locus-tag	class	description
NW94_RS00010	COG0592	DNA-directed DNA polymerase activity
NW94_RS00030	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NW94_RS00115	COG0235	Class ii aldolase
NW94_RS00130	COG5001	Diguanylate cyclase
NW94_RS00130	COG5002	protein histidine kinase activity
NW94_RS00175	COG2204	response regulator
NW94_RS00195	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NW94_RS00205	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NW94_RS00225	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NW94_RS00230	COG1596	polysaccharide export
NW94_RS00270	COG1917	Cupin 2, conserved barrel domain protein
NW94_RS00270	COG4977	sequence-specific DNA binding
NW94_RS00275	COG0625	glutathione transferase activity
NW94_RS00280	COG0625	glutathione transferase activity
NW94_RS00295	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NW94_RS00305	COG0588	phosphoglycerate mutase activity
NW94_RS00345	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
NW94_RS00350	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NW94_RS00355	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NW94_RS00360	COG0006	proline dipeptidase activity
NW94_RS00370	COG0625	glutathione transferase activity
NW94_RS00380	COG0069	glutamate synthase activity
NW94_RS00470	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NW94_RS00470	COG3008	intermembrane lipid transfer
NW94_RS00475	COG2995	paraquat-inducible protein a
NW94_RS00495	COG2353	YceI-like domain
NW94_RS00500	COG2353	YceI-like domain
NW94_RS00515	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NW94_RS00520	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NW94_RS00525	COG1862	Preprotein translocase
NW94_RS00530	COG0343	queuine tRNA-ribosyltransferase activity
NW94_RS00545	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NW94_RS00570	COG0783	Belongs to the Dps family
NW94_RS00595	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
NW94_RS00600	COG2188	Transcriptional regulator
NW94_RS00610	COG3624	Phosphonate C-P lyase system protein PhnG
NW94_RS00620	COG3626	phosphonate metabolism
NW94_RS00625	COG3627	carbon phosphorus lyase activity
NW94_RS00630	COG4107	phosphonate C-P lyase system protein PhnK
NW94_RS00635	COG4778	phosphonate C-P lyase system protein PhnL
NW94_RS00640	COG3454	Phosphonate metabolism
NW94_RS00645	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
NW94_RS00655	COG3639	organic phosphonate transmembrane transporter activity
NW94_RS00680	COG0247	lactate metabolic process
NW94_RS00685	COG0277	FAD linked oxidase domain protein
NW94_RS00690	COG0277	FAD linked oxidase domain protein
NW94_RS00695	COG0277	FAD linked oxidase domain protein
NW94_RS00700	COG2096	Adenosyltransferase
NW94_RS00705	COG1017	nitric oxide dioxygenase activity
NW94_RS00705	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NW94_RS00730	COG0418	dihydroorotase activity
NW94_RS00740	COG0121	glutamine amidotransferase
NW94_RS00790	COG1126	abc transporter atp-binding protein
NW94_RS00795	COG0765	amino acid transport
NW94_RS00800	COG0765	amino acid transport
NW94_RS00805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW94_RS00810	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NW94_RS00820	COG0583	DNA-binding transcription factor activity
NW94_RS00825	COG2223	nitrite transmembrane transporter activity
NW94_RS00850	COG0800	Aldolase
NW94_RS00865	COG1737	Transcriptional regulator
NW94_RS00875	COG1981	membrane
NW94_RS00880	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NW94_RS00885	COG1466	dna polymerase III delta subunit
NW94_RS00915	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NW94_RS00920	COG0735	belongs to the Fur family
NW94_RS00930	COG4266	Belongs to the allantoicase family
NW94_RS00945	COG0629	single-stranded DNA binding
NW94_RS00950	COG2814	Major facilitator Superfamily
NW94_RS00985	COG1280	lysine exporter protein (LysE YggA)
NW94_RS01010	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
NW94_RS01025	COG1137	ATPase activity
NW94_RS01030	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
NW94_RS01040	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NW94_RS01065	COG1194	a g-specific adenine glycosylase
NW94_RS01080	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
NW94_RS01095	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NW94_RS01110	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NW94_RS01115	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NW94_RS01130	COG0742	ribosomal rna small subunit methyltransferase
NW94_RS01140	COG0625	glutathione transferase activity
NW94_RS01150	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NW94_RS01160	COG0243	molybdopterin cofactor binding
NW94_RS01165	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NW94_RS01180	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NW94_RS01190	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
NW94_RS01200	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NW94_RS01225	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
NW94_RS01240	COG0587	DNA-directed DNA polymerase activity
NW94_RS01250	COG2814	Major facilitator Superfamily
NW94_RS01285	COG2226	methyltransferase
NW94_RS01295	COG1960	acyl-CoA dehydrogenase activity
NW94_RS01350	COG0583	DNA-binding transcription factor activity
NW94_RS01360	COG2188	Transcriptional regulator
NW94_RS01365	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NW94_RS01370	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NW94_RS01375	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NW94_RS01375	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NW94_RS01380	COG2190	(PTS) system
NW94_RS01380	COG1263	PTS System
NW94_RS01380	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NW94_RS01405	COG1294	oxidase, subunit
NW94_RS01435	COG0531	amino acid
NW94_RS01455	COG0668	transmembrane transport
NW94_RS01475	COG0789	Transcriptional regulator
NW94_RS01485	COG0277	FAD linked oxidase domain protein
NW94_RS01505	COG0436	Aminotransferase
NW94_RS01525	COG1960	acyl-CoA dehydrogenase activity
NW94_RS01540	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
NW94_RS01540	COG0506	proline dehydrogenase activity
NW94_RS01540	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
NW94_RS01560	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NW94_RS01580	COG1832	CoA-binding protein
NW94_RS01600	COG0318	PFAM AMP-dependent synthetase and ligase
NW94_RS01640	COG0356	it plays a direct role in the translocation of protons across the membrane
NW94_RS01655	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
NW94_RS01660	COG1475	DNA binding
NW94_RS01665	COG1192	Involved in chromosome partitioning
NW94_RS01710	COG0559	Belongs to the binding-protein-dependent transport system permease family
NW94_RS01740	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
NW94_RS01750	COG0583	DNA-binding transcription factor activity
NW94_RS01765	COG1522	sequence-specific DNA binding
NW94_RS01770	COG3186	Phenylalanine-4-hydroxylase
NW94_RS01790	COG0642	Histidine kinase
NW94_RS01810	COG1902	pentaerythritol trinitrate reductase activity
NW94_RS01815	COG0519	Catalyzes the synthesis of GMP from XMP
NW94_RS01815	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NW94_RS01875	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NW94_RS01885	COG1522	sequence-specific DNA binding
NW94_RS01890	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NW94_RS01910	COG0738	Major facilitator superfamily
NW94_RS01940	COG3397	chitin binding
NW94_RS01965	COG2267	carboxylic ester hydrolase activity
NW94_RS02010	COG1280	lysine exporter protein (LysE YggA)
NW94_RS02040	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS02055	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NW94_RS02100	COG0519	Catalyzes the synthesis of GMP from XMP
NW94_RS02110	COG0561	phosphatase activity
NW94_RS02115	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NW94_RS02135	COG0438	transferase activity, transferring glycosyl groups
NW94_RS02165	COG2201	protein-glutamate methylesterase activity
NW94_RS02185	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
NW94_RS02195	COG2201	protein-glutamate methylesterase activity
NW94_RS02205	COG0745	RESPONSE REGULATOR receiver
NW94_RS02210	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
NW94_RS02230	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NW94_RS02235	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NW94_RS02265	COG1950	PFAM Membrane protein of
NW94_RS02270	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
NW94_RS02400	COG0308	aminopeptidase N
NW94_RS02480	COG0443	Heat shock 70 kDa protein
NW94_RS02505	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
NW94_RS02510	COG2823	Periplasmic or secreted lipoprotein
NW94_RS02525	COG1113	amino acid transport
NW94_RS02545	COG1278	Cold shock
NW94_RS02590	COG0232	Belongs to the dGTPase family. Type 2 subfamily
NW94_RS02600	COG1175	transmembrane transport
NW94_RS02605	COG0395	ABC-type sugar transport system, permease component
NW94_RS02610	COG3842	ATPase activity
NW94_RS02615	COG0584	glycerophosphoryl diester phosphodiesterase
NW94_RS02630	COG0070	glutamate synthase
NW94_RS02630	COG0069	glutamate synthase activity
NW94_RS02630	COG0067	glutamate synthase
NW94_RS02645	COG1115	amino acid carrier protein
NW94_RS02655	COG4178	(ABC) transporter
NW94_RS02680	COG1127	ABC transporter
NW94_RS02685	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NW94_RS02690	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NW94_RS02715	COG1131	(ABC) transporter
NW94_RS02720	COG0842	Transport permease protein
NW94_RS02730	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NW94_RS02740	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NW94_RS02745	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NW94_RS02755	COG2095	MarC family integral membrane protein
NW94_RS02800	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NW94_RS02805	COG0805	protein transport
NW94_RS02815	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NW94_RS02820	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NW94_RS02825	COG0723	plastoquinol--plastocyanin reductase activity
NW94_RS02830	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NW94_RS02835	COG2857	Cytochrome c1
NW94_RS02840	COG0625	glutathione transferase activity
NW94_RS02845	COG2969	positive regulation of protein catabolic process
NW94_RS02860	COG4695	Portal protein
NW94_RS02865	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NW94_RS02870	COG3657	addiction module killer protein
NW94_RS02885	COG1987	bacterial-type flagellum assembly
NW94_RS02895	COG0789	Transcriptional regulator
NW94_RS02900	COG4106	trans-aconitate 2-methyltransferase activity
NW94_RS02900	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
NW94_RS02910	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NW94_RS02920	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NW94_RS02935	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS02960	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS03035	COG1695	Transcriptional regulator
NW94_RS03075	COG1960	acyl-CoA dehydrogenase activity
NW94_RS03085	COG0183	Belongs to the thiolase family
NW94_RS03090	COG1250	3-hydroxyacyl-CoA dehydrogenase
NW94_RS03090	COG1024	Enoyl-CoA hydratase
NW94_RS03100	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NW94_RS03140	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NW94_RS03160	COG1346	cytolysis
NW94_RS03170	COG0583	DNA-binding transcription factor activity
NW94_RS03180	COG1846	Transcriptional regulator
NW94_RS03225	COG2165	general secretion pathway protein
NW94_RS03245	COG1459	type II secretion system
NW94_RS03270	COG0523	cobalamin synthesis protein
NW94_RS03305	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
NW94_RS03310	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NW94_RS03360	COG2814	Major facilitator Superfamily
NW94_RS03370	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NW94_RS03375	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NW94_RS03380	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NW94_RS03390	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NW94_RS03420	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NW94_RS03425	COG1546	Belongs to the CinA family
NW94_RS03430	COG0284	orotidine-5'-phosphate decarboxylase activity
NW94_RS03440	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS03445	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW94_RS03450	COG1129	ABC transporter
NW94_RS03460	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS03470	COG3734	2-keto-3-deoxy-galactonokinase
NW94_RS03475	COG1414	Transcriptional regulator
NW94_RS03495	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NW94_RS03500	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NW94_RS03505	COG0557	exoribonuclease II activity
NW94_RS03510	COG3150	esterase
NW94_RS03515	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NW94_RS03525	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NW94_RS03530	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NW94_RS03535	COG0511	ligase activity, forming carbon-carbon bonds
NW94_RS03540	COG0439	Biotin carboxylase
NW94_RS03555	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NW94_RS03560	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NW94_RS03620	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
NW94_RS03625	COG2095	MarC family integral membrane protein
NW94_RS03660	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
NW94_RS03665	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NW94_RS03700	COG0583	DNA-binding transcription factor activity
NW94_RS03715	COG2814	Major facilitator Superfamily
NW94_RS03725	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
NW94_RS03730	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NW94_RS03735	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NW94_RS03745	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NW94_RS03775	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NW94_RS03780	COG1546	Belongs to the CinA family
NW94_RS03785	COG0284	orotidine-5'-phosphate decarboxylase activity
NW94_RS03795	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS03800	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW94_RS03805	COG1129	ABC transporter
NW94_RS03815	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS03825	COG3734	2-keto-3-deoxy-galactonokinase
NW94_RS03830	COG1414	Transcriptional regulator
NW94_RS03850	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NW94_RS03855	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NW94_RS03860	COG0557	exoribonuclease II activity
NW94_RS03865	COG3150	esterase
NW94_RS03870	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NW94_RS03880	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NW94_RS03885	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NW94_RS03890	COG0511	ligase activity, forming carbon-carbon bonds
NW94_RS03895	COG0439	Biotin carboxylase
NW94_RS03910	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NW94_RS03915	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NW94_RS03970	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NW94_RS03975	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
NW94_RS04030	COG0142	geranyltranstransferase activity
NW94_RS04055	COG4536	flavin adenine dinucleotide binding
NW94_RS04060	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NW94_RS04070	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
NW94_RS04085	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
NW94_RS04090	COG0494	nUDIX hydrolase
NW94_RS04100	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NW94_RS04125	COG0678	peroxiredoxin activity
NW94_RS04145	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
NW94_RS04180	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NW94_RS04185	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NW94_RS04195	COG3116	cell division
NW94_RS04215	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS04265	COG1024	Enoyl-CoA hydratase
NW94_RS04290	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
NW94_RS04300	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
NW94_RS04315	COG0737	Belongs to the 5'-nucleotidase family
NW94_RS04320	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NW94_RS04325	COG1127	ABC transporter
NW94_RS04360	COG1686	Belongs to the peptidase S11 family
NW94_RS04370	COG2921	Belongs to the UPF0250 family
NW94_RS04375	COG0583	DNA-binding transcription factor activity
NW94_RS04420	COG1250	3-hydroxyacyl-CoA dehydrogenase
NW94_RS04420	COG1024	Enoyl-CoA hydratase
NW94_RS04425	COG1960	acyl-CoA dehydrogenase activity
NW94_RS04430	COG1960	acyl-CoA dehydrogenase activity
NW94_RS04435	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NW94_RS04445	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NW94_RS04465	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NW94_RS04505	COG2960	long-chain fatty acid transporting porin activity
NW94_RS04515	COG0004	ammonium transporteR
NW94_RS04600	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS04620	COG2824	Alkylphosphonate utilization operon protein PhnA
NW94_RS04655	COG2233	PERMEase
NW94_RS04665	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NW94_RS04675	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
NW94_RS04685	COG1706	bacterial-type flagellum-dependent cell motility
NW94_RS04690	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
NW94_RS04705	COG1749	Flagellar hook protein flgE
NW94_RS04710	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
NW94_RS04715	COG1558	bacterial-type flagellum-dependent cell motility
NW94_RS04720	COG1815	bacterial-type flagellum-dependent cell motility
NW94_RS04735	COG2747	anti-sigma28 factor FlgM
NW94_RS04780	COG0741	lytic transglycosylase activity
NW94_RS04785	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NW94_RS04795	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
NW94_RS04800	COG1984	allophanate hydrolase subunit 2
NW94_RS04830	COG4608	Belongs to the ABC transporter superfamily
NW94_RS04835	COG0444	Belongs to the ABC transporter superfamily
NW94_RS04845	COG0601	transmembrane transport
NW94_RS04850	COG0747	negative chemotaxis
NW94_RS04870	COG0579	oxidoreductase
NW94_RS04890	COG3568	Endonuclease Exonuclease Phosphatase
NW94_RS04895	COG1280	lysine exporter protein (LysE YggA)
NW94_RS04915	COG0531	amino acid
NW94_RS04930	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NW94_RS05005	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NW94_RS05015	COG2814	Major facilitator Superfamily
NW94_RS05035	COG0667	Aldo Keto reductase
NW94_RS05065	COG1560	Kdo2-lipid A biosynthetic process
NW94_RS05080	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
NW94_RS05090	COG0523	cobalamin synthesis protein
NW94_RS05120	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
NW94_RS05145	COG1309	transcriptional regulator
NW94_RS05160	COG2814	Major facilitator Superfamily
NW94_RS05170	COG2207	Transcriptional regulator
NW94_RS05185	COG1064	alcohol dehydrogenase
NW94_RS05205	COG0189	ligase activity
NW94_RS05215	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NW94_RS05220	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NW94_RS05230	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NW94_RS05235	COG0793	Belongs to the peptidase S41A family
NW94_RS05245	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NW94_RS05265	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
NW94_RS05280	COG1040	competence protein
NW94_RS05285	COG2226	methyltransferase
NW94_RS05300	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NW94_RS05310	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
NW94_RS05340	COG1612	heme a metabolic process
NW94_RS05350	COG1999	signal sequence binding
NW94_RS05360	COG0840	transmembrane signaling receptor activity
NW94_RS05380	COG4303	Ethanolamine ammonia lyase large subunit
NW94_RS05385	COG4302	ethanolamine ammonia-lyase activity
NW94_RS05395	COG1012	belongs to the aldehyde dehydrogenase family
NW94_RS05425	COG1760	l-serine dehydratase
NW94_RS05445	COG0509	glycine decarboxylation via glycine cleavage system
NW94_RS05460	COG0673	inositol 2-dehydrogenase activity
NW94_RS05480	COG0210	DNA helicase
NW94_RS05485	COG3245	cytochrome
NW94_RS05495	COG0582	viral genome integration into host DNA
NW94_RS05530	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NW94_RS05580	COG0514	ATP-dependent DNA helicase (RecQ)
NW94_RS05710	COG0201	protein transport
NW94_RS05755	COG4232	protein-disulfide reductase activity
NW94_RS05775	COG1333	cytochrome c biogenesis protein
NW94_RS05780	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NW94_RS05805	COG3047	cAMP biosynthetic process
NW94_RS05825	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NW94_RS05840	COG1881	PFAM PEBP family protein
NW94_RS05845	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NW94_RS05855	COG0280	phosphate acetyltransferase
NW94_RS05855	COG0281	malic enzyme
NW94_RS05890	COG1522	sequence-specific DNA binding
NW94_RS05910	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NW94_RS05920	COG3396	Phenylacetate-CoA oxygenase
NW94_RS05925	COG3460	Phenylacetate-CoA oxygenase
NW94_RS05930	COG3396	Phenylacetate-CoA oxygenase
NW94_RS06015	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NW94_RS06020	COG4221	oxidoreductase activity
NW94_RS06025	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS06045	COG0747	negative chemotaxis
NW94_RS06050	COG0488	(ABC) transporter
NW94_RS06070	COG0288	reversible hydration of carbon dioxide
NW94_RS06075	COG0183	Belongs to the thiolase family
NW94_RS06085	COG3012	SEC-C Motif Domain Protein
NW94_RS06135	COG1785	Belongs to the alkaline phosphatase family
NW94_RS06155	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS06180	COG0840	transmembrane signaling receptor activity
NW94_RS06185	COG1609	Transcriptional regulator
NW94_RS06245	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NW94_RS06260	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NW94_RS06265	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NW94_RS06285	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
NW94_RS06290	COG1704	LemA family
NW94_RS06350	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NW94_RS06360	COG0312	modulator of DNA gyrase
NW94_RS06365	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NW94_RS06370	COG3164	Protein of unknown function
NW94_RS06375	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
NW94_RS06380	COG0497	DNA recombination
NW94_RS06425	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NW94_RS06435	COG1428	Deoxynucleoside kinase
NW94_RS06440	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NW94_RS06445	COG0617	tRNA 3'-terminal CCA addition
NW94_RS06455	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NW94_RS06485	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NW94_RS06490	COG0586	Pfam SNARE associated Golgi protein
NW94_RS06590	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NW94_RS06605	COG1368	sulfuric ester hydrolase activity
NW94_RS06610	COG0604	alcohol dehydrogenase
NW94_RS06610	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS06610	COG3321	synthase
NW94_RS06615	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
NW94_RS06620	COG0156	8-amino-7-oxononanoate synthase activity
NW94_RS06660	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NW94_RS06700	COG0656	L-ascorbic acid biosynthetic process
NW94_RS06705	COG2188	Transcriptional regulator
NW94_RS06725	COG2814	Major facilitator Superfamily
NW94_RS06780	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NW94_RS06785	COG1570	exodeoxyribonuclease VII activity
NW94_RS06795	COG1663	tetraacyldisaccharide 4'-kinase activity
NW94_RS06825	COG1278	Cold shock
NW94_RS06835	COG0542	response to heat
NW94_RS06875	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NW94_RS06880	COG0196	riboflavin kinase activity
NW94_RS06885	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NW94_RS06890	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NW94_RS06890	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NW94_RS06895	COG3264	Mechanosensitive ion channel
NW94_RS06895	COG1511	domain protein
NW94_RS06920	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
NW94_RS06940	COG1047	Peptidyl-prolyl cis-trans
NW94_RS06945	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NW94_RS07000	COG1773	rubredoxin
NW94_RS07015	COG0488	(ABC) transporter
NW94_RS07045	COG0583	DNA-binding transcription factor activity
NW94_RS07055	COG0583	DNA-binding transcription factor activity
NW94_RS07065	COG0477	Major facilitator Superfamily
NW94_RS07120	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NW94_RS07150	COG0859	PFAM glycosyl transferase family 9
NW94_RS07205	COG1129	ABC transporter
NW94_RS07215	COG0559	Belongs to the binding-protein-dependent transport system permease family
NW94_RS07230	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NW94_RS07240	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
NW94_RS07250	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NW94_RS07275	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NW94_RS07285	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NW94_RS07290	COG2226	methyltransferase
NW94_RS07325	COG0762	integral membrane protein
NW94_RS07360	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
NW94_RS07375	COG0436	Aminotransferase
NW94_RS07405	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NW94_RS07405	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NW94_RS07430	COG2814	Major facilitator Superfamily
NW94_RS07445	COG1126	abc transporter atp-binding protein
NW94_RS07450	COG0765	amino acid transport
NW94_RS07455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW94_RS07470	COG0363	glucosamine-6-phosphate deaminase activity
NW94_RS07475	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NW94_RS07485	COG1175	transmembrane transport
NW94_RS07490	COG0395	ABC-type sugar transport system, permease component
NW94_RS07495	COG3842	ATPase activity
NW94_RS07500	COG2860	membrane
NW94_RS07505	COG1193	negative regulation of DNA recombination
NW94_RS07510	COG0492	ferredoxin-NADP+ reductase activity
NW94_RS07515	COG1674	ftsk spoiiie
NW94_RS07520	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
NW94_RS07530	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NW94_RS07575	COG2894	cell division
NW94_RS07595	COG0859	PFAM glycosyl transferase family 9
NW94_RS07605	COG0477	Major facilitator Superfamily
NW94_RS07640	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NW94_RS07645	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NW94_RS07655	COG1561	YicC-like family, N-terminal region
NW94_RS07670	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NW94_RS07725	COG2885	chlorophyll binding
NW94_RS07730	COG0823	Involved in the tonB-independent uptake of proteins
NW94_RS07750	COG0824	Thioesterase
NW94_RS07755	COG4221	oxidoreductase activity
NW94_RS07815	COG0450	alkyl hydroperoxide reductase
NW94_RS07825	COG1960	acyl-CoA dehydrogenase activity
NW94_RS07860	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NW94_RS07870	COG2814	Major facilitator Superfamily
NW94_RS07895	COG2814	Major facilitator Superfamily
NW94_RS07900	COG0778	Nitroreductase
NW94_RS07905	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NW94_RS07910	COG0583	DNA-binding transcription factor activity
NW94_RS07925	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
NW94_RS07955	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NW94_RS07980	COG4774	siderophore transport
NW94_RS07985	COG1120	ATPase activity
NW94_RS07995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NW94_RS08040	COG0730	response to heat
NW94_RS08055	COG0584	glycerophosphoryl diester phosphodiesterase
NW94_RS08060	COG1280	lysine exporter protein (LysE YggA)
NW94_RS08120	COG0604	alcohol dehydrogenase
NW94_RS08125	COG1733	regulation of RNA biosynthetic process
NW94_RS08140	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NW94_RS08155	COG1773	rubredoxin
NW94_RS08175	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NW94_RS08250	COG1215	transferase activity, transferring glycosyl groups
NW94_RS08265	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NW94_RS08310	COG0456	acetyltransferase
NW94_RS08315	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NW94_RS08320	COG0543	2 iron, 2 sulfur cluster binding
NW94_RS08320	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NW94_RS08335	COG1187	pseudouridine synthase activity
NW94_RS08345	COG0583	DNA-binding transcription factor activity
NW94_RS08355	COG2267	carboxylic ester hydrolase activity
NW94_RS08360	COG2258	MOSC domain
NW94_RS08365	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NW94_RS08375	COG1396	sequence-specific DNA binding
NW94_RS08390	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW94_RS08395	COG0697	spore germination
NW94_RS08405	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW94_RS08430	COG4106	trans-aconitate 2-methyltransferase activity
NW94_RS08445	COG2764	glyoxalase bleomycin resistance protein dioxygenase
NW94_RS08460	COG3135	benzoate transporter
NW94_RS08510	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NW94_RS08515	COG2878	Part of a membrane complex involved in electron transport
NW94_RS08520	COG1309	transcriptional regulator
NW94_RS08530	COG3387	PFAM Glycoside hydrolase 15-related
NW94_RS08540	COG2706	6-phosphogluconolactonase activity
NW94_RS08550	COG1674	ftsk spoiiie
NW94_RS08585	COG0513	Belongs to the DEAD box helicase family
NW94_RS08595	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NW94_RS08635	COG0438	transferase activity, transferring glycosyl groups
NW94_RS08640	COG0859	PFAM glycosyl transferase family 9
NW94_RS08680	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NW94_RS08690	COG1595	DNA-templated transcription, initiation
NW94_RS08745	COG2233	PERMEase
NW94_RS08770	COG0799	negative regulation of ribosome biogenesis
NW94_RS08785	COG0151	Belongs to the GarS family
NW94_RS08805	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS08835	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
NW94_RS08840	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
NW94_RS08860	COG0745	RESPONSE REGULATOR receiver
NW94_RS08895	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NW94_RS08905	COG0154	amidase activity
NW94_RS08935	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS08955	COG0438	transferase activity, transferring glycosyl groups
NW94_RS08990	COG0028	Belongs to the TPP enzyme family
NW94_RS09010	COG1183	phosphatidylcholine synthase activity
NW94_RS09020	COG0659	secondary active sulfate transmembrane transporter activity
NW94_RS09025	COG0288	reversible hydration of carbon dioxide
NW94_RS09040	COG0683	leucine binding
NW94_RS09060	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NW94_RS09060	COG0604	alcohol dehydrogenase
NW94_RS09060	COG4221	oxidoreductase activity
NW94_RS09060	COG3321	synthase
NW94_RS09065	COG0149	triose-phosphate isomerase activity
NW94_RS09100	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
NW94_RS09110	COG1034	ATP synthesis coupled electron transport
NW94_RS09145	COG1007	ATP synthesis coupled electron transport
NW94_RS09165	COG1960	acyl-CoA dehydrogenase activity
NW94_RS09170	COG1960	acyl-CoA dehydrogenase activity
NW94_RS09175	COG1012	belongs to the aldehyde dehydrogenase family
NW94_RS09175	COG2030	dehydratase
NW94_RS09195	COG1960	acyl-CoA dehydrogenase activity
NW94_RS09205	COG0588	phosphoglycerate mutase activity
NW94_RS09210	COG1024	Enoyl-CoA hydratase
NW94_RS09220	COG0436	Aminotransferase
NW94_RS09235	COG2866	Carboxypeptidase
NW94_RS09310	COG1959	2 iron, 2 sulfur cluster binding
NW94_RS09335	COG1522	sequence-specific DNA binding
NW94_RS09340	COG3842	ATPase activity
NW94_RS09345	COG1176	ABC-type spermidine putrescine transport system, permease component I
NW94_RS09350	COG1840	ABC-type Fe3 transport system, periplasmic component
NW94_RS09375	COG1289	transmembrane transporter activity
NW94_RS09385	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
NW94_RS09390	COG1074	ATP-dependent DNA helicase activity
NW94_RS09395	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NW94_RS09455	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
NW94_RS09460	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NW94_RS09475	COG0697	spore germination
NW94_RS09485	COG2814	Major facilitator Superfamily
NW94_RS09510	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
NW94_RS09520	COG3842	ATPase activity
NW94_RS09525	COG1177	transmembrane transport
NW94_RS09540	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
NW94_RS09545	COG1840	ABC-type Fe3 transport system, periplasmic component
NW94_RS09550	COG1609	Transcriptional regulator
NW94_RS09615	COG1522	sequence-specific DNA binding
NW94_RS09640	COG0583	DNA-binding transcription factor activity
NW94_RS09675	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW94_RS09720	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
NW94_RS09725	COG1250	3-hydroxyacyl-CoA dehydrogenase
NW94_RS09735	COG0583	DNA-binding transcription factor activity
NW94_RS09760	COG3052	prosthetic group binding
NW94_RS09780	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
NW94_RS09790	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NW94_RS09830	COG0477	Major facilitator Superfamily
NW94_RS09845	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NW94_RS09850	COG0328	RNA-DNA hybrid ribonuclease activity
NW94_RS09855	COG2226	methyltransferase
NW94_RS09860	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NW94_RS09865	COG0741	lytic transglycosylase activity
NW94_RS09865	COG1388	LysM domain
NW94_RS09895	COG0505	Belongs to the CarA family
NW94_RS09905	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
NW94_RS09910	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NW94_RS09920	COG1534	Rna-binding protein
NW94_RS09930	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NW94_RS09935	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NW94_RS09950	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NW94_RS09955	COG0573	inorganic phosphate transmembrane transporter activity
NW94_RS09960	COG0581	inorganic phosphate transmembrane transporter activity
NW94_RS09975	COG0745	RESPONSE REGULATOR receiver
NW94_RS09990	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NW94_RS10070	COG0534	Mate efflux family protein
NW94_RS10080	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NW94_RS10085	COG4942	peptidase
NW94_RS10125	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
NW94_RS10175	COG0366	Alpha amylase catalytic
NW94_RS10180	COG0366	Alpha amylase catalytic
NW94_RS10230	COG0583	DNA-binding transcription factor activity
NW94_RS10235	COG0745	RESPONSE REGULATOR receiver
NW94_RS10280	COG0859	PFAM glycosyl transferase family 9
NW94_RS10280	COG0457	Tetratricopeptide repeat
NW94_RS10380	COG1914	H( )-stimulated, divalent metal cation uptake system
NW94_RS10420	COG2814	Major facilitator Superfamily
NW94_RS10430	COG0583	DNA-binding transcription factor activity
NW94_RS10485	COG2197	response regulator
NW94_RS10500	COG2814	Major facilitator Superfamily
NW94_RS10510	COG1566	PFAM secretion protein HlyD family protein
NW94_RS10525	COG3511	phospholipase C
NW94_RS10530	COG1858	cytochrome C peroxidase
NW94_RS10560	COG1051	belongs to the nudix hydrolase family
NW94_RS10570	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NW94_RS10580	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NW94_RS10635	COG2816	NAD+ diphosphatase activity
NW94_RS10660	COG0824	Thioesterase
NW94_RS10670	COG0411	ABC transporter
NW94_RS10680	COG3718	enzyme involved in inositol metabolism
NW94_RS10690	COG3962	Belongs to the TPP enzyme family
NW94_RS10705	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW94_RS10720	COG0673	inositol 2-dehydrogenase activity
NW94_RS10725	COG0673	inositol 2-dehydrogenase activity
NW94_RS10735	COG0425	Belongs to the sulfur carrier protein TusA family
NW94_RS10745	COG0745	RESPONSE REGULATOR receiver
NW94_RS10755	COG5002	protein histidine kinase activity
NW94_RS10765	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NW94_RS10770	COG0525	valine-tRNA ligase activity
NW94_RS10775	COG0210	DNA helicase
NW94_RS10780	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NW94_RS10785	COG2223	nitrite transmembrane transporter activity
NW94_RS10790	COG0840	transmembrane signaling receptor activity
NW94_RS10825	COG0583	DNA-binding transcription factor activity
NW94_RS10840	COG0277	FAD linked oxidase domain protein
NW94_RS10855	COG1295	ribonuclease BN
NW94_RS10905	COG2801	Transposase and inactivated derivatives
NW94_RS10920	COG2192	nodulation
NW94_RS10935	COG2801	Transposase and inactivated derivatives
NW94_RS10975	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
NW94_RS10980	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NW94_RS10985	COG0508	dehydrogenase complex catalyzes the overall conversion of
NW94_RS10990	COG0567	Dehydrogenase, E1 component
NW94_RS10995	COG1217	gtp-binding protein TYPA
NW94_RS11005	COG1846	Transcriptional regulator
NW94_RS11015	COG1566	PFAM secretion protein HlyD family protein
NW94_RS11020	COG2814	Major facilitator Superfamily
NW94_RS11030	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NW94_RS11045	COG0195	Participates in both transcription termination and antitermination
NW94_RS11045	COG2251	uridine kinase activity
NW94_RS11055	COG1187	pseudouridine synthase activity
NW94_RS11060	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NW94_RS11065	COG0583	DNA-binding transcription factor activity
NW94_RS11130	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
NW94_RS11165	COG0776	regulation of translation
NW94_RS11170	COG0072	phenylalanine-tRNA ligase activity
NW94_RS11170	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NW94_RS11190	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NW94_RS11205	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NW94_RS11210	COG0251	oxidation-reduction process
NW94_RS11215	COG2267	carboxylic ester hydrolase activity
NW94_RS11225	COG0583	DNA-binding transcription factor activity
NW94_RS11240	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS11295	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS11330	COG3251	PFAM MbtH domain protein
NW94_RS11355	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS11365	COG2207	Transcriptional regulator
NW94_RS11375	COG0835	chemotaxis
NW94_RS11400	COG0318	PFAM AMP-dependent synthetase and ligase
NW94_RS11405	COG0477	Major facilitator Superfamily
NW94_RS11425	COG1732	Glycine betaine
NW94_RS11430	COG1174	glycine betaine transport
NW94_RS11435	COG1125	glycine betaine transport
NW94_RS11440	COG1174	glycine betaine transport
NW94_RS11460	COG2235	arginine
NW94_RS11465	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NW94_RS11490	COG0583	DNA-binding transcription factor activity
NW94_RS11500	COG0625	glutathione transferase activity
NW94_RS11515	COG1846	Transcriptional regulator
NW94_RS11525	COG1649	PFAM Uncharacterised BCR, COG1649
NW94_RS11555	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NW94_RS11575	COG3979	chitinase
NW94_RS11595	COG0400	carboxylic ester hydrolase activity
NW94_RS11655	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NW94_RS11660	COG4774	siderophore transport
NW94_RS11665	COG3486	L-lysine 6-monooxygenase (NADPH) activity
NW94_RS11720	COG1120	ATPase activity
NW94_RS11745	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS11750	COG1070	Carbohydrate kinase
NW94_RS11755	COG1063	alcohol dehydrogenase
NW94_RS11765	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW94_RS11770	COG1129	ABC transporter
NW94_RS11775	COG1879	ABC-type sugar transport system periplasmic component
NW94_RS11810	COG0583	DNA-binding transcription factor activity
NW94_RS11815	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
NW94_RS11820	COG4208	sulfate ABC transporter
NW94_RS11825	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
NW94_RS11830	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
NW94_RS11880	COG0701	Predicted permease
NW94_RS11885	COG0667	Aldo Keto reductase
NW94_RS11915	COG1301	dicarboxylic acid transport
NW94_RS11975	COG1116	anion transmembrane transporter activity
NW94_RS11980	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NW94_RS12045	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW94_RS12050	COG0765	amino acid transport
NW94_RS12060	COG0673	inositol 2-dehydrogenase activity
NW94_RS12065	COG1802	Transcriptional regulator
NW94_RS12075	COG3023	N-Acetylmuramoyl-L-alanine amidase
NW94_RS12085	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NW94_RS12090	COG0557	exoribonuclease II activity
NW94_RS12110	COG0840	transmembrane signaling receptor activity
NW94_RS12140	COG0519	Catalyzes the synthesis of GMP from XMP
NW94_RS12150	COG2814	Major facilitator Superfamily
NW94_RS12160	COG0318	PFAM AMP-dependent synthetase and ligase
NW94_RS12230	COG4964	Belongs to the GSP D family
NW94_RS12270	COG1177	transmembrane transport
NW94_RS12275	COG1176	ABC-type spermidine putrescine transport system, permease component I
NW94_RS12285	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
NW94_RS12290	COG1914	H( )-stimulated, divalent metal cation uptake system
NW94_RS12305	COG3047	cAMP biosynthetic process
NW94_RS12310	COG2070	2-Nitropropane dioxygenase
NW94_RS12330	COG0488	(ABC) transporter
NW94_RS12340	COG2982	Protein involved in outer membrane biogenesis
NW94_RS12345	COG1122	ATPase activity
NW94_RS12350	COG0390	transport system, permease component
NW94_RS12370	COG0560	Phosphoserine phosphatase
NW94_RS12375	COG0626	cystathionine gamma-synthase activity
NW94_RS12385	COG0183	Belongs to the thiolase family
NW94_RS12410	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS12415	COG0183	Belongs to the thiolase family
NW94_RS12420	COG3243	poly(R)-hydroxyalkanoic acid synthase
NW94_RS12430	COG0564	pseudouridine synthase activity
NW94_RS12440	COG1199	ATP-dependent helicase activity
NW94_RS12455	COG2183	response to ionizing radiation
NW94_RS12475	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
NW94_RS12495	COG0330	HflC and HflK could
NW94_RS12500	COG0330	HflC and HflK could
NW94_RS12505	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NW94_RS12520	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NW94_RS12555	COG0670	Belongs to the BI1 family
NW94_RS12600	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NW94_RS12615	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NW94_RS12635	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NW94_RS12640	COG0789	Transcriptional regulator
NW94_RS12645	COG0477	Major facilitator Superfamily
NW94_RS12650	COG3228	Belongs to the MtfA family
NW94_RS12670	COG0534	Mate efflux family protein
NW94_RS12700	COG0542	response to heat
NW94_RS12705	COG1959	2 iron, 2 sulfur cluster binding
NW94_RS12710	COG2346	COG2346, Truncated hemoglobins
NW94_RS12715	COG0314	molybdopterin synthase activity
NW94_RS12720	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
NW94_RS12755	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NW94_RS12760	COG2076	Multidrug Resistance protein
NW94_RS12765	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NW94_RS12770	COG0463	Glycosyl transferase, family 2
NW94_RS12780	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NW94_RS12780	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NW94_RS12785	COG0726	polysaccharide deacetylase
NW94_RS12790	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NW94_RS12800	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
NW94_RS12805	COG0791	NLP P60 protein
NW94_RS12815	COG0306	phosphate transporter
NW94_RS12860	COG1595	DNA-templated transcription, initiation
NW94_RS12890	COG0252	asparaginase activity
NW94_RS12920	COG0438	transferase activity, transferring glycosyl groups
NW94_RS12950	COG0084	hydrolase, TatD family'
NW94_RS12955	COG1247	-acetyltransferase
NW94_RS12970	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NW94_RS12975	COG0354	folic acid binding
NW94_RS12990	COG0657	acetylesterase activity
NW94_RS12995	COG2130	NADP-dependent
NW94_RS13030	COG0183	Belongs to the thiolase family
NW94_RS13035	COG1335	isochorismatase
NW94_RS13040	COG1250	3-hydroxyacyl-CoA dehydrogenase
NW94_RS13040	COG1024	Enoyl-CoA hydratase
NW94_RS13050	COG0318	PFAM AMP-dependent synthetase and ligase
NW94_RS13075	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NW94_RS13085	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NW94_RS13085	COG0047	phosphoribosylformylglycinamidine synthase activity
NW94_RS13095	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NW94_RS13115	COG4181	ATPase activity
NW94_RS13190	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
NW94_RS13220	COG1929	Belongs to the glycerate kinase type-1 family
NW94_RS13225	COG1846	Transcriptional regulator
NW94_RS13235	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NW94_RS13330	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NW94_RS13345	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NW94_RS13435	COG4266	Belongs to the allantoicase family
NW94_RS13440	COG3648	Uricase
NW94_RS13440	COG3195	allantoin biosynthetic process
NW94_RS13455	COG1953	Uracil, thiamine, allantoin
NW94_RS13475	COG1619	proteins homologs of microcin C7 resistance protein MccF
NW94_RS13570	COG0697	spore germination
NW94_RS13580	COG2867	negative regulation of translational initiation
NW94_RS13590	COG0330	HflC and HflK could
NW94_RS13640	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NW94_RS13680	COG0750	zinc metalloprotease
NW94_RS13695	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NW94_RS13725	COG0024	Methionine aminopeptidase
NW94_RS13735	COG1187	pseudouridine synthase activity
NW94_RS13740	COG0242	peptide deformylase activity
NW94_RS13785	COG1393	Belongs to the ArsC family
NW94_RS13795	COG2890	protein-(glutamine-N5) methyltransferase activity
NW94_RS13810	COG0386	Belongs to the glutathione peroxidase family
NW94_RS13815	COG0488	(ABC) transporter
NW94_RS13835	COG0477	Major facilitator Superfamily
NW94_RS13840	COG0351	phosphomethylpyrimidine kinase
NW94_RS13855	COG1573	uracil-dna glycosylase
NW94_RS13865	COG1214	PFAM Peptidase M22, glycoprotease
NW94_RS13875	COG0513	Belongs to the DEAD box helicase family
NW94_RS13885	COG2224	Isocitrate lyase
NW94_RS13895	COG0583	DNA-binding transcription factor activity
NW94_RS13905	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
NW94_RS13960	COG1752	Esterase of the alpha-beta hydrolase superfamily
NW94_RS13965	COG0791	NLP P60 protein
NW94_RS13975	COG4172	Belongs to the ABC transporter superfamily
NW94_RS13980	COG4239	(ABC) transporter, permease
NW94_RS13985	COG4174	ABC transporter (Permease)
NW94_RS13990	COG4166	transmembrane transport
NW94_RS14015	COG0243	molybdopterin cofactor binding
NW94_RS14045	COG0024	Methionine aminopeptidase
NW94_RS14065	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NW94_RS14085	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NW94_RS14100	COG3958	Transketolase
NW94_RS14105	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NW94_RS14125	COG2175	clavaminate synthase activity
NW94_RS14155	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NW94_RS14160	COG2895	sulfate adenylyltransferase (ATP) activity
NW94_RS14160	COG0529	Catalyzes the synthesis of activated sulfate
NW94_RS14180	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NW94_RS14185	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NW94_RS14225	COG0527	aspartate kinase activity
NW94_RS14235	COG0037	tRNA processing
NW94_RS14260	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NW94_RS14270	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NW94_RS14280	COG1045	serine acetyltransferase
NW94_RS14295	COG0483	inositol monophosphate 1-phosphatase activity
NW94_RS14335	COG2850	peptidyl-arginine hydroxylation
NW94_RS14350	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
NW94_RS14355	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
NW94_RS14360	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NW94_RS14370	COG0180	Tryptophanyl-tRNA synthetase
NW94_RS14375	COG1994	Peptidase M50
NW94_RS14380	COG0009	L-threonylcarbamoyladenylate synthase
NW94_RS14385	COG0613	PHP domain protein
NW94_RS14395	COG0596	Alpha beta hydrolase
NW94_RS14405	COG2833	Protein of unknown function (DUF455)
NW94_RS14415	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NW94_RS14425	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NW94_RS14455	COG0658	competence protein
NW94_RS14455	COG2333	competence protein COMEC
NW94_RS14460	COG0084	hydrolase, TatD family'
NW94_RS14465	COG1136	(ABC) transporter
NW94_RS14485	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
NW94_RS14510	COG2975	iron-sulfur cluster assembly
NW94_RS14530	COG0316	Belongs to the HesB IscA family
NW94_RS14535	COG0822	iron-sulfur transferase activity
NW94_RS14540	COG1104	cysteine desulfurase activity
NW94_RS14550	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NW94_RS14575	COG1414	Transcriptional regulator
NW94_RS14605	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NW94_RS14615	COG0508	dehydrogenase complex catalyzes the overall conversion of
NW94_RS14620	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
NW94_RS14630	COG4566	intracellular signal transduction
NW94_RS14650	COG0339	signal peptide processing
NW94_RS14655	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NW94_RS14675	COG2223	nitrite transmembrane transporter activity
NW94_RS14680	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
NW94_RS14685	COG1140	nitrate reductase beta subunit
NW94_RS14690	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
NW94_RS14695	COG2181	nitrate reductase activity
NW94_RS14700	COG4585	Histidine kinase
NW94_RS14705	COG2197	response regulator
NW94_RS14730	COG0174	glutamine synthetase
NW94_RS14745	COG1058	Belongs to the CinA family
NW94_RS14745	COG1546	Belongs to the CinA family
NW94_RS14770	COG1643	Atp-dependent helicase
NW94_RS14775	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
NW94_RS14775	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NW94_RS14785	COG0477	Major facilitator Superfamily
NW94_RS14800	COG1960	acyl-CoA dehydrogenase activity
NW94_RS14805	COG0583	DNA-binding transcription factor activity
NW94_RS14835	COG1116	anion transmembrane transporter activity
NW94_RS14840	COG1176	ABC-type spermidine putrescine transport system, permease component I
NW94_RS14890	COG4215	(ABC) transporter
NW94_RS14910	COG0347	Belongs to the P(II) protein family
NW94_RS14940	COG2827	Endonuclease containing a URI domain
NW94_RS14945	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NW94_RS14960	COG2271	Major facilitator Superfamily
NW94_RS15000	COG2226	methyltransferase
NW94_RS15040	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NW94_RS15065	COG0489	protein tyrosine kinase activity
NW94_RS15075	COG2885	chlorophyll binding
NW94_RS15075	COG3047	cAMP biosynthetic process
NW94_RS15105	COG2911	Protein conserved in bacteria
NW94_RS15110	COG0729	surface antigen
NW94_RS15120	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NW94_RS15140	COG0489	protein tyrosine kinase activity
NW94_RS15145	COG2259	Doxx family
NW94_RS15150	COG1492	cobalamin metabolic process
NW94_RS15170	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NW94_RS15190	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
NW94_RS15195	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
NW94_RS15200	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
NW94_RS15210	COG4206	TonB-dependent receptor
NW94_RS15265	COG4654	Cytochrome c, class I
NW94_RS15285	COG0795	lipopolysaccharide-transporting ATPase activity
NW94_RS15300	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NW94_RS15300	COG1648	precorrin-2 dehydrogenase activity
NW94_RS15305	COG2895	sulfate adenylyltransferase (ATP) activity
NW94_RS15315	COG0175	sulfate reduction
NW94_RS15330	COG0583	DNA-binding transcription factor activity
NW94_RS15360	COG0174	glutamine synthetase
NW94_RS15365	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
NW94_RS15400	COG0402	S-adenosylhomocysteine deaminase activity
NW94_RS15415	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
NW94_RS15465	COG0529	Catalyzes the synthesis of activated sulfate
NW94_RS15470	COG0415	Belongs to the DNA photolyase family
NW94_RS15490	COG2151	metal-sulfur cluster biosynthetic enzyme
NW94_RS15530	COG3154	lipid carrier protein
NW94_RS15535	COG0826	peptidase U32
NW94_RS15540	COG0826	peptidase U32
NW94_RS15560	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NW94_RS15565	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NW94_RS15570	COG0840	transmembrane signaling receptor activity
NW94_RS15595	COG0396	ATPase activity
NW94_RS15605	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NW94_RS15610	COG0822	iron-sulfur transferase activity
NW94_RS15615	COG2151	metal-sulfur cluster biosynthetic enzyme
NW94_RS15630	COG1959	2 iron, 2 sulfur cluster binding
NW94_RS15660	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NW94_RS15670	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW94_RS15680	COG2988	succinylglutamate desuccinylase activity
NW94_RS15705	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NW94_RS15745	COG3511	phospholipase C
NW94_RS15755	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
NW94_RS15765	COG0596	Alpha beta hydrolase
NW94_RS15775	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NW94_RS15790	COG3394	polysaccharide catabolic process
NW94_RS15820	COG0683	leucine binding
NW94_RS15825	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NW94_RS15840	COG0438	transferase activity, transferring glycosyl groups
NW94_RS15845	COG1132	(ABC) transporter
NW94_RS15850	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
NW94_RS15865	COG1999	signal sequence binding
NW94_RS15880	COG2153	protein acetylation
NW94_RS15895	COG0583	DNA-binding transcription factor activity
NW94_RS15900	COG1956	GAF domain-containing protein
NW94_RS15920	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NW94_RS15940	COG2204	response regulator
NW94_RS15955	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
NW94_RS15960	COG1381	Involved in DNA repair and RecF pathway recombination
NW94_RS15965	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NW94_RS15970	COG0571	ribonuclease III activity
NW94_RS15975	COG0681	Belongs to the peptidase S26 family
NW94_RS15990	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NW94_RS15995	COG3026	antisigma factor binding
NW94_RS16015	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NW94_RS16050	COG1399	metal-binding, possibly nucleic acid-binding protein
NW94_RS16090	COG1530	ribonuclease E activity
NW94_RS16095	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NW94_RS16105	COG0303	'Molybdopterin
NW94_RS16120	COG1322	Protein conserved in bacteria
NW94_RS16140	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NW94_RS16150	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
NW94_RS16165	COG3045	CreA protein
NW94_RS16185	COG2501	S4 domain
NW94_RS16190	COG0534	Mate efflux family protein
NW94_RS16210	COG0114	fumarate hydratase activity
NW94_RS16230	COG0640	Transcriptional regulator
NW94_RS16320	COG4772	TonB-dependent receptor
NW94_RS16390	COG0583	DNA-binding transcription factor activity
NW94_RS16400	COG0308	aminopeptidase N
NW94_RS16415	COG2119	membrane
NW94_RS16425	COG0402	S-adenosylhomocysteine deaminase activity
NW94_RS16430	COG2252	PERMEase
NW94_RS16435	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NW94_RS16455	COG0154	amidase activity
NW94_RS16465	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
NW94_RS16510	COG3383	formate dehydrogenase (NAD+) activity
NW94_RS16525	COG1910	domain protein
NW94_RS16535	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NW94_RS16560	COG0546	phosphoglycolate phosphatase activity
NW94_RS16590	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NW94_RS16595	COG0077	Prephenate dehydratase
NW94_RS16595	COG1605	Chorismate mutase
NW94_RS16600	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NW94_RS16630	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
NW94_RS16640	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
NW94_RS16665	COG2951	lytic endotransglycosylase activity
NW94_RS16670	COG0123	including yeast histone deacetylase and acetoin utilization protein
NW94_RS16680	COG2267	carboxylic ester hydrolase activity
NW94_RS16690	COG2011	ABC-type metal ion transport system permease component
NW94_RS16790	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
NW94_RS16805	COG0501	Belongs to the peptidase M48B family
NW94_RS16815	COG0521	Mo-molybdopterin cofactor biosynthetic process
NW94_RS16820	COG3028	Belongs to the UPF0307 family
NW94_RS16830	COG0312	modulator of DNA gyrase
NW94_RS16840	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NW94_RS16845	COG2204	response regulator
NW94_RS16870	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NW94_RS16895	COG0728	peptidoglycan biosynthetic process
NW94_RS16915	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NW94_RS16920	COG0812	UDP-N-acetylmuramate dehydrogenase activity
NW94_RS16930	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
NW94_RS16935	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NW94_RS16940	COG0318	PFAM AMP-dependent synthetase and ligase
NW94_RS16945	COG4974	Belongs to the 'phage' integrase family
NW94_RS16955	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
NW94_RS16960	COG0802	atpase or kinase
NW94_RS16965	COG0860	N-Acetylmuramoyl-L-alanine amidase
NW94_RS16980	COG1741	Belongs to the pirin family
NW94_RS16995	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
NW94_RS17005	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NW94_RS17020	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NW94_RS17030	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NW94_RS17035	COG1522	sequence-specific DNA binding
NW94_RS17055	COG2271	Major facilitator Superfamily
NW94_RS17065	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NW94_RS17070	COG1012	belongs to the aldehyde dehydrogenase family
NW94_RS17080	COG0583	DNA-binding transcription factor activity
NW94_RS17085	COG0246	Mannitol dehydrogenase
NW94_RS17090	COG1070	Carbohydrate kinase
NW94_RS17095	COG2390	Transcriptional regulator
NW94_RS17110	COG0583	DNA-binding transcription factor activity
NW94_RS17125	COG3842	ATPase activity
NW94_RS17130	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NW94_RS17140	COG1175	transmembrane transport
NW94_RS17155	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NW94_RS17165	COG0735	belongs to the Fur family
NW94_RS17175	COG1121	(ABC) transporter
NW94_RS17180	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NW94_RS17185	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
NW94_RS17205	COG2233	PERMEase
NW94_RS17235	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NW94_RS17240	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NW94_RS17270	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NW94_RS17315	COG0009	L-threonylcarbamoyladenylate synthase
NW94_RS17320	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NW94_RS17325	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NW94_RS17330	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
NW94_RS17340	COG0469	pyruvate kinase activity
NW94_RS17350	COG0126	phosphoglycerate kinase activity
NW94_RS17375	COG0859	PFAM glycosyl transferase family 9
NW94_RS17385	COG0429	hydrolase of the alpha beta-hydrolase fold
NW94_RS17395	COG4783	chaperone-mediated protein folding
NW94_RS17435	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NW94_RS17440	COG2137	regulation of response to DNA damage stimulus
NW94_RS17455	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NW94_RS17460	COG0861	Integral membrane protein TerC family
NW94_RS17465	COG4969	Belongs to the N-Me-Phe pilin family
NW94_RS17470	COG3307	-O-antigen
NW94_RS17510	COG0840	transmembrane signaling receptor activity
NW94_RS17555	COG4948	Mandelate Racemase Muconate Lactonizing
NW94_RS17585	COG0513	Belongs to the DEAD box helicase family
NW94_RS17630	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NW94_RS17635	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NW94_RS17650	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NW94_RS17655	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NW94_RS17660	COG0367	asparagine synthase
NW94_RS17675	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NW94_RS17685	COG1396	sequence-specific DNA binding
NW94_RS17690	COG2814	Major facilitator Superfamily
NW94_RS17695	COG0583	DNA-binding transcription factor activity
NW94_RS17710	COG1702	phosphate starvation-inducible protein PhoH
NW94_RS17730	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
NW94_RS17740	COG0815	Transfers the fatty acyl group on membrane lipoproteins
NW94_RS17745	COG0752	glycyl-tRNA synthetase alpha subunit
NW94_RS17750	COG0751	glycine-tRNA ligase activity
NW94_RS17755	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NW94_RS17760	COG0204	Acyl-transferase
NW94_RS17790	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
NW94_RS17795	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NW94_RS17810	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NW94_RS17820	COG5265	(ABC) transporter
NW94_RS17840	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NW94_RS17845	COG1024	Enoyl-CoA hydratase
NW94_RS17850	COG0183	Belongs to the thiolase family
NW94_RS17855	COG1024	Enoyl-CoA hydratase
NW94_RS17855	COG1250	3-hydroxyacyl-CoA dehydrogenase
NW94_RS17860	COG1960	acyl-CoA dehydrogenase activity
NW94_RS17875	COG0494	nUDIX hydrolase
NW94_RS17945	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NW94_RS17955	COG0251	oxidation-reduction process
NW94_RS17965	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
NW94_RS17990	COG0477	Major facilitator Superfamily
NW94_RS18020	COG0708	Exodeoxyribonuclease III
NW94_RS18025	COG2326	polyphosphate kinase activity
NW94_RS18045	COG1077	Cell shape determining protein MreB Mrl
NW94_RS18060	COG0768	penicillin binding
NW94_RS18065	COG0772	Belongs to the SEDS family
NW94_RS18090	COG0720	synthase
NW94_RS18095	COG0602	queuosine metabolic process
NW94_RS18115	COG2204	response regulator
NW94_RS18120	COG5000	phosphorelay sensor kinase activity
NW94_RS18130	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NW94_RS18130	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NW94_RS18150	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NW94_RS18155	COG0242	peptide deformylase activity
NW94_RS18160	COG0758	DNA mediated transformation
NW94_RS18175	COG0583	DNA-binding transcription factor activity
NW94_RS18180	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NW94_RS18235	COG4695	Portal protein
NW94_RS18245	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NW94_RS18290	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NW94_RS18305	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NW94_RS18305	COG2169	Transcriptional regulator
NW94_RS18350	COG4695	Portal protein
NW94_RS18375	COG0583	DNA-binding transcription factor activity
NW94_RS18420	COG2169	Transcriptional regulator
NW94_RS18420	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NW94_RS18520	COG1396	sequence-specific DNA binding
NW94_RS18545	COG1309	transcriptional regulator
NW94_RS18570	COG0473	3-isopropylmalate dehydrogenase activity
NW94_RS18575	COG0583	DNA-binding transcription factor activity
NW94_RS18595	COG0625	glutathione transferase activity
NW94_RS18620	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS18630	COG0671	phosphoesterase, PA-phosphatase related
NW94_RS18690	COG1032	radical SAM domain protein
NW94_RS18705	COG0583	DNA-binding transcription factor activity
NW94_RS18710	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NW94_RS18715	COG0589	response to stress
NW94_RS18775	COG1045	serine acetyltransferase
NW94_RS18780	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS18785	COG0302	gtp cyclohydrolase
NW94_RS18805	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NW94_RS18810	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NW94_RS18815	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NW94_RS18820	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NW94_RS18895	COG1595	DNA-templated transcription, initiation
NW94_RS18900	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NW94_RS18935	COG2916	Histone family protein nucleoid-structuring protein H-NS
NW94_RS18950	COG0477	Major facilitator Superfamily
NW94_RS19120	COG0596	Alpha beta hydrolase
NW94_RS19160	COG0625	glutathione transferase activity
NW94_RS19180	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NW94_RS19185	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NW94_RS19215	COG0295	cytidine deaminase activity
NW94_RS19225	COG2823	Periplasmic or secreted lipoprotein
NW94_RS19250	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NW94_RS19255	COG0280	phosphate acetyltransferase
NW94_RS19260	COG3243	poly(R)-hydroxyalkanoic acid synthase
NW94_RS19275	COG0355	proton-transporting ATP synthase activity, rotational mechanism
NW94_RS19290	COG0356	it plays a direct role in the translocation of protons across the membrane
NW94_RS19300	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NW94_RS19300	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NW94_RS19335	COG0840	transmembrane signaling receptor activity
NW94_RS19345	COG4191	Histidine kinase
NW94_RS19345	COG0784	Response regulator, receiver
NW94_RS19350	COG0842	Transport permease protein
NW94_RS19355	COG0842	Transport permease protein
NW94_RS19355	COG1129	ABC transporter
NW94_RS19380	COG0589	response to stress
NW94_RS19395	COG1136	(ABC) transporter
NW94_RS19420	COG0840	transmembrane signaling receptor activity
NW94_RS19460	COG1611	Belongs to the LOG family
NW94_RS19495	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NW94_RS19505	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS19515	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
NW94_RS19560	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS19590	COG3537	Alpha-1,2-mannosidase
NW94_RS19625	COG0367	asparagine synthase
NW94_RS19675	COG2885	chlorophyll binding
NW94_RS19795	COG0583	DNA-binding transcription factor activity
NW94_RS19850	COG1984	allophanate hydrolase subunit 2
NW94_RS19865	COG0511	ligase activity, forming carbon-carbon bonds
NW94_RS19870	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
NW94_RS19935	COG0840	transmembrane signaling receptor activity
NW94_RS20000	COG0535	radical SAM domain protein
NW94_RS20010	COG0840	transmembrane signaling receptor activity
NW94_RS20035	COG1285	pathogenesis
NW94_RS20120	COG0346	lactoylglutathione lyase activity
NW94_RS20130	COG1562	ergosterol biosynthetic process
NW94_RS20155	COG1294	oxidase, subunit
NW94_RS20160	COG1271	oxidase subunit
NW94_RS20170	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
NW94_RS20185	COG2860	membrane
NW94_RS20190	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
NW94_RS20200	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NW94_RS20210	COG4558	Periplasmic binding protein
NW94_RS20215	COG3720	iron ion transport
NW94_RS20245	COG3842	ATPase activity
NW94_RS20250	COG1840	ABC-type Fe3 transport system, periplasmic component
NW94_RS20265	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS20275	COG0698	ribose 5-phosphate isomerase
NW94_RS20280	COG1129	ABC transporter
NW94_RS20285	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW94_RS20290	COG1879	ABC-type sugar transport system periplasmic component
NW94_RS20295	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS20300	COG1063	alcohol dehydrogenase
NW94_RS20305	COG2376	Dihydroxyacetone kinase
NW94_RS20360	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NW94_RS20395	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NW94_RS20415	COG3634	alkyl hydroperoxide reductase activity
NW94_RS20435	COG0778	Nitroreductase
NW94_RS20445	COG2308	Evidence 4 Homologs of previously reported genes of
NW94_RS20475	COG1305	Transglutaminase-like
NW94_RS20480	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW94_RS20500	COG4977	sequence-specific DNA binding
NW94_RS20510	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
NW94_RS20560	COG0531	amino acid
NW94_RS20565	COG3384	dioxygenase
NW94_RS20575	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
NW94_RS20580	COG2890	protein-(glutamine-N5) methyltransferase activity
NW94_RS20610	COG0006	proline dipeptidase activity
NW94_RS20615	COG1335	isochorismatase
NW94_RS20625	COG0488	(ABC) transporter
NW94_RS20640	COG0584	glycerophosphoryl diester phosphodiesterase
NW94_RS20675	COG0012	GTP binding
NW94_RS20705	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NW94_RS20710	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NW94_RS20725	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NW94_RS20745	COG0512	Glutamine amidotransferase of anthranilate synthase
NW94_RS20760	COG0546	phosphoglycolate phosphatase activity
NW94_RS20765	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NW94_RS20775	COG2967	ApaG domain
NW94_RS20785	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
NW94_RS20800	COG1024	Enoyl-CoA hydratase
NW94_RS20805	COG0183	Belongs to the thiolase family
NW94_RS20815	COG1024	Enoyl-CoA hydratase
NW94_RS20915	COG0798	PFAM Bile acid sodium symporter
NW94_RS20930	COG0640	Transcriptional regulator
NW94_RS20970	COG4175	Glycine betaine
NW94_RS21020	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NW94_RS21025	COG3622	Belongs to the hyi family
NW94_RS21030	COG2271	Major facilitator Superfamily
NW94_RS21035	COG0235	Class ii aldolase
NW94_RS21040	COG3395	kinase activity
NW94_RS21045	COG2084	Dehydrogenase
NW94_RS21050	COG2186	Transcriptional regulator
NW94_RS21090	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS21135	COG0583	DNA-binding transcription factor activity
NW94_RS21160	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS21175	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NW94_RS21180	COG2508	Transcriptional regulator
NW94_RS21220	COG0038	chloride channel
NW94_RS21235	COG1858	cytochrome C peroxidase
NW94_RS21240	COG3511	phospholipase C
NW94_RS21265	COG2197	response regulator
NW94_RS21345	COG1024	Enoyl-CoA hydratase
NW94_RS21350	COG1012	belongs to the aldehyde dehydrogenase family
NW94_RS21360	COG2814	Major facilitator Superfamily
NW94_RS21375	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS21400	COG1129	ABC transporter
NW94_RS21405	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW94_RS21415	COG2721	sulfolactate sulfo-lyase activity
NW94_RS21430	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS21440	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS21500	COG5295	Hep Hag repeat protein
NW94_RS21500	COG5295	Hep Hag repeat protein
NW94_RS21510	COG2916	Histone family protein nucleoid-structuring protein H-NS
NW94_RS21565	COG1272	protein, Hemolysin III
NW94_RS21585	COG1522	sequence-specific DNA binding
NW94_RS21600	COG1448	Aminotransferase
NW94_RS21655	COG4191	Histidine kinase
NW94_RS21655	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW94_RS21660	COG2201	protein-glutamate methylesterase activity
NW94_RS21675	COG2373	Large extracellular alpha-helical protein
NW94_RS21710	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NW94_RS21725	COG2175	clavaminate synthase activity
NW94_RS21730	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NW94_RS21750	COG3291	Pkd domain containing protein
NW94_RS21765	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NW94_RS21830	COG0589	response to stress
NW94_RS21865	COG4221	oxidoreductase activity
NW94_RS21880	COG1113	amino acid transport
NW94_RS21895	COG2916	Histone family protein nucleoid-structuring protein H-NS
NW94_RS21950	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NW94_RS21955	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NW94_RS21960	COG2271	Major facilitator Superfamily
NW94_RS21985	COG1176	ABC-type spermidine putrescine transport system, permease component I
NW94_RS22000	COG1012	belongs to the aldehyde dehydrogenase family
NW94_RS22075	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
NW94_RS22080	COG0667	Aldo Keto reductase
NW94_RS22085	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS22100	COG0556	nucleotide-excision repair
NW94_RS22110	COG4633	Protein conserved in bacteria
NW94_RS22115	COG0672	)-iron permease
NW94_RS22125	COG3193	protein, possibly involved in utilization of glycolate and propanediol
NW94_RS22175	COG0583	DNA-binding transcription factor activity
NW94_RS22220	COG1012	belongs to the aldehyde dehydrogenase family
NW94_RS22225	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NW94_RS22230	COG0531	amino acid
NW94_RS22245	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS22265	COG1902	pentaerythritol trinitrate reductase activity
NW94_RS22280	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS22285	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NW94_RS22300	COG0517	IMP dehydrogenase activity
NW94_RS22300	COG0516	GMP reductase activity
NW94_RS22305	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NW94_RS22330	COG2197	response regulator
NW94_RS22335	COG1285	pathogenesis
NW94_RS22345	COG1408	metallophosphoesterase
NW94_RS22360	COG1414	Transcriptional regulator
NW94_RS22365	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS22375	COG2146	nitrite reductase [NAD(P)H] activity
NW94_RS22405	COG1414	Transcriptional regulator
NW94_RS22410	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS22415	COG0028	Belongs to the TPP enzyme family
NW94_RS22425	COG1012	belongs to the aldehyde dehydrogenase family
NW94_RS22440	COG0477	Major facilitator Superfamily
NW94_RS22470	COG0154	amidase activity
NW94_RS22480	COG1522	sequence-specific DNA binding
NW94_RS22530	COG0492	ferredoxin-NADP+ reductase activity
NW94_RS22555	COG0596	Alpha beta hydrolase
NW94_RS22585	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NW94_RS22610	COG0840	transmembrane signaling receptor activity
NW94_RS22615	COG0840	transmembrane signaling receptor activity
NW94_RS22645	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NW94_RS22650	COG0596	Alpha beta hydrolase
NW94_RS22695	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS22735	COG0583	DNA-binding transcription factor activity
NW94_RS22760	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NW94_RS22765	COG0601	transmembrane transport
NW94_RS22775	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
NW94_RS22810	COG3209	COG3209 Rhs family protein
NW94_RS22855	COG2140	Oxalate decarboxylase
NW94_RS22860	COG1914	H( )-stimulated, divalent metal cation uptake system
NW94_RS22870	COG4682	membrane
NW94_RS22875	COG3781	membrane
NW94_RS22880	COG0243	molybdopterin cofactor binding
NW94_RS22885	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW94_RS22910	COG1404	Belongs to the peptidase S8 family
NW94_RS22935	COG2259	Doxx family
NW94_RS22960	COG4160	amino acid transport
NW94_RS22965	COG4598	ABC transporter
NW94_RS22970	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NW94_RS23035	COG3275	phosphorelay sensor kinase activity
NW94_RS23155	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NW94_RS23160	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NW94_RS23175	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NW94_RS23190	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
NW94_RS23225	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS23230	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NW94_RS23230	COG4651	solute:proton antiporter activity
NW94_RS23285	COG1349	DNA-binding transcription factor activity
NW94_RS23290	COG2223	nitrite transmembrane transporter activity
NW94_RS23335	COG1063	alcohol dehydrogenase
NW94_RS23340	COG3842	ATPase activity
NW94_RS23350	COG1070	Carbohydrate kinase
NW94_RS23375	COG0243	molybdopterin cofactor binding
NW94_RS23380	COG2146	nitrite reductase [NAD(P)H] activity
NW94_RS23385	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NW94_RS23410	COG3707	response regulator
NW94_RS23415	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NW94_RS23415	COG1116	anion transmembrane transporter activity
NW94_RS23425	COG0302	gtp cyclohydrolase
NW94_RS23465	COG0477	Major facilitator Superfamily
NW94_RS23520	COG2130	NADP-dependent
NW94_RS23525	COG1979	alcohol dehydrogenase
NW94_RS23590	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NW94_RS23605	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
NW94_RS23605	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NW94_RS23605	COG3321	synthase
NW94_RS23605	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NW94_RS23630	COG0531	amino acid
NW94_RS23660	COG4122	O-methyltransferase activity
NW94_RS23670	COG3706	GGDEF domain
NW94_RS23670	COG2203	Gaf domain
NW94_RS23670	COG5001	Diguanylate cyclase
NW94_RS23670	COG4251	negative regulation of phosphorylation
NW94_RS23685	COG0583	DNA-binding transcription factor activity
NW94_RS23690	COG3485	protocatechuate 3,4-dioxygenase
NW94_RS23695	COG3485	protocatechuate 3,4-dioxygenase
NW94_RS23715	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NW94_RS23720	COG0601	transmembrane transport
NW94_RS23725	COG0747	negative chemotaxis
NW94_RS23735	COG4172	Belongs to the ABC transporter superfamily
NW94_RS23740	COG1446	asparaginase
NW94_RS23750	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NW94_RS23795	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NW94_RS23805	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NW94_RS23815	COG0277	FAD linked oxidase domain protein
NW94_RS23870	COG2188	Transcriptional regulator
NW94_RS23875	COG2814	Major facilitator Superfamily
NW94_RS23890	COG1858	cytochrome C peroxidase
NW94_RS23895	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
NW94_RS23920	COG0456	acetyltransferase
NW94_RS23930	COG2391	methyltransferase activity
NW94_RS23935	COG0640	Transcriptional regulator
NW94_RS23945	COG3038	cytochrome b561
NW94_RS23955	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NW94_RS23960	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NW94_RS23970	COG1045	serine acetyltransferase
NW94_RS23985	COG1505	serine-type exopeptidase activity
NW94_RS24005	COG1566	PFAM secretion protein HlyD family protein
NW94_RS24065	COG0531	amino acid
NW94_RS24085	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NW94_RS24090	COG4122	O-methyltransferase activity
NW94_RS24100	COG3706	GGDEF domain
NW94_RS24100	COG2203	Gaf domain
NW94_RS24100	COG4251	negative regulation of phosphorylation
NW94_RS24100	COG5001	Diguanylate cyclase
NW94_RS24115	COG0583	DNA-binding transcription factor activity
NW94_RS24120	COG3485	protocatechuate 3,4-dioxygenase
NW94_RS24125	COG3485	protocatechuate 3,4-dioxygenase
NW94_RS24145	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NW94_RS24150	COG0601	transmembrane transport
NW94_RS24155	COG0747	negative chemotaxis
NW94_RS24165	COG4172	Belongs to the ABC transporter superfamily
NW94_RS24170	COG1446	asparaginase
NW94_RS24180	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NW94_RS24225	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NW94_RS24235	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NW94_RS24245	COG0277	FAD linked oxidase domain protein
NW94_RS24300	COG2188	Transcriptional regulator
NW94_RS24305	COG2814	Major facilitator Superfamily
NW94_RS24320	COG1858	cytochrome C peroxidase
NW94_RS24325	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
NW94_RS24350	COG0456	acetyltransferase
NW94_RS24360	COG2391	methyltransferase activity
NW94_RS24365	COG0640	Transcriptional regulator
NW94_RS24375	COG3038	cytochrome b561
NW94_RS24385	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NW94_RS24390	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NW94_RS24400	COG1045	serine acetyltransferase
NW94_RS24415	COG1505	serine-type exopeptidase activity
NW94_RS24435	COG1566	PFAM secretion protein HlyD family protein
NW94_RS24495	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
NW94_RS24520	COG0477	Major facilitator Superfamily
NW94_RS24530	COG0784	Response regulator, receiver
NW94_RS24535	COG4251	negative regulation of phosphorylation
NW94_RS24550	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NW94_RS24580	COG1278	Cold shock
NW94_RS24620	COG0446	pyridine nucleotide-disulphide oxidoreductase
NW94_RS24620	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NW94_RS24720	COG1215	transferase activity, transferring glycosyl groups
NW94_RS24740	COG0318	PFAM AMP-dependent synthetase and ligase
NW94_RS24780	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS24790	COG0628	permease
NW94_RS24800	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
NW94_RS24815	COG1902	pentaerythritol trinitrate reductase activity
NW94_RS24835	COG1309	transcriptional regulator
NW94_RS24865	COG0642	Histidine kinase
NW94_RS24885	COG3842	ATPase activity
NW94_RS24900	COG2207	Transcriptional regulator
NW94_RS24910	COG3971	2-oxopent-4-enoate hydratase activity
NW94_RS24920	COG3384	dioxygenase
NW94_RS24925	COG1012	belongs to the aldehyde dehydrogenase family
NW94_RS24940	COG1846	Transcriptional regulator
NW94_RS24955	COG0745	RESPONSE REGULATOR receiver
NW94_RS24960	COG2205	protein histidine kinase activity
NW94_RS25015	COG2207	Transcriptional regulator
NW94_RS25075	COG1845	cytochrome c oxidase, subunit III
NW94_RS25095	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
NW94_RS25105	COG0477	Major facilitator Superfamily
NW94_RS25115	COG3214	Protein conserved in bacteria
NW94_RS25210	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NW94_RS25240	COG0642	Histidine kinase
NW94_RS25320	COG2205	protein histidine kinase activity
NW94_RS25325	COG0745	RESPONSE REGULATOR receiver
NW94_RS25335	COG2066	Belongs to the glutaminase family
NW94_RS25355	COG5295	Hep Hag repeat protein
NW94_RS25395	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NW94_RS25400	COG1960	acyl-CoA dehydrogenase activity
NW94_RS25445	COG4638	Rieske (2fe-2S)
NW94_RS25525	COG1477	protein flavinylation
NW94_RS25530	COG1012	belongs to the aldehyde dehydrogenase family
NW94_RS25535	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW94_RS25550	COG0583	DNA-binding transcription factor activity
NW94_RS25565	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NW94_RS25590	COG1349	DNA-binding transcription factor activity
NW94_RS25600	COG2271	Major facilitator Superfamily
NW94_RS25610	COG0246	Mannitol dehydrogenase
NW94_RS25620	COG4948	Mandelate Racemase Muconate Lactonizing
NW94_RS25625	COG1063	alcohol dehydrogenase
NW94_RS25660	COG5441	Belongs to the UPF0261 family
NW94_RS25665	COG5564	TIM-barrel signal transduction protein
NW94_RS25700	COG3023	N-Acetylmuramoyl-L-alanine amidase
NW94_RS25710	COG5295	Hep Hag repeat protein
NW94_RS25845	COG0302	gtp cyclohydrolase
NW94_RS25890	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NW94_RS25905	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NW94_RS25915	COG0531	amino acid
NW94_RS25925	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
NW94_RS25950	COG2259	Doxx family
NW94_RS25960	COG1620	l-lactate permease
NW94_RS25965	COG1556	Lactate utilization protein
NW94_RS25970	COG1139	Iron-sulfur cluster binding protein
NW94_RS25975	COG0247	lactate metabolic process
NW94_RS25980	COG2186	Transcriptional regulator
NW94_RS26010	COG2011	ABC-type metal ion transport system permease component
NW94_RS26015	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NW94_RS26035	COG2197	response regulator
NW94_RS26090	COG3321	synthase
NW94_RS26090	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NW94_RS26090	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NW94_RS26090	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS26090	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NW94_RS26105	COG0019	diaminopimelate decarboxylase activity
NW94_RS26110	COG0318	PFAM AMP-dependent synthetase and ligase
NW94_RS26155	COG1301	dicarboxylic acid transport
NW94_RS26170	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NW94_RS26175	COG0657	acetylesterase activity
NW94_RS26180	COG0583	DNA-binding transcription factor activity
NW94_RS26220	COG0709	Synthesizes selenophosphate from selenide and ATP
NW94_RS26250	COG1414	Transcriptional regulator
NW94_RS26255	COG1288	antiporter activity
NW94_RS26265	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NW94_RS26310	COG0840	transmembrane signaling receptor activity
NW94_RS26325	COG0183	Belongs to the thiolase family
NW94_RS26335	COG1414	Transcriptional regulator
NW94_RS26340	COG1309	transcriptional regulator
NW94_RS26360	COG1473	amidohydrolase
NW94_RS26365	COG0583	DNA-binding transcription factor activity
NW94_RS26520	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NW94_RS26535	COG2916	Histone family protein nucleoid-structuring protein H-NS
NW94_RS26570	COG4790	Type iii secretion
NW94_RS26715	COG0477	Major facilitator Superfamily
NW94_RS26745	COG1280	lysine exporter protein (LysE YggA)
NW94_RS26750	COG1522	sequence-specific DNA binding
NW94_RS26765	COG0306	phosphate transporter
NW94_RS26790	COG0318	PFAM AMP-dependent synthetase and ligase
NW94_RS26830	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NW94_RS26840	COG4521	taurine ABC transporter
NW94_RS26845	COG2175	clavaminate synthase activity
NW94_RS26855	COG2194	sulfuric ester hydrolase activity
NW94_RS26860	COG1215	transferase activity, transferring glycosyl groups
NW94_RS26880	COG0457	Tetratricopeptide repeat
NW94_RS26885	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
NW94_RS26890	COG1215	transferase activity, transferring glycosyl groups
NW94_RS26905	COG3550	peptidyl-serine autophosphorylation
NW94_RS27035	COG1450	Type ii and iii secretion system protein
NW94_RS27080	COG2207	Transcriptional regulator
NW94_RS27115	COG4794	Type iii secretion
NW94_RS27130	COG4789	Type iii secretion
NW94_RS27135	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NW94_RS27245	COG0028	Belongs to the TPP enzyme family
NW94_RS27250	COG0427	acetyl-CoA hydrolase
NW94_RS27255	COG2030	dehydratase
NW94_RS27265	COG0583	DNA-binding transcription factor activity
NW94_RS27285	COG2814	Major facilitator Superfamily
NW94_RS27295	COG4191	Histidine kinase
NW94_RS27335	COG3621	Patatin-like phospholipase
NW94_RS27375	COG1472	Belongs to the glycosyl hydrolase 3 family
NW94_RS27380	COG1472	Belongs to the glycosyl hydrolase 3 family
NW94_RS27390	COG0154	amidase activity
NW94_RS27410	COG3276	selenocysteine insertion sequence binding
NW94_RS27415	COG1921	L-seryl-tRNASec selenium transferase activity
NW94_RS27425	COG2864	formate dehydrogenase
NW94_RS27430	COG0437	4 iron, 4 sulfur cluster binding
NW94_RS27455	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW94_RS27465	COG1126	abc transporter atp-binding protein
NW94_RS27470	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NW94_RS27475	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NW94_RS27485	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW94_RS27500	COG3608	succinylglutamate desuccinylase aspartoacylase
NW94_RS27520	COG1295	ribonuclease BN
NW94_RS27525	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS27545	COG2755	lipolytic protein G-D-S-L family
NW94_RS27545	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NW94_RS27555	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NW94_RS27570	COG0438	transferase activity, transferring glycosyl groups
NW94_RS27590	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NW94_RS27590	COG2755	lipolytic protein G-D-S-L family
NW94_RS27595	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
NW94_RS27640	COG0285	dihydrofolate synthase activity
NW94_RS27645	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NW94_RS27660	COG0133	tryptophan synthase activity
NW94_RS27665	COG0135	phosphoribosylanthranilate isomerase activity
NW94_RS27720	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NW94_RS27745	COG1522	sequence-specific DNA binding
NW94_RS27790	COG0372	Belongs to the citrate synthase family
NW94_RS27795	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
NW94_RS27800	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NW94_RS27805	COG1053	succinate dehydrogenase
NW94_RS27815	COG2009	succinate dehydrogenase
NW94_RS27825	COG2188	Transcriptional regulator
NW94_RS27850	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NW94_RS27855	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
NW94_RS27855	COG3210	domain, Protein
NW94_RS27855	COG3064	Membrane
NW94_RS27860	COG2831	hemolysin activation secretion protein
NW94_RS27885	COG1176	ABC-type spermidine putrescine transport system, permease component I
NW94_RS27895	COG3842	ATPase activity
NW94_RS27915	COG4771	TonB-dependent receptor
NW94_RS27925	COG3038	cytochrome b561
NW94_RS27970	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NW94_RS27975	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NW94_RS28145	COG0583	DNA-binding transcription factor activity
NW94_RS28170	COG0477	Major facilitator Superfamily
NW94_RS28175	COG1104	cysteine desulfurase activity
NW94_RS28190	COG0477	Major facilitator Superfamily
NW94_RS28200	COG0583	DNA-binding transcription factor activity
NW94_RS28210	COG0179	Fumarylacetoacetate (FAA) hydrolase
NW94_RS28255	COG2916	Histone family protein nucleoid-structuring protein H-NS
NW94_RS28275	COG2610	gluconate transmembrane transporter activity
NW94_RS28320	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NW94_RS28325	COG0601	transmembrane transport
NW94_RS28350	COG3104	oligopeptide transport
NW94_RS28395	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NW94_RS28420	COG2081	HI0933 family
NW94_RS28425	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NW94_RS28445	COG0142	geranyltranstransferase activity
NW94_RS28470	COG0412	Dienelactone hydrolase
NW94_RS28490	COG1252	NADH dehydrogenase
NW94_RS28500	COG1611	Belongs to the LOG family
NW94_RS28520	COG1683	Conserved Protein
NW94_RS28560	COG4695	Portal protein
NW94_RS28570	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NW94_RS28595	COG1846	Transcriptional regulator
NW94_RS28600	COG1764	response to oxidative stress
NW94_RS28620	COG0725	ABC transporter, periplasmic molybdate-binding protein
NW94_RS28625	COG4149	molybdate abc transporter
NW94_RS28665	COG0583	DNA-binding transcription factor activity
NW94_RS28680	COG1253	flavin adenine dinucleotide binding
NW94_RS28685	COG0352	thiamine-phosphate diphosphorylase activity
NW94_RS28690	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NW94_RS28710	COG1304	FMN binding
NW94_RS28780	COG0247	lactate metabolic process
NW94_RS28785	COG1592	Rubrerythrin
NW94_RS28795	COG3023	N-Acetylmuramoyl-L-alanine amidase
NW94_RS28810	COG4941	Belongs to the sigma-70 factor family
NW94_RS28820	COG3795	YCII-related domain
NW94_RS28825	COG3795	YCII-related domain
NW94_RS28860	COG0628	permease
NW94_RS28895	COG2130	NADP-dependent
NW94_RS28920	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS28950	COG0583	DNA-binding transcription factor activity
NW94_RS28980	COG2837	iron assimilation
NW94_RS28990	COG5265	(ABC) transporter
NW94_RS29000	COG4977	sequence-specific DNA binding
NW94_RS29035	COG0038	chloride channel
NW94_RS29075	COG0840	transmembrane signaling receptor activity
NW94_RS29080	COG0642	Histidine kinase
NW94_RS29095	COG1012	belongs to the aldehyde dehydrogenase family
NW94_RS29105	COG0025	NhaP-type Na H and K H
NW94_RS29125	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NW94_RS29140	COG2146	nitrite reductase [NAD(P)H] activity
NW94_RS29145	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
NW94_RS29150	COG4638	Rieske (2fe-2S)
NW94_RS29180	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NW94_RS29205	COG0446	pyridine nucleotide-disulphide oxidoreductase
NW94_RS29205	COG1902	pentaerythritol trinitrate reductase activity
NW94_RS29225	COG0583	DNA-binding transcription factor activity
NW94_RS29230	COG4638	Rieske (2fe-2S)
NW94_RS29235	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
NW94_RS29240	COG0633	Ferredoxin
NW94_RS29240	COG0543	2 iron, 2 sulfur cluster binding
NW94_RS29245	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS29265	COG1335	isochorismatase
NW94_RS29370	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NW94_RS29400	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NW94_RS29420	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NW94_RS29450	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS29475	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS29485	COG0438	transferase activity, transferring glycosyl groups
NW94_RS29495	COG0784	Response regulator, receiver
NW94_RS29495	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW94_RS29495	COG2198	Histidine kinase
NW94_RS29495	COG2205	protein histidine kinase activity
NW94_RS29510	COG2204	response regulator
NW94_RS29545	COG2192	nodulation
NW94_RS29550	COG0859	PFAM glycosyl transferase family 9
NW94_RS29555	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NW94_RS29560	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS29570	COG5265	(ABC) transporter
NW94_RS29585	COG0688	phosphatidylethanolamine metabolic process
NW94_RS29590	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NW94_RS29605	COG2084	Dehydrogenase
NW94_RS29610	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NW94_RS29620	COG2091	lysine biosynthetic process via aminoadipic acid
NW94_RS29640	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NW94_RS29670	COG0022	dehydrogenase e1 component
NW94_RS29730	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NW94_RS29790	COG2239	Acts as a magnesium transporter
NW94_RS29805	COG0071	Belongs to the small heat shock protein (HSP20) family
NW94_RS29845	COG2175	clavaminate synthase activity
NW94_RS29850	COG3246	L-lysine catabolic process to acetate
NW94_RS29865	COG0243	molybdopterin cofactor binding
NW94_RS29870	COG0437	4 iron, 4 sulfur cluster binding
NW94_RS29875	COG3302	dmso reductase anchor subunit
NW94_RS29945	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW94_RS29955	COG0154	amidase activity
NW94_RS29975	COG0456	acetyltransferase
NW94_RS29975	COG0454	-acetyltransferase
NW94_RS29995	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NW94_RS30065	COG3447	MASE1 domain protein
NW94_RS30065	COG5001	Diguanylate cyclase
NW94_RS30065	COG5002	protein histidine kinase activity
NW94_RS30110	COG1136	(ABC) transporter
NW94_RS30115	COG2072	flavoprotein involved in K transport
NW94_RS30125	COG1028	Short-chain dehydrogenase reductase Sdr
NW94_RS30150	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NW94_RS30160	COG1126	abc transporter atp-binding protein
NW94_RS30165	COG0765	amino acid transport
NW94_RS30170	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW94_RS30185	COG1657	PFAM Prenyltransferase squalene oxidase
NW94_RS30195	COG1562	ergosterol biosynthetic process
NW94_RS30240	COG1595	DNA-templated transcription, initiation
NW94_RS30250	COG1393	Belongs to the ArsC family
NW94_RS30255	COG1192	Involved in chromosome partitioning