPR000534 Semialdehyde dehydrogenase, NAD-binding DM55_RS06705 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 DM55_RS06705 IPR016040 NAD(P)-binding domain DM55_RS06710 IPR001226 Flavodoxin, conserved site DM55_RS06710 IPR005025 NADPH-dependent FMN reductase-like DM55_RS06710 IPR029039 Flavoprotein-like DM55_RS06715 IPR005247 YbhB/YbcL DM55_RS06715 IPR008914 Phosphatidylethanolamine-binding protein PEBP DM55_RS06720 IPR000836 Phosphoribosyltransferase domain DM55_RS06720 IPR004467 Orotate phosphoribosyl transferase domain DM55_RS06720 IPR023031 Orotate phosphoribosyltransferase DM55_RS06720 IPR029057 Phosphoribosyltransferase-like DM55_RS06725 IPR001891 Malic oxidoreductase DM55_RS06725 IPR002505 Phosphate acetyl/butaryl transferase DM55_RS06725 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase DM55_RS06725 IPR012301 Malic enzyme, N-terminal domain DM55_RS06725 IPR012302 Malic enzyme, NAD-binding DM55_RS06725 IPR016040 NAD(P)-binding domain DM55_RS06730 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain DM55_RS06730 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DM55_RS06730 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain DM55_RS06730 IPR029061 Thiamin diphosphate-binding fold DM55_RS06750 IPR002514 Transposase IS3/IS911family DM55_RS06750 IPR009057 Homeodomain-like DM55_RS06780 IPR013830 DM55_RS06780 DM55_RS06785 IPR007814 Phenylacetic acid catabolic DM55_RS06785 IPR009078 Ferritin-like superfamily DM55_RS06785 IPR011881 Phenylacetate-CoA oxygenase, PaaG subunit DM55_RS06785 IPR012347 Ferritin-related DM55_RS06790 IPR009359 Phenylacetic acid degradation B DM55_RS06795 IPR007814 Phenylacetic acid catabolic DM55_RS06795 IPR009078 Ferritin-like superfamily DM55_RS06795 IPR011882 Phenylacetate-CoA oxygenase, PaaI subunit DM55_RS06795 IPR012347 Ferritin-related DM55_RS06800 IPR002744 Domain of unknown function DUF59 DM55_RS06805 IPR001041 2Fe-2S ferredoxin-type domain DM55_RS06805 IPR001433 Oxidoreductase FAD/NAD(P)-binding DM55_RS06805 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DM55_RS06805 IPR001834 NADH:cytochrome b5 reductase (CBR) DM55_RS06805 IPR008333 Oxidoreductase, FAD-binding domain DM55_RS06805 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit DM55_RS06805 IPR012675 Beta-grasp domain DM55_RS06805 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS06810 IPR014973 Protein of unknown function DUF1835 DM55_RS06810 IPR022123 Protein of unknown function DUF3658 DM55_RS06815 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS06815 IPR009057 Homeodomain-like DM55_RS06815 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DM55_RS06815 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS06820 IPR000182 GNAT domain DM55_RS06820 IPR016181 Acyl-CoA N-acyltransferase DM55_RS06825 IPR000485 AsnC-type HTH domain DM55_RS06825 IPR011008 Dimeric alpha-beta barrel DM55_RS06825 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS06825 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DM55_RS06825 IPR019887 Transcription regulator AsnC-type, C-terminal DM55_RS06825 IPR019888 Transcription regulator AsnC-type DM55_RS06830 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DM55_RS06830 IPR005956 4-hydroxyphenylpyruvate dioxygenase DM55_RS06830 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DM55_RS06835 IPR002559 Transposase, IS4-like DM55_RS06835 IPR008490 Transposase InsH, N-terminal DM55_RS06840 IPR000971 Globin DM55_RS06840 IPR001433 Oxidoreductase FAD/NAD(P)-binding DM55_RS06840 IPR009050 Globin-like DM55_RS06840 IPR012292 Globin, structural domain DM55_RS06840 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS06845 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like DM55_RS06845 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type DM55_RS06850 IPR004113 FAD-linked oxidase, C-terminal DM55_RS06850 IPR006094 FAD linked oxidase, N-terminal DM55_RS06850 IPR016164 FAD-linked oxidase-like, C-terminal DM55_RS06850 IPR016166 FAD-binding, type 2 DM55_RS06850 IPR016167 FAD-binding, type 2, subdomain 1 DM55_RS06850 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 DM55_RS06850 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DM55_RS06855 IPR004113 FAD-linked oxidase, C-terminal DM55_RS06855 IPR006094 FAD linked oxidase, N-terminal DM55_RS06855 IPR016164 FAD-linked oxidase-like, C-terminal DM55_RS06855 IPR016166 FAD-binding, type 2 DM55_RS06855 IPR016167 FAD-binding, type 2, subdomain 1 DM55_RS06855 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 DM55_RS06855 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DM55_RS06860 IPR006094 FAD linked oxidase, N-terminal DM55_RS06860 IPR016164 FAD-linked oxidase-like, C-terminal DM55_RS06860 IPR016166 FAD-binding, type 2 DM55_RS06860 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 DM55_RS06865 IPR004017 Cysteine-rich domain DM55_RS06865 IPR009051 Alpha-helical ferredoxin DM55_RS06865 IPR012257 Glycolate oxidase, iron-sulphur subunit DM55_RS06865 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS06865 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS06870 IPR001608 Alanine racemase, N-terminal DM55_RS06870 IPR011078 Uncharacterised protein family UPF0001 DM55_RS06870 IPR029066 PLP-binding barrel DM55_RS06875 IPR000304 Pyrroline-5-carboxylate reductase DM55_RS06875 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS06875 IPR016040 NAD(P)-binding domain DM55_RS06875 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DM55_RS06875 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain DM55_RS06880 IPR000515 MetI-like domain DM55_RS06880 IPR005769 ABC transporter, permease PhnE/PtxC DM55_RS06890 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein DM55_RS06890 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein DM55_RS06895 IPR003439 ABC transporter-like DM55_RS06895 IPR003593 AAA+ ATPase domain DM55_RS06895 IPR012693 ABC transporter, phosphonate import, PhnC DM55_RS06895 IPR017871 ABC transporter, conserved site DM55_RS06895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06900 IPR011059 Metal-dependent hydrolase, composite domain DM55_RS06900 IPR012696 Phosphonate metabolism PhnM DM55_RS06900 IPR032466 DM55_RS06900 DM55_RS06905 IPR003439 ABC transporter-like DM55_RS06905 IPR003593 AAA+ ATPase domain DM55_RS06905 IPR012701 Phosphonate C-P lyase system, PhnL DM55_RS06905 IPR017871 ABC transporter, conserved site DM55_RS06905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06910 IPR003439 ABC transporter-like DM55_RS06910 IPR003593 AAA+ ATPase domain DM55_RS06910 IPR012700 Phosphonate C-P lyase system, PhnK DM55_RS06910 IPR017871 ABC transporter, conserved site DM55_RS06910 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06915 IPR010306 Phosphonate metabolism PhnJ DM55_RS06920 IPR008773 Phosphonate metabolism protein PhnI DM55_RS06925 IPR008772 Bacterial phosphonate metabolism, PhnH DM55_RS06930 IPR009609 Phosphonate metabolism PhnG DM55_RS06935 IPR000524 Transcription regulator HTH, GntR DM55_RS06935 IPR011663 UbiC transcription regulator-associated DM55_RS06935 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS06935 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF DM55_RS06935 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DM55_RS06940 IPR009389 Protein of unknown function DUF1045 DM55_RS06945 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DM55_RS06945 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN DM55_RS06945 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06950 IPR000537 UbiA prenyltransferase family DM55_RS06950 IPR006370 4-hydroxybenzoate polyprenyl transferase DM55_RS06950 IPR030470 DM55_RS06950 DM55_RS06950 IPR031103 DM55_RS06950 DM55_RS06955 IPR002577 Helix-turn-helix, HxlR type DM55_RS06955 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS06965 IPR002177 DNA-binding protein Dps DM55_RS06965 IPR008331 Ferritin/DPS protein domain DM55_RS06965 IPR009078 Ferritin-like superfamily DM55_RS06965 IPR012347 Ferritin-related DM55_RS06965 IPR023188 DNA-binding protein Dps, conserved site DM55_RS06975 IPR000763 Catalase-peroxidase haem DM55_RS06975 IPR002016 Haem peroxidase, plant/fungal/bacterial DM55_RS06975 IPR010255 Haem peroxidase DM55_RS06975 IPR019793 Peroxidases heam-ligand binding site DM55_RS06975 IPR019794 Peroxidase, active site DM55_RS06980 IPR000847 Transcription regulator HTH, LysR DM55_RS06980 IPR005119 LysR, substrate-binding DM55_RS06980 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS06985 IPR001650 Helicase, C-terminal DM55_RS06985 IPR004609 ATP-dependent DNA helicase RecG DM55_RS06985 IPR011545 DEAD/DEAH box helicase domain DM55_RS06985 IPR012340 Nucleic acid-binding, OB-fold DM55_RS06985 IPR014001 Helicase, superfamily 1/2, ATP-binding domain DM55_RS06985 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS06985 IPR033454 DM55_RS06985 DM55_RS06990 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA DM55_RS06995 IPR002616 tRNA-guanine(15) transglycosylase-like DM55_RS06995 IPR004803 Queuine tRNA-ribosyltransferase DM55_RS07000 IPR003849 Preprotein translocase YajC DM55_RS07005 IPR005791 Protein translocase subunit SecD DM55_RS07005 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DM55_RS07005 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DM55_RS07005 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DM55_RS07005 IPR027398 SecD export protein N-terminal TM domain DM55_RS07010 IPR005665 Protein-export membrane protein SecF, bacterial DM55_RS07010 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DM55_RS07010 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DM55_RS07010 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DM55_RS07015 IPR011701 Major facilitator superfamily DM55_RS07015 IPR020846 Major facilitator superfamily domain DM55_RS07020 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DM55_RS07025 IPR007372 Lipid/polyisoprenoid-binding, YceI-like DM55_RS07030 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DM55_RS07030 IPR016174 Di-haem cytochrome, transmembrane DM55_RS07035 IPR007498 Paraquat-inducible protein A DM55_RS07040 IPR007498 Paraquat-inducible protein A DM55_RS07045 IPR003399 Mammalian cell entry-related DM55_RS07050 IPR005586 Protein of unknown function DUF330 DM55_RS07055 IPR011385 Site-specific recombinase Gcr DM55_RS07060 IPR000241 Putative RNA methylase domain DM55_RS07060 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DM55_RS07060 IPR004114 THUMP DM55_RS07060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS07075 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DM55_RS07085 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07085 IPR013196 Helix-turn-helix, type 11 DM55_RS07085 IPR026881 WYL domain DM55_RS07090 IPR012136 NADP transhydrogenase, beta subunit DM55_RS07090 IPR029035 DHS-like NAD/FAD-binding domain DM55_RS07095 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal DM55_RS07100 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DM55_RS07100 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DM55_RS07100 IPR016040 NAD(P)-binding domain DM55_RS07105 IPR000086 NUDIX hydrolase domain DM55_RS07105 IPR015797 NUDIX hydrolase domain-like DM55_RS07110 IPR004506 tRNA-specific 2-thiouridylase DM55_RS07110 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS07110 IPR023382 Adenine nucleotide alpha hydrolase-like domains DM55_RS07115 IPR002932 Glutamate synthase domain DM55_RS07115 IPR013785 Aldolase-type TIM barrel DM55_RS07115 IPR024188 Glutamate synthase large subunit-like protein DM55_RS07115 IPR027283 Glutamate synthase large subunit-like protein, bacteria DM55_RS07120 IPR004045 Glutathione S-transferase, N-terminal DM55_RS07120 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS07120 IPR012336 Thioredoxin-like fold DM55_RS07125 IPR000994 Peptidase M24, structural domain DM55_RS07125 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DM55_RS07125 IPR007865 Aminopeptidase P, N-terminal DM55_RS07125 IPR028980 Creatinase/Aminopeptidase P, N-terminal DM55_RS07125 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DM55_RS07130 IPR002938 Monooxygenase, FAD-binding DM55_RS07130 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 DM55_RS07130 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site DM55_RS07130 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS07135 IPR001269 tRNA-dihydrouridine synthase DM55_RS07135 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 DM55_RS07135 IPR013785 Aldolase-type TIM barrel DM55_RS07135 IPR018517 tRNA-dihydrouridine synthase, conserved site DM55_RS07135 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal DM55_RS07135 IPR032887 DM55_RS07135 DM55_RS07140 IPR002197 DNA binding HTH domain, Fis-type DM55_RS07140 IPR005412 DNA-binding protein Fis DM55_RS07140 IPR009057 Homeodomain-like DM55_RS07145 IPR002695 AICARFT/IMPCHase bienzyme DM55_RS07145 IPR011607 Methylglyoxal synthase-like domain DM55_RS07145 IPR016193 Cytidine deaminase-like DM55_RS07145 IPR024051 AICAR transformylase domain DM55_RS07155 IPR002176 Crossover junction endodeoxyribonuclease RuvC DM55_RS07155 IPR012337 Ribonuclease H-like domain DM55_RS07155 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site DM55_RS07160 IPR000085 Bacterial DNA recombination protein RuvA DM55_RS07160 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DM55_RS07160 IPR010994 RuvA domain 2-like DM55_RS07160 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal DM55_RS07160 IPR012340 Nucleic acid-binding, OB-fold DM55_RS07160 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial DM55_RS07165 IPR003593 AAA+ ATPase domain DM55_RS07165 IPR004605 DNA helicase, Holliday junction RuvB type DM55_RS07165 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal DM55_RS07165 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal DM55_RS07165 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07165 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07170 IPR018713 Domain of unknown function DUF2236 DM55_RS07175 IPR003115 ParB/Sulfiredoxin DM55_RS07175 IPR014956 Putative ParB-like nuclease DM55_RS07180 IPR013078 Histidine phosphatase superfamily, clade-1 DM55_RS07180 IPR029033 Histidine phosphatase superfamily DM55_RS07185 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase DM55_RS07185 IPR023509 D-Tyr tRNAtyr deacylase-like domain DM55_RS07190 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS07190 IPR002305 Aminoacyl-tRNA synthetase, class Ic DM55_RS07190 IPR002307 Tyrosine-tRNA ligase DM55_RS07190 IPR002942 RNA-binding S4 domain DM55_RS07190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS07190 IPR024088 Tyrosine-tRNA ligase, bacterial-type DM55_RS07190 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 DM55_RS07195 IPR005338 Anhydro-N-acetylmuramic acid kinase DM55_RS07200 IPR004045 Glutathione S-transferase, N-terminal DM55_RS07200 IPR004046 Glutathione S-transferase, C-terminal DM55_RS07200 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS07200 IPR012336 Thioredoxin-like fold DM55_RS07205 IPR004045 Glutathione S-transferase, N-terminal DM55_RS07205 IPR004046 Glutathione S-transferase, C-terminal DM55_RS07205 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS07205 IPR012336 Thioredoxin-like fold DM55_RS07210 IPR009057 Homeodomain-like DM55_RS07210 IPR018060 DNA binding HTH domain, AraC-type DM55_RS07210 IPR032783 DM55_RS07210 DM55_RS07215 IPR000361 FeS cluster biogenesis DM55_RS07215 IPR016092 FeS cluster insertion protein DM55_RS07215 IPR017870 FeS cluster insertion, C-terminal, conserved site DM55_RS07215 IPR023063 Iron-sulfur cluster insertion protein ErpA DM55_RS07220 IPR000754 Ribosomal protein S9 DM55_RS07220 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS07220 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS07220 IPR020574 Ribosomal protein S9, conserved site DM55_RS07220 IPR023035 Ribosomal protein S9, bacterial/plastid DM55_RS07225 IPR005822 Ribosomal protein L13 DM55_RS07225 IPR005823 Ribosomal protein L13, bacterial-type DM55_RS07225 IPR023564 Ribosomal protein L13 domain DM55_RS07230 IPR008490 Transposase InsH, N-terminal DM55_RS07230 IPR025668 Transposase DDE domain DM55_RS07235 IPR006218 DAHP synthetase I/KDSA DM55_RS07235 IPR006219 DHAP synthase, class 1 DM55_RS07235 IPR013785 Aldolase-type TIM barrel DM55_RS07240 IPR002510 TldD/PmbA DM55_RS07240 IPR025502 TldD DM55_RS07245 IPR003010 Carbon-nitrogen hydrolase DM55_RS07250 IPR011836 Conserved hypothetical protein CHP02099 DM55_RS07250 IPR025263 Domain of unknown function DUF3971 DM55_RS07250 IPR032712 DM55_RS07250 DM55_RS07255 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain DM55_RS07255 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase DM55_RS07255 IPR023057 Glutamate-ammonia-ligase adenylyltransferase DM55_RS07260 IPR003395 RecF/RecN/SMC, N-terminal DM55_RS07260 IPR003593 AAA+ ATPase domain DM55_RS07260 IPR004604 DNA recombination/repair protein RecN DM55_RS07260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07265 IPR002504 Inorganic polyphosphate/ATP-NAD kinase DM55_RS07265 IPR016064 ATP-NAD kinase-like domain DM55_RS07265 IPR017437 ATP-NAD kinase, PpnK-type, all-beta DM55_RS07265 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 DM55_RS07270 IPR002571 Heat-inducible transcription repressor HrcA DM55_RS07270 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain DM55_RS07270 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07270 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal DM55_RS07270 IPR029016 GAF domain-like DM55_RS07275 IPR001015 Ferrochelatase DM55_RS07275 IPR019772 Ferrochelatase, active site DM55_RS07280 IPR002942 RNA-binding S4 domain DM55_RS07280 IPR025708 Heat shock protein 15 DM55_RS07285 IPR000740 GrpE nucleotide exchange factor DM55_RS07285 IPR009012 GrpE nucleotide exchange factor, head DM55_RS07285 IPR013805 GrpE nucleotide exchange factor, coiled-coil DM55_RS07290 IPR012336 Thioredoxin-like fold DM55_RS07295 IPR012725 Chaperone DnaK DM55_RS07295 IPR013126 Heat shock protein 70 family DM55_RS07295 IPR018181 Heat shock protein 70, conserved site DM55_RS07295 IPR029047 Heat shock protein 70kD, peptide-binding domain DM55_RS07295 IPR029048 Heat shock protein 70kD, C-terminal domain DM55_RS07300 IPR001305 Heat shock protein DnaJ, cysteine-rich domain DM55_RS07300 IPR001623 DnaJ domain DM55_RS07300 IPR002939 Chaperone DnaJ, C-terminal DM55_RS07300 IPR008971 HSP40/DnaJ peptide-binding DM55_RS07300 IPR012724 Chaperone DnaJ DM55_RS07300 IPR018253 DnaJ domain, conserved site DM55_RS07305 IPR001544 Aminotransferase, class IV DM55_RS07305 IPR005801 ADC synthase DM55_RS07305 IPR015890 Chorismate binding, C-terminal DM55_RS07305 IPR019999 Anthranilate synthase component I - like DM55_RS07310 IPR003700 Ketopantoate hydroxymethyltransferase DM55_RS07310 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain DM55_RS07315 IPR002624 Deoxynucleoside kinase DM55_RS07315 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07315 IPR031314 DM55_RS07315 DM55_RS07320 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK DM55_RS07325 IPR002646 Poly A polymerase, head domain DM55_RS07325 IPR010206 Poly(A) polymerase I DM55_RS07325 IPR025866 Polymerase A arginine-rich C-terminal domain DM55_RS07325 IPR032828 DM55_RS07325 DM55_RS07330 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like DM55_RS07330 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial DM55_RS07330 IPR023214 HAD-like domain DM55_RS07335 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) DM55_RS07335 IPR017788 DnaA regulatory inactivator Hda DM55_RS07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07340 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase DM55_RS07340 IPR010918 AIR synthase-related protein, C-terminal domain DM55_RS07340 IPR016188 PurM, N-terminal-like DM55_RS07345 IPR011944 Steroid delta5-4-isomerase DM55_RS07345 IPR027843 Domain of unknown function DUF4440 DM55_RS07345 IPR032710 DM55_RS07345 DM55_RS07350 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase DM55_RS07350 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07355 IPR002099 DNA mismatch repair protein family DM55_RS07355 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS07355 IPR013507 DNA mismatch repair protein, C-terminal DM55_RS07355 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS07355 IPR014762 DNA mismatch repair, conserved site DM55_RS07355 IPR014790 MutL, C-terminal, dimerisation DM55_RS07355 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS07355 IPR020667 DNA mismatch repair protein, MutL DM55_RS07360 IPR032816 DM55_RS07360 DM55_RS07360 IPR032818 DM55_RS07360 DM55_RS07365 IPR006685 Mechanosensitive ion channel MscS DM55_RS07365 IPR010920 Like-Sm (LSM) domain DM55_RS07365 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DM55_RS07365 IPR011066 Mechanosensitive ion channel MscS, C-terminal DM55_RS07370 IPR026869 Putative glutamine amidotransferase type 2 DM55_RS07370 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS07375 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal DM55_RS07375 IPR005835 Nucleotidyl transferase DM55_RS07375 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase DM55_RS07375 IPR011051 RmlC-like cupin domain DM55_RS07375 IPR014710 RmlC-like jelly roll fold DM55_RS07375 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS07380 IPR007833 Capsule polysaccharide biosynthesis DM55_RS07385 IPR001296 Glycosyl transferase, family 1 DM55_RS07390 IPR003715 Polysaccharide export protein DM55_RS07400 IPR000412 ABC-2 transporter DM55_RS07400 IPR013525 ABC-2 type transporter DM55_RS07405 IPR003439 ABC transporter-like DM55_RS07405 IPR003593 AAA+ ATPase domain DM55_RS07405 IPR017871 ABC transporter, conserved site DM55_RS07405 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07410 IPR001296 Glycosyl transferase, family 1 DM55_RS07415 IPR005331 Sulfotransferase DM55_RS07415 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07425 IPR001296 Glycosyl transferase, family 1 DM55_RS07425 IPR025282 Domain of unknown function DUF4214 DM55_RS07435 IPR005913 dTDP-4-dehydrorhamnose reductase DM55_RS07435 IPR016040 NAD(P)-binding domain DM55_RS07435 IPR029903 DM55_RS07435 DM55_RS07440 IPR016040 NAD(P)-binding domain DM55_RS07445 IPR001174 Galactokinase/homoserine kinase DM55_RS07445 IPR006204 GHMP kinase N-terminal domain DM55_RS07445 IPR013750 GHMP kinase, C-terminal domain DM55_RS07445 IPR014606 D,D-heptose 7-phosphate kinase DM55_RS07445 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS07445 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS07450 IPR001347 Sugar isomerase (SIS) DM55_RS07450 IPR004515 Phosphoheptose isomerase DM55_RS07455 IPR005835 Nucleotidyl transferase DM55_RS07455 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS07460 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase DM55_RS07460 IPR006543 Histidinol-phosphate phosphatase DM55_RS07460 IPR006549 HAD-superfamily hydrolase,subfamily IIIA DM55_RS07460 IPR023214 HAD-like domain DM55_RS07465 IPR007833 Capsule polysaccharide biosynthesis DM55_RS07470 IPR002347 Glucose/ribitol dehydrogenase DM55_RS07470 IPR016040 NAD(P)-binding domain DM55_RS07470 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS07475 IPR000917 Sulfatase DM55_RS07475 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha DM55_RS07475 IPR017850 Alkaline-phosphatase-like, core domain DM55_RS07480 IPR001227 Acyl transferase domain DM55_RS07480 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site DM55_RS07480 IPR009081 Acyl carrier protein-like DM55_RS07480 IPR011032 GroES (chaperonin 10)-like DM55_RS07480 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS07480 IPR013968 Polyketide synthase, KR DM55_RS07480 IPR014030 Beta-ketoacyl synthase, N-terminal DM55_RS07480 IPR014031 Beta-ketoacyl synthase, C-terminal DM55_RS07480 IPR014043 Acyl transferase DM55_RS07480 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS07480 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DM55_RS07480 IPR016039 Thiolase-like DM55_RS07480 IPR016040 NAD(P)-binding domain DM55_RS07480 IPR018201 Beta-ketoacyl synthase, active site DM55_RS07480 IPR020801 Polyketide synthase, acyl transferase domain DM55_RS07480 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS07480 IPR020807 Polyketide synthase, dehydratase domain DM55_RS07480 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DM55_RS07480 IPR020843 Polyketide synthase, enoylreductase DM55_RS07480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS07480 IPR032821 DM55_RS07480 DM55_RS07485 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase DM55_RS07485 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal DM55_RS07485 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal DM55_RS07485 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS07490 IPR004839 Aminotransferase, class I/classII DM55_RS07490 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS07490 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS07490 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS07495 IPR000182 GNAT domain DM55_RS07495 IPR016181 Acyl-CoA N-acyltransferase DM55_RS07500 IPR011040 Sialidases DM55_RS07505 IPR002514 Transposase IS3/IS911family DM55_RS07505 IPR009057 Homeodomain-like DM55_RS07510 IPR001584 Integrase, catalytic core DM55_RS07510 IPR012337 Ribonuclease H-like domain DM55_RS07510 IPR025948 HTH-like domain DM55_RS07515 IPR003795 Protein of unknown function DUF192 DM55_RS07520 IPR000640 Translation elongation factor EFG, V domain DM55_RS07520 IPR000795 Elongation factor, GTP-binding domain DM55_RS07520 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 DM55_RS07520 IPR004540 Translation elongation factor EFG/EF2 DM55_RS07520 IPR005225 Small GTP-binding protein domain DM55_RS07520 IPR005517 Translation elongation factor EFG/EF2, domain IV DM55_RS07520 IPR009000 Translation protein, beta-barrel domain DM55_RS07520 IPR009022 Elongation factor G, III-V domain DM55_RS07520 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS07520 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS07520 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07520 IPR031157 DM55_RS07520 DM55_RS07530 IPR001395 Aldo/keto reductase DM55_RS07530 IPR020471 Aldo/keto reductase subgroup DM55_RS07530 IPR023210 NADP-dependent oxidoreductase domain DM55_RS07535 IPR000524 Transcription regulator HTH, GntR DM55_RS07535 IPR011663 UbiC transcription regulator-associated DM55_RS07535 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07535 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DM55_RS07545 IPR002020 Citrate synthase-like DM55_RS07545 IPR016142 Citrate synthase-like, large alpha subdomain DM55_RS07545 IPR016143 Citrate synthase-like, small alpha subdomain DM55_RS07550 IPR011051 RmlC-like cupin domain DM55_RS07550 IPR021317 Protein of unknown function DUF2917 DM55_RS07555 IPR004638 Drug resistance transporter EmrB/QacA subfamily DM55_RS07555 IPR011701 Major facilitator superfamily DM55_RS07555 IPR020846 Major facilitator superfamily domain DM55_RS07560 IPR001633 EAL domain DM55_RS07560 IPR029151 Periplasmic sensor domain-like DM55_RS07565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS07570 IPR003710 Ketopantoate reductase ApbA/PanE DM55_RS07570 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS07570 IPR013328 Dehydrogenase, multihelical DM55_RS07570 IPR013332 Ketopantoate reductase, N-terminal domain DM55_RS07570 IPR013752 Ketopantoate reductase, C-terminal domain DM55_RS07570 IPR016040 NAD(P)-binding domain DM55_RS07575 IPR009305 Protein of unknown function DUF962 DM55_RS07580 IPR000595 Cyclic nucleotide-binding domain DM55_RS07580 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07580 IPR012318 Helix-turn-helix motif, Crp-type DM55_RS07580 IPR014710 RmlC-like jelly roll fold DM55_RS07580 IPR018490 Cyclic nucleotide-binding-like DM55_RS07585 IPR003370 Chromate transporter DM55_RS07585 IPR014047 Chromate transporter, long chain DM55_RS07595 IPR002514 Transposase IS3/IS911family DM55_RS07595 IPR009057 Homeodomain-like DM55_RS07600 IPR009822 YaeQ DM55_RS07600 IPR011335 Restriction endonuclease type II-like DM55_RS07605 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DM55_RS07605 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DM55_RS07610 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DM55_RS07610 IPR004026 Ada DNA repair, metal-binding DM55_RS07610 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DM55_RS07610 IPR009057 Homeodomain-like DM55_RS07610 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07610 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DM55_RS07610 IPR016221 Bifunctional regulatory protein Ada DM55_RS07610 IPR018060 DNA binding HTH domain, AraC-type DM55_RS07615 IPR003265 HhH-GPD domain DM55_RS07615 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal DM55_RS07615 IPR011257 DNA glycosylase DM55_RS07615 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DM55_RS07620 IPR006334 Glutamate--cysteine ligase, monofunctional DM55_RS07620 IPR007370 Glutamate--cysteine ligase DM55_RS07625 IPR000943 RNA polymerase sigma-70 DM55_RS07625 IPR007624 RNA polymerase sigma-70 region 3 DM55_RS07625 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS07625 IPR007630 RNA polymerase sigma-70 region 4 DM55_RS07625 IPR009042 RNA polymerase sigma-70 region 1.2 DM55_RS07625 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07625 IPR013324 RNA polymerase sigma factor, region 3/4 DM55_RS07625 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS07625 IPR014284 RNA polymerase sigma-70 like domain DM55_RS07640 IPR012899 LTXXQ motif family protein DM55_RS07645 IPR000847 Transcription regulator HTH, LysR DM55_RS07645 IPR005119 LysR, substrate-binding DM55_RS07645 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07650 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein DM55_RS07655 IPR000286 Histone deacetylase superfamily DM55_RS07655 IPR023801 Histone deacetylase domain DM55_RS07660 IPR003010 Carbon-nitrogen hydrolase DM55_RS07660 IPR017755 N-carbamoylputrescine amidase DM55_RS07670 IPR006430 Phage portal protein, PBSX family DM55_RS07670 IPR006944 Bacteriophage/Gene transfer agent portal protein DM55_RS07670 IPR030935 DM55_RS07670 DM55_RS07680 IPR021225 Protein of unknown function DUF2778 DM55_RS07685 IPR001584 Integrase, catalytic core DM55_RS07685 IPR012337 Ribonuclease H-like domain DM55_RS07685 IPR025948 HTH-like domain DM55_RS07690 IPR002514 Transposase IS3/IS911family DM55_RS07690 IPR009057 Homeodomain-like DM55_RS07700 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS07700 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS07700 IPR032877 DM55_RS07700 DM55_RS07710 IPR003736 Phenylacetic acid degradation-related domain DM55_RS07710 IPR006683 Thioesterase superfamily DM55_RS07710 IPR029069 HotDog domain DM55_RS07715 IPR002641 Patatin/Phospholipase A2-related DM55_RS07715 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS07720 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM55_RS07720 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DM55_RS07720 IPR016040 NAD(P)-binding domain DM55_RS07725 IPR000847 Transcription regulator HTH, LysR DM55_RS07725 IPR005119 LysR, substrate-binding DM55_RS07725 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07730 IPR000380 DNA topoisomerase, type IA DM55_RS07730 IPR003601 DNA topoisomerase, type IA, domain 2 DM55_RS07730 IPR003602 DNA topoisomerase, type IA, DNA-binding domain DM55_RS07730 IPR005738 DNA topoisomerase III DM55_RS07730 IPR006171 Toprim domain DM55_RS07730 IPR013497 DNA topoisomerase, type IA, central DM55_RS07730 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DM55_RS07730 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DM55_RS07730 IPR023405 DNA topoisomerase, type IA, core domain DM55_RS07730 IPR023406 DNA topoisomerase, type IA, active site DM55_RS07730 IPR025589 Topoisomerase C-terminal repeat DM55_RS07735 IPR012336 Thioredoxin-like fold DM55_RS07735 IPR013766 Thioredoxin domain DM55_RS07740 IPR003488 DNA recombination-mediator protein A DM55_RS07740 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07745 IPR001584 Integrase, catalytic core DM55_RS07745 IPR012337 Ribonuclease H-like domain DM55_RS07745 IPR025948 HTH-like domain DM55_RS07750 IPR003488 DNA recombination-mediator protein A DM55_RS07750 IPR010994 RuvA domain 2-like DM55_RS07755 IPR000181 Formylmethionine deformylase DM55_RS07755 IPR023635 Peptide deformylase DM55_RS07760 IPR001555 Phosphoribosylglycinamide formyltransferase, active site DM55_RS07760 IPR002376 Formyl transferase, N-terminal DM55_RS07760 IPR005793 Formyl transferase, C-terminal DM55_RS07760 IPR005794 Methionyl-tRNA formyltransferase DM55_RS07760 IPR011034 Formyl transferase, C-terminal-like DM55_RS07765 IPR001123 Lysine-type exporter protein (LYSE/YGGA) DM55_RS07770 IPR001915 Peptidase M48 DM55_RS07770 IPR022919 Peptidase M48, protease HtpX, putative DM55_RS07775 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p DM55_RS07775 IPR004573 rRNA small subunit methyltransferase B DM55_RS07775 IPR006027 NusB/RsmB/TIM44 DM55_RS07775 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site DM55_RS07775 IPR023267 RNA (C5-cytosine) methyltransferase DM55_RS07775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS07780 IPR025500 Protein of unknown function DUF4390 DM55_RS07785 IPR000014 PAS domain DM55_RS07785 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS07785 IPR003660 HAMP linker domain DM55_RS07785 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS07785 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS07785 IPR013656 PAS fold-4 DM55_RS07785 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator DM55_RS07790 IPR001789 Signal transduction response regulator, receiver domain DM55_RS07790 IPR002197 DNA binding HTH domain, Fis-type DM55_RS07790 IPR009057 Homeodomain-like DM55_RS07790 IPR011006 CheY-like superfamily DM55_RS07800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS07800 IPR018317 Queuosine biosynthesis protein QueC DM55_RS07805 IPR024924 7-carboxy-7-deazaguanine synthase-like DM55_RS07805 IPR030977 DM55_RS07805 DM55_RS07810 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein DM55_RS07815 IPR005000 HpcH/HpaI aldolase/citrate lyase domain DM55_RS07815 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain DM55_RS07820 IPR006597 Sel1-like DM55_RS07820 IPR011990 Tetratricopeptide-like helical domain DM55_RS07825 IPR001182 Cell cycle protein FtsW/RodA DM55_RS07825 IPR011923 Rod shape-determining protein RodA DM55_RS07825 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site DM55_RS07830 IPR001460 Penicillin-binding protein, transpeptidase DM55_RS07830 IPR005311 Penicillin-binding protein, dimerisation domain DM55_RS07830 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS07830 IPR017790 Penicillin-binding protein 2 DM55_RS07835 IPR007227 Cell shape-determining protein MreD DM55_RS07835 IPR026034 Cell shape-determining protein MreD, proteobacterial type DM55_RS07840 IPR007221 Rod shape-determining protein MreC DM55_RS07845 IPR004753 Cell shape determining protein MreB/Mrl DM55_RS07850 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit DM55_RS07855 IPR000120 Amidase DM55_RS07855 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit DM55_RS07855 IPR020556 Amidase, conserved site DM55_RS07855 IPR023631 Amidase signature domain DM55_RS07860 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related DM55_RS07860 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit DM55_RS07860 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic DM55_RS07860 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site DM55_RS07860 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E DM55_RS07860 IPR018027 Asn/Gln amidotransferase DM55_RS07860 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DM55_RS07865 IPR016898 Polyphosphate kinase 2 DM55_RS07865 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 DM55_RS07865 IPR022488 Polyphosphate kinase-2-related DM55_RS07865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS07870 IPR004808 AP endonuclease 1 DM55_RS07870 IPR005135 Endonuclease/exonuclease/phosphatase DM55_RS07880 IPR010895 CHRD DM55_RS07885 IPR002168 Lipase, GDXG, active site DM55_RS07885 IPR013094 Alpha/beta hydrolase fold-3 DM55_RS07885 IPR029058 Alpha/Beta hydrolase fold DM55_RS07890 IPR024787 EcsC protein DM55_RS07895 IPR011701 Major facilitator superfamily DM55_RS07895 IPR020846 Major facilitator superfamily domain DM55_RS07900 IPR000835 MarR-type HTH domain DM55_RS07900 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07905 IPR002818 ThiJ/PfpI DM55_RS07905 IPR006286 Peptidase C56, PfpI DM55_RS07905 IPR029062 Class I glutamine amidotransferase-like DM55_RS07910 IPR001608 Alanine racemase, N-terminal DM55_RS07910 IPR026956 D-serine dehydratase-like domain DM55_RS07910 IPR029066 PLP-binding barrel DM55_RS07915 IPR000281 Helix-turn-helix protein RpiR DM55_RS07915 IPR001347 Sugar isomerase (SIS) DM55_RS07915 IPR009057 Homeodomain-like DM55_RS07915 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS07920 IPR011059 Metal-dependent hydrolase, composite domain DM55_RS07920 IPR013108 Amidohydrolase 3 DM55_RS07920 IPR023100 D-aminoacylase, insert domain DM55_RS07920 IPR032466 DM55_RS07920 DM55_RS07930 IPR006175 YjgF/Yer057p/UK114 family DM55_RS07930 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like DM55_RS07935 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 DM55_RS07935 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal DM55_RS07935 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF DM55_RS07940 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site DM55_RS07940 IPR001721 ACT-like domain DM55_RS07940 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS07940 IPR005787 Threonine dehydratase, biosynthetic DM55_RS07950 IPR004017 Cysteine-rich domain DM55_RS07950 IPR004113 FAD-linked oxidase, C-terminal DM55_RS07950 IPR006094 FAD linked oxidase, N-terminal DM55_RS07950 IPR009051 Alpha-helical ferredoxin DM55_RS07950 IPR016164 FAD-linked oxidase-like, C-terminal DM55_RS07950 IPR016166 FAD-binding, type 2 DM55_RS07950 IPR016167 FAD-binding, type 2, subdomain 1 DM55_RS07950 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS07950 IPR021817 Protein of unknown function DUF3400 DM55_RS07950 IPR022153 Protein of unknown function DUF3683 DM55_RS07955 IPR001310 Histidine triad (HIT) protein DM55_RS07955 IPR011146 HIT-like domain DM55_RS07960 IPR010376 Domain of unknown function, DUF971 DM55_RS07965 IPR004033 UbiE/COQ5 methyltransferase DM55_RS07965 IPR023576 UbiE/COQ5 methyltransferase, conserved site DM55_RS07965 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS07970 IPR007379 Tim44-like domain DM55_RS07970 IPR032710 DM55_RS07970 DM55_RS07975 IPR003033 SCP2 sterol-binding domain DM55_RS07980 IPR004147 UbiB domain DM55_RS07980 IPR010232 Probable protein kinase UbiB DM55_RS07980 IPR011009 Protein kinase-like domain DM55_RS07985 IPR008854 TPMT family DM55_RS07985 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS07990 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain DM55_RS07995 IPR007462 Protein of unknown function DUF502 DM55_RS08000 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb DM55_RS08000 IPR004115 GAD-like domain DM55_RS08000 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) DM55_RS08000 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DM55_RS08000 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type DM55_RS08000 IPR012340 Nucleic acid-binding, OB-fold DM55_RS08000 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like DM55_RS08000 IPR029351 GAD domain DM55_RS08005 IPR000086 NUDIX hydrolase domain DM55_RS08005 IPR003564 dATP pyrophosphohydrolase DM55_RS08005 IPR015797 NUDIX hydrolase domain-like DM55_RS08010 IPR001736 Phospholipase D/Transphosphatidylase DM55_RS08010 IPR025202 Phospholipase D-like domain DM55_RS08010 IPR030872 DM55_RS08010 DM55_RS08015 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS08015 IPR009057 Homeodomain-like DM55_RS08015 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DM55_RS08015 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS08020 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS08020 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS08020 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS08020 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS08020 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria DM55_RS08020 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain DM55_RS08025 IPR001753 Crotonase superfamily DM55_RS08025 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS08025 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS08025 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS08025 IPR013328 Dehydrogenase, multihelical DM55_RS08025 IPR016040 NAD(P)-binding domain DM55_RS08025 IPR029045 ClpP/crotonase-like domain DM55_RS08030 IPR002155 Thiolase DM55_RS08030 IPR016039 Thiolase-like DM55_RS08030 IPR020610 Thiolase, active site DM55_RS08030 IPR020613 Thiolase, conserved site DM55_RS08030 IPR020615 Thiolase, acyl-enzyme intermediate active site DM55_RS08030 IPR020616 Thiolase, N-terminal DM55_RS08030 IPR020617 Thiolase, C-terminal DM55_RS08035 IPR001753 Crotonase superfamily DM55_RS08035 IPR029045 ClpP/crotonase-like domain DM55_RS08040 IPR003786 Protein FdhD DM55_RS08040 IPR016193 Cytidine deaminase-like DM55_RS08045 IPR013481 Conserved hypothetical protein CHP02664, nitrate reductase-associated DM55_RS08050 IPR006683 Thioesterase superfamily DM55_RS08050 IPR029069 HotDog domain DM55_RS08055 IPR003439 ABC transporter-like DM55_RS08055 IPR003593 AAA+ ATPase domain DM55_RS08055 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS08055 IPR017871 ABC transporter, conserved site DM55_RS08055 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08065 IPR005835 Nucleotidyl transferase DM55_RS08065 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS08070 IPR002575 Aminoglycoside phosphotransferase DM55_RS08070 IPR011009 Protein kinase-like domain DM55_RS08075 IPR007543 Organic solvent tolerance protein, C-terminal DM55_RS08075 IPR020889 Lipopolysaccharide assembly, LptD DM55_RS08080 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type DM55_RS08080 IPR015391 SurA N-terminal DM55_RS08080 IPR023034 Peptidyl-prolyl isomerase SurA DM55_RS08080 IPR027304 Trigger factor/SurA domain DM55_RS08085 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA DM55_RS08085 IPR024084 Isopropylmalate dehydrogenase-like domain DM55_RS08090 IPR001737 Ribosomal RNA adenine methylase transferase DM55_RS08090 IPR011530 Ribosomal RNA adenine dimethylase DM55_RS08090 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal DM55_RS08090 IPR023165 rRNA adenine dimethylase-like DM55_RS08090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS08095 IPR000620 Drug/metabolite transporter DM55_RS08100 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DM55_RS08100 IPR004361 Glyoxalase I DM55_RS08100 IPR018146 Glyoxalase I, conserved site DM55_RS08100 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DM55_RS08105 IPR002725 Protein of unknown function DUF45 DM55_RS08110 IPR002123 Phospholipid/glycerol acyltransferase DM55_RS08115 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase DM55_RS08115 IPR006543 Histidinol-phosphate phosphatase DM55_RS08115 IPR006549 HAD-superfamily hydrolase,subfamily IIIA DM55_RS08115 IPR023214 HAD-like domain DM55_RS08120 IPR006674 HD domain DM55_RS08120 IPR008909 DALR anticodon binding DM55_RS08120 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding DM55_RS08120 IPR015944 Glycine-tRNA ligase, beta subunit DM55_RS08125 IPR002310 Glycine-tRNA ligase, alpha subunit DM55_RS08130 IPR003010 Carbon-nitrogen hydrolase DM55_RS08130 IPR004563 Apolipoprotein N-acyltransferase DM55_RS08135 IPR000644 CBS domain DM55_RS08135 IPR005170 Transporter-associated domain DM55_RS08135 IPR016166 FAD-binding, type 2 DM55_RS08135 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 DM55_RS08140 IPR006840 ChaC-like protein DM55_RS08140 IPR013024 Butirosin biosynthesis, BtrG-like DM55_RS08145 IPR002036 Endoribonuclease YbeY DM55_RS08145 IPR020549 Endoribonuclease YbeY, conserved site DM55_RS08145 IPR023091 Metalloprotease catalytic domain, predicted DM55_RS08150 IPR003714 PhoH-like protein DM55_RS08150 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08155 IPR002792 TRAM domain DM55_RS08155 IPR005839 Methylthiotransferase DM55_RS08155 IPR006463 tRNA-i(6)A37 modification enzyme MiaB DM55_RS08155 IPR006638 Elongator protein 3/MiaB/NifB DM55_RS08155 IPR007197 Radical SAM DM55_RS08155 IPR013848 Methylthiotransferase, N-terminal DM55_RS08155 IPR020612 Methylthiotransferase, conserved site DM55_RS08155 IPR023404 Radical SAM, alpha/beta horseshoe DM55_RS08155 IPR023970 Methylthiotransferase/radical SAM-type protein DM55_RS08160 IPR000847 Transcription regulator HTH, LysR DM55_RS08160 IPR005119 LysR, substrate-binding DM55_RS08160 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS08165 IPR011701 Major facilitator superfamily DM55_RS08165 IPR020846 Major facilitator superfamily domain DM55_RS08170 IPR001387 Cro/C1-type helix-turn-helix domain DM55_RS08170 IPR010982 Lambda repressor-like, DNA-binding domain DM55_RS08170 IPR011051 RmlC-like cupin domain DM55_RS08170 IPR013096 Cupin 2, conserved barrel DM55_RS08170 IPR014710 RmlC-like jelly roll fold DM55_RS08175 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB DM55_RS08175 IPR017945 DHBP synthase RibB-like alpha/beta domain DM55_RS08180 IPR006439 HAD hydrolase, subfamily IA DM55_RS08180 IPR023214 HAD-like domain DM55_RS08185 IPR000620 Drug/metabolite transporter DM55_RS08195 IPR001962 Asparagine synthase DM55_RS08195 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS08195 IPR017932 Glutamine amidotransferase type 2 domain DM55_RS08195 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS08200 IPR001986 Enolpyruvate transferase domain DM55_RS08200 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase DM55_RS08200 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DM55_RS08200 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site DM55_RS08205 IPR001986 Enolpyruvate transferase domain DM55_RS08205 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase DM55_RS08205 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DM55_RS08210 IPR006175 YjgF/Yer057p/UK114 family DM55_RS08210 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like DM55_RS08215 IPR000425 Major intrinsic protein DM55_RS08215 IPR023271 Aquaporin-like DM55_RS08220 IPR000577 DM55_RS08220 DM55_RS08220 IPR005999 Glycerol kinase DM55_RS08220 IPR018483 Carbohydrate kinase, FGGY, conserved site DM55_RS08220 IPR018484 Carbohydrate kinase, FGGY, N-terminal DM55_RS08220 IPR018485 Carbohydrate kinase, FGGY, C-terminal DM55_RS08225 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase DM55_RS08225 IPR006076 FAD dependent oxidoreductase DM55_RS08225 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS08225 IPR031656 DM55_RS08225 DM55_RS08235 IPR019056 Gene transfer agent, rcc01693-related DM55_RS08240 IPR001034 HTH DeoR N-terminal domain DM55_RS08240 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS08240 IPR014036 DeoR C-terminal sensor domain DM55_RS08240 IPR018356 Transcription regulator, HTH DeoR-type, conserved site DM55_RS08245 IPR000101 Gamma-glutamyltranspeptidase DM55_RS08245 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS08250 IPR009078 Ferritin-like superfamily DM55_RS08250 IPR012348 Ribonucleotide reductase-related DM55_RS08255 IPR012349 FMN-binding split barrel DM55_RS08260 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site DM55_RS08260 IPR001650 Helicase, C-terminal DM55_RS08260 IPR011545 DEAD/DEAH box helicase domain DM55_RS08260 IPR014001 Helicase, superfamily 1/2, ATP-binding domain DM55_RS08260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08260 IPR028622 ATP-dependent RNA helicase RhlE DM55_RS08265 IPR009056 Cytochrome c-like domain DM55_RS08265 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit DM55_RS08270 IPR009056 Cytochrome c-like domain DM55_RS08270 IPR024167 Cytochrome c4 DM55_RS08275 IPR008457 Copper resistance D DM55_RS08280 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase DM55_RS08280 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DM55_RS08280 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DM55_RS08280 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site DM55_RS08280 IPR029017 Enolase N-terminal domain-like DM55_RS08280 IPR029065 Enolase C-terminal domain-like DM55_RS08285 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V DM55_RS08285 IPR011057 Mss4-like DM55_RS08290 IPR025485 Domain of unknown function DUF4377 DM55_RS08295 IPR004843 Calcineurin-like phosphoesterase domain, apaH type DM55_RS08295 IPR008963 Purple acid phosphatase-like, N-terminal DM55_RS08295 IPR015914 Purple acid phosphatase, N-terminal DM55_RS08295 IPR029052 Metallo-dependent phosphatase-like DM55_RS08300 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS08300 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS08300 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS08300 IPR005330 MHYT DM55_RS08305 IPR001789 Signal transduction response regulator, receiver domain DM55_RS08305 IPR006674 HD domain DM55_RS08305 IPR011006 CheY-like superfamily DM55_RS08315 IPR025419 Domain of unknown function DUF4142 DM55_RS08320 IPR000014 PAS domain DM55_RS08320 IPR001610 PAC motif DM55_RS08320 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS08320 IPR013655 PAS fold-3 DM55_RS08335 IPR006260 TonB, C-terminal DM55_RS08340 IPR019637 Protein of unknown function DUF2501 DM55_RS08345 IPR007016 O-antigen ligase-related DM55_RS08345 IPR021797 Protein of unknown function DUF3366 DM55_RS08345 IPR031726 DM55_RS08345 DM55_RS08350 IPR001082 Fimbrial protein pilin DM55_RS08350 IPR012902 Prokaryotic N-terminal methylation site DM55_RS08355 IPR005496 Integral membrane protein TerC DM55_RS08355 IPR022301 Integral membrane protein YjbE DM55_RS08360 IPR003781 CoA-binding DM55_RS08360 IPR005810 Succinyl-CoA ligase, alpha subunit DM55_RS08360 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DM55_RS08360 IPR016040 NAD(P)-binding domain DM55_RS08360 IPR016102 Succinyl-CoA synthetase-like DM55_RS08360 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DM55_RS08365 IPR005809 Succinyl-CoA synthetase, beta subunit DM55_RS08365 IPR005811 ATP-citrate lyase/succinyl-CoA ligase DM55_RS08365 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type DM55_RS08365 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS08365 IPR013816 ATP-grasp fold, subdomain 2 DM55_RS08365 IPR016102 Succinyl-CoA synthetase-like DM55_RS08365 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site DM55_RS08370 IPR021312 Protein of unknown function DUF2889 DM55_RS08375 IPR003783 Regulatory protein RecX DM55_RS08375 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS08380 IPR003593 AAA+ ATPase domain DM55_RS08380 IPR013765 DNA recombination and repair protein RecA DM55_RS08380 IPR020584 DNA recombination/repair protein RecA, conserved site DM55_RS08380 IPR023400 DNA recombination and repair protein RecA, C-terminal DM55_RS08380 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08385 IPR001789 Signal transduction response regulator, receiver domain DM55_RS08385 IPR001867 Signal transduction response regulator, C-terminal DM55_RS08385 IPR011006 CheY-like superfamily DM55_RS08385 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS08390 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS08390 IPR003660 HAMP linker domain DM55_RS08390 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS08390 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS08390 IPR013727 Two-component sensor kinase N-terminal DM55_RS08395 IPR005828 General substrate transporter DM55_RS08395 IPR005829 Sugar transporter, conserved site DM55_RS08395 IPR020846 Major facilitator superfamily domain DM55_RS08405 IPR011010 DNA breaking-rejoining enzyme, catalytic core DM55_RS08405 IPR013762 Integrase-like, catalytic core DM55_RS08405 IPR023109 Integrase/recombinase, N-terminal DM55_RS08410 IPR001584 Integrase, catalytic core DM55_RS08410 IPR012337 Ribonuclease H-like domain DM55_RS08410 IPR025948 HTH-like domain DM55_RS08415 IPR002514 Transposase IS3/IS911family DM55_RS08415 IPR009057 Homeodomain-like DM55_RS08420 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain DM55_RS08420 IPR023045 Molybdenum cofactor biosynthesis C DM55_RS08420 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type DM55_RS08425 IPR001915 Peptidase M48 DM55_RS08425 IPR030873 DM55_RS08425 DM55_RS08430 IPR021332 Protein of unknown function DUF2944 DM55_RS08435 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS08435 IPR012020 AB-hydrolase YheT, putative DM55_RS08435 IPR029058 Alpha/Beta hydrolase fold DM55_RS08440 IPR009959 Polyketide cyclase SnoaL-like domain DM55_RS08440 IPR032710 DM55_RS08440 DM55_RS08445 IPR002201 Glycosyl transferase, family 9 DM55_RS08445 IPR011910 Lipopolysaccharide heptosyltransferase II DM55_RS08450 IPR019401 Zinc finger, CHCC-type DM55_RS08455 IPR001544 Aminotransferase, class IV DM55_RS08455 IPR005785 Branched-chain amino acid aminotransferase I DM55_RS08455 IPR018300 Aminotransferase, class IV, conserved site DM55_RS08460 IPR011606 Branched-chain amino acid transport, permease DM55_RS08465 IPR008407 Branched-chain amino acid transport, AzlD DM55_RS08470 IPR001576 Phosphoglycerate kinase DM55_RS08470 IPR015824 Phosphoglycerate kinase, N-terminal DM55_RS08470 IPR015901 Phosphoglycerate kinase, C-terminal DM55_RS08470 IPR015911 Phosphoglycerate kinase, conserved site DM55_RS08475 IPR001697 Pyruvate kinase DM55_RS08475 IPR011037 Pyruvate kinase-like, insert domain DM55_RS08475 IPR015793 Pyruvate kinase, barrel DM55_RS08475 IPR015794 Pyruvate kinase, alpha/beta DM55_RS08475 IPR015795 Pyruvate kinase, C-terminal DM55_RS08475 IPR015806 Pyruvate kinase, beta-barrel insert domain DM55_RS08475 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain DM55_RS08480 IPR000771 Ketose-bisphosphate aldolase, class-II DM55_RS08480 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype DM55_RS08480 IPR013785 Aldolase-type TIM barrel DM55_RS08485 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase DM55_RS08485 IPR013816 ATP-grasp fold, subdomain 2 DM55_RS08485 IPR018236 SAICAR synthetase, conserved site DM55_RS08485 IPR028923 SAICAR synthetase/ADE2, N-terminal DM55_RS08490 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain DM55_RS08490 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE DM55_RS08495 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DM55_RS08495 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit DM55_RS08495 IPR011054 Rudiment single hybrid motif DM55_RS08495 IPR013816 ATP-grasp fold, subdomain 2 DM55_RS08495 IPR016185 Pre-ATP-grasp domain DM55_RS08500 IPR005145 Putative GTP-binding controlling metal-binding domain DM55_RS08500 IPR006070 YrdC-like domain DM55_RS08500 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 DM55_RS08500 IPR017945 DHBP synthase RibB-like alpha/beta domain DM55_RS08505 IPR001087 Lipase, GDSL DM55_RS08505 IPR013830 DM55_RS08505 DM55_RS08515 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C DM55_RS08515 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS08520 IPR001789 Signal transduction response regulator, receiver domain DM55_RS08520 IPR001867 Signal transduction response regulator, C-terminal DM55_RS08520 IPR011006 CheY-like superfamily DM55_RS08520 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS08525 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS08525 IPR003660 HAMP linker domain DM55_RS08525 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS08525 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS08530 IPR001478 PDZ domain DM55_RS08530 IPR001940 Peptidase S1C DM55_RS08530 IPR009003 Trypsin-like cysteine/serine peptidase domain DM55_RS08530 IPR011782 Peptidase S1C, Do DM55_RS08535 IPR013784 Carbohydrate-binding-like fold DM55_RS08535 IPR014766 Carboxypeptidase, regulatory domain DM55_RS08540 IPR007361 Protein of unknown function DUF427 DM55_RS08545 IPR010419 Carbon monoxide dehydrogenase subunit G DM55_RS08545 IPR023393 START-like domain DM55_RS08550 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS08550 IPR009057 Homeodomain-like DM55_RS08550 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DM55_RS08550 IPR013572 Transcription regulator MAATS, C-terminal DM55_RS08550 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS08550 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DM55_RS08555 IPR006143 RND efflux pump, membrane fusion protein DM55_RS08555 IPR032317 DM55_RS08555 DM55_RS08560 IPR001036 Acriflavin resistance protein DM55_RS08560 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 DM55_RS08560 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DM55_RS08565 IPR003423 Outer membrane efflux protein DM55_RS08565 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DM55_RS08570 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS08580 IPR001584 Integrase, catalytic core DM55_RS08580 IPR012337 Ribonuclease H-like domain DM55_RS08580 IPR025948 HTH-like domain DM55_RS08585 IPR002514 Transposase IS3/IS911family DM55_RS08585 IPR009057 Homeodomain-like DM55_RS08590 IPR006043 Xanthine/uracil/vitamin C permease DM55_RS08595 IPR018484 Carbohydrate kinase, FGGY, N-terminal DM55_RS08600 IPR002818 ThiJ/PfpI DM55_RS08600 IPR009057 Homeodomain-like DM55_RS08600 IPR018060 DNA binding HTH domain, AraC-type DM55_RS08600 IPR029062 Class I glutamine amidotransferase-like DM55_RS08605 IPR002085 Alcohol dehydrogenase superfamily, zinc-type DM55_RS08605 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DM55_RS08605 IPR011032 GroES (chaperonin 10)-like DM55_RS08605 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS08605 IPR013154 Alcohol dehydrogenase GroES-like DM55_RS08605 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase DM55_RS08605 IPR016040 NAD(P)-binding domain DM55_RS08605 IPR020843 Polyketide synthase, enoylreductase DM55_RS08610 IPR000801 Putative esterase DM55_RS08610 IPR014186 S-formylglutathione hydrolase DM55_RS08610 IPR029058 Alpha/Beta hydrolase fold DM55_RS08615 IPR001626 ABC-3 DM55_RS08615 IPR029022 ABC transporter, BtuC-like DM55_RS08620 IPR003439 ABC transporter-like DM55_RS08620 IPR003593 AAA+ ATPase domain DM55_RS08620 IPR017871 ABC transporter, conserved site DM55_RS08620 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08625 IPR006127 Periplasmic solute binding protein family DM55_RS08625 IPR006128 Adhesion lipoprotein DM55_RS08630 IPR002481 Ferric-uptake regulator DM55_RS08630 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS08635 IPR002347 Glucose/ribitol dehydrogenase DM55_RS08635 IPR016040 NAD(P)-binding domain DM55_RS08635 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS08640 IPR011611 Carbohydrate kinase PfkB DM55_RS08640 IPR029056 Ribokinase-like DM55_RS08645 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ DM55_RS08645 IPR013785 Aldolase-type TIM barrel DM55_RS08650 IPR006059 Bacterial extracellular solute-binding, family 1 DM55_RS08655 IPR000515 MetI-like domain DM55_RS08660 IPR000515 MetI-like domain DM55_RS08665 IPR006439 HAD hydrolase, subfamily IA DM55_RS08665 IPR023214 HAD-like domain DM55_RS08670 IPR003439 ABC transporter-like DM55_RS08670 IPR003593 AAA+ ATPase domain DM55_RS08670 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS08670 IPR012340 Nucleic acid-binding, OB-fold DM55_RS08670 IPR013611 Transport-associated OB, type 2 DM55_RS08670 IPR017871 ABC transporter, conserved site DM55_RS08670 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08675 IPR023214 HAD-like domain DM55_RS08680 IPR000847 Transcription regulator HTH, LysR DM55_RS08680 IPR005119 LysR, substrate-binding DM55_RS08680 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS08685 IPR001466 Beta-lactamase-related DM55_RS08685 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS08690 IPR011701 Major facilitator superfamily DM55_RS08690 IPR020846 Major facilitator superfamily domain DM55_RS08695 IPR007324 Sugar-binding domain, putative DM55_RS08700 IPR000577 DM55_RS08700 DM55_RS08700 IPR006000 Xylulokinase DM55_RS08700 IPR018483 Carbohydrate kinase, FGGY, conserved site DM55_RS08700 IPR018484 Carbohydrate kinase, FGGY, N-terminal DM55_RS08700 IPR018485 Carbohydrate kinase, FGGY, C-terminal DM55_RS08705 IPR000669 Mannitol dehydrogenase DM55_RS08705 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS08705 IPR013118 Mannitol dehydrogenase, C-terminal DM55_RS08705 IPR013131 Mannitol dehydrogenase, N-terminal DM55_RS08705 IPR013328 Dehydrogenase, multihelical DM55_RS08705 IPR016040 NAD(P)-binding domain DM55_RS08710 IPR000847 Transcription regulator HTH, LysR DM55_RS08710 IPR005119 LysR, substrate-binding DM55_RS08710 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS08715 IPR000399 TPP-binding enzyme, conserved site DM55_RS08715 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DM55_RS08715 IPR012000 Thiamine pyrophosphate enzyme, central domain DM55_RS08715 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DM55_RS08715 IPR029035 DHS-like NAD/FAD-binding domain DM55_RS08715 IPR029061 Thiamin diphosphate-binding fold DM55_RS08720 IPR015590 Aldehyde dehydrogenase domain DM55_RS08720 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS08720 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS08720 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS08720 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS08725 IPR003710 Ketopantoate reductase ApbA/PanE DM55_RS08725 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS08725 IPR013328 Dehydrogenase, multihelical DM55_RS08725 IPR013332 Ketopantoate reductase, N-terminal domain DM55_RS08725 IPR013752 Ketopantoate reductase, C-terminal domain DM55_RS08725 IPR016040 NAD(P)-binding domain DM55_RS08735 IPR005829 Sugar transporter, conserved site DM55_RS08735 IPR011701 Major facilitator superfamily DM55_RS08735 IPR020846 Major facilitator superfamily domain DM55_RS08740 IPR004981 Tryptophan 2,3-dioxygenase DM55_RS08740 IPR017485 Tryptophan 2,3-dioxygenase, bacterial DM55_RS08745 IPR000192 Aminotransferase class V domain DM55_RS08745 IPR010111 Kynureninase DM55_RS08745 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS08745 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS08745 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS08750 IPR007325 Kynurenine formamidase DM55_RS08750 IPR017484 Kynurenine formamidase, bacteria DM55_RS08755 IPR000485 AsnC-type HTH domain DM55_RS08755 IPR011008 Dimeric alpha-beta barrel DM55_RS08755 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS08755 IPR019887 Transcription regulator AsnC-type, C-terminal DM55_RS08755 IPR019888 Transcription regulator AsnC-type DM55_RS08760 IPR002563 Flavin reductase-like, FMN-binding DM55_RS08760 IPR012349 FMN-binding split barrel DM55_RS08770 IPR002569 Peptide methionine sulphoxide reductase MsrA DM55_RS08770 IPR028427 Peptide methionine sulfoxide reductase DM55_RS08780 IPR002763 Protein of unknown function DUF72 DM55_RS08785 IPR003333 Mycolic acid cyclopropane synthase DM55_RS08785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS08790 IPR000659 Pyridoxamine 5'-phosphate oxidase DM55_RS08790 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain DM55_RS08790 IPR012349 FMN-binding split barrel DM55_RS08790 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal DM55_RS08790 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site DM55_RS08795 IPR000594 UBA/THIF-type NAD/FAD binding fold DM55_RS08795 IPR016040 NAD(P)-binding domain DM55_RS08810 IPR003829 Pirin, N-terminal domain DM55_RS08810 IPR008778 Pirin, C-terminal domain DM55_RS08810 IPR011051 RmlC-like cupin domain DM55_RS08810 IPR012093 Pirin DM55_RS08810 IPR014710 RmlC-like jelly roll fold DM55_RS08815 IPR000620 Drug/metabolite transporter DM55_RS08820 IPR002508 Cell wall hydrolase/autolysin, catalytic DM55_RS08820 IPR021731 AMIN domain DM55_RS08825 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE DM55_RS08825 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS08830 IPR004453 Epoxyqueuosine reductase QueG DM55_RS08830 IPR009051 Alpha-helical ferredoxin DM55_RS08830 IPR013542 Domain of unknown function DUF1730 DM55_RS08830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS08835 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site DM55_RS08835 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain DM55_RS08835 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS08835 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding DM55_RS08840 IPR002104 Integrase, catalytic DM55_RS08840 IPR004107 Integrase, SAM-like, N-terminal DM55_RS08840 IPR010998 Integrase, Lambda-type, N-terminal DM55_RS08840 IPR011010 DNA breaking-rejoining enzyme, catalytic core DM55_RS08840 IPR011932 Tyrosine recombinase XerD DM55_RS08840 IPR013762 Integrase-like, catalytic core DM55_RS08840 IPR023009 Tyrosine recombinase XerC/XerD DM55_RS08840 IPR023109 Integrase/recombinase, N-terminal DM55_RS08845 IPR000873 AMP-dependent synthetase/ligase DM55_RS08845 IPR020845 AMP-binding, conserved site DM55_RS08845 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS08850 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DM55_RS08850 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain DM55_RS08855 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY DM55_RS08860 IPR007551 Protein of unknown function DUF520 DM55_RS08865 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase DM55_RS08865 IPR006094 FAD linked oxidase, N-terminal DM55_RS08865 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal DM55_RS08865 IPR016166 FAD-binding, type 2 DM55_RS08865 IPR016167 FAD-binding, type 2, subdomain 1 DM55_RS08865 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 DM55_RS08870 IPR002292 Ornithine/putrescine carbamoyltransferase DM55_RS08870 IPR006130 Aspartate/ornithine carbamoyltransferase DM55_RS08870 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DM55_RS08870 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DM55_RS08870 IPR024904 Ornithine carbamoyltransferase DM55_RS08875 IPR021969 Protein of unknown function DUF3579 DM55_RS08880 IPR002583 Ribosomal protein S20 DM55_RS08885 IPR004268 Flagellin assembly, membrane protein MviN DM55_RS08890 IPR011990 Tetratricopeptide-like helical domain DM55_RS08890 IPR032698 DM55_RS08890 DM55_RS08895 IPR002347 Glucose/ribitol dehydrogenase DM55_RS08895 IPR016040 NAD(P)-binding domain DM55_RS08895 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS08900 IPR008490 Transposase InsH, N-terminal DM55_RS08900 IPR025668 Transposase DDE domain DM55_RS08905 IPR002355 Multicopper oxidase, copper-binding site DM55_RS08905 IPR008972 Cupredoxin DM55_RS08905 IPR011706 Multicopper oxidase, type 2 DM55_RS08905 IPR011707 Multicopper oxidase, type 3 DM55_RS08910 IPR001804 Isocitrate and isopropylmalate dehydrogenases family DM55_RS08910 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic DM55_RS08910 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site DM55_RS08910 IPR024084 Isopropylmalate dehydrogenase-like domain DM55_RS08915 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DM55_RS08915 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F DM55_RS08915 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DM55_RS08915 IPR020103 Pseudouridine synthase, catalytic domain DM55_RS08920 IPR001584 Integrase, catalytic core DM55_RS08920 IPR012337 Ribonuclease H-like domain DM55_RS08920 IPR025948 HTH-like domain DM55_RS08930 IPR011010 DNA breaking-rejoining enzyme, catalytic core DM55_RS08930 IPR023109 Integrase/recombinase, N-terminal DM55_RS08930 IPR025166 Domain of unknown function DUF4102 DM55_RS08935 IPR001584 Integrase, catalytic core DM55_RS08935 IPR012337 Ribonuclease H-like domain DM55_RS08940 IPR001584 Integrase, catalytic core DM55_RS08940 IPR012337 Ribonuclease H-like domain DM55_RS08950 IPR002514 Transposase IS3/IS911family DM55_RS08950 IPR009057 Homeodomain-like DM55_RS08960 IPR002701 Chorismate mutase DM55_RS08960 IPR008240 Chorismate mutase, periplasmic DM55_RS08960 IPR020822 Chorismate mutase, type II DM55_RS08970 IPR021333 Protein of unknown function DUF2946 DM55_RS08975 IPR000531 TonB-dependent receptor, beta-barrel DM55_RS08975 IPR012910 TonB-dependent receptor, plug DM55_RS08980 IPR011040 Sialidases DM55_RS08985 IPR012336 Thioredoxin-like fold DM55_RS08990 IPR007341 Transglycosylase-associated protein DM55_RS09015 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS09015 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS09015 IPR032877 DM55_RS09015 DM55_RS09020 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase DM55_RS09020 IPR028343 Fructose-1,6-bisphosphatase DM55_RS09020 IPR033391 DM55_RS09020 DM55_RS09025 IPR000847 Transcription regulator HTH, LysR DM55_RS09025 IPR005119 LysR, substrate-binding DM55_RS09025 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS09030 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal DM55_RS09030 IPR006276 Cobalamin-independent methionine synthase DM55_RS09030 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal DM55_RS09035 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DM55_RS09035 IPR012779 Peptidase M1, alanyl aminopeptidase DM55_RS09035 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal DM55_RS09035 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DM55_RS09040 IPR025411 Domain of unknown function DUF4136 DM55_RS09045 IPR001727 Uncharacterised protein family UPF0016 DM55_RS09050 IPR006680 Amidohydrolase 1 DM55_RS09050 IPR011059 Metal-dependent hydrolase, composite domain DM55_RS09050 IPR014311 Guanine deaminase DM55_RS09050 IPR032466 DM55_RS09050 DM55_RS09055 IPR006043 Xanthine/uracil/vitamin C permease DM55_RS09060 IPR001365 Adenosine/AMP deaminase domain DM55_RS09060 IPR006330 Adenosine/adenine deaminase DM55_RS09060 IPR028892 Adenine deaminase type 2 DM55_RS09060 IPR032466 DM55_RS09060 DM55_RS09065 IPR003777 XdhC- CoxI DM55_RS09065 IPR014308 Xanthine dehydrogenase accessory protein XdhC DM55_RS09065 IPR027051 XdhC Rossmann domain DM55_RS09070 IPR003752 Disulphide bond formation protein DsbB/BdbC DM55_RS09070 IPR022920 Disulphide bond formation protein DsbB DM55_RS09070 IPR023380 Disulphide bond formation protein DsbB-like domain DM55_RS09075 IPR000120 Amidase DM55_RS09075 IPR020556 Amidase, conserved site DM55_RS09075 IPR023631 Amidase signature domain DM55_RS09080 IPR011697 Peptidase C26 DM55_RS09080 IPR029062 Class I glutamine amidotransferase-like DM55_RS09085 IPR005828 General substrate transporter DM55_RS09085 IPR005829 Sugar transporter, conserved site DM55_RS09085 IPR020846 Major facilitator superfamily domain DM55_RS09090 IPR001440 Tetratricopeptide TPR1 DM55_RS09090 IPR002201 Glycosyl transferase, family 9 DM55_RS09090 IPR011990 Tetratricopeptide-like helical domain DM55_RS09090 IPR013105 Tetratricopeptide TPR2 DM55_RS09090 IPR019734 Tetratricopeptide repeat DM55_RS09095 IPR002938 Monooxygenase, FAD-binding DM55_RS09095 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS09100 IPR021074 Formate dehydrogenase, delta subunit DM55_RS09105 IPR001041 2Fe-2S ferredoxin-type domain DM55_RS09105 IPR006478 Formate dehydrogenase, alpha subunit DM55_RS09105 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DM55_RS09105 IPR006656 Molybdopterin oxidoreductase DM55_RS09105 IPR006657 Molydopterin dinucleotide-binding domain DM55_RS09105 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DM55_RS09105 IPR009010 Aspartate decarboxylase-like domain DM55_RS09105 IPR012675 Beta-grasp domain DM55_RS09105 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS09105 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS09105 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding DM55_RS09110 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site DM55_RS09110 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit DM55_RS09110 IPR012336 Thioredoxin-like fold DM55_RS09110 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding DM55_RS09115 IPR002023 NADH-quinone oxidoreductase subunit E-like DM55_RS09115 IPR012336 Thioredoxin-like fold DM55_RS09120 IPR000847 Transcription regulator HTH, LysR DM55_RS09120 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS09120 IPR024370 PBP domain DM55_RS09130 IPR001737 Ribosomal RNA adenine methylase transferase DM55_RS09130 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site DM55_RS09130 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS09135 IPR001584 Integrase, catalytic core DM55_RS09135 IPR012337 Ribonuclease H-like domain DM55_RS09135 IPR025948 HTH-like domain DM55_RS09140 IPR002514 Transposase IS3/IS911family DM55_RS09140 IPR009057 Homeodomain-like DM55_RS09145 IPR006346 2-phosphoglycolate phosphatase, prokaryotic DM55_RS09145 IPR006439 HAD hydrolase, subfamily IA DM55_RS09145 IPR023198 Phosphoglycolate phosphatase, domain 2 DM55_RS09145 IPR023214 HAD-like domain DM55_RS09150 IPR010233 Ubiquinone biosynthesis O-methyltransferase DM55_RS09150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS09155 IPR002368 Outer membrane protein, OmpA DM55_RS09155 IPR006664 Outer membrane protein, bacterial DM55_RS09155 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal DM55_RS09160 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DM55_RS09160 IPR005743 DNA gyrase, subunit A DM55_RS09160 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel DM55_RS09160 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain DM55_RS09160 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DM55_RS09160 IPR013760 DNA topoisomerase, type IIA-like domain DM55_RS09160 IPR024946 Arginine repressor C-terminal-like domain DM55_RS09165 IPR018637 Domain of unknown function DUF2059 DM55_RS09170 IPR000192 Aminotransferase class V domain DM55_RS09170 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS09170 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS09170 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS09170 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site DM55_RS09170 IPR022278 Phosphoserine aminotransferase DM55_RS09175 IPR001086 Prephenate dehydratase DM55_RS09175 IPR002701 Chorismate mutase DM55_RS09175 IPR002912 ACT domain DM55_RS09175 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase DM55_RS09175 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain DM55_RS09175 IPR018528 Prephenate dehydratase, conserved site DM55_RS09175 IPR020822 Chorismate mutase, type II DM55_RS09180 IPR001986 Enolpyruvate transferase domain DM55_RS09180 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase DM55_RS09180 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta DM55_RS09180 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site DM55_RS09185 IPR003136 Cytidylate kinase DM55_RS09185 IPR011994 Cytidylate kinase domain DM55_RS09185 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09190 IPR000110 Ribosomal protein S1 DM55_RS09190 IPR003029 Ribosomal protein S1, RNA-binding domain DM55_RS09190 IPR012340 Nucleic acid-binding, OB-fold DM55_RS09190 IPR022967 RNA-binding domain, S1 DM55_RS09195 IPR000119 Histone-like bacterial DNA-binding protein DM55_RS09195 IPR005685 Integration host factor, beta subunit DM55_RS09195 IPR010992 Integration host factor (IHF)-like DNA-binding domain DM55_RS09200 IPR008490 Transposase InsH, N-terminal DM55_RS09200 IPR025668 Transposase DDE domain DM55_RS09205 IPR010445 Protein of unknown function DUF1049 DM55_RS09210 IPR011990 Tetratricopeptide-like helical domain DM55_RS09210 IPR019734 Tetratricopeptide repeat DM55_RS09210 IPR030865 DM55_RS09210 DM55_RS09215 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal DM55_RS09215 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS09215 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation DM55_RS09215 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal DM55_RS09215 IPR016040 NAD(P)-binding domain DM55_RS09215 IPR017476 UDP-glucose/GDP-mannose dehydrogenase DM55_RS09215 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type DM55_RS09220 IPR011611 Carbohydrate kinase PfkB DM55_RS09220 IPR011913 RfaE bifunctional protein, domain I DM55_RS09220 IPR029056 Ribokinase-like DM55_RS09225 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain DM55_RS09225 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase DM55_RS09225 IPR016040 NAD(P)-binding domain DM55_RS09230 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DM55_RS09230 IPR010994 RuvA domain 2-like DM55_RS09240 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site DM55_RS09240 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS09240 IPR005856 Cysteine synthase K/M DM55_RS09240 IPR005858 Cysteine synthase B DM55_RS09245 IPR011757 Lytic transglycosylase MltB DM55_RS09245 IPR023346 Lysozyme-like domain DM55_RS09245 IPR031304 DM55_RS09245 DM55_RS09250 IPR000286 Histone deacetylase superfamily DM55_RS09250 IPR023801 Histone deacetylase domain DM55_RS09255 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS09255 IPR022742 Putative lysophospholipase DM55_RS09255 IPR029058 Alpha/Beta hydrolase fold DM55_RS09260 IPR003439 ABC transporter-like DM55_RS09260 IPR003593 AAA+ ATPase domain DM55_RS09260 IPR017871 ABC transporter, conserved site DM55_RS09260 IPR018449 NIL domain DM55_RS09260 IPR026253 Methionine import ATP-binding protein MetN DM55_RS09260 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09265 IPR000515 MetI-like domain DM55_RS09270 IPR004872 Lipoprotein NlpA family DM55_RS09275 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site DM55_RS09275 IPR012255 Electron transfer flavoprotein, beta subunit DM55_RS09275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS09275 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DM55_RS09280 IPR001308 Electron transfer flavoprotein, alpha subunit DM55_RS09280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS09280 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal DM55_RS09280 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal DM55_RS09280 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site DM55_RS09280 IPR029035 DHS-like NAD/FAD-binding domain DM55_RS09290 IPR006076 FAD dependent oxidoreductase DM55_RS09290 IPR016040 NAD(P)-binding domain DM55_RS09290 IPR023080 D-amino acid dehydrogenase small subunit, DadA DM55_RS09290 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS09295 IPR000485 AsnC-type HTH domain DM55_RS09295 IPR011008 Dimeric alpha-beta barrel DM55_RS09295 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS09295 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DM55_RS09295 IPR019887 Transcription regulator AsnC-type, C-terminal DM55_RS09295 IPR019888 Transcription regulator AsnC-type DM55_RS09300 IPR006638 Elongator protein 3/MiaB/NifB DM55_RS09300 IPR007197 Radical SAM DM55_RS09300 IPR013785 Aldolase-type TIM barrel DM55_RS09305 IPR007829 TM2 domain DM55_RS09315 IPR000307 Ribosomal protein S16 DM55_RS09315 IPR023803 Ribosomal protein S16 domain DM55_RS09320 IPR002676 RimM protein DM55_RS09320 IPR009000 Translation protein, beta-barrel domain DM55_RS09320 IPR011033 PRC-barrel-like DM55_RS09320 IPR011961 16S rRNA processing protein RimM DM55_RS09320 IPR027275 PRC-barrel domain DM55_RS09325 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria DM55_RS09325 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain DM55_RS09325 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal DM55_RS09325 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS09325 IPR029028 Alpha/beta knot methyltransferases DM55_RS09330 IPR001857 Ribosomal protein L19 DM55_RS09330 IPR008991 Translation protein SH3-like domain DM55_RS09330 IPR018257 Ribosomal protein L19, conserved site DM55_RS09335 IPR016181 Acyl-CoA N-acyltransferase DM55_RS09340 IPR000086 NUDIX hydrolase domain DM55_RS09340 IPR015797 NUDIX hydrolase domain-like DM55_RS09345 IPR004485 Cobalamin biosynthesis CobD/CbiB DM55_RS09355 IPR004881 Ribosome biogenesis GTPase RsgA, putative DM55_RS09355 IPR010914 EngC GTPase DM55_RS09355 IPR012340 Nucleic acid-binding, OB-fold DM55_RS09355 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09360 IPR001915 Peptidase M48 DM55_RS09360 IPR027057 CAAX prenyl protease 1 DM55_RS09360 IPR032456 DM55_RS09360 DM55_RS09365 IPR012337 Ribonuclease H-like domain DM55_RS09365 IPR013520 Exonuclease, RNase T/DNA polymerase III DM55_RS09365 IPR022894 Oligoribonuclease DM55_RS09370 IPR001453 Molybdopterin binding domain DM55_RS09370 IPR008284 Molybdenum cofactor biosynthesis, conserved site DM55_RS09375 IPR006839 Ribosome-associated, YjgA DM55_RS09375 IPR023153 PSPTO4464-like domain DM55_RS09380 IPR002510 TldD/PmbA DM55_RS09390 IPR001796 Dihydrofolate reductase domain DM55_RS09390 IPR012259 Dihydrofolate reductase DM55_RS09390 IPR017925 Dihydrofolate reductase conserved site DM55_RS09390 IPR024072 Dihydrofolate reductase-like domain DM55_RS09395 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS09395 IPR002197 DNA binding HTH domain, Fis-type DM55_RS09395 IPR003593 AAA+ ATPase domain DM55_RS09395 IPR009057 Homeodomain-like DM55_RS09395 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS09395 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS09395 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09420 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS09420 IPR002197 DNA binding HTH domain, Fis-type DM55_RS09420 IPR003593 AAA+ ATPase domain DM55_RS09420 IPR009057 Homeodomain-like DM55_RS09420 IPR011006 CheY-like superfamily DM55_RS09420 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS09420 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS09420 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09425 IPR000398 Thymidylate synthase DM55_RS09425 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain DM55_RS09430 IPR008490 Transposase InsH, N-terminal DM55_RS09430 IPR025668 Transposase DDE domain DM55_RS09440 IPR001845 HTH ArsR-type DNA-binding domain DM55_RS09440 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS09450 IPR006683 Thioesterase superfamily DM55_RS09450 IPR029069 HotDog domain DM55_RS09455 IPR000362 Fumarate lyase family DM55_RS09455 IPR005677 Fumarate hydratase, class II DM55_RS09455 IPR008948 L-Aspartase-like DM55_RS09455 IPR018951 Fumarase C, C-terminal DM55_RS09455 IPR020557 Fumarate lyase, conserved site DM55_RS09455 IPR022761 Fumarate lyase, N-terminal DM55_RS09455 IPR024083 Fumarase/histidase, N-terminal DM55_RS09465 IPR001584 Integrase, catalytic core DM55_RS09465 IPR012337 Ribonuclease H-like domain DM55_RS09465 IPR025948 HTH-like domain DM55_RS09470 IPR002514 Transposase IS3/IS911family DM55_RS09470 IPR009057 Homeodomain-like DM55_RS09475 IPR002528 Multi antimicrobial extrusion protein DM55_RS09480 IPR002942 RNA-binding S4 domain DM55_RS09490 IPR025146 Protein of unknown function DUF4088 DM55_RS09495 IPR010292 Uncharacterised protein family CreA DM55_RS09510 IPR000813 7Fe ferredoxin DM55_RS09510 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS09510 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS09510 IPR022569 Ferredoxin, C-terminal DM55_RS09515 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal DM55_RS09515 IPR006406 Nicotinate phosphoribosyltransferase DM55_RS09515 IPR007229 Nicotinate phosphoribosyltransferase family DM55_RS09520 IPR003741 Domain of unknown function DUF162 DM55_RS09520 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain DM55_RS09525 IPR031566 DM55_RS09525 DM55_RS09530 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM55_RS09530 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DM55_RS09530 IPR016040 NAD(P)-binding domain DM55_RS09530 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DM55_RS09535 IPR003798 DNA recombination RmuC DM55_RS09540 IPR000182 GNAT domain DM55_RS09540 IPR016181 Acyl-CoA N-acyltransferase DM55_RS09550 IPR001453 Molybdopterin binding domain DM55_RS09550 IPR005110 MoeA, N-terminal and linker domain DM55_RS09550 IPR005111 MoeA, C-terminal, domain IV DM55_RS09555 IPR013482 Molybdenum cofactor guanylyltransferase DM55_RS09555 IPR025877 MobA-like NTP transferase domain DM55_RS09555 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS09560 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site DM55_RS09560 IPR006638 Elongator protein 3/MiaB/NifB DM55_RS09560 IPR007197 Radical SAM DM55_RS09560 IPR010505 Molybdenum cofactor synthesis C-terminal DM55_RS09560 IPR013483 Molybdenum cofactor biosynthesis protein A DM55_RS09560 IPR013785 Aldolase-type TIM barrel DM55_RS09565 IPR003029 Ribosomal protein S1, RNA-binding domain DM55_RS09565 IPR004659 Ribonuclease E/G DM55_RS09565 IPR012340 Nucleic acid-binding, OB-fold DM55_RS09565 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DM55_RS09565 IPR022967 RNA-binding domain, S1 DM55_RS09565 IPR028878 Ribonuclease E DM55_RS09570 IPR002942 RNA-binding S4 domain DM55_RS09570 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F DM55_RS09570 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DM55_RS09570 IPR006225 Pseudouridine synthase, RluC/RluD DM55_RS09570 IPR020103 Pseudouridine synthase, catalytic domain DM55_RS09575 IPR023214 HAD-like domain DM55_RS09580 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DM55_RS09585 IPR002142 Peptidase S49 DM55_RS09585 IPR029045 ClpP/crotonase-like domain DM55_RS09590 IPR000878 Tetrapyrrole methylase DM55_RS09590 IPR008189 rRNA small subunit methyltransferase I DM55_RS09590 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS09595 IPR003697 Maf-like protein DM55_RS09595 IPR029001 Inosine triphosphate pyrophosphatase-like DM55_RS09600 IPR003772 Protein of unknown function DUF177 DM55_RS09605 IPR002677 Ribosomal protein L32p DM55_RS09605 IPR011332 Zinc-binding ribosomal protein DM55_RS09610 IPR003664 Fatty acid synthesis PlsX protein DM55_RS09610 IPR012281 Phospholipid biosynthesis protein, PlsX-like DM55_RS09610 IPR024084 Isopropylmalate dehydrogenase-like domain DM55_RS09615 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 DM55_RS09615 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal DM55_RS09615 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM55_RS09615 IPR016039 Thiolase-like DM55_RS09620 IPR001227 Acyl transferase domain DM55_RS09620 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type DM55_RS09620 IPR014043 Acyl transferase DM55_RS09620 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS09620 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DM55_RS09620 IPR020801 Polyketide synthase, acyl transferase domain DM55_RS09620 IPR024925 Malonyl CoA-acyl carrier protein transacylase DM55_RS09625 IPR002347 Glucose/ribitol dehydrogenase DM55_RS09625 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase DM55_RS09625 IPR016040 NAD(P)-binding domain DM55_RS09625 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS09630 IPR003231 Acyl carrier protein (ACP) DM55_RS09630 IPR006162 Phosphopantetheine attachment site DM55_RS09630 IPR009081 Acyl carrier protein-like DM55_RS09635 IPR014030 Beta-ketoacyl synthase, N-terminal DM55_RS09635 IPR014031 Beta-ketoacyl synthase, C-terminal DM55_RS09635 IPR016039 Thiolase-like DM55_RS09635 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 DM55_RS09635 IPR018201 Beta-ketoacyl synthase, active site DM55_RS09635 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DM55_RS09645 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site DM55_RS09645 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS09645 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS09645 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DM55_RS09645 IPR013324 RNA polymerase sigma factor, region 3/4 DM55_RS09645 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS09645 IPR014284 RNA polymerase sigma-70 like domain DM55_RS09645 IPR014286 RNA polymerase sigma-70 RpoE type DM55_RS09650 IPR005572 Anti sigma-E protein RseA, N-terminal DM55_RS09655 IPR005588 MucB/RseB DM55_RS09655 IPR033434 DM55_RS09655 DM55_RS09655 IPR033436 DM55_RS09655 DM55_RS09660 IPR001478 PDZ domain DM55_RS09660 IPR001940 Peptidase S1C DM55_RS09660 IPR009003 Trypsin-like cysteine/serine peptidase domain DM55_RS09660 IPR011782 Peptidase S1C, Do DM55_RS09665 IPR008554 Glutaredoxin-like DM55_RS09665 IPR012336 Thioredoxin-like fold DM55_RS09670 IPR000640 Translation elongation factor EFG, V domain DM55_RS09670 IPR000795 Elongation factor, GTP-binding domain DM55_RS09670 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 DM55_RS09670 IPR005225 Small GTP-binding protein domain DM55_RS09670 IPR006297 Elongation factor 4 DM55_RS09670 IPR009000 Translation protein, beta-barrel domain DM55_RS09670 IPR009022 Elongation factor G, III-V domain DM55_RS09670 IPR013842 GTP-binding protein LepA, C-terminal DM55_RS09670 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09670 IPR031157 DM55_RS09670 DM55_RS09675 IPR000223 Peptidase S26A, signal peptidase I DM55_RS09675 IPR015927 Peptidase S24/S26A/S26B/S26C DM55_RS09675 IPR019533 Peptidase S26 DM55_RS09675 IPR019756 Peptidase S26A, signal peptidase I, serine active site DM55_RS09675 IPR019757 Peptidase S26A, signal peptidase I, lysine active site DM55_RS09675 IPR019758 Peptidase S26A, signal peptidase I, conserved site DM55_RS09675 IPR019759 Peptidase S24/S26A/S26B DM55_RS09675 IPR028360 Peptidase S24/S26, beta-ribbon domain DM55_RS09680 IPR000999 Ribonuclease III domain DM55_RS09680 IPR011907 Ribonuclease III DM55_RS09680 IPR014720 Double-stranded RNA-binding domain DM55_RS09685 IPR004044 K Homology domain, type 2 DM55_RS09685 IPR005225 Small GTP-binding protein domain DM55_RS09685 IPR005662 GTP-binding protein Era DM55_RS09685 IPR006073 GTP binding domain DM55_RS09685 IPR009019 K homology domain, prokaryotic type DM55_RS09685 IPR015946 K homology domain-like, alpha/beta DM55_RS09685 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09690 IPR003717 Recombination protein O, RecO DM55_RS09690 IPR012340 Nucleic acid-binding, OB-fold DM55_RS09690 IPR022572 DNA replication/recombination mediator RecO, N-terminal DM55_RS09695 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ DM55_RS09695 IPR013785 Aldolase-type TIM barrel DM55_RS09700 IPR002582 Holo-[acyl carrier protein] synthase DM55_RS09700 IPR004568 Phosphopantethiene-protein transferase domain DM55_RS09700 IPR008278 4'-phosphopantetheinyl transferase superfamily DM55_RS09705 IPR001764 Glycoside hydrolase, family 3, N-terminal DM55_RS09705 IPR017853 Glycoside hydrolase, superfamily DM55_RS09705 IPR022956 Beta-hexosaminidase, bacterial DM55_RS09710 IPR001789 Signal transduction response regulator, receiver domain DM55_RS09710 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS09710 IPR002197 DNA binding HTH domain, Fis-type DM55_RS09710 IPR003593 AAA+ ATPase domain DM55_RS09710 IPR009057 Homeodomain-like DM55_RS09710 IPR011006 CheY-like superfamily DM55_RS09710 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09715 IPR001059 Translation elongation factor P/YeiP, central DM55_RS09715 IPR008991 Translation protein SH3-like domain DM55_RS09715 IPR011768 Translation elongation factor P DM55_RS09715 IPR012340 Nucleic acid-binding, OB-fold DM55_RS09715 IPR013185 Translation elongation factor, KOW-like DM55_RS09715 IPR013852 Translation elongation factor P/YeiP, conserved site DM55_RS09715 IPR014722 Ribosomal protein L2 domain 2 DM55_RS09715 IPR015365 Elongation factor P, C-terminal DM55_RS09715 IPR020599 Translation elongation factor P/YeiP DM55_RS09720 IPR016633 Uncharacterised conserved protein UCP015557 DM55_RS09725 IPR000305 GIY-YIG nuclease superfamily DM55_RS09725 IPR001162 UvrC family homology region DM55_RS09725 IPR001943 UVR domain DM55_RS09725 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 DM55_RS09725 IPR004791 UvrABC system, subunit C DM55_RS09725 IPR010994 RuvA domain 2-like DM55_RS09725 IPR027299 GIY-YIG domain DM55_RS09730 IPR000462 CDP-alcohol phosphatidyltransferase DM55_RS09730 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase DM55_RS09755 IPR000614 Free Met sulfoxide reductase conserved site DM55_RS09755 IPR003018 GAF domain DM55_RS09755 IPR029016 GAF domain-like DM55_RS09760 IPR000847 Transcription regulator HTH, LysR DM55_RS09760 IPR005119 LysR, substrate-binding DM55_RS09760 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS09765 IPR003829 Pirin, N-terminal domain DM55_RS09765 IPR008778 Pirin, C-terminal domain DM55_RS09765 IPR011051 RmlC-like cupin domain DM55_RS09765 IPR012093 Pirin DM55_RS09765 IPR014710 RmlC-like jelly roll fold DM55_RS09770 IPR000182 GNAT domain DM55_RS09770 IPR016181 Acyl-CoA N-acyltransferase DM55_RS09775 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related DM55_RS09780 IPR007410 DR1885-like metal-binding protein DM55_RS09785 IPR003782 Copper chaperone SCO1/SenC DM55_RS09785 IPR012336 Thioredoxin-like fold DM55_RS09790 IPR003337 Trehalose-phosphatase DM55_RS09790 IPR006379 HAD-superfamily hydrolase, subfamily IIB DM55_RS09790 IPR023214 HAD-like domain DM55_RS09795 IPR001830 Glycosyl transferase, family 20 DM55_RS09795 IPR012766 Alpha,alpha-trehalose-phosphate synthase DM55_RS09800 IPR003439 ABC transporter-like DM55_RS09800 IPR003593 AAA+ ATPase domain DM55_RS09800 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS09800 IPR017871 ABC transporter, conserved site DM55_RS09800 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09805 IPR001296 Glycosyl transferase, family 1 DM55_RS09805 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain DM55_RS09815 IPR018706 Protein of unknown function DUF2214, membrane DM55_RS09820 IPR006076 FAD dependent oxidoreductase DM55_RS09820 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS09825 IPR000709 Leu/Ile/Val-binding protein DM55_RS09825 IPR028081 Leucine-binding protein domain DM55_RS09825 IPR028082 Periplasmic binding protein-like I DM55_RS09845 IPR001584 Integrase, catalytic core DM55_RS09845 IPR012337 Ribonuclease H-like domain DM55_RS09850 IPR000515 MetI-like domain DM55_RS09850 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family DM55_RS09855 IPR003439 ABC transporter-like DM55_RS09855 IPR003593 AAA+ ATPase domain DM55_RS09855 IPR017871 ABC transporter, conserved site DM55_RS09855 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09855 IPR030679 DM55_RS09855 DM55_RS09860 IPR009057 Homeodomain-like DM55_RS09860 IPR018060 DNA binding HTH domain, AraC-type DM55_RS09860 IPR018062 HTH domain AraC-type, conserved site DM55_RS09860 IPR020449 Transcription regulator HTH, AraC- type DM55_RS09860 IPR029062 Class I glutamine amidotransferase-like DM55_RS09865 IPR004636 Acetylornithine/Succinylornithine transaminase family DM55_RS09865 IPR005814 Aminotransferase class-III DM55_RS09865 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS09865 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS09865 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS09865 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria DM55_RS09870 IPR007041 Arginine N-succinyltransferase Ast/AOST DM55_RS09870 IPR016181 Acyl-CoA N-acyltransferase DM55_RS09870 IPR017651 Arginine/ornithine succinyltransferase, alpha subunit DM55_RS09875 IPR007041 Arginine N-succinyltransferase Ast/AOST DM55_RS09875 IPR016181 Acyl-CoA N-acyltransferase DM55_RS09875 IPR017650 Arginine N-succinyltransferase AstA DM55_RS09880 IPR015590 Aldehyde dehydrogenase domain DM55_RS09880 IPR016160 Aldehyde dehydrogenase, cysteine active site DM55_RS09880 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS09880 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS09880 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS09880 IPR017649 Succinylglutamic semialdehyde dehydrogenase DM55_RS09880 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS09885 IPR007079 Succinylarginine dihydrolase DM55_RS09890 IPR007036 Succinylglutamate desuccinylase/aspartoacylase DM55_RS09890 IPR016681 Succinylglutamate desuccinylase DM55_RS09895 IPR004046 Glutathione S-transferase, C-terminal DM55_RS09895 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS09900 IPR001638 Extracellular solute-binding protein, family 3 DM55_RS09900 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein DM55_RS09900 IPR018313 Extracellular solute-binding protein, family 3, conserved site DM55_RS09905 IPR005804 Fatty acid desaturase, type 1 DM55_RS09910 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes DM55_RS09910 IPR014210 Cytochrome o ubiquinol oxidase subunit IV DM55_RS09915 IPR000298 Cytochrome c oxidase subunit III domain DM55_RS09915 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle DM55_RS09915 IPR024791 Cytochrome c oxidase subunit III DM55_RS09920 IPR000883 Cytochrome c oxidase subunit I DM55_RS09920 IPR023616 Cytochrome c oxidase, subunit I domain DM55_RS09925 IPR002429 Cytochrome c oxidase subunit II C-terminal DM55_RS09925 IPR006333 Cytochrome o ubiquinol oxidase subunit II DM55_RS09925 IPR008972 Cupredoxin DM55_RS09925 IPR010514 COX aromatic rich motif DM55_RS09925 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain DM55_RS09930 IPR012312 Haemerythrin/HHE cation-binding motif DM55_RS09930 IPR012827 Haemerythrin-like, metal-binding domain DM55_RS09930 IPR016131 Haemerythrin, iron-binding site DM55_RS09935 IPR000944 Transcription regulator Rrf2-like DM55_RS09935 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS09940 IPR018720 Domain of unknown function DUF2249 DM55_RS09945 IPR002744 Domain of unknown function DUF59 DM55_RS09945 IPR017776 FeS assembly SUF system protein SufT, putative DM55_RS09950 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal DM55_RS09955 IPR000192 Aminotransferase class V domain DM55_RS09955 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS09955 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS09955 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS09955 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site DM55_RS09960 IPR000825 SUF system FeS cluster assembly, SufBD DM55_RS09960 IPR011542 SUF system FeS cluster assembly, SufD DM55_RS09965 IPR003439 ABC transporter-like DM55_RS09965 IPR003593 AAA+ ATPase domain DM55_RS09965 IPR017871 ABC transporter, conserved site DM55_RS09965 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS09975 IPR010266 NnrS DM55_RS09980 IPR003660 HAMP linker domain DM55_RS09980 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS09985 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN DM55_RS09985 IPR006638 Elongator protein 3/MiaB/NifB DM55_RS09985 IPR007197 Radical SAM DM55_RS09985 IPR010723 HemN, C-terminal domain DM55_RS09985 IPR023404 Radical SAM, alpha/beta horseshoe DM55_RS09990 IPR000595 Cyclic nucleotide-binding domain DM55_RS09990 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS09990 IPR012318 Helix-turn-helix motif, Crp-type DM55_RS09990 IPR014710 RmlC-like jelly roll fold DM55_RS09990 IPR018490 Cyclic nucleotide-binding-like DM55_RS10000 IPR004136 2-nitropropane dioxygenase, NPD DM55_RS10000 IPR013785 Aldolase-type TIM barrel DM55_RS10005 IPR001539 Peptidase U32 DM55_RS10005 IPR011060 Ribulose-phosphate binding barrel DM55_RS10005 IPR013785 Aldolase-type TIM barrel DM55_RS10010 IPR001539 Peptidase U32 DM55_RS10015 IPR003033 SCP2 sterol-binding domain DM55_RS10020 IPR014958 DGC DM55_RS10025 IPR007197 Radical SAM DM55_RS10025 IPR012840 Ribonucleoside-triphosphate reductase, anaerobic-like DM55_RS10025 IPR013785 Aldolase-type TIM barrel DM55_RS10030 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic DM55_RS10035 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic DM55_RS10040 IPR010266 NnrS DM55_RS10050 IPR002744 Domain of unknown function DUF59 DM55_RS10055 IPR000883 Cytochrome c oxidase subunit I DM55_RS10055 IPR023616 Cytochrome c oxidase, subunit I domain DM55_RS10065 IPR005804 Fatty acid desaturase, type 1 DM55_RS10070 IPR002081 Cryptochrome/DNA photolyase, class 1 DM55_RS10070 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal DM55_RS10070 IPR006050 DNA photolyase, N-terminal DM55_RS10070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10070 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal DM55_RS10075 IPR002891 Adenylylsulphate kinase DM55_RS10075 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10080 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS10080 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain DM55_RS10080 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10080 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS10090 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 DM55_RS10090 IPR022742 Putative lysophospholipase DM55_RS10090 IPR029058 Alpha/Beta hydrolase fold DM55_RS10095 IPR008278 4'-phosphopantetheinyl transferase superfamily DM55_RS10100 IPR001106 Aromatic amino acid lyase DM55_RS10100 IPR005921 Histidine ammonia-lyase DM55_RS10100 IPR008948 L-Aspartase-like DM55_RS10100 IPR022313 Phenylalanine/histidine ammonia-lyases, active site DM55_RS10100 IPR024083 Fumarase/histidase, N-terminal DM55_RS10105 IPR000524 Transcription regulator HTH, GntR DM55_RS10105 IPR010248 Histidine utilization repressor DM55_RS10105 IPR011663 UbiC transcription regulator-associated DM55_RS10105 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10105 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DM55_RS10110 IPR023636 Urocanase conserved site DM55_RS10110 IPR023637 Urocanase DM55_RS10115 IPR010282 Uncharacterised protein family HutD/Ves DM55_RS10115 IPR011051 RmlC-like cupin domain DM55_RS10115 IPR014710 RmlC-like jelly roll fold DM55_RS10120 IPR005920 Imidazolonepropionase DM55_RS10120 IPR006680 Amidohydrolase 1 DM55_RS10120 IPR011059 Metal-dependent hydrolase, composite domain DM55_RS10120 IPR032466 DM55_RS10120 DM55_RS10125 IPR006680 Amidohydrolase 1 DM55_RS10125 IPR010252 Formiminoglutamate deiminase DM55_RS10125 IPR011059 Metal-dependent hydrolase, composite domain DM55_RS10125 IPR032466 DM55_RS10125 DM55_RS10130 IPR002508 Cell wall hydrolase/autolysin, catalytic DM55_RS10130 IPR007709 N-formylglutamate amidohydrolase DM55_RS10130 IPR010247 N-formylglutamate deformylase DM55_RS10150 IPR011697 Peptidase C26 DM55_RS10150 IPR029062 Class I glutamine amidotransferase-like DM55_RS10155 IPR008146 Glutamine synthetase, catalytic domain DM55_RS10155 IPR008147 Glutamine synthetase, beta-Grasp DM55_RS10155 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DM55_RS10155 IPR027303 Glutamine synthetase, glycine-rich site DM55_RS10160 IPR005814 Aminotransferase class-III DM55_RS10160 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS10160 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS10160 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS10165 IPR002514 Transposase IS3/IS911family DM55_RS10165 IPR009057 Homeodomain-like DM55_RS10170 IPR001584 Integrase, catalytic core DM55_RS10170 IPR012337 Ribonuclease H-like domain DM55_RS10170 IPR025948 HTH-like domain DM55_RS10185 IPR000847 Transcription regulator HTH, LysR DM55_RS10185 IPR005119 LysR, substrate-binding DM55_RS10185 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10190 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DM55_RS10190 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site DM55_RS10190 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DM55_RS10195 IPR008318 Uncharacterised conserved protein UCP030820 DM55_RS10200 IPR002500 Phosphoadenosine phosphosulphate reductase DM55_RS10200 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase DM55_RS10200 IPR011798 Adenosine 5'-phosphosulphate reductase DM55_RS10200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10205 IPR002500 Phosphoadenosine phosphosulphate reductase DM55_RS10205 IPR011784 Sulphate adenylyltransferase, small subunit DM55_RS10205 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10210 IPR000795 Elongation factor, GTP-binding domain DM55_RS10210 IPR009000 Translation protein, beta-barrel domain DM55_RS10210 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DM55_RS10210 IPR011779 Sulphate adenylyltransferase, large subunit DM55_RS10210 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10210 IPR031157 DM55_RS10210 DM55_RS10215 IPR000878 Tetrapyrrole methylase DM55_RS10215 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DM55_RS10215 IPR006366 Uroporphyrin-III C-methyltransferase DM55_RS10215 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS10215 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS10220 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX DM55_RS10225 IPR005495 Permease YjgP/YjgQ, predicted DM55_RS10225 IPR030923 DM55_RS10225 DM55_RS10230 IPR005495 Permease YjgP/YjgQ, predicted DM55_RS10230 IPR030922 DM55_RS10230 DM55_RS10235 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal DM55_RS10235 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal DM55_RS10235 IPR011356 Leucine aminopeptidase/peptidase B DM55_RS10235 IPR023042 Peptidase M17, leucine aminopeptidase DM55_RS10240 IPR007459 DNA polymerase III chi subunit, HolC DM55_RS10245 IPR018924 Protein of unknown function DUF2486 DM55_RS10250 IPR002324 Cytochrome c, class ID DM55_RS10250 IPR009056 Cytochrome c-like domain DM55_RS10255 IPR008490 Transposase InsH, N-terminal DM55_RS10255 IPR025668 Transposase DDE domain DM55_RS10260 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase DM55_RS10260 IPR004404 Dihydroxy-acid dehydratase DM55_RS10260 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel DM55_RS10260 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site DM55_RS10265 IPR000847 Transcription regulator HTH, LysR DM55_RS10265 IPR005119 LysR, substrate-binding DM55_RS10265 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10270 IPR001640 Prolipoprotein diacylglyceryl transferase DM55_RS10275 IPR007497 Protein of unknown function DUF541 DM55_RS10280 IPR002740 EVE domain DM55_RS10280 IPR015947 PUA-like domain DM55_RS10285 IPR007838 Cell division protein ZapA-like DM55_RS10285 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain DM55_RS10295 IPR000531 TonB-dependent receptor, beta-barrel DM55_RS10295 IPR012910 TonB-dependent receptor, plug DM55_RS10300 IPR000522 ABC transporter, permease protein DM55_RS10300 IPR029022 ABC transporter, BtuC-like DM55_RS10305 IPR003439 ABC transporter-like DM55_RS10305 IPR003593 AAA+ ATPase domain DM55_RS10305 IPR017871 ABC transporter, conserved site DM55_RS10305 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10310 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like DM55_RS10310 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic DM55_RS10310 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal DM55_RS10315 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase DM55_RS10320 IPR013078 Histidine phosphatase superfamily, clade-1 DM55_RS10320 IPR017578 Alpha-ribazole phosphatase, CobC DM55_RS10320 IPR029033 Histidine phosphatase superfamily DM55_RS10330 IPR002491 ABC transporter periplasmic binding domain DM55_RS10335 IPR004839 Aminotransferase, class I/classII DM55_RS10335 IPR005860 L-threonine-O-3-phosphate decarboxylase DM55_RS10335 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS10335 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS10340 IPR004485 Cobalamin biosynthesis CobD/CbiB DM55_RS10345 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase DM55_RS10345 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10350 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DM55_RS10350 IPR004459 Cobyric acid synthase CobQ DM55_RS10350 IPR011698 CobB/CobQ-like glutamine amidotransferase DM55_RS10350 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10350 IPR029062 Class I glutamine amidotransferase-like DM55_RS10355 IPR032808 DM55_RS10355 DM55_RS10360 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DM55_RS10360 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10365 IPR003190 Aspartate decarboxylase DM55_RS10365 IPR009010 Aspartate decarboxylase-like domain DM55_RS10370 IPR003721 Pantoate-beta-alanine ligase DM55_RS10370 IPR004821 Cytidyltransferase-like domain DM55_RS10370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10375 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA DM55_RS10380 IPR021853 Protein of unknown function DUF3460 DM55_RS10385 IPR000184 Bacterial surface antigen (D15) DM55_RS10390 IPR007452 Protein of unknown function DUF490 DM55_RS10400 IPR001077 O-methyltransferase, family 2 DM55_RS10400 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS10405 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS10405 IPR002547 tRNA-binding domain DM55_RS10405 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal DM55_RS10405 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding DM55_RS10405 IPR012340 Nucleic acid-binding, OB-fold DM55_RS10405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10405 IPR014758 Methionyl-tRNA synthetase DM55_RS10405 IPR015413 Methionyl/Leucyl tRNA synthetase DM55_RS10405 IPR023458 Methionine-tRNA ligase, type 1 DM55_RS10405 IPR029038 Methionyl-tRNA synthetase, Zn-domain DM55_RS10410 IPR006664 Outer membrane protein, bacterial DM55_RS10410 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal DM55_RS10410 IPR027367 YMGG-like Gly-zipper DM55_RS10415 IPR000808 Mrp, conserved site DM55_RS10415 IPR002744 Domain of unknown function DUF59 DM55_RS10415 IPR019591 Mrp/NBP35 ATP-binding protein DM55_RS10415 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10420 IPR001424 Superoxide dismutase, copper/zinc binding domain DM55_RS10420 IPR024134 DM55_RS10420 DM55_RS10425 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase DM55_RS10425 IPR011962 Deoxycytidine triphosphate deaminase DM55_RS10425 IPR029054 dUTPase-like DM55_RS10430 IPR000310 Orn/Lys/Arg decarboxylase, major domain DM55_RS10430 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal DM55_RS10430 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal DM55_RS10430 IPR011193 Ornithine/lysine/arginine decarboxylase DM55_RS10430 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS10430 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS10430 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS10435 IPR009739 Protein of unknown function DUF1311 DM55_RS10440 IPR006439 HAD hydrolase, subfamily IA DM55_RS10440 IPR023214 HAD-like domain DM55_RS10445 IPR000362 Fumarate lyase family DM55_RS10445 IPR008948 L-Aspartase-like DM55_RS10445 IPR009049 Argininosuccinate lyase DM55_RS10445 IPR020557 Fumarate lyase, conserved site DM55_RS10445 IPR022761 Fumarate lyase, N-terminal DM55_RS10445 IPR024083 Fumarase/histidase, N-terminal DM55_RS10445 IPR029419 Argininosuccinate lyase, C-terminal DM55_RS10450 IPR000015 Outer membrane usher protein DM55_RS10450 IPR025949 PapC-like, C-terminal domain DM55_RS10455 IPR008962 PapD-like DM55_RS10455 IPR016147 PapD, N-terminal, bacterial DM55_RS10460 IPR007893 Spore coat protein U DM55_RS10465 IPR001584 Integrase, catalytic core DM55_RS10465 IPR012337 Ribonuclease H-like domain DM55_RS10465 IPR025948 HTH-like domain DM55_RS10470 IPR002514 Transposase IS3/IS911family DM55_RS10470 IPR009057 Homeodomain-like DM55_RS10480 IPR001046 NRAMP family DM55_RS10495 IPR001801 Histone-like protein H-NS DM55_RS10495 IPR027444 Histone-like protein H-NS, C-terminal domain DM55_RS10500 IPR006680 Amidohydrolase 1 DM55_RS10500 IPR032466 DM55_RS10500 DM55_RS10505 IPR005829 Sugar transporter, conserved site DM55_RS10505 IPR011701 Major facilitator superfamily DM55_RS10505 IPR020846 Major facilitator superfamily domain DM55_RS10510 IPR000847 Transcription regulator HTH, LysR DM55_RS10510 IPR005119 LysR, substrate-binding DM55_RS10510 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10515 IPR007893 Spore coat protein U DM55_RS10520 IPR007893 Spore coat protein U DM55_RS10525 IPR007893 Spore coat protein U DM55_RS10525 IPR008966 Adhesion domain DM55_RS10530 IPR008962 PapD-like DM55_RS10530 IPR016147 PapD, N-terminal, bacterial DM55_RS10535 IPR000015 Outer membrane usher protein DM55_RS10540 IPR007893 Spore coat protein U DM55_RS10545 IPR001789 Signal transduction response regulator, receiver domain DM55_RS10545 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS10545 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS10545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS10545 IPR011006 CheY-like superfamily DM55_RS10550 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS10550 IPR001789 Signal transduction response regulator, receiver domain DM55_RS10550 IPR011006 CheY-like superfamily DM55_RS10550 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10550 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS10560 IPR003423 Outer membrane efflux protein DM55_RS10565 IPR004638 Drug resistance transporter EmrB/QacA subfamily DM55_RS10565 IPR011701 Major facilitator superfamily DM55_RS10565 IPR020846 Major facilitator superfamily domain DM55_RS10570 IPR032317 DM55_RS10570 DM55_RS10575 IPR010758 Trans-2-enoyl-CoA reductase DM55_RS10575 IPR024906 Enoyl reductase FAD binding domain DM55_RS10575 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative DM55_RS10580 IPR007312 Phosphoesterase DM55_RS10580 IPR017768 Acid phosphatase, AcpA DM55_RS10580 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha DM55_RS10580 IPR017850 Alkaline-phosphatase-like, core domain DM55_RS10585 IPR004852 Di-haem cytochrome c peroxidase DM55_RS10585 IPR009056 Cytochrome c-like domain DM55_RS10590 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain DM55_RS10595 IPR001764 Glycoside hydrolase, family 3, N-terminal DM55_RS10595 IPR017853 Glycoside hydrolase, superfamily DM55_RS10600 IPR032635 DM55_RS10600 DM55_RS10605 IPR000086 NUDIX hydrolase domain DM55_RS10605 IPR015797 NUDIX hydrolase domain-like DM55_RS10605 IPR020084 NUDIX hydrolase, conserved site DM55_RS10605 IPR020476 NUDIX hydrolase DM55_RS10610 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DM55_RS10610 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS10610 IPR004514 Glutamine-tRNA synthetase DM55_RS10610 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain DM55_RS10610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10610 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain DM55_RS10610 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DM55_RS10610 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain DM55_RS10610 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain DM55_RS10610 IPR022861 Glutamine-tRNA ligase, bacterial DM55_RS10620 IPR003673 CoA-transferase family III DM55_RS10620 IPR023606 CoA-transferase family III domain DM55_RS10630 IPR002318 Alanine-tRNA ligase, class IIc DM55_RS10630 IPR003156 DHHA1 domain DM55_RS10630 IPR009000 Translation protein, beta-barrel domain DM55_RS10630 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DM55_RS10630 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain DM55_RS10630 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain DM55_RS10630 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal DM55_RS10630 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria DM55_RS10635 IPR000847 Transcription regulator HTH, LysR DM55_RS10635 IPR005119 LysR, substrate-binding DM55_RS10635 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10640 IPR010645 Domain of unknown function DUF1228 DM55_RS10640 IPR020846 Major facilitator superfamily domain DM55_RS10645 IPR002514 Transposase IS3/IS911family DM55_RS10645 IPR009057 Homeodomain-like DM55_RS10650 IPR001584 Integrase, catalytic core DM55_RS10650 IPR012337 Ribonuclease H-like domain DM55_RS10650 IPR025948 HTH-like domain DM55_RS10655 IPR010645 Domain of unknown function DUF1228 DM55_RS10655 IPR020846 Major facilitator superfamily domain DM55_RS10660 IPR001478 PDZ domain DM55_RS10660 IPR001940 Peptidase S1C DM55_RS10660 IPR009003 Trypsin-like cysteine/serine peptidase domain DM55_RS10670 IPR000086 NUDIX hydrolase domain DM55_RS10670 IPR015797 NUDIX hydrolase domain-like DM55_RS10675 IPR002765 Uncharacterised protein family UPF0145 DM55_RS10680 IPR001670 Alcohol dehydrogenase, iron-type DM55_RS10680 IPR018211 Alcohol dehydrogenase, iron-type, conserved site DM55_RS10685 IPR006683 Thioesterase superfamily DM55_RS10685 IPR029069 HotDog domain DM55_RS10690 IPR001851 ABC transporter, permease DM55_RS10695 IPR001851 ABC transporter, permease DM55_RS10695 IPR003439 ABC transporter-like DM55_RS10695 IPR003593 AAA+ ATPase domain DM55_RS10695 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10695 IPR032823 DM55_RS10695 DM55_RS10700 IPR003439 ABC transporter-like DM55_RS10700 IPR003593 AAA+ ATPase domain DM55_RS10700 IPR017871 ABC transporter, conserved site DM55_RS10700 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10705 IPR011051 RmlC-like cupin domain DM55_RS10705 IPR014710 RmlC-like jelly roll fold DM55_RS10705 IPR021120 KduI/IolB isomerase DM55_RS10705 IPR024203 5-deoxy-glucuronate isomerase, IolB DM55_RS10710 IPR013022 Xylose isomerase-like, TIM barrel domain DM55_RS10710 IPR030823 DM55_RS10710 DM55_RS10715 IPR000399 TPP-binding enzyme, conserved site DM55_RS10715 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DM55_RS10715 IPR012000 Thiamine pyrophosphate enzyme, central domain DM55_RS10715 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DM55_RS10715 IPR029035 DHS-like NAD/FAD-binding domain DM55_RS10715 IPR029061 Thiamin diphosphate-binding fold DM55_RS10715 IPR030817 DM55_RS10715 DM55_RS10720 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DM55_RS10720 IPR011611 Carbohydrate kinase PfkB DM55_RS10720 IPR018659 Protein of unknown function DUF2090 DM55_RS10720 IPR029056 Ribokinase-like DM55_RS10720 IPR030830 DM55_RS10720 DM55_RS10725 IPR003439 ABC transporter-like DM55_RS10725 IPR003593 AAA+ ATPase domain DM55_RS10725 IPR017871 ABC transporter, conserved site DM55_RS10725 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10730 IPR001851 ABC transporter, permease DM55_RS10735 IPR025997 Periplasmic binding protein domain DM55_RS10735 IPR028082 Periplasmic binding protein-like I DM55_RS10740 IPR000281 Helix-turn-helix protein RpiR DM55_RS10740 IPR001347 Sugar isomerase (SIS) DM55_RS10740 IPR009057 Homeodomain-like DM55_RS10740 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10745 IPR000683 Oxidoreductase, N-terminal DM55_RS10745 IPR004104 Oxidoreductase, C-terminal DM55_RS10745 IPR016040 NAD(P)-binding domain DM55_RS10745 IPR030827 DM55_RS10745 DM55_RS10750 IPR000683 Oxidoreductase, N-terminal DM55_RS10750 IPR004104 Oxidoreductase, C-terminal DM55_RS10750 IPR016040 NAD(P)-binding domain DM55_RS10755 IPR001455 TusA-like domain DM55_RS10765 IPR001789 Signal transduction response regulator, receiver domain DM55_RS10765 IPR001867 Signal transduction response regulator, C-terminal DM55_RS10765 IPR011006 CheY-like superfamily DM55_RS10765 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10765 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS10770 IPR006860 FecR protein DM55_RS10770 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 DM55_RS10770 IPR018392 LysM domain DM55_RS10775 IPR000014 PAS domain DM55_RS10775 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS10775 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS10775 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS10775 IPR007890 CHASE2 DM55_RS10775 IPR017181 Signal transduction histidine kinase, CHASE2/PAS sensor domain-containing, predicted DM55_RS10780 IPR025411 Domain of unknown function DUF4136 DM55_RS10785 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type DM55_RS10785 IPR005835 Nucleotidyl transferase DM55_RS10785 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS10790 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site DM55_RS10790 IPR002300 Aminoacyl-tRNA synthetase, class Ia DM55_RS10790 IPR002303 Valine-tRNA ligase DM55_RS10790 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain DM55_RS10790 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding DM55_RS10790 IPR010978 tRNA-binding arm DM55_RS10790 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding DM55_RS10790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS10790 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm DM55_RS10795 IPR000212 DNA helicase, UvrD/REP type DM55_RS10795 IPR013986 DExx box DNA helicase domain DM55_RS10795 IPR014016 UvrD-like Helicase, ATP-binding domain DM55_RS10795 IPR014017 DNA helicase, UvrD-like, C-terminal DM55_RS10795 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS10800 IPR000845 Nucleoside phosphorylase domain DM55_RS10800 IPR010049 MTA/SAH nucleosidase DM55_RS10800 IPR018017 Nucleoside phosphorylase DM55_RS10805 IPR011701 Major facilitator superfamily DM55_RS10805 IPR020846 Major facilitator superfamily domain DM55_RS10810 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS10810 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS10810 IPR024478 4HB MCP domain DM55_RS10820 IPR006143 RND efflux pump, membrane fusion protein DM55_RS10820 IPR032317 DM55_RS10820 DM55_RS10825 IPR012451 Protein of unknown function DUF1656 DM55_RS10830 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein DM55_RS10835 IPR003423 Outer membrane efflux protein DM55_RS10835 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DM55_RS10840 IPR000847 Transcription regulator HTH, LysR DM55_RS10840 IPR005119 LysR, substrate-binding DM55_RS10840 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10850 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type DM55_RS10850 IPR029052 Metallo-dependent phosphatase-like DM55_RS10855 IPR004113 FAD-linked oxidase, C-terminal DM55_RS10855 IPR006094 FAD linked oxidase, N-terminal DM55_RS10855 IPR016164 FAD-linked oxidase-like, C-terminal DM55_RS10855 IPR016166 FAD-binding, type 2 DM55_RS10855 IPR016167 FAD-binding, type 2, subdomain 1 DM55_RS10855 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 DM55_RS10855 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DM55_RS10860 IPR018643 Protein of unknown function DUF2069, membrane DM55_RS10865 IPR005025 NADPH-dependent FMN reductase-like DM55_RS10865 IPR010089 Flavoprotein WrbA DM55_RS10865 IPR029039 Flavoprotein-like DM55_RS10870 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10870 IPR017039 Virulence factor BrkB DM55_RS10870 IPR023679 Uncharacterised protein family UPF0761, bacterial DM55_RS10875 IPR009305 Protein of unknown function DUF962 DM55_RS10880 IPR000644 CBS domain DM55_RS10885 IPR002123 Phospholipid/glycerol acyltransferase DM55_RS10885 IPR011701 Major facilitator superfamily DM55_RS10885 IPR020846 Major facilitator superfamily domain DM55_RS10895 IPR000453 Chorismate synthase DM55_RS10895 IPR020541 Chorismate synthase, conserved site DM55_RS10905 IPR009057 Homeodomain-like DM55_RS10905 IPR010921 Trp repressor/replication initiator DM55_RS10905 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS10910 IPR025948 HTH-like domain DM55_RS10915 IPR001584 Integrase, catalytic core DM55_RS10915 IPR012337 Ribonuclease H-like domain DM55_RS10915 IPR025948 HTH-like domain DM55_RS10920 IPR002514 Transposase IS3/IS911family DM55_RS10920 IPR009057 Homeodomain-like DM55_RS10925 IPR007893 Spore coat protein U DM55_RS10930 IPR001387 Cro/C1-type helix-turn-helix domain DM55_RS10930 IPR010982 Lambda repressor-like, DNA-binding domain DM55_RS10935 IPR013216 Methyltransferase type 11 DM55_RS10935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS10940 IPR008490 Transposase InsH, N-terminal DM55_RS10940 IPR025668 Transposase DDE domain DM55_RS10945 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain DM55_RS10945 IPR018129 Phosphoenolpyruvate carboxylase, active site DM55_RS10945 IPR021135 Phosphoenolpyruvate carboxylase DM55_RS10945 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type DM55_RS10945 IPR033129 DM55_RS10945 DM55_RS10955 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase DM55_RS10955 IPR022417 Porphobilinogen deaminase, N-terminal DM55_RS10955 IPR022418 Porphobilinogen deaminase, C-terminal DM55_RS10955 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site DM55_RS10960 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase DM55_RS10960 IPR007470 HemX DM55_RS10965 IPR005254 Heme biosynthesis-associated TPR protein DM55_RS10965 IPR010817 HemY, N-terminal DM55_RS10965 IPR011990 Tetratricopeptide-like helical domain DM55_RS10965 IPR019734 Tetratricopeptide repeat DM55_RS10970 IPR011701 Major facilitator superfamily DM55_RS10970 IPR020846 Major facilitator superfamily domain DM55_RS10975 IPR002347 Glucose/ribitol dehydrogenase DM55_RS10975 IPR016040 NAD(P)-binding domain DM55_RS10980 IPR015590 Aldehyde dehydrogenase domain DM55_RS10980 IPR016160 Aldehyde dehydrogenase, cysteine active site DM55_RS10980 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS10980 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS10980 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS10980 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS10985 IPR008162 Inorganic pyrophosphatase DM55_RS10990 IPR000305 GIY-YIG nuclease superfamily DM55_RS11000 IPR007434 Protein of unknown function DUF482 DM55_RS11000 IPR016181 Acyl-CoA N-acyltransferase DM55_RS11005 IPR003010 Carbon-nitrogen hydrolase DM55_RS11005 IPR003694 NAD(+) synthetase DM55_RS11005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS11005 IPR022310 NAD/GMP synthase DM55_RS11010 IPR002187 Nitrogen regulatory protein PII DM55_RS11010 IPR002332 Nitrogen regulatory protein P-II, urydylation site DM55_RS11010 IPR011322 Nitrogen regulatory PII-like, alpha/beta DM55_RS11010 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DM55_RS11010 IPR017918 Nitrogen regulatory protein PII, conserved site DM55_RS11015 IPR002299 Porin, Neisseria sp. type DM55_RS11015 IPR023614 Porin domain DM55_RS11020 IPR003439 ABC transporter-like DM55_RS11020 IPR003593 AAA+ ATPase domain DM55_RS11020 IPR017871 ABC transporter, conserved site DM55_RS11020 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11020 IPR030679 DM55_RS11020 DM55_RS11025 IPR000515 MetI-like domain DM55_RS11025 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family DM55_RS11030 IPR000515 MetI-like domain DM55_RS11030 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family DM55_RS11030 IPR030199 DM55_RS11030 DM55_RS11035 IPR001638 Extracellular solute-binding protein, family 3 DM55_RS11035 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein DM55_RS11035 IPR018313 Extracellular solute-binding protein, family 3, conserved site DM55_RS11050 IPR025961 Heavy-metal resistance protein DM55_RS11055 IPR001789 Signal transduction response regulator, receiver domain DM55_RS11055 IPR001867 Signal transduction response regulator, C-terminal DM55_RS11055 IPR011006 CheY-like superfamily DM55_RS11055 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS11055 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS11060 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS11060 IPR003660 HAMP linker domain DM55_RS11060 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS11060 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS11070 IPR000515 MetI-like domain DM55_RS11075 IPR003439 ABC transporter-like DM55_RS11075 IPR003593 AAA+ ATPase domain DM55_RS11075 IPR017871 ABC transporter, conserved site DM55_RS11075 IPR018632 C-terminal AAA-associated domain DM55_RS11075 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11080 IPR001584 Integrase, catalytic core DM55_RS11080 IPR012337 Ribonuclease H-like domain DM55_RS11080 IPR025948 HTH-like domain DM55_RS11085 IPR002514 Transposase IS3/IS911family DM55_RS11085 IPR009057 Homeodomain-like DM55_RS11095 IPR008490 Transposase InsH, N-terminal DM55_RS11095 IPR025668 Transposase DDE domain DM55_RS11105 IPR000847 Transcription regulator HTH, LysR DM55_RS11105 IPR005119 LysR, substrate-binding DM55_RS11105 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS11110 IPR006089 Acyl-CoA dehydrogenase, conserved site DM55_RS11110 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS11110 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS11110 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS11115 IPR003673 CoA-transferase family III DM55_RS11115 IPR023606 CoA-transferase family III domain DM55_RS11120 IPR005828 General substrate transporter DM55_RS11120 IPR020846 Major facilitator superfamily domain DM55_RS11125 IPR007457 Fe(II) trafficking protein YggX DM55_RS11130 IPR000182 GNAT domain DM55_RS11130 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS11130 IPR010167 Amino-acid N-acetyltransferase (ArgA) DM55_RS11130 IPR016181 Acyl-CoA N-acyltransferase DM55_RS11135 IPR001650 Helicase, C-terminal DM55_RS11135 IPR003593 AAA+ ATPase domain DM55_RS11135 IPR007502 Helicase-associated domain DM55_RS11135 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type DM55_RS11135 IPR011709 Domain of unknown function DUF1605 DM55_RS11135 IPR014001 Helicase, superfamily 1/2, ATP-binding domain DM55_RS11135 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal DM55_RS11135 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11140 IPR011045 Nitrous oxide reductase, N-terminal DM55_RS11140 IPR015943 WD40/YVTN repeat-like-containing domain DM55_RS11140 IPR019405 Lactonase, 7-bladed beta propeller DM55_RS11145 IPR006694 Fatty acid hydroxylase DM55_RS11155 IPR001453 Molybdopterin binding domain DM55_RS11160 IPR001763 Rhodanese-like domain DM55_RS11165 IPR001637 Glutamine synthetase class-I, adenylation site DM55_RS11165 IPR004809 Glutamine synthetase type I DM55_RS11165 IPR008146 Glutamine synthetase, catalytic domain DM55_RS11165 IPR008147 Glutamine synthetase, beta-Grasp DM55_RS11165 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain DM55_RS11165 IPR027302 Glutamine synthetase, N-terminal conserved site DM55_RS11165 IPR027303 Glutamine synthetase, glycine-rich site DM55_RS11170 IPR000014 PAS domain DM55_RS11170 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS11170 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS11170 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS11175 IPR001789 Signal transduction response regulator, receiver domain DM55_RS11175 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS11175 IPR002197 DNA binding HTH domain, Fis-type DM55_RS11175 IPR003593 AAA+ ATPase domain DM55_RS11175 IPR009057 Homeodomain-like DM55_RS11175 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) DM55_RS11175 IPR011006 CheY-like superfamily DM55_RS11175 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DM55_RS11175 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS11175 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS11175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11180 IPR008490 Transposase InsH, N-terminal DM55_RS11180 IPR025668 Transposase DDE domain DM55_RS11185 IPR004808 AP endonuclease 1 DM55_RS11185 IPR005135 Endonuclease/exonuclease/phosphatase DM55_RS11185 IPR020848 AP endonuclease 1, conserved site DM55_RS11190 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS11190 IPR001789 Signal transduction response regulator, receiver domain DM55_RS11190 IPR011006 CheY-like superfamily DM55_RS11190 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS11190 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS11195 IPR003018 GAF domain DM55_RS11195 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS11195 IPR003660 HAMP linker domain DM55_RS11195 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain DM55_RS11195 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing DM55_RS11195 IPR029016 GAF domain-like DM55_RS11195 IPR029095 NarX-like, N-terminal DM55_RS11200 IPR003816 Nitrate reductase, gamma subunit DM55_RS11200 IPR023234 NarG-like domain DM55_RS11205 IPR003765 Nitrate reductase chaperone, NarJ DM55_RS11205 IPR020945 DMSO/Nitrate reductase chaperone DM55_RS11210 IPR006547 Nitrate reductase, beta subunit DM55_RS11210 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS11210 IPR029263 Respiratory nitrate reductase beta, C-terminal DM55_RS11215 IPR006468 Nitrate reductase, alpha subunit DM55_RS11215 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site DM55_RS11215 IPR006656 Molybdopterin oxidoreductase DM55_RS11215 IPR006657 Molydopterin dinucleotide-binding domain DM55_RS11215 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DM55_RS11215 IPR009010 Aspartate decarboxylase-like domain DM55_RS11215 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site DM55_RS11215 IPR028189 Nitrate reductase, alpha subunit, N-terminal DM55_RS11220 IPR004737 Nitrate transporter DM55_RS11220 IPR011701 Major facilitator superfamily DM55_RS11220 IPR020846 Major facilitator superfamily domain DM55_RS11225 IPR011701 Major facilitator superfamily DM55_RS11225 IPR020846 Major facilitator superfamily domain DM55_RS11235 IPR001126 DNA-repair protein, UmuC-like DM55_RS11235 IPR017961 DNA polymerase, Y-family, little finger domain DM55_RS11235 IPR022880 DNA polymerase IV DM55_RS11235 IPR024728 DNA polymerase type-Y, HhH motif DM55_RS11240 IPR001567 Peptidase M3A/M3B DM55_RS11240 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 DM55_RS11240 IPR024079 Metallopeptidase, catalytic domain DM55_RS11240 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal DM55_RS11245 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase DM55_RS11245 IPR016040 NAD(P)-binding domain DM55_RS11245 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DM55_RS11245 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DM55_RS11245 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site DM55_RS11250 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS11250 IPR001789 Signal transduction response regulator, receiver domain DM55_RS11250 IPR011006 CheY-like superfamily DM55_RS11250 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS11250 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS11255 IPR000014 PAS domain DM55_RS11255 IPR001610 PAC motif DM55_RS11255 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS11255 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS11255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS11255 IPR013767 PAS fold DM55_RS11260 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type DM55_RS11260 IPR005474 Transketolase, N-terminal DM55_RS11260 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II DM55_RS11260 IPR029061 Thiamin diphosphate-binding fold DM55_RS11260 IPR033247 DM55_RS11260 DM55_RS11265 IPR000089 Biotin/lipoyl attachment DM55_RS11265 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DM55_RS11265 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DM55_RS11265 IPR004167 E3 binding DM55_RS11265 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex DM55_RS11265 IPR011053 Single hybrid motif DM55_RS11265 IPR023213 Chloramphenicol acetyltransferase-like domain DM55_RS11270 IPR000089 Biotin/lipoyl attachment DM55_RS11270 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DM55_RS11270 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM55_RS11270 IPR006258 Dihydrolipoamide dehydrogenase DM55_RS11270 IPR011053 Single hybrid motif DM55_RS11270 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DM55_RS11270 IPR016156 FAD/NAD-linked reductase, dimerisation domain DM55_RS11270 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS11280 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal DM55_RS11280 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS11280 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A DM55_RS11285 IPR010127 Phasin, subfamily 1 DM55_RS11285 IPR018968 Phasin DM55_RS11300 IPR002514 Transposase IS3/IS911family DM55_RS11300 IPR009057 Homeodomain-like DM55_RS11305 IPR001584 Integrase, catalytic core DM55_RS11305 IPR012337 Ribonuclease H-like domain DM55_RS11305 IPR025948 HTH-like domain DM55_RS11320 IPR004368 Translation initiation factor IF-1 DM55_RS11320 IPR006196 RNA-binding domain, S1, IF1 type DM55_RS11320 IPR012340 Nucleic acid-binding, OB-fold DM55_RS11320 IPR022967 RNA-binding domain, S1 DM55_RS11330 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS11330 IPR000639 Epoxide hydrolase-like DM55_RS11330 IPR029058 Alpha/Beta hydrolase fold DM55_RS11335 IPR018750 Protein of unknown function DUF2306, membrane DM55_RS11340 IPR004039 Rubredoxin-type fold DM55_RS11340 IPR018527 Rubredoxin, iron-binding site DM55_RS11340 IPR024935 Rubredoxin domain DM55_RS11345 IPR025512 Domain of unknown function DUF4399 DM55_RS11350 IPR003439 ABC transporter-like DM55_RS11350 IPR003593 AAA+ ATPase domain DM55_RS11350 IPR017871 ABC transporter, conserved site DM55_RS11350 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11350 IPR032524 DM55_RS11350 DM55_RS11350 IPR032781 DM55_RS11350 DM55_RS11355 IPR001241 DNA topoisomerase, type IIA DM55_RS11355 IPR002288 DNA gyrase B subunit, C-terminal DM55_RS11355 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS11355 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative DM55_RS11355 IPR006171 Toprim domain DM55_RS11355 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 DM55_RS11355 IPR013759 DNA topoisomerase, type IIA, central domain DM55_RS11355 IPR013760 DNA topoisomerase, type IIA-like domain DM55_RS11355 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS11355 IPR018522 DNA topoisomerase, type IIA, conserved site DM55_RS11355 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS11360 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal DM55_RS11360 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative DM55_RS11360 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta DM55_RS11360 IPR013760 DNA topoisomerase, type IIA-like domain DM55_RS11360 IPR024946 Arginine repressor C-terminal-like domain DM55_RS11370 IPR008457 Copper resistance D DM55_RS11375 IPR000847 Transcription regulator HTH, LysR DM55_RS11375 IPR005119 LysR, substrate-binding DM55_RS11375 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS11380 IPR007896 Transmembrane pair, bacterial DM55_RS11385 IPR000847 Transcription regulator HTH, LysR DM55_RS11385 IPR005119 LysR, substrate-binding DM55_RS11385 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS11390 IPR005828 General substrate transporter DM55_RS11390 IPR020846 Major facilitator superfamily domain DM55_RS11395 IPR002933 Peptidase M20 DM55_RS11395 IPR010158 Amidase, hydantoinase/carbamoylase DM55_RS11395 IPR011650 Peptidase M20, dimerisation domain DM55_RS11400 IPR000286 Histone deacetylase superfamily DM55_RS11400 IPR023801 Histone deacetylase domain DM55_RS11405 IPR003370 Chromate transporter DM55_RS11405 IPR014047 Chromate transporter, long chain DM55_RS11410 IPR000160 GGDEF domain DM55_RS11410 IPR001633 EAL domain DM55_RS11410 IPR029787 Nucleotide cyclase DM55_RS11410 IPR033479 DM55_RS11410 DM55_RS11415 IPR003719 Phenazine biosynthesis PhzF protein DM55_RS11420 IPR006175 YjgF/Yer057p/UK114 family DM55_RS11420 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like DM55_RS11425 IPR001584 Integrase, catalytic core DM55_RS11425 IPR012337 Ribonuclease H-like domain DM55_RS11425 IPR025948 HTH-like domain DM55_RS11430 IPR000715 Glycosyl transferase, family 4 DM55_RS11435 IPR005886 UDP-glucose 4-epimerase GalE DM55_RS11435 IPR016040 NAD(P)-binding domain DM55_RS11440 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain DM55_RS11445 IPR001173 Glycosyltransferase 2-like DM55_RS11445 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS11450 IPR002797 Polysaccharide biosynthesis protein DM55_RS11455 IPR005841 Alpha-D-phosphohexomutase superfamily DM55_RS11455 IPR005843 Alpha-D-phosphohexomutase, C-terminal DM55_RS11455 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DM55_RS11455 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DM55_RS11455 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DM55_RS11455 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DM55_RS11460 IPR002201 Glycosyl transferase, family 9 DM55_RS11460 IPR011908 Lipopolysaccharide heptosyltransferase I DM55_RS11465 IPR021266 Kdo hydroxylase DM55_RS11470 IPR001296 Glycosyl transferase, family 1 DM55_RS11470 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal DM55_RS11475 IPR003495 CobW/HypB/UreG domain DM55_RS11475 IPR004400 Urease accessory protein UreG DM55_RS11475 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11480 IPR002639 Urease accessory protein UreF DM55_RS11485 IPR004029 UreE urease accessory, N-terminal DM55_RS11485 IPR007864 Urease accessory protein UreE, C-terminal domain DM55_RS11485 IPR012406 Urease accessory protein UreE DM55_RS11490 IPR005848 Urease, alpha subunit DM55_RS11490 IPR006680 Amidohydrolase 1 DM55_RS11490 IPR011059 Metal-dependent hydrolase, composite domain DM55_RS11490 IPR011612 Urease alpha-subunit, N-terminal domain DM55_RS11490 IPR017950 Urease active site DM55_RS11490 IPR029754 Urease nickel binding site DM55_RS11490 IPR032466 DM55_RS11490 DM55_RS11495 IPR002019 Urease, beta subunit DM55_RS11500 IPR002026 Urease, gamma/gamma-beta subunit DM55_RS11500 IPR012010 Urease, gamma subunit DM55_RS11505 IPR002669 Urease accessory protein UreD DM55_RS11510 IPR003439 ABC transporter-like DM55_RS11510 IPR003593 AAA+ ATPase domain DM55_RS11510 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE DM55_RS11510 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11515 IPR003439 ABC transporter-like DM55_RS11515 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD DM55_RS11515 IPR017871 ABC transporter, conserved site DM55_RS11515 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11515 IPR032823 DM55_RS11515 DM55_RS11520 IPR001851 ABC transporter, permease DM55_RS11520 IPR017778 ABC transporter, urea, permease protein, UrtC DM55_RS11525 IPR001851 ABC transporter, permease DM55_RS11525 IPR017779 ABC transporter, urea, permease protein, UrtB DM55_RS11530 IPR017777 ABC transporter, urea, substrate-binding, UrtA DM55_RS11530 IPR028082 Periplasmic binding protein-like I DM55_RS11535 IPR005814 Aminotransferase class-III DM55_RS11535 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS11535 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS11535 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS11540 IPR001763 Rhodanese-like domain DM55_RS11545 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase DM55_RS11545 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal DM55_RS11545 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS11555 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN DM55_RS11555 IPR006638 Elongator protein 3/MiaB/NifB DM55_RS11555 IPR007197 Radical SAM DM55_RS11555 IPR010723 HemN, C-terminal domain DM55_RS11555 IPR023404 Radical SAM, alpha/beta horseshoe DM55_RS11565 IPR010835 Protein of unknown function DUF1439 DM55_RS11570 IPR003824 Undecaprenyl-diphosphatase UppP DM55_RS11575 IPR003358 tRNA (guanine-N-7) methyltransferase DM55_RS11575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS11590 IPR013216 Methyltransferase type 11 DM55_RS11590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS11595 IPR000209 Peptidase S8/S53 domain DM55_RS11600 IPR003691 Putative fluoride ion transporter CrcB DM55_RS11605 IPR003793 Domain of unknown function DUF190 DM55_RS11605 IPR011322 Nitrogen regulatory PII-like, alpha/beta DM55_RS11605 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DM55_RS11610 IPR003425 Uncharacterised protein family Ycf19 DM55_RS11615 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS11615 IPR016040 NAD(P)-binding domain DM55_RS11615 IPR018931 Domain of unknown function DUF2520 DM55_RS11615 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain DM55_RS11615 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DM55_RS11625 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS11630 IPR001123 Lysine-type exporter protein (LYSE/YGGA) DM55_RS11635 IPR002830 UbiD decarboxylyase family DM55_RS11635 IPR012349 FMN-binding split barrel DM55_RS11635 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DM55_RS11640 IPR008258 Lytic transglycosylase-like SLT domain DM55_RS11640 IPR023346 Lysozyme-like domain DM55_RS11645 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DM55_RS11645 IPR004839 Aminotransferase, class I/classII DM55_RS11645 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS11645 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS11645 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS11650 IPR006027 NusB/RsmB/TIM44 DM55_RS11650 IPR011605 NusB antitermination factor DM55_RS11655 IPR002180 6,7-dimethyl-8-ribityllumazine synthase DM55_RS11660 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB DM55_RS11660 IPR017945 DHBP synthase RibB-like alpha/beta domain DM55_RS11660 IPR032677 DM55_RS11660 DM55_RS11665 IPR001783 Lumazine-binding protein DM55_RS11665 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS11665 IPR023366 ATP synthase subunit alpha-like domain DM55_RS11665 IPR026017 Lumazine-binding domain DM55_RS11670 IPR002125 CMP/dCMP deaminase, zinc-binding DM55_RS11670 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal DM55_RS11670 IPR004794 Riboflavin biosynthesis protein RibD DM55_RS11670 IPR011549 Riboflavin-specific deaminase, C-terminal DM55_RS11670 IPR016192 APOBEC/CMP deaminase, zinc-binding DM55_RS11670 IPR016193 Cytidine deaminase-like DM55_RS11670 IPR024072 Dihydrofolate reductase-like domain DM55_RS11675 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase DM55_RS11675 IPR005814 Aminotransferase class-III DM55_RS11675 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS11675 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS11675 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS11680 IPR015947 PUA-like domain DM55_RS11690 IPR004812 Drug resistance transporter Bcr/CmlA subfamily DM55_RS11690 IPR011701 Major facilitator superfamily DM55_RS11690 IPR020846 Major facilitator superfamily domain DM55_RS11695 IPR021439 Protein of unknown function DUF3088 DM55_RS11700 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme DM55_RS11700 IPR005966 D-cysteine desulfhydrase DM55_RS11700 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase DM55_RS11705 IPR003439 ABC transporter-like DM55_RS11705 IPR003593 AAA+ ATPase domain DM55_RS11705 IPR017871 ABC transporter, conserved site DM55_RS11705 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11705 IPR030206 DM55_RS11705 DM55_RS11705 IPR030679 DM55_RS11705 DM55_RS11710 IPR000515 MetI-like domain DM55_RS11710 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family DM55_RS11715 IPR001638 Extracellular solute-binding protein, family 3 DM55_RS11720 IPR000281 Helix-turn-helix protein RpiR DM55_RS11720 IPR000843 Transcription regulator HTH, LacI DM55_RS11720 IPR001347 Sugar isomerase (SIS) DM55_RS11720 IPR003836 Glucokinase DM55_RS11720 IPR009057 Homeodomain-like DM55_RS11720 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS11725 IPR005900 6-phosphogluconolactonase, DevB-type DM55_RS11725 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase DM55_RS11730 IPR001282 Glucose-6-phosphate dehydrogenase DM55_RS11730 IPR016040 NAD(P)-binding domain DM55_RS11730 IPR019796 Glucose-6-phosphate dehydrogenase, active site DM55_RS11730 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding DM55_RS11730 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal DM55_RS11735 IPR006059 Bacterial extracellular solute-binding, family 1 DM55_RS11740 IPR000515 MetI-like domain DM55_RS11745 IPR000515 MetI-like domain DM55_RS11750 IPR003439 ABC transporter-like DM55_RS11750 IPR003593 AAA+ ATPase domain DM55_RS11750 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS11750 IPR012340 Nucleic acid-binding, OB-fold DM55_RS11750 IPR013611 Transport-associated OB, type 2 DM55_RS11750 IPR017871 ABC transporter, conserved site DM55_RS11750 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11755 IPR005115 Uncharacterised domain UPF0126 DM55_RS11760 IPR002625 Smr protein/MutS2 C-terminal DM55_RS11765 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II DM55_RS11765 IPR005982 Thioredoxin reductase DM55_RS11765 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site DM55_RS11765 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS11770 IPR002543 FtsK domain DM55_RS11770 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS11770 IPR018541 FtsK gamma domain DM55_RS11770 IPR025199 Domain of unknown function DUF4117 DM55_RS11770 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11775 IPR004564 Outer membrane lipoprotein carrier protein LolA-like DM55_RS11775 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria DM55_RS11775 IPR029046 Lipoprotein localisation LolA/LolB/LppX DM55_RS11785 IPR003593 AAA+ ATPase domain DM55_RS11785 IPR003959 ATPase, AAA-type, core DM55_RS11785 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DM55_RS11785 IPR021886 MgsA AAA+ ATPase C-terminal DM55_RS11785 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11785 IPR032423 DM55_RS11785 DM55_RS11790 IPR018680 Protein of unknown function DUF2164 DM55_RS11795 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain DM55_RS11795 IPR002317 Serine-tRNA ligase, type1 DM55_RS11795 IPR010978 tRNA-binding arm DM55_RS11795 IPR015866 Serine-tRNA synthetase, type1, N-terminal DM55_RS11810 IPR016181 Acyl-CoA N-acyltransferase DM55_RS11815 IPR005526 Septum formation inhibitor MinC, C-terminal DM55_RS11815 IPR007874 Septum formation inhibitor MinC, N-terminal DM55_RS11815 IPR013033 Septum formation inhibitor MinC DM55_RS11815 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal DM55_RS11820 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DM55_RS11820 IPR010223 ATP binding protein MinD, bacterial-type DM55_RS11820 IPR025501 ATP binding protein MinD DM55_RS11820 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11825 IPR005527 Septum formation topological specificity factor MinE DM55_RS11830 IPR024447 YXWGXW repeat DM55_RS11840 IPR001807 Chloride channel, voltage gated DM55_RS11840 IPR014743 Chloride channel, core DM55_RS11845 IPR002201 Glycosyl transferase, family 9 DM55_RS11845 IPR011908 Lipopolysaccharide heptosyltransferase I DM55_RS11855 IPR005828 General substrate transporter DM55_RS11855 IPR005829 Sugar transporter, conserved site DM55_RS11855 IPR011701 Major facilitator superfamily DM55_RS11855 IPR020846 Major facilitator superfamily domain DM55_RS11860 IPR006260 TonB, C-terminal DM55_RS11885 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related DM55_RS11885 IPR006638 Elongator protein 3/MiaB/NifB DM55_RS11885 IPR007197 Radical SAM DM55_RS11885 IPR010723 HemN, C-terminal domain DM55_RS11885 IPR023404 Radical SAM, alpha/beta horseshoe DM55_RS11890 IPR002637 Ham1-like protein DM55_RS11890 IPR020922 Non-canonical purine NTP pyrophosphatase DM55_RS11890 IPR029001 Inosine triphosphate pyrophosphatase-like DM55_RS11895 IPR001247 Exoribonuclease, phosphorolytic domain 1 DM55_RS11895 IPR002381 Ribonuclease phosphorolytic, bacterial-type DM55_RS11895 IPR015847 Exoribonuclease, phosphorolytic domain 2 DM55_RS11895 IPR018336 Ribonuclease PH, conserved site DM55_RS11895 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS11895 IPR027408 PNPase/RNase PH domain DM55_RS11900 IPR005229 Conserved hypothetical protein CHP00255 DM55_RS11900 IPR013527 YicC-like, N-terminal DM55_RS11900 IPR013551 Domain of unknown function DUF1732 DM55_RS11905 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DM55_RS11905 IPR017665 Guanylate kinase DM55_RS11905 IPR020590 Guanylate kinase, conserved site DM55_RS11905 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS11910 IPR003716 DNA-directed RNA polymerase, omega subunit DM55_RS11910 IPR006110 RNA polymerase, subunit omega/K/RPB6 DM55_RS11910 IPR012293 RNA polymerase subunit, RPB6/omega DM55_RS11915 IPR002912 ACT domain DM55_RS11915 IPR003607 HD/PDEase domain DM55_RS11915 IPR004095 TGS DM55_RS11915 IPR004811 RelA/SpoT family DM55_RS11915 IPR007685 RelA/SpoT DM55_RS11915 IPR012675 Beta-grasp domain DM55_RS11915 IPR012676 TGS-like DM55_RS11930 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DM55_RS11930 IPR006358 Transcription elongation factor GreB DM55_RS11930 IPR018151 Transcription elongation factor, GreA/GreB, conserved site DM55_RS11930 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal DM55_RS11930 IPR023459 Transcription elongation factor GreA/GreB family DM55_RS11930 IPR028624 Transcription elongation factor GreA/GreB DM55_RS11945 IPR001584 Integrase, catalytic core DM55_RS11945 IPR012337 Ribonuclease H-like domain DM55_RS11945 IPR025948 HTH-like domain DM55_RS11950 IPR002514 Transposase IS3/IS911family DM55_RS11950 IPR009057 Homeodomain-like DM55_RS11960 IPR011990 Tetratricopeptide-like helical domain DM55_RS11960 IPR014162 Tol-Pal system, YbgF DM55_RS11960 IPR032519 DM55_RS11960 DM55_RS11965 IPR006664 Outer membrane protein, bacterial DM55_RS11965 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal DM55_RS11965 IPR006690 Outer membrane protein, OmpA-like, conserved site DM55_RS11965 IPR014169 Peptidoglycan-associated lipoprotein DM55_RS11970 IPR007195 TolB, N-terminal DM55_RS11970 IPR011659 WD40-like Beta Propeller DM55_RS11970 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB DM55_RS11970 IPR015943 WD40/YVTN repeat-like-containing domain DM55_RS11975 IPR006260 TonB, C-terminal DM55_RS11975 IPR014161 Tol-Pal system, TolA DM55_RS11980 IPR003400 Biopolymer transport protein ExbD/TolR DM55_RS11980 IPR014168 Biopolymer transport, TolR DM55_RS11985 IPR002898 MotA/TolQ/ExbB proton channel DM55_RS11985 IPR014163 Tol-Pal system, TolQ DM55_RS11990 IPR006683 Thioesterase superfamily DM55_RS11990 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family DM55_RS11990 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase DM55_RS11990 IPR029069 HotDog domain DM55_RS11995 IPR002347 Glucose/ribitol dehydrogenase DM55_RS11995 IPR016040 NAD(P)-binding domain DM55_RS11995 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS12000 IPR001085 Serine hydroxymethyltransferase DM55_RS12000 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS12000 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS12000 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS12000 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site DM55_RS12005 IPR003796 Ribonucleotide reductase regulator NrdR-like DM55_RS12005 IPR005144 ATP-cone DM55_RS12010 IPR022346 General secretion pathway, GspH DM55_RS12020 IPR032092 DM55_RS12020 DM55_RS12030 IPR012902 Prokaryotic N-terminal methylation site DM55_RS12035 IPR021751 Protein of unknown function DUF3318 DM55_RS12040 IPR009937 Protein of unknown function DUF1469 DM55_RS12045 IPR010279 Protein of unknown function DUF883, ElaB DM55_RS12050 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant DM55_RS12050 IPR012336 Thioredoxin-like fold DM55_RS12050 IPR019479 Peroxiredoxin, C-terminal DM55_RS12050 IPR024706 Peroxiredoxin, AhpC-type DM55_RS12060 IPR006089 Acyl-CoA dehydrogenase, conserved site DM55_RS12060 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS12060 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS12060 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS12060 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS12065 IPR005471 Transcription regulator IclR, N-terminal DM55_RS12065 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS12065 IPR014757 Transcription regulator IclR, C-terminal DM55_RS12065 IPR029016 GAF domain-like DM55_RS12070 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V DM55_RS12070 IPR011057 Mss4-like DM55_RS12075 IPR001633 EAL domain DM55_RS12080 IPR001279 Beta-lactamase-like DM55_RS12085 IPR002938 Monooxygenase, FAD-binding DM55_RS12085 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS12090 IPR021233 Protein of unknown function DUF2783 DM55_RS12095 IPR005829 Sugar transporter, conserved site DM55_RS12095 IPR011701 Major facilitator superfamily DM55_RS12095 IPR020846 Major facilitator superfamily domain DM55_RS12100 IPR005708 Homogentisate 1,2-dioxygenase DM55_RS12100 IPR011051 RmlC-like cupin domain DM55_RS12100 IPR014710 RmlC-like jelly roll fold DM55_RS12100 IPR022950 Homogentisate 1,2-dioxygenase, bacterial DM55_RS12105 IPR005959 Fumarylacetoacetase DM55_RS12105 IPR011234 Fumarylacetoacetase, C-terminal-related DM55_RS12105 IPR015377 Fumarylacetoacetase, N-terminal DM55_RS12110 IPR011701 Major facilitator superfamily DM55_RS12110 IPR020846 Major facilitator superfamily domain DM55_RS12115 IPR011701 Major facilitator superfamily DM55_RS12115 IPR020846 Major facilitator superfamily domain DM55_RS12120 IPR000415 Nitroreductase-like DM55_RS12120 IPR012825 5,6-dimethylbenzimidazole synthase BluB DM55_RS12120 IPR029479 Nitroreductase DM55_RS12125 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DM55_RS12125 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DM55_RS12125 IPR016040 NAD(P)-binding domain DM55_RS12125 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DM55_RS12130 IPR000847 Transcription regulator HTH, LysR DM55_RS12130 IPR005119 LysR, substrate-binding DM55_RS12130 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS12135 IPR000192 Aminotransferase class V domain DM55_RS12135 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS12135 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS12135 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS12135 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site DM55_RS12135 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase DM55_RS12140 IPR009057 Homeodomain-like DM55_RS12140 IPR018060 DNA binding HTH domain, AraC-type DM55_RS12140 IPR018062 HTH domain AraC-type, conserved site DM55_RS12145 IPR000620 Drug/metabolite transporter DM55_RS12150 IPR011701 Major facilitator superfamily DM55_RS12150 IPR020846 Major facilitator superfamily domain DM55_RS12150 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily DM55_RS12155 IPR001041 2Fe-2S ferredoxin-type domain DM55_RS12155 IPR002346 Molybdopterin dehydrogenase, FAD-binding DM55_RS12155 IPR002888 [2Fe-2S]-binding DM55_RS12155 IPR005107 CO dehydrogenase flavoprotein, C-terminal DM55_RS12155 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DM55_RS12155 IPR012175 Xanthine dehydrogenase, small subunit, bacteria DM55_RS12155 IPR012675 Beta-grasp domain DM55_RS12155 IPR014307 Xanthine dehydrogenase, small subunit DM55_RS12155 IPR016166 FAD-binding, type 2 DM55_RS12155 IPR016167 FAD-binding, type 2, subdomain 1 DM55_RS12155 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 DM55_RS12160 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DM55_RS12160 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding DM55_RS12160 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit DM55_RS12170 IPR009959 Polyketide cyclase SnoaL-like domain DM55_RS12170 IPR016918 Uncharacterised conserved protein UCP029394 DM55_RS12170 IPR032710 DM55_RS12170 DM55_RS12175 IPR000531 TonB-dependent receptor, beta-barrel DM55_RS12175 IPR010105 TonB-dependent siderophore receptor DM55_RS12175 IPR012910 TonB-dependent receptor, plug DM55_RS12180 IPR003439 ABC transporter-like DM55_RS12180 IPR003593 AAA+ ATPase domain DM55_RS12180 IPR017871 ABC transporter, conserved site DM55_RS12180 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12185 IPR002491 ABC transporter periplasmic binding domain DM55_RS12195 IPR000522 ABC transporter, permease protein DM55_RS12195 IPR029022 ABC transporter, BtuC-like DM55_RS12200 IPR000847 Transcription regulator HTH, LysR DM55_RS12200 IPR005119 LysR, substrate-binding DM55_RS12200 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS12205 IPR001853 DSBA-like thioredoxin domain DM55_RS12205 IPR012336 Thioredoxin-like fold DM55_RS12205 IPR014440 HCCA isomerase/glutathione S-transferase kappa DM55_RS12210 IPR011852 TRAP transporter solute receptor, TAXI family DM55_RS12215 IPR007055 BON domain DM55_RS12220 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative DM55_RS12220 IPR029058 Alpha/Beta hydrolase fold DM55_RS12225 IPR001563 Peptidase S10, serine carboxypeptidase DM55_RS12225 IPR029058 Alpha/Beta hydrolase fold DM55_RS12230 IPR002781 Transmembrane protein TauE like DM55_RS12235 IPR004638 Drug resistance transporter EmrB/QacA subfamily DM55_RS12235 IPR011701 Major facilitator superfamily DM55_RS12235 IPR020846 Major facilitator superfamily domain DM55_RS12240 IPR004129 Glycerophosphoryl diester phosphodiesterase DM55_RS12240 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain DM55_RS12240 IPR030395 DM55_RS12240 DM55_RS12250 IPR001123 Lysine-type exporter protein (LYSE/YGGA) DM55_RS12255 IPR000182 GNAT domain DM55_RS12255 IPR016181 Acyl-CoA N-acyltransferase DM55_RS12260 IPR001387 Cro/C1-type helix-turn-helix domain DM55_RS12260 IPR010982 Lambda repressor-like, DNA-binding domain DM55_RS12260 IPR011051 RmlC-like cupin domain DM55_RS12260 IPR014710 RmlC-like jelly roll fold DM55_RS12265 IPR001279 Beta-lactamase-like DM55_RS12270 IPR002577 Helix-turn-helix, HxlR type DM55_RS12270 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS12275 IPR021340 Protein of unknown function DUF2957 DM55_RS12280 IPR021340 Protein of unknown function DUF2957 DM55_RS12285 IPR005618 Outer membrane protein, OmpW DM55_RS12285 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel DM55_RS12300 IPR002085 Alcohol dehydrogenase superfamily, zinc-type DM55_RS12300 IPR011032 GroES (chaperonin 10)-like DM55_RS12300 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS12300 IPR013154 Alcohol dehydrogenase GroES-like DM55_RS12300 IPR016040 NAD(P)-binding domain DM55_RS12300 IPR020843 Polyketide synthase, enoylreductase DM55_RS12305 IPR002577 Helix-turn-helix, HxlR type DM55_RS12305 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS12310 IPR011989 Armadillo-like helical DM55_RS12310 IPR016024 Armadillo-type fold DM55_RS12315 IPR011032 GroES (chaperonin 10)-like DM55_RS12315 IPR018369 Chaperonin Cpn10, conserved site DM55_RS12315 IPR020818 Chaperonin Cpn10 DM55_RS12320 IPR001844 Chaperonin Cpn60 DM55_RS12320 IPR002423 Chaperonin Cpn60/TCP-1 DM55_RS12320 IPR018370 Chaperonin Cpn60, conserved site DM55_RS12320 IPR027409 GroEL-like apical domain DM55_RS12320 IPR027413 GroEL-like equatorial domain DM55_RS12325 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase DM55_RS12325 IPR029056 Ribokinase-like DM55_RS12330 IPR004039 Rubredoxin-type fold DM55_RS12330 IPR018527 Rubredoxin, iron-binding site DM55_RS12330 IPR024922 Rubredoxin DM55_RS12330 IPR024935 Rubredoxin domain DM55_RS12340 IPR003774 Protein of unknown function UPF0301 DM55_RS12345 IPR005227 Resolvase, holliday junction-type, YqgF-like DM55_RS12345 IPR006641 YqgF/RNase H-like domain DM55_RS12345 IPR012337 Ribonuclease H-like domain DM55_RS12350 IPR000836 Phosphoribosyltransferase domain DM55_RS12350 IPR029057 Phosphoribosyltransferase-like DM55_RS12355 IPR002082 Aspartate carbamoyltransferase DM55_RS12355 IPR006130 Aspartate/ornithine carbamoyltransferase DM55_RS12355 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DM55_RS12355 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DM55_RS12360 IPR004722 Dihydroorotase DM55_RS12360 IPR006680 Amidohydrolase 1 DM55_RS12360 IPR011059 Metal-dependent hydrolase, composite domain DM55_RS12360 IPR032466 DM55_RS12360 DM55_RS12365 IPR002123 Phospholipid/glycerol acyltransferase DM55_RS12370 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) DM55_RS12370 IPR004843 Calcineurin-like phosphoesterase domain, apaH type DM55_RS12370 IPR029052 Metallo-dependent phosphatase-like DM55_RS12375 IPR005888 dTDP-glucose 4,6-dehydratase DM55_RS12375 IPR016040 NAD(P)-binding domain DM55_RS12380 IPR005835 Nucleotidyl transferase DM55_RS12380 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form DM55_RS12380 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS12385 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related DM55_RS12385 IPR011051 RmlC-like cupin domain DM55_RS12385 IPR014710 RmlC-like jelly roll fold DM55_RS12390 IPR005913 dTDP-4-dehydrorhamnose reductase DM55_RS12390 IPR016040 NAD(P)-binding domain DM55_RS12390 IPR029903 DM55_RS12390 DM55_RS12395 IPR000412 ABC-2 transporter DM55_RS12395 IPR013525 ABC-2 type transporter DM55_RS12400 IPR003439 ABC transporter-like DM55_RS12400 IPR003593 AAA+ ATPase domain DM55_RS12400 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12400 IPR029439 Wzt, C-terminal DM55_RS12405 IPR002656 Acyltransferase 3 DM55_RS12410 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain DM55_RS12410 IPR008089 Nucleotide sugar epimerase DM55_RS12410 IPR016040 NAD(P)-binding domain DM55_RS12415 IPR001173 Glycosyltransferase 2-like DM55_RS12415 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS12420 IPR001173 Glycosyltransferase 2-like DM55_RS12420 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS12420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS12425 IPR001173 Glycosyltransferase 2-like DM55_RS12425 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS12430 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS12435 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain DM55_RS12435 IPR016040 NAD(P)-binding domain DM55_RS12440 IPR000715 Glycosyl transferase, family 4 DM55_RS12445 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain DM55_RS12445 IPR016040 NAD(P)-binding domain DM55_RS12450 IPR001584 Integrase, catalytic core DM55_RS12450 IPR012337 Ribonuclease H-like domain DM55_RS12450 IPR025948 HTH-like domain DM55_RS12460 IPR001851 ABC transporter, permease DM55_RS12465 IPR001851 ABC transporter, permease DM55_RS12470 IPR003439 ABC transporter-like DM55_RS12470 IPR003593 AAA+ ATPase domain DM55_RS12470 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12470 IPR032823 DM55_RS12470 DM55_RS12475 IPR003439 ABC transporter-like DM55_RS12475 IPR003593 AAA+ ATPase domain DM55_RS12475 IPR017871 ABC transporter, conserved site DM55_RS12475 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12475 IPR030660 DM55_RS12475 DM55_RS12480 IPR019268 Protein of unknown function DUF2278 DM55_RS12485 IPR000182 GNAT domain DM55_RS12485 IPR016181 Acyl-CoA N-acyltransferase DM55_RS12490 IPR004636 Acetylornithine/Succinylornithine transaminase family DM55_RS12490 IPR005814 Aminotransferase class-III DM55_RS12490 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS12490 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS12490 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS12495 IPR001041 2Fe-2S ferredoxin-type domain DM55_RS12495 IPR001221 Phenol hydroxylase reductase DM55_RS12495 IPR001433 Oxidoreductase FAD/NAD(P)-binding DM55_RS12495 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase DM55_RS12495 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site DM55_RS12495 IPR008333 Oxidoreductase, FAD-binding domain DM55_RS12495 IPR012675 Beta-grasp domain DM55_RS12495 IPR017938 Riboflavin synthase-like beta-barrel DM55_RS12500 IPR003148 Regulator of K+ conductance, N-terminal DM55_RS12500 IPR016040 NAD(P)-binding domain DM55_RS12510 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DM55_RS12510 IPR002942 RNA-binding S4 domain DM55_RS12510 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F DM55_RS12510 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DM55_RS12510 IPR020103 Pseudouridine synthase, catalytic domain DM55_RS12515 IPR007348 CopC domain DM55_RS12515 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like DM55_RS12515 IPR014756 Immunoglobulin E-set DM55_RS12520 IPR000847 Transcription regulator HTH, LysR DM55_RS12520 IPR005119 LysR, substrate-binding DM55_RS12520 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS12525 IPR000847 Transcription regulator HTH, LysR DM55_RS12525 IPR005119 LysR, substrate-binding DM55_RS12525 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS12530 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS12530 IPR000639 Epoxide hydrolase-like DM55_RS12530 IPR029058 Alpha/Beta hydrolase fold DM55_RS12535 IPR005163 3-alpha domain DM55_RS12535 IPR005302 Molybdenum cofactor sulfurase, C-terminal DM55_RS12535 IPR011037 Pyruvate kinase-like, insert domain DM55_RS12535 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like DM55_RS12540 IPR002220 DapA-like DM55_RS12540 IPR013785 Aldolase-type TIM barrel DM55_RS12545 IPR001303 Class II aldolase/adducin N-terminal DM55_RS12550 IPR001387 Cro/C1-type helix-turn-helix domain DM55_RS12550 IPR010982 Lambda repressor-like, DNA-binding domain DM55_RS12550 IPR011051 RmlC-like cupin domain DM55_RS12550 IPR013096 Cupin 2, conserved barrel DM55_RS12550 IPR014710 RmlC-like jelly roll fold DM55_RS12560 IPR001584 Integrase, catalytic core DM55_RS12560 IPR012337 Ribonuclease H-like domain DM55_RS12560 IPR025948 HTH-like domain DM55_RS12565 IPR002514 Transposase IS3/IS911family DM55_RS12565 IPR009057 Homeodomain-like DM55_RS12570 IPR004839 Aminotransferase, class I/classII DM55_RS12570 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS12570 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS12570 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS12575 IPR000620 Drug/metabolite transporter DM55_RS12580 IPR025870 Glyoxalase-like domain DM55_RS12585 IPR000524 Transcription regulator HTH, GntR DM55_RS12585 IPR004839 Aminotransferase, class I/classII DM55_RS12585 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS12585 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS12585 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS12590 IPR001404 Heat shock protein Hsp90 family DM55_RS12590 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS12590 IPR019805 Heat shock protein Hsp90, conserved site DM55_RS12590 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS12590 IPR020575 Heat shock protein Hsp90, N-terminal DM55_RS12595 IPR007440 Chorismate--pyruvate lyase DM55_RS12595 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain DM55_RS12600 IPR005122 Uracil-DNA glycosylase-like DM55_RS12600 IPR026353 Hypoxanthine-DNA glycosylase DM55_RS12605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS12610 IPR021741 Protein of unknown function DUF3311 DM55_RS12615 IPR001734 Sodium/solute symporter DM55_RS12620 IPR028973 3-demethylubiquinone-9 3-methyltransferase DM55_RS12620 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DM55_RS12630 IPR004711 Benzoate transporter DM55_RS12635 IPR008912 Uncharacterised protein family CoxE-like DM55_RS12640 IPR003593 AAA+ ATPase domain DM55_RS12640 IPR003959 ATPase, AAA-type, core DM55_RS12640 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12645 IPR009056 Cytochrome c-like domain DM55_RS12650 IPR009056 Cytochrome c-like domain DM55_RS12655 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS12655 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS12655 IPR032877 DM55_RS12655 DM55_RS12660 IPR014993 Protein of unknown function DUF1841 DM55_RS12665 IPR000620 Drug/metabolite transporter DM55_RS12670 IPR000445 Helix-hairpin-helix motif DM55_RS12670 IPR003265 HhH-GPD domain DM55_RS12670 IPR004036 Endonuclease III-like, conserved site-2 DM55_RS12670 IPR005759 Endonuclease III DM55_RS12670 IPR011257 DNA glycosylase DM55_RS12670 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DM55_RS12675 IPR007202 4Fe-4S domain DM55_RS12675 IPR010207 Electron transport complex, RnfB DM55_RS12675 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS12680 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS12680 IPR009057 Homeodomain-like DM55_RS12680 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DM55_RS12680 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS12685 IPR009656 PHB de-polymerase, C-terminal DM55_RS12685 IPR010915 Polyhydroxyalkanoate depolymerase DM55_RS12685 IPR029058 Alpha/Beta hydrolase fold DM55_RS12690 IPR008928 Six-hairpin glycosidase-like DM55_RS12690 IPR011613 Glycoside hydrolase family 15 DM55_RS12690 IPR012341 Six-hairpin glycosidase DM55_RS12695 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain DM55_RS12695 IPR015943 WD40/YVTN repeat-like-containing domain DM55_RS12695 IPR019405 Lactonase, 7-bladed beta propeller DM55_RS12705 IPR002543 FtsK domain DM55_RS12705 IPR003593 AAA+ ATPase domain DM55_RS12705 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS12705 IPR018541 FtsK gamma domain DM55_RS12705 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12710 IPR005184 Domain of unknown function DUF306, Meta/HslJ DM55_RS12720 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain DM55_RS12720 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DM55_RS12720 IPR005862 Phosphoribosylglycinamide formyltransferase 2 DM55_RS12720 IPR011054 Rudiment single hybrid motif DM55_RS12720 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS12720 IPR013816 ATP-grasp fold, subdomain 2 DM55_RS12720 IPR016185 Pre-ATP-grasp domain DM55_RS12730 IPR018660 C-type lysozyme, inhibitor DM55_RS12735 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site DM55_RS12735 IPR001650 Helicase, C-terminal DM55_RS12735 IPR011545 DEAD/DEAH box helicase domain DM55_RS12735 IPR014001 Helicase, superfamily 1/2, ATP-binding domain DM55_RS12735 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12740 IPR000924 Glutamyl/glutaminyl-tRNA synthetase DM55_RS12740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS12740 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain DM55_RS12740 IPR022380 Glutamyl-Q tRNA(Asp) synthetase DM55_RS12745 IPR001763 Rhodanese-like domain DM55_RS12745 IPR020936 Uncharacterised protein family UPF0176 DM55_RS12755 IPR003141 Polymerase/histidinol phosphatase, N-terminal DM55_RS12755 IPR004013 PHP, C-terminal DM55_RS12755 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type DM55_RS12755 IPR004805 DNA polymerase III, alpha subunit DM55_RS12755 IPR011708 Bacterial DNA polymerase III, alpha subunit DM55_RS12755 IPR012340 Nucleic acid-binding, OB-fold DM55_RS12755 IPR016195 Polymerase/histidinol phosphatase-like DM55_RS12755 IPR029460 DNA polymerase, helix-hairpin-helix motif DM55_RS12760 IPR003439 ABC transporter-like DM55_RS12760 IPR003593 AAA+ ATPase domain DM55_RS12760 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS12760 IPR011917 ABC transporter, lipid A export, MsbA DM55_RS12760 IPR017871 ABC transporter, conserved site DM55_RS12760 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12765 IPR001296 Glycosyl transferase, family 1 DM55_RS12765 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain DM55_RS12770 IPR002201 Glycosyl transferase, family 9 DM55_RS12775 IPR007016 O-antigen ligase-related DM55_RS12780 IPR001296 Glycosyl transferase, family 1 DM55_RS12785 IPR002201 Glycosyl transferase, family 9 DM55_RS12790 IPR001173 Glycosyltransferase 2-like DM55_RS12790 IPR029044 Nucleotide-diphospho-sugar transferases DM55_RS12795 IPR024572 Protein of unknown function DUF3315 DM55_RS12805 IPR011701 Major facilitator superfamily DM55_RS12805 IPR020846 Major facilitator superfamily domain DM55_RS12810 IPR011033 PRC-barrel-like DM55_RS12815 IPR003779 Carboxymuconolactone decarboxylase-like DM55_RS12815 IPR004675 Alkylhydroperoxidase AhpD core DM55_RS12815 IPR029032 AhpD-like DM55_RS12820 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS12820 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS12820 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DM55_RS12820 IPR013324 RNA polymerase sigma factor, region 3/4 DM55_RS12820 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS12820 IPR014284 RNA polymerase sigma-70 like domain DM55_RS12820 IPR014303 RNA polymerase sigma-70, ECF type DM55_RS12820 IPR032710 DM55_RS12820 DM55_RS12845 IPR017769 Phospholipase C accessory protein PlcR DM55_RS12850 IPR004963 Protein notum homologue DM55_RS12850 IPR029058 Alpha/Beta hydrolase fold DM55_RS12855 IPR006042 Xanthine/uracil permease DM55_RS12855 IPR006043 Xanthine/uracil/vitamin C permease DM55_RS12855 IPR017588 Xanthine permease DM55_RS12860 IPR004659 Ribonuclease E/G DM55_RS12860 IPR012340 Nucleic acid-binding, OB-fold DM55_RS12860 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DM55_RS12860 IPR022967 RNA-binding domain, S1 DM55_RS12865 IPR003697 Maf-like protein DM55_RS12865 IPR029001 Inosine triphosphate pyrophosphatase-like DM55_RS12870 IPR003742 SPOUT methyltransferase, predicted DM55_RS12870 IPR016051 Ribosomal RNA large subunit methyltransferase H DM55_RS12870 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS12870 IPR029028 Alpha/beta knot methyltransferases DM55_RS12875 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DM55_RS12880 IPR004821 Cytidyltransferase-like domain DM55_RS12880 IPR005248 Probable nicotinate-nucleotide adenylyltransferase DM55_RS12880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS12885 IPR001260 Coproporphyrinogen III oxidase, aerobic DM55_RS12885 IPR018375 Coproporphyrinogen III oxidase, conserved site DM55_RS12890 IPR000115 Phosphoribosylglycinamide synthetase DM55_RS12890 IPR011054 Rudiment single hybrid motif DM55_RS12890 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS12890 IPR013816 ATP-grasp fold, subdomain 2 DM55_RS12890 IPR016185 Pre-ATP-grasp domain DM55_RS12890 IPR020560 Phosphoribosylglycinamide synthetase, C-domain DM55_RS12890 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DM55_RS12890 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal DM55_RS12895 IPR002876 Transcriptional regulator TACO1-like DM55_RS12895 IPR017856 Integrase, N-terminal zinc-binding domain-like DM55_RS12895 IPR026563 Transcriptional regulator TACO1-like, domain 2 DM55_RS12895 IPR026564 Transcriptional regulator TACO1-like, domain 3 DM55_RS12895 IPR029072 YebC-like DM55_RS12900 IPR005765 Uracil phosphoribosyl transferase DM55_RS12900 IPR029057 Phosphoribosyltransferase-like DM55_RS12905 IPR002347 Glucose/ribitol dehydrogenase DM55_RS12905 IPR016040 NAD(P)-binding domain DM55_RS12910 IPR004363 Methylglyoxal synthase DM55_RS12910 IPR011607 Methylglyoxal synthase-like domain DM55_RS12910 IPR018148 Methylglyoxal synthase, active site DM55_RS12915 IPR002085 Alcohol dehydrogenase superfamily, zinc-type DM55_RS12915 IPR011032 GroES (chaperonin 10)-like DM55_RS12915 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS12915 IPR013154 Alcohol dehydrogenase GroES-like DM55_RS12915 IPR016040 NAD(P)-binding domain DM55_RS12915 IPR020843 Polyketide synthase, enoylreductase DM55_RS12920 IPR011726 K+ transporting P-type ATPase, F subunit DM55_RS12925 IPR004623 Potassium-transporting ATPase A chain DM55_RS12930 IPR001757 Cation-transporting P-type ATPase DM55_RS12930 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA DM55_RS12930 IPR008250 P-type ATPase, A domain DM55_RS12930 IPR018303 P-type ATPase, phosphorylation site DM55_RS12930 IPR023214 HAD-like domain DM55_RS12930 IPR023299 P-type ATPase, cytoplasmic domain N DM55_RS12935 IPR003820 Potassium-transporting ATPase C chain DM55_RS12945 IPR003018 GAF domain DM55_RS12945 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS12945 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS12945 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal DM55_RS12945 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS12945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS12945 IPR025201 Sensor protein KdpD, transmembrane domain DM55_RS12945 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS12945 IPR029016 GAF domain-like DM55_RS12950 IPR001789 Signal transduction response regulator, receiver domain DM55_RS12950 IPR001867 Signal transduction response regulator, C-terminal DM55_RS12950 IPR011006 CheY-like superfamily DM55_RS12950 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS12950 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS12955 IPR005590 Protein of unknown function DUF333 DM55_RS12960 IPR000390 Small multidrug resistance protein family DM55_RS12965 IPR025196 Domain of unknown function DUF4126 DM55_RS12975 IPR001486 Globin, truncated bacterial-like DM55_RS12975 IPR009050 Globin-like DM55_RS12975 IPR012292 Globin, structural domain DM55_RS12975 IPR019795 Globin, bacterial-like, conserved site DM55_RS12980 IPR009000 Translation protein, beta-barrel domain DM55_RS12980 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DM55_RS12980 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain DM55_RS12980 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal DM55_RS12985 IPR010323 Protein of unknown function DUF924 DM55_RS12985 IPR011990 Tetratricopeptide-like helical domain DM55_RS12990 IPR000120 Amidase DM55_RS12990 IPR023631 Amidase signature domain DM55_RS12995 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS12995 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS12995 IPR032877 DM55_RS12995 DM55_RS13000 IPR005829 Sugar transporter, conserved site DM55_RS13000 IPR011701 Major facilitator superfamily DM55_RS13000 IPR020846 Major facilitator superfamily domain DM55_RS13010 IPR002347 Glucose/ribitol dehydrogenase DM55_RS13010 IPR016040 NAD(P)-binding domain DM55_RS13010 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS13015 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DM55_RS13015 IPR031100 DM55_RS13015 DM55_RS13020 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS13020 IPR009057 Homeodomain-like DM55_RS13020 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS13020 IPR025722 Bacterial transcriptional repressor TetR DM55_RS13025 IPR000829 Diacylglycerol kinase, prokaryotic DM55_RS13030 IPR001296 Glycosyl transferase, family 1 DM55_RS13030 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain DM55_RS13035 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type DM55_RS13035 IPR029052 Metallo-dependent phosphatase-like DM55_RS13040 IPR010432 RDD DM55_RS13045 IPR021455 Protein of unknown function DUF3106 DM55_RS13050 IPR022064 Protein of unknown function DUF3619 DM55_RS13055 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS13055 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DM55_RS13055 IPR013324 RNA polymerase sigma factor, region 3/4 DM55_RS13055 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS13055 IPR014284 RNA polymerase sigma-70 like domain DM55_RS13060 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DM55_RS13060 IPR012000 Thiamine pyrophosphate enzyme, central domain DM55_RS13060 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain DM55_RS13060 IPR012846 Acetolactate synthase, large subunit, biosynthetic DM55_RS13060 IPR029035 DHS-like NAD/FAD-binding domain DM55_RS13060 IPR029061 Thiamin diphosphate-binding fold DM55_RS13065 IPR004789 Acetolactate synthase, small subunit DM55_RS13065 IPR019455 Acetolactate synthase, small subunit, C-terminal DM55_RS13070 IPR000506 Acetohydroxy acid isomeroreductase C-terminal DM55_RS13070 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS13070 IPR013023 Acetohydroxy acid isomeroreductase DM55_RS13070 IPR013116 Acetohydroxy acid isomeroreductase, catalytic DM55_RS13070 IPR013328 Dehydrogenase, multihelical DM55_RS13070 IPR016040 NAD(P)-binding domain DM55_RS13070 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS13075 IPR003817 Phosphatidylserine decarboxylase-related DM55_RS13075 IPR033175 DM55_RS13075 DM55_RS13080 IPR000462 CDP-alcohol phosphatidyltransferase DM55_RS13080 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase DM55_RS13085 IPR002514 Transposase IS3/IS911family DM55_RS13085 IPR009057 Homeodomain-like DM55_RS13090 IPR001584 Integrase, catalytic core DM55_RS13090 IPR012337 Ribonuclease H-like domain DM55_RS13090 IPR025948 HTH-like domain DM55_RS13100 IPR001902 Sulphate anion transporter DM55_RS13100 IPR011547 Sulphate transporter DM55_RS13105 IPR001765 Carbonic anhydrase DM55_RS13105 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site DM55_RS13115 IPR028081 Leucine-binding protein domain DM55_RS13115 IPR028082 Periplasmic binding protein-like I DM55_RS13120 IPR000589 Ribosomal protein S15 DM55_RS13120 IPR005290 Ribosomal protein S15, bacterial-type DM55_RS13120 IPR009068 S15/NS1, RNA-binding DM55_RS13125 IPR001247 Exoribonuclease, phosphorolytic domain 1 DM55_RS13125 IPR003029 Ribosomal protein S1, RNA-binding domain DM55_RS13125 IPR004087 K Homology domain DM55_RS13125 IPR004088 K Homology domain, type 1 DM55_RS13125 IPR012162 Polyribonucleotide nucleotidyltransferase DM55_RS13125 IPR012340 Nucleic acid-binding, OB-fold DM55_RS13125 IPR015847 Exoribonuclease, phosphorolytic domain 2 DM55_RS13125 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain DM55_RS13125 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS13125 IPR022967 RNA-binding domain, S1 DM55_RS13125 IPR027408 PNPase/RNase PH domain DM55_RS13130 IPR002085 Alcohol dehydrogenase superfamily, zinc-type DM55_RS13130 IPR011032 GroES (chaperonin 10)-like DM55_RS13130 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS13130 IPR014189 Quinone oxidoreductase PIG3 DM55_RS13130 IPR016040 NAD(P)-binding domain DM55_RS13130 IPR020843 Polyketide synthase, enoylreductase DM55_RS13135 IPR000652 Triosephosphate isomerase DM55_RS13135 IPR013785 Aldolase-type TIM barrel DM55_RS13135 IPR020861 Triosephosphate isomerase, active site DM55_RS13135 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic DM55_RS13140 IPR004692 Preprotein translocase SecG subunit DM55_RS13150 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 DM55_RS13150 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid DM55_RS13155 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit DM55_RS13155 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit DM55_RS13160 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit DM55_RS13160 IPR010218 NADH dehydrogenase, subunit C DM55_RS13160 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site DM55_RS13165 IPR001135 NADH-quinone oxidoreductase, subunit D DM55_RS13165 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site DM55_RS13165 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H DM55_RS13165 IPR029014 NiFe hydrogenase-like DM55_RS13170 IPR002023 NADH-quinone oxidoreductase subunit E-like DM55_RS13170 IPR012336 Thioredoxin-like fold DM55_RS13175 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site DM55_RS13175 IPR011537 NADH ubiquinone oxidoreductase, F subunit DM55_RS13175 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit DM55_RS13175 IPR019554 Soluble ligand binding domain DM55_RS13175 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding DM55_RS13180 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site DM55_RS13180 IPR001041 2Fe-2S ferredoxin-type domain DM55_RS13180 IPR006656 Molybdopterin oxidoreductase DM55_RS13180 IPR010228 NADH:ubiquinone oxidoreductase, subunit G DM55_RS13180 IPR012675 Beta-grasp domain DM55_RS13180 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding DM55_RS13185 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H DM55_RS13185 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site DM55_RS13190 IPR010226 NADH-quinone oxidoreductase, chain I DM55_RS13190 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS13190 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS13195 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 DM55_RS13200 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K DM55_RS13205 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal DM55_RS13205 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase DM55_RS13205 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 DM55_RS13205 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup DM55_RS13210 IPR000260 NADH:ubiquinone oxidoreductase, chain 4, N-terminal DM55_RS13210 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase DM55_RS13210 IPR003918 NADH:ubiquinone oxidoreductase DM55_RS13210 IPR010227 NADH-quinone oxidoreductase, chain M/4 DM55_RS13215 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase DM55_RS13215 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 DM55_RS13220 IPR016768 Uncharacterised conserved protein UCP019883, membrane DM55_RS13225 IPR000086 NUDIX hydrolase domain DM55_RS13225 IPR015797 NUDIX hydrolase domain-like DM55_RS13225 IPR020084 NUDIX hydrolase, conserved site DM55_RS13230 IPR009562 Protein of unknown function DUF1178 DM55_RS13235 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS13235 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS13235 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS13235 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS13240 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS13240 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS13240 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS13245 IPR002539 MaoC-like domain DM55_RS13245 IPR029069 HotDog domain DM55_RS13250 IPR002539 MaoC-like domain DM55_RS13250 IPR029069 HotDog domain DM55_RS13255 IPR006626 Parallel beta-helix repeat DM55_RS13255 IPR011050 Pectin lyase fold/virulence factor DM55_RS13255 IPR012334 Pectin lyase fold DM55_RS13265 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS13265 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS13265 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS13265 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS13270 IPR002575 Aminoglycoside phosphotransferase DM55_RS13270 IPR011009 Protein kinase-like domain DM55_RS13275 IPR013078 Histidine phosphatase superfamily, clade-1 DM55_RS13275 IPR029033 Histidine phosphatase superfamily DM55_RS13280 IPR001753 Crotonase superfamily DM55_RS13280 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site DM55_RS13280 IPR029045 ClpP/crotonase-like domain DM55_RS13285 IPR004045 Glutathione S-transferase, N-terminal DM55_RS13285 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS13285 IPR012336 Thioredoxin-like fold DM55_RS13290 IPR004839 Aminotransferase, class I/classII DM55_RS13290 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS13290 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS13290 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS13295 IPR002716 PIN domain DM55_RS13295 IPR029060 PIN domain-like DM55_RS13300 IPR005583 Uncharacterised protein family UPF0246 DM55_RS13305 IPR000834 Peptidase M14, carboxypeptidase A DM55_RS13315 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family DM55_RS13320 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS13320 IPR010518 Flagellar regulatory FleQ DM55_RS13320 IPR011006 CheY-like superfamily DM55_RS13320 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS13320 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS13325 IPR021292 Protein of unknown function DUF2863 DM55_RS13345 IPR005471 Transcription regulator IclR, N-terminal DM55_RS13345 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS13345 IPR029016 GAF domain-like DM55_RS13350 IPR008557 Protein of unknown function DUF839 DM55_RS13360 IPR000944 Transcription regulator Rrf2-like DM55_RS13360 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS13365 IPR016040 NAD(P)-binding domain DM55_RS13370 IPR011051 RmlC-like cupin domain DM55_RS13370 IPR014710 RmlC-like jelly roll fold DM55_RS13375 IPR000485 AsnC-type HTH domain DM55_RS13375 IPR011008 Dimeric alpha-beta barrel DM55_RS13375 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS13375 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DM55_RS13375 IPR019887 Transcription regulator AsnC-type, C-terminal DM55_RS13375 IPR019888 Transcription regulator AsnC-type DM55_RS13380 IPR003439 ABC transporter-like DM55_RS13380 IPR003593 AAA+ ATPase domain DM55_RS13380 IPR017871 ABC transporter, conserved site DM55_RS13380 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13385 IPR000515 MetI-like domain DM55_RS13390 IPR026045 Ferric binding protein DM55_RS13400 IPR002293 Amino acid/polyamine transporter I DM55_RS13400 IPR004840 Amino acid permease, conserved site DM55_RS13400 IPR004841 Amino acid permease/ SLC12A domain DM55_RS13405 IPR032692 DM55_RS13405 DM55_RS13410 IPR011049 Serralysin-like metalloprotease, C-terminal DM55_RS13420 IPR006697 Exodeoxyribonuclease V, gamma subunit DM55_RS13420 IPR011335 Restriction endonuclease type II-like DM55_RS13420 IPR013986 DExx box DNA helicase domain DM55_RS13420 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13425 IPR000212 DNA helicase, UvrD/REP type DM55_RS13425 IPR004586 Exodeoxyribonuclease V, beta subunit DM55_RS13425 IPR011335 Restriction endonuclease type II-like DM55_RS13425 IPR011604 Exonuclease, phage-type/RecB, C-terminal DM55_RS13425 IPR014016 UvrD-like Helicase, ATP-binding domain DM55_RS13425 IPR014017 DNA helicase, UvrD-like, C-terminal DM55_RS13425 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13430 IPR006344 Exodeoxyribonuclease V, alpha subunit DM55_RS13430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13430 IPR027785 UvrD-like helicase C-terminal domain DM55_RS13435 IPR000352 Peptide chain release factor class I/class II DM55_RS13440 IPR001633 EAL domain DM55_RS13445 IPR000620 Drug/metabolite transporter DM55_RS13455 IPR008816 Glycine zipper 2TM domain DM55_RS13460 IPR002514 Transposase IS3/IS911family DM55_RS13460 IPR009057 Homeodomain-like DM55_RS13465 IPR001584 Integrase, catalytic core DM55_RS13465 IPR012337 Ribonuclease H-like domain DM55_RS13465 IPR025948 HTH-like domain DM55_RS13470 IPR002817 Thiamine biosynthesis protein ThiC DM55_RS13470 IPR025747 ThiC-associated domain DM55_RS13475 IPR014299 Pentapeptide MXKDX repeat protein DM55_RS13480 IPR010634 Protein of unknown function DUF1223 DM55_RS13480 IPR012336 Thioredoxin-like fold DM55_RS13485 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase DM55_RS13485 IPR016174 Di-haem cytochrome, transmembrane DM55_RS13490 IPR000572 Oxidoreductase, molybdopterin-binding domain DM55_RS13500 IPR000620 Drug/metabolite transporter DM55_RS13505 IPR011701 Major facilitator superfamily DM55_RS13505 IPR020846 Major facilitator superfamily domain DM55_RS13510 IPR007136 Protein of unknown function DUF347 DM55_RS13525 IPR004843 Calcineurin-like phosphoesterase domain, apaH type DM55_RS13525 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA DM55_RS13525 IPR029052 Metallo-dependent phosphatase-like DM55_RS13530 IPR003439 ABC transporter-like DM55_RS13530 IPR003593 AAA+ ATPase domain DM55_RS13530 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS13530 IPR012340 Nucleic acid-binding, OB-fold DM55_RS13530 IPR013611 Transport-associated OB, type 2 DM55_RS13530 IPR017871 ABC transporter, conserved site DM55_RS13530 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13535 IPR000515 MetI-like domain DM55_RS13550 IPR000515 MetI-like domain DM55_RS13560 IPR000843 Transcription regulator HTH, LacI DM55_RS13560 IPR001761 Periplasmic binding protein/LacI sugar binding domain DM55_RS13560 IPR010982 Lambda repressor-like, DNA-binding domain DM55_RS13560 IPR028082 Periplasmic binding protein-like I DM55_RS13565 IPR023614 Porin domain DM55_RS13580 IPR000160 GGDEF domain DM55_RS13580 IPR029787 Nucleotide cyclase DM55_RS13590 IPR002514 Transposase IS3/IS911family DM55_RS13590 IPR009057 Homeodomain-like DM55_RS13595 IPR009758 Protein of unknown function DUF1326 DM55_RS13600 IPR018688 Protein of unknown function DUF2182, transmembrane, metal-binding DM55_RS13605 IPR007396 Transcriptional regulator PAI 2-type DM55_RS13605 IPR012349 FMN-binding split barrel DM55_RS13610 IPR000524 Transcription regulator HTH, GntR DM55_RS13610 IPR004839 Aminotransferase, class I/classII DM55_RS13610 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS13610 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS13610 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS13620 IPR000485 AsnC-type HTH domain DM55_RS13620 IPR011008 Dimeric alpha-beta barrel DM55_RS13620 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS13620 IPR019887 Transcription regulator AsnC-type, C-terminal DM55_RS13620 IPR019888 Transcription regulator AsnC-type DM55_RS13625 IPR001347 Sugar isomerase (SIS) DM55_RS13625 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising DM55_RS13625 IPR017932 Glutamine amidotransferase type 2 domain DM55_RS13625 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS13630 IPR004294 Carotenoid oxygenase DM55_RS13635 IPR018715 Protein of unknown function DUF2239 DM55_RS13640 IPR000847 Transcription regulator HTH, LysR DM55_RS13640 IPR005119 LysR, substrate-binding DM55_RS13640 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS13645 IPR002347 Glucose/ribitol dehydrogenase DM55_RS13645 IPR016040 NAD(P)-binding domain DM55_RS13650 IPR018718 Protein of unknown function DUF2242 DM55_RS13655 IPR008318 Uncharacterised conserved protein UCP030820 DM55_RS13660 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DM55_RS13660 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DM55_RS13665 IPR021344 Protein of unknown function DUF2970 DM55_RS13670 IPR000524 Transcription regulator HTH, GntR DM55_RS13670 IPR004839 Aminotransferase, class I/classII DM55_RS13670 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS13670 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS13670 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS13670 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS13685 IPR002068 Alpha crystallin/Hsp20 domain DM55_RS13685 IPR008978 HSP20-like chaperone DM55_RS13685 IPR031107 DM55_RS13685 DM55_RS13690 IPR002068 Alpha crystallin/Hsp20 domain DM55_RS13690 IPR008978 HSP20-like chaperone DM55_RS13690 IPR031107 DM55_RS13690 DM55_RS13695 IPR005560 Protein of unknown function DUF326 DM55_RS13705 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising DM55_RS13705 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal DM55_RS13705 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal DM55_RS13705 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site DM55_RS13710 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS13710 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS13710 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS13710 IPR013328 Dehydrogenase, multihelical DM55_RS13710 IPR016040 NAD(P)-binding domain DM55_RS13710 IPR022694 3-hydroxyacyl-CoA dehydrogenase DM55_RS13715 IPR000847 Transcription regulator HTH, LysR DM55_RS13715 IPR005119 LysR, substrate-binding DM55_RS13715 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS13720 IPR004690 Malonate transporter MadL subunit DM55_RS13725 IPR004691 Malonate/sodium symporter MadM subunit DM55_RS13725 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal DM55_RS13735 IPR004165 Coenzyme A transferase family I DM55_RS13735 IPR005777 Malonate decarboxylase, alpha subunit DM55_RS13740 IPR009662 Malonate decarboxylase delta subunit DM55_RS13740 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein DM55_RS13745 IPR000022 Carboxyl transferase DM55_RS13745 IPR017556 Malonate decarboxylase, beta subunit DM55_RS13745 IPR029045 ClpP/crotonase-like domain DM55_RS13750 IPR009648 Malonate decarboxylase gamma subunit DM55_RS13750 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal DM55_RS13750 IPR029045 ClpP/crotonase-like domain DM55_RS13755 IPR017557 Phosphoribosyl-dephospho-CoA transferase DM55_RS13760 IPR002736 Triphosphoribosyl-dephospho-CoA protein DM55_RS13760 IPR017555 Triphosphoribosyl-dephospho-CoA synthase DM55_RS13765 IPR001227 Acyl transferase domain DM55_RS13765 IPR014043 Acyl transferase DM55_RS13765 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DM55_RS13765 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DM55_RS13765 IPR017554 Malonate decarboxylase, McdH subunit DM55_RS13765 IPR020801 Polyketide synthase, acyl transferase domain DM55_RS13770 IPR025202 Phospholipase D-like domain DM55_RS13780 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 DM55_RS13780 IPR022742 Putative lysophospholipase DM55_RS13780 IPR029058 Alpha/Beta hydrolase fold DM55_RS13785 IPR004045 Glutathione S-transferase, N-terminal DM55_RS13785 IPR012336 Thioredoxin-like fold DM55_RS13795 IPR002514 Transposase IS3/IS911family DM55_RS13795 IPR009057 Homeodomain-like DM55_RS13800 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS13810 IPR005828 General substrate transporter DM55_RS13810 IPR005829 Sugar transporter, conserved site DM55_RS13810 IPR020846 Major facilitator superfamily domain DM55_RS13815 IPR003844 Uncharacterised protein family UPF0060 DM55_RS13820 IPR006054 DNA polymerase III, epsilon subunit DM55_RS13820 IPR006309 DNA polymerase 3, epsilon subunit DM55_RS13820 IPR012337 Ribonuclease H-like domain DM55_RS13820 IPR013520 Exonuclease, RNase T/DNA polymerase III DM55_RS13825 IPR002156 Ribonuclease H domain DM55_RS13825 IPR012337 Ribonuclease H-like domain DM55_RS13825 IPR022892 Ribonuclease H DM55_RS13830 IPR013216 Methyltransferase type 11 DM55_RS13830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS13835 IPR001279 Beta-lactamase-like DM55_RS13835 IPR017782 Hydroxyacylglutathione hydrolase DM55_RS13835 IPR032282 DM55_RS13835 DM55_RS13840 IPR000189 Prokaryotic transglycosylase, active site DM55_RS13840 IPR008258 Lytic transglycosylase-like SLT domain DM55_RS13840 IPR018392 LysM domain DM55_RS13840 IPR023346 Lysozyme-like domain DM55_RS13845 IPR011701 Major facilitator superfamily DM55_RS13845 IPR020846 Major facilitator superfamily domain DM55_RS13855 IPR009057 Homeodomain-like DM55_RS13855 IPR018060 DNA binding HTH domain, AraC-type DM55_RS13855 IPR020449 Transcription regulator HTH, AraC- type DM55_RS13855 IPR032687 DM55_RS13855 DM55_RS13860 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain DM55_RS13860 IPR006274 Carbamoyl-phosphate synthase, small subunit DM55_RS13860 IPR017926 Glutamine amidotransferase DM55_RS13860 IPR029062 Class I glutamine amidotransferase-like DM55_RS13865 IPR001123 Lysine-type exporter protein (LYSE/YGGA) DM55_RS13870 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain DM55_RS13870 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain DM55_RS13870 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain DM55_RS13870 IPR006275 Carbamoyl-phosphate synthase, large subunit DM55_RS13870 IPR011607 Methylglyoxal synthase-like domain DM55_RS13870 IPR013815 ATP-grasp fold, subdomain 1 DM55_RS13870 IPR013816 ATP-grasp fold, subdomain 2 DM55_RS13870 IPR016185 Pre-ATP-grasp domain DM55_RS13875 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal DM55_RS13875 IPR006359 Transcription elongation factor GreA DM55_RS13875 IPR018151 Transcription elongation factor, GreA/GreB, conserved site DM55_RS13875 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal DM55_RS13875 IPR023459 Transcription elongation factor GreA/GreB family DM55_RS13875 IPR028624 Transcription elongation factor GreA/GreB DM55_RS13880 IPR025423 Domain of unknown function DUF4149 DM55_RS13885 IPR001890 RNA-binding, CRM domain DM55_RS13890 IPR002877 Ribosomal RNA methyltransferase FtsJ domain DM55_RS13890 IPR015507 Ribosomal RNA large subunit methyltransferase E DM55_RS13890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS13895 IPR000642 Peptidase M41 DM55_RS13895 IPR003593 AAA+ ATPase domain DM55_RS13895 IPR003959 ATPase, AAA-type, core DM55_RS13895 IPR003960 ATPase, AAA-type, conserved site DM55_RS13895 IPR005936 Peptidase, FtsH DM55_RS13895 IPR011546 Peptidase M41, FtsH extracellular DM55_RS13895 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13900 IPR000489 Pterin-binding DM55_RS13900 IPR006390 Dihydropteroate synthase DM55_RS13900 IPR011005 Dihydropteroate synthase-like DM55_RS13905 IPR005841 Alpha-D-phosphohexomutase superfamily DM55_RS13905 IPR005843 Alpha-D-phosphohexomutase, C-terminal DM55_RS13905 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I DM55_RS13905 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II DM55_RS13905 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III DM55_RS13905 IPR006352 Phosphoglucosamine mutase DM55_RS13905 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III DM55_RS13905 IPR016066 Alpha-D-phosphohexomutase, conserved site DM55_RS13910 IPR005673 ABC transporter, phosphate-binding protein PstS DM55_RS13910 IPR024370 PBP domain DM55_RS13915 IPR000515 MetI-like domain DM55_RS13915 IPR011864 Phosphate ABC transporter, permease protein PstC DM55_RS13920 IPR000515 MetI-like domain DM55_RS13920 IPR005672 Phosphate transport system permease protein PstA DM55_RS13925 IPR003439 ABC transporter-like DM55_RS13925 IPR003593 AAA+ ATPase domain DM55_RS13925 IPR005670 Phosphate transport system permease protein 1 DM55_RS13925 IPR017871 ABC transporter, conserved site DM55_RS13925 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS13930 IPR026022 PhoU domain DM55_RS13930 IPR028366 Phosphate transport system protein PhoU DM55_RS13935 IPR001789 Signal transduction response regulator, receiver domain DM55_RS13935 IPR001867 Signal transduction response regulator, C-terminal DM55_RS13935 IPR011006 CheY-like superfamily DM55_RS13935 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB DM55_RS13935 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS13935 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS13940 IPR000014 PAS domain DM55_RS13940 IPR003594 Histidine kinase-like ATPase, C-terminal domain DM55_RS13940 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain DM55_RS13940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal DM55_RS13940 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR DM55_RS13940 IPR021766 Protein of unknown function DUF3329 DM55_RS13945 IPR003414 Polyphosphate kinase DM55_RS13945 IPR024953 Polyphosphate kinase middle domain DM55_RS13945 IPR025198 Polyphosphate kinase N-terminal domain DM55_RS13945 IPR025200 Polyphosphate kinase C-terminal domain DM55_RS13950 IPR003695 Ppx/GppA phosphatase DM55_RS13950 IPR022371 Exopolyphosphatase DM55_RS13950 IPR030673 DM55_RS13950 DM55_RS13960 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DM55_RS13960 IPR026841 DM55_RS13960 DM55_RS13980 IPR021225 Protein of unknown function DUF2778 DM55_RS13990 IPR004449 Phosphohistidine phosphatase SixA, subgroup DM55_RS13990 IPR013078 Histidine phosphatase superfamily, clade-1 DM55_RS13990 IPR029033 Histidine phosphatase superfamily DM55_RS13995 IPR016181 Acyl-CoA N-acyltransferase DM55_RS14010 IPR002528 Multi antimicrobial extrusion protein DM55_RS14015 IPR018741 Protein of unknown function DUF2288 DM55_RS14020 IPR000873 AMP-dependent synthetase/ligase DM55_RS14020 IPR020845 AMP-binding, conserved site DM55_RS14020 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS14025 IPR011055 Duplicated hybrid motif DM55_RS14025 IPR016047 Peptidase M23 DM55_RS14025 IPR018392 LysM domain DM55_RS14035 IPR001584 Integrase, catalytic core DM55_RS14035 IPR002514 Transposase IS3/IS911family DM55_RS14035 IPR009057 Homeodomain-like DM55_RS14035 IPR012337 Ribonuclease H-like domain DM55_RS14035 IPR025948 HTH-like domain DM55_RS14040 IPR028904 Tox-REase-5 domain DM55_RS14050 IPR025391 Domain of unknown function DUF4123 DM55_RS14055 IPR008727 PAAR motif DM55_RS14060 IPR000551 MerR-type HTH domain DM55_RS14060 IPR007213 Leucine carboxyl methyltransferase DM55_RS14060 IPR009061 DNA binding domain, putative DM55_RS14060 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative DM55_RS14060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS14065 IPR000524 Transcription regulator HTH, GntR DM55_RS14065 IPR004839 Aminotransferase, class I/classII DM55_RS14065 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS14065 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS14065 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS14065 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS14070 IPR032710 DM55_RS14070 DM55_RS14075 IPR029039 Flavoprotein-like DM55_RS14080 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DM55_RS14080 IPR012767 Malto-oligosyltrehalose synthase DM55_RS14080 IPR013781 Glycoside hydrolase, catalytic domain DM55_RS14080 IPR013797 Maltooligosyl trehalose synthase, N-terminal DM55_RS14080 IPR015902 Glycoside hydrolase, family 13 DM55_RS14080 IPR017853 Glycoside hydrolase, superfamily DM55_RS14085 IPR003385 Glycoside hydrolase, family 77 DM55_RS14085 IPR013781 Glycoside hydrolase, catalytic domain DM55_RS14085 IPR017853 Glycoside hydrolase, superfamily DM55_RS14090 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DM55_RS14090 IPR012768 Malto-oligosyltrehalose trehalohydrolase DM55_RS14090 IPR013781 Glycoside hydrolase, catalytic domain DM55_RS14090 IPR013783 Immunoglobulin-like fold DM55_RS14090 IPR014756 Immunoglobulin E-set DM55_RS14090 IPR015902 Glycoside hydrolase, family 13 DM55_RS14090 IPR017853 Glycoside hydrolase, superfamily DM55_RS14090 IPR022567 Domain of unknown function DUF3459 DM55_RS14095 IPR004193 Glycoside hydrolase, family 13, N-terminal DM55_RS14095 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DM55_RS14095 IPR011837 Glycogen debranching enzyme, GlgX type DM55_RS14095 IPR013780 Glycosyl hydrolase, family 13, all-beta DM55_RS14095 IPR013781 Glycoside hydrolase, catalytic domain DM55_RS14095 IPR013783 Immunoglobulin-like fold DM55_RS14095 IPR014756 Immunoglobulin E-set DM55_RS14095 IPR015902 Glycoside hydrolase, family 13 DM55_RS14095 IPR017853 Glycoside hydrolase, superfamily DM55_RS14105 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DM55_RS14105 IPR011009 Protein kinase-like domain DM55_RS14105 IPR012810 Trehalose synthase/alpha-amylase, N-terminal DM55_RS14105 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain DM55_RS14105 IPR013780 Glycosyl hydrolase, family 13, all-beta DM55_RS14105 IPR013781 Glycoside hydrolase, catalytic domain DM55_RS14105 IPR015902 Glycoside hydrolase, family 13 DM55_RS14105 IPR017853 Glycoside hydrolase, superfamily DM55_RS14105 IPR032091 DM55_RS14105 DM55_RS14110 IPR006047 Glycosyl hydrolase, family 13, catalytic domain DM55_RS14110 IPR013781 Glycoside hydrolase, catalytic domain DM55_RS14110 IPR015902 Glycoside hydrolase, family 13 DM55_RS14110 IPR017853 Glycoside hydrolase, superfamily DM55_RS14110 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S DM55_RS14110 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase DM55_RS14120 IPR003961 Fibronectin, type III DM55_RS14120 IPR010126 Esterase, PHB depolymerase DM55_RS14120 IPR013783 Immunoglobulin-like fold DM55_RS14120 IPR029058 Alpha/Beta hydrolase fold DM55_RS14145 IPR013781 Glycoside hydrolase, catalytic domain DM55_RS14145 IPR017853 Glycoside hydrolase, superfamily DM55_RS14145 IPR024745 Glycoside hydrolase, family 44 DM55_RS14150 IPR000847 Transcription regulator HTH, LysR DM55_RS14150 IPR005119 LysR, substrate-binding DM55_RS14150 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS14155 IPR001789 Signal transduction response regulator, receiver domain DM55_RS14155 IPR001867 Signal transduction response regulator, C-terminal DM55_RS14155 IPR011006 CheY-like superfamily DM55_RS14155 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS14160 IPR025016 Protein of unknown function DUF3955 DM55_RS14165 IPR008617 Uncharacterised protein family, YcgJ DM55_RS14180 IPR001789 Signal transduction response regulator, receiver domain DM55_RS14180 IPR001867 Signal transduction response regulator, C-terminal DM55_RS14180 IPR011006 CheY-like superfamily DM55_RS14180 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS14190 IPR005594 YadA-like, C-terminal DM55_RS14190 IPR008635 Coiled stalk of trimeric autotransporter adhesin DM55_RS14190 IPR008640 Head domain of trimeric autotransporter adhesin DM55_RS14190 IPR011049 Serralysin-like metalloprotease, C-terminal DM55_RS14190 IPR024973 ESPR domain DM55_RS14195 IPR006664 Outer membrane protein, bacterial DM55_RS14195 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal DM55_RS14195 IPR006690 Outer membrane protein, OmpA-like, conserved site DM55_RS14200 IPR011990 Tetratricopeptide-like helical domain DM55_RS14200 IPR019734 Tetratricopeptide repeat DM55_RS14205 IPR001801 Histone-like protein H-NS DM55_RS14205 IPR027444 Histone-like protein H-NS, C-terminal domain DM55_RS14215 IPR003782 Copper chaperone SCO1/SenC DM55_RS14215 IPR012336 Thioredoxin-like fold DM55_RS14220 IPR009056 Cytochrome c-like domain DM55_RS14225 IPR000772 Ricin B lectin domain DM55_RS14225 IPR006652 Kelch repeat type 1 DM55_RS14225 IPR011043 Galactose oxidase/kelch, beta-propeller DM55_RS14225 IPR013783 Immunoglobulin-like fold DM55_RS14225 IPR014756 Immunoglobulin E-set DM55_RS14225 IPR015202 Domain of unknown function DUF1929 DM55_RS14225 IPR015916 Galactose oxidase, beta-propeller DM55_RS14230 IPR013094 Alpha/beta hydrolase fold-3 DM55_RS14230 IPR029058 Alpha/Beta hydrolase fold DM55_RS14245 IPR010272 Type VI secretion system, VCA0110 DM55_RS14255 IPR008727 PAAR motif DM55_RS14260 IPR006531 Gp5 N-terminal DM55_RS14260 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset DM55_RS14260 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal DM55_RS14260 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain DM55_RS14265 IPR025391 Domain of unknown function DUF4123 DM55_RS14270 IPR001584 Integrase, catalytic core DM55_RS14270 IPR012337 Ribonuclease H-like domain DM55_RS14270 IPR025948 HTH-like domain DM55_RS14280 IPR000551 MerR-type HTH domain DM55_RS14280 IPR009061 DNA binding domain, putative DM55_RS14290 IPR003423 Outer membrane efflux protein DM55_RS14290 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DM55_RS14295 IPR001036 Acriflavin resistance protein DM55_RS14295 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DM55_RS14300 IPR006143 RND efflux pump, membrane fusion protein DM55_RS14300 IPR032317 DM55_RS14300 DM55_RS14305 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS14305 IPR009057 Homeodomain-like DM55_RS14305 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DM55_RS14305 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS14310 IPR000644 CBS domain DM55_RS14310 IPR001807 Chloride channel, voltage gated DM55_RS14310 IPR014743 Chloride channel, core DM55_RS14315 IPR004630 Uncharacterised protein family UPF0324, bacteria DM55_RS14315 IPR018383 Uncharacterised protein family UPF0324, prokaryote DM55_RS14320 IPR000847 Transcription regulator HTH, LysR DM55_RS14320 IPR005119 LysR, substrate-binding DM55_RS14320 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS14325 IPR025962 SdpI/YhfL protein family DM55_RS14330 IPR013022 Xylose isomerase-like, TIM barrel domain DM55_RS14335 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site DM55_RS14335 IPR011611 Carbohydrate kinase PfkB DM55_RS14335 IPR029056 Ribokinase-like DM55_RS14340 IPR011701 Major facilitator superfamily DM55_RS14340 IPR020846 Major facilitator superfamily domain DM55_RS14350 IPR000843 Transcription regulator HTH, LacI DM55_RS14350 IPR010982 Lambda repressor-like, DNA-binding domain DM55_RS14350 IPR028082 Periplasmic binding protein-like I DM55_RS14355 IPR011397 Uncharacterised conserved protein UCP033101 DM55_RS14360 IPR021389 Protein of unknown function DUF3022 DM55_RS14370 IPR025688 PGDYG protein DM55_RS14375 IPR010126 Esterase, PHB depolymerase DM55_RS14375 IPR029058 Alpha/Beta hydrolase fold DM55_RS14380 IPR012899 LTXXQ motif family protein DM55_RS14385 IPR000873 AMP-dependent synthetase/ligase DM55_RS14385 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS14390 IPR013120 Male sterility, NAD-binding DM55_RS14390 IPR016040 NAD(P)-binding domain DM55_RS14405 IPR000485 AsnC-type HTH domain DM55_RS14405 IPR011008 Dimeric alpha-beta barrel DM55_RS14405 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS14405 IPR019887 Transcription regulator AsnC-type, C-terminal DM55_RS14405 IPR019888 Transcription regulator AsnC-type DM55_RS14420 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase DM55_RS14420 IPR016040 NAD(P)-binding domain DM55_RS14420 IPR032095 DM55_RS14420 DM55_RS14430 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14435 IPR011724 Cyd operon protein YbgT DM55_RS14435 IPR012994 Membrane bound YbgT-like DM55_RS14440 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB DM55_RS14440 IPR004488 Magnesium/cobalt transport protein CorA DM55_RS14445 IPR005545 YCII-related DM55_RS14445 IPR011008 Dimeric alpha-beta barrel DM55_RS14465 IPR006685 Mechanosensitive ion channel MscS DM55_RS14465 IPR010920 Like-Sm (LSM) domain DM55_RS14465 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 DM55_RS14465 IPR011066 Mechanosensitive ion channel MscS, C-terminal DM55_RS14465 IPR022249 Protein of unknown function DUF3772 DM55_RS14470 IPR007329 FMN-binding DM55_RS14470 IPR011399 Nitrous oxide reductase expression regulator NosR DM55_RS14470 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS14470 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS14475 IPR002323 Cytochrome c, class IE DM55_RS14475 IPR009056 Cytochrome c-like domain DM55_RS14490 IPR008719 Nitrous oxide reductase accessory protein NosL DM55_RS14495 IPR032688 DM55_RS14495 DM55_RS14500 IPR003439 ABC transporter-like DM55_RS14500 IPR003593 AAA+ ATPase domain DM55_RS14500 IPR017871 ABC transporter, conserved site DM55_RS14500 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14505 IPR006626 Parallel beta-helix repeat DM55_RS14505 IPR006633 Carbohydrate-binding/sugar hydrolysis domain DM55_RS14505 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain DM55_RS14505 IPR011050 Pectin lyase fold/virulence factor DM55_RS14505 IPR012334 Pectin lyase fold DM55_RS14505 IPR022441 Parallel beta-helix repeat-2 DM55_RS14505 IPR026464 Nitrous oxide reductase family maturation protein NosD DM55_RS14510 IPR002429 Cytochrome c oxidase subunit II C-terminal DM55_RS14510 IPR008972 Cupredoxin DM55_RS14510 IPR011045 Nitrous oxide reductase, N-terminal DM55_RS14510 IPR015943 WD40/YVTN repeat-like-containing domain DM55_RS14510 IPR023644 Nitrous-oxide reductase DM55_RS14515 IPR003374 ApbE-like domain DM55_RS14515 IPR024932 Flavin transferase ApbE DM55_RS14520 IPR003439 ABC transporter-like DM55_RS14520 IPR003593 AAA+ ATPase domain DM55_RS14520 IPR017871 ABC transporter, conserved site DM55_RS14520 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14525 IPR000412 ABC-2 transporter DM55_RS14525 IPR013525 ABC-2 type transporter DM55_RS14530 IPR003660 HAMP linker domain DM55_RS14530 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS14530 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS14540 IPR004006 Dak kinase DM55_RS14540 IPR004007 DhaL domain DM55_RS14550 IPR017941 Rieske [2Fe-2S] iron-sulphur domain DM55_RS14555 IPR006153 Cation/H+ exchanger DM55_RS14560 IPR006905 Tryptophan halogenase DM55_RS14560 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS14590 IPR010126 Esterase, PHB depolymerase DM55_RS14590 IPR029058 Alpha/Beta hydrolase fold DM55_RS14600 IPR000014 PAS domain DM55_RS14600 IPR013978 MEKHLA DM55_RS14605 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS14605 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger DM55_RS14605 IPR032877 DM55_RS14605 DM55_RS14620 IPR001829 Pili assembly chaperone, bacterial DM55_RS14620 IPR008962 PapD-like DM55_RS14620 IPR016147 PapD, N-terminal, bacterial DM55_RS14620 IPR016148 Pili assembly chaperone, C-terminal domain DM55_RS14625 IPR000015 Outer membrane usher protein DM55_RS14625 IPR018030 Fimbrial membrane usher, conserved site DM55_RS14625 IPR025885 PapC, N-terminal domain DM55_RS14625 IPR025949 PapC-like, C-terminal domain DM55_RS14630 IPR000259 Fimbrial-type adhesion domain DM55_RS14630 IPR008966 Adhesion domain DM55_RS14655 IPR005594 YadA-like, C-terminal DM55_RS14670 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS14670 IPR001789 Signal transduction response regulator, receiver domain DM55_RS14670 IPR011006 CheY-like superfamily DM55_RS14670 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS14670 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS14680 IPR002514 Transposase IS3/IS911family DM55_RS14680 IPR009057 Homeodomain-like DM55_RS14685 IPR000515 MetI-like domain DM55_RS14685 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family DM55_RS14690 IPR001320 Ionotropic glutamate receptor DM55_RS14690 IPR001638 Extracellular solute-binding protein, family 3 DM55_RS14690 IPR018313 Extracellular solute-binding protein, family 3, conserved site DM55_RS14695 IPR001295 Dihydroorotate dehydrogenase, conserved site DM55_RS14695 IPR005719 Dihydroorotate dehydrogenase, class 2 DM55_RS14695 IPR005720 Dihydroorotate dehydrogenase domain DM55_RS14695 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 DM55_RS14695 IPR013785 Aldolase-type TIM barrel DM55_RS14700 IPR007471 Arginine-tRNA-protein transferase, N-terminal DM55_RS14700 IPR007472 Arginine-tRNA-protein transferase, C-terminal DM55_RS14700 IPR016181 Acyl-CoA N-acyltransferase DM55_RS14700 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic DM55_RS14700 IPR030700 DM55_RS14700 DM55_RS14705 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase DM55_RS14705 IPR016181 Acyl-CoA N-acyltransferase DM55_RS14710 IPR000086 NUDIX hydrolase domain DM55_RS14710 IPR015797 NUDIX hydrolase domain-like DM55_RS14710 IPR020084 NUDIX hydrolase, conserved site DM55_RS14710 IPR020476 NUDIX hydrolase DM55_RS14710 IPR029401 Nudix hydrolase, N-terminal DM55_RS14720 IPR005624 Domain of unknown function DUF336 DM55_RS14720 IPR010371 Uncharacterised protein family UPF0303 DM55_RS14725 IPR000390 Small multidrug resistance protein family DM55_RS14730 IPR014748 Crontonase, C-terminal DM55_RS14730 IPR029045 ClpP/crotonase-like domain DM55_RS14730 IPR032259 DM55_RS14730 DM55_RS14740 IPR011251 Luciferase-like domain DM55_RS14740 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent DM55_RS14745 IPR000515 MetI-like domain DM55_RS14750 IPR003439 ABC transporter-like DM55_RS14750 IPR003593 AAA+ ATPase domain DM55_RS14750 IPR017871 ABC transporter, conserved site DM55_RS14750 IPR017875 ABC transporter, aliphatic sulphonate import, ATP-binding protein DM55_RS14750 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14755 IPR004606 Molybdenum-pterin binding DM55_RS14755 IPR005116 Transport-associated OB, type 1 DM55_RS14755 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS14760 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS14770 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS14780 IPR001584 Integrase, catalytic core DM55_RS14780 IPR012337 Ribonuclease H-like domain DM55_RS14780 IPR025948 HTH-like domain DM55_RS14785 IPR010650 PrkA C-terminal domain DM55_RS14785 IPR013153 PrkA AAA domain DM55_RS14785 IPR016230 Serine-protein kinase, PrkA DM55_RS14785 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14790 IPR002035 von Willebrand factor, type A DM55_RS14790 IPR006698 Thermus phage phiYS40, Orf56 DM55_RS14795 IPR007390 Sporulation stage V, protein R DM55_RS14800 IPR004736 Citrate-proton symport DM55_RS14800 IPR005829 Sugar transporter, conserved site DM55_RS14800 IPR011701 Major facilitator superfamily DM55_RS14800 IPR020846 Major facilitator superfamily domain DM55_RS14810 IPR008160 Collagen triple helix repeat DM55_RS14815 IPR003439 ABC transporter-like DM55_RS14815 IPR003593 AAA+ ATPase domain DM55_RS14815 IPR017871 ABC transporter, conserved site DM55_RS14815 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14820 IPR000515 MetI-like domain DM55_RS14825 IPR007047 Flp/Fap pilin component DM55_RS14830 IPR000045 Prepilin type IV endopeptidase, peptidase domain DM55_RS14835 IPR017592 Pilus assembly, Flp-type CpaB DM55_RS14835 IPR031571 DM55_RS14835 DM55_RS14840 IPR001775 GspD/PilQ family DM55_RS14840 IPR004846 Type II/III secretion system DM55_RS14840 IPR032789 DM55_RS14840 DM55_RS14845 IPR019027 Pilus biogenesis CpaD-related DM55_RS14850 IPR011006 CheY-like superfamily DM55_RS14850 IPR025669 AAA domain DM55_RS14850 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14855 IPR001482 Type II secretion system protein E DM55_RS14855 IPR003593 AAA+ ATPase domain DM55_RS14855 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14860 IPR018076 Type II secretion system F domain DM55_RS14865 IPR018076 Type II secretion system F domain DM55_RS14870 IPR011990 Tetratricopeptide-like helical domain DM55_RS14875 IPR012495 TadE-like DM55_RS14880 IPR012495 TadE-like DM55_RS14880 IPR018705 Domain of unknown function DUF2134, membrane DM55_RS14885 IPR001638 Extracellular solute-binding protein, family 3 DM55_RS14900 IPR000515 MetI-like domain DM55_RS14900 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family DM55_RS14905 IPR000515 MetI-like domain DM55_RS14905 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family DM55_RS14910 IPR011055 Duplicated hybrid motif DM55_RS14910 IPR016047 Peptidase M23 DM55_RS14915 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS14915 IPR009057 Homeodomain-like DM55_RS14915 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DM55_RS14915 IPR013572 Transcription regulator MAATS, C-terminal DM55_RS14915 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS14920 IPR006143 RND efflux pump, membrane fusion protein DM55_RS14920 IPR032317 DM55_RS14920 DM55_RS14925 IPR001036 Acriflavin resistance protein DM55_RS14925 IPR025949 PapC-like, C-terminal domain DM55_RS14925 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DM55_RS14930 IPR001829 Pili assembly chaperone, bacterial DM55_RS14930 IPR008962 PapD-like DM55_RS14930 IPR016147 PapD, N-terminal, bacterial DM55_RS14930 IPR016148 Pili assembly chaperone, C-terminal domain DM55_RS14930 IPR018046 Pili assembly chaperone, conserved site DM55_RS14935 IPR000259 Fimbrial-type adhesion domain DM55_RS14935 IPR008966 Adhesion domain DM55_RS14940 IPR003439 ABC transporter-like DM55_RS14940 IPR003593 AAA+ ATPase domain DM55_RS14940 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS14940 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14950 IPR002514 Transposase IS3/IS911family DM55_RS14950 IPR009057 Homeodomain-like DM55_RS14960 IPR001962 Asparagine synthase DM55_RS14960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS14960 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS14965 IPR032708 DM55_RS14965 DM55_RS14970 IPR003313 AraC-type arabinose-binding/dimerisation domain DM55_RS14970 IPR009057 Homeodomain-like DM55_RS14970 IPR018060 DNA binding HTH domain, AraC-type DM55_RS14970 IPR018062 HTH domain AraC-type, conserved site DM55_RS14975 IPR025997 Periplasmic binding protein domain DM55_RS14975 IPR028082 Periplasmic binding protein-like I DM55_RS14980 IPR003439 ABC transporter-like DM55_RS14980 IPR003593 AAA+ ATPase domain DM55_RS14980 IPR017871 ABC transporter, conserved site DM55_RS14980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS14985 IPR001851 ABC transporter, permease DM55_RS14990 IPR002085 Alcohol dehydrogenase superfamily, zinc-type DM55_RS14990 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site DM55_RS14990 IPR011032 GroES (chaperonin 10)-like DM55_RS14990 IPR013149 Alcohol dehydrogenase, C-terminal DM55_RS14990 IPR013154 Alcohol dehydrogenase GroES-like DM55_RS14990 IPR016040 NAD(P)-binding domain DM55_RS14995 IPR000577 DM55_RS14995 DM55_RS14995 IPR018483 Carbohydrate kinase, FGGY, conserved site DM55_RS14995 IPR018484 Carbohydrate kinase, FGGY, N-terminal DM55_RS14995 IPR018485 Carbohydrate kinase, FGGY, C-terminal DM55_RS15000 IPR002347 Glucose/ribitol dehydrogenase DM55_RS15000 IPR016040 NAD(P)-binding domain DM55_RS15000 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS15010 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS15010 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS15010 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 DM55_RS15010 IPR013324 RNA polymerase sigma factor, region 3/4 DM55_RS15010 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS15010 IPR014284 RNA polymerase sigma-70 like domain DM55_RS15015 IPR005153 MbtH-like protein DM55_RS15020 IPR003819 Taurine catabolism dioxygenase TauD/TfdA DM55_RS15025 IPR003439 ABC transporter-like DM55_RS15025 IPR003593 AAA+ ATPase domain DM55_RS15025 IPR017871 ABC transporter, conserved site DM55_RS15025 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15030 IPR000522 ABC transporter, permease protein DM55_RS15030 IPR029022 ABC transporter, BtuC-like DM55_RS15035 IPR008090 Ferric iron reductase DM55_RS15035 IPR022770 Ferric iron reductase FhuF domain DM55_RS15035 IPR024726 Ferric iron reductase, C-terminal DM55_RS15040 IPR002491 ABC transporter periplasmic binding domain DM55_RS15040 IPR008091 Ferrichrome-binding periplasmic protein DM55_RS15045 IPR018531 Domain of unknown function DUF1993 DM55_RS15045 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase DM55_RS15050 IPR003439 ABC transporter-like DM55_RS15050 IPR003593 AAA+ ATPase domain DM55_RS15050 IPR005898 Cyclic peptide transporter DM55_RS15050 IPR011527 ABC transporter type 1, transmembrane domain DM55_RS15050 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15055 IPR000873 AMP-dependent synthetase/ligase DM55_RS15055 IPR001242 Condensation domain DM55_RS15055 IPR006162 Phosphopantetheine attachment site DM55_RS15055 IPR009081 Acyl carrier protein-like DM55_RS15055 IPR010060 Non-ribosomal peptide synthase DM55_RS15055 IPR010071 Amino acid adenylation domain DM55_RS15055 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS15055 IPR020845 AMP-binding, conserved site DM55_RS15055 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS15060 IPR000873 AMP-dependent synthetase/ligase DM55_RS15060 IPR001242 Condensation domain DM55_RS15060 IPR006162 Phosphopantetheine attachment site DM55_RS15060 IPR009081 Acyl carrier protein-like DM55_RS15060 IPR010071 Amino acid adenylation domain DM55_RS15060 IPR020845 AMP-binding, conserved site DM55_RS15060 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS15065 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS15065 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase DM55_RS15070 IPR000531 TonB-dependent receptor, beta-barrel DM55_RS15070 IPR010105 TonB-dependent siderophore receptor DM55_RS15070 IPR012910 TonB-dependent receptor, plug DM55_RS15075 IPR002376 Formyl transferase, N-terminal DM55_RS15085 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain DM55_RS15085 IPR011698 CobB/CobQ-like glutamine amidotransferase DM55_RS15085 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15085 IPR029062 Class I glutamine amidotransferase-like DM55_RS15090 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR DM55_RS15090 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15095 IPR002750 CobE/GbiG C-terminal domain DM55_RS15100 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria DM55_RS15100 IPR011541 Nickel/cobalt transporter, high-affinity DM55_RS15105 IPR003495 CobW/HypB/UreG domain DM55_RS15105 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DM55_RS15105 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW DM55_RS15105 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15110 IPR003672 CobN/magnesium chelatase DM55_RS15110 IPR011953 Cobaltochelatase, CobN subunit DM55_RS15120 IPR003593 AAA+ ATPase domain DM55_RS15120 IPR011704 ATPase, dynein-related, AAA domain DM55_RS15120 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15125 IPR002035 von Willebrand factor, type A DM55_RS15130 IPR003140 Phospholipase/carboxylesterase/thioesterase DM55_RS15130 IPR029058 Alpha/Beta hydrolase fold DM55_RS15140 IPR001223 Glycoside hydrolase, family 18, catalytic domain DM55_RS15140 IPR003610 Carbohydrate-binding module family 5/12 DM55_RS15140 IPR013781 Glycoside hydrolase, catalytic domain DM55_RS15140 IPR017853 Glycoside hydrolase, superfamily DM55_RS15145 IPR000878 Tetrapyrrole methylase DM55_RS15145 IPR006363 Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core DM55_RS15145 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS15145 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS15145 IPR021744 Cobalamin synthesis G, N-terminal DM55_RS15150 IPR000878 Tetrapyrrole methylase DM55_RS15150 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DM55_RS15150 IPR006364 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core DM55_RS15150 IPR012382 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase DM55_RS15150 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS15155 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase DM55_RS15160 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain DM55_RS15160 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain DM55_RS15160 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like DM55_RS15165 IPR000878 Tetrapyrrole methylase DM55_RS15165 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase DM55_RS15165 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase DM55_RS15165 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit DM55_RS15165 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS15165 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS15165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS15170 IPR002748 Cobalamin (vitamin B12) biosynthesis CbiD DM55_RS15175 IPR003723 Precorrin-6x reductase DM55_RS15185 IPR000878 Tetrapyrrole methylase DM55_RS15185 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site DM55_RS15185 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase DM55_RS15185 IPR014776 Tetrapyrrole methylase, subdomain 2 DM55_RS15185 IPR014777 Tetrapyrrole methylase, subdomain 1 DM55_RS15190 IPR003790 Protein of unknown function DUF187 DM55_RS15190 IPR013783 Immunoglobulin-like fold DM55_RS15190 IPR017853 Glycoside hydrolase, superfamily DM55_RS15195 IPR011701 Major facilitator superfamily DM55_RS15195 IPR020846 Major facilitator superfamily domain DM55_RS15200 IPR000835 MarR-type HTH domain DM55_RS15200 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS15200 IPR023187 Transcriptional regulator MarR-type, conserved site DM55_RS15205 IPR000709 Leu/Ile/Val-binding protein DM55_RS15205 IPR028081 Leucine-binding protein domain DM55_RS15205 IPR028082 Periplasmic binding protein-like I DM55_RS15210 IPR000835 MarR-type HTH domain DM55_RS15210 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS15215 IPR004045 Glutathione S-transferase, N-terminal DM55_RS15215 IPR004046 Glutathione S-transferase, C-terminal DM55_RS15215 IPR010987 Glutathione S-transferase, C-terminal-like DM55_RS15215 IPR012336 Thioredoxin-like fold DM55_RS15225 IPR000847 Transcription regulator HTH, LysR DM55_RS15225 IPR005119 LysR, substrate-binding DM55_RS15225 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS15230 IPR005624 Domain of unknown function DUF336 DM55_RS15235 IPR002347 Glucose/ribitol dehydrogenase DM55_RS15235 IPR016040 NAD(P)-binding domain DM55_RS15235 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS15240 IPR001048 Aspartate/glutamate/uridylate kinase DM55_RS15240 IPR003964 Carbamate kinase DM55_RS15245 IPR002292 Ornithine/putrescine carbamoyltransferase DM55_RS15245 IPR006130 Aspartate/ornithine carbamoyltransferase DM55_RS15245 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain DM55_RS15245 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding DM55_RS15245 IPR024904 Ornithine carbamoyltransferase DM55_RS15250 IPR003876 Arginine deiminase DM55_RS15250 IPR033199 DM55_RS15250 DM55_RS15255 IPR002293 Amino acid/polyamine transporter I DM55_RS15255 IPR004754 Amino acid antiporter DM55_RS15255 IPR022461 Arginine/ornithine antiporter DM55_RS15265 IPR000515 MetI-like domain DM55_RS15270 IPR003439 ABC transporter-like DM55_RS15270 IPR003593 AAA+ ATPase domain DM55_RS15270 IPR017871 ABC transporter, conserved site DM55_RS15270 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15275 IPR000515 MetI-like domain DM55_RS15280 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain DM55_RS15285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS15290 IPR011701 Major facilitator superfamily DM55_RS15290 IPR020846 Major facilitator superfamily domain DM55_RS15295 IPR000873 AMP-dependent synthetase/ligase DM55_RS15295 IPR020845 AMP-binding, conserved site DM55_RS15295 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS15300 IPR021945 Protein of unknown function DUF3562 DM55_RS15310 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS15310 IPR004090 Chemotaxis methyl-accepting receptor DM55_RS15310 IPR024478 4HB MCP domain DM55_RS15315 IPR002545 CheW-like protein DM55_RS15325 IPR003313 AraC-type arabinose-binding/dimerisation domain DM55_RS15325 IPR009057 Homeodomain-like DM55_RS15325 IPR018060 DNA binding HTH domain, AraC-type DM55_RS15325 IPR018062 HTH domain AraC-type, conserved site DM55_RS15330 IPR001702 Porin, Gram-negative type DM55_RS15330 IPR023614 Porin domain DM55_RS15340 IPR001031 Thioesterase DM55_RS15340 IPR009081 Acyl carrier protein-like DM55_RS15340 IPR020802 Polyketide synthase, thioesterase domain DM55_RS15340 IPR020806 Polyketide synthase, phosphopantetheine-binding domain DM55_RS15340 IPR029058 Alpha/Beta hydrolase fold DM55_RS15350 IPR005153 MbtH-like protein DM55_RS15355 IPR003347 JmjC domain DM55_RS15360 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS15360 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS15365 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site DM55_RS15365 IPR004839 Aminotransferase, class I/classII DM55_RS15365 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS15365 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS15365 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS15370 IPR001584 Integrase, catalytic core DM55_RS15370 IPR012337 Ribonuclease H-like domain DM55_RS15370 IPR025948 HTH-like domain DM55_RS15375 IPR001584 Integrase, catalytic core DM55_RS15375 IPR012337 Ribonuclease H-like domain DM55_RS15380 IPR007859 Electron transfer flavoprotein-ubiquinone oxidoreductase DM55_RS15380 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS15385 IPR002347 Glucose/ribitol dehydrogenase DM55_RS15385 IPR016040 NAD(P)-binding domain DM55_RS15385 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS15390 IPR029069 HotDog domain DM55_RS15400 IPR001547 Glycoside hydrolase, family 5 DM55_RS15400 IPR013781 Glycoside hydrolase, catalytic domain DM55_RS15400 IPR017853 Glycoside hydrolase, superfamily DM55_RS15405 IPR000014 PAS domain DM55_RS15405 IPR000792 Transcription regulator LuxR, C-terminal DM55_RS15405 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS15405 IPR016032 Signal transduction response regulator, C-terminal effector DM55_RS15410 IPR004163 Coenzyme A transferase binding site DM55_RS15410 IPR004165 Coenzyme A transferase family I DM55_RS15410 IPR012792 3-oxoacid CoA-transferase, subunit A DM55_RS15415 IPR004164 Coenzyme A transferase active site DM55_RS15415 IPR004165 Coenzyme A transferase family I DM55_RS15415 IPR012791 3-oxoacid CoA-transferase, subunit B DM55_RS15420 IPR002347 Glucose/ribitol dehydrogenase DM55_RS15420 IPR016040 NAD(P)-binding domain DM55_RS15425 IPR002509 Polysaccharide deacetylase DM55_RS15425 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DM55_RS15430 IPR009959 Polyketide cyclase SnoaL-like domain DM55_RS15430 IPR032710 DM55_RS15430 DM55_RS15435 IPR000847 Transcription regulator HTH, LysR DM55_RS15435 IPR005119 LysR, substrate-binding DM55_RS15435 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS15445 IPR000073 Alpha/beta hydrolase fold-1 DM55_RS15445 IPR029058 Alpha/Beta hydrolase fold DM55_RS15450 IPR006175 YjgF/Yer057p/UK114 family DM55_RS15450 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like DM55_RS15455 IPR002912 ACT domain DM55_RS15455 IPR003607 HD/PDEase domain DM55_RS15455 IPR004095 TGS DM55_RS15455 IPR004811 RelA/SpoT family DM55_RS15455 IPR007685 RelA/SpoT DM55_RS15455 IPR012675 Beta-grasp domain DM55_RS15455 IPR012676 TGS-like DM55_RS15465 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain DM55_RS15465 IPR002320 Threonine-tRNA ligase, class IIa DM55_RS15465 IPR004095 TGS DM55_RS15465 IPR004154 Anticodon-binding DM55_RS15465 IPR012675 Beta-grasp domain DM55_RS15465 IPR012676 TGS-like DM55_RS15465 IPR012947 Threonyl/alanyl tRNA synthetase, SAD DM55_RS15465 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain DM55_RS15470 IPR001288 Translation initiation factor 3 DM55_RS15470 IPR019813 Translation initiation factor 3, conserved site DM55_RS15470 IPR019814 Translation initiation factor 3, N-terminal DM55_RS15470 IPR019815 Translation initiation factor 3, C-terminal DM55_RS15475 IPR001706 Ribosomal protein L35, non-mitochondrial DM55_RS15475 IPR018265 Ribosomal protein L35, conserved site DM55_RS15475 IPR021137 Ribosomal protein L35 DM55_RS15480 IPR005813 Ribosomal protein L20 DM55_RS15485 IPR002319 Phenylalanyl-tRNA synthetase DM55_RS15485 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal DM55_RS15485 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit DM55_RS15485 IPR010978 tRNA-binding arm DM55_RS15485 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial DM55_RS15490 IPR002547 tRNA-binding domain DM55_RS15490 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit DM55_RS15490 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding DM55_RS15490 IPR005146 B3/B4 tRNA-binding domain DM55_RS15490 IPR005147 tRNA synthetase, B5-domain DM55_RS15490 IPR009061 DNA binding domain, putative DM55_RS15490 IPR012340 Nucleic acid-binding, OB-fold DM55_RS15490 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 DM55_RS15495 IPR000119 Histone-like bacterial DNA-binding protein DM55_RS15495 IPR005684 Integration host factor, alpha subunit DM55_RS15495 IPR010992 Integration host factor (IHF)-like DNA-binding domain DM55_RS15495 IPR020816 Histone-like DNA-binding protein, conserved site DM55_RS15500 IPR000551 MerR-type HTH domain DM55_RS15500 IPR009061 DNA binding domain, putative DM55_RS15515 IPR021847 Protein of unknown function DUF3443 DM55_RS15520 IPR021267 Protein of unknown function DUF2844 DM55_RS15525 IPR010653 Lipoprotein, NlpB DM55_RS15530 IPR025668 Transposase DDE domain DM55_RS15545 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS15550 IPR007138 Antibiotic biosynthesis monooxygenase-like domain DM55_RS15550 IPR011008 Dimeric alpha-beta barrel DM55_RS15565 IPR003848 Domain of unknown function DUF218 DM55_RS15565 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS15580 IPR025161 Putative transposase IS4/IS5 family DM55_RS15585 IPR000847 Transcription regulator HTH, LysR DM55_RS15585 IPR005119 LysR, substrate-binding DM55_RS15585 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS15590 IPR005234 Chromosome segregation/condensation protein ScpB DM55_RS15590 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS15595 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F DM55_RS15595 IPR002942 RNA-binding S4 domain DM55_RS15595 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F DM55_RS15595 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site DM55_RS15595 IPR020103 Pseudouridine synthase, catalytic domain DM55_RS15600 IPR003728 Ribosome maturation factor RimP DM55_RS15600 IPR028989 Ribosome maturation factor RimP, N-terminal DM55_RS15600 IPR028998 Ribosome maturation factor RimP, C-terminal DM55_RS15605 IPR003029 Ribosomal protein S1, RNA-binding domain DM55_RS15605 IPR004087 K Homology domain DM55_RS15605 IPR009019 K homology domain, prokaryotic type DM55_RS15605 IPR010213 Transcription termination factor NusA DM55_RS15605 IPR010214 Transcription termination factor NusA, C-terminal duplication DM55_RS15605 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical DM55_RS15605 IPR012340 Nucleic acid-binding, OB-fold DM55_RS15605 IPR013735 Transcription factor NusA, N-terminal DM55_RS15605 IPR015946 K homology domain-like, alpha/beta DM55_RS15605 IPR022967 RNA-binding domain, S1 DM55_RS15605 IPR025249 KH domain, NusA-like DM55_RS15605 IPR030842 DM55_RS15605 DM55_RS15610 IPR000178 Translation initiation factor aIF-2, bacterial-like DM55_RS15610 IPR005225 Small GTP-binding protein domain DM55_RS15610 IPR006847 Translation initiation factor IF-2, N-terminal DM55_RS15610 IPR009000 Translation protein, beta-barrel domain DM55_RS15610 IPR009061 DNA binding domain, putative DM55_RS15610 IPR013575 Initiation factor 2 associated domain, bacterial DM55_RS15610 IPR023115 Translation initiation factor IF- 2, domain 3 DM55_RS15610 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15615 IPR000238 Ribosome-binding factor A DM55_RS15615 IPR015946 K homology domain-like, alpha/beta DM55_RS15615 IPR023799 Ribosome-binding factor A domain DM55_RS15620 IPR002501 Pseudouridine synthase II DM55_RS15620 IPR014780 tRNA pseudouridine synthase II, TruB DM55_RS15620 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal DM55_RS15620 IPR015947 PUA-like domain DM55_RS15620 IPR020103 Pseudouridine synthase, catalytic domain DM55_RS15620 IPR032819 DM55_RS15620 DM55_RS15625 IPR004638 Drug resistance transporter EmrB/QacA subfamily DM55_RS15625 IPR011701 Major facilitator superfamily DM55_RS15625 IPR020846 Major facilitator superfamily domain DM55_RS15630 IPR006143 RND efflux pump, membrane fusion protein DM55_RS15630 IPR032317 DM55_RS15630 DM55_RS15635 IPR003423 Outer membrane efflux protein DM55_RS15635 IPR010131 RND efflux system, outer membrane lipoprotein, NodT DM55_RS15640 IPR000835 MarR-type HTH domain DM55_RS15640 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS15645 IPR000640 Translation elongation factor EFG, V domain DM55_RS15645 IPR000795 Elongation factor, GTP-binding domain DM55_RS15645 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 DM55_RS15645 IPR005225 Small GTP-binding protein domain DM55_RS15645 IPR006298 GTP-binding protein TypA DM55_RS15645 IPR009000 Translation protein, beta-barrel domain DM55_RS15645 IPR009022 Elongation factor G, III-V domain DM55_RS15645 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15645 IPR031157 DM55_RS15645 DM55_RS15650 IPR001017 Dehydrogenase, E1 component DM55_RS15650 IPR005475 Transketolase-like, pyrimidine-binding domain DM55_RS15650 IPR011603 2-oxoglutarate dehydrogenase E1 component DM55_RS15650 IPR029061 Thiamin diphosphate-binding fold DM55_RS15650 IPR031717 DM55_RS15650 DM55_RS15650 IPR032106 DM55_RS15650 DM55_RS15655 IPR000089 Biotin/lipoyl attachment DM55_RS15655 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain DM55_RS15655 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site DM55_RS15655 IPR004167 E3 binding DM55_RS15655 IPR006255 Dihydrolipoamide succinyltransferase DM55_RS15655 IPR011053 Single hybrid motif DM55_RS15655 IPR023213 Chloramphenicol acetyltransferase-like domain DM55_RS15660 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DM55_RS15660 IPR006258 Dihydrolipoamide dehydrogenase DM55_RS15660 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site DM55_RS15660 IPR016156 FAD/NAD-linked reductase, dimerisation domain DM55_RS15660 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS15665 IPR005654 ATPase, AFG1-like DM55_RS15665 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15670 IPR025161 Putative transposase IS4/IS5 family DM55_RS15675 IPR019223 Domain of unknown function DUF2147 DM55_RS15680 IPR013686 Polypeptide-transport-associated, ShlB-type DM55_RS15685 IPR031929 DM55_RS15685 DM55_RS15690 IPR031929 DM55_RS15690 DM55_RS15695 IPR001584 Integrase, catalytic core DM55_RS15695 IPR012337 Ribonuclease H-like domain DM55_RS15695 IPR025948 HTH-like domain DM55_RS15700 IPR002514 Transposase IS3/IS911family DM55_RS15700 IPR009057 Homeodomain-like DM55_RS15705 IPR003696 Carbamoyltransferase DM55_RS15705 IPR031730 DM55_RS15705 DM55_RS15710 IPR002692 Penicillin amidase-like DM55_RS15710 IPR014395 Penicillin/cephalosporin acylase DM55_RS15710 IPR023343 Penicillin amidase type, domain1 DM55_RS15710 IPR029055 Nucleophile aminohydrolases, N-terminal DM55_RS15720 IPR000683 Oxidoreductase, N-terminal DM55_RS15720 IPR016040 NAD(P)-binding domain DM55_RS15725 IPR000524 Transcription regulator HTH, GntR DM55_RS15725 IPR008920 Transcription regulator FadR/GntR, C-terminal DM55_RS15725 IPR011711 GntR, C-terminal DM55_RS15725 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS15730 IPR001584 Integrase, catalytic core DM55_RS15730 IPR012337 Ribonuclease H-like domain DM55_RS15730 IPR025948 HTH-like domain DM55_RS15735 IPR002514 Transposase IS3/IS911family DM55_RS15735 IPR009057 Homeodomain-like DM55_RS15740 IPR004788 Ribose 5-phosphate isomerase, type A DM55_RS15740 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup DM55_RS15745 IPR002477 Peptidoglycan binding-like DM55_RS15745 IPR002502 N-acetylmuramoyl-L-alanine amidase domain DM55_RS15755 IPR001537 tRNA/rRNA methyltransferase, SpoU type DM55_RS15755 IPR004441 RNA methyltransferase TrmH family DM55_RS15755 IPR013123 RNA 2-O ribose methyltransferase, substrate binding DM55_RS15755 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB DM55_RS15755 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DM55_RS15755 IPR029028 Alpha/beta knot methyltransferases DM55_RS15755 IPR029064 50S ribosomal protein L30e-like DM55_RS15760 IPR003029 Ribosomal protein S1, RNA-binding domain DM55_RS15760 IPR004476 Ribonuclease II/ribonuclease R DM55_RS15760 IPR011129 Cold shock protein DM55_RS15760 IPR011805 Ribonuclease R DM55_RS15760 IPR012340 Nucleic acid-binding, OB-fold DM55_RS15760 IPR013223 Ribonuclease B, N-terminal OB domain DM55_RS15760 IPR022966 Ribonuclease II/R, conserved site DM55_RS15760 IPR022967 RNA-binding domain, S1 DM55_RS15770 IPR008490 Transposase InsH, N-terminal DM55_RS15770 IPR025668 Transposase DDE domain DM55_RS15780 IPR003660 HAMP linker domain DM55_RS15780 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain DM55_RS15785 IPR007312 Phosphoesterase DM55_RS15785 IPR017850 Alkaline-phosphatase-like, core domain DM55_RS15790 IPR003137 Protease-associated domain, PA DM55_RS15795 IPR001902 Sulphate anion transporter DM55_RS15795 IPR002645 STAS domain DM55_RS15795 IPR011547 Sulphate transporter DM55_RS15800 IPR003115 ParB/Sulfiredoxin DM55_RS15800 IPR014956 Putative ParB-like nuclease DM55_RS15800 IPR016932 Uncharacterised conserved protein UCP029669 DM55_RS15805 IPR000182 GNAT domain DM55_RS15805 IPR016181 Acyl-CoA N-acyltransferase DM55_RS15815 IPR005828 General substrate transporter DM55_RS15815 IPR005829 Sugar transporter, conserved site DM55_RS15815 IPR011701 Major facilitator superfamily DM55_RS15815 IPR020846 Major facilitator superfamily domain DM55_RS15820 IPR001647 DNA-binding HTH domain, TetR-type DM55_RS15820 IPR009057 Homeodomain-like DM55_RS15820 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DM55_RS15820 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal DM55_RS15820 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DM55_RS15825 IPR000873 AMP-dependent synthetase/ligase DM55_RS15825 IPR020845 AMP-binding, conserved site DM55_RS15825 IPR025110 AMP-binding enzyme C-terminal domain DM55_RS15830 IPR011465 Protein of unknown function DUF1571 DM55_RS15835 IPR024446 DM55_RS15835 DM55_RS15840 IPR005001 Host factor Hfq DM55_RS15840 IPR010920 Like-Sm (LSM) domain DM55_RS15845 IPR021350 Protein of unknown function DUF2968 DM55_RS15850 IPR002078 RNA polymerase sigma factor 54 interaction domain DM55_RS15850 IPR002197 DNA binding HTH domain, Fis-type DM55_RS15850 IPR003593 AAA+ ATPase domain DM55_RS15850 IPR009057 Homeodomain-like DM55_RS15850 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DM55_RS15850 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DM55_RS15850 IPR025944 Sigma-54 interaction domain, conserved site DM55_RS15850 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15855 IPR018705 Domain of unknown function DUF2134, membrane DM55_RS15860 IPR022053 Protein of unknown function DUF3613 DM55_RS15865 IPR011990 Tetratricopeptide-like helical domain DM55_RS15865 IPR016931 Uncharacterised conserved protein UCP029658, TPR DM55_RS15865 IPR019734 Tetratricopeptide repeat DM55_RS15870 IPR018076 Type II secretion system F domain DM55_RS15875 IPR018076 Type II secretion system F domain DM55_RS15885 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15885 IPR031580 DM55_RS15885 DM55_RS15890 IPR001775 GspD/PilQ family DM55_RS15890 IPR004846 Type II/III secretion system DM55_RS15890 IPR032789 DM55_RS15890 DM55_RS15895 IPR013974 SAF domain DM55_RS15895 IPR017592 Pilus assembly, Flp-type CpaB DM55_RS15895 IPR031571 DM55_RS15895 DM55_RS15900 IPR012495 TadE-like DM55_RS15905 IPR000045 Prepilin type IV endopeptidase, peptidase domain DM55_RS15905 IPR014032 Peptidase A24A, prepilin type IV, bacterial DM55_RS15910 IPR007047 Flp/Fap pilin component DM55_RS15915 IPR001584 Integrase, catalytic core DM55_RS15915 IPR012337 Ribonuclease H-like domain DM55_RS15915 IPR025948 HTH-like domain DM55_RS15920 IPR002514 Transposase IS3/IS911family DM55_RS15920 IPR009057 Homeodomain-like DM55_RS15930 IPR000515 MetI-like domain DM55_RS15935 IPR000515 MetI-like domain DM55_RS15940 IPR003439 ABC transporter-like DM55_RS15940 IPR003593 AAA+ ATPase domain DM55_RS15940 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit DM55_RS15940 IPR008995 Molybdate/tungstate binding, C-terminal DM55_RS15940 IPR013611 Transport-associated OB, type 2 DM55_RS15940 IPR017871 ABC transporter, conserved site DM55_RS15940 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15945 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein DM55_RS15950 IPR001046 NRAMP family DM55_RS15955 IPR010710 Protein of unknown function DUF1289 DM55_RS15960 IPR005618 Outer membrane protein, OmpW DM55_RS15960 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel DM55_RS15965 IPR004136 2-nitropropane dioxygenase, NPD DM55_RS15965 IPR013785 Aldolase-type TIM barrel DM55_RS15970 IPR015590 Aldehyde dehydrogenase domain DM55_RS15970 IPR016161 Aldehyde/histidinol dehydrogenase DM55_RS15970 IPR016162 Aldehyde dehydrogenase, N-terminal DM55_RS15970 IPR016163 Aldehyde dehydrogenase, C-terminal DM55_RS15970 IPR029510 Aldehyde dehydrogenase, glutamic acid active site DM55_RS15980 IPR003439 ABC transporter-like DM55_RS15980 IPR003593 AAA+ ATPase domain DM55_RS15980 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15980 IPR032781 DM55_RS15980 DM55_RS15985 IPR007844 AsmA DM55_RS15990 IPR003439 ABC transporter-like DM55_RS15990 IPR003593 AAA+ ATPase domain DM55_RS15990 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS15995 IPR005226 UPF0014 family DM55_RS16005 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like DM55_RS16005 IPR023190 Phosphoserine phosphatase, domain 2 DM55_RS16005 IPR023214 HAD-like domain DM55_RS16005 IPR025138 Domain of unknown function DUF4072 DM55_RS16010 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme DM55_RS16010 IPR006233 Cystathionine beta-lyase, bacterial DM55_RS16010 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS16010 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS16010 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS16020 IPR002155 Thiolase DM55_RS16020 IPR016039 Thiolase-like DM55_RS16020 IPR020610 Thiolase, active site DM55_RS16020 IPR020615 Thiolase, acyl-enzyme intermediate active site DM55_RS16020 IPR020616 Thiolase, N-terminal DM55_RS16020 IPR020617 Thiolase, C-terminal DM55_RS16025 IPR011611 Carbohydrate kinase PfkB DM55_RS16025 IPR029056 Ribokinase-like DM55_RS16030 IPR002792 TRAM domain DM55_RS16030 IPR005839 Methylthiotransferase DM55_RS16030 IPR005840 Ribosomal protein S12 methylthiotransferase RimO DM55_RS16030 IPR006638 Elongator protein 3/MiaB/NifB DM55_RS16030 IPR007197 Radical SAM DM55_RS16030 IPR012340 Nucleic acid-binding, OB-fold DM55_RS16030 IPR013848 Methylthiotransferase, N-terminal DM55_RS16030 IPR020612 Methylthiotransferase, conserved site DM55_RS16030 IPR023404 Radical SAM, alpha/beta horseshoe DM55_RS16030 IPR023970 Methylthiotransferase/radical SAM-type protein DM55_RS16035 IPR007897 PHB accumulation regulatory DM55_RS16035 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR DM55_RS16035 IPR012909 PHA accumulation regulator DNA-binding, N-terminal DM55_RS16040 IPR002347 Glucose/ribitol dehydrogenase DM55_RS16040 IPR011283 Acetoacetyl-CoA reductase DM55_RS16040 IPR016040 NAD(P)-binding domain DM55_RS16040 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS16045 IPR002155 Thiolase DM55_RS16045 IPR016039 Thiolase-like DM55_RS16045 IPR020610 Thiolase, active site DM55_RS16045 IPR020613 Thiolase, conserved site DM55_RS16045 IPR020615 Thiolase, acyl-enzyme intermediate active site DM55_RS16045 IPR020616 Thiolase, N-terminal DM55_RS16045 IPR020617 Thiolase, C-terminal DM55_RS16050 IPR010941 Poly-beta-hydroxybutyrate polymerase, central domain DM55_RS16050 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I DM55_RS16050 IPR029058 Alpha/Beta hydrolase fold DM55_RS16055 IPR003730 Multi-copper polyphenol oxidoreductase, laccase DM55_RS16055 IPR011324 Cytotoxic necrotizing factor-like, catalytic DM55_RS16060 IPR002942 RNA-binding S4 domain DM55_RS16060 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F DM55_RS16060 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site DM55_RS16060 IPR006225 Pseudouridine synthase, RluC/RluD DM55_RS16060 IPR020103 Pseudouridine synthase, catalytic domain DM55_RS16065 IPR011990 Tetratricopeptide-like helical domain DM55_RS16065 IPR017689 Outer membrane protein assembly factor BamD DM55_RS16070 IPR006555 ATP-dependent helicase, C-terminal DM55_RS16070 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16075 IPR007420 Protein of unknown function DUF465 DM55_RS16085 IPR003029 Ribosomal protein S1, RNA-binding domain DM55_RS16085 IPR006641 YqgF/RNase H-like domain DM55_RS16085 IPR010994 RuvA domain 2-like DM55_RS16085 IPR012337 Ribonuclease H-like domain DM55_RS16085 IPR012340 Nucleic acid-binding, OB-fold DM55_RS16085 IPR018974 Tex-like protein, N-terminal DM55_RS16085 IPR022967 RNA-binding domain, S1 DM55_RS16085 IPR023097 Tex RuvX-like domain DM55_RS16085 IPR023319 Tex-like protein, HTH domain DM55_RS16085 IPR023323 Tex-like domain DM55_RS16085 IPR032639 DM55_RS16085 DM55_RS16090 IPR003855 K+ potassium transporter DM55_RS16090 IPR023051 Potassium uptake protein, low affinity, Kup DM55_RS16095 IPR000836 Phosphoribosyltransferase domain DM55_RS16095 IPR029057 Phosphoribosyltransferase-like DM55_RS16100 IPR001114 Adenylosuccinate synthetase DM55_RS16100 IPR018220 Adenylosuccinate synthase, active site DM55_RS16100 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16100 IPR033128 DM55_RS16100 DM55_RS16105 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit DM55_RS16105 IPR004517 ATP phosphoribosyltransferase regulatory subunit DM55_RS16110 IPR019201 Protein of unknown function DUF2065 DM55_RS16115 IPR001107 Band 7 protein DM55_RS16115 IPR001972 Stomatin family DM55_RS16115 IPR010200 HflC DM55_RS16120 IPR001107 Band 7 protein DM55_RS16120 IPR001972 Stomatin family DM55_RS16120 IPR010201 HflK DM55_RS16120 IPR020980 Menbrane protein HflK, N-terminal DM55_RS16125 IPR006073 GTP binding domain DM55_RS16125 IPR016496 GTPase HflX DM55_RS16125 IPR025121 GTPase HflX N-terminal domain DM55_RS16125 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16125 IPR032305 DM55_RS16125 DM55_RS16130 IPR005001 Host factor Hfq DM55_RS16130 IPR010920 Like-Sm (LSM) domain DM55_RS16135 IPR003593 AAA+ ATPase domain DM55_RS16135 IPR005225 Small GTP-binding protein domain DM55_RS16135 IPR006073 GTP binding domain DM55_RS16135 IPR015946 K homology domain-like, alpha/beta DM55_RS16135 IPR016484 GTP-binding protein EngA DM55_RS16135 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16135 IPR032859 DM55_RS16135 DM55_RS16140 IPR002372 Pyrrolo-quinoline quinone repeat DM55_RS16140 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily DM55_RS16140 IPR017687 Outer membrane protein assembly factor BamB DM55_RS16140 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat DM55_RS16140 IPR027295 Quinonprotein alcohol dehydrogenase-like domain DM55_RS16145 IPR018704 Domain of unknown function DUF09976 DM55_RS16145 IPR026039 Uncharacterised protein family UPF0070 DM55_RS16150 IPR004154 Anticodon-binding DM55_RS16150 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit DM55_RS16150 IPR015807 Histidine-tRNA ligase DM55_RS16155 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type DM55_RS16155 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial DM55_RS16160 IPR001387 Cro/C1-type helix-turn-helix domain DM55_RS16160 IPR010982 Lambda repressor-like, DNA-binding domain DM55_RS16160 IPR025194 Domain of unknown function DUF4115 DM55_RS16165 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr DM55_RS16165 IPR007197 Radical SAM DM55_RS16165 IPR013785 Aldolase-type TIM barrel DM55_RS16165 IPR027492 Dual-specificity RNA methyltransferase RlmN DM55_RS16170 IPR001564 Nucleoside diphosphate kinase DM55_RS16170 IPR023005 Nucleoside diphosphate kinase, active site DM55_RS16175 IPR006214 Bax inhibitor 1-related DM55_RS16180 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD DM55_RS16180 IPR010280 (Uracil-5)-methyltransferase family DM55_RS16180 IPR012340 Nucleic acid-binding, OB-fold DM55_RS16180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS16180 IPR030391 DM55_RS16180 DM55_RS16185 IPR005135 Endonuclease/exonuclease/phosphatase DM55_RS16195 IPR012337 Ribonuclease H-like domain DM55_RS16195 IPR019288 Predicted 3'-5' exonuclease, PolB-like DM55_RS16200 IPR000943 RNA polymerase sigma-70 DM55_RS16200 IPR007624 RNA polymerase sigma-70 region 3 DM55_RS16200 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS16200 IPR007630 RNA polymerase sigma-70 region 4 DM55_RS16200 IPR009042 RNA polymerase sigma-70 region 1.2 DM55_RS16200 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS16200 IPR012761 RNA polymerase sigma factor RpoS DM55_RS16200 IPR013324 RNA polymerase sigma factor, region 3/4 DM55_RS16200 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS16200 IPR014284 RNA polymerase sigma-70 like domain DM55_RS16205 IPR011055 Duplicated hybrid motif DM55_RS16205 IPR016047 Peptidase M23 DM55_RS16205 IPR018392 LysM domain DM55_RS16210 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase DM55_RS16210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS16215 IPR002828 Survival protein SurE-like phosphatase/nucleotidase DM55_RS16215 IPR030048 DM55_RS16215 DM55_RS16245 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DM55_RS16245 IPR022754 DNA polymerase III, gamma subunit, domain III DM55_RS16300 IPR002528 Multi antimicrobial extrusion protein DM55_RS16355 IPR002509 Polysaccharide deacetylase DM55_RS16355 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel DM55_RS16445 IPR003959 ATPase, AAA-type, core DM55_RS16445 IPR014555 RecF-like DM55_RS16445 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS16520 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal DM55_RS16520 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding DM55_RS16520 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like DM55_RS16520 IPR013328 Dehydrogenase, multihelical DM55_RS16520 IPR016040 NAD(P)-binding domain DM55_RS16520 IPR022694 3-hydroxyacyl-CoA dehydrogenase DM55_RS16550 IPR010918 AIR synthase-related protein, C-terminal domain DM55_RS16550 IPR029062 Class I glutamine amidotransferase-like DM55_RS16585 IPR001672 Phosphoglucose isomerase (PGI) DM55_RS16715 IPR000515 MetI-like domain DM55_RS16715 IPR005667 Sulphate ABC transporter permease protein 2 DM55_RS16720 IPR000515 MetI-like domain DM55_RS16720 IPR005667 Sulphate ABC transporter permease protein 2 DM55_RS16720 IPR011865 Sulphate ABC transporter, permease protein CysT DM55_RS16825 IPR014917 Protein of unknown function DUF1800 DM55_RS16865 IPR003711 CarD-like/TRCF domain DM55_RS16865 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS17085 IPR000184 Bacterial surface antigen (D15) DM55_RS17110 IPR001865 Ribosomal protein S2 DM55_RS17110 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid DM55_RS17110 IPR023591 Ribosomal protein S2, flavodoxin-like domain DM55_RS17115 IPR001865 Ribosomal protein S2 DM55_RS17115 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid DM55_RS17115 IPR023591 Ribosomal protein S2, flavodoxin-like domain DM55_RS17175 IPR010935 SMCs flexible hinge DM55_RS17175 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS17190 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family DM55_RS17190 IPR011004 Trimeric LpxA-like DM55_RS17255 IPR015003 Protein of unknown function DUF1853 DM55_RS17365 IPR000914 Bacterial extracellular solute-binding protein, family 5 DM55_RS17420 IPR000994 Peptidase M24, structural domain DM55_RS17420 IPR001714 Peptidase M24, methionine aminopeptidase DM55_RS17420 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 DM55_RS17535 IPR001242 Condensation domain DM55_RS17540 IPR001242 Condensation domain DM55_RS17590 IPR001036 Acriflavin resistance protein DM55_RS17610 IPR005546 Autotransporter beta-domain DM55_RS17630 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS17730 IPR002220 DapA-like DM55_RS17730 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA DM55_RS17730 IPR013785 Aldolase-type TIM barrel DM55_RS17730 IPR020625 Dihydrodipicolinate synthetase, active site DM55_RS17785 IPR004468 CTP synthase DM55_RS17785 IPR017456 CTP synthase, N-terminal DM55_RS17785 IPR017926 Glutamine amidotransferase DM55_RS17785 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS17785 IPR029062 Class I glutamine amidotransferase-like DM55_RS17980 IPR002606 Riboflavin kinase, bacterial DM55_RS17980 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS17980 IPR015864 FAD synthetase DM55_RS17980 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic DM55_RS17980 IPR023465 Riboflavin kinase domain DM55_RS17980 IPR023468 Riboflavin kinase DM55_RS17995 IPR002300 Aminoacyl-tRNA synthetase, class Ia DM55_RS17995 IPR002301 Isoleucine-tRNA ligase DM55_RS17995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DM55_RS18215 IPR000719 Protein kinase domain DM55_RS18215 IPR008271 Serine/threonine-protein kinase, active site DM55_RS18215 IPR011009 Protein kinase-like domain DM55_RS18250 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain DM55_RS18440 IPR003959 ATPase, AAA-type, core DM55_RS18440 IPR004491 Heat shock protein HslU DM55_RS18440 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS18555 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal DM55_RS18700 IPR000914 Bacterial extracellular solute-binding protein, family 5 DM55_RS18700 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site DM55_RS18715 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DM55_RS18730 IPR002816 Pheromone shutdown, TraB DM55_RS18775 IPR002646 Poly A polymerase, head domain DM55_RS18775 IPR032828 DM55_RS18775 DM55_RS18805 IPR005648 Flagellar hook capping protein DM55_RS18865 IPR006043 Xanthine/uracil/vitamin C permease DM55_RS18975 IPR021647 Copper binding periplasmic protein CusF DM55_RS19030 IPR008928 Six-hairpin glycosidase-like DM55_RS19030 IPR012341 Six-hairpin glycosidase DM55_RS19045 IPR016833 Putative sodium bile acid cotransporter DM55_RS19130 IPR001279 Beta-lactamase-like DM55_RS19185 IPR004721 Dihydroorotase homodimeric type DM55_RS19185 IPR006680 Amidohydrolase 1 DM55_RS19185 IPR032466 DM55_RS19185 DM55_RS19480 IPR012340 Nucleic acid-binding, OB-fold DM55_RS19560 IPR000788 Ribonucleotide reductase large subunit, C-terminal DM55_RS19560 IPR005144 ATP-cone DM55_RS19560 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal DM55_RS19560 IPR013509 Ribonucleotide reductase large subunit, N-terminal DM55_RS19580 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain DM55_RS19580 IPR004780 Signal recognition particle protein Ffh DM55_RS19580 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS19660 IPR020937 SecA conserved site DM55_RS19660 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS19680 IPR012336 Thioredoxin-like fold DM55_RS19680 IPR013740 Redoxin DM55_RS19755 IPR023614 Porin domain DM55_RS19920 IPR000847 Transcription regulator HTH, LysR DM55_RS19920 IPR005119 LysR, substrate-binding DM55_RS19920 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS19940 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain DM55_RS19940 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain DM55_RS19940 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal DM55_RS19955 IPR001991 Sodium:dicarboxylate symporter DM55_RS20165 IPR013126 Heat shock protein 70 family DM55_RS20205 IPR002052 DNA methylase, N-6 adenine-specific, conserved site DM55_RS20205 IPR007848 Methyltransferase small domain DM55_RS20205 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS20225 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DM55_RS20225 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal DM55_RS20495 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase DM55_RS20495 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS20495 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS20500 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal DM55_RS20500 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DM55_RS20500 IPR016039 Thiolase-like DM55_RS20530 IPR007312 Phosphoesterase DM55_RS20530 IPR017768 Acid phosphatase, AcpA DM55_RS20530 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha DM55_RS20530 IPR017850 Alkaline-phosphatase-like, core domain DM55_RS20625 IPR006076 FAD dependent oxidoreductase DM55_RS20625 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal DM55_RS20625 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain DM55_RS20675 IPR001273 Aromatic amino acid hydroxylase DM55_RS20675 IPR019774 Aromatic amino acid hydroxylase, C-terminal DM55_RS20680 IPR000485 AsnC-type HTH domain DM55_RS20680 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS20680 IPR019887 Transcription regulator AsnC-type, C-terminal DM55_RS20680 IPR019888 Transcription regulator AsnC-type DM55_RS20725 IPR028081 Leucine-binding protein domain DM55_RS20725 IPR028082 Periplasmic binding protein-like I DM55_RS20735 IPR001851 ABC transporter, permease DM55_RS21055 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain DM55_RS21055 IPR008965 Carbohydrate-binding domain DM55_RS21055 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain DM55_RS21225 IPR005804 Fatty acid desaturase, type 1 DM55_RS21300 IPR000891 Pyruvate carboxyltransferase DM55_RS21300 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site DM55_RS21300 IPR013785 Aldolase-type TIM barrel DM55_RS21345 IPR007419 BFD-like [2Fe-2S]-binding domain DM55_RS21380 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site DM55_RS21380 IPR004839 Aminotransferase, class I/classII DM55_RS21380 IPR005861 Histidinol-phosphate aminotransferase family DM55_RS21380 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 DM55_RS21380 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 DM55_RS21380 IPR015424 Pyridoxal phosphate-dependent transferase DM55_RS21395 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase DM55_RS21395 IPR006204 GHMP kinase N-terminal domain DM55_RS21395 IPR013750 GHMP kinase, C-terminal domain DM55_RS21395 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DM55_RS21395 IPR020568 Ribosomal protein S5 domain 2-type fold DM55_RS21415 IPR000445 Helix-hairpin-helix motif DM55_RS21415 IPR003265 HhH-GPD domain DM55_RS21415 IPR004036 Endonuclease III-like, conserved site-2 DM55_RS21415 IPR005760 A/G-specific adenine glycosylase MutY DM55_RS21415 IPR011257 DNA glycosylase DM55_RS21415 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal DM55_RS21465 IPR006153 Cation/H+ exchanger DM55_RS21490 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS21555 IPR010628 Ethanolamine ammonia lyase large subunit DM55_RS21710 IPR007812 Type II secretion system protein L DM55_RS21710 IPR024230 GspL, cytoplasmic actin-ATPase-like domain DM55_RS21820 IPR016039 Thiolase-like DM55_RS22025 IPR001775 GspD/PilQ family DM55_RS22025 IPR004846 Type II/III secretion system DM55_RS22025 IPR005644 NolW-like DM55_RS22025 IPR011662 Secretin/TonB, short N-terminal DM55_RS22025 IPR013355 Type IV pilus secretin PilQ DM55_RS22060 IPR001460 Penicillin-binding protein, transpeptidase DM55_RS22060 IPR012338 Beta-lactamase/transpeptidase-like DM55_RS22080 IPR001584 Integrase, catalytic core DM55_RS22080 IPR012337 Ribonuclease H-like domain DM55_RS22170 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 DM55_RS22170 IPR004589 DNA helicase, ATP-dependent, RecQ type DM55_RS22170 IPR011545 DEAD/DEAH box helicase domain DM55_RS22170 IPR014001 Helicase, superfamily 1/2, ATP-binding domain DM55_RS22170 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS22275 IPR003834 Cytochrome c assembly protein, transmembrane domain DM55_RS22275 IPR012336 Thioredoxin-like fold DM55_RS22275 IPR017937 Thioredoxin, conserved site DM55_RS22275 IPR022910 Thiol:disulphide interchange protein DsbD DM55_RS22275 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain DM55_RS22385 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding DM55_RS22385 IPR029061 Thiamin diphosphate-binding fold DM55_RS22455 IPR002744 Domain of unknown function DUF59 DM55_RS22735 IPR002932 Glutamate synthase domain DM55_RS22735 IPR013785 Aldolase-type TIM barrel DM55_RS22860 IPR002510 TldD/PmbA DM55_RS23170 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS23255 IPR000943 RNA polymerase sigma-70 DM55_RS23255 IPR007624 RNA polymerase sigma-70 region 3 DM55_RS23255 IPR007627 RNA polymerase sigma-70 region 2 DM55_RS23255 IPR009042 RNA polymerase sigma-70 region 1.2 DM55_RS23255 IPR011991 Winged helix-turn-helix DNA-binding domain DM55_RS23255 IPR013324 RNA polymerase sigma factor, region 3/4 DM55_RS23255 IPR013325 RNA polymerase sigma factor, region 2 DM55_RS23255 IPR014284 RNA polymerase sigma-70 like domain DM55_RS23385 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p DM55_RS23385 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site DM55_RS23385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like DM55_RS23445 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic DM55_RS23445 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site DM55_RS23445 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E DM55_RS23490 IPR011701 Major facilitator superfamily DM55_RS23490 IPR020846 Major facilitator superfamily domain DM55_RS23725 IPR003714 PhoH-like protein DM55_RS23725 IPR027417 P-loop containing nucleoside triphosphate hydrolase DM55_RS24005 IPR008407 Branched-chain amino acid transport, AzlD DM55_RS24010 IPR001576 Phosphoglycerate kinase DM55_RS24010 IPR015824 Phosphoglycerate kinase, N-terminal DM55_RS24010 IPR015911 Phosphoglycerate kinase, conserved site DM55_RS24025 IPR000771 Ketose-bisphosphate aldolase, class-II DM55_RS24025 IPR013785 Aldolase-type TIM barrel DM55_RS24280 IPR020846 Major facilitator superfamily domain DM55_RS24415 IPR002347 Glucose/ribitol dehydrogenase DM55_RS24415 IPR016040 NAD(P)-binding domain DM55_RS24415 IPR020904 Short-chain dehydrogenase/reductase, conserved site DM55_RS24550 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase DM55_RS24550 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal DM55_RS24610 IPR011697 Peptidase C26 DM55_RS24625 IPR005828 General substrate transporter DM55_RS24625 IPR005829 Sugar transporter, conserved site DM55_RS24625 IPR020846 Major facilitator superfamily domain DM55_RS24670 IPR001041 2Fe-2S ferredoxin-type domain DM55_RS24670 IPR006656 Molybdopterin oxidoreductase DM55_RS24670 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain DM55_RS24670 IPR012675 Beta-grasp domain DM55_RS24670 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DM55_RS24670 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DM55_RS24670 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding DM55_RS24830 IPR000286 Histone deacetylase superfamily DM55_RS24830 IPR023801 Histone deacetylase domain DM55_RS25050 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain DM55_RS25050 IPR016040 NAD(P)-binding domain DM55_RS25050 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DM55_RS25090 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G DM55_RS25135 IPR002347 Glucose/ribitol dehydrogenase DM55_RS25135 IPR016040 NAD(P)-binding domain DM55_RS25135 IPR020904 Short-chain dehydrogenase/reductase, conserved site