NW96_RS00005	SM00382	ATPases associated with a variety of cellular activities
NW96_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
NW96_RS00010	SM00480	DNA polymerase III beta subunit
NW96_RS00020	SM00387	Histidine kinase-like ATPases
NW96_RS00020	SM00433	TopoisomeraseII
NW96_RS00090	SM00240	Forkhead associated domain
NW96_RS00095	SM00220	Serine/Threonine protein kinases, catalytic domain
NW96_RS00115	SM01007	Class II Aldolase and Adducin N-terminal domain
NW96_RS00130	SM00052	Putative diguanylate phosphodiesterase
NW96_RS00130	SM00267	diguanylate cyclase
NW96_RS00175	SM00382	ATPases associated with a variety of cellular activities
NW96_RS00220	SM00419	helix_turn_helix, cAMP Regulatory protein
NW96_RS00270	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS00295	SM00363	S4 RNA-binding domain
NW96_RS00305	SM00855	Phosphoglycerate mutase family
NW96_RS00320	SM00382	ATPases associated with a variety of cellular activities
NW96_RS00325	SM00278	Helix-hairpin-helix DNA-binding motif class 1
NW96_RS00340	SM00798	AICARFT/IMPCHase bienzyme
NW96_RS00340	SM00851	MGS-like domain
NW96_RS00360	SM01011	Aminopeptidase P, N-terminal domain
NW96_RS00395	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
NW96_RS00395	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
NW96_RS00450	SM00981	NW96_RS00450
NW96_RS00495	SM00867	YceI-like domain 
NW96_RS00500	SM00867	YceI-like domain 
NW96_RS00525	SM01323	NW96_RS00525
NW96_RS00545	SM00487	DEAD-like helicases superfamily
NW96_RS00545	SM00490	helicase superfamily c-terminal domain
NW96_RS00590	SM00072	Guanylate kinase homologues.
NW96_RS00600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS00600	SM00866	NW96_RS00600
NW96_RS00630	SM00382	ATPases associated with a variety of cellular activities
NW96_RS00635	SM00382	ATPases associated with a variety of cellular activities
NW96_RS00645	SM00382	ATPases associated with a variety of cellular activities
NW96_RS00775	SM00883	Chaperonin 10 Kd subunit
NW96_RS00790	SM00382	ATPases associated with a variety of cellular activities
NW96_RS00805	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS00810	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
NW96_RS01005	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW96_RS01025	SM00382	ATPases associated with a variety of cellular activities
NW96_RS01060	SM00464	Found in ATP-dependent protease La (LON)
NW96_RS01065	SM00478	endonuclease III
NW96_RS01070	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
NW96_RS01070	SM01232	NW96_RS01070
NW96_RS01075	SM00028	Tetratricopeptide repeats
NW96_RS01095	SM01400	NW96_RS01095
NW96_RS01135	SM00382	ATPases associated with a variety of cellular activities
NW96_RS01135	SM00962	SRP54-type protein, GTPase domain
NW96_RS01135	SM00963	SRP54-type protein, helical bundle domain
NW96_RS01160	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW96_RS01225	SM00382	ATPases associated with a variety of cellular activities
NW96_RS01240	SM00481	DNA polymerase alpha chain like domain
NW96_RS01275	SM00382	ATPases associated with a variety of cellular activities
NW96_RS01360	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS01360	SM00866	NW96_RS01360
NW96_RS01385	SM01081	Putative carbohydrate binding domain
NW96_RS01475	SM00422	helix_turn_helix, mercury resistance
NW96_RS01500	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS01560	SM00487	DEAD-like helicases superfamily
NW96_RS01560	SM00490	helicase superfamily c-terminal domain
NW96_RS01575	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS01610	SM00382	ATPases associated with a variety of cellular activities
NW96_RS01660	SM00470	ParB-like nuclease domain
NW96_RS01675	SM01228	NW96_RS01675
NW96_RS01680	SM00382	ATPases associated with a variety of cellular activities
NW96_RS01685	SM00382	ATPases associated with a variety of cellular activities
NW96_RS01720	SM00382	ATPases associated with a variety of cellular activities
NW96_RS01725	SM00382	ATPases associated with a variety of cellular activities
NW96_RS01760	SM01118	NW96_RS01760
NW96_RS01765	SM00344	helix_turn_helix ASNC type
NW96_RS01785	SM00448	cheY-homologous receiver domain
NW96_RS01785	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS01790	SM00387	Histidine kinase-like ATPases
NW96_RS01790	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS01805	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
NW96_RS01820	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS01855	SM00411	bacterial (prokaryotic) histone like domain
NW96_RS01875	SM00849	Metallo-beta-lactamase superfamily
NW96_RS01885	SM00344	helix_turn_helix ASNC type
NW96_RS01895	SM00528	Domain in histone-like proteins of HNS family
NW96_RS01960	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS01960	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS02040	SM00822	NW96_RS02040
NW96_RS02065	SM00028	Tetratricopeptide repeats
NW96_RS02125	SM00528	Domain in histone-like proteins of HNS family
NW96_RS02165	SM00448	cheY-homologous receiver domain
NW96_RS02170	SM00073	Histidine Phosphotransfer domain
NW96_RS02170	SM00260	Two component signalling adaptor domain
NW96_RS02170	SM00387	Histidine kinase-like ATPases
NW96_RS02170	SM01231	NW96_RS02170
NW96_RS02175	SM00260	Two component signalling adaptor domain
NW96_RS02180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS02180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS02185	SM00138	Methyltransferase, chemotaxis proteins 
NW96_RS02195	SM00448	cheY-homologous receiver domain
NW96_RS02205	SM00448	cheY-homologous receiver domain
NW96_RS02245	SM00382	ATPases associated with a variety of cellular activities
NW96_RS02245	SM00962	SRP54-type protein, GTPase domain
NW96_RS02260	SM00996	S-adenosyl-L-homocysteine hydrolase
NW96_RS02260	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
NW96_RS02315	SM00382	ATPases associated with a variety of cellular activities
NW96_RS02315	SM01086	C-terminal, D2-small domain, of ClpB protein
NW96_RS02360	SM00382	ATPases associated with a variety of cellular activities
NW96_RS02415	SM00769	Water Stress and Hypersensitive response
NW96_RS02510	SM00749	bacterial OsmY and nodulation domain
NW96_RS02545	SM00357	Cold shock protein domain
NW96_RS02575	SM00965	Secretin and TonB N terminus short domain
NW96_RS02590	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NW96_RS02610	SM00382	ATPases associated with a variety of cellular activities
NW96_RS02625	SM01321	NW96_RS02625
NW96_RS02655	SM00382	ATPases associated with a variety of cellular activities
NW96_RS02680	SM00382	ATPases associated with a variety of cellular activities
NW96_RS02715	SM00382	ATPases associated with a variety of cellular activities
NW96_RS02815	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW96_RS02895	SM00422	helix_turn_helix, mercury resistance
NW96_RS02915	SM00382	ATPases associated with a variety of cellular activities
NW96_RS02925	SM00387	Histidine kinase-like ATPases
NW96_RS02925	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS02930	SM00448	cheY-homologous receiver domain
NW96_RS02930	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS02970	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS02975	SM00382	ATPases associated with a variety of cellular activities
NW96_RS02985	SM00382	ATPases associated with a variety of cellular activities
NW96_RS03070	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS03180	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS03250	SM00382	ATPases associated with a variety of cellular activities
NW96_RS03270	SM00833	Cobalamin synthesis protein cobW C-terminal domain
NW96_RS03280	SM01219	NW96_RS03280
NW96_RS03330	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS03330	SM00895	NW96_RS03330
NW96_RS03350	SM00947	Carbonic anhydrase
NW96_RS03355	SM01116	NW96_RS03355
NW96_RS03375	SM00861	Transketolase, pyrimidine binding domain
NW96_RS03410	SM00919	Malic enzyme, NAD binding domain
NW96_RS03410	SM01274	NW96_RS03410
NW96_RS03430	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
NW96_RS03440	SM00822	NW96_RS03440
NW96_RS03450	SM00382	ATPases associated with a variety of cellular activities
NW96_RS03460	SM00822	NW96_RS03460
NW96_RS03475	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS03505	SM00955	NW96_RS03505
NW96_RS03540	SM00878	Biotin carboxylase C-terminal domain
NW96_RS03600	SM00644	NW96_RS03600
NW96_RS03615	SM00382	ATPases associated with a variety of cellular activities
NW96_RS03615	SM00962	SRP54-type protein, GTPase domain
NW96_RS03615	SM00963	SRP54-type protein, helical bundle domain
NW96_RS03685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS03685	SM00895	NW96_RS03685
NW96_RS03705	SM00947	Carbonic anhydrase
NW96_RS03710	SM01116	NW96_RS03710
NW96_RS03765	SM00919	Malic enzyme, NAD binding domain
NW96_RS03765	SM01274	NW96_RS03765
NW96_RS03785	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
NW96_RS03795	SM00822	NW96_RS03795
NW96_RS03805	SM00382	ATPases associated with a variety of cellular activities
NW96_RS03815	SM00822	NW96_RS03815
NW96_RS03830	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS03860	SM00955	NW96_RS03860
NW96_RS03895	SM00878	Biotin carboxylase C-terminal domain
NW96_RS04010	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
NW96_RS04055	SM01091	Transporter associated domain
NW96_RS04060	SM00382	ATPases associated with a variety of cellular activities
NW96_RS04095	SM00382	ATPases associated with a variety of cellular activities
NW96_RS04105	SM00957	SecA DEAD-like domain
NW96_RS04105	SM00958	SecA preprotein cross-linking domain
NW96_RS04130	SM00864	Tubulin/FtsZ family, GTPase domain
NW96_RS04130	SM00865	Tubulin/FtsZ family, C-terminal domain
NW96_RS04140	SM00842	Cell division protein FtsA
NW96_RS04225	SM01018	B12 binding domain
NW96_RS04250	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS04310	SM00671	Sel1-like repeats.
NW96_RS04325	SM00382	ATPases associated with a variety of cellular activities
NW96_RS04360	SM00936	Penicillin-binding protein 5, C-terminal domain 
NW96_RS04390	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS04460	SM00382	ATPases associated with a variety of cellular activities
NW96_RS04460	SM00448	cheY-homologous receiver domain
NW96_RS04500	SM00382	ATPases associated with a variety of cellular activities
NW96_RS04510	SM00938	Nitrogen regulatory protein P-II
NW96_RS04680	SM00047	Lysozyme subfamily 2
NW96_RS04730	SM00858	NW96_RS04730
NW96_RS04795	SM00796	Allophanate hydrolase subunit 1
NW96_RS04800	SM00797	Allophanate hydrolase subunit 2
NW96_RS04830	SM00382	ATPases associated with a variety of cellular activities
NW96_RS04835	SM00382	ATPases associated with a variety of cellular activities
NW96_RS04875	SM00382	ATPases associated with a variety of cellular activities
NW96_RS04910	SM00421	helix_turn_helix, Lux Regulon
NW96_RS04910	SM00448	cheY-homologous receiver domain
NW96_RS04970	SM00382	ATPases associated with a variety of cellular activities
NW96_RS05085	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
NW96_RS05090	SM00833	Cobalamin synthesis protein cobW C-terminal domain
NW96_RS05115	SM00382	ATPases associated with a variety of cellular activities
NW96_RS05115	SM01086	C-terminal, D2-small domain, of ClpB protein
NW96_RS05120	SM00448	cheY-homologous receiver domain
NW96_RS05125	SM00387	Histidine kinase-like ATPases
NW96_RS05125	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS05170	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS05185	SM00829	Enoylreductase
NW96_RS05235	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW96_RS05235	SM00245	tail specific protease
NW96_RS05240	SM00855	Phosphoglycerate mutase family
NW96_RS05245	SM00450	Rhodanese Homology Domain
NW96_RS05265	SM00506	Appr-1"-p processing enzyme
NW96_RS05360	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS05360	SM01049	NW96_RS05360
NW96_RS05405	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS05535	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
NW96_RS05535	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
NW96_RS05540	SM00649	Ribosomal protein L11/L12
NW96_RS05565	SM00663	RNA polymerase I subunit A N-terminus
NW96_RS05580	SM00341	Helicase and RNase D C-terminal
NW96_RS05580	SM00487	DEAD-like helicases superfamily
NW96_RS05580	SM00490	helicase superfamily c-terminal domain
NW96_RS05580	SM00956	NW96_RS05580
NW96_RS05595	SM00838	Elongation factor G C-terminus
NW96_RS05595	SM00889	Elongation factor G, domain IV
NW96_RS05605	SM01403	NW96_RS05605
NW96_RS05625	SM01382	NW96_RS05625
NW96_RS05625	SM01383	NW96_RS05625
NW96_RS05640	SM00322	K homology RNA-binding domain
NW96_RS05660	SM01374	NW96_RS05660
NW96_RS05715	SM00316	Ribosomal protein S1-like RNA-binding domain
NW96_RS05735	SM00363	S4 RNA-binding domain
NW96_RS05735	SM01390	NW96_RS05735
NW96_RS05740	SM00662	RNA polymerases D
NW96_RS05760	SM01004	Delta-aminolevulinic acid dehydratase
NW96_RS05825	SM00859	Semialdehyde dehydrogenase, NAD binding domain
NW96_RS05855	SM00919	Malic enzyme, NAD binding domain
NW96_RS05855	SM01274	NW96_RS05855
NW96_RS05890	SM00344	helix_turn_helix ASNC type
NW96_RS06005	SM00836	DALR anticodon binding domain
NW96_RS06005	SM01016	Arginyl tRNA synthetase N terminal dom
NW96_RS06035	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS06050	SM00382	ATPases associated with a variety of cellular activities
NW96_RS06055	SM00849	Metallo-beta-lactamase superfamily
NW96_RS06070	SM00947	Carbonic anhydrase
NW96_RS06110	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS06110	SM00876	Biotin and Thiamin Synthesis associated domain
NW96_RS06130	SM00098	Alkaline phosphatase homologues
NW96_RS06135	SM00098	Alkaline phosphatase homologues
NW96_RS06180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS06185	SM00354	helix_turn _helix lactose operon repressor
NW96_RS06220	SM00905	Dihydroneopterin aldolase
NW96_RS06300	SM00746	metallochaperone-like domain
NW96_RS06380	SM00382	ATPases associated with a variety of cellular activities
NW96_RS06400	SM00363	S4 RNA-binding domain
NW96_RS06420	SM00271	DnaJ molecular chaperone homology domain
NW96_RS06485	SM00853	MutL C terminal dimerisation domain
NW96_RS06485	SM01340	NW96_RS06485
NW96_RS06535	SM00382	ATPases associated with a variety of cellular activities
NW96_RS06610	SM00822	NW96_RS06610
NW96_RS06610	SM00823	Phosphopantetheine attachment site
NW96_RS06610	SM00825	Beta-ketoacyl synthase
NW96_RS06610	SM00826	NW96_RS06610
NW96_RS06610	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NW96_RS06610	SM00829	Enoylreductase
NW96_RS06610	SM01294	NW96_RS06610
NW96_RS06660	SM00838	Elongation factor G C-terminus
NW96_RS06660	SM00889	Elongation factor G, domain IV
NW96_RS06705	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS06705	SM00866	NW96_RS06705
NW96_RS06735	SM00052	Putative diguanylate phosphodiesterase
NW96_RS06760	SM00100	Cyclic nucleotide-monophosphate binding domain
NW96_RS06760	SM00419	helix_turn_helix, cAMP Regulatory protein
NW96_RS06825	SM00357	Cold shock protein domain
NW96_RS06835	SM00382	ATPases associated with a variety of cellular activities
NW96_RS06835	SM01086	C-terminal, D2-small domain, of ClpB protein
NW96_RS06880	SM00904	Riboflavin kinase
NW96_RS06980	SM00316	Ribosomal protein S1-like RNA-binding domain
NW96_RS07015	SM00382	ATPases associated with a variety of cellular activities
NW96_RS07020	SM00387	Histidine kinase-like ATPases
NW96_RS07020	SM00433	TopoisomeraseII
NW96_RS07025	SM00434	DNA Topoisomerase IV
NW96_RS07095	SM00052	Putative diguanylate phosphodiesterase
NW96_RS07095	SM00267	diguanylate cyclase
NW96_RS07175	SM00988	UreE urease accessory protein, N-terminal domain
NW96_RS07200	SM00382	ATPases associated with a variety of cellular activities
NW96_RS07235	SM00450	Rhodanese Homology Domain
NW96_RS07240	SM00650	Ribosomal RNA adenine dimethylases
NW96_RS07250	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS07450	SM00382	ATPases associated with a variety of cellular activities
NW96_RS07460	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS07500	SM00382	ATPases associated with a variety of cellular activities
NW96_RS07510	SM00463	Small MutS-related domain
NW96_RS07520	SM00843	NW96_RS07520
NW96_RS07535	SM00382	ATPases associated with a variety of cellular activities
NW96_RS07645	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS07665	SM00072	Guanylate kinase homologues.
NW96_RS07670	SM01409	NW96_RS07670
NW96_RS07675	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NW96_RS07675	SM00954	Region found in RelA / SpoT proteins
NW96_RS07835	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS07860	SM00849	Metallo-beta-lactamase superfamily
NW96_RS07935	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS07955	SM01092	CO dehydrogenase flavoprotein C-terminal domain
NW96_RS07960	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
NW96_RS07990	SM00382	ATPases associated with a variety of cellular activities
NW96_RS08075	SM00530	Helix-turn-helix XRE-family like proteins 
NW96_RS08080	SM00849	Metallo-beta-lactamase superfamily
NW96_RS08125	SM00829	Enoylreductase
NW96_RS08145	SM00883	Chaperonin 10 Kd subunit
NW96_RS08175	SM00732	Likely ribonuclease with RNase H fold.
NW96_RS08195	SM00563	Phosphate acyltransferases
NW96_RS08230	SM00382	ATPases associated with a variety of cellular activities
NW96_RS08295	SM00382	ATPases associated with a variety of cellular activities
NW96_RS08300	SM00382	ATPases associated with a variety of cellular activities
NW96_RS08370	SM01130	NW96_RS08370
NW96_RS08375	SM01007	Class II Aldolase and Adducin N-terminal domain
NW96_RS08380	SM00530	Helix-turn-helix XRE-family like proteins 
NW96_RS08410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS08420	SM00387	Histidine kinase-like ATPases
NW96_RS08430	SM00986	Uracil DNA glycosylase superfamily
NW96_RS08430	SM00987	UreE urease accessory protein, C-terminal domain 
NW96_RS08475	SM00382	ATPases associated with a variety of cellular activities
NW96_RS08515	SM00478	endonuclease III
NW96_RS08555	SM00382	ATPases associated with a variety of cellular activities
NW96_RS08555	SM00843	NW96_RS08555
NW96_RS08590	SM00487	DEAD-like helicases superfamily
NW96_RS08590	SM00490	helicase superfamily c-terminal domain
NW96_RS08605	SM00450	Rhodanese Homology Domain
NW96_RS08615	SM00481	DNA polymerase alpha chain like domain
NW96_RS08620	SM00382	ATPases associated with a variety of cellular activities
NW96_RS08760	SM00316	Ribosomal protein S1-like RNA-binding domain
NW96_RS08790	SM01209	NW96_RS08790
NW96_RS08790	SM01210	NW96_RS08790
NW96_RS08815	SM00851	MGS-like domain
NW96_RS08825	SM00829	Enoylreductase
NW96_RS08865	SM00448	cheY-homologous receiver domain
NW96_RS08865	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS08900	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NW96_RS09035	SM00947	Carbonic anhydrase
NW96_RS09055	SM01387	NW96_RS09055
NW96_RS09065	SM00316	Ribosomal protein S1-like RNA-binding domain
NW96_RS09065	SM00322	K homology RNA-binding domain
NW96_RS09070	SM00829	Enoylreductase
NW96_RS09115	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
NW96_RS09120	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
NW96_RS09195	SM00710	Parallel beta-helix repeats
NW96_RS09215	SM00855	Phosphoglycerate mutase family
NW96_RS09245	SM00631	NW96_RS09245
NW96_RS09260	SM00421	helix_turn_helix, Lux Regulon
NW96_RS09345	SM00344	helix_turn_helix ASNC type
NW96_RS09350	SM00382	ATPases associated with a variety of cellular activities
NW96_RS09530	SM00382	ATPases associated with a variety of cellular activities
NW96_RS09560	SM00354	helix_turn _helix lactose operon repressor
NW96_RS09595	SM00267	diguanylate cyclase
NW96_RS09620	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS09625	SM00344	helix_turn_helix ASNC type
NW96_RS09685	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS09795	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NW96_RS09855	SM00479	NW96_RS09855
NW96_RS09870	SM00849	Metallo-beta-lactamase superfamily
NW96_RS09875	SM00257	Lysin motif
NW96_RS09895	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS09905	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
NW96_RS09915	SM00851	MGS-like domain
NW96_RS09915	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
NW96_RS09930	SM01103	NW96_RS09930
NW96_RS09940	SM00382	ATPases associated with a variety of cellular activities
NW96_RS09975	SM00382	ATPases associated with a variety of cellular activities
NW96_RS09985	SM00448	cheY-homologous receiver domain
NW96_RS09985	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS09990	SM00387	Histidine kinase-like ATPases
NW96_RS09990	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS10055	SM00855	Phosphoglycerate mutase family
NW96_RS10095	SM00257	Lysin motif
NW96_RS10135	SM00422	helix_turn_helix, mercury resistance
NW96_RS10140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS10160	SM00642	Alpha-amylase domain
NW96_RS10170	SM00642	Alpha-amylase domain
NW96_RS10175	SM00642	Alpha-amylase domain
NW96_RS10185	SM00642	Alpha-amylase domain
NW96_RS10190	SM00642	Alpha-amylase domain
NW96_RS10205	SM00060	Fibronectin type 3 domain
NW96_RS10245	SM00448	cheY-homologous receiver domain
NW96_RS10245	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS10270	SM00448	cheY-homologous receiver domain
NW96_RS10270	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS10290	SM00028	Tetratricopeptide repeats
NW96_RS10295	SM00528	Domain in histone-like proteins of HNS family
NW96_RS10315	SM00458	Ricin-type beta-trefoil
NW96_RS10315	SM00612	NW96_RS10315
NW96_RS10455	SM00972	Spore Coat Protein U domain
NW96_RS10460	SM00972	Spore Coat Protein U domain
NW96_RS10465	SM00972	Spore Coat Protein U domain
NW96_RS10480	SM00972	Spore Coat Protein U domain
NW96_RS10490	SM00387	Histidine kinase-like ATPases
NW96_RS10490	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS10490	SM00448	cheY-homologous receiver domain
NW96_RS10495	SM00421	helix_turn_helix, Lux Regulon
NW96_RS10495	SM00448	cheY-homologous receiver domain
NW96_RS10600	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NW96_RS10680	SM00382	ATPases associated with a variety of cellular activities
NW96_RS10685	SM00382	ATPases associated with a variety of cellular activities
NW96_RS10710	SM00382	ATPases associated with a variety of cellular activities
NW96_RS10755	SM00448	cheY-homologous receiver domain
NW96_RS10755	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS10765	SM00387	Histidine kinase-like ATPases
NW96_RS10765	SM01080	NW96_RS10765
NW96_RS10800	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS10885	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW96_RS11000	SM00861	Transketolase, pyrimidine binding domain
NW96_RS11015	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS11055	SM00316	Ribosomal protein S1-like RNA-binding domain
NW96_RS11055	SM00322	K homology RNA-binding domain
NW96_RS11065	SM00363	S4 RNA-binding domain
NW96_RS11170	SM00422	helix_turn_helix, mercury resistance
NW96_RS11175	SM00411	bacterial (prokaryotic) histone like domain
NW96_RS11180	SM00873	B3/4 domain
NW96_RS11180	SM00874	tRNA synthetase B5 domain
NW96_RS11180	SM00896	Ferredoxin-fold anticodon binding domain
NW96_RS11205	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NW96_RS11215	SM00954	Region found in RelA / SpoT proteins
NW96_RS11260	SM00882	Coenzyme A transferase
NW96_RS11265	SM00882	Coenzyme A transferase
NW96_RS11275	SM00421	helix_turn_helix, Lux Regulon
NW96_RS11305	SM00822	NW96_RS11305
NW96_RS11335	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
NW96_RS11340	SM00923	MbtH-like protein
NW96_RS11350	SM00823	Phosphopantetheine attachment site
NW96_RS11350	SM00824	Thioesterase
NW96_RS11375	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS11385	SM00260	Two component signalling adaptor domain
NW96_RS11390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS11445	SM00382	ATPases associated with a variety of cellular activities
NW96_RS11515	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS11525	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS11585	SM00495	Chitin-binding domain type 3
NW96_RS11620	SM00382	ATPases associated with a variety of cellular activities
NW96_RS11635	SM00833	Cobalamin synthesis protein cobW C-terminal domain
NW96_RS11685	SM00823	Phosphopantetheine attachment site
NW96_RS11695	SM00382	ATPases associated with a variety of cellular activities
NW96_RS11730	SM00382	ATPases associated with a variety of cellular activities
NW96_RS11740	SM00923	MbtH-like protein
NW96_RS11755	SM00822	NW96_RS11755
NW96_RS11780	SM00382	ATPases associated with a variety of cellular activities
NW96_RS11790	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS11825	SM00382	ATPases associated with a variety of cellular activities
NW96_RS11880	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS11910	SM00382	ATPases associated with a variety of cellular activities
NW96_RS11955	SM00382	ATPases associated with a variety of cellular activities
NW96_RS11990	SM00763	PrkA AAA domain
NW96_RS12010	SM00382	ATPases associated with a variety of cellular activities
NW96_RS12060	SM00382	ATPases associated with a variety of cellular activities
NW96_RS12170	SM00382	ATPases associated with a variety of cellular activities
NW96_RS12240	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS12240	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
NW96_RS12260	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS12260	SM00895	NW96_RS12260
NW96_RS12270	SM00644	NW96_RS12270
NW96_RS12280	SM00967	RNA 2'-O ribose methyltransferase substrate binding
NW96_RS12285	SM00316	Ribosomal protein S1-like RNA-binding domain
NW96_RS12285	SM00357	Cold shock protein domain
NW96_RS12285	SM00955	NW96_RS12285
NW96_RS12305	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS12305	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS12385	SM00382	ATPases associated with a variety of cellular activities
NW96_RS12400	SM00028	Tetratricopeptide repeats
NW96_RS12430	SM00858	NW96_RS12430
NW96_RS12475	SM00382	ATPases associated with a variety of cellular activities
NW96_RS12525	SM00382	ATPases associated with a variety of cellular activities
NW96_RS12540	SM00382	ATPases associated with a variety of cellular activities
NW96_RS12590	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS12625	SM00363	S4 RNA-binding domain
NW96_RS12635	SM00491	NW96_RS12635
NW96_RS12650	SM00316	Ribosomal protein S1-like RNA-binding domain
NW96_RS12650	SM00732	Likely ribonuclease with RNase H fold.
NW96_RS12675	SM00788	Adenylosuccinate synthetase
NW96_RS12690	SM00244	prohibitin homologues
NW96_RS12695	SM00244	prohibitin homologues
NW96_RS12710	SM00382	ATPases associated with a variety of cellular activities
NW96_RS12715	SM00564	beta-propeller repeat
NW96_RS12735	SM00530	Helix-turn-helix XRE-family like proteins 
NW96_RS12745	SM00562	NW96_RS12745
NW96_RS12780	SM00257	Lysin motif
NW96_RS12800	SM00493	NW96_RS12800
NW96_RS12810	SM00382	ATPases associated with a variety of cellular activities
NW96_RS12830	SM00357	Cold shock protein domain
NW96_RS12830	SM00382	ATPases associated with a variety of cellular activities
NW96_RS12830	SM00959	Rho termination factor, N-terminal domain
NW96_RS12835	SM00422	helix_turn_helix, mercury resistance
NW96_RS12880	SM00422	helix_turn_helix, mercury resistance
NW96_RS12895	SM00382	ATPases associated with a variety of cellular activities
NW96_RS12895	SM01086	C-terminal, D2-small domain, of ClpB protein
NW96_RS12920	SM00852	Probable molybdopterin binding domain
NW96_RS12995	SM00670	Large family of predicted nucleotide-binding domains
NW96_RS13020	SM00382	ATPases associated with a variety of cellular activities
NW96_RS13085	SM00870	NW96_RS13085
NW96_RS13140	SM00248	ankyrin repeats
NW96_RS13190	SM00829	Enoylreductase
NW96_RS13200	SM00886	Stress responsive A/B Barrel Domain
NW96_RS13280	SM01211	NW96_RS13280
NW96_RS13310	SM00382	ATPases associated with a variety of cellular activities
NW96_RS13385	SM00382	ATPases associated with a variety of cellular activities
NW96_RS13385	SM00464	Found in ATP-dependent protease La (LON)
NW96_RS13390	SM00382	ATPases associated with a variety of cellular activities
NW96_RS13390	SM00994	ClpX C4-type zinc finger
NW96_RS13390	SM01086	C-terminal, D2-small domain, of ClpB protein
NW96_RS13420	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS13435	SM00421	helix_turn_helix, Lux Regulon
NW96_RS13460	SM00155	Phospholipase D. Active site motifs.
NW96_RS13510	SM00448	cheY-homologous receiver domain
NW96_RS13510	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS13515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS13515	SM00387	Histidine kinase-like ATPases
NW96_RS13515	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS13540	SM00487	DEAD-like helicases superfamily
NW96_RS13540	SM00490	helicase superfamily c-terminal domain
NW96_RS13540	SM00982	NW96_RS13540
NW96_RS13540	SM01058	CarD-like/TRCF domain
NW96_RS13650	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS13650	SM00895	NW96_RS13650
NW96_RS13735	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW96_RS13735	SM01240	NW96_RS13735
NW96_RS13780	SM00244	prohibitin homologues
NW96_RS13810	SM00944	Pro-kumamolisin, activation domain
NW96_RS13860	SM00935	Outer membrane protein (OmpH-like)
NW96_RS13870	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW96_RS13920	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NW96_RS13925	SM00363	S4 RNA-binding domain
NW96_RS13935	SM00278	Helix-hairpin-helix DNA-binding motif class 1
NW96_RS13935	SM00292	breast cancer carboxy-terminal domain
NW96_RS13935	SM00532	Ligase N family
NW96_RS13945	SM00771	ZipA, C-terminal domain (FtsZ-binding)
NW96_RS13950	SM00968	SMC proteins Flexible Hinge Domain
NW96_RS13995	SM00155	Phospholipase D. Active site motifs.
NW96_RS14005	SM00382	ATPases associated with a variety of cellular activities
NW96_RS14015	SM00382	ATPases associated with a variety of cellular activities
NW96_RS14020	SM01005	Alanine racemase, C-terminal domain
NW96_RS14045	SM00986	Uracil DNA glycosylase superfamily
NW96_RS14045	SM00987	UreE urease accessory protein, C-terminal domain 
NW96_RS14065	SM00487	DEAD-like helicases superfamily
NW96_RS14065	SM00490	helicase superfamily c-terminal domain
NW96_RS14115	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS14165	SM00382	ATPases associated with a variety of cellular activities
NW96_RS14205	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW96_RS14290	SM00861	Transketolase, pyrimidine binding domain
NW96_RS14325	SM00823	Phosphopantetheine attachment site
NW96_RS14325	SM01294	NW96_RS14325
NW96_RS14345	SM00823	Phosphopantetheine attachment site
NW96_RS14390	SM00869	Autotransporter beta-domain
NW96_RS14425	SM00977	TilS substrate C-terminal domain
NW96_RS14435	SM00478	endonuclease III
NW96_RS14440	SM00840	NW96_RS14440
NW96_RS14445	SM00028	Tetratricopeptide repeats
NW96_RS14510	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
NW96_RS14510	SM00534	ATPase domain of DNA mismatch repair MUTS family
NW96_RS14525	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
NW96_RS14540	SM00849	Metallo-beta-lactamase superfamily
NW96_RS14550	SM01130	NW96_RS14550
NW96_RS14575	SM00481	DNA polymerase alpha chain like domain
NW96_RS14620	SM01192	NW96_RS14620
NW96_RS14620	SM01193	NW96_RS14620
NW96_RS14645	SM00849	Metallo-beta-lactamase superfamily
NW96_RS14655	SM00382	ATPases associated with a variety of cellular activities
NW96_RS14715	SM00271	DnaJ molecular chaperone homology domain
NW96_RS14740	SM00226	Low molecular weight phosphatase family
NW96_RS14765	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS14815	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
NW96_RS14815	SM00091	PAS domain
NW96_RS14815	SM00387	Histidine kinase-like ATPases
NW96_RS14815	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS14820	SM00421	helix_turn_helix, Lux Regulon
NW96_RS14820	SM00448	cheY-homologous receiver domain
NW96_RS14870	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW96_RS14890	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS14890	SM00387	Histidine kinase-like ATPases
NW96_RS14895	SM00421	helix_turn_helix, Lux Regulon
NW96_RS14895	SM00448	cheY-homologous receiver domain
NW96_RS14910	SM00382	ATPases associated with a variety of cellular activities
NW96_RS14910	SM00448	cheY-homologous receiver domain
NW96_RS14915	SM00387	Histidine kinase-like ATPases
NW96_RS14915	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS14920	SM01230	NW96_RS14920
NW96_RS14930	SM00450	Rhodanese Homology Domain
NW96_RS14935	SM00852	Probable molybdopterin binding domain
NW96_RS14960	SM00382	ATPases associated with a variety of cellular activities
NW96_RS14960	SM00487	DEAD-like helicases superfamily
NW96_RS14960	SM00490	helicase superfamily c-terminal domain
NW96_RS14960	SM00847	Helicase associated domain (HA2)  Add an annotation
NW96_RS15130	SM00382	ATPases associated with a variety of cellular activities
NW96_RS15155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS15155	SM00387	Histidine kinase-like ATPases
NW96_RS15155	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS15160	SM00448	cheY-homologous receiver domain
NW96_RS15160	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS15180	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS15195	SM00382	ATPases associated with a variety of cellular activities
NW96_RS15205	SM00938	Nitrogen regulatory protein P-II
NW96_RS15230	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS15260	SM00028	Tetratricopeptide repeats
NW96_RS15300	SM00530	Helix-turn-helix XRE-family like proteins 
NW96_RS15310	SM00972	Spore Coat Protein U domain
NW96_RS15315	SM00972	Spore Coat Protein U domain
NW96_RS15480	SM00855	Phosphoglycerate mutase family
NW96_RS15495	SM00382	ATPases associated with a variety of cellular activities
NW96_RS15655	SM01230	NW96_RS15655
NW96_RS15715	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS15715	SM00866	NW96_RS15715
NW96_RS15745	SM00421	helix_turn_helix, Lux Regulon
NW96_RS15855	SM00100	Cyclic nucleotide-monophosphate binding domain
NW96_RS15855	SM00419	helix_turn_helix, cAMP Regulatory protein
NW96_RS15860	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS15865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS15865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS15890	SM00382	ATPases associated with a variety of cellular activities
NW96_RS15965	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS16015	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS16020	SM00382	ATPases associated with a variety of cellular activities
NW96_RS16080	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS16140	SM00382	ATPases associated with a variety of cellular activities
NW96_RS16220	SM00278	Helix-hairpin-helix DNA-binding motif class 1
NW96_RS16220	SM00465	GIY-YIG type nucleases (URI domain)
NW96_RS16230	SM00841	Elongation factor P, C-terminal
NW96_RS16230	SM01185	NW96_RS16230
NW96_RS16235	SM00382	ATPases associated with a variety of cellular activities
NW96_RS16235	SM00448	cheY-homologous receiver domain
NW96_RS16265	SM00358	Double-stranded RNA binding motif
NW96_RS16265	SM00535	Ribonuclease III family
NW96_RS16275	SM00838	Elongation factor G C-terminus
NW96_RS16285	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW96_RS16310	SM00825	Beta-ketoacyl synthase
NW96_RS16320	SM00822	NW96_RS16320
NW96_RS16325	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NW96_RS16375	SM00363	S4 RNA-binding domain
NW96_RS16385	SM00316	Ribosomal protein S1-like RNA-binding domain
NW96_RS16390	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS16400	SM00852	Probable molybdopterin binding domain
NW96_RS16525	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NW96_RS16550	SM01329	NW96_RS16550
NW96_RS16605	SM00830	Chorismate mutase type II
NW96_RS16780	SM00028	Tetratricopeptide repeats
NW96_RS16805	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW96_RS16805	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
NW96_RS16810	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
NW96_RS16875	SM00434	DNA Topoisomerase IV
NW96_RS16890	SM00830	Chorismate mutase type II
NW96_RS16905	SM00316	Ribosomal protein S1-like RNA-binding domain
NW96_RS16910	SM00411	bacterial (prokaryotic) histone like domain
NW96_RS16925	SM00028	Tetratricopeptide repeats
NW96_RS16930	SM00984	UDP binding domain
NW96_RS16945	SM00278	Helix-hairpin-helix DNA-binding motif class 1
NW96_RS16980	SM00382	ATPases associated with a variety of cellular activities
NW96_RS16980	SM00930	NW96_RS16980
NW96_RS16995	SM00893	Electron transfer flavoprotein domain
NW96_RS17000	SM00893	Electron transfer flavoprotein domain
NW96_RS17015	SM00344	helix_turn_helix ASNC type
NW96_RS17020	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS17105	SM00479	NW96_RS17105
NW96_RS17110	SM00852	Probable molybdopterin binding domain
NW96_RS17140	SM00382	ATPases associated with a variety of cellular activities
NW96_RS17160	SM00382	ATPases associated with a variety of cellular activities
NW96_RS17225	SM01207	NW96_RS17225
NW96_RS17260	SM00646	NW96_RS17260
NW96_RS17325	SM00903	Flavin reductase like domain
NW96_RS17330	SM00344	helix_turn_helix ASNC type
NW96_RS17420	SM00382	ATPases associated with a variety of cellular activities
NW96_RS17455	SM00822	NW96_RS17455
NW96_RS17470	SM00382	ATPases associated with a variety of cellular activities
NW96_RS17485	SM00829	Enoylreductase
NW96_RS17490	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS17565	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW96_RS17575	SM00387	Histidine kinase-like ATPases
NW96_RS17575	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS17580	SM00448	cheY-homologous receiver domain
NW96_RS17580	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS17620	SM01001	AIR carboxylase
NW96_RS17720	SM00387	Histidine kinase-like ATPases
NW96_RS17720	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS17725	SM00448	cheY-homologous receiver domain
NW96_RS17725	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS17730	SM00382	ATPases associated with a variety of cellular activities
NW96_RS17750	SM00881	CoA binding domain
NW96_RS17805	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
NW96_RS17805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS17825	SM00448	cheY-homologous receiver domain
NW96_RS17830	SM00387	Histidine kinase-like ATPases
NW96_RS17850	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
NW96_RS17880	SM00487	DEAD-like helicases superfamily
NW96_RS17880	SM00490	helicase superfamily c-terminal domain
NW96_RS17900	SM00420	helix_turn_helix, Deoxyribose operon repressor
NW96_RS17900	SM01134	NW96_RS17900
NW96_RS17980	SM00530	Helix-turn-helix XRE-family like proteins 
NW96_RS18000	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS18030	SM01091	Transporter associated domain
NW96_RS18045	SM00836	DALR anticodon binding domain
NW96_RS18055	SM00563	Phosphate acyltransferases
NW96_RS18080	SM00650	Ribosomal RNA adenine dimethylases
NW96_RS18115	SM00382	ATPases associated with a variety of cellular activities
NW96_RS18165	SM00155	Phospholipase D. Active site motifs.
NW96_RS18185	SM00834	Putative regulatory protein
NW96_RS18205	SM00978	NW96_RS18205
NW96_RS18270	SM01119	NW96_RS18270
NW96_RS18280	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS18300	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
NW96_RS18325	SM00845	GatB domain
NW96_RS18370	SM00671	Sel1-like repeats.
NW96_RS18410	SM00448	cheY-homologous receiver domain
NW96_RS18415	SM00091	PAS domain
NW96_RS18415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS18415	SM00387	Histidine kinase-like ATPases
NW96_RS18415	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS18465	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
NW96_RS18465	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
NW96_RS18465	SM00493	NW96_RS18465
NW96_RS18590	SM00478	endonuclease III
NW96_RS18590	SM01009	AlkA N-terminal domain
NW96_RS18595	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS18610	SM01322	NW96_RS18610
NW96_RS18705	SM00478	endonuclease III
NW96_RS18705	SM01009	AlkA N-terminal domain
NW96_RS18710	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS18725	SM01322	NW96_RS18725
NW96_RS18820	SM00478	endonuclease III
NW96_RS18820	SM01009	AlkA N-terminal domain
NW96_RS18825	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS18840	SM01322	NW96_RS18840
NW96_RS18875	SM01234	NW96_RS18875
NW96_RS18925	SM00530	Helix-turn-helix XRE-family like proteins 
NW96_RS18935	SM00829	Enoylreductase
NW96_RS18945	SM00867	YceI-like domain 
NW96_RS18975	SM01329	NW96_RS18975
NW96_RS19035	SM00014	Acid phosphatase homologues
NW96_RS19095	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS19115	SM00100	Cyclic nucleotide-monophosphate binding domain
NW96_RS19115	SM00419	helix_turn_helix, cAMP Regulatory protein
NW96_RS19210	SM00882	Coenzyme A transferase
NW96_RS19215	SM00882	Coenzyme A transferase
NW96_RS19220	SM00998	Adenylosuccinate lyase C-terminus
NW96_RS19310	SM00382	ATPases associated with a variety of cellular activities
NW96_RS19345	SM00528	Domain in histone-like proteins of HNS family
NW96_RS19370	SM00387	Histidine kinase-like ATPases
NW96_RS19370	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS19375	SM00382	ATPases associated with a variety of cellular activities
NW96_RS19375	SM00448	cheY-homologous receiver domain
NW96_RS19415	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS19495	SM00944	Pro-kumamolisin, activation domain
NW96_RS19520	SM00267	diguanylate cyclase
NW96_RS19540	SM00822	NW96_RS19540
NW96_RS19595	SM01133	NW96_RS19595
NW96_RS19620	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
NW96_RS19635	SM00749	bacterial OsmY and nodulation domain
NW96_RS19680	SM00382	ATPases associated with a variety of cellular activities
NW96_RS19730	SM00829	Enoylreductase
NW96_RS19745	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS19745	SM01049	NW96_RS19745
NW96_RS19755	SM00387	Histidine kinase-like ATPases
NW96_RS19755	SM00448	cheY-homologous receiver domain
NW96_RS19765	SM00382	ATPases associated with a variety of cellular activities
NW96_RS19805	SM00382	ATPases associated with a variety of cellular activities
NW96_RS19830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS19855	SM00749	bacterial OsmY and nodulation domain
NW96_RS19895	SM00829	Enoylreductase
NW96_RS19905	SM00100	Cyclic nucleotide-monophosphate binding domain
NW96_RS19905	SM00419	helix_turn_helix, cAMP Regulatory protein
NW96_RS19915	SM00822	NW96_RS19915
NW96_RS19925	SM00849	Metallo-beta-lactamase superfamily
NW96_RS19925	SM01027	Beta-Casp domain
NW96_RS19950	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS20040	SM00829	Enoylreductase
NW96_RS20215	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS20260	SM00797	Allophanate hydrolase subunit 2
NW96_RS20265	SM00796	Allophanate hydrolase subunit 1
NW96_RS20270	SM00878	Biotin carboxylase C-terminal domain
NW96_RS20345	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS20345	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS20355	SM00091	PAS domain
NW96_RS20355	SM00382	ATPases associated with a variety of cellular activities
NW96_RS20405	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW96_RS20415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS20415	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS20415	SM00319	Homologues of the ligand binding domain of Tar
NW96_RS20595	SM00382	ATPases associated with a variety of cellular activities
NW96_RS20650	SM00382	ATPases associated with a variety of cellular activities
NW96_RS20685	SM00382	ATPases associated with a variety of cellular activities
NW96_RS20705	SM00829	Enoylreductase
NW96_RS20715	SM01120	NW96_RS20715
NW96_RS20860	SM00460	Transglutaminase/protease-like homologues
NW96_RS20865	SM00460	Transglutaminase/protease-like homologues
NW96_RS20880	SM00460	Transglutaminase/protease-like homologues
NW96_RS20885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS20905	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS20990	SM00937	NW96_RS20990
NW96_RS21030	SM00382	ATPases associated with a variety of cellular activities
NW96_RS21070	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS21120	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW96_RS21130	SM00986	Uracil DNA glycosylase superfamily
NW96_RS21130	SM00987	UreE urease accessory protein, C-terminal domain 
NW96_RS21135	SM01118	NW96_RS21135
NW96_RS21190	SM00925	MltA specific insert domain
NW96_RS21325	SM00226	Low molecular weight phosphatase family
NW96_RS21335	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NW96_RS21375	SM00382	ATPases associated with a variety of cellular activities
NW96_RS21385	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS21440	SM01007	Class II Aldolase and Adducin N-terminal domain
NW96_RS21455	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS21455	SM00895	NW96_RS21455
NW96_RS21530	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS21540	SM00052	Putative diguanylate phosphodiesterase
NW96_RS21590	SM00052	Putative diguanylate phosphodiesterase
NW96_RS21590	SM00267	diguanylate cyclase
NW96_RS21600	SM00344	helix_turn_helix ASNC type
NW96_RS21670	SM00091	PAS domain
NW96_RS21670	SM00387	Histidine kinase-like ATPases
NW96_RS21675	SM00448	cheY-homologous receiver domain
NW96_RS21690	SM01359	NW96_RS21690
NW96_RS21690	SM01360	NW96_RS21690
NW96_RS21790	SM00530	Helix-turn-helix XRE-family like proteins 
NW96_RS21820	SM00421	helix_turn_helix, Lux Regulon
NW96_RS21820	SM00448	cheY-homologous receiver domain
NW96_RS21910	SM00530	Helix-turn-helix XRE-family like proteins 
NW96_RS21915	SM00528	Domain in histone-like proteins of HNS family
NW96_RS22000	SM00382	ATPases associated with a variety of cellular activities
NW96_RS22025	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NW96_RS22120	SM00487	DEAD-like helicases superfamily
NW96_RS22120	SM00490	helicase superfamily c-terminal domain
NW96_RS22235	SM00421	helix_turn_helix, Lux Regulon
NW96_RS22260	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS22290	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NW96_RS22320	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW96_RS22350	SM00421	helix_turn_helix, Lux Regulon
NW96_RS22380	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS22425	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS22500	SM00344	helix_turn_helix ASNC type
NW96_RS22585	SM00822	NW96_RS22585
NW96_RS22605	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS22610	SM00422	helix_turn_helix, mercury resistance
NW96_RS22630	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS22630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS22735	SM00257	Lysin motif
NW96_RS22770	SM00382	ATPases associated with a variety of cellular activities
NW96_RS22775	SM00382	ATPases associated with a variety of cellular activities
NW96_RS22850	SM00869	Autotransporter beta-domain
NW96_RS22875	SM00835	Cupin
NW96_RS22905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS22920	SM00831	Cation transporter/ATPase, N-terminus
NW96_RS22985	SM00382	ATPases associated with a variety of cellular activities
NW96_RS23065	SM00448	cheY-homologous receiver domain
NW96_RS23070	SM00850	LytTr DNA-binding domain
NW96_RS23095	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS23110	SM00028	Tetratricopeptide repeats
NW96_RS23115	SM00825	Beta-ketoacyl synthase
NW96_RS23175	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NW96_RS23205	SM00825	Beta-ketoacyl synthase
NW96_RS23220	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW96_RS23225	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS23230	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW96_RS23280	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS23305	SM00867	YceI-like domain 
NW96_RS23350	SM00382	ATPases associated with a variety of cellular activities
NW96_RS23425	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS23425	SM00387	Histidine kinase-like ATPases
NW96_RS23425	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS23430	SM00448	cheY-homologous receiver domain
NW96_RS23430	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS23500	SM00382	ATPases associated with a variety of cellular activities
NW96_RS23550	SM00320	WD40 repeats
NW96_RS23650	SM00420	helix_turn_helix, Deoxyribose operon repressor
NW96_RS23650	SM01134	NW96_RS23650
NW96_RS23700	SM00829	Enoylreductase
NW96_RS23705	SM00382	ATPases associated with a variety of cellular activities
NW96_RS23710	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS23740	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW96_RS23775	SM00448	cheY-homologous receiver domain
NW96_RS23775	SM01012	NW96_RS23775
NW96_RS23855	SM00822	NW96_RS23855
NW96_RS23885	SM00829	Enoylreductase
NW96_RS23955	SM00823	Phosphopantetheine attachment site
NW96_RS23960	SM00923	MbtH-like protein
NW96_RS23970	SM00824	Thioesterase
NW96_RS24030	SM00267	diguanylate cyclase
NW96_RS24090	SM00382	ATPases associated with a variety of cellular activities
NW96_RS24160	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NW96_RS24195	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS24210	SM00344	helix_turn_helix ASNC type
NW96_RS24225	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS24225	SM00866	NW96_RS24225
NW96_RS24290	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NW96_RS24320	SM00530	Helix-turn-helix XRE-family like proteins 
NW96_RS24330	SM00450	Rhodanese Homology Domain
NW96_RS24450	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
NW96_RS24450	SM00091	PAS domain
NW96_RS24450	SM00387	Histidine kinase-like ATPases
NW96_RS24450	SM00448	cheY-homologous receiver domain
NW96_RS24455	SM00448	cheY-homologous receiver domain
NW96_RS24460	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
NW96_RS24460	SM00091	PAS domain
NW96_RS24460	SM00387	Histidine kinase-like ATPases
NW96_RS24460	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS24505	SM00357	Cold shock protein domain
NW96_RS24535	SM00905	Dihydroneopterin aldolase
NW96_RS24695	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS24790	SM00387	Histidine kinase-like ATPases
NW96_RS24790	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS24795	SM00448	cheY-homologous receiver domain
NW96_RS24795	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS24810	SM00382	ATPases associated with a variety of cellular activities
NW96_RS24820	SM00829	Enoylreductase
NW96_RS24825	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS24865	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS24880	SM00448	cheY-homologous receiver domain
NW96_RS24880	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS24885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS24885	SM00387	Histidine kinase-like ATPases
NW96_RS24885	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS24940	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS24950	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
NW96_RS24975	SM00421	helix_turn_helix, Lux Regulon
NW96_RS24990	SM00421	helix_turn_helix, Lux Regulon
NW96_RS25080	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
NW96_RS25130	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS25135	SM00450	Rhodanese Homology Domain
NW96_RS25160	SM00448	cheY-homologous receiver domain
NW96_RS25160	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS25165	SM00387	Histidine kinase-like ATPases
NW96_RS25165	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS25220	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NW96_RS25245	SM00387	Histidine kinase-like ATPases
NW96_RS25245	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS25250	SM00448	cheY-homologous receiver domain
NW96_RS25250	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS25305	SM00878	Biotin carboxylase C-terminal domain
NW96_RS25305	SM01209	NW96_RS25305
NW96_RS25380	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
NW96_RS25420	SM00387	Histidine kinase-like ATPases
NW96_RS25420	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS25425	SM00448	cheY-homologous receiver domain
NW96_RS25425	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS25465	SM01150	NW96_RS25465
NW96_RS25505	SM00155	Phospholipase D. Active site motifs.
NW96_RS25515	SM00420	helix_turn_helix, Deoxyribose operon repressor
NW96_RS25515	SM01134	NW96_RS25515
NW96_RS25540	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS25540	SM00895	NW96_RS25540
NW96_RS25545	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
NW96_RS25550	SM00829	Enoylreductase
NW96_RS25625	SM00644	NW96_RS25625
NW96_RS25650	SM00448	cheY-homologous receiver domain
NW96_RS25650	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS25655	SM00387	Histidine kinase-like ATPases
NW96_RS25695	SM00382	ATPases associated with a variety of cellular activities
NW96_RS25695	SM01086	C-terminal, D2-small domain, of ClpB protein
NW96_RS25800	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS25830	SM01130	NW96_RS25830
NW96_RS25905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS25905	SM00895	NW96_RS25905
NW96_RS25940	SM00382	ATPases associated with a variety of cellular activities
NW96_RS25940	SM00930	NW96_RS25940
NW96_RS25960	SM00421	helix_turn_helix, Lux Regulon
NW96_RS25985	SM00508	Cysteine-rich motif following a subset of SET domains
NW96_RS26015	SM00822	NW96_RS26015
NW96_RS26015	SM00823	Phosphopantetheine attachment site
NW96_RS26015	SM00825	Beta-ketoacyl synthase
NW96_RS26015	SM00826	NW96_RS26015
NW96_RS26015	SM01294	NW96_RS26015
NW96_RS26020	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
NW96_RS26045	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NW96_RS26075	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS26075	SM00895	NW96_RS26075
NW96_RS26175	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS26185	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS26235	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS26260	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS26295	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS26395	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS26410	SM00421	helix_turn_helix, Lux Regulon
NW96_RS26410	SM00448	cheY-homologous receiver domain
NW96_RS26460	SM00528	Domain in histone-like proteins of HNS family
NW96_RS26515	SM00382	ATPases associated with a variety of cellular activities
NW96_RS26540	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS26590	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS26625	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS26665	SM00944	Pro-kumamolisin, activation domain
NW96_RS26675	SM00344	helix_turn_helix ASNC type
NW96_RS26730	SM00421	helix_turn_helix, Lux Regulon
NW96_RS26760	SM00382	ATPases associated with a variety of cellular activities
NW96_RS26805	SM00028	Tetratricopeptide repeats
NW96_RS26825	SM00530	Helix-turn-helix XRE-family like proteins 
NW96_RS26955	SM00382	ATPases associated with a variety of cellular activities
NW96_RS26965	SM00448	cheY-homologous receiver domain
NW96_RS26965	SM00862	Transcriptional regulatory protein, C terminal
NW96_RS26970	SM00387	Histidine kinase-like ATPases
NW96_RS27005	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS27095	SM00382	ATPases associated with a variety of cellular activities
NW96_RS27130	SM00824	Thioesterase
NW96_RS27220	SM00387	Histidine kinase-like ATPases
NW96_RS27220	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS27225	SM00897	FIST N domain
NW96_RS27225	SM01204	NW96_RS27225
NW96_RS27230	SM00448	cheY-homologous receiver domain
NW96_RS27245	SM00458	Ricin-type beta-trefoil
NW96_RS27305	SM01217	NW96_RS27305
NW96_RS27380	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS27390	SM00382	ATPases associated with a variety of cellular activities
NW96_RS27410	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS27460	SM00411	bacterial (prokaryotic) histone like domain
NW96_RS27615	SM00859	Semialdehyde dehydrogenase, NAD binding domain
NW96_RS27625	SM01329	NW96_RS27625
NW96_RS27675	SM00344	helix_turn_helix ASNC type
NW96_RS27715	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS27755	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS27755	SM00866	NW96_RS27755
NW96_RS27785	SM00912	haemagglutination activity domain
NW96_RS27825	SM00382	ATPases associated with a variety of cellular activities
NW96_RS27830	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW96_RS27865	SM00257	Lysin motif
NW96_RS27880	SM01350	NW96_RS27880
NW96_RS27940	SM00382	ATPases associated with a variety of cellular activities
NW96_RS27940	SM01086	C-terminal, D2-small domain, of ClpB protein
NW96_RS27980	SM00219	Tyrosine kinase, catalytic domain
NW96_RS28095	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NW96_RS28095	SM00450	Rhodanese Homology Domain
NW96_RS28100	SM00849	Metallo-beta-lactamase superfamily
NW96_RS28160	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS28175	SM00881	CoA binding domain
NW96_RS28190	SM00528	Domain in histone-like proteins of HNS family
NW96_RS28205	SM00382	ATPases associated with a variety of cellular activities
NW96_RS28230	SM00450	Rhodanese Homology Domain
NW96_RS28245	SM00382	ATPases associated with a variety of cellular activities
NW96_RS28250	SM00382	ATPases associated with a variety of cellular activities
NW96_RS28270	SM00530	Helix-turn-helix XRE-family like proteins 
NW96_RS28340	SM00400	zinc finger
NW96_RS28340	SM00493	NW96_RS28340
NW96_RS28340	SM00766	DNA primase DnaG DnaB-binding
NW96_RS28375	SM00861	Transketolase, pyrimidine binding domain
NW96_RS28400	SM00450	Rhodanese Homology Domain
NW96_RS28430	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
NW96_RS28430	SM00474	3'-5' exonuclease
NW96_RS28430	SM00475	5'-3' exonuclease
NW96_RS28430	SM00482	DNA polymerase A domain
NW96_RS28530	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS28550	SM00014	Acid phosphatase homologues
NW96_RS28565	SM00382	ATPases associated with a variety of cellular activities
NW96_RS28585	SM00880	NW96_RS28585
NW96_RS28605	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS28610	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW96_RS28610	SM01091	Transporter associated domain
NW96_RS28660	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS28725	SM00644	NW96_RS28725
NW96_RS28825	SM00829	Enoylreductase
NW96_RS28835	SM00822	NW96_RS28835
NW96_RS28850	SM00855	Phosphoglycerate mutase family
NW96_RS28910	SM00382	ATPases associated with a variety of cellular activities
NW96_RS28920	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS28970	SM00448	cheY-homologous receiver domain
NW96_RS28975	SM00073	Histidine Phosphotransfer domain
NW96_RS28975	SM00260	Two component signalling adaptor domain
NW96_RS28975	SM00387	Histidine kinase-like ATPases
NW96_RS28975	SM00448	cheY-homologous receiver domain
NW96_RS28980	SM00260	Two component signalling adaptor domain
NW96_RS28985	SM00028	Tetratricopeptide repeats
NW96_RS28985	SM00138	Methyltransferase, chemotaxis proteins 
NW96_RS28990	SM00260	Two component signalling adaptor domain
NW96_RS28995	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW96_RS28995	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW96_RS29000	SM00387	Histidine kinase-like ATPases
NW96_RS29000	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS29000	SM00448	cheY-homologous receiver domain
NW96_RS29045	SM00155	Phospholipase D. Active site motifs.
NW96_RS29075	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS29085	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
NW96_RS29130	SM00342	helix_turn_helix, arabinose operon control protein
NW96_RS29180	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW96_RS29245	SM00346	helix_turn_helix isocitrate lyase regulation
NW96_RS29395	SM00822	NW96_RS29395
NW96_RS29415	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
NW96_RS29415	SM00091	PAS domain
NW96_RS29415	SM00387	Histidine kinase-like ATPases
NW96_RS29415	SM00388	His Kinase A (phosphoacceptor) domain
NW96_RS29415	SM00448	cheY-homologous receiver domain
NW96_RS29430	SM00382	ATPases associated with a variety of cellular activities
NW96_RS29430	SM00448	cheY-homologous receiver domain
NW96_RS29445	SM00382	ATPases associated with a variety of cellular activities
NW96_RS29490	SM00382	ATPases associated with a variety of cellular activities
NW96_RS29490	SM00448	cheY-homologous receiver domain
NW96_RS29560	SM00903	Flavin reductase like domain
NW96_RS29590	SM00861	Transketolase, pyrimidine binding domain
NW96_RS29710	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW96_RS29750	SM00421	helix_turn_helix, Lux Regulon
NW96_RS29760	SM00829	Enoylreductase
NW96_RS29785	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW96_RS29930	SM00387	Histidine kinase-like ATPases
NW96_RS29930	SM01049	NW96_RS29930
NW96_RS29935	SM00421	helix_turn_helix, Lux Regulon
NW96_RS29935	SM00448	cheY-homologous receiver domain
NW96_RS29975	SM00052	Putative diguanylate phosphodiesterase
NW96_RS29975	SM00267	diguanylate cyclase
NW96_RS30020	SM00382	ATPases associated with a variety of cellular activities
NW96_RS30030	SM00822	NW96_RS30030
NW96_RS30035	SM00822	NW96_RS30035
NW96_RS30035	SM00825	Beta-ketoacyl synthase
NW96_RS30040	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NW96_RS30070	SM00382	ATPases associated with a variety of cellular activities
NW96_RS30080	SM00062	Bacterial periplasmic substrate-binding proteins
NW96_RS30080	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
NW96_RS30120	SM00091	PAS domain
NW96_RS30120	SM00267	diguanylate cyclase
NW96_RS30130	SM00448	cheY-homologous receiver domain
NW96_RS30140	SM00387	Histidine kinase-like ATPases
NW96_RS30140	SM00448	cheY-homologous receiver domain
NW96_RS30170	SM00470	ParB-like nuclease domain
