locus-tag	class	description
NW96_RS00010	COG0592	DNA-directed DNA polymerase activity
NW96_RS00030	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NW96_RS00115	COG0235	Class ii aldolase
NW96_RS00130	COG5001	Diguanylate cyclase
NW96_RS00130	COG5002	protein histidine kinase activity
NW96_RS00175	COG2204	response regulator
NW96_RS00195	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NW96_RS00205	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NW96_RS00225	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
NW96_RS00230	COG1596	polysaccharide export
NW96_RS00270	COG4977	sequence-specific DNA binding
NW96_RS00270	COG1917	Cupin 2, conserved barrel domain protein
NW96_RS00275	COG0625	glutathione transferase activity
NW96_RS00280	COG0625	glutathione transferase activity
NW96_RS00295	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NW96_RS00305	COG0588	phosphoglycerate mutase activity
NW96_RS00345	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
NW96_RS00350	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NW96_RS00355	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NW96_RS00360	COG0006	proline dipeptidase activity
NW96_RS00370	COG0625	glutathione transferase activity
NW96_RS00380	COG0069	glutamate synthase activity
NW96_RS00470	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NW96_RS00470	COG3008	intermembrane lipid transfer
NW96_RS00475	COG2995	paraquat-inducible protein a
NW96_RS00495	COG2353	YceI-like domain
NW96_RS00500	COG2353	YceI-like domain
NW96_RS00515	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NW96_RS00520	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
NW96_RS00525	COG1862	Preprotein translocase
NW96_RS00530	COG0343	queuine tRNA-ribosyltransferase activity
NW96_RS00545	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NW96_RS00570	COG0783	Belongs to the Dps family
NW96_RS00595	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
NW96_RS00600	COG2188	Transcriptional regulator
NW96_RS00610	COG3624	Phosphonate C-P lyase system protein PhnG
NW96_RS00620	COG3626	phosphonate metabolism
NW96_RS00625	COG3627	carbon phosphorus lyase activity
NW96_RS00630	COG4107	phosphonate C-P lyase system protein PhnK
NW96_RS00635	COG4778	phosphonate C-P lyase system protein PhnL
NW96_RS00640	COG3454	Phosphonate metabolism
NW96_RS00645	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
NW96_RS00655	COG3639	organic phosphonate transmembrane transporter activity
NW96_RS00680	COG0247	lactate metabolic process
NW96_RS00685	COG0277	FAD linked oxidase domain protein
NW96_RS00690	COG0277	FAD linked oxidase domain protein
NW96_RS00695	COG0277	FAD linked oxidase domain protein
NW96_RS00700	COG2096	Adenosyltransferase
NW96_RS00705	COG1017	nitric oxide dioxygenase activity
NW96_RS00705	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NW96_RS00730	COG0418	dihydroorotase activity
NW96_RS00740	COG0121	glutamine amidotransferase
NW96_RS00790	COG1126	abc transporter atp-binding protein
NW96_RS00795	COG0765	amino acid transport
NW96_RS00800	COG0765	amino acid transport
NW96_RS00805	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW96_RS00810	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
NW96_RS00820	COG0583	DNA-binding transcription factor activity
NW96_RS00825	COG2223	nitrite transmembrane transporter activity
NW96_RS00850	COG0800	Aldolase
NW96_RS00865	COG1737	Transcriptional regulator
NW96_RS00875	COG1981	membrane
NW96_RS00880	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NW96_RS00885	COG1466	dna polymerase III delta subunit
NW96_RS00915	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NW96_RS00920	COG0735	belongs to the Fur family
NW96_RS00930	COG4266	Belongs to the allantoicase family
NW96_RS00945	COG0629	single-stranded DNA binding
NW96_RS00950	COG2814	Major facilitator Superfamily
NW96_RS00985	COG1280	lysine exporter protein (LysE YggA)
NW96_RS01010	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
NW96_RS01025	COG1137	ATPase activity
NW96_RS01030	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
NW96_RS01040	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NW96_RS01065	COG1194	a g-specific adenine glycosylase
NW96_RS01080	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
NW96_RS01095	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NW96_RS01110	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NW96_RS01115	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
NW96_RS01130	COG0742	ribosomal rna small subunit methyltransferase
NW96_RS01140	COG0625	glutathione transferase activity
NW96_RS01150	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NW96_RS01160	COG0243	molybdopterin cofactor binding
NW96_RS01165	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NW96_RS01180	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NW96_RS01190	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
NW96_RS01200	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NW96_RS01225	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
NW96_RS01240	COG0587	DNA-directed DNA polymerase activity
NW96_RS01250	COG2814	Major facilitator Superfamily
NW96_RS01285	COG2226	methyltransferase
NW96_RS01295	COG1960	acyl-CoA dehydrogenase activity
NW96_RS01350	COG0583	DNA-binding transcription factor activity
NW96_RS01360	COG2188	Transcriptional regulator
NW96_RS01365	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
NW96_RS01370	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NW96_RS01375	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NW96_RS01375	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
NW96_RS01380	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
NW96_RS01380	COG1263	PTS System
NW96_RS01380	COG2190	(PTS) system
NW96_RS01405	COG1294	oxidase, subunit
NW96_RS01435	COG0531	amino acid
NW96_RS01455	COG0668	transmembrane transport
NW96_RS01475	COG0789	Transcriptional regulator
NW96_RS01485	COG0277	FAD linked oxidase domain protein
NW96_RS01505	COG0436	Aminotransferase
NW96_RS01525	COG1960	acyl-CoA dehydrogenase activity
NW96_RS01540	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
NW96_RS01540	COG0506	proline dehydrogenase activity
NW96_RS01540	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
NW96_RS01560	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NW96_RS01580	COG1832	CoA-binding protein
NW96_RS01600	COG0318	PFAM AMP-dependent synthetase and ligase
NW96_RS01640	COG0356	it plays a direct role in the translocation of protons across the membrane
NW96_RS01655	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
NW96_RS01660	COG1475	DNA binding
NW96_RS01665	COG1192	Involved in chromosome partitioning
NW96_RS01710	COG0559	Belongs to the binding-protein-dependent transport system permease family
NW96_RS01740	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
NW96_RS01750	COG0583	DNA-binding transcription factor activity
NW96_RS01765	COG1522	sequence-specific DNA binding
NW96_RS01770	COG3186	Phenylalanine-4-hydroxylase
NW96_RS01790	COG0642	Histidine kinase
NW96_RS01810	COG1902	pentaerythritol trinitrate reductase activity
NW96_RS01815	COG0518	GMP synthase (glutamine-hydrolyzing) activity
NW96_RS01815	COG0519	Catalyzes the synthesis of GMP from XMP
NW96_RS01875	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NW96_RS01885	COG1522	sequence-specific DNA binding
NW96_RS01890	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NW96_RS01940	COG3397	chitin binding
NW96_RS01965	COG2267	carboxylic ester hydrolase activity
NW96_RS02010	COG1280	lysine exporter protein (LysE YggA)
NW96_RS02040	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS02055	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NW96_RS02100	COG0519	Catalyzes the synthesis of GMP from XMP
NW96_RS02110	COG0561	phosphatase activity
NW96_RS02115	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NW96_RS02135	COG0438	transferase activity, transferring glycosyl groups
NW96_RS02165	COG2201	protein-glutamate methylesterase activity
NW96_RS02185	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
NW96_RS02195	COG2201	protein-glutamate methylesterase activity
NW96_RS02205	COG0745	RESPONSE REGULATOR receiver
NW96_RS02210	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
NW96_RS02230	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NW96_RS02235	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NW96_RS02265	COG1950	PFAM Membrane protein of
NW96_RS02270	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
NW96_RS02400	COG0308	aminopeptidase N
NW96_RS02480	COG0443	Heat shock 70 kDa protein
NW96_RS02505	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
NW96_RS02510	COG2823	Periplasmic or secreted lipoprotein
NW96_RS02525	COG1113	amino acid transport
NW96_RS02545	COG1278	Cold shock
NW96_RS02590	COG0232	Belongs to the dGTPase family. Type 2 subfamily
NW96_RS02600	COG1175	transmembrane transport
NW96_RS02605	COG0395	ABC-type sugar transport system, permease component
NW96_RS02610	COG3842	ATPase activity
NW96_RS02615	COG0584	glycerophosphoryl diester phosphodiesterase
NW96_RS02630	COG0067	glutamate synthase
NW96_RS02630	COG0069	glutamate synthase activity
NW96_RS02630	COG0070	glutamate synthase
NW96_RS02645	COG1115	amino acid carrier protein
NW96_RS02655	COG4178	(ABC) transporter
NW96_RS02680	COG1127	ABC transporter
NW96_RS02685	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NW96_RS02690	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
NW96_RS02715	COG1131	(ABC) transporter
NW96_RS02720	COG0842	Transport permease protein
NW96_RS02730	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NW96_RS02740	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NW96_RS02745	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NW96_RS02755	COG2095	MarC family integral membrane protein
NW96_RS02800	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
NW96_RS02805	COG0805	protein transport
NW96_RS02815	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NW96_RS02820	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NW96_RS02825	COG0723	plastoquinol--plastocyanin reductase activity
NW96_RS02830	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
NW96_RS02835	COG2857	Cytochrome c1
NW96_RS02840	COG0625	glutathione transferase activity
NW96_RS02845	COG2969	positive regulation of protein catabolic process
NW96_RS02860	COG4695	Portal protein
NW96_RS02865	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NW96_RS02870	COG3657	addiction module killer protein
NW96_RS02885	COG1987	bacterial-type flagellum assembly
NW96_RS02895	COG0789	Transcriptional regulator
NW96_RS02900	COG4106	trans-aconitate 2-methyltransferase activity
NW96_RS02900	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
NW96_RS02910	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NW96_RS02920	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NW96_RS02935	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS02960	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS03035	COG1695	Transcriptional regulator
NW96_RS03075	COG1960	acyl-CoA dehydrogenase activity
NW96_RS03085	COG0183	Belongs to the thiolase family
NW96_RS03090	COG1250	3-hydroxyacyl-CoA dehydrogenase
NW96_RS03090	COG1024	Enoyl-CoA hydratase
NW96_RS03100	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NW96_RS03140	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
NW96_RS03160	COG1346	cytolysis
NW96_RS03170	COG0583	DNA-binding transcription factor activity
NW96_RS03180	COG1846	Transcriptional regulator
NW96_RS03225	COG2165	general secretion pathway protein
NW96_RS03245	COG1459	type II secretion system
NW96_RS03270	COG0523	cobalamin synthesis protein
NW96_RS03305	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
NW96_RS03310	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NW96_RS03345	COG0583	DNA-binding transcription factor activity
NW96_RS03375	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NW96_RS03380	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NW96_RS03390	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NW96_RS03420	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NW96_RS03425	COG1546	Belongs to the CinA family
NW96_RS03430	COG0284	orotidine-5'-phosphate decarboxylase activity
NW96_RS03440	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS03445	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW96_RS03450	COG1129	ABC transporter
NW96_RS03460	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS03470	COG3734	2-keto-3-deoxy-galactonokinase
NW96_RS03475	COG1414	Transcriptional regulator
NW96_RS03495	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NW96_RS03500	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NW96_RS03505	COG0557	exoribonuclease II activity
NW96_RS03510	COG3150	esterase
NW96_RS03515	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NW96_RS03525	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NW96_RS03530	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NW96_RS03535	COG0511	ligase activity, forming carbon-carbon bonds
NW96_RS03540	COG0439	Biotin carboxylase
NW96_RS03555	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NW96_RS03560	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NW96_RS03615	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NW96_RS03620	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
NW96_RS03625	COG2095	MarC family integral membrane protein
NW96_RS03660	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
NW96_RS03665	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NW96_RS03700	COG0583	DNA-binding transcription factor activity
NW96_RS03735	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NW96_RS03745	COG1385	rRNA (uridine-N3-)-methyltransferase activity
NW96_RS03775	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
NW96_RS03780	COG1546	Belongs to the CinA family
NW96_RS03785	COG0284	orotidine-5'-phosphate decarboxylase activity
NW96_RS03795	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS03800	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW96_RS03805	COG1129	ABC transporter
NW96_RS03815	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS03825	COG3734	2-keto-3-deoxy-galactonokinase
NW96_RS03830	COG1414	Transcriptional regulator
NW96_RS03850	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
NW96_RS03855	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NW96_RS03860	COG0557	exoribonuclease II activity
NW96_RS03865	COG3150	esterase
NW96_RS03870	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
NW96_RS03880	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NW96_RS03885	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NW96_RS03890	COG0511	ligase activity, forming carbon-carbon bonds
NW96_RS03895	COG0439	Biotin carboxylase
NW96_RS03910	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NW96_RS03915	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NW96_RS03975	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
NW96_RS03980	COG2095	MarC family integral membrane protein
NW96_RS04030	COG0142	geranyltranstransferase activity
NW96_RS04055	COG4536	flavin adenine dinucleotide binding
NW96_RS04060	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
NW96_RS04070	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
NW96_RS04085	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
NW96_RS04090	COG0494	nUDIX hydrolase
NW96_RS04100	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NW96_RS04125	COG0678	peroxiredoxin activity
NW96_RS04145	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
NW96_RS04180	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
NW96_RS04185	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NW96_RS04195	COG3116	cell division
NW96_RS04215	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS04265	COG1024	Enoyl-CoA hydratase
NW96_RS04290	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
NW96_RS04300	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
NW96_RS04315	COG0737	Belongs to the 5'-nucleotidase family
NW96_RS04320	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
NW96_RS04325	COG1127	ABC transporter
NW96_RS04360	COG1686	Belongs to the peptidase S11 family
NW96_RS04370	COG2921	Belongs to the UPF0250 family
NW96_RS04375	COG0583	DNA-binding transcription factor activity
NW96_RS04420	COG1250	3-hydroxyacyl-CoA dehydrogenase
NW96_RS04420	COG1024	Enoyl-CoA hydratase
NW96_RS04425	COG1960	acyl-CoA dehydrogenase activity
NW96_RS04430	COG1960	acyl-CoA dehydrogenase activity
NW96_RS04435	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NW96_RS04445	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NW96_RS04465	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
NW96_RS04505	COG2960	long-chain fatty acid transporting porin activity
NW96_RS04515	COG0004	ammonium transporteR
NW96_RS04600	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS04620	COG2824	Alkylphosphonate utilization operon protein PhnA
NW96_RS04655	COG2233	PERMEase
NW96_RS04665	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
NW96_RS04675	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
NW96_RS04685	COG1706	bacterial-type flagellum-dependent cell motility
NW96_RS04690	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
NW96_RS04705	COG1749	Flagellar hook protein flgE
NW96_RS04710	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
NW96_RS04715	COG1558	bacterial-type flagellum-dependent cell motility
NW96_RS04720	COG1815	bacterial-type flagellum-dependent cell motility
NW96_RS04735	COG2747	anti-sigma28 factor FlgM
NW96_RS04780	COG0741	lytic transglycosylase activity
NW96_RS04785	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NW96_RS04795	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
NW96_RS04800	COG1984	allophanate hydrolase subunit 2
NW96_RS04830	COG4608	Belongs to the ABC transporter superfamily
NW96_RS04835	COG0444	Belongs to the ABC transporter superfamily
NW96_RS04845	COG0601	transmembrane transport
NW96_RS04850	COG0747	negative chemotaxis
NW96_RS04870	COG0579	oxidoreductase
NW96_RS04890	COG3568	Endonuclease Exonuclease Phosphatase
NW96_RS04895	COG1280	lysine exporter protein (LysE YggA)
NW96_RS04915	COG0531	amino acid
NW96_RS04930	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NW96_RS05005	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
NW96_RS05015	COG2814	Major facilitator Superfamily
NW96_RS05035	COG0667	Aldo Keto reductase
NW96_RS05065	COG1560	Kdo2-lipid A biosynthetic process
NW96_RS05080	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
NW96_RS05090	COG0523	cobalamin synthesis protein
NW96_RS05120	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
NW96_RS05145	COG1309	transcriptional regulator
NW96_RS05160	COG2814	Major facilitator Superfamily
NW96_RS05170	COG2207	Transcriptional regulator
NW96_RS05185	COG1064	alcohol dehydrogenase
NW96_RS05205	COG0189	ligase activity
NW96_RS05215	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
NW96_RS05220	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NW96_RS05230	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
NW96_RS05235	COG0793	Belongs to the peptidase S41A family
NW96_RS05245	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NW96_RS05265	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
NW96_RS05280	COG1040	competence protein
NW96_RS05285	COG2226	methyltransferase
NW96_RS05300	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
NW96_RS05310	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
NW96_RS05340	COG1612	heme a metabolic process
NW96_RS05350	COG1999	signal sequence binding
NW96_RS05360	COG0840	transmembrane signaling receptor activity
NW96_RS05380	COG4303	Ethanolamine ammonia lyase large subunit
NW96_RS05385	COG4302	ethanolamine ammonia-lyase activity
NW96_RS05395	COG1012	belongs to the aldehyde dehydrogenase family
NW96_RS05425	COG1760	l-serine dehydratase
NW96_RS05445	COG0509	glycine decarboxylation via glycine cleavage system
NW96_RS05460	COG0673	inositol 2-dehydrogenase activity
NW96_RS05480	COG0210	DNA helicase
NW96_RS05485	COG3245	cytochrome
NW96_RS05495	COG0582	viral genome integration into host DNA
NW96_RS05530	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
NW96_RS05580	COG0514	ATP-dependent DNA helicase (RecQ)
NW96_RS05710	COG0201	protein transport
NW96_RS05755	COG4232	protein-disulfide reductase activity
NW96_RS05775	COG1333	cytochrome c biogenesis protein
NW96_RS05780	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
NW96_RS05805	COG3047	cAMP biosynthetic process
NW96_RS05825	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NW96_RS05840	COG1881	PFAM PEBP family protein
NW96_RS05845	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NW96_RS05855	COG0280	phosphate acetyltransferase
NW96_RS05855	COG0281	malic enzyme
NW96_RS05890	COG1522	sequence-specific DNA binding
NW96_RS05910	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NW96_RS05920	COG3396	Phenylacetate-CoA oxygenase
NW96_RS05925	COG3460	Phenylacetate-CoA oxygenase
NW96_RS05930	COG3396	Phenylacetate-CoA oxygenase
NW96_RS06015	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NW96_RS06020	COG4221	oxidoreductase activity
NW96_RS06025	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS06045	COG0747	negative chemotaxis
NW96_RS06050	COG0488	(ABC) transporter
NW96_RS06070	COG0288	reversible hydration of carbon dioxide
NW96_RS06075	COG0183	Belongs to the thiolase family
NW96_RS06085	COG3012	SEC-C Motif Domain Protein
NW96_RS06135	COG1785	Belongs to the alkaline phosphatase family
NW96_RS06155	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS06180	COG0840	transmembrane signaling receptor activity
NW96_RS06185	COG1609	Transcriptional regulator
NW96_RS06245	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
NW96_RS06260	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NW96_RS06265	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NW96_RS06285	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
NW96_RS06290	COG1704	LemA family
NW96_RS06350	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NW96_RS06360	COG0312	modulator of DNA gyrase
NW96_RS06365	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NW96_RS06370	COG3164	Protein of unknown function
NW96_RS06375	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
NW96_RS06380	COG0497	DNA recombination
NW96_RS06425	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NW96_RS06435	COG1428	Deoxynucleoside kinase
NW96_RS06440	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
NW96_RS06445	COG0617	tRNA 3'-terminal CCA addition
NW96_RS06455	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NW96_RS06485	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NW96_RS06490	COG0586	Pfam SNARE associated Golgi protein
NW96_RS06590	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NW96_RS06605	COG1368	sulfuric ester hydrolase activity
NW96_RS06610	COG3321	synthase
NW96_RS06610	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS06610	COG0604	alcohol dehydrogenase
NW96_RS06615	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
NW96_RS06620	COG0156	8-amino-7-oxononanoate synthase activity
NW96_RS06660	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NW96_RS06700	COG0656	L-ascorbic acid biosynthetic process
NW96_RS06705	COG2188	Transcriptional regulator
NW96_RS06725	COG2814	Major facilitator Superfamily
NW96_RS06780	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
NW96_RS06785	COG1570	exodeoxyribonuclease VII activity
NW96_RS06795	COG1663	tetraacyldisaccharide 4'-kinase activity
NW96_RS06825	COG1278	Cold shock
NW96_RS06835	COG0542	response to heat
NW96_RS06875	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NW96_RS06880	COG0196	riboflavin kinase activity
NW96_RS06885	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NW96_RS06890	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NW96_RS06890	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NW96_RS06895	COG1511	domain protein
NW96_RS06895	COG3264	Mechanosensitive ion channel
NW96_RS06920	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
NW96_RS06940	COG1047	Peptidyl-prolyl cis-trans
NW96_RS06945	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NW96_RS07000	COG1773	rubredoxin
NW96_RS07015	COG0488	(ABC) transporter
NW96_RS07045	COG0583	DNA-binding transcription factor activity
NW96_RS07055	COG0583	DNA-binding transcription factor activity
NW96_RS07065	COG0477	Major facilitator Superfamily
NW96_RS07120	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
NW96_RS07150	COG0859	PFAM glycosyl transferase family 9
NW96_RS07205	COG1129	ABC transporter
NW96_RS07215	COG0559	Belongs to the binding-protein-dependent transport system permease family
NW96_RS07230	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NW96_RS07240	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
NW96_RS07250	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NW96_RS07275	COG0220	tRNA (guanine-N7-)-methyltransferase activity
NW96_RS07285	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NW96_RS07290	COG2226	methyltransferase
NW96_RS07325	COG0762	integral membrane protein
NW96_RS07360	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
NW96_RS07380	COG0436	Aminotransferase
NW96_RS07410	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NW96_RS07410	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NW96_RS07435	COG2814	Major facilitator Superfamily
NW96_RS07450	COG1126	abc transporter atp-binding protein
NW96_RS07455	COG0765	amino acid transport
NW96_RS07460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW96_RS07475	COG0363	glucosamine-6-phosphate deaminase activity
NW96_RS07480	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NW96_RS07490	COG1175	transmembrane transport
NW96_RS07495	COG0395	ABC-type sugar transport system, permease component
NW96_RS07500	COG3842	ATPase activity
NW96_RS07505	COG2860	membrane
NW96_RS07510	COG1193	negative regulation of DNA recombination
NW96_RS07515	COG0492	ferredoxin-NADP+ reductase activity
NW96_RS07520	COG1674	ftsk spoiiie
NW96_RS07525	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
NW96_RS07535	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
NW96_RS07580	COG2894	cell division
NW96_RS07600	COG0859	PFAM glycosyl transferase family 9
NW96_RS07610	COG0477	Major facilitator Superfamily
NW96_RS07645	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NW96_RS07650	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NW96_RS07660	COG1561	YicC-like family, N-terminal region
NW96_RS07675	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NW96_RS07730	COG2885	chlorophyll binding
NW96_RS07735	COG0823	Involved in the tonB-independent uptake of proteins
NW96_RS07755	COG0824	Thioesterase
NW96_RS07760	COG4221	oxidoreductase activity
NW96_RS07820	COG0450	alkyl hydroperoxide reductase
NW96_RS07830	COG1960	acyl-CoA dehydrogenase activity
NW96_RS07865	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NW96_RS07875	COG2814	Major facilitator Superfamily
NW96_RS07900	COG2814	Major facilitator Superfamily
NW96_RS07905	COG0778	Nitroreductase
NW96_RS07910	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NW96_RS07915	COG0583	DNA-binding transcription factor activity
NW96_RS07930	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
NW96_RS07960	COG1529	Aldehyde oxidase and xanthine dehydrogenase
NW96_RS07985	COG4774	siderophore transport
NW96_RS07990	COG1120	ATPase activity
NW96_RS08000	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NW96_RS08045	COG0730	response to heat
NW96_RS08060	COG0584	glycerophosphoryl diester phosphodiesterase
NW96_RS08065	COG1280	lysine exporter protein (LysE YggA)
NW96_RS08125	COG0604	alcohol dehydrogenase
NW96_RS08130	COG1733	regulation of RNA biosynthetic process
NW96_RS08145	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NW96_RS08160	COG1773	rubredoxin
NW96_RS08180	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NW96_RS08255	COG1215	transferase activity, transferring glycosyl groups
NW96_RS08270	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NW96_RS08315	COG0456	acetyltransferase
NW96_RS08320	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NW96_RS08325	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
NW96_RS08325	COG0543	2 iron, 2 sulfur cluster binding
NW96_RS08340	COG1187	pseudouridine synthase activity
NW96_RS08350	COG0583	DNA-binding transcription factor activity
NW96_RS08360	COG2267	carboxylic ester hydrolase activity
NW96_RS08365	COG2258	MOSC domain
NW96_RS08370	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NW96_RS08380	COG1396	sequence-specific DNA binding
NW96_RS08395	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW96_RS08400	COG0697	spore germination
NW96_RS08410	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW96_RS08435	COG4106	trans-aconitate 2-methyltransferase activity
NW96_RS08450	COG2764	glyoxalase bleomycin resistance protein dioxygenase
NW96_RS08465	COG3135	benzoate transporter
NW96_RS08515	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NW96_RS08520	COG2878	Part of a membrane complex involved in electron transport
NW96_RS08525	COG1309	transcriptional regulator
NW96_RS08535	COG3387	PFAM Glycoside hydrolase 15-related
NW96_RS08545	COG2706	6-phosphogluconolactonase activity
NW96_RS08555	COG1674	ftsk spoiiie
NW96_RS08590	COG0513	Belongs to the DEAD box helicase family
NW96_RS08600	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NW96_RS08640	COG0438	transferase activity, transferring glycosyl groups
NW96_RS08645	COG0859	PFAM glycosyl transferase family 9
NW96_RS08685	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NW96_RS08695	COG1595	DNA-templated transcription, initiation
NW96_RS08750	COG2233	PERMEase
NW96_RS08775	COG0799	negative regulation of ribosome biogenesis
NW96_RS08790	COG0151	Belongs to the GarS family
NW96_RS08810	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS08840	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
NW96_RS08845	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
NW96_RS08865	COG0745	RESPONSE REGULATOR receiver
NW96_RS08900	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NW96_RS08910	COG0154	amidase activity
NW96_RS08945	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS08965	COG0438	transferase activity, transferring glycosyl groups
NW96_RS09000	COG0028	Belongs to the TPP enzyme family
NW96_RS09020	COG1183	phosphatidylcholine synthase activity
NW96_RS09030	COG0659	secondary active sulfate transmembrane transporter activity
NW96_RS09035	COG0288	reversible hydration of carbon dioxide
NW96_RS09050	COG0683	leucine binding
NW96_RS09070	COG4221	oxidoreductase activity
NW96_RS09070	COG3321	synthase
NW96_RS09070	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NW96_RS09070	COG0604	alcohol dehydrogenase
NW96_RS09075	COG0149	triose-phosphate isomerase activity
NW96_RS09110	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
NW96_RS09120	COG1034	ATP synthesis coupled electron transport
NW96_RS09155	COG1007	ATP synthesis coupled electron transport
NW96_RS09175	COG1960	acyl-CoA dehydrogenase activity
NW96_RS09180	COG1960	acyl-CoA dehydrogenase activity
NW96_RS09185	COG2030	dehydratase
NW96_RS09185	COG1012	belongs to the aldehyde dehydrogenase family
NW96_RS09205	COG1960	acyl-CoA dehydrogenase activity
NW96_RS09215	COG0588	phosphoglycerate mutase activity
NW96_RS09220	COG1024	Enoyl-CoA hydratase
NW96_RS09230	COG0436	Aminotransferase
NW96_RS09245	COG2866	Carboxypeptidase
NW96_RS09320	COG1959	2 iron, 2 sulfur cluster binding
NW96_RS09345	COG1522	sequence-specific DNA binding
NW96_RS09350	COG3842	ATPase activity
NW96_RS09355	COG1176	ABC-type spermidine putrescine transport system, permease component I
NW96_RS09360	COG1840	ABC-type Fe3 transport system, periplasmic component
NW96_RS09385	COG1289	transmembrane transporter activity
NW96_RS09395	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
NW96_RS09400	COG1074	ATP-dependent DNA helicase activity
NW96_RS09405	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
NW96_RS09465	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
NW96_RS09470	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
NW96_RS09485	COG0697	spore germination
NW96_RS09495	COG2814	Major facilitator Superfamily
NW96_RS09520	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
NW96_RS09530	COG3842	ATPase activity
NW96_RS09535	COG1177	transmembrane transport
NW96_RS09550	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
NW96_RS09555	COG1840	ABC-type Fe3 transport system, periplasmic component
NW96_RS09560	COG1609	Transcriptional regulator
NW96_RS09625	COG1522	sequence-specific DNA binding
NW96_RS09650	COG0583	DNA-binding transcription factor activity
NW96_RS09685	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW96_RS09730	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
NW96_RS09735	COG1250	3-hydroxyacyl-CoA dehydrogenase
NW96_RS09745	COG0583	DNA-binding transcription factor activity
NW96_RS09770	COG3052	prosthetic group binding
NW96_RS09790	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
NW96_RS09800	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NW96_RS09840	COG0477	Major facilitator Superfamily
NW96_RS09855	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
NW96_RS09860	COG0328	RNA-DNA hybrid ribonuclease activity
NW96_RS09865	COG2226	methyltransferase
NW96_RS09870	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
NW96_RS09875	COG1388	LysM domain
NW96_RS09875	COG0741	lytic transglycosylase activity
NW96_RS09905	COG0505	Belongs to the CarA family
NW96_RS09915	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
NW96_RS09920	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NW96_RS09930	COG1534	Rna-binding protein
NW96_RS09940	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NW96_RS09945	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NW96_RS09960	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
NW96_RS09965	COG0573	inorganic phosphate transmembrane transporter activity
NW96_RS09970	COG0581	inorganic phosphate transmembrane transporter activity
NW96_RS09985	COG0745	RESPONSE REGULATOR receiver
NW96_RS10000	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NW96_RS10080	COG0534	Mate efflux family protein
NW96_RS10090	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
NW96_RS10095	COG4942	peptidase
NW96_RS10135	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
NW96_RS10185	COG0366	Alpha amylase catalytic
NW96_RS10190	COG0366	Alpha amylase catalytic
NW96_RS10240	COG0583	DNA-binding transcription factor activity
NW96_RS10245	COG0745	RESPONSE REGULATOR receiver
NW96_RS10290	COG0457	Tetratricopeptide repeat
NW96_RS10290	COG0859	PFAM glycosyl transferase family 9
NW96_RS10390	COG1914	H( )-stimulated, divalent metal cation uptake system
NW96_RS10430	COG2814	Major facilitator Superfamily
NW96_RS10440	COG0583	DNA-binding transcription factor activity
NW96_RS10495	COG2197	response regulator
NW96_RS10510	COG2814	Major facilitator Superfamily
NW96_RS10520	COG1566	PFAM secretion protein HlyD family protein
NW96_RS10535	COG3511	phospholipase C
NW96_RS10540	COG1858	cytochrome C peroxidase
NW96_RS10570	COG1051	belongs to the nudix hydrolase family
NW96_RS10580	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NW96_RS10590	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NW96_RS10645	COG2816	NAD+ diphosphatase activity
NW96_RS10670	COG0824	Thioesterase
NW96_RS10680	COG0411	ABC transporter
NW96_RS10690	COG3718	enzyme involved in inositol metabolism
NW96_RS10700	COG3962	Belongs to the TPP enzyme family
NW96_RS10715	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW96_RS10730	COG0673	inositol 2-dehydrogenase activity
NW96_RS10735	COG0673	inositol 2-dehydrogenase activity
NW96_RS10745	COG0425	Belongs to the sulfur carrier protein TusA family
NW96_RS10755	COG0745	RESPONSE REGULATOR receiver
NW96_RS10765	COG5002	protein histidine kinase activity
NW96_RS10775	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NW96_RS10780	COG0525	valine-tRNA ligase activity
NW96_RS10785	COG0210	DNA helicase
NW96_RS10790	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NW96_RS10795	COG2223	nitrite transmembrane transporter activity
NW96_RS10800	COG0840	transmembrane signaling receptor activity
NW96_RS10835	COG0583	DNA-binding transcription factor activity
NW96_RS10850	COG0277	FAD linked oxidase domain protein
NW96_RS10865	COG1295	ribonuclease BN
NW96_RS10915	COG2801	Transposase and inactivated derivatives
NW96_RS10930	COG2192	nodulation
NW96_RS10945	COG2801	Transposase and inactivated derivatives
NW96_RS10985	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
NW96_RS10990	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NW96_RS10995	COG0508	dehydrogenase complex catalyzes the overall conversion of
NW96_RS11000	COG0567	Dehydrogenase, E1 component
NW96_RS11005	COG1217	gtp-binding protein TYPA
NW96_RS11015	COG1846	Transcriptional regulator
NW96_RS11025	COG1566	PFAM secretion protein HlyD family protein
NW96_RS11030	COG2814	Major facilitator Superfamily
NW96_RS11040	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NW96_RS11055	COG0195	Participates in both transcription termination and antitermination
NW96_RS11055	COG2251	uridine kinase activity
NW96_RS11065	COG1187	pseudouridine synthase activity
NW96_RS11070	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NW96_RS11075	COG0583	DNA-binding transcription factor activity
NW96_RS11140	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
NW96_RS11175	COG0776	regulation of translation
NW96_RS11180	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NW96_RS11180	COG0072	phenylalanine-tRNA ligase activity
NW96_RS11200	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NW96_RS11215	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NW96_RS11220	COG0251	oxidation-reduction process
NW96_RS11225	COG2267	carboxylic ester hydrolase activity
NW96_RS11235	COG0583	DNA-binding transcription factor activity
NW96_RS11250	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS11305	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS11340	COG3251	PFAM MbtH domain protein
NW96_RS11365	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS11375	COG2207	Transcriptional regulator
NW96_RS11385	COG0835	chemotaxis
NW96_RS11410	COG0318	PFAM AMP-dependent synthetase and ligase
NW96_RS11415	COG0477	Major facilitator Superfamily
NW96_RS11435	COG1732	Glycine betaine
NW96_RS11440	COG1174	glycine betaine transport
NW96_RS11445	COG1125	glycine betaine transport
NW96_RS11450	COG1174	glycine betaine transport
NW96_RS11470	COG2235	arginine
NW96_RS11475	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NW96_RS11500	COG0583	DNA-binding transcription factor activity
NW96_RS11510	COG0625	glutathione transferase activity
NW96_RS11525	COG1846	Transcriptional regulator
NW96_RS11535	COG1649	PFAM Uncharacterised BCR, COG1649
NW96_RS11565	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NW96_RS11585	COG3979	chitinase
NW96_RS11605	COG0400	carboxylic ester hydrolase activity
NW96_RS11665	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NW96_RS11670	COG4774	siderophore transport
NW96_RS11675	COG3486	L-lysine 6-monooxygenase (NADPH) activity
NW96_RS11730	COG1120	ATPase activity
NW96_RS11755	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS11760	COG1070	Carbohydrate kinase
NW96_RS11765	COG1063	alcohol dehydrogenase
NW96_RS11775	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW96_RS11780	COG1129	ABC transporter
NW96_RS11785	COG1879	ABC-type sugar transport system periplasmic component
NW96_RS11825	COG2375	cellular response to nickel ion
NW96_RS11825	COG1132	(ABC) transporter
NW96_RS11835	COG3121	Chaperone
NW96_RS11840	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NW96_RS11850	COG1309	transcriptional regulator
NW96_RS11860	COG0765	amino acid transport
NW96_RS11865	COG4597	amino acid ABC transporter
NW96_RS11880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW96_RS11925	COG4964	Belongs to the GSP D family
NW96_RS11950	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NW96_RS11955	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
NW96_RS11970	COG0477	Major facilitator Superfamily
NW96_RS11980	COG2719	SpoVR family
NW96_RS11985	COG2718	Belongs to the UPF0229 family
NW96_RS11990	COG2766	serine protein kinase
NW96_RS12005	COG0583	DNA-binding transcription factor activity
NW96_RS12010	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
NW96_RS12015	COG4208	sulfate ABC transporter
NW96_RS12020	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
NW96_RS12025	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
NW96_RS12075	COG0701	Predicted permease
NW96_RS12080	COG0667	Aldo Keto reductase
NW96_RS12110	COG1301	dicarboxylic acid transport
NW96_RS12170	COG1116	anion transmembrane transporter activity
NW96_RS12175	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NW96_RS12240	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW96_RS12245	COG0765	amino acid transport
NW96_RS12255	COG0673	inositol 2-dehydrogenase activity
NW96_RS12260	COG1802	Transcriptional regulator
NW96_RS12270	COG3023	N-Acetylmuramoyl-L-alanine amidase
NW96_RS12280	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NW96_RS12285	COG0557	exoribonuclease II activity
NW96_RS12305	COG0840	transmembrane signaling receptor activity
NW96_RS12335	COG0519	Catalyzes the synthesis of GMP from XMP
NW96_RS12345	COG2814	Major facilitator Superfamily
NW96_RS12355	COG0318	PFAM AMP-dependent synthetase and ligase
NW96_RS12425	COG4964	Belongs to the GSP D family
NW96_RS12465	COG1177	transmembrane transport
NW96_RS12470	COG1176	ABC-type spermidine putrescine transport system, permease component I
NW96_RS12475	COG3842	ATPase activity
NW96_RS12485	COG1914	H( )-stimulated, divalent metal cation uptake system
NW96_RS12500	COG3047	cAMP biosynthetic process
NW96_RS12505	COG2070	2-Nitropropane dioxygenase
NW96_RS12525	COG0488	(ABC) transporter
NW96_RS12535	COG2982	Protein involved in outer membrane biogenesis
NW96_RS12540	COG1122	ATPase activity
NW96_RS12545	COG0390	transport system, permease component
NW96_RS12565	COG0560	Phosphoserine phosphatase
NW96_RS12570	COG0626	cystathionine gamma-synthase activity
NW96_RS12580	COG0183	Belongs to the thiolase family
NW96_RS12605	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS12610	COG0183	Belongs to the thiolase family
NW96_RS12615	COG3243	poly(R)-hydroxyalkanoic acid synthase
NW96_RS12625	COG0564	pseudouridine synthase activity
NW96_RS12635	COG1199	ATP-dependent helicase activity
NW96_RS12650	COG2183	response to ionizing radiation
NW96_RS12670	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
NW96_RS12690	COG0330	HflC and HflK could
NW96_RS12695	COG0330	HflC and HflK could
NW96_RS12700	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NW96_RS12715	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
NW96_RS12750	COG0670	Belongs to the BI1 family
NW96_RS12795	COG1804	L-carnitine dehydratase bile acid-inducible protein F
NW96_RS12810	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NW96_RS12830	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NW96_RS12835	COG0789	Transcriptional regulator
NW96_RS12840	COG0477	Major facilitator Superfamily
NW96_RS12845	COG3228	Belongs to the MtfA family
NW96_RS12865	COG0534	Mate efflux family protein
NW96_RS12895	COG0542	response to heat
NW96_RS12900	COG1959	2 iron, 2 sulfur cluster binding
NW96_RS12905	COG2346	COG2346, Truncated hemoglobins
NW96_RS12910	COG0314	molybdopterin synthase activity
NW96_RS12915	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
NW96_RS12950	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NW96_RS12955	COG2076	Multidrug Resistance protein
NW96_RS12960	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
NW96_RS12965	COG0463	Glycosyl transferase, family 2
NW96_RS12975	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NW96_RS12975	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NW96_RS12980	COG0726	polysaccharide deacetylase
NW96_RS12985	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
NW96_RS12995	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
NW96_RS13000	COG0791	NLP P60 protein
NW96_RS13010	COG0306	phosphate transporter
NW96_RS13055	COG1595	DNA-templated transcription, initiation
NW96_RS13085	COG0252	asparaginase activity
NW96_RS13115	COG0438	transferase activity, transferring glycosyl groups
NW96_RS13145	COG0084	hydrolase, TatD family'
NW96_RS13150	COG1247	-acetyltransferase
NW96_RS13165	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NW96_RS13170	COG0354	folic acid binding
NW96_RS13185	COG0657	acetylesterase activity
NW96_RS13190	COG2130	NADP-dependent
NW96_RS13225	COG0183	Belongs to the thiolase family
NW96_RS13230	COG1335	isochorismatase
NW96_RS13235	COG1024	Enoyl-CoA hydratase
NW96_RS13235	COG1250	3-hydroxyacyl-CoA dehydrogenase
NW96_RS13245	COG0318	PFAM AMP-dependent synthetase and ligase
NW96_RS13270	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NW96_RS13280	COG0047	phosphoribosylformylglycinamidine synthase activity
NW96_RS13280	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NW96_RS13290	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NW96_RS13310	COG4181	ATPase activity
NW96_RS13385	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
NW96_RS13415	COG1929	Belongs to the glycerate kinase type-1 family
NW96_RS13420	COG1846	Transcriptional regulator
NW96_RS13430	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NW96_RS13525	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NW96_RS13540	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NW96_RS13625	COG4266	Belongs to the allantoicase family
NW96_RS13630	COG3648	Uricase
NW96_RS13630	COG3195	allantoin biosynthetic process
NW96_RS13645	COG1953	Uracil, thiamine, allantoin
NW96_RS13665	COG1619	proteins homologs of microcin C7 resistance protein MccF
NW96_RS13760	COG0697	spore germination
NW96_RS13770	COG2867	negative regulation of translational initiation
NW96_RS13780	COG0330	HflC and HflK could
NW96_RS13830	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NW96_RS13870	COG0750	zinc metalloprotease
NW96_RS13885	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NW96_RS13915	COG0024	Methionine aminopeptidase
NW96_RS13925	COG1187	pseudouridine synthase activity
NW96_RS13930	COG0242	peptide deformylase activity
NW96_RS13975	COG1393	Belongs to the ArsC family
NW96_RS13985	COG2890	protein-(glutamine-N5) methyltransferase activity
NW96_RS14000	COG0386	Belongs to the glutathione peroxidase family
NW96_RS14005	COG0488	(ABC) transporter
NW96_RS14025	COG0477	Major facilitator Superfamily
NW96_RS14030	COG0351	phosphomethylpyrimidine kinase
NW96_RS14045	COG1573	uracil-dna glycosylase
NW96_RS14055	COG1214	PFAM Peptidase M22, glycoprotease
NW96_RS14065	COG0513	Belongs to the DEAD box helicase family
NW96_RS14075	COG2224	Isocitrate lyase
NW96_RS14085	COG0583	DNA-binding transcription factor activity
NW96_RS14095	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
NW96_RS14150	COG1752	Esterase of the alpha-beta hydrolase superfamily
NW96_RS14155	COG0791	NLP P60 protein
NW96_RS14165	COG4172	Belongs to the ABC transporter superfamily
NW96_RS14170	COG4239	(ABC) transporter, permease
NW96_RS14175	COG4174	ABC transporter (Permease)
NW96_RS14180	COG4166	transmembrane transport
NW96_RS14205	COG0243	molybdopterin cofactor binding
NW96_RS14235	COG0024	Methionine aminopeptidase
NW96_RS14255	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
NW96_RS14275	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NW96_RS14290	COG3958	Transketolase
NW96_RS14295	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
NW96_RS14315	COG2175	clavaminate synthase activity
NW96_RS14345	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NW96_RS14350	COG0529	Catalyzes the synthesis of activated sulfate
NW96_RS14350	COG2895	sulfate adenylyltransferase (ATP) activity
NW96_RS14370	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NW96_RS14375	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NW96_RS14415	COG0527	aspartate kinase activity
NW96_RS14425	COG0037	tRNA processing
NW96_RS14450	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NW96_RS14460	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
NW96_RS14470	COG1045	serine acetyltransferase
NW96_RS14485	COG0483	inositol monophosphate 1-phosphatase activity
NW96_RS14525	COG2850	peptidyl-arginine hydroxylation
NW96_RS14540	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
NW96_RS14545	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
NW96_RS14550	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NW96_RS14560	COG0180	Tryptophanyl-tRNA synthetase
NW96_RS14565	COG1994	Peptidase M50
NW96_RS14570	COG0009	L-threonylcarbamoyladenylate synthase
NW96_RS14575	COG0613	PHP domain protein
NW96_RS14585	COG0596	Alpha beta hydrolase
NW96_RS14595	COG2833	Protein of unknown function (DUF455)
NW96_RS14605	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NW96_RS14615	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NW96_RS14645	COG2333	competence protein COMEC
NW96_RS14645	COG0658	competence protein
NW96_RS14650	COG0084	hydrolase, TatD family'
NW96_RS14655	COG1136	(ABC) transporter
NW96_RS14675	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
NW96_RS14700	COG2975	iron-sulfur cluster assembly
NW96_RS14720	COG0316	Belongs to the HesB IscA family
NW96_RS14725	COG0822	iron-sulfur transferase activity
NW96_RS14730	COG1104	cysteine desulfurase activity
NW96_RS14740	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NW96_RS14765	COG1414	Transcriptional regulator
NW96_RS14795	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NW96_RS14805	COG0508	dehydrogenase complex catalyzes the overall conversion of
NW96_RS14810	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
NW96_RS14820	COG4566	intracellular signal transduction
NW96_RS14840	COG0339	signal peptide processing
NW96_RS14845	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NW96_RS14865	COG2223	nitrite transmembrane transporter activity
NW96_RS14870	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
NW96_RS14875	COG1140	nitrate reductase beta subunit
NW96_RS14880	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
NW96_RS14885	COG2181	nitrate reductase activity
NW96_RS14890	COG4585	Histidine kinase
NW96_RS14895	COG2197	response regulator
NW96_RS14920	COG0174	glutamine synthetase
NW96_RS14935	COG1058	Belongs to the CinA family
NW96_RS14935	COG1546	Belongs to the CinA family
NW96_RS14960	COG1643	Atp-dependent helicase
NW96_RS14965	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
NW96_RS14965	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
NW96_RS14975	COG0477	Major facilitator Superfamily
NW96_RS14990	COG1960	acyl-CoA dehydrogenase activity
NW96_RS14995	COG0583	DNA-binding transcription factor activity
NW96_RS15075	COG1881	PFAM PEBP family protein
NW96_RS15080	COG2814	Major facilitator Superfamily
NW96_RS15100	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
NW96_RS15130	COG1116	anion transmembrane transporter activity
NW96_RS15135	COG1176	ABC-type spermidine putrescine transport system, permease component I
NW96_RS15185	COG4215	(ABC) transporter
NW96_RS15205	COG0347	Belongs to the P(II) protein family
NW96_RS15235	COG2827	Endonuclease containing a URI domain
NW96_RS15240	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NW96_RS15255	COG2271	Major facilitator Superfamily
NW96_RS15295	COG2226	methyltransferase
NW96_RS15335	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NW96_RS15360	COG0489	protein tyrosine kinase activity
NW96_RS15370	COG3047	cAMP biosynthetic process
NW96_RS15370	COG2885	chlorophyll binding
NW96_RS15400	COG2911	Protein conserved in bacteria
NW96_RS15405	COG0729	surface antigen
NW96_RS15415	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NW96_RS15435	COG0489	protein tyrosine kinase activity
NW96_RS15440	COG2259	Doxx family
NW96_RS15445	COG1492	cobalamin metabolic process
NW96_RS15465	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
NW96_RS15485	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
NW96_RS15490	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
NW96_RS15495	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
NW96_RS15505	COG4206	TonB-dependent receptor
NW96_RS15560	COG4654	Cytochrome c, class I
NW96_RS15580	COG0795	lipopolysaccharide-transporting ATPase activity
NW96_RS15595	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
NW96_RS15595	COG1648	precorrin-2 dehydrogenase activity
NW96_RS15600	COG2895	sulfate adenylyltransferase (ATP) activity
NW96_RS15610	COG0175	sulfate reduction
NW96_RS15625	COG0583	DNA-binding transcription factor activity
NW96_RS15655	COG0174	glutamine synthetase
NW96_RS15660	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
NW96_RS15695	COG0402	S-adenosylhomocysteine deaminase activity
NW96_RS15710	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
NW96_RS15760	COG0529	Catalyzes the synthesis of activated sulfate
NW96_RS15765	COG0415	Belongs to the DNA photolyase family
NW96_RS15785	COG2151	metal-sulfur cluster biosynthetic enzyme
NW96_RS15825	COG3154	lipid carrier protein
NW96_RS15830	COG0826	peptidase U32
NW96_RS15835	COG0826	peptidase U32
NW96_RS15855	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NW96_RS15860	COG0635	Involved in the biosynthesis of porphyrin-containing compound
NW96_RS15865	COG0840	transmembrane signaling receptor activity
NW96_RS15890	COG0396	ATPase activity
NW96_RS15900	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NW96_RS15905	COG0822	iron-sulfur transferase activity
NW96_RS15910	COG2151	metal-sulfur cluster biosynthetic enzyme
NW96_RS15925	COG1959	2 iron, 2 sulfur cluster binding
NW96_RS15955	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NW96_RS15965	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW96_RS15975	COG2988	succinylglutamate desuccinylase activity
NW96_RS16000	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
NW96_RS16040	COG3511	phospholipase C
NW96_RS16050	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
NW96_RS16060	COG0596	Alpha beta hydrolase
NW96_RS16070	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NW96_RS16085	COG3394	polysaccharide catabolic process
NW96_RS16115	COG0683	leucine binding
NW96_RS16120	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NW96_RS16135	COG0438	transferase activity, transferring glycosyl groups
NW96_RS16140	COG1132	(ABC) transporter
NW96_RS16145	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
NW96_RS16160	COG1999	signal sequence binding
NW96_RS16175	COG2153	protein acetylation
NW96_RS16190	COG0583	DNA-binding transcription factor activity
NW96_RS16195	COG1956	GAF domain-containing protein
NW96_RS16215	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NW96_RS16235	COG2204	response regulator
NW96_RS16250	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
NW96_RS16255	COG1381	Involved in DNA repair and RecF pathway recombination
NW96_RS16260	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NW96_RS16265	COG0571	ribonuclease III activity
NW96_RS16270	COG0681	Belongs to the peptidase S26 family
NW96_RS16285	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NW96_RS16290	COG3026	antisigma factor binding
NW96_RS16310	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NW96_RS16345	COG1399	metal-binding, possibly nucleic acid-binding protein
NW96_RS16385	COG1530	ribonuclease E activity
NW96_RS16390	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NW96_RS16400	COG0303	'Molybdopterin
NW96_RS16415	COG1322	Protein conserved in bacteria
NW96_RS16435	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NW96_RS16445	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
NW96_RS16460	COG3045	CreA protein
NW96_RS16480	COG2501	S4 domain
NW96_RS16485	COG0534	Mate efflux family protein
NW96_RS16505	COG0114	fumarate hydratase activity
NW96_RS16525	COG0640	Transcriptional regulator
NW96_RS16615	COG4772	TonB-dependent receptor
NW96_RS16685	COG0583	DNA-binding transcription factor activity
NW96_RS16695	COG0308	aminopeptidase N
NW96_RS16710	COG2119	membrane
NW96_RS16720	COG0402	S-adenosylhomocysteine deaminase activity
NW96_RS16725	COG2252	PERMEase
NW96_RS16730	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NW96_RS16750	COG0154	amidase activity
NW96_RS16760	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
NW96_RS16805	COG3383	formate dehydrogenase (NAD+) activity
NW96_RS16820	COG1910	domain protein
NW96_RS16830	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NW96_RS16855	COG0546	phosphoglycolate phosphatase activity
NW96_RS16885	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NW96_RS16890	COG0077	Prephenate dehydratase
NW96_RS16890	COG1605	Chorismate mutase
NW96_RS16895	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NW96_RS16925	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
NW96_RS16935	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
NW96_RS16960	COG2951	lytic endotransglycosylase activity
NW96_RS16965	COG0123	including yeast histone deacetylase and acetoin utilization protein
NW96_RS16975	COG2267	carboxylic ester hydrolase activity
NW96_RS16985	COG2011	ABC-type metal ion transport system permease component
NW96_RS17085	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
NW96_RS17100	COG0501	Belongs to the peptidase M48B family
NW96_RS17110	COG0521	Mo-molybdopterin cofactor biosynthetic process
NW96_RS17115	COG3028	Belongs to the UPF0307 family
NW96_RS17125	COG0312	modulator of DNA gyrase
NW96_RS17135	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NW96_RS17140	COG2204	response regulator
NW96_RS17165	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NW96_RS17190	COG0728	peptidoglycan biosynthetic process
NW96_RS17210	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NW96_RS17215	COG0812	UDP-N-acetylmuramate dehydrogenase activity
NW96_RS17225	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
NW96_RS17230	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NW96_RS17235	COG0318	PFAM AMP-dependent synthetase and ligase
NW96_RS17240	COG4974	Belongs to the 'phage' integrase family
NW96_RS17250	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
NW96_RS17255	COG0802	atpase or kinase
NW96_RS17260	COG0860	N-Acetylmuramoyl-L-alanine amidase
NW96_RS17275	COG1741	Belongs to the pirin family
NW96_RS17290	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
NW96_RS17300	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
NW96_RS17315	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NW96_RS17325	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NW96_RS17330	COG1522	sequence-specific DNA binding
NW96_RS17350	COG2271	Major facilitator Superfamily
NW96_RS17360	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NW96_RS17365	COG1012	belongs to the aldehyde dehydrogenase family
NW96_RS17375	COG0583	DNA-binding transcription factor activity
NW96_RS17380	COG0246	Mannitol dehydrogenase
NW96_RS17385	COG1070	Carbohydrate kinase
NW96_RS17390	COG2390	Transcriptional regulator
NW96_RS17405	COG0583	DNA-binding transcription factor activity
NW96_RS17420	COG3842	ATPase activity
NW96_RS17425	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NW96_RS17435	COG1175	transmembrane transport
NW96_RS17450	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NW96_RS17460	COG0735	belongs to the Fur family
NW96_RS17470	COG1121	(ABC) transporter
NW96_RS17475	COG1108	ABC-type Mn2 Zn2 transport systems permease components
NW96_RS17480	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
NW96_RS17500	COG2233	PERMEase
NW96_RS17530	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NW96_RS17535	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NW96_RS17565	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
NW96_RS17610	COG0009	L-threonylcarbamoyladenylate synthase
NW96_RS17615	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NW96_RS17620	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NW96_RS17625	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
NW96_RS17635	COG0469	pyruvate kinase activity
NW96_RS17645	COG0126	phosphoglycerate kinase activity
NW96_RS17670	COG0859	PFAM glycosyl transferase family 9
NW96_RS17680	COG0429	hydrolase of the alpha beta-hydrolase fold
NW96_RS17690	COG4783	chaperone-mediated protein folding
NW96_RS17730	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NW96_RS17735	COG2137	regulation of response to DNA damage stimulus
NW96_RS17750	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NW96_RS17755	COG0861	Integral membrane protein TerC family
NW96_RS17760	COG4969	Belongs to the N-Me-Phe pilin family
NW96_RS17765	COG3307	-O-antigen
NW96_RS17805	COG0840	transmembrane signaling receptor activity
NW96_RS17850	COG4948	Mandelate Racemase Muconate Lactonizing
NW96_RS17880	COG0513	Belongs to the DEAD box helicase family
NW96_RS17925	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NW96_RS17930	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
NW96_RS17945	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NW96_RS17950	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
NW96_RS17955	COG0367	asparagine synthase
NW96_RS17970	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
NW96_RS17980	COG1396	sequence-specific DNA binding
NW96_RS17985	COG2814	Major facilitator Superfamily
NW96_RS17990	COG0583	DNA-binding transcription factor activity
NW96_RS18005	COG1702	phosphate starvation-inducible protein PhoH
NW96_RS18025	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
NW96_RS18035	COG0815	Transfers the fatty acyl group on membrane lipoproteins
NW96_RS18040	COG0752	glycyl-tRNA synthetase alpha subunit
NW96_RS18045	COG0751	glycine-tRNA ligase activity
NW96_RS18050	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NW96_RS18055	COG0204	Acyl-transferase
NW96_RS18085	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
NW96_RS18090	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
NW96_RS18105	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
NW96_RS18115	COG5265	(ABC) transporter
NW96_RS18135	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
NW96_RS18140	COG1024	Enoyl-CoA hydratase
NW96_RS18145	COG0183	Belongs to the thiolase family
NW96_RS18150	COG1024	Enoyl-CoA hydratase
NW96_RS18150	COG1250	3-hydroxyacyl-CoA dehydrogenase
NW96_RS18155	COG1960	acyl-CoA dehydrogenase activity
NW96_RS18170	COG0494	nUDIX hydrolase
NW96_RS18240	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
NW96_RS18250	COG0251	oxidation-reduction process
NW96_RS18260	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
NW96_RS18285	COG0477	Major facilitator Superfamily
NW96_RS18315	COG0708	Exodeoxyribonuclease III
NW96_RS18320	COG2326	polyphosphate kinase activity
NW96_RS18340	COG1077	Cell shape determining protein MreB Mrl
NW96_RS18355	COG0768	penicillin binding
NW96_RS18360	COG0772	Belongs to the SEDS family
NW96_RS18385	COG0720	synthase
NW96_RS18390	COG0602	queuosine metabolic process
NW96_RS18410	COG2204	response regulator
NW96_RS18415	COG5000	phosphorelay sensor kinase activity
NW96_RS18425	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NW96_RS18425	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NW96_RS18445	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NW96_RS18450	COG0242	peptide deformylase activity
NW96_RS18455	COG0758	DNA mediated transformation
NW96_RS18470	COG0583	DNA-binding transcription factor activity
NW96_RS18475	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NW96_RS18530	COG4695	Portal protein
NW96_RS18540	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NW96_RS18580	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NW96_RS18595	COG2169	Transcriptional regulator
NW96_RS18595	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NW96_RS18640	COG4695	Portal protein
NW96_RS18650	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NW96_RS18665	COG0583	DNA-binding transcription factor activity
NW96_RS18695	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NW96_RS18710	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NW96_RS18710	COG2169	Transcriptional regulator
NW96_RS18755	COG4695	Portal protein
NW96_RS18765	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NW96_RS18780	COG0583	DNA-binding transcription factor activity
NW96_RS18810	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NW96_RS18825	COG2169	Transcriptional regulator
NW96_RS18825	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NW96_RS18925	COG1396	sequence-specific DNA binding
NW96_RS18950	COG1309	transcriptional regulator
NW96_RS18975	COG0473	3-isopropylmalate dehydrogenase activity
NW96_RS18980	COG0583	DNA-binding transcription factor activity
NW96_RS19000	COG0625	glutathione transferase activity
NW96_RS19025	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS19035	COG0671	phosphoesterase, PA-phosphatase related
NW96_RS19095	COG1032	radical SAM domain protein
NW96_RS19110	COG0583	DNA-binding transcription factor activity
NW96_RS19115	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NW96_RS19120	COG0589	response to stress
NW96_RS19180	COG1045	serine acetyltransferase
NW96_RS19190	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS19195	COG0302	gtp cyclohydrolase
NW96_RS19215	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
NW96_RS19220	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NW96_RS19225	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NW96_RS19230	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
NW96_RS19305	COG1595	DNA-templated transcription, initiation
NW96_RS19310	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NW96_RS19345	COG2916	Histone family protein nucleoid-structuring protein H-NS
NW96_RS19360	COG0477	Major facilitator Superfamily
NW96_RS19530	COG0596	Alpha beta hydrolase
NW96_RS19570	COG0625	glutathione transferase activity
NW96_RS19590	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
NW96_RS19595	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NW96_RS19625	COG0295	cytidine deaminase activity
NW96_RS19635	COG2823	Periplasmic or secreted lipoprotein
NW96_RS19660	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NW96_RS19665	COG0280	phosphate acetyltransferase
NW96_RS19670	COG3243	poly(R)-hydroxyalkanoic acid synthase
NW96_RS19685	COG0355	proton-transporting ATP synthase activity, rotational mechanism
NW96_RS19700	COG0356	it plays a direct role in the translocation of protons across the membrane
NW96_RS19710	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NW96_RS19710	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NW96_RS19745	COG0840	transmembrane signaling receptor activity
NW96_RS19755	COG0784	Response regulator, receiver
NW96_RS19755	COG4191	Histidine kinase
NW96_RS19760	COG0842	Transport permease protein
NW96_RS19765	COG1129	ABC transporter
NW96_RS19765	COG0842	Transport permease protein
NW96_RS19790	COG0589	response to stress
NW96_RS19805	COG1136	(ABC) transporter
NW96_RS19830	COG0840	transmembrane signaling receptor activity
NW96_RS19870	COG1611	Belongs to the LOG family
NW96_RS19905	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NW96_RS19915	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS19925	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
NW96_RS19970	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS20000	COG3537	Alpha-1,2-mannosidase
NW96_RS20035	COG0367	asparagine synthase
NW96_RS20085	COG2885	chlorophyll binding
NW96_RS20205	COG0583	DNA-binding transcription factor activity
NW96_RS20260	COG1984	allophanate hydrolase subunit 2
NW96_RS20275	COG0511	ligase activity, forming carbon-carbon bonds
NW96_RS20280	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
NW96_RS20345	COG0840	transmembrane signaling receptor activity
NW96_RS20405	COG0535	radical SAM domain protein
NW96_RS20415	COG0840	transmembrane signaling receptor activity
NW96_RS20440	COG1285	pathogenesis
NW96_RS20525	COG0346	lactoylglutathione lyase activity
NW96_RS20535	COG1562	ergosterol biosynthetic process
NW96_RS20560	COG1294	oxidase, subunit
NW96_RS20565	COG1271	oxidase subunit
NW96_RS20575	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
NW96_RS20590	COG2860	membrane
NW96_RS20595	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
NW96_RS20605	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NW96_RS20615	COG4558	Periplasmic binding protein
NW96_RS20620	COG3720	iron ion transport
NW96_RS20650	COG3842	ATPase activity
NW96_RS20655	COG1840	ABC-type Fe3 transport system, periplasmic component
NW96_RS20670	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS20680	COG0698	ribose 5-phosphate isomerase
NW96_RS20685	COG1129	ABC transporter
NW96_RS20690	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW96_RS20695	COG1879	ABC-type sugar transport system periplasmic component
NW96_RS20700	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS20705	COG1063	alcohol dehydrogenase
NW96_RS20710	COG2376	Dihydroxyacetone kinase
NW96_RS20765	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
NW96_RS20800	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NW96_RS20820	COG3634	alkyl hydroperoxide reductase activity
NW96_RS20840	COG0778	Nitroreductase
NW96_RS20850	COG2308	Evidence 4 Homologs of previously reported genes of
NW96_RS20880	COG1305	Transglutaminase-like
NW96_RS20885	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW96_RS20905	COG4977	sequence-specific DNA binding
NW96_RS20915	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
NW96_RS20965	COG0531	amino acid
NW96_RS20970	COG3384	dioxygenase
NW96_RS20980	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
NW96_RS20985	COG2890	protein-(glutamine-N5) methyltransferase activity
NW96_RS21015	COG0006	proline dipeptidase activity
NW96_RS21020	COG1335	isochorismatase
NW96_RS21030	COG0488	(ABC) transporter
NW96_RS21045	COG0584	glycerophosphoryl diester phosphodiesterase
NW96_RS21080	COG0012	GTP binding
NW96_RS21110	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NW96_RS21115	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
NW96_RS21130	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NW96_RS21150	COG0512	Glutamine amidotransferase of anthranilate synthase
NW96_RS21165	COG0546	phosphoglycolate phosphatase activity
NW96_RS21170	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
NW96_RS21180	COG2967	ApaG domain
NW96_RS21190	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
NW96_RS21205	COG1024	Enoyl-CoA hydratase
NW96_RS21210	COG0183	Belongs to the thiolase family
NW96_RS21220	COG1024	Enoyl-CoA hydratase
NW96_RS21320	COG0798	PFAM Bile acid sodium symporter
NW96_RS21335	COG0640	Transcriptional regulator
NW96_RS21375	COG4175	Glycine betaine
NW96_RS21425	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NW96_RS21430	COG3622	Belongs to the hyi family
NW96_RS21435	COG2271	Major facilitator Superfamily
NW96_RS21440	COG0235	Class ii aldolase
NW96_RS21445	COG3395	kinase activity
NW96_RS21450	COG2084	Dehydrogenase
NW96_RS21455	COG2186	Transcriptional regulator
NW96_RS21515	COG5295	Hep Hag repeat protein
NW96_RS21515	COG5295	Hep Hag repeat protein
NW96_RS21525	COG2916	Histone family protein nucleoid-structuring protein H-NS
NW96_RS21580	COG1272	protein, Hemolysin III
NW96_RS21600	COG1522	sequence-specific DNA binding
NW96_RS21615	COG1448	Aminotransferase
NW96_RS21670	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW96_RS21670	COG4191	Histidine kinase
NW96_RS21675	COG2201	protein-glutamate methylesterase activity
NW96_RS21690	COG2373	Large extracellular alpha-helical protein
NW96_RS21725	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
NW96_RS21740	COG2175	clavaminate synthase activity
NW96_RS21745	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
NW96_RS21765	COG3291	Pkd domain containing protein
NW96_RS21780	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
NW96_RS21845	COG0589	response to stress
NW96_RS21880	COG4221	oxidoreductase activity
NW96_RS21900	COG1113	amino acid transport
NW96_RS21915	COG2916	Histone family protein nucleoid-structuring protein H-NS
NW96_RS21970	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
NW96_RS21975	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
NW96_RS21980	COG2271	Major facilitator Superfamily
NW96_RS22005	COG1176	ABC-type spermidine putrescine transport system, permease component I
NW96_RS22020	COG1012	belongs to the aldehyde dehydrogenase family
NW96_RS22095	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
NW96_RS22100	COG0667	Aldo Keto reductase
NW96_RS22105	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS22120	COG0556	nucleotide-excision repair
NW96_RS22130	COG4633	Protein conserved in bacteria
NW96_RS22135	COG0672	)-iron permease
NW96_RS22145	COG3193	protein, possibly involved in utilization of glycolate and propanediol
NW96_RS22195	COG0583	DNA-binding transcription factor activity
NW96_RS22240	COG1012	belongs to the aldehyde dehydrogenase family
NW96_RS22245	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NW96_RS22250	COG0531	amino acid
NW96_RS22265	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS22285	COG1902	pentaerythritol trinitrate reductase activity
NW96_RS22300	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS22305	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
NW96_RS22320	COG0516	GMP reductase activity
NW96_RS22320	COG0517	IMP dehydrogenase activity
NW96_RS22325	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NW96_RS22350	COG2197	response regulator
NW96_RS22355	COG1285	pathogenesis
NW96_RS22365	COG1408	metallophosphoesterase
NW96_RS22380	COG1414	Transcriptional regulator
NW96_RS22385	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS22395	COG2146	nitrite reductase [NAD(P)H] activity
NW96_RS22425	COG1414	Transcriptional regulator
NW96_RS22430	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS22435	COG0028	Belongs to the TPP enzyme family
NW96_RS22445	COG1012	belongs to the aldehyde dehydrogenase family
NW96_RS22460	COG0477	Major facilitator Superfamily
NW96_RS22490	COG0154	amidase activity
NW96_RS22500	COG1522	sequence-specific DNA binding
NW96_RS22550	COG0492	ferredoxin-NADP+ reductase activity
NW96_RS22575	COG0596	Alpha beta hydrolase
NW96_RS22605	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NW96_RS22630	COG0840	transmembrane signaling receptor activity
NW96_RS22635	COG0840	transmembrane signaling receptor activity
NW96_RS22665	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NW96_RS22670	COG0596	Alpha beta hydrolase
NW96_RS22715	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS22755	COG0583	DNA-binding transcription factor activity
NW96_RS22780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NW96_RS22785	COG0601	transmembrane transport
NW96_RS22795	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
NW96_RS22830	COG3209	COG3209 Rhs family protein
NW96_RS22875	COG2140	Oxalate decarboxylase
NW96_RS22880	COG1914	H( )-stimulated, divalent metal cation uptake system
NW96_RS22890	COG4682	membrane
NW96_RS22895	COG3781	membrane
NW96_RS22900	COG0243	molybdopterin cofactor binding
NW96_RS22905	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW96_RS22930	COG1404	Belongs to the peptidase S8 family
NW96_RS22955	COG2259	Doxx family
NW96_RS22980	COG4160	amino acid transport
NW96_RS22985	COG4598	ABC transporter
NW96_RS22990	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NW96_RS23055	COG3275	phosphorelay sensor kinase activity
NW96_RS23065	COG3279	Response regulator of the LytR AlgR family
NW96_RS23090	COG0500	methyltransferase
NW96_RS23095	COG2207	Transcriptional regulator
NW96_RS23115	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
NW96_RS23120	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NW96_RS23125	COG1024	Enoyl-CoA hydratase
NW96_RS23130	COG1024	Enoyl-CoA hydratase
NW96_RS23150	COG3425	synthase
NW96_RS23175	COG2070	2-Nitropropane dioxygenase
NW96_RS23175	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
NW96_RS23180	COG0569	domain protein
NW96_RS23180	COG0475	glutathione-regulated potassium exporter activity
NW96_RS23205	COG4221	oxidoreductase activity
NW96_RS23205	COG3321	synthase
NW96_RS23205	COG0300	oxidoreductase activity
NW96_RS23205	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NW96_RS23240	COG0583	DNA-binding transcription factor activity
NW96_RS23250	COG0387	Pfam Sodium calcium exchanger
NW96_RS23275	COG0179	Fumarylacetoacetate (FAA) hydrolase
NW96_RS23305	COG2353	YceI-like domain
NW96_RS23325	COG1595	DNA-templated transcription, initiation
NW96_RS23335	COG4774	siderophore transport
NW96_RS23340	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW96_RS23345	COG1172	Belongs to the binding-protein-dependent transport system permease family
NW96_RS23350	COG1129	ABC transporter
NW96_RS23385	COG1960	acyl-CoA dehydrogenase activity
NW96_RS23395	COG2271	Major facilitator Superfamily
NW96_RS23525	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NW96_RS23530	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
NW96_RS23545	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
NW96_RS23560	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
NW96_RS23590	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS23595	COG4651	solute:proton antiporter activity
NW96_RS23595	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
NW96_RS23650	COG1349	DNA-binding transcription factor activity
NW96_RS23655	COG2223	nitrite transmembrane transporter activity
NW96_RS23700	COG1063	alcohol dehydrogenase
NW96_RS23705	COG3842	ATPase activity
NW96_RS23715	COG1070	Carbohydrate kinase
NW96_RS23740	COG0243	molybdopterin cofactor binding
NW96_RS23745	COG2146	nitrite reductase [NAD(P)H] activity
NW96_RS23750	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NW96_RS23775	COG3707	response regulator
NW96_RS23780	COG1116	anion transmembrane transporter activity
NW96_RS23780	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
NW96_RS23790	COG0302	gtp cyclohydrolase
NW96_RS23830	COG0477	Major facilitator Superfamily
NW96_RS23885	COG2130	NADP-dependent
NW96_RS23890	COG1979	alcohol dehydrogenase
NW96_RS23955	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NW96_RS23970	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
NW96_RS23970	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
NW96_RS23970	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NW96_RS23970	COG3321	synthase
NW96_RS23995	COG0531	amino acid
NW96_RS24015	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NW96_RS24020	COG4122	O-methyltransferase activity
NW96_RS24030	COG5001	Diguanylate cyclase
NW96_RS24030	COG4251	negative regulation of phosphorylation
NW96_RS24030	COG3706	GGDEF domain
NW96_RS24030	COG2203	Gaf domain
NW96_RS24045	COG0583	DNA-binding transcription factor activity
NW96_RS24050	COG3485	protocatechuate 3,4-dioxygenase
NW96_RS24055	COG3485	protocatechuate 3,4-dioxygenase
NW96_RS24070	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NW96_RS24075	COG0601	transmembrane transport
NW96_RS24080	COG0747	negative chemotaxis
NW96_RS24090	COG4172	Belongs to the ABC transporter superfamily
NW96_RS24095	COG1446	asparaginase
NW96_RS24105	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
NW96_RS24150	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NW96_RS24160	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NW96_RS24170	COG0277	FAD linked oxidase domain protein
NW96_RS24225	COG2188	Transcriptional regulator
NW96_RS24230	COG2814	Major facilitator Superfamily
NW96_RS24245	COG1858	cytochrome C peroxidase
NW96_RS24250	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
NW96_RS24275	COG0456	acetyltransferase
NW96_RS24285	COG2391	methyltransferase activity
NW96_RS24290	COG0640	Transcriptional regulator
NW96_RS24300	COG3038	cytochrome b561
NW96_RS24310	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NW96_RS24315	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
NW96_RS24325	COG1045	serine acetyltransferase
NW96_RS24340	COG1505	serine-type exopeptidase activity
NW96_RS24360	COG1566	PFAM secretion protein HlyD family protein
NW96_RS24385	COG2814	Major facilitator Superfamily
NW96_RS24420	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
NW96_RS24445	COG0477	Major facilitator Superfamily
NW96_RS24455	COG0784	Response regulator, receiver
NW96_RS24460	COG4251	negative regulation of phosphorylation
NW96_RS24475	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NW96_RS24505	COG1278	Cold shock
NW96_RS24545	COG0446	pyridine nucleotide-disulphide oxidoreductase
NW96_RS24545	COG0404	The glycine cleavage system catalyzes the degradation of glycine
NW96_RS24645	COG1215	transferase activity, transferring glycosyl groups
NW96_RS24665	COG0318	PFAM AMP-dependent synthetase and ligase
NW96_RS24705	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS24715	COG0628	permease
NW96_RS24725	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
NW96_RS24740	COG1902	pentaerythritol trinitrate reductase activity
NW96_RS24760	COG1309	transcriptional regulator
NW96_RS24790	COG0642	Histidine kinase
NW96_RS24810	COG3842	ATPase activity
NW96_RS24825	COG2207	Transcriptional regulator
NW96_RS24835	COG3971	2-oxopent-4-enoate hydratase activity
NW96_RS24845	COG3384	dioxygenase
NW96_RS24850	COG1012	belongs to the aldehyde dehydrogenase family
NW96_RS24865	COG1846	Transcriptional regulator
NW96_RS24880	COG0745	RESPONSE REGULATOR receiver
NW96_RS24885	COG2205	protein histidine kinase activity
NW96_RS24940	COG2207	Transcriptional regulator
NW96_RS25000	COG1845	cytochrome c oxidase, subunit III
NW96_RS25020	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
NW96_RS25030	COG0477	Major facilitator Superfamily
NW96_RS25040	COG3214	Protein conserved in bacteria
NW96_RS25135	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NW96_RS25165	COG0642	Histidine kinase
NW96_RS25245	COG2205	protein histidine kinase activity
NW96_RS25250	COG0745	RESPONSE REGULATOR receiver
NW96_RS25260	COG2066	Belongs to the glutaminase family
NW96_RS25280	COG5295	Hep Hag repeat protein
NW96_RS25320	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
NW96_RS25325	COG1960	acyl-CoA dehydrogenase activity
NW96_RS25370	COG4638	Rieske (2fe-2S)
NW96_RS25450	COG1477	protein flavinylation
NW96_RS25455	COG1012	belongs to the aldehyde dehydrogenase family
NW96_RS25460	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
NW96_RS25475	COG0583	DNA-binding transcription factor activity
NW96_RS25490	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NW96_RS25515	COG1349	DNA-binding transcription factor activity
NW96_RS25525	COG2271	Major facilitator Superfamily
NW96_RS25535	COG0246	Mannitol dehydrogenase
NW96_RS25545	COG4948	Mandelate Racemase Muconate Lactonizing
NW96_RS25550	COG1063	alcohol dehydrogenase
NW96_RS25585	COG5441	Belongs to the UPF0261 family
NW96_RS25590	COG5564	TIM-barrel signal transduction protein
NW96_RS25625	COG3023	N-Acetylmuramoyl-L-alanine amidase
NW96_RS25635	COG5295	Hep Hag repeat protein
NW96_RS25770	COG0302	gtp cyclohydrolase
NW96_RS25815	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
NW96_RS25830	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NW96_RS25840	COG0531	amino acid
NW96_RS25850	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
NW96_RS25875	COG2259	Doxx family
NW96_RS25885	COG1620	l-lactate permease
NW96_RS25890	COG1556	Lactate utilization protein
NW96_RS25895	COG1139	Iron-sulfur cluster binding protein
NW96_RS25900	COG0247	lactate metabolic process
NW96_RS25905	COG2186	Transcriptional regulator
NW96_RS25935	COG2011	ABC-type metal ion transport system permease component
NW96_RS25940	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NW96_RS25960	COG2197	response regulator
NW96_RS26015	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS26015	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
NW96_RS26015	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NW96_RS26015	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NW96_RS26015	COG3321	synthase
NW96_RS26030	COG0019	diaminopimelate decarboxylase activity
NW96_RS26035	COG0318	PFAM AMP-dependent synthetase and ligase
NW96_RS26080	COG1301	dicarboxylic acid transport
NW96_RS26095	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NW96_RS26100	COG0657	acetylesterase activity
NW96_RS26105	COG0583	DNA-binding transcription factor activity
NW96_RS26145	COG0709	Synthesizes selenophosphate from selenide and ATP
NW96_RS26175	COG1414	Transcriptional regulator
NW96_RS26180	COG1288	antiporter activity
NW96_RS26190	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NW96_RS26235	COG0840	transmembrane signaling receptor activity
NW96_RS26250	COG0183	Belongs to the thiolase family
NW96_RS26260	COG1414	Transcriptional regulator
NW96_RS26265	COG1309	transcriptional regulator
NW96_RS26285	COG1473	amidohydrolase
NW96_RS26290	COG0583	DNA-binding transcription factor activity
NW96_RS26445	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
NW96_RS26460	COG2916	Histone family protein nucleoid-structuring protein H-NS
NW96_RS26495	COG4790	Type iii secretion
NW96_RS26640	COG0477	Major facilitator Superfamily
NW96_RS26670	COG1280	lysine exporter protein (LysE YggA)
NW96_RS26675	COG1522	sequence-specific DNA binding
NW96_RS26690	COG0306	phosphate transporter
NW96_RS26715	COG0318	PFAM AMP-dependent synthetase and ligase
NW96_RS26755	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
NW96_RS26765	COG4521	taurine ABC transporter
NW96_RS26770	COG2175	clavaminate synthase activity
NW96_RS26780	COG2194	sulfuric ester hydrolase activity
NW96_RS26785	COG1215	transferase activity, transferring glycosyl groups
NW96_RS26805	COG0457	Tetratricopeptide repeat
NW96_RS26810	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
NW96_RS26815	COG1215	transferase activity, transferring glycosyl groups
NW96_RS26830	COG3550	peptidyl-serine autophosphorylation
NW96_RS26960	COG1450	Type ii and iii secretion system protein
NW96_RS27005	COG2207	Transcriptional regulator
NW96_RS27040	COG4794	Type iii secretion
NW96_RS27055	COG4789	Type iii secretion
NW96_RS27060	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
NW96_RS27170	COG0028	Belongs to the TPP enzyme family
NW96_RS27175	COG0427	acetyl-CoA hydrolase
NW96_RS27180	COG2030	dehydratase
NW96_RS27190	COG0583	DNA-binding transcription factor activity
NW96_RS27210	COG2814	Major facilitator Superfamily
NW96_RS27220	COG4191	Histidine kinase
NW96_RS27260	COG3621	Patatin-like phospholipase
NW96_RS27300	COG1472	Belongs to the glycosyl hydrolase 3 family
NW96_RS27305	COG1472	Belongs to the glycosyl hydrolase 3 family
NW96_RS27315	COG0154	amidase activity
NW96_RS27335	COG3276	selenocysteine insertion sequence binding
NW96_RS27340	COG1921	L-seryl-tRNASec selenium transferase activity
NW96_RS27350	COG2864	formate dehydrogenase
NW96_RS27355	COG0437	4 iron, 4 sulfur cluster binding
NW96_RS27380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW96_RS27390	COG1126	abc transporter atp-binding protein
NW96_RS27395	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NW96_RS27400	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NW96_RS27410	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW96_RS27425	COG3608	succinylglutamate desuccinylase aspartoacylase
NW96_RS27445	COG1295	ribonuclease BN
NW96_RS27450	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS27470	COG2755	lipolytic protein G-D-S-L family
NW96_RS27470	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NW96_RS27480	COG1210	Utp--glucose-1-phosphate uridylyltransferase
NW96_RS27495	COG0438	transferase activity, transferring glycosyl groups
NW96_RS27520	COG2755	lipolytic protein G-D-S-L family
NW96_RS27520	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
NW96_RS27525	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
NW96_RS27570	COG0285	dihydrofolate synthase activity
NW96_RS27575	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NW96_RS27590	COG0133	tryptophan synthase activity
NW96_RS27595	COG0135	phosphoribosylanthranilate isomerase activity
NW96_RS27650	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NW96_RS27675	COG1522	sequence-specific DNA binding
NW96_RS27720	COG0372	Belongs to the citrate synthase family
NW96_RS27725	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
NW96_RS27730	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NW96_RS27735	COG1053	succinate dehydrogenase
NW96_RS27745	COG2009	succinate dehydrogenase
NW96_RS27755	COG2188	Transcriptional regulator
NW96_RS27780	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NW96_RS27785	COG3064	Membrane
NW96_RS27785	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
NW96_RS27785	COG3210	domain, Protein
NW96_RS27790	COG2831	hemolysin activation secretion protein
NW96_RS27815	COG1176	ABC-type spermidine putrescine transport system, permease component I
NW96_RS27825	COG3842	ATPase activity
NW96_RS27845	COG4771	TonB-dependent receptor
NW96_RS27855	COG3038	cytochrome b561
NW96_RS27900	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NW96_RS27905	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
NW96_RS28080	COG0583	DNA-binding transcription factor activity
NW96_RS28105	COG0477	Major facilitator Superfamily
NW96_RS28110	COG1104	cysteine desulfurase activity
NW96_RS28125	COG0477	Major facilitator Superfamily
NW96_RS28135	COG0583	DNA-binding transcription factor activity
NW96_RS28145	COG0179	Fumarylacetoacetate (FAA) hydrolase
NW96_RS28190	COG2916	Histone family protein nucleoid-structuring protein H-NS
NW96_RS28210	COG2610	gluconate transmembrane transporter activity
NW96_RS28255	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
NW96_RS28260	COG0601	transmembrane transport
NW96_RS28285	COG3104	oligopeptide transport
NW96_RS28330	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
NW96_RS28355	COG2081	HI0933 family
NW96_RS28360	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NW96_RS28380	COG0142	geranyltranstransferase activity
NW96_RS28405	COG0412	Dienelactone hydrolase
NW96_RS28425	COG1252	NADH dehydrogenase
NW96_RS28435	COG1611	Belongs to the LOG family
NW96_RS28455	COG1683	Conserved Protein
NW96_RS28495	COG4695	Portal protein
NW96_RS28505	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NW96_RS28530	COG1846	Transcriptional regulator
NW96_RS28535	COG1764	response to oxidative stress
NW96_RS28555	COG0725	ABC transporter, periplasmic molybdate-binding protein
NW96_RS28560	COG4149	molybdate abc transporter
NW96_RS28595	COG0583	DNA-binding transcription factor activity
NW96_RS28610	COG1253	flavin adenine dinucleotide binding
NW96_RS28615	COG0352	thiamine-phosphate diphosphorylase activity
NW96_RS28620	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NW96_RS28640	COG1304	FMN binding
NW96_RS28710	COG0247	lactate metabolic process
NW96_RS28715	COG1592	Rubrerythrin
NW96_RS28725	COG3023	N-Acetylmuramoyl-L-alanine amidase
NW96_RS28740	COG4941	Belongs to the sigma-70 factor family
NW96_RS28750	COG3795	YCII-related domain
NW96_RS28755	COG3795	YCII-related domain
NW96_RS28790	COG0628	permease
NW96_RS28825	COG2130	NADP-dependent
NW96_RS28845	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS28870	COG0583	DNA-binding transcription factor activity
NW96_RS28900	COG2837	iron assimilation
NW96_RS28910	COG5265	(ABC) transporter
NW96_RS28920	COG4977	sequence-specific DNA binding
NW96_RS28955	COG0038	chloride channel
NW96_RS28995	COG0840	transmembrane signaling receptor activity
NW96_RS29000	COG0642	Histidine kinase
NW96_RS29015	COG1012	belongs to the aldehyde dehydrogenase family
NW96_RS29025	COG0025	NhaP-type Na H and K H
NW96_RS29045	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NW96_RS29060	COG2146	nitrite reductase [NAD(P)H] activity
NW96_RS29065	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
NW96_RS29070	COG4638	Rieske (2fe-2S)
NW96_RS29100	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
NW96_RS29125	COG1902	pentaerythritol trinitrate reductase activity
NW96_RS29125	COG0446	pyridine nucleotide-disulphide oxidoreductase
NW96_RS29145	COG0583	DNA-binding transcription factor activity
NW96_RS29150	COG4638	Rieske (2fe-2S)
NW96_RS29155	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
NW96_RS29160	COG0633	Ferredoxin
NW96_RS29160	COG0543	2 iron, 2 sulfur cluster binding
NW96_RS29165	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS29185	COG1335	isochorismatase
NW96_RS29290	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
NW96_RS29320	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NW96_RS29340	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
NW96_RS29370	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS29395	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS29405	COG0438	transferase activity, transferring glycosyl groups
NW96_RS29415	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW96_RS29415	COG2198	Histidine kinase
NW96_RS29415	COG2205	protein histidine kinase activity
NW96_RS29415	COG0784	Response regulator, receiver
NW96_RS29430	COG2204	response regulator
NW96_RS29465	COG2192	nodulation
NW96_RS29470	COG0859	PFAM glycosyl transferase family 9
NW96_RS29475	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
NW96_RS29480	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS29490	COG5265	(ABC) transporter
NW96_RS29505	COG0688	phosphatidylethanolamine metabolic process
NW96_RS29510	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
NW96_RS29525	COG2084	Dehydrogenase
NW96_RS29530	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NW96_RS29540	COG2091	lysine biosynthetic process via aminoadipic acid
NW96_RS29560	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
NW96_RS29590	COG0022	dehydrogenase e1 component
NW96_RS29650	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
NW96_RS29710	COG2239	Acts as a magnesium transporter
NW96_RS29725	COG0071	Belongs to the small heat shock protein (HSP20) family
NW96_RS29765	COG2175	clavaminate synthase activity
NW96_RS29770	COG3246	L-lysine catabolic process to acetate
NW96_RS29785	COG0243	molybdopterin cofactor binding
NW96_RS29790	COG0437	4 iron, 4 sulfur cluster binding
NW96_RS29795	COG3302	dmso reductase anchor subunit
NW96_RS29860	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
NW96_RS29870	COG0154	amidase activity
NW96_RS29890	COG0454	-acetyltransferase
NW96_RS29890	COG0456	acetyltransferase
NW96_RS29910	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NW96_RS29975	COG5001	Diguanylate cyclase
NW96_RS29975	COG5002	protein histidine kinase activity
NW96_RS29975	COG3447	MASE1 domain protein
NW96_RS30020	COG1136	(ABC) transporter
NW96_RS30025	COG2072	flavoprotein involved in K transport
NW96_RS30035	COG1028	Short-chain dehydrogenase reductase Sdr
NW96_RS30060	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
NW96_RS30070	COG1126	abc transporter atp-binding protein
NW96_RS30075	COG0765	amino acid transport
NW96_RS30080	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
NW96_RS30095	COG1657	PFAM Prenyltransferase squalene oxidase
NW96_RS30105	COG1562	ergosterol biosynthetic process
NW96_RS30150	COG1595	DNA-templated transcription, initiation
NW96_RS30160	COG1393	Belongs to the ArsC family
NW96_RS30165	COG1192	Involved in chromosome partitioning