locus-tag class description NW98_RS00005 PF00308 Bacterial dnaA protein NW98_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix NW98_RS00005 PF11638 DnaA N-terminal domain NW98_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain NW98_RS00010 PF02767 DNA polymerase III beta subunit, central domain NW98_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain NW98_RS00020 PF00204 DNA gyrase B NW98_RS00020 PF18053 DNA gyrase B subunit insert domain NW98_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS00020 PF01751 Toprim domain NW98_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus NW98_RS00030 PF02627 Carboxymuconolactone decarboxylase family NW98_RS00095 PF00069 Protein kinase domain NW98_RS00115 PF00596 Class II Aldolase and Adducin N-terminal domain NW98_RS00130 PF00990 Diguanylate cyclase, GGDEF domain NW98_RS00130 PF00563 EAL domain NW98_RS00130 PF08448 PAS fold NW98_RS00145 PF00483 Nucleotidyl transferase NW98_RS00145 PF01050 Mannose-6-phosphate isomerase NW98_RS00160 PF00534 Glycosyl transferases group 1 NW98_RS00160 PF13439 Glycosyltransferase Family 4 NW98_RS00175 PF02954 Bacterial regulatory protein, Fis family NW98_RS00175 PF00158 Sigma-54 interaction domain NW98_RS00175 PF00072 Response regulator receiver domain NW98_RS00205 PF00550 Phosphopantetheine attachment site NW98_RS00225 PF02397 Bacterial sugar transferase NW98_RS00230 PF02563 Polysaccharide biosynthesis/export protein NW98_RS00230 PF10531 SLBB domain NW98_RS00230 PF18412 Outer-membrane lipoprotein Wza C-terminal domain NW98_RS00235 PF13439 Glycosyltransferase Family 4 NW98_RS00235 PF00534 Glycosyl transferases group 1 NW98_RS00255 PF00572 Ribosomal protein L13 NW98_RS00260 PF00380 Ribosomal protein S9/S16 NW98_RS00265 PF01521 Iron-sulphur cluster biosynthesis NW98_RS00270 PF12833 Helix-turn-helix domain NW98_RS00270 PF02311 AraC-like ligand binding domain NW98_RS00275 PF02798 Glutathione S-transferase, N-terminal domain NW98_RS00280 PF00043 Glutathione S-transferase, C-terminal domain NW98_RS00280 PF02798 Glutathione S-transferase, N-terminal domain NW98_RS00285 PF03702 Anhydro-N-acetylmuramic acid kinase NW98_RS00295 PF00579 tRNA synthetases class I (W and Y) NW98_RS00295 PF01479 S4 domain NW98_RS00300 PF02580 D-Tyr-tRNA(Tyr) deacylase NW98_RS00305 PF00300 Histidine phosphatase superfamily (branch 1) NW98_RS00320 PF17864 RuvB AAA lid domain NW98_RS00320 PF05491 RuvB C-terminal winged helix domain NW98_RS00320 PF05496 Holliday junction DNA helicase RuvB P-loop domain NW98_RS00325 PF07499 RuvA, C-terminal domain NW98_RS00325 PF01330 RuvA N terminal domain NW98_RS00330 PF02075 Crossover junction endodeoxyribonuclease RuvC NW98_RS00340 PF02142 MGS-like domain NW98_RS00340 PF01808 AICARFT/IMPCHase bienzyme NW98_RS00345 PF02954 Bacterial regulatory protein, Fis family NW98_RS00350 PF01207 Dihydrouridine synthase (Dus) NW98_RS00355 PF01494 FAD binding domain NW98_RS00360 PF05195 Aminopeptidase P, N-terminal domain NW98_RS00360 PF00557 Metallopeptidase family M24 NW98_RS00370 PF00043 Glutathione S-transferase, C-terminal domain NW98_RS00370 PF13417 Glutathione S-transferase, N-terminal domain NW98_RS00380 PF01645 Conserved region in glutamate synthase NW98_RS00390 PF00293 NUDIX domain NW98_RS00395 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NW98_RS00395 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NW98_RS00400 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NW98_RS00405 PF02233 NAD(P) transhydrogenase beta subunit NW98_RS00445 PF02926 THUMP domain NW98_RS00445 PF01170 Putative RNA methylase family UPF0020 NW98_RS00465 PF02470 MlaD protein NW98_RS00470 PF04403 Paraquat-inducible protein A NW98_RS00490 PF04264 YceI-like domain NW98_RS00495 PF04264 YceI-like domain NW98_RS00505 PF07690 Major Facilitator Superfamily NW98_RS00510 PF02355 Protein export membrane protein NW98_RS00510 PF07549 SecD/SecF GG Motif NW98_RS00515 PF07549 SecD/SecF GG Motif NW98_RS00515 PF13721 SecD export protein N-terminal TM region NW98_RS00515 PF02355 Protein export membrane protein NW98_RS00520 PF02699 Preprotein translocase subunit NW98_RS00525 PF01702 Queuine tRNA-ribosyltransferase NW98_RS00535 PF02547 Queuosine biosynthesis protein NW98_RS00540 PF00270 DEAD/DEAH box helicase NW98_RS00540 PF00271 Helicase conserved C-terminal domain NW98_RS00540 PF17191 RecG wedge domain NW98_RS00545 PF03466 LysR substrate binding domain NW98_RS00545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS00550 PF00141 Peroxidase NW98_RS00565 PF00210 Ferritin-like domain NW98_RS00575 PF01638 HxlR-like helix-turn-helix NW98_RS00580 PF01040 UbiA prenyltransferase family NW98_RS00590 PF06299 Protein of unknown function (DUF1045) NW98_RS00595 PF07702 UTRA domain NW98_RS00595 PF00392 Bacterial regulatory proteins, gntR family NW98_RS00605 PF06754 Phosphonate metabolism protein PhnG NW98_RS00615 PF05861 Bacterial phosphonate metabolism protein (PhnI) NW98_RS00620 PF06007 Phosphonate metabolism protein PhnJ NW98_RS00625 PF00005 ABC transporter NW98_RS00630 PF00005 ABC transporter NW98_RS00635 PF07969 Amidohydrolase family NW98_RS00640 PF00005 ABC transporter NW98_RS00650 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS00665 PF14748 Pyrroline-5-carboxylate reductase dimerisation NW98_RS00665 PF03807 NADP oxidoreductase coenzyme F420-dependent NW98_RS00670 PF01168 Alanine racemase, N-terminal domain NW98_RS00675 PF02754 Cysteine-rich domain NW98_RS00675 PF13183 4Fe-4S dicluster domain NW98_RS00680 PF01565 FAD binding domain NW98_RS00685 PF01565 FAD binding domain NW98_RS00685 PF02913 FAD linked oxidases, C-terminal domain NW98_RS00690 PF01565 FAD binding domain NW98_RS00690 PF02913 FAD linked oxidases, C-terminal domain NW98_RS00695 PF01923 Cobalamin adenosyltransferase NW98_RS00700 PF00042 Globin NW98_RS00700 PF00175 Oxidoreductase NAD-binding domain NW98_RS00700 PF00970 Oxidoreductase FAD-binding domain NW98_RS00725 PF01979 Amidohydrolase family NW98_RS00735 PF13230 Glutamine amidotransferases class-II NW98_RS00755 PF00011 Hsp20/alpha crystallin family NW98_RS00760 PF00011 Hsp20/alpha crystallin family NW98_RS00770 PF00166 Chaperonin 10 Kd subunit NW98_RS00785 PF00005 ABC transporter NW98_RS00790 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS00795 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS00800 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS00805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NW98_RS00805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NW98_RS00815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS00815 PF03466 LysR substrate binding domain NW98_RS00820 PF07690 Major Facilitator Superfamily NW98_RS00825 PF08328 Adenylosuccinate lyase C-terminal NW98_RS00825 PF00206 Lyase NW98_RS00835 PF02447 GntP family permease NW98_RS00845 PF01081 KDPG and KHG aldolase NW98_RS00850 PF00920 Dehydratase family NW98_RS00860 PF01418 Helix-turn-helix domain, rpiR family NW98_RS00860 PF01380 SIS domain NW98_RS00870 PF03653 Uncharacterised protein family (UPF0093) NW98_RS00875 PF00171 Aldehyde dehydrogenase family NW98_RS00880 PF14840 Processivity clamp loader gamma complex DNA pol III C-term NW98_RS00880 PF06144 DNA polymerase III, delta subunit NW98_RS00890 PF00133 tRNA synthetases class I (I, L, M and V) NW98_RS00890 PF08264 Anticodon-binding domain of tRNA NW98_RS00890 PF13603 Leucyl-tRNA synthetase, Domain 2 NW98_RS00890 PF09334 tRNA synthetases class I (M) NW98_RS00895 PF02472 Biopolymer transport protein ExbD/TolR NW98_RS00900 PF01618 MotA/TolQ/ExbB proton channel family NW98_RS00905 PF01113 Dihydrodipicolinate reductase, N-terminus NW98_RS00905 PF05173 Dihydrodipicolinate reductase, C-terminus NW98_RS00910 PF04355 SmpA / OmlA family NW98_RS00915 PF01475 Ferric uptake regulator family NW98_RS00925 PF03561 Allantoicase repeat NW98_RS00940 PF00436 Single-strand binding protein family NW98_RS00945 PF07690 Major Facilitator Superfamily NW98_RS00950 PF17755 UvrA DNA-binding domain NW98_RS00950 PF17760 UvrA interaction domain NW98_RS00970 PF00551 Formyl transferase NW98_RS00980 PF01810 LysE type translocator NW98_RS00995 PF00999 Sodium/hydrogen exchanger family NW98_RS00995 PF02254 TrkA-N domain NW98_RS00995 PF02080 TrkA-C domain NW98_RS01000 PF01380 SIS domain NW98_RS01000 PF00571 CBS domain NW98_RS01020 PF00005 ABC transporter NW98_RS01020 PF12399 Branched-chain amino acid ATP-binding cassette transporter NW98_RS01025 PF00309 Sigma-54 factor, Activator interacting domain (AID) NW98_RS01025 PF04552 Sigma-54, DNA binding domain NW98_RS01025 PF04963 Sigma-54 factor, core binding domain NW98_RS01035 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NW98_RS01040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NW98_RS01045 PF07475 HPr Serine kinase C-terminal domain NW98_RS01045 PF02603 HPr Serine kinase N terminus NW98_RS01050 PF03668 P-loop ATPase protein family NW98_RS01060 PF10576 Iron-sulfur binding domain of endonuclease III NW98_RS01060 PF00633 Helix-hairpin-helix motif NW98_RS01060 PF00730 HhH-GPD superfamily base excision DNA repair protein NW98_RS01060 PF14815 NUDIX domain NW98_RS01065 PF06827 Zinc finger found in FPG and IleRS NW98_RS01065 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NW98_RS01065 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NW98_RS01075 PF03550 Outer membrane lipoprotein LolB NW98_RS01080 PF08544 GHMP kinases C terminal NW98_RS01080 PF00288 GHMP kinases N terminal domain NW98_RS01090 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NW98_RS01090 PF14572 Phosphoribosyl synthetase-associated domain NW98_RS01095 PF01386 Ribosomal L25p family NW98_RS01095 PF14693 Ribosomal protein TL5, C-terminal domain NW98_RS01100 PF01195 Peptidyl-tRNA hydrolase NW98_RS01105 PF00155 Aminotransferase class I and II NW98_RS01110 PF00037 4Fe-4S binding domain NW98_RS01115 PF01467 Cytidylyltransferase-like NW98_RS01130 PF00448 SRP54-type protein, GTPase domain NW98_RS01130 PF02881 SRP54-type protein, helical bundle domain NW98_RS01135 PF02798 Glutathione S-transferase, N-terminal domain NW98_RS01135 PF14497 Glutathione S-transferase, C-terminal domain NW98_RS01145 PF18267 Rubredoxin NAD+ reductase C-terminal domain NW98_RS01145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NW98_RS01145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NW98_RS01145 PF04324 BFD-like [2Fe-2S] binding domain NW98_RS01145 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS01150 PF00355 Rieske [2Fe-2S] domain NW98_RS01155 PF01568 Molydopterin dinucleotide binding domain NW98_RS01155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NW98_RS01155 PF00384 Molybdopterin oxidoreductase NW98_RS01160 PF02885 Glycosyl transferase family, helical bundle domain NW98_RS01175 PF08502 LeuA allosteric (dimerisation) domain NW98_RS01175 PF00682 HMGL-like NW98_RS01185 PF09411 Lipid A 3-O-deacylase (PagL) NW98_RS01195 PF00140 Sigma-70 factor, region 1.2 NW98_RS01195 PF04545 Sigma-70, region 4 NW98_RS01195 PF04542 Sigma-70 region 2 NW98_RS01220 PF00005 ABC transporter NW98_RS01225 PF03846 Cell division inhibitor SulA NW98_RS01235 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NW98_RS01235 PF07733 Bacterial DNA polymerase III alpha NTPase domain NW98_RS01235 PF02811 PHP domain NW98_RS01235 PF14579 Helix-hairpin-helix motif NW98_RS01245 PF07690 Major Facilitator Superfamily NW98_RS01255 PF00202 Aminotransferase class-III NW98_RS01270 PF00005 ABC transporter NW98_RS01270 PF12857 TOBE-like domain NW98_RS01280 PF13649 Methyltransferase domain NW98_RS01290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS01290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS01290 PF12806 Acetyl-CoA dehydrogenase C-terminal like NW98_RS01290 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS01300 PF00550 Phosphopantetheine attachment site NW98_RS01300 PF13193 AMP-binding enzyme C-terminal domain NW98_RS01300 PF00501 AMP-binding enzyme NW98_RS01300 PF00668 Condensation domain NW98_RS01340 PF00501 AMP-binding enzyme NW98_RS01345 PF03466 LysR substrate binding domain NW98_RS01345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS01355 PF07702 UTRA domain NW98_RS01355 PF00392 Bacterial regulatory proteins, gntR family NW98_RS01360 PF01979 Amidohydrolase family NW98_RS01365 PF01380 SIS domain NW98_RS01370 PF00381 PTS HPr component phosphorylation site NW98_RS01370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NW98_RS01370 PF02896 PEP-utilising enzyme, TIM barrel domain NW98_RS01370 PF00391 PEP-utilising enzyme, mobile domain NW98_RS01370 PF05524 PEP-utilising enzyme, N-terminal NW98_RS01375 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 NW98_RS01375 PF02378 Phosphotransferase system, EIIC NW98_RS01375 PF00367 phosphotransferase system, EIIB NW98_RS01380 PF03173 Putative carbohydrate binding domain NW98_RS01380 PF02838 Glycosyl hydrolase family 20, domain 2 NW98_RS01380 PF00728 Glycosyl hydrolase family 20, catalytic domain NW98_RS01380 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain NW98_RS01395 PF08173 Membrane bound YbgT-like protein NW98_RS01400 PF02322 Cytochrome bd terminal oxidase subunit II NW98_RS01405 PF01654 Cytochrome bd terminal oxidase subunit I NW98_RS01420 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS01420 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS01420 PF01610 Transposase NW98_RS01430 PF13520 Amino acid permease NW98_RS01450 PF05552 Conserved TM helix NW98_RS01465 PF00403 Heavy-metal-associated domain NW98_RS01470 PF13411 MerR HTH family regulatory protein NW98_RS01480 PF01565 FAD binding domain NW98_RS01480 PF02913 FAD linked oxidases, C-terminal domain NW98_RS01495 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS01500 PF00155 Aminotransferase class I and II NW98_RS01520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS01520 PF18158 Adaptive response protein AidB N-terminal domain NW98_RS01520 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS01525 PF00501 AMP-binding enzyme NW98_RS01525 PF13193 AMP-binding enzyme C-terminal domain NW98_RS01530 PF13458 Periplasmic binding protein NW98_RS01535 PF14850 DNA-binding domain of Proline dehydrogenase NW98_RS01535 PF01619 Proline dehydrogenase NW98_RS01535 PF00171 Aldehyde dehydrogenase family NW98_RS01535 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NW98_RS01555 PF00271 Helicase conserved C-terminal domain NW98_RS01555 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NW98_RS01555 PF18074 Primosomal protein N C-terminal domain NW98_RS01555 PF17764 3′ DNA-binding domain (3′BD) NW98_RS01555 PF00270 DEAD/DEAH box helicase NW98_RS01565 PF01208 Uroporphyrinogen decarboxylase (URO-D) NW98_RS01570 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS01575 PF13380 CoA binding domain NW98_RS01595 PF13193 AMP-binding enzyme C-terminal domain NW98_RS01595 PF00501 AMP-binding enzyme NW98_RS01600 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NW98_RS01600 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain NW98_RS01605 PF02874 ATP synthase alpha/beta family, beta-barrel domain NW98_RS01605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW98_RS01610 PF00231 ATP synthase NW98_RS01615 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW98_RS01615 PF00306 ATP synthase alpha/beta chain, C terminal domain NW98_RS01615 PF02874 ATP synthase alpha/beta family, beta-barrel domain NW98_RS01620 PF00213 ATP synthase delta (OSCP) subunit NW98_RS01625 PF00430 ATP synthase B/B' CF(0) NW98_RS01630 PF00137 ATP synthase subunit C NW98_RS01635 PF00119 ATP synthase A chain NW98_RS01650 PF03600 Citrate transporter NW98_RS01655 PF17762 HTH domain found in ParB protein NW98_RS01655 PF02195 ParB-like nuclease domain NW98_RS01660 PF13614 AAA domain NW98_RS01665 PF02527 rRNA small subunit methyltransferase G NW98_RS01670 PF13932 GidA associated domain NW98_RS01670 PF01134 Glucose inhibited division protein A NW98_RS01675 PF00005 ABC transporter NW98_RS01680 PF12399 Branched-chain amino acid ATP-binding cassette transporter NW98_RS01680 PF00005 ABC transporter NW98_RS01705 PF02653 Branched-chain amino acid transport system / permease component NW98_RS01715 PF00005 ABC transporter NW98_RS01720 PF12399 Branched-chain amino acid ATP-binding cassette transporter NW98_RS01720 PF00005 ABC transporter NW98_RS01735 PF05199 GMC oxidoreductase NW98_RS01735 PF00732 GMC oxidoreductase NW98_RS01740 PF00171 Aldehyde dehydrogenase family NW98_RS01745 PF03466 LysR substrate binding domain NW98_RS01745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS01760 PF01037 Lrp/AsnC ligand binding domain NW98_RS01765 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NW98_RS01770 PF01329 Pterin 4 alpha carbinolamine dehydratase NW98_RS01780 PF00072 Response regulator receiver domain NW98_RS01780 PF00486 Transcriptional regulatory protein, C terminal NW98_RS01785 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS01785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS01785 PF08521 Two-component sensor kinase N-terminal NW98_RS01805 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NW98_RS01810 PF00958 GMP synthase C terminal domain NW98_RS01810 PF02540 NAD synthase NW98_RS01810 PF00117 Glutamine amidotransferase class-I NW98_RS01825 PF04107 Glutamate-cysteine ligase family 2(GCS2) NW98_RS01845 PF01266 FAD dependent oxidoreductase NW98_RS01845 PF05430 S-adenosyl-L-methionine-dependent methyltransferase NW98_RS01850 PF00216 Bacterial DNA-binding protein NW98_RS01860 PF05036 Sporulation related domain NW98_RS01860 PF03330 Lytic transglycolase NW98_RS01870 PF00753 Metallo-beta-lactamase superfamily NW98_RS01880 PF01037 Lrp/AsnC ligand binding domain NW98_RS01885 PF01545 Cation efflux family NW98_RS01885 PF16916 Dimerisation domain of Zinc Transporter NW98_RS01905 PF07690 Major Facilitator Superfamily NW98_RS01910 PF13458 Periplasmic binding protein NW98_RS01935 PF18416 N-acetylglucosamine binding protein domain 2 NW98_RS01935 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading NW98_RS01945 PF08031 Berberine and berberine like NW98_RS01945 PF01565 FAD binding domain NW98_RS01955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS01955 PF02203 Tar ligand binding domain homologue NW98_RS01955 PF00672 HAMP domain NW98_RS01960 PF00561 alpha/beta hydrolase fold NW98_RS01975 PF03783 Curli production assembly/transport component CsgG NW98_RS01985 PF05643 Putative bacterial lipoprotein (DUF799) NW98_RS01995 PF04185 Phosphoesterase family NW98_RS02005 PF01810 LysE type translocator NW98_RS02040 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NW98_RS02040 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NW98_RS02050 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NW98_RS02050 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NW98_RS02055 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NW98_RS02075 PF00669 Bacterial flagellin N-terminal helical region NW98_RS02075 PF00700 Bacterial flagellin C-terminal helical region NW98_RS02085 PF01165 Ribosomal protein S21 NW98_RS02095 PF03352 Methyladenine glycosylase NW98_RS02095 PF00117 Glutamine amidotransferase class-I NW98_RS02095 PF13673 Acetyltransferase (GNAT) domain NW98_RS02095 PF13302 Acetyltransferase (GNAT) domain NW98_RS02095 PF00958 GMP synthase C terminal domain NW98_RS02110 PF00230 Major intrinsic protein NW98_RS02130 PF13439 Glycosyltransferase Family 4 NW98_RS02140 PF05247 Flagellar transcriptional activator (FlhD) NW98_RS02145 PF05280 Flagellar transcriptional activator (FlhC) NW98_RS02150 PF01618 MotA/TolQ/ExbB proton channel family NW98_RS02160 PF01339 CheB methylesterase NW98_RS02160 PF00072 Response regulator receiver domain NW98_RS02165 PF01627 Hpt domain NW98_RS02165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS02165 PF02895 Signal transducing histidine kinase, homodimeric domain NW98_RS02165 PF09078 CheY binding NW98_RS02165 PF01584 CheW-like domain NW98_RS02170 PF01584 CheW-like domain NW98_RS02175 PF02203 Tar ligand binding domain homologue NW98_RS02175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS02175 PF00672 HAMP domain NW98_RS02180 PF01739 CheR methyltransferase, SAM binding domain NW98_RS02180 PF03705 CheR methyltransferase, all-alpha domain NW98_RS02185 PF03975 CheD chemotactic sensory transduction NW98_RS02190 PF00072 Response regulator receiver domain NW98_RS02190 PF01339 CheB methylesterase NW98_RS02200 PF00072 Response regulator receiver domain NW98_RS02205 PF04344 Chemotaxis phosphatase, CheZ NW98_RS02225 PF01312 FlhB HrpN YscU SpaS Family NW98_RS02230 PF00771 FHIPEP family NW98_RS02240 PF00448 SRP54-type protein, GTPase domain NW98_RS02250 PF04545 Sigma-70, region 4 NW98_RS02250 PF04539 Sigma-70 region 3 NW98_RS02250 PF04542 Sigma-70 region 2 NW98_RS02255 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NW98_RS02255 PF05221 S-adenosyl-L-homocysteine hydrolase NW98_RS02260 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV NW98_RS02265 PF02219 Methylenetetrahydrofolate reductase NW98_RS02270 PF01425 Amidase NW98_RS02275 PF01738 Dienelactone hydrolase family NW98_RS02300 PF05947 Type VI secretion system, TssF NW98_RS02310 PF10431 C-terminal, D2-small domain, of ClpB protein NW98_RS02310 PF17871 AAA lid domain NW98_RS02310 PF07724 AAA domain (Cdc48 subfamily) NW98_RS02310 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS02320 PF00691 OmpA family NW98_RS02330 PF06744 Type VI secretion protein IcmF C-terminal NW98_RS02330 PF14331 ImcF-related N-terminal domain NW98_RS02330 PF06761 Intracellular multiplication and human macrophage-killing NW98_RS02355 PF00005 ABC transporter NW98_RS02355 PF03412 Peptidase C39 family NW98_RS02355 PF00664 ABC transporter transmembrane region NW98_RS02360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS02360 PF00529 HlyD membrane-fusion protein of T1SS NW98_RS02395 PF11838 ERAP1-like C-terminal domain NW98_RS02395 PF01433 Peptidase family M1 domain NW98_RS02475 PF00012 Hsp70 protein NW98_RS02490 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NW98_RS02495 PF02021 Uncharacterised protein family UPF0102 NW98_RS02500 PF13580 SIS domain NW98_RS02505 PF04972 BON domain NW98_RS02510 PF00034 Cytochrome c NW98_RS02520 PF00324 Amino acid permease NW98_RS02540 PF00313 'Cold-shock' DNA-binding domain NW98_RS02550 PF00905 Penicillin binding protein transpeptidase domain NW98_RS02550 PF17092 Penicillin-binding protein OB-like domain NW98_RS02550 PF00912 Transglycosylase NW98_RS02570 PF07660 Secretin and TonB N terminus short domain NW98_RS02570 PF03958 Bacterial type II/III secretion system short domain NW98_RS02570 PF00263 Bacterial type II and III secretion system protein NW98_RS02570 PF11741 AMIN domain NW98_RS02575 PF01202 Shikimate kinase NW98_RS02580 PF01761 3-dehydroquinate synthase NW98_RS02585 PF01966 HD domain NW98_RS02585 PF13286 Phosphohydrolase-associated domain NW98_RS02590 PF13416 Bacterial extracellular solute-binding protein NW98_RS02595 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS02600 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS02605 PF17912 MalK OB fold domain NW98_RS02605 PF00005 ABC transporter NW98_RS02610 PF03009 Glycerophosphoryl diester phosphodiesterase family NW98_RS02625 PF00310 Glutamine amidotransferases class-II NW98_RS02625 PF01645 Conserved region in glutamate synthase NW98_RS02625 PF01493 GXGXG motif NW98_RS02625 PF04898 Glutamate synthase central domain NW98_RS02630 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS02630 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NW98_RS02640 PF01235 Sodium:alanine symporter family NW98_RS02650 PF00005 ABC transporter NW98_RS02650 PF06472 ABC transporter transmembrane region 2 NW98_RS02655 PF01266 FAD dependent oxidoreductase NW98_RS02665 PF05690 Thiazole biosynthesis protein ThiG NW98_RS02670 PF02581 Thiamine monophosphate synthase NW98_RS02675 PF00005 ABC transporter NW98_RS02680 PF02405 Permease MlaE NW98_RS02685 PF02470 MlaD protein NW98_RS02710 PF00005 ABC transporter NW98_RS02715 PF01061 ABC-2 type transporter NW98_RS02725 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NW98_RS02730 PF01634 ATP phosphoribosyltransferase NW98_RS02735 PF00815 Histidinol dehydrogenase NW98_RS02740 PF00155 Aminotransferase class I and II NW98_RS02745 PF00475 Imidazoleglycerol-phosphate dehydratase NW98_RS02750 PF01914 MarC family integral membrane protein NW98_RS02755 PF00117 Glutamine amidotransferase class-I NW98_RS02760 PF00977 Histidine biosynthesis protein NW98_RS02765 PF00977 Histidine biosynthesis protein NW98_RS02770 PF01502 Phosphoribosyl-AMP cyclohydrolase NW98_RS02775 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NW98_RS02790 PF02416 mttA/Hcf106 family NW98_RS02795 PF02416 mttA/Hcf106 family NW98_RS02800 PF00902 Sec-independent protein translocase protein (TatC) NW98_RS02810 PF17820 PDZ domain NW98_RS02810 PF13180 PDZ domain NW98_RS02815 PF01784 NIF3 (NGG1p interacting factor 3) NW98_RS02820 PF00355 Rieske [2Fe-2S] domain NW98_RS02820 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NW98_RS02825 PF00033 Cytochrome b/b6/petB NW98_RS02825 PF00032 Cytochrome b(C-terminal)/b6/petD NW98_RS02830 PF02167 Cytochrome C1 family NW98_RS02835 PF00043 Glutathione S-transferase, C-terminal domain NW98_RS02835 PF02798 Glutathione S-transferase, N-terminal domain NW98_RS02840 PF04386 Stringent starvation protein B NW98_RS02860 PF01381 Helix-turn-helix NW98_RS02865 PF05973 Phage derived protein Gp49-like (DUF891) NW98_RS02880 PF01313 Bacterial export proteins, family 3 NW98_RS02885 PF01311 Bacterial export proteins, family 1 NW98_RS02890 PF00376 MerR family regulatory protein NW98_RS02890 PF09278 MerR, DNA binding NW98_RS02895 PF13649 Methyltransferase domain NW98_RS02910 PF00005 ABC transporter NW98_RS02915 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS02920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS02920 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS02925 PF00072 Response regulator receiver domain NW98_RS02925 PF00486 Transcriptional regulatory protein, C terminal NW98_RS02930 PF13609 Gram-negative porin NW98_RS02940 PF01555 DNA methylase NW98_RS02940 PF18273 Type III R-M EcoP15I C-terminal domain NW98_RS02945 PF04851 Type III restriction enzyme, res subunit NW98_RS02945 PF08774 VRR-NUC domain NW98_RS02955 PF13609 Gram-negative porin NW98_RS02970 PF00005 ABC transporter NW98_RS02980 PF12399 Branched-chain amino acid ATP-binding cassette transporter NW98_RS02980 PF00005 ABC transporter NW98_RS02985 PF02653 Branched-chain amino acid transport system / permease component NW98_RS02985 PF11862 Domain of unknown function (DUF3382) NW98_RS03000 PF00171 Aldehyde dehydrogenase family NW98_RS03010 PF10703 MoaF N-terminal domain NW98_RS03010 PF17409 MoaF C-terminal domain NW98_RS03020 PF00732 GMC oxidoreductase NW98_RS03020 PF05199 GMC oxidoreductase NW98_RS03030 PF03551 Transcriptional regulator PadR-like family NW98_RS03070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS03070 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS03070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS03080 PF00108 Thiolase, N-terminal domain NW98_RS03080 PF02803 Thiolase, C-terminal domain NW98_RS03085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NW98_RS03085 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS03085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NW98_RS03095 PF02515 CoA-transferase family III NW98_RS03125 PF00813 FliP family NW98_RS03130 PF04347 Flagellar biosynthesis protein, FliO NW98_RS03135 PF16973 Flagellar motor switch protein FliN N-terminal NW98_RS03135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NW98_RS03140 PF02154 Flagellar motor switch protein FliM NW98_RS03140 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NW98_RS03155 PF04172 LrgB-like family NW98_RS03160 PF03788 LrgA family NW98_RS03165 PF03466 LysR substrate binding domain NW98_RS03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS03175 PF01047 MarR family NW98_RS03185 PF02321 Outer membrane efflux protein NW98_RS03205 PF03934 Type II secretion system (T2SS), protein K NW98_RS03215 PF07963 Prokaryotic N-terminal methylation motif NW98_RS03215 PF02501 Type II secretion system (T2SS), protein I NW98_RS03220 PF12019 Type II transport protein GspH NW98_RS03220 PF07963 Prokaryotic N-terminal methylation motif NW98_RS03225 PF08334 Type II secretion system (T2SS), protein G NW98_RS03225 PF07963 Prokaryotic N-terminal methylation motif NW98_RS03240 PF00482 Type II secretion system (T2SS), protein F NW98_RS03245 PF00437 Type II/IV secretion system protein NW98_RS03250 PF03958 Bacterial type II/III secretion system short domain NW98_RS03250 PF00263 Bacterial type II and III secretion system protein NW98_RS03255 PF01464 Transglycosylase SLT domain NW98_RS03265 PF07683 Cobalamin synthesis protein cobW C-terminal domain NW98_RS03265 PF02492 CobW/HypB/UreG, nucleotide-binding domain NW98_RS03275 PF01491 Frataxin-like domain NW98_RS03285 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NW98_RS03285 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NW98_RS03300 PF01794 Ferric reductase like transmembrane component NW98_RS03305 PF00174 Oxidoreductase molybdopterin binding domain NW98_RS03325 PF07729 FCD domain NW98_RS03325 PF00392 Bacterial regulatory proteins, gntR family NW98_RS03340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS03340 PF03466 LysR substrate binding domain NW98_RS03345 PF00484 Carbonic anhydrase NW98_RS03350 PF02560 Cyanate lyase C-terminal domain NW98_RS03355 PF07690 Major Facilitator Superfamily NW98_RS03365 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NW98_RS03365 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NW98_RS03370 PF00456 Transketolase, thiamine diphosphate binding domain NW98_RS03370 PF02780 Transketolase, C-terminal domain NW98_RS03370 PF02779 Transketolase, pyrimidine binding domain NW98_RS03375 PF17284 Spermidine synthase tetramerisation domain NW98_RS03385 PF04452 RNA methyltransferase NW98_RS03405 PF00390 Malic enzyme, N-terminal domain NW98_RS03405 PF03949 Malic enzyme, NAD binding domain NW98_RS03405 PF01515 Phosphate acetyl/butaryl transferase NW98_RS03410 PF00586 AIR synthase related protein, N-terminal domain NW98_RS03410 PF02769 AIR synthase related protein, C-terminal domain NW98_RS03415 PF04608 Phosphatidylglycerophosphatase A NW98_RS03420 PF02464 Competence-damaged protein NW98_RS03425 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NW98_RS03440 PF02653 Branched-chain amino acid transport system / permease component NW98_RS03445 PF00005 ABC transporter NW98_RS03450 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NW98_RS03465 PF05035 2-keto-3-deoxy-galactonokinase NW98_RS03470 PF09339 IclR helix-turn-helix domain NW98_RS03470 PF01614 Bacterial transcriptional regulator NW98_RS03490 PF00912 Transglycosylase NW98_RS03495 PF01488 Shikimate / quinate 5-dehydrogenase NW98_RS03495 PF08501 Shikimate dehydrogenase substrate binding domain NW98_RS03495 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NW98_RS03500 PF00773 RNB domain NW98_RS03505 PF05728 Uncharacterised protein family (UPF0227) NW98_RS03510 PF01225 Mur ligase family, catalytic domain NW98_RS03510 PF02875 Mur ligase family, glutamate ligase domain NW98_RS03510 PF08245 Mur ligase middle domain NW98_RS03520 PF00578 AhpC/TSA family NW98_RS03525 PF01220 Dehydroquinase class II NW98_RS03530 PF00364 Biotin-requiring enzyme NW98_RS03535 PF02785 Biotin carboxylase C-terminal domain NW98_RS03535 PF00289 Biotin carboxylase, N-terminal domain NW98_RS03535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NW98_RS03550 PF08534 Redoxin NW98_RS03555 PF00294 pfkB family carbohydrate kinase NW98_RS03575 PF00268 Ribonucleotide reductase, small chain NW98_RS03585 PF03477 ATP cone domain NW98_RS03585 PF00317 Ribonucleotide reductase, all-alpha domain NW98_RS03585 PF02867 Ribonucleotide reductase, barrel domain NW98_RS03595 PF01510 N-acetylmuramoyl-L-alanine amidase NW98_RS03605 PF01578 Cytochrome C assembly protein NW98_RS03610 PF00448 SRP54-type protein, GTPase domain NW98_RS03610 PF02881 SRP54-type protein, helical bundle domain NW98_RS03610 PF02978 Signal peptide binding domain NW98_RS03615 PF00156 Phosphoribosyl transferase domain NW98_RS03620 PF01914 MarC family integral membrane protein NW98_RS03625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NW98_RS03625 PF03129 Anticodon binding domain NW98_RS03625 PF04073 Aminoacyl-tRNA editing domain NW98_RS03635 PF00293 NUDIX domain NW98_RS03650 PF01472 PUA domain NW98_RS03650 PF00696 Amino acid kinase family NW98_RS03655 PF01018 GTP1/OBG NW98_RS03655 PF01926 50S ribosome-binding GTPase NW98_RS03660 PF01016 Ribosomal L27 protein NW98_RS03665 PF00829 Ribosomal prokaryotic L21 protein NW98_RS03670 PF00348 Polyprenyl synthetase NW98_RS03695 PF03471 Transporter associated domain NW98_RS03695 PF01595 Cyclin M transmembrane N-terminal domain NW98_RS03695 PF00571 CBS domain NW98_RS03700 PF00437 Type II/IV secretion system protein NW98_RS03700 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NW98_RS03705 PF00482 Type II secretion system (T2SS), protein F NW98_RS03710 PF01478 Type IV leader peptidase family NW98_RS03710 PF06750 Bacterial Peptidase A24 N-terminal domain NW98_RS03715 PF01121 Dephospho-CoA kinase NW98_RS03720 PF07072 Cell division protein NW98_RS03725 PF03884 DNA gyrase inhibitor YacG NW98_RS03730 PF00293 NUDIX domain NW98_RS03740 PF01960 ArgJ family NW98_RS03745 PF02810 SEC-C motif NW98_RS03745 PF07516 SecA Wing and Scaffold domain NW98_RS03745 PF07517 SecA DEAD-like domain NW98_RS03745 PF01043 SecA preprotein cross-linking domain NW98_RS03760 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NW98_RS03765 PF08534 Redoxin NW98_RS03770 PF00091 Tubulin/FtsZ family, GTPase domain NW98_RS03770 PF12327 FtsZ family, C-terminal domain NW98_RS03780 PF02491 SHS2 domain inserted in FTSA NW98_RS03785 PF08478 POTRA domain, FtsQ-type NW98_RS03785 PF03799 Cell division protein FtsQ NW98_RS03790 PF01820 D-ala D-ala ligase N-terminus NW98_RS03790 PF07478 D-ala D-ala ligase C-terminus NW98_RS03795 PF02875 Mur ligase family, glutamate ligase domain NW98_RS03795 PF08245 Mur ligase middle domain NW98_RS03795 PF01225 Mur ligase family, catalytic domain NW98_RS03800 PF03033 Glycosyltransferase family 28 N-terminal domain NW98_RS03800 PF04101 Glycosyltransferase family 28 C-terminal domain NW98_RS03805 PF01098 Cell cycle protein NW98_RS03810 PF02875 Mur ligase family, glutamate ligase domain NW98_RS03810 PF08245 Mur ligase middle domain NW98_RS03815 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 NW98_RS03815 PF00953 Glycosyl transferase family 4 NW98_RS03820 PF02875 Mur ligase family, glutamate ligase domain NW98_RS03820 PF01225 Mur ligase family, catalytic domain NW98_RS03820 PF08245 Mur ligase middle domain NW98_RS03825 PF08245 Mur ligase middle domain NW98_RS03825 PF02875 Mur ligase family, glutamate ligase domain NW98_RS03830 PF00905 Penicillin binding protein transpeptidase domain NW98_RS03830 PF03717 Penicillin-binding Protein dimerisation domain NW98_RS03835 PF04999 Cell division protein FtsL NW98_RS03840 PF01795 MraW methylase family NW98_RS03845 PF02381 MraZ protein, putative antitoxin-like NW98_RS03850 PF03232 Ubiquinone biosynthesis protein COQ7 NW98_RS03855 PF13609 Gram-negative porin NW98_RS03865 PF02574 Homocysteine S-methyltransferase NW98_RS03865 PF02607 B12 binding domain NW98_RS03865 PF02965 Vitamin B12 dependent methionine synthase, activation domain NW98_RS03865 PF02310 B12 binding domain NW98_RS03865 PF00809 Pterin binding enzyme NW98_RS03870 PF02310 B12 binding domain NW98_RS03870 PF02965 Vitamin B12 dependent methionine synthase, activation domain NW98_RS03870 PF02607 B12 binding domain NW98_RS03870 PF00809 Pterin binding enzyme NW98_RS03870 PF02574 Homocysteine S-methyltransferase NW98_RS03875 PF12091 Protein of unknown function (DUF3567) NW98_RS03905 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS03930 PF01467 Cytidylyltransferase-like NW98_RS03940 PF03309 Type III pantothenate kinase NW98_RS03945 PF02237 Biotin protein ligase C terminal domain NW98_RS03945 PF03099 Biotin/lipoate A/B protein ligase family NW98_RS03945 PF08279 HTH domain NW98_RS03955 PF02872 5'-nucleotidase, C-terminal domain NW98_RS03955 PF00149 Calcineurin-like phosphoesterase NW98_RS03960 PF02405 Permease MlaE NW98_RS03965 PF00005 ABC transporter NW98_RS04000 PF07943 Penicillin-binding protein 5, C-terminal domain NW98_RS04000 PF00768 D-alanyl-D-alanine carboxypeptidase NW98_RS04005 PF01063 Amino-transferase class IV NW98_RS04010 PF04359 Protein of unknown function (DUF493) NW98_RS04015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS04015 PF03466 LysR substrate binding domain NW98_RS04025 PF03099 Biotin/lipoate A/B protein ligase family NW98_RS04030 PF04055 Radical SAM superfamily NW98_RS04030 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NW98_RS04060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NW98_RS04060 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS04060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NW98_RS04065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS04065 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS04065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS04070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS04070 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS04070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS04075 PF02515 CoA-transferase family III NW98_RS04085 PF00474 Sodium:solute symporter family NW98_RS04090 PF00375 Sodium:dicarboxylate symporter family NW98_RS04100 PF02954 Bacterial regulatory protein, Fis family NW98_RS04100 PF00072 Response regulator receiver domain NW98_RS04100 PF00158 Sigma-54 interaction domain NW98_RS04105 PF00578 AhpC/TSA family NW98_RS04120 PF00501 AMP-binding enzyme NW98_RS04120 PF13193 AMP-binding enzyme C-terminal domain NW98_RS04120 PF00550 Phosphopantetheine attachment site NW98_RS04120 PF00668 Condensation domain NW98_RS04120 PF00975 Thioesterase domain NW98_RS04140 PF01078 Magnesium chelatase, subunit ChlI NW98_RS04140 PF13335 Magnesium chelatase, subunit ChlI C-terminal NW98_RS04145 PF04380 Membrane fusogenic activity NW98_RS04150 PF00543 Nitrogen regulatory protein P-II NW98_RS04155 PF00909 Ammonium Transporter Family NW98_RS04240 PF13609 Gram-negative porin NW98_RS04260 PF03831 PhnA domain NW98_RS04260 PF08274 PhnA Zinc-Ribbon NW98_RS04295 PF00860 Permease family NW98_RS04305 PF00669 Bacterial flagellin N-terminal helical region NW98_RS04310 PF00460 Flagella basal body rod protein NW98_RS04310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NW98_RS04315 PF07317 Flagellar regulator YcgR NW98_RS04315 PF07238 PilZ domain NW98_RS04320 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NW98_RS04320 PF10135 Rod binding protein NW98_RS04325 PF02119 Flagellar P-ring protein NW98_RS04330 PF02107 Flagellar L-ring protein NW98_RS04335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NW98_RS04335 PF00460 Flagella basal body rod protein NW98_RS04340 PF00460 Flagella basal body rod protein NW98_RS04340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NW98_RS04345 PF00460 Flagella basal body rod protein NW98_RS04345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NW98_RS04345 PF07559 Flagellar basal body protein FlaE NW98_RS04350 PF03963 Flagellar hook capping protein - N-terminal region NW98_RS04350 PF13860 FlgD Ig-like domain NW98_RS04350 PF13861 FlgD Tudor-like domain NW98_RS04355 PF00460 Flagella basal body rod protein NW98_RS04355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NW98_RS04360 PF00460 Flagella basal body rod protein NW98_RS04370 PF17656 FlgA N-terminal domain NW98_RS04370 PF13144 Chaperone for flagella basal body P-ring formation NW98_RS04375 PF04316 Anti-sigma-28 factor, FlgM NW98_RS04405 PF12627 Probable RNA and SrmB- binding site of polymerase A NW98_RS04405 PF01966 HD domain NW98_RS04405 PF01743 Poly A polymerase head domain NW98_RS04420 PF14718 Soluble lytic murein transglycosylase L domain NW98_RS04420 PF01464 Transglycosylase SLT domain NW98_RS04425 PF01812 5-formyltetrahydrofolate cyclo-ligase family NW98_RS04435 PF02682 Carboxyltransferase domain, subdomain C and D NW98_RS04440 PF02626 Carboxyltransferase domain, subdomain A and B NW98_RS04445 PF03746 LamB/YcsF family NW98_RS04470 PF00005 ABC transporter NW98_RS04470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW98_RS04475 PF00005 ABC transporter NW98_RS04475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW98_RS04485 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS04490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW98_RS04500 PF07690 Major Facilitator Superfamily NW98_RS04505 PF01355 High potential iron-sulfur protein NW98_RS04510 PF01266 FAD dependent oxidoreductase NW98_RS04515 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS04515 PF05362 Lon protease (S16) C-terminal proteolytic domain NW98_RS04530 PF03372 Endonuclease/Exonuclease/phosphatase family NW98_RS04535 PF01810 LysE type translocator NW98_RS04540 PF00970 Oxidoreductase FAD-binding domain NW98_RS04540 PF00175 Oxidoreductase NAD-binding domain NW98_RS04550 PF00072 Response regulator receiver domain NW98_RS04550 PF00196 Bacterial regulatory proteins, luxR family NW98_RS04555 PF13520 Amino acid permease NW98_RS04570 PF01312 FlhB HrpN YscU SpaS Family NW98_RS04585 PF02561 Flagellar protein FliS NW98_RS04590 PF02049 Flagellar hook-basal body complex protein FliE NW98_RS04595 PF01514 Secretory protein of YscJ/FliF family NW98_RS04595 PF08345 Flagellar M-ring protein C-terminal NW98_RS04600 PF14841 FliG middle domain NW98_RS04600 PF01706 FliG C-terminal domain NW98_RS04600 PF14842 FliG N-terminal domain NW98_RS04610 PF18269 T3SS EscN ATPase C-terminal domain NW98_RS04610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW98_RS04625 PF00732 GMC oxidoreductase NW98_RS04625 PF05199 GMC oxidoreductase NW98_RS04635 PF00171 Aldehyde dehydrogenase family NW98_RS04645 PF01636 Phosphotransferase enzyme family NW98_RS04655 PF07690 Major Facilitator Superfamily NW98_RS04675 PF00248 Aldo/keto reductase family NW98_RS04700 PF02772 S-adenosylmethionine synthetase, central domain NW98_RS04700 PF02773 S-adenosylmethionine synthetase, C-terminal domain NW98_RS04700 PF00438 S-adenosylmethionine synthetase, N-terminal domain NW98_RS04705 PF03279 Bacterial lipid A biosynthesis acyltransferase NW98_RS04710 PF01678 Diaminopimelate epimerase NW98_RS04720 PF02899 Phage integrase, N-terminal SAM-like domain NW98_RS04720 PF00589 Phage integrase family NW98_RS04725 PF10672 S-adenosylmethionine-dependent methyltransferase NW98_RS04725 PF17785 PUA-like domain NW98_RS04730 PF02492 CobW/HypB/UreG, nucleotide-binding domain NW98_RS04730 PF07683 Cobalamin synthesis protein cobW C-terminal domain NW98_RS04740 PF01258 Prokaryotic dksA/traR C4-type zinc finger NW98_RS04750 PF00227 Proteasome subunit NW98_RS04755 PF07724 AAA domain (Cdc48 subfamily) NW98_RS04755 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS04760 PF00072 Response regulator receiver domain NW98_RS04765 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS04765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS04775 PF00696 Amino acid kinase family NW98_RS04785 PF00440 Bacterial regulatory proteins, tetR family NW98_RS04790 PF00561 alpha/beta hydrolase fold NW98_RS04800 PF07690 Major Facilitator Superfamily NW98_RS04810 PF06719 AraC-type transcriptional regulator N-terminus NW98_RS04810 PF12833 Helix-turn-helix domain NW98_RS04820 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS04820 PF01610 Transposase NW98_RS04820 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS04825 PF00107 Zinc-binding dehydrogenase NW98_RS04825 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS04845 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NW98_RS04845 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NW98_RS04855 PF00381 PTS HPr component phosphorylation site NW98_RS04860 PF05524 PEP-utilising enzyme, N-terminal NW98_RS04860 PF00391 PEP-utilising enzyme, mobile domain NW98_RS04860 PF02896 PEP-utilising enzyme, TIM barrel domain NW98_RS04870 PF00899 ThiF family NW98_RS04875 PF03572 Peptidase family S41 NW98_RS04875 PF13180 PDZ domain NW98_RS04880 PF00300 Histidine phosphatase superfamily (branch 1) NW98_RS04885 PF00581 Rhodanese-like domain NW98_RS04890 PF00462 Glutaredoxin NW98_RS04895 PF02556 Preprotein translocase subunit SecB NW98_RS04900 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NW98_RS04900 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NW98_RS04905 PF01661 Macro domain NW98_RS04915 PF00588 SpoU rRNA Methylase family NW98_RS04920 PF00156 Phosphoribosyl transferase domain NW98_RS04925 PF08241 Methyltransferase domain NW98_RS04935 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NW98_RS04935 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NW98_RS04940 PF00115 Cytochrome C and Quinol oxidase polypeptide I NW98_RS04950 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NW98_RS04960 PF00510 Cytochrome c oxidase subunit III NW98_RS04980 PF02628 Cytochrome oxidase assembly protein NW98_RS04985 PF01040 UbiA prenyltransferase family NW98_RS04990 PF02630 SCO1/SenC NW98_RS05000 PF02203 Tar ligand binding domain homologue NW98_RS05000 PF00672 HAMP domain NW98_RS05000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS05010 PF03180 NLPA lipoprotein NW98_RS05020 PF06751 Ethanolamine ammonia lyase large subunit (EutB) NW98_RS05025 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NW98_RS05035 PF00171 Aldehyde dehydrogenase family NW98_RS05045 PF12833 Helix-turn-helix domain NW98_RS05055 PF00205 Thiamine pyrophosphate enzyme, central domain NW98_RS05055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW98_RS05055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW98_RS05065 PF03315 Serine dehydratase beta chain NW98_RS05065 PF03313 Serine dehydratase alpha chain NW98_RS05080 PF02347 Glycine cleavage system P-protein NW98_RS05085 PF01597 Glycine cleavage H-protein NW98_RS05090 PF08669 Glycine cleavage T-protein C-terminal barrel domain NW98_RS05090 PF01571 Aminomethyltransferase folate-binding domain NW98_RS05100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NW98_RS05100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NW98_RS05120 PF00580 UvrD/REP helicase N-terminal domain NW98_RS05120 PF13361 UvrD-like helicase C-terminal domain NW98_RS05125 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NW98_RS05135 PF00589 Phage integrase family NW98_RS05160 PF00009 Elongation factor Tu GTP binding domain NW98_RS05160 PF03144 Elongation factor Tu domain 2 NW98_RS05160 PF03143 Elongation factor Tu C-terminal domain NW98_RS05170 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NW98_RS05175 PF02357 Transcription termination factor nusG NW98_RS05175 PF00467 KOW motif NW98_RS05180 PF03946 Ribosomal protein L11, N-terminal domain NW98_RS05180 PF00298 Ribosomal protein L11, RNA binding domain NW98_RS05185 PF00687 Ribosomal protein L1p/L10e family NW98_RS05190 PF00466 Ribosomal protein L10 NW98_RS05195 PF16320 Ribosomal protein L7/L12 dimerisation domain NW98_RS05195 PF00542 Ribosomal protein L7/L12 C-terminal domain NW98_RS05200 PF10385 RNA polymerase beta subunit external 1 domain NW98_RS05200 PF04561 RNA polymerase Rpb2, domain 2 NW98_RS05200 PF04563 RNA polymerase beta subunit NW98_RS05200 PF04560 RNA polymerase Rpb2, domain 7 NW98_RS05200 PF00562 RNA polymerase Rpb2, domain 6 NW98_RS05200 PF04565 RNA polymerase Rpb2, domain 3 NW98_RS05205 PF05000 RNA polymerase Rpb1, domain 4 NW98_RS05205 PF04983 RNA polymerase Rpb1, domain 3 NW98_RS05205 PF04998 RNA polymerase Rpb1, domain 5 NW98_RS05205 PF04997 RNA polymerase Rpb1, domain 1 NW98_RS05205 PF00623 RNA polymerase Rpb1, domain 2 NW98_RS05215 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS05215 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS05215 PF01610 Transposase NW98_RS05220 PF00271 Helicase conserved C-terminal domain NW98_RS05220 PF00570 HRDC domain NW98_RS05220 PF09382 RQC domain NW98_RS05220 PF00270 DEAD/DEAH box helicase NW98_RS05220 PF16124 RecQ zinc-binding NW98_RS05225 PF00164 Ribosomal protein S12/S23 NW98_RS05230 PF00177 Ribosomal protein S7p/S5e NW98_RS05235 PF00009 Elongation factor Tu GTP binding domain NW98_RS05235 PF03764 Elongation factor G, domain IV NW98_RS05235 PF03144 Elongation factor Tu domain 2 NW98_RS05235 PF14492 Elongation Factor G, domain II NW98_RS05235 PF00679 Elongation factor G C-terminus NW98_RS05240 PF03144 Elongation factor Tu domain 2 NW98_RS05240 PF03143 Elongation factor Tu C-terminal domain NW98_RS05240 PF00009 Elongation factor Tu GTP binding domain NW98_RS05245 PF00338 Ribosomal protein S10p/S20e NW98_RS05250 PF00297 Ribosomal protein L3 NW98_RS05255 PF00573 Ribosomal protein L4/L1 family NW98_RS05260 PF00276 Ribosomal protein L23 NW98_RS05265 PF03947 Ribosomal Proteins L2, C-terminal domain NW98_RS05265 PF00181 Ribosomal Proteins L2, RNA binding domain NW98_RS05270 PF00203 Ribosomal protein S19 NW98_RS05275 PF00237 Ribosomal protein L22p/L17e NW98_RS05280 PF07650 KH domain NW98_RS05280 PF00189 Ribosomal protein S3, C-terminal domain NW98_RS05285 PF00252 Ribosomal protein L16p/L10e NW98_RS05290 PF00831 Ribosomal L29 protein NW98_RS05295 PF00366 Ribosomal protein S17 NW98_RS05300 PF00238 Ribosomal protein L14p/L23e NW98_RS05305 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NW98_RS05310 PF00673 ribosomal L5P family C-terminus NW98_RS05310 PF00281 Ribosomal protein L5 NW98_RS05315 PF00253 Ribosomal protein S14p/S29e NW98_RS05320 PF00410 Ribosomal protein S8 NW98_RS05325 PF00347 Ribosomal protein L6 NW98_RS05330 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NW98_RS05335 PF03719 Ribosomal protein S5, C-terminal domain NW98_RS05335 PF00333 Ribosomal protein S5, N-terminal domain NW98_RS05340 PF00327 Ribosomal protein L30p/L7e NW98_RS05345 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NW98_RS05350 PF00344 SecY translocase NW98_RS05355 PF01176 Translation initiation factor 1A / IF-1 NW98_RS05360 PF00444 Ribosomal protein L36 NW98_RS05365 PF00416 Ribosomal protein S13/S18 NW98_RS05370 PF00411 Ribosomal protein S11 NW98_RS05375 PF01479 S4 domain NW98_RS05375 PF00163 Ribosomal protein S4/S9 N-terminal domain NW98_RS05380 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NW98_RS05380 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NW98_RS05380 PF01000 RNA polymerase Rpb3/RpoA insert domain NW98_RS05385 PF01196 Ribosomal protein L17 NW98_RS05395 PF02683 Cytochrome C biogenesis protein transmembrane region NW98_RS05395 PF11412 Disulphide bond corrector protein DsbC NW98_RS05400 PF00490 Delta-aminolevulinic acid dehydratase NW98_RS05405 PF01926 50S ribosome-binding GTPase NW98_RS05410 PF00034 Cytochrome c NW98_RS05415 PF05140 ResB-like family NW98_RS05420 PF01578 Cytochrome C assembly protein NW98_RS05445 PF03922 OmpW family NW98_RS05465 PF01118 Semialdehyde dehydrogenase, NAD binding domain NW98_RS05470 PF03358 NADPH-dependent FMN reductase NW98_RS05480 PF01161 Phosphatidylethanolamine-binding protein NW98_RS05485 PF00156 Phosphoribosyl transferase domain NW98_RS05495 PF03949 Malic enzyme, NAD binding domain NW98_RS05495 PF00390 Malic enzyme, N-terminal domain NW98_RS05495 PF01515 Phosphate acetyl/butaryl transferase NW98_RS05525 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW98_RS05530 PF13404 AsnC-type helix-turn-helix domain NW98_RS05530 PF01037 Lrp/AsnC ligand binding domain NW98_RS05540 PF00440 Bacterial regulatory proteins, tetR family NW98_RS05540 PF17932 Tetracyclin repressor-like, C-terminal domain NW98_RS05550 PF00175 Oxidoreductase NAD-binding domain NW98_RS05550 PF00111 2Fe-2S iron-sulfur cluster binding domain NW98_RS05550 PF00970 Oxidoreductase FAD-binding domain NW98_RS05560 PF05138 Phenylacetic acid catabolic protein NW98_RS05565 PF06243 Phenylacetic acid degradation B NW98_RS05570 PF05138 Phenylacetic acid catabolic protein NW98_RS05635 PF02082 Transcriptional regulator NW98_RS05640 PF00391 PEP-utilising enzyme, mobile domain NW98_RS05640 PF01370 NAD dependent epimerase/dehydratase family NW98_RS05660 PF13404 AsnC-type helix-turn-helix domain NW98_RS05660 PF01037 Lrp/AsnC ligand binding domain NW98_RS05665 PF00005 ABC transporter NW98_RS05665 PF08402 TOBE domain NW98_RS05670 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS05675 PF13416 Bacterial extracellular solute-binding protein NW98_RS05690 PF00324 Amino acid permease NW98_RS05700 PF12805 FUSC-like inner membrane protein yccS NW98_RS05710 PF17946 RecC C-terminal domain NW98_RS05715 PF12705 PD-(D/E)XK nuclease superfamily NW98_RS05715 PF00580 UvrD/REP helicase N-terminal domain NW98_RS05715 PF13361 UvrD-like helicase C-terminal domain NW98_RS05720 PF13538 UvrD-like helicase C-terminal domain NW98_RS05725 PF00472 RF-1 domain NW98_RS05760 PF01964 Radical SAM ThiC family NW98_RS05760 PF13667 ThiC-associated domain NW98_RS05780 PF01292 Prokaryotic cytochrome b561 NW98_RS05785 PF00174 Oxidoreductase molybdopterin binding domain NW98_RS05800 PF00892 EamA-like transporter family NW98_RS05810 PF07690 Major Facilitator Superfamily NW98_RS05840 PF00149 Calcineurin-like phosphoesterase NW98_RS05850 PF00005 ABC transporter NW98_RS05850 PF08402 TOBE domain NW98_RS05855 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS05870 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS05880 PF00356 Bacterial regulatory proteins, lacI family NW98_RS05915 PF00072 Response regulator receiver domain NW98_RS05915 PF00990 Diguanylate cyclase, GGDEF domain NW98_RS05940 PF00392 Bacterial regulatory proteins, gntR family NW98_RS05940 PF00155 Aminotransferase class I and II NW98_RS05945 PF01037 Lrp/AsnC ligand binding domain NW98_RS05955 PF01380 SIS domain NW98_RS05960 PF03055 Retinal pigment epithelial membrane protein NW98_RS05970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS05970 PF03466 LysR substrate binding domain NW98_RS06005 PF00155 Aminotransferase class I and II NW98_RS06005 PF00392 Bacterial regulatory proteins, gntR family NW98_RS06020 PF00011 Hsp20/alpha crystallin family NW98_RS06050 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain NW98_RS06050 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain NW98_RS06055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NW98_RS06055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NW98_RS06065 PF03466 LysR substrate binding domain NW98_RS06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS06085 PF16957 Malonate decarboxylase, alpha subunit, transporter NW98_RS06090 PF06857 Malonate decarboxylase delta subunit (MdcD) NW98_RS06095 PF01039 Carboxyl transferase domain NW98_RS06105 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NW98_RS06110 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NW98_RS06115 PF00698 Acyl transferase domain NW98_RS06120 PF13091 PLD-like domain NW98_RS06160 PF00083 Sugar (and other) transporter NW98_RS06160 PF08946 Osmosensory transporter coiled coil NW98_RS06170 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NW98_RS06175 PF00929 Exonuclease NW98_RS06180 PF00075 RNase H NW98_RS06185 PF08241 Methyltransferase domain NW98_RS06190 PF16123 Hydroxyacylglutathione hydrolase C-terminus NW98_RS06190 PF00753 Metallo-beta-lactamase superfamily NW98_RS06195 PF01476 LysM domain NW98_RS06195 PF01464 Transglycosylase SLT domain NW98_RS06215 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term NW98_RS06215 PF12833 Helix-turn-helix domain NW98_RS06225 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NW98_RS06225 PF00117 Glutamine amidotransferase class-I NW98_RS06230 PF01810 LysE type translocator NW98_RS06235 PF02142 MGS-like domain NW98_RS06235 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NW98_RS06235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NW98_RS06240 PF01272 Transcription elongation factor, GreA/GreB, C-term NW98_RS06240 PF03449 Transcription elongation factor, N-terminal NW98_RS06250 PF01985 CRS1 / YhbY (CRM) domain NW98_RS06255 PF01728 FtsJ-like methyltransferase NW98_RS06260 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS06260 PF06480 FtsH Extracellular NW98_RS06260 PF01434 Peptidase family M41 NW98_RS06260 PF17862 AAA+ lid domain NW98_RS06265 PF00809 Pterin binding enzyme NW98_RS06270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NW98_RS06270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NW98_RS06270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NW98_RS06270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NW98_RS06280 PF12849 PBP superfamily domain NW98_RS06285 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS06290 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS06295 PF00005 ABC transporter NW98_RS06300 PF01895 PhoU domain NW98_RS06305 PF00486 Transcriptional regulatory protein, C terminal NW98_RS06305 PF00072 Response regulator receiver domain NW98_RS06310 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS06310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS06310 PF00989 PAS fold NW98_RS06310 PF11808 Phosphate regulon sensor protein PhoR NW98_RS06320 PF13089 Polyphosphate kinase N-terminal domain NW98_RS06320 PF17941 Polyphosphate kinase C-terminal domain 1 NW98_RS06320 PF13090 Polyphosphate kinase C-terminal domain 2 NW98_RS06320 PF02503 Polyphosphate kinase middle domain NW98_RS06325 PF02541 Ppx/GppA phosphatase family NW98_RS06400 PF01554 MatE NW98_RS06410 PF13193 AMP-binding enzyme C-terminal domain NW98_RS06410 PF00501 AMP-binding enzyme NW98_RS06415 PF01476 LysM domain NW98_RS06415 PF01551 Peptidase family M23 NW98_RS06455 PF04072 Leucine carboxyl methyltransferase NW98_RS06460 PF00155 Aminotransferase class I and II NW98_RS06460 PF00392 Bacterial regulatory proteins, gntR family NW98_RS06480 PF00128 Alpha amylase, catalytic domain NW98_RS06485 PF02446 4-alpha-glucanotransferase NW98_RS06490 PF00128 Alpha amylase, catalytic domain NW98_RS06490 PF11941 Domain of unknown function (DUF3459) NW98_RS06495 PF00128 Alpha amylase, catalytic domain NW98_RS06495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NW98_RS06505 PF16657 Maltogenic Amylase, C-terminal domain NW98_RS06505 PF00128 Alpha amylase, catalytic domain NW98_RS06510 PF00128 Alpha amylase, catalytic domain NW98_RS06510 PF11896 Domain of unknown function (DUF3416) NW98_RS06525 PF10503 Esterase PHB depolymerase NW98_RS06560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS06560 PF03466 LysR substrate binding domain NW98_RS06565 PF00486 Transcriptional regulatory protein, C terminal NW98_RS06565 PF00072 Response regulator receiver domain NW98_RS06575 PF05666 Fels-1 Prophage Protein-like NW98_RS06590 PF00072 Response regulator receiver domain NW98_RS06590 PF00486 Transcriptional regulatory protein, C terminal NW98_RS06600 PF05662 Coiled stalk of trimeric autotransporter adhesin NW98_RS06600 PF05658 Head domain of trimeric autotransporter adhesin NW98_RS06600 PF03895 YadA-like membrane anchor domain NW98_RS06605 PF00691 OmpA family NW98_RS06605 PF01389 OmpA-like transmembrane domain NW98_RS06685 PF04717 Type VI secretion system, phage-baseplate injector NW98_RS06710 PF01566 Natural resistance-associated macrophage protein NW98_RS06745 PF04909 Amidohydrolase NW98_RS06750 PF07690 Major Facilitator Superfamily NW98_RS06760 PF03466 LysR substrate binding domain NW98_RS06760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS06810 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NW98_RS06810 PF00072 Response regulator receiver domain NW98_RS06810 PF01627 Hpt domain NW98_RS06810 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS06810 PF00672 HAMP domain NW98_RS06810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS06815 PF00072 Response regulator receiver domain NW98_RS06815 PF00196 Bacterial regulatory proteins, luxR family NW98_RS06830 PF07690 Major Facilitator Superfamily NW98_RS06840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS06840 PF00529 HlyD membrane-fusion protein of T1SS NW98_RS06850 PF12241 Trans-2-enoyl-CoA reductase catalytic region NW98_RS06850 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NW98_RS06850 PF07055 Enoyl reductase FAD binding domain NW98_RS06855 PF04185 Phosphoesterase family NW98_RS06855 PF05506 Domain of unknown function (DUF756) NW98_RS06860 PF00034 Cytochrome c NW98_RS06860 PF03150 Di-haem cytochrome c peroxidase NW98_RS06890 PF00293 NUDIX domain NW98_RS06900 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NW98_RS06900 PF00749 tRNA synthetases class I (E and Q), catalytic domain NW98_RS06910 PF02515 CoA-transferase family III NW98_RS06920 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NW98_RS06920 PF02272 DHHA1 domain NW98_RS06920 PF01411 tRNA synthetases class II (A) NW98_RS06925 PF03466 LysR substrate binding domain NW98_RS06925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS06965 PF09297 NADH pyrophosphatase zinc ribbon domain NW98_RS06965 PF00293 NUDIX domain NW98_RS06970 PF01906 Putative heavy-metal-binding NW98_RS06980 PF00465 Iron-containing alcohol dehydrogenase NW98_RS06990 PF03061 Thioesterase superfamily NW98_RS06995 PF02653 Branched-chain amino acid transport system / permease component NW98_RS07000 PF12399 Branched-chain amino acid ATP-binding cassette transporter NW98_RS07000 PF00005 ABC transporter NW98_RS07005 PF00005 ABC transporter NW98_RS07010 PF04962 KduI/IolB family NW98_RS07015 PF01261 Xylose isomerase-like TIM barrel NW98_RS07020 PF00205 Thiamine pyrophosphate enzyme, central domain NW98_RS07020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW98_RS07020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW98_RS07025 PF00294 pfkB family carbohydrate kinase NW98_RS07030 PF00005 ABC transporter NW98_RS07035 PF02653 Branched-chain amino acid transport system / permease component NW98_RS07045 PF01418 Helix-turn-helix domain, rpiR family NW98_RS07045 PF01380 SIS domain NW98_RS07050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NW98_RS07050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NW98_RS07055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NW98_RS07055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NW98_RS07065 PF01206 Sulfurtransferase TusA NW98_RS07075 PF00072 Response regulator receiver domain NW98_RS07075 PF00486 Transcriptional regulatory protein, C terminal NW98_RS07085 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS07085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS07085 PF00672 HAMP domain NW98_RS07085 PF14827 Double sensory domain of two-component sensor kinase NW98_RS07085 PF13426 PAS domain NW98_RS07095 PF00483 Nucleotidyl transferase NW98_RS07100 PF10458 Valyl tRNA synthetase tRNA binding arm NW98_RS07100 PF00133 tRNA synthetases class I (I, L, M and V) NW98_RS07100 PF08264 Anticodon-binding domain of tRNA NW98_RS07105 PF13361 UvrD-like helicase C-terminal domain NW98_RS07105 PF00580 UvrD/REP helicase N-terminal domain NW98_RS07110 PF01048 Phosphorylase superfamily NW98_RS07115 PF07690 Major Facilitator Superfamily NW98_RS07120 PF00672 HAMP domain NW98_RS07120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS07120 PF02203 Tar ligand binding domain homologue NW98_RS07130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS07140 PF04632 Fusaric acid resistance protein family NW98_RS07145 PF02321 Outer membrane efflux protein NW98_RS07155 PF03466 LysR substrate binding domain NW98_RS07155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS07170 PF02913 FAD linked oxidases, C-terminal domain NW98_RS07170 PF01565 FAD binding domain NW98_RS07180 PF03358 NADPH-dependent FMN reductase NW98_RS07185 PF03631 Virulence factor BrkB NW98_RS07220 PF01264 Chorismate synthase NW98_RS07235 PF13276 HTH-like domain NW98_RS07235 PF13333 Integrase core domain NW98_RS07235 PF00665 Integrase core domain NW98_RS07250 PF01566 Natural resistance-associated macrophage protein NW98_RS07285 PF04909 Amidohydrolase NW98_RS07290 PF07690 Major Facilitator Superfamily NW98_RS07300 PF03466 LysR substrate binding domain NW98_RS07300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS07350 PF01627 Hpt domain NW98_RS07350 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS07350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS07350 PF00672 HAMP domain NW98_RS07350 PF00072 Response regulator receiver domain NW98_RS07350 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NW98_RS07355 PF00196 Bacterial regulatory proteins, luxR family NW98_RS07355 PF00072 Response regulator receiver domain NW98_RS07370 PF07690 Major Facilitator Superfamily NW98_RS07380 PF00529 HlyD membrane-fusion protein of T1SS NW98_RS07380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS07390 PF07055 Enoyl reductase FAD binding domain NW98_RS07390 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NW98_RS07390 PF12241 Trans-2-enoyl-CoA reductase catalytic region NW98_RS07395 PF05506 Domain of unknown function (DUF756) NW98_RS07395 PF04185 Phosphoesterase family NW98_RS07400 PF03150 Di-haem cytochrome c peroxidase NW98_RS07400 PF00034 Cytochrome c NW98_RS07430 PF00293 NUDIX domain NW98_RS07440 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NW98_RS07440 PF00749 tRNA synthetases class I (E and Q), catalytic domain NW98_RS07450 PF02515 CoA-transferase family III NW98_RS07460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NW98_RS07460 PF01411 tRNA synthetases class II (A) NW98_RS07460 PF02272 DHHA1 domain NW98_RS07465 PF03466 LysR substrate binding domain NW98_RS07465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS07505 PF09297 NADH pyrophosphatase zinc ribbon domain NW98_RS07505 PF00293 NUDIX domain NW98_RS07510 PF01906 Putative heavy-metal-binding NW98_RS07520 PF00465 Iron-containing alcohol dehydrogenase NW98_RS07530 PF03061 Thioesterase superfamily NW98_RS07535 PF02653 Branched-chain amino acid transport system / permease component NW98_RS07540 PF00005 ABC transporter NW98_RS07540 PF12399 Branched-chain amino acid ATP-binding cassette transporter NW98_RS07545 PF00005 ABC transporter NW98_RS07550 PF04962 KduI/IolB family NW98_RS07555 PF01261 Xylose isomerase-like TIM barrel NW98_RS07560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW98_RS07560 PF00205 Thiamine pyrophosphate enzyme, central domain NW98_RS07560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW98_RS07565 PF00294 pfkB family carbohydrate kinase NW98_RS07570 PF00005 ABC transporter NW98_RS07575 PF02653 Branched-chain amino acid transport system / permease component NW98_RS07585 PF01418 Helix-turn-helix domain, rpiR family NW98_RS07585 PF01380 SIS domain NW98_RS07590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NW98_RS07590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NW98_RS07595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NW98_RS07595 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NW98_RS07605 PF01206 Sulfurtransferase TusA NW98_RS07615 PF00486 Transcriptional regulatory protein, C terminal NW98_RS07615 PF00072 Response regulator receiver domain NW98_RS07625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS07625 PF00672 HAMP domain NW98_RS07625 PF14827 Double sensory domain of two-component sensor kinase NW98_RS07625 PF13426 PAS domain NW98_RS07625 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS07635 PF00483 Nucleotidyl transferase NW98_RS07640 PF08264 Anticodon-binding domain of tRNA NW98_RS07640 PF00133 tRNA synthetases class I (I, L, M and V) NW98_RS07640 PF10458 Valyl tRNA synthetase tRNA binding arm NW98_RS07645 PF00580 UvrD/REP helicase N-terminal domain NW98_RS07645 PF13361 UvrD-like helicase C-terminal domain NW98_RS07650 PF01048 Phosphorylase superfamily NW98_RS07655 PF07690 Major Facilitator Superfamily NW98_RS07660 PF00672 HAMP domain NW98_RS07660 PF02203 Tar ligand binding domain homologue NW98_RS07660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS07670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS07680 PF04632 Fusaric acid resistance protein family NW98_RS07685 PF02321 Outer membrane efflux protein NW98_RS07695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS07695 PF03466 LysR substrate binding domain NW98_RS07710 PF01565 FAD binding domain NW98_RS07710 PF02913 FAD linked oxidases, C-terminal domain NW98_RS07720 PF03358 NADPH-dependent FMN reductase NW98_RS07725 PF03631 Virulence factor BrkB NW98_RS07760 PF01264 Chorismate synthase NW98_RS07775 PF00665 Integrase core domain NW98_RS07775 PF13276 HTH-like domain NW98_RS07775 PF13333 Integrase core domain NW98_RS07790 PF01566 Natural resistance-associated macrophage protein NW98_RS07825 PF04909 Amidohydrolase NW98_RS07830 PF07690 Major Facilitator Superfamily NW98_RS07840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS07840 PF03466 LysR substrate binding domain NW98_RS07890 PF01627 Hpt domain NW98_RS07890 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NW98_RS07890 PF00072 Response regulator receiver domain NW98_RS07890 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS07890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS07890 PF00672 HAMP domain NW98_RS07895 PF00072 Response regulator receiver domain NW98_RS07895 PF00196 Bacterial regulatory proteins, luxR family NW98_RS07910 PF07690 Major Facilitator Superfamily NW98_RS07920 PF00529 HlyD membrane-fusion protein of T1SS NW98_RS07920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS07930 PF12241 Trans-2-enoyl-CoA reductase catalytic region NW98_RS07930 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NW98_RS07930 PF07055 Enoyl reductase FAD binding domain NW98_RS07935 PF04185 Phosphoesterase family NW98_RS07935 PF05506 Domain of unknown function (DUF756) NW98_RS07940 PF03150 Di-haem cytochrome c peroxidase NW98_RS07940 PF00034 Cytochrome c NW98_RS07970 PF00293 NUDIX domain NW98_RS07980 PF00749 tRNA synthetases class I (E and Q), catalytic domain NW98_RS07980 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NW98_RS07990 PF02515 CoA-transferase family III NW98_RS08000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NW98_RS08000 PF01411 tRNA synthetases class II (A) NW98_RS08000 PF02272 DHHA1 domain NW98_RS08005 PF03466 LysR substrate binding domain NW98_RS08005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS08045 PF00293 NUDIX domain NW98_RS08045 PF09297 NADH pyrophosphatase zinc ribbon domain NW98_RS08050 PF01906 Putative heavy-metal-binding NW98_RS08060 PF00465 Iron-containing alcohol dehydrogenase NW98_RS08070 PF03061 Thioesterase superfamily NW98_RS08075 PF02653 Branched-chain amino acid transport system / permease component NW98_RS08080 PF00005 ABC transporter NW98_RS08080 PF12399 Branched-chain amino acid ATP-binding cassette transporter NW98_RS08085 PF00005 ABC transporter NW98_RS08090 PF04962 KduI/IolB family NW98_RS08095 PF01261 Xylose isomerase-like TIM barrel NW98_RS08100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW98_RS08100 PF00205 Thiamine pyrophosphate enzyme, central domain NW98_RS08100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW98_RS08105 PF00294 pfkB family carbohydrate kinase NW98_RS08110 PF00005 ABC transporter NW98_RS08115 PF02653 Branched-chain amino acid transport system / permease component NW98_RS08125 PF01418 Helix-turn-helix domain, rpiR family NW98_RS08125 PF01380 SIS domain NW98_RS08130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NW98_RS08130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NW98_RS08135 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NW98_RS08135 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NW98_RS08145 PF01206 Sulfurtransferase TusA NW98_RS08155 PF00072 Response regulator receiver domain NW98_RS08155 PF00486 Transcriptional regulatory protein, C terminal NW98_RS08165 PF13426 PAS domain NW98_RS08165 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS08165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS08165 PF00672 HAMP domain NW98_RS08165 PF14827 Double sensory domain of two-component sensor kinase NW98_RS08175 PF00483 Nucleotidyl transferase NW98_RS08180 PF10458 Valyl tRNA synthetase tRNA binding arm NW98_RS08180 PF00133 tRNA synthetases class I (I, L, M and V) NW98_RS08180 PF08264 Anticodon-binding domain of tRNA NW98_RS08185 PF00580 UvrD/REP helicase N-terminal domain NW98_RS08185 PF13361 UvrD-like helicase C-terminal domain NW98_RS08190 PF01048 Phosphorylase superfamily NW98_RS08195 PF07690 Major Facilitator Superfamily NW98_RS08200 PF00672 HAMP domain NW98_RS08200 PF02203 Tar ligand binding domain homologue NW98_RS08200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS08210 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS08220 PF04632 Fusaric acid resistance protein family NW98_RS08225 PF02321 Outer membrane efflux protein NW98_RS08235 PF03466 LysR substrate binding domain NW98_RS08235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS08300 PF01264 Chorismate synthase NW98_RS08315 PF13276 HTH-like domain NW98_RS08315 PF00665 Integrase core domain NW98_RS08315 PF13333 Integrase core domain NW98_RS08330 PF16861 Carbamoyltransferase C-terminus NW98_RS08330 PF02543 Carbamoyltransferase N-terminus NW98_RS08335 PF01804 Penicillin amidase NW98_RS08345 PF13276 HTH-like domain NW98_RS08345 PF13683 Integrase core domain NW98_RS08385 PF03969 AFG1-like ATPase NW98_RS08390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NW98_RS08390 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS08395 PF02817 e3 binding domain NW98_RS08395 PF00364 Biotin-requiring enzyme NW98_RS08395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NW98_RS08400 PF16078 2-oxoglutarate dehydrogenase N-terminus NW98_RS08400 PF00676 Dehydrogenase E1 component NW98_RS08400 PF16870 2-oxoglutarate dehydrogenase C-terminal NW98_RS08400 PF02779 Transketolase, pyrimidine binding domain NW98_RS08405 PF00679 Elongation factor G C-terminus NW98_RS08405 PF03144 Elongation factor Tu domain 2 NW98_RS08405 PF00009 Elongation factor Tu GTP binding domain NW98_RS08415 PF01047 MarR family NW98_RS08420 PF02321 Outer membrane efflux protein NW98_RS08425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS08425 PF00529 HlyD membrane-fusion protein of T1SS NW98_RS08430 PF07690 Major Facilitator Superfamily NW98_RS08440 PF09157 Pseudouridine synthase II TruB, C-terminal NW98_RS08440 PF16198 tRNA pseudouridylate synthase B C-terminal domain NW98_RS08440 PF01509 TruB family pseudouridylate synthase (N terminal domain) NW98_RS08445 PF02033 Ribosome-binding factor A NW98_RS08450 PF11987 Translation-initiation factor 2 NW98_RS08450 PF00009 Elongation factor Tu GTP binding domain NW98_RS08450 PF08364 Bacterial translation initiation factor IF-2 associated region NW98_RS08450 PF04760 Translation initiation factor IF-2, N-terminal region NW98_RS08455 PF13184 NusA-like KH domain NW98_RS08455 PF08529 NusA N-terminal domain NW98_RS08460 PF02576 RimP N-terminal domain NW98_RS08460 PF17384 RimP C-terminal SH3 domain NW98_RS08465 PF00849 RNA pseudouridylate synthase NW98_RS08465 PF01479 S4 domain NW98_RS08470 PF04079 Segregation and condensation complex subunit ScpB NW98_RS08475 PF03466 LysR substrate binding domain NW98_RS08475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS08540 PF06804 NlpB/DapX lipoprotein NW98_RS08575 PF00216 Bacterial DNA-binding protein NW98_RS08580 PF03147 Ferredoxin-fold anticodon binding domain NW98_RS08580 PF03483 B3/4 domain NW98_RS08580 PF01588 Putative tRNA binding domain NW98_RS08580 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NW98_RS08580 PF03484 tRNA synthetase B5 domain NW98_RS08585 PF01409 tRNA synthetases class II core domain (F) NW98_RS08585 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NW98_RS08590 PF00453 Ribosomal protein L20 NW98_RS08595 PF01632 Ribosomal protein L35 NW98_RS08600 PF00707 Translation initiation factor IF-3, C-terminal domain NW98_RS08600 PF05198 Translation initiation factor IF-3, N-terminal domain NW98_RS08605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NW98_RS08605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NW98_RS08605 PF03129 Anticodon binding domain NW98_RS08605 PF02824 TGS domain NW98_RS08615 PF13291 ACT domain NW98_RS08615 PF04607 Region found in RelA / SpoT proteins NW98_RS08615 PF02824 TGS domain NW98_RS08620 PF01042 Endoribonuclease L-PSP NW98_RS08625 PF12146 Serine aminopeptidase, S33 NW98_RS08635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS08635 PF03466 LysR substrate binding domain NW98_RS08660 PF01144 Coenzyme A transferase NW98_RS08665 PF01144 Coenzyme A transferase NW98_RS08740 PF03621 MbtH-like protein NW98_RS08765 PF13609 Gram-negative porin NW98_RS08775 PF12852 Cupin NW98_RS08775 PF12833 Helix-turn-helix domain NW98_RS08785 PF01584 CheW-like domain NW98_RS08790 PF02203 Tar ligand binding domain homologue NW98_RS08790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS08790 PF00672 HAMP domain NW98_RS08810 PF13193 AMP-binding enzyme C-terminal domain NW98_RS08810 PF00501 AMP-binding enzyme NW98_RS08815 PF07690 Major Facilitator Superfamily NW98_RS08825 PF13649 Methyltransferase domain NW98_RS08835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NW98_RS08840 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS08845 PF00005 ABC transporter NW98_RS08850 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS08865 PF13520 Amino acid permease NW98_RS08875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NW98_RS08875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NW98_RS08880 PF00696 Amino acid kinase family NW98_RS08890 PF00561 alpha/beta hydrolase fold NW98_RS08890 PF00106 short chain dehydrogenase NW98_RS08895 PF03928 Haem-degrading NW98_RS08900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS08900 PF03466 LysR substrate binding domain NW98_RS08910 PF00043 Glutathione S-transferase, C-terminal domain NW98_RS08910 PF02798 Glutathione S-transferase, N-terminal domain NW98_RS08920 PF13458 Periplasmic binding protein NW98_RS08925 PF01047 MarR family NW98_RS08935 PF02638 Glycosyl hydrolase-like 10 NW98_RS08940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NW98_RS08950 PF02571 Precorrin-6x reductase CbiJ/CobK NW98_RS08960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NW98_RS08965 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NW98_RS08965 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NW98_RS08970 PF02570 Precorrin-8X methylmutase NW98_RS08975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NW98_RS08980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NW98_RS08985 PF02839 Carbohydrate binding domain NW98_RS09005 PF02230 Phospholipase/Carboxylesterase NW98_RS09020 PF07728 AAA domain (dynein-related subfamily) NW98_RS09020 PF17863 AAA lid domain NW98_RS09020 PF13519 von Willebrand factor type A domain NW98_RS09030 PF02514 CobN/Magnesium Chelatase NW98_RS09035 PF02492 CobW/HypB/UreG, nucleotide-binding domain NW98_RS09035 PF07683 Cobalamin synthesis protein cobW C-terminal domain NW98_RS09045 PF01890 Cobalamin synthesis G C-terminus NW98_RS09050 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP NW98_RS09050 PF12557 Cob(I)alamin adenosyltransferase N terminal NW98_RS09055 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NW98_RS09055 PF07685 CobB/CobQ-like glutamine amidotransferase domain NW98_RS09065 PF00551 Formyl transferase NW98_RS09070 PF07715 TonB-dependent Receptor Plug Domain NW98_RS09070 PF00593 TonB dependent receptor NW98_RS09075 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) NW98_RS09080 PF00668 Condensation domain NW98_RS09080 PF00550 Phosphopantetheine attachment site NW98_RS09080 PF13193 AMP-binding enzyme C-terminal domain NW98_RS09080 PF00501 AMP-binding enzyme NW98_RS09085 PF00501 AMP-binding enzyme NW98_RS09085 PF13193 AMP-binding enzyme C-terminal domain NW98_RS09085 PF00668 Condensation domain NW98_RS09085 PF00550 Phosphopantetheine attachment site NW98_RS09095 PF00664 ABC transporter transmembrane region NW98_RS09095 PF00005 ABC transporter NW98_RS09115 PF01497 Periplasmic binding protein NW98_RS09125 PF01032 FecCD transport family NW98_RS09130 PF00005 ABC transporter NW98_RS09135 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NW98_RS09140 PF03621 MbtH-like protein NW98_RS09160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NW98_RS09160 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NW98_RS09165 PF00107 Zinc-binding dehydrogenase NW98_RS09165 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS09175 PF02653 Branched-chain amino acid transport system / permease component NW98_RS09180 PF00005 ABC transporter NW98_RS09185 PF13407 Periplasmic binding protein domain NW98_RS09225 PF08021 Siderophore-interacting FAD-binding domain NW98_RS09225 PF04954 Siderophore-interacting protein NW98_RS09225 PF00005 ABC transporter NW98_RS09225 PF00664 ABC transporter transmembrane region NW98_RS09235 PF02753 Pili assembly chaperone PapD, C-terminal domain NW98_RS09235 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain NW98_RS09240 PF00873 AcrB/AcrD/AcrF family NW98_RS09245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS09245 PF00529 HlyD membrane-fusion protein of T1SS NW98_RS09250 PF00440 Bacterial regulatory proteins, tetR family NW98_RS09250 PF08361 MAATS-type transcriptional repressor, C-terminal region NW98_RS09260 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS09280 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS09310 PF00437 Type II/IV secretion system protein NW98_RS09325 PF00263 Bacterial type II and III secretion system protein NW98_RS09325 PF13629 Pilus formation protein N terminal region NW98_RS09325 PF04972 BON domain NW98_RS09350 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS09355 PF00005 ABC transporter NW98_RS09370 PF00083 Sugar (and other) transporter NW98_RS09380 PF04293 SpoVR like protein NW98_RS09385 PF04285 Protein of unknown function (DUF444) NW98_RS09390 PF06798 PrkA serine protein kinase C-terminal domain NW98_RS09390 PF08298 PrkA AAA domain NW98_RS09405 PF03466 LysR substrate binding domain NW98_RS09405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS09410 PF12857 TOBE-like domain NW98_RS09410 PF00005 ABC transporter NW98_RS09415 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS09420 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS09435 PF00717 Peptidase S24-like NW98_RS09435 PF01726 LexA DNA binding domain NW98_RS09460 PF00005 ABC transporter NW98_RS09465 PF01061 ABC-2 type transporter NW98_RS09475 PF03773 Predicted permease NW98_RS09480 PF00248 Aldo/keto reductase family NW98_RS09490 PF01638 HxlR-like helix-turn-helix NW98_RS09510 PF00375 Sodium:dicarboxylate symporter family NW98_RS09520 PF01207 Dihydrouridine synthase (Dus) NW98_RS09565 PF03459 TOBE domain NW98_RS09570 PF00005 ABC transporter NW98_RS09575 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS09580 PF00296 Luciferase-like monooxygenase NW98_RS09595 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS09600 PF00893 Small Multidrug Resistance protein NW98_RS09605 PF03928 Haem-degrading NW98_RS09620 PF00293 NUDIX domain NW98_RS09620 PF09297 NADH pyrophosphatase zinc ribbon domain NW98_RS09625 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NW98_RS09630 PF04377 Arginine-tRNA-protein transferase, C terminus NW98_RS09630 PF04376 Arginine-tRNA-protein transferase, N terminus NW98_RS09635 PF01180 Dihydroorotate dehydrogenase NW98_RS09640 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS09645 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS09655 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NW98_RS09655 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NW98_RS09660 PF00392 Bacterial regulatory proteins, gntR family NW98_RS09660 PF07729 FCD domain NW98_RS09665 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NW98_RS09670 PF01510 N-acetylmuramoyl-L-alanine amidase NW98_RS09680 PF00588 SpoU rRNA Methylase family NW98_RS09680 PF08032 RNA 2'-O ribose methyltransferase substrate binding NW98_RS09685 PF17876 Cold shock domain NW98_RS09685 PF00575 S1 RNA binding domain NW98_RS09685 PF08461 Ribonuclease R winged-helix domain NW98_RS09685 PF08206 Ribonuclease B OB domain NW98_RS09685 PF00773 RNB domain NW98_RS09705 PF02203 Tar ligand binding domain homologue NW98_RS09705 PF00672 HAMP domain NW98_RS09705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS09710 PF04185 Phosphoesterase family NW98_RS09725 PF00916 Sulfate permease family NW98_RS09725 PF01740 STAS domain NW98_RS09735 PF03352 Methyladenine glycosylase NW98_RS09735 PF13673 Acetyltransferase (GNAT) domain NW98_RS09735 PF13302 Acetyltransferase (GNAT) domain NW98_RS09735 PF00117 Glutamine amidotransferase class-I NW98_RS09735 PF00958 GMP synthase C terminal domain NW98_RS09745 PF07690 Major Facilitator Superfamily NW98_RS09750 PF00440 Bacterial regulatory proteins, tetR family NW98_RS09755 PF13193 AMP-binding enzyme C-terminal domain NW98_RS09755 PF00501 AMP-binding enzyme NW98_RS09775 PF17209 Hfq protein NW98_RS09785 PF00072 Response regulator receiver domain NW98_RS09785 PF02954 Bacterial regulatory protein, Fis family NW98_RS09785 PF00158 Sigma-54 interaction domain NW98_RS09825 PF04972 BON domain NW98_RS09825 PF00263 Bacterial type II and III secretion system protein NW98_RS09825 PF13629 Pilus formation protein N terminal region NW98_RS09865 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS09870 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS09875 PF08402 TOBE domain NW98_RS09875 PF00005 ABC transporter NW98_RS09880 PF13416 Bacterial extracellular solute-binding protein NW98_RS09885 PF01566 Natural resistance-associated macrophage protein NW98_RS09900 PF03922 OmpW family NW98_RS09905 PF03060 Nitronate monooxygenase NW98_RS09910 PF00171 Aldehyde dehydrogenase family NW98_RS09925 PF00005 ABC transporter NW98_RS09925 PF12848 ABC transporter NW98_RS09935 PF05170 AsmA family NW98_RS09940 PF00005 ABC transporter NW98_RS09945 PF03649 Uncharacterised protein family (UPF0014) NW98_RS09970 PF01053 Cys/Met metabolism PLP-dependent enzyme NW98_RS09980 PF02803 Thiolase, C-terminal domain NW98_RS09980 PF00108 Thiolase, N-terminal domain NW98_RS09985 PF00294 pfkB family carbohydrate kinase NW98_RS09990 PF18693 TRAM domain NW98_RS09990 PF04055 Radical SAM superfamily NW98_RS09990 PF00919 Uncharacterized protein family UPF0004 NW98_RS10000 PF05233 PHB accumulation regulatory domain NW98_RS10000 PF07879 PHB/PHA accumulation regulator DNA-binding domain NW98_RS10005 PF00106 short chain dehydrogenase NW98_RS10010 PF00108 Thiolase, N-terminal domain NW98_RS10010 PF02803 Thiolase, C-terminal domain NW98_RS10015 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NW98_RS10020 PF02578 Multi-copper polyphenol oxidoreductase laccase NW98_RS10025 PF01479 S4 domain NW98_RS10025 PF00849 RNA pseudouridylate synthase NW98_RS10030 PF13525 Outer membrane lipoprotein NW98_RS10035 PF04851 Type III restriction enzyme, res subunit NW98_RS10035 PF13307 Helicase C-terminal domain NW98_RS10050 PF17674 HHH domain NW98_RS10050 PF00575 S1 RNA binding domain NW98_RS10050 PF09371 Tex-like protein N-terminal domain NW98_RS10050 PF16921 Tex protein YqgF-like domain NW98_RS10060 PF02705 K+ potassium transporter NW98_RS10070 PF00156 Phosphoribosyl transferase domain NW98_RS10075 PF00709 Adenylosuccinate synthetase NW98_RS10080 PF13393 Histidyl-tRNA synthetase NW98_RS10090 PF01145 SPFH domain / Band 7 family NW98_RS10095 PF12221 Bacterial membrane protein N terminal NW98_RS10095 PF01145 SPFH domain / Band 7 family NW98_RS10100 PF01926 50S ribosome-binding GTPase NW98_RS10100 PF16360 GTP-binding GTPase Middle Region NW98_RS10100 PF13167 GTP-binding GTPase N-terminal NW98_RS10105 PF17209 Hfq protein NW98_RS10110 PF01926 50S ribosome-binding GTPase NW98_RS10110 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NW98_RS10115 PF13360 PQQ-like domain NW98_RS10120 PF09976 Tetratricopeptide repeat-like domain NW98_RS10125 PF03129 Anticodon binding domain NW98_RS10125 PF13393 Histidyl-tRNA synthetase NW98_RS10130 PF04551 GcpE protein NW98_RS10140 PF04055 Radical SAM superfamily NW98_RS10145 PF00334 Nucleoside diphosphate kinase NW98_RS10150 PF01027 Inhibitor of apoptosis-promoting Bax1 NW98_RS10155 PF05958 tRNA (Uracil-5-)-methyltransferase NW98_RS10175 PF00140 Sigma-70 factor, region 1.2 NW98_RS10175 PF04542 Sigma-70 region 2 NW98_RS10175 PF04539 Sigma-70 region 3 NW98_RS10175 PF04545 Sigma-70, region 4 NW98_RS10180 PF01476 LysM domain NW98_RS10180 PF01551 Peptidase family M23 NW98_RS10190 PF01975 Survival protein SurE NW98_RS10195 PF02515 CoA-transferase family III NW98_RS10200 PF02132 RecR protein NW98_RS10200 PF13662 Toprim domain NW98_RS10205 PF02575 YbaB/EbfC DNA-binding family NW98_RS10210 PF12169 DNA polymerase III subunits gamma and tau domain III NW98_RS10210 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NW98_RS10210 PF12170 DNA polymerase III tau subunit V interacting with alpha NW98_RS10220 PF00085 Thioredoxin NW98_RS10230 PF07498 Rho termination factor, N-terminal domain NW98_RS10230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW98_RS10230 PF07497 Rho termination factor, RNA-binding domain NW98_RS10235 PF13411 MerR HTH family regulatory protein NW98_RS10240 PF07690 Major Facilitator Superfamily NW98_RS10245 PF06167 Glucose-regulated metallo-peptidase M90 NW98_RS10250 PF01197 Ribosomal protein L31 NW98_RS10265 PF01554 MatE NW98_RS10295 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS10295 PF07724 AAA domain (Cdc48 subfamily) NW98_RS10295 PF17871 AAA lid domain NW98_RS10295 PF02861 Clp amino terminal domain, pathogenicity island component NW98_RS10295 PF10431 C-terminal, D2-small domain, of ClpB protein NW98_RS10300 PF02082 Transcriptional regulator NW98_RS10305 PF01152 Bacterial-like globin NW98_RS10310 PF02391 MoaE protein NW98_RS10315 PF02597 ThiS family NW98_RS10320 PF00994 Probable molybdopterin binding domain NW98_RS10320 PF03454 MoeA C-terminal region (domain IV) NW98_RS10320 PF03453 MoeA N-terminal region (domain I and II) NW98_RS10330 PF14821 Threonine synthase N terminus NW98_RS10330 PF00291 Pyridoxal-phosphate dependent enzyme NW98_RS10335 PF00742 Homoserine dehydrogenase NW98_RS10335 PF01842 ACT domain NW98_RS10335 PF03447 Homoserine dehydrogenase, NAD binding domain NW98_RS10350 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase NW98_RS10360 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NW98_RS10365 PF00535 Glycosyl transferase family 2 NW98_RS10370 PF00551 Formyl transferase NW98_RS10370 PF02911 Formyl transferase, C-terminal domain NW98_RS10370 PF01370 NAD dependent epimerase/dehydratase family NW98_RS10375 PF02911 Formyl transferase, C-terminal domain NW98_RS10375 PF00551 Formyl transferase NW98_RS10375 PF01370 NAD dependent epimerase/dehydratase family NW98_RS10380 PF01522 Polysaccharide deacetylase NW98_RS10385 PF00578 AhpC/TSA family NW98_RS10395 PF13638 PIN domain NW98_RS10395 PF02562 PhoH-like protein NW98_RS10400 PF00877 NlpC/P60 family NW98_RS10410 PF01384 Phosphate transporter family NW98_RS10420 PF03796 DnaB-like helicase C terminal domain NW98_RS10420 PF00772 DnaB-like helicase N terminal domain NW98_RS10430 PF03948 Ribosomal protein L9, C-terminal domain NW98_RS10430 PF01281 Ribosomal protein L9, N-terminal domain NW98_RS10435 PF01084 Ribosomal protein S18 NW98_RS10445 PF01250 Ribosomal protein S6 NW98_RS10455 PF04542 Sigma-70 region 2 NW98_RS10455 PF08281 Sigma-70, region 4 NW98_RS10485 PF00710 Asparaginase, N-terminal NW98_RS10485 PF17763 Glutaminase/Asparaginase C-terminal domain NW98_RS10515 PF13439 Glycosyltransferase Family 4 NW98_RS10515 PF00534 Glycosyl transferases group 1 NW98_RS10525 PF02463 RecF/RecN/SMC N terminal domain NW98_RS10545 PF01026 TatD related DNase NW98_RS10550 PF00583 Acetyltransferase (GNAT) family NW98_RS10555 PF09115 DNA polymerase III, delta subunit, C terminal NW98_RS10560 PF02223 Thymidylate kinase NW98_RS10565 PF02618 YceG-like family NW98_RS10570 PF01571 Aminomethyltransferase folate-binding domain NW98_RS10580 PF13673 Acetyltransferase (GNAT) domain NW98_RS10585 PF07859 alpha/beta hydrolase fold NW98_RS10590 PF16884 N-terminal domain of oxidoreductase NW98_RS10590 PF00107 Zinc-binding dehydrogenase NW98_RS10625 PF00108 Thiolase, N-terminal domain NW98_RS10625 PF02803 Thiolase, C-terminal domain NW98_RS10630 PF00857 Isochorismatase family NW98_RS10635 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS10635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NW98_RS10635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NW98_RS10645 PF13193 AMP-binding enzyme C-terminal domain NW98_RS10645 PF00501 AMP-binding enzyme NW98_RS10650 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NW98_RS10655 PF01641 SelR domain NW98_RS10660 PF04279 Intracellular septation protein A NW98_RS10665 PF01722 BolA-like protein NW98_RS10680 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NW98_RS10680 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NW98_RS10680 PF02769 AIR synthase related protein, C-terminal domain NW98_RS10690 PF01266 FAD dependent oxidoreductase NW98_RS10695 PF01256 Carbohydrate kinase NW98_RS10700 PF00342 Phosphoglucose isomerase NW98_RS10710 PF00005 ABC transporter NW98_RS10715 PF13472 GDSL-like Lipase/Acylhydrolase family NW98_RS10785 PF05362 Lon protease (S16) C-terminal proteolytic domain NW98_RS10785 PF02190 ATP-dependent protease La (LON) substrate-binding domain NW98_RS10785 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS10790 PF07724 AAA domain (Cdc48 subfamily) NW98_RS10790 PF06689 ClpX C4-type zinc finger NW98_RS10790 PF10431 C-terminal, D2-small domain, of ClpB protein NW98_RS10795 PF00574 Clp protease NW98_RS10800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NW98_RS10800 PF05698 Bacterial trigger factor protein (TF) C-terminus NW98_RS10800 PF05697 Bacterial trigger factor protein (TF) NW98_RS10815 PF02595 Glycerate kinase family NW98_RS10820 PF01047 MarR family NW98_RS10830 PF02558 Ketopantoate reductase PanE/ApbA NW98_RS10830 PF08546 Ketopantoate reductase PanE/ApbA C terminal NW98_RS10845 PF00267 Gram-negative porin NW98_RS10855 PF00850 Histone deacetylase domain NW98_RS10910 PF00486 Transcriptional regulatory protein, C terminal NW98_RS10910 PF00072 Response regulator receiver domain NW98_RS10915 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS10915 PF00672 HAMP domain NW98_RS10915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS10920 PF00578 AhpC/TSA family NW98_RS10925 PF02627 Carboxymuconolactone decarboxylase family NW98_RS10930 PF02542 YgbB family NW98_RS10935 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NW98_RS10940 PF00271 Helicase conserved C-terminal domain NW98_RS10940 PF03461 TRCF domain NW98_RS10940 PF02559 CarD-like/TRCF domain NW98_RS10940 PF17757 UvrB interaction domain NW98_RS10940 PF00270 DEAD/DEAH box helicase NW98_RS10960 PF01546 Peptidase family M20/M25/M40 NW98_RS10960 PF07687 Peptidase dimerisation domain NW98_RS10965 PF00291 Pyridoxal-phosphate dependent enzyme NW98_RS10990 PF00912 Transglycosylase NW98_RS10990 PF17092 Penicillin-binding protein OB-like domain NW98_RS10990 PF00905 Penicillin binding protein transpeptidase domain NW98_RS11010 PF01741 Large-conductance mechanosensitive channel, MscL NW98_RS11025 PF04115 Ureidoglycolate lyase NW98_RS11030 PF03561 Allantoicase repeat NW98_RS11035 PF09349 OHCU decarboxylase NW98_RS11035 PF01014 Uricase NW98_RS11045 PF01177 Asp/Glu/Hydantoin racemase NW98_RS11050 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NW98_RS11055 PF07729 FCD domain NW98_RS11055 PF00392 Bacterial regulatory proteins, gntR family NW98_RS11060 PF01610 Transposase NW98_RS11060 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS11060 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS11070 PF17676 LD-carboxypeptidase C-terminal domain NW98_RS11070 PF02016 LD-carboxypeptidase N-terminal domain NW98_RS11075 PF14437 MafB19-like deaminase NW98_RS11080 PF09350 Domain of unknown function (DUF1992) NW98_RS11130 PF02540 NAD synthase NW98_RS11130 PF00117 Glutamine amidotransferase class-I NW98_RS11130 PF00958 GMP synthase C terminal domain NW98_RS11140 PF00571 CBS domain NW98_RS11140 PF00478 IMP dehydrogenase / GMP reductase domain NW98_RS11165 PF00892 EamA-like transporter family NW98_RS11170 PF03658 RnfH family Ubiquitin NW98_RS11175 PF03364 Polyketide cyclase / dehydrase and lipid transport NW98_RS11180 PF01668 SmpB protein NW98_RS11185 PF01145 SPFH domain / Band 7 family NW98_RS11185 PF16200 C-terminal region of band_7 NW98_RS11215 PF09286 Pro-kumamolisin, activation domain NW98_RS11215 PF00082 Subtilase family NW98_RS11225 PF03618 Kinase/pyrophosphorylase NW98_RS11235 PF00588 SpoU rRNA Methylase family NW98_RS11235 PF08032 RNA 2'-O ribose methyltransferase substrate binding NW98_RS11240 PF01351 Ribonuclease HII NW98_RS11245 PF02684 Lipid-A-disaccharide synthetase NW98_RS11250 PF00132 Bacterial transferase hexapeptide (six repeats) NW98_RS11250 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NW98_RS11255 PF07977 FabA-like domain NW98_RS11260 PF00132 Bacterial transferase hexapeptide (six repeats) NW98_RS11260 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NW98_RS11270 PF01103 Surface antigen NW98_RS11270 PF07244 Surface antigen variable number repeat NW98_RS11275 PF02163 Peptidase family M50 NW98_RS11275 PF17820 PDZ domain NW98_RS11280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NW98_RS11280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NW98_RS11280 PF13288 DXP reductoisomerase C-terminal domain NW98_RS11290 PF01255 Putative undecaprenyl diphosphate synthase NW98_RS11295 PF01765 Ribosome recycling factor NW98_RS11300 PF00696 Amino acid kinase family NW98_RS11305 PF00889 Elongation factor TS NW98_RS11310 PF00318 Ribosomal protein S2 NW98_RS11320 PF00557 Metallopeptidase family M24 NW98_RS11325 PF01966 HD domain NW98_RS11325 PF08335 GlnD PII-uridylyltransferase NW98_RS11325 PF01909 Nucleotidyltransferase domain NW98_RS11330 PF01479 S4 domain NW98_RS11330 PF00849 RNA pseudouridylate synthase NW98_RS11335 PF01327 Polypeptide deformylase NW98_RS11340 PF01653 NAD-dependent DNA ligase adenylation domain NW98_RS11340 PF00533 BRCA1 C Terminus (BRCT) domain NW98_RS11340 PF03120 NAD-dependent DNA ligase OB-fold domain NW98_RS11340 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NW98_RS11340 PF12826 Helix-hairpin-helix motif NW98_RS11355 PF02463 RecF/RecN/SMC N terminal domain NW98_RS11355 PF06470 SMC proteins Flexible Hinge Domain NW98_RS11370 PF00155 Aminotransferase class I and II NW98_RS11375 PF00132 Bacterial transferase hexapeptide (six repeats) NW98_RS11375 PF14602 Hexapeptide repeat of succinyl-transferase NW98_RS11375 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NW98_RS11380 PF03960 ArsC family NW98_RS11385 PF01546 Peptidase family M20/M25/M40 NW98_RS11385 PF07687 Peptidase dimerisation domain NW98_RS11390 PF05175 Methyltransferase small domain NW98_RS11400 PF13091 PLD-like domain NW98_RS11405 PF00255 Glutathione peroxidase NW98_RS11410 PF00005 ABC transporter NW98_RS11410 PF12848 ABC transporter NW98_RS11420 PF18073 Rubredoxin metal binding domain NW98_RS11425 PF01168 Alanine racemase, N-terminal domain NW98_RS11425 PF00842 Alanine racemase, C-terminal domain NW98_RS11430 PF07690 Major Facilitator Superfamily NW98_RS11435 PF08543 Phosphomethylpyrimidine kinase NW98_RS11450 PF03167 Uracil DNA glycosylase superfamily NW98_RS11460 PF00814 Glycoprotease family NW98_RS11470 PF00271 Helicase conserved C-terminal domain NW98_RS11470 PF00270 DEAD/DEAH box helicase NW98_RS11480 PF00463 Isocitrate lyase family NW98_RS11485 PF00582 Universal stress protein family NW98_RS11490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS11490 PF03466 LysR substrate binding domain NW98_RS11495 PF13419 Haloacid dehalogenase-like hydrolase NW98_RS11500 PF01274 Malate synthase NW98_RS11515 PF03737 Aldolase/RraA NW98_RS11520 PF02311 AraC-like ligand binding domain NW98_RS11520 PF12833 Helix-turn-helix domain NW98_RS11550 PF00749 tRNA synthetases class I (E and Q), catalytic domain NW98_RS11555 PF01734 Patatin-like phospholipase NW98_RS11560 PF00877 NlpC/P60 family NW98_RS11570 PF00005 ABC transporter NW98_RS11570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW98_RS11575 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS11575 PF12911 N-terminal TM domain of oligopeptide transport permease C NW98_RS11580 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS11585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW98_RS11610 PF00384 Molybdopterin oxidoreductase NW98_RS11610 PF01568 Molydopterin dinucleotide binding domain NW98_RS11610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NW98_RS11625 PF00037 4Fe-4S binding domain NW98_RS11625 PF11953 Domain of unknown function (DUF3470) NW98_RS11640 PF00557 Metallopeptidase family M24 NW98_RS11655 PF02655 ATP-grasp domain NW98_RS11655 PF00206 Lyase NW98_RS11660 PF00291 Pyridoxal-phosphate dependent enzyme NW98_RS11665 PF00009 Elongation factor Tu GTP binding domain NW98_RS11670 PF01507 Phosphoadenosine phosphosulfate reductase family NW98_RS11680 PF00266 Aminotransferase class-V NW98_RS11685 PF01757 Acyltransferase family NW98_RS11695 PF02779 Transketolase, pyrimidine binding domain NW98_RS11695 PF02780 Transketolase, C-terminal domain NW98_RS11700 PF00456 Transketolase, thiamine diphosphate binding domain NW98_RS11700 PF02780 Transketolase, C-terminal domain NW98_RS11700 PF02779 Transketolase, pyrimidine binding domain NW98_RS11720 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NW98_RS11730 PF00501 AMP-binding enzyme NW98_RS11730 PF13193 AMP-binding enzyme C-terminal domain NW98_RS11730 PF00668 Condensation domain NW98_RS11730 PF00550 Phosphopantetheine attachment site NW98_RS11735 PF13193 AMP-binding enzyme C-terminal domain NW98_RS11735 PF00501 AMP-binding enzyme NW98_RS11735 PF00550 Phosphopantetheine attachment site NW98_RS11735 PF00668 Condensation domain NW98_RS11750 PF13193 AMP-binding enzyme C-terminal domain NW98_RS11750 PF00501 AMP-binding enzyme NW98_RS11750 PF00668 Condensation domain NW98_RS11750 PF00550 Phosphopantetheine attachment site NW98_RS11750 PF00975 Thioesterase domain NW98_RS11755 PF00009 Elongation factor Tu GTP binding domain NW98_RS11775 PF13533 Biotin-lipoyl like NW98_RS11780 PF00873 AcrB/AcrD/AcrF family NW98_RS11820 PF13840 ACT domain NW98_RS11820 PF01842 ACT domain NW98_RS11820 PF00696 Amino acid kinase family NW98_RS11830 PF01171 PP-loop family NW98_RS11830 PF11734 TilS substrate C-terminal domain NW98_RS11830 PF09179 TilS substrate binding domain NW98_RS11835 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NW98_RS11845 PF01406 tRNA synthetases class I (C) catalytic domain NW98_RS11845 PF09190 DALR domain NW98_RS11855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NW98_RS11860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NW98_RS11865 PF00149 Calcineurin-like phosphoesterase NW98_RS11875 PF00132 Bacterial transferase hexapeptide (six repeats) NW98_RS11880 PF00588 SpoU rRNA Methylase family NW98_RS11890 PF00459 Inositol monophosphatase family NW98_RS11915 PF00488 MutS domain V NW98_RS11915 PF01624 MutS domain I NW98_RS11915 PF05188 MutS domain II NW98_RS11915 PF05192 MutS domain III NW98_RS11915 PF05190 MutS family domain IV NW98_RS11930 PF08007 Cupin superfamily protein NW98_RS11945 PF10996 Beta-Casp domain NW98_RS11945 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NW98_RS11945 PF00753 Metallo-beta-lactamase superfamily NW98_RS11950 PF06804 NlpB/DapX lipoprotein NW98_RS11955 PF00701 Dihydrodipicolinate synthetase family NW98_RS11965 PF00579 tRNA synthetases class I (W and Y) NW98_RS11970 PF02163 Peptidase family M50 NW98_RS11975 PF01300 Telomere recombination NW98_RS11980 PF02811 PHP domain NW98_RS11990 PF00561 alpha/beta hydrolase fold NW98_RS12000 PF04305 Protein of unknown function (DUF455) NW98_RS12005 PF00132 Bacterial transferase hexapeptide (six repeats) NW98_RS12010 PF01430 Hsp33 protein NW98_RS12020 PF04977 Septum formation initiator NW98_RS12025 PF00113 Enolase, C-terminal TIM barrel domain NW98_RS12025 PF03952 Enolase, N-terminal domain NW98_RS12030 PF00793 DAHP synthetase I family NW98_RS12035 PF06418 CTP synthase N-terminus NW98_RS12035 PF00117 Glutamine amidotransferase class-I NW98_RS12050 PF03772 Competence protein NW98_RS12050 PF00753 Metallo-beta-lactamase superfamily NW98_RS12055 PF01026 TatD related DNase NW98_RS12060 PF00005 ABC transporter NW98_RS12065 PF12704 MacB-like periplasmic core domain NW98_RS12065 PF02687 FtsX-like permease family NW98_RS12080 PF02272 DHHA1 domain NW98_RS12080 PF17768 RecJ OB domain NW98_RS12080 PF01368 DHH family NW98_RS12090 PF01336 OB-fold nucleic acid binding domain NW98_RS12090 PF00152 tRNA synthetases class II (D, K and N) NW98_RS12105 PF04384 Iron-sulphur cluster assembly NW98_RS12110 PF00111 2Fe-2S iron-sulfur cluster binding domain NW98_RS12115 PF00012 Hsp70 protein NW98_RS12120 PF07743 HSCB C-terminal oligomerisation domain NW98_RS12125 PF01521 Iron-sulphur cluster biosynthesis NW98_RS12130 PF01592 NifU-like N terminal domain NW98_RS12135 PF00266 Aminotransferase class-V NW98_RS12140 PF02082 Transcriptional regulator NW98_RS12145 PF01451 Low molecular weight phosphotyrosine protein phosphatase NW98_RS12155 PF13183 4Fe-4S dicluster domain NW98_RS12155 PF11870 Domain of unknown function (DUF3390) NW98_RS12155 PF02589 LUD domain NW98_RS12160 PF02754 Cysteine-rich domain NW98_RS12170 PF09339 IclR helix-turn-helix domain NW98_RS12170 PF01614 Bacterial transcriptional regulator NW98_RS12180 PF09361 Phasin protein NW98_RS12200 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS12200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NW98_RS12210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NW98_RS12210 PF02817 e3 binding domain NW98_RS12210 PF00364 Biotin-requiring enzyme NW98_RS12215 PF17831 Pyruvate dehydrogenase E1 component middle domain NW98_RS12215 PF00456 Transketolase, thiamine diphosphate binding domain NW98_RS12220 PF00989 PAS fold NW98_RS12220 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS12225 PF00196 Bacterial regulatory proteins, luxR family NW98_RS12225 PF00072 Response regulator receiver domain NW98_RS12230 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NW98_RS12230 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NW98_RS12245 PF01432 Peptidase family M3 NW98_RS12250 PF11799 impB/mucB/samB family C-terminal domain NW98_RS12250 PF00817 impB/mucB/samB family NW98_RS12265 PF07690 Major Facilitator Superfamily NW98_RS12270 PF07690 Major Facilitator Superfamily NW98_RS12275 PF00384 Molybdopterin oxidoreductase NW98_RS12275 PF01568 Molydopterin dinucleotide binding domain NW98_RS12275 PF14710 Respiratory nitrate reductase alpha N-terminal NW98_RS12280 PF13247 4Fe-4S dicluster domain NW98_RS12280 PF14711 Respiratory nitrate reductase beta C-terminal NW98_RS12285 PF02613 Nitrate reductase delta subunit NW98_RS12290 PF02665 Nitrate reductase gamma subunit NW98_RS12295 PF07730 Histidine kinase NW98_RS12300 PF00196 Bacterial regulatory proteins, luxR family NW98_RS12300 PF00072 Response regulator receiver domain NW98_RS12315 PF00158 Sigma-54 interaction domain NW98_RS12315 PF00072 Response regulator receiver domain NW98_RS12315 PF02954 Bacterial regulatory protein, Fis family NW98_RS12320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS12320 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS12320 PF00989 PAS fold NW98_RS12325 PF00120 Glutamine synthetase, catalytic domain NW98_RS12325 PF03951 Glutamine synthetase, beta-Grasp domain NW98_RS12340 PF02464 Competence-damaged protein NW98_RS12340 PF18146 Damage-inducible protein CinA KH domain NW98_RS12340 PF00994 Probable molybdopterin binding domain NW98_RS12365 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NW98_RS12365 PF00271 Helicase conserved C-terminal domain NW98_RS12365 PF00270 DEAD/DEAH box helicase NW98_RS12365 PF11898 Domain of unknown function (DUF3418) NW98_RS12365 PF04408 Helicase associated domain (HA2) NW98_RS12370 PF00696 Amino acid kinase family NW98_RS12370 PF00583 Acetyltransferase (GNAT) family NW98_RS12375 PF04362 Bacterial Fe(2+) trafficking NW98_RS12380 PF07690 Major Facilitator Superfamily NW98_RS12380 PF00083 Sugar (and other) transporter NW98_RS12390 PF02515 CoA-transferase family III NW98_RS12395 PF18158 Adaptive response protein AidB N-terminal domain NW98_RS12395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS12395 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS12400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS12400 PF03466 LysR substrate binding domain NW98_RS12440 PF00768 D-alanyl-D-alanine carboxypeptidase NW98_RS12445 PF03974 Ecotin NW98_RS12480 PF01161 Phosphatidylethanolamine-binding protein NW98_RS12485 PF07690 Major Facilitator Superfamily NW98_RS12505 PF00982 Glycosyltransferase family 20 NW98_RS12535 PF00005 ABC transporter NW98_RS12540 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS12560 PF00672 HAMP domain NW98_RS12560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS12560 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS12565 PF00486 Transcriptional regulatory protein, C terminal NW98_RS12565 PF00072 Response regulator receiver domain NW98_RS12585 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS12590 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS12595 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS12600 PF00005 ABC transporter NW98_RS12605 PF13609 Gram-negative porin NW98_RS12610 PF00543 Nitrogen regulatory protein P-II NW98_RS12615 PF00795 Carbon-nitrogen hydrolase NW98_RS12615 PF02540 NAD synthase NW98_RS12640 PF01541 GIY-YIG catalytic domain NW98_RS12645 PF00719 Inorganic pyrophosphatase NW98_RS12650 PF00171 Aldehyde dehydrogenase family NW98_RS12660 PF07690 Major Facilitator Superfamily NW98_RS12670 PF02602 Uroporphyrinogen-III synthase HemD NW98_RS12675 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NW98_RS12675 PF03900 Porphobilinogen deaminase, C-terminal domain NW98_RS12685 PF00311 Phosphoenolpyruvate carboxylase NW98_RS12700 PF08241 Methyltransferase domain NW98_RS12735 PF14698 Argininosuccinate lyase C-terminal NW98_RS12735 PF00206 Lyase NW98_RS12740 PF13419 Haloacid dehalogenase-like hydrolase NW98_RS12750 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain NW98_RS12750 PF01276 Orn/Lys/Arg decarboxylase, major domain NW98_RS12750 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain NW98_RS12755 PF00692 dUTPase NW98_RS12765 PF10609 NUBPL iron-transfer P-loop NTPase NW98_RS12775 PF00691 OmpA family NW98_RS12775 PF05736 OprF membrane domain NW98_RS12785 PF09334 tRNA synthetases class I (M) NW98_RS12785 PF01588 Putative tRNA binding domain NW98_RS12790 PF16864 Dimerisation domain NW98_RS12790 PF00891 O-methyltransferase domain NW98_RS12805 PF04357 TamB, inner membrane protein subunit of TAM complex NW98_RS12810 PF17243 POTRA domain TamA domain 1 NW98_RS12810 PF01103 Surface antigen NW98_RS12810 PF07244 Surface antigen variable number repeat NW98_RS12820 PF02616 Segregation and condensation protein ScpA NW98_RS12830 PF02569 Pantoate-beta-alanine ligase NW98_RS12835 PF02261 Aspartate decarboxylase NW98_RS12840 PF10609 NUBPL iron-transfer P-loop NTPase NW98_RS12845 PF07681 DoxX NW98_RS12850 PF07685 CobB/CobQ-like glutamine amidotransferase domain NW98_RS12850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NW98_RS12855 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase NW98_RS12860 PF17113 Regulatory signalling modulator protein AmpE NW98_RS12860 PF03186 CobD/Cbib protein NW98_RS12865 PF00155 Aminotransferase class I and II NW98_RS12870 PF01497 Periplasmic binding protein NW98_RS12890 PF02654 Cobalamin-5-phosphate synthase NW98_RS12895 PF02277 Phosphoribosyltransferase NW98_RS12900 PF00005 ABC transporter NW98_RS12905 PF01032 FecCD transport family NW98_RS12910 PF00593 TonB dependent receptor NW98_RS12910 PF07715 TonB-dependent Receptor Plug Domain NW98_RS12920 PF05164 Cell division protein ZapA NW98_RS12940 PF01790 Prolipoprotein diacylglyceryl transferase NW98_RS12955 PF00920 Dehydratase family NW98_RS12965 PF00034 Cytochrome c NW98_RS12975 PF04364 DNA polymerase III chi subunit, HolC NW98_RS12980 PF00883 Cytosol aminopeptidase family, catalytic domain NW98_RS12980 PF02789 Cytosol aminopeptidase family, N-terminal domain NW98_RS12985 PF03739 Lipopolysaccharide export system permease LptF/LptG NW98_RS13000 PF14824 Sirohaem biosynthesis protein central NW98_RS13000 PF10414 Sirohaem synthase dimerisation region NW98_RS13000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NW98_RS13005 PF00009 Elongation factor Tu GTP binding domain NW98_RS13010 PF01507 Phosphoadenosine phosphosulfate reductase family NW98_RS13015 PF01507 Phosphoadenosine phosphosulfate reductase family NW98_RS13030 PF03466 LysR substrate binding domain NW98_RS13030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS13060 PF00120 Glutamine synthetase, catalytic domain NW98_RS13065 PF07722 Peptidase C26 NW98_RS13100 PF01979 Amidohydrolase family NW98_RS13105 PF01979 Amidohydrolase family NW98_RS13115 PF17391 Urocanase N-terminal domain NW98_RS13115 PF17392 Urocanase C-terminal domain NW98_RS13115 PF01175 Urocanase Rossmann-like domain NW98_RS13120 PF00392 Bacterial regulatory proteins, gntR family NW98_RS13120 PF07702 UTRA domain NW98_RS13125 PF00221 Aromatic amino acid lyase NW98_RS13150 PF00196 Bacterial regulatory proteins, luxR family NW98_RS13150 PF03472 Autoinducer binding domain NW98_RS13170 PF03441 FAD binding domain of DNA photolyase NW98_RS13170 PF00875 DNA photolyase NW98_RS13175 PF00487 Fatty acid desaturase NW98_RS13185 PF00115 Cytochrome C and Quinol oxidase polypeptide I NW98_RS13190 PF01883 Iron-sulfur cluster assembly protein NW98_RS13225 PF08859 DGC domain NW98_RS13230 PF02036 SCP-2 sterol transfer family NW98_RS13235 PF01136 Peptidase family U32 NW98_RS13240 PF01136 Peptidase family U32 NW98_RS13260 PF00027 Cyclic nucleotide-binding domain NW98_RS13260 PF00520 Ion transport protein NW98_RS13265 PF04055 Radical SAM superfamily NW98_RS13265 PF06969 HemN C-terminal domain NW98_RS13270 PF02203 Tar ligand binding domain homologue NW98_RS13270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS13270 PF00672 HAMP domain NW98_RS13295 PF00005 ABC transporter NW98_RS13305 PF00266 Aminotransferase class-V NW98_RS13310 PF01592 NifU-like N terminal domain NW98_RS13315 PF01883 Iron-sulfur cluster assembly protein NW98_RS13330 PF02082 Transcriptional regulator NW98_RS13345 PF06481 COX Aromatic Rich Motif NW98_RS13345 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NW98_RS13360 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NW98_RS13370 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS13380 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NW98_RS13385 PF04996 Succinylarginine dihydrolase NW98_RS13395 PF04958 Arginine N-succinyltransferase beta subunit NW98_RS13400 PF04958 Arginine N-succinyltransferase beta subunit NW98_RS13405 PF00202 Aminotransferase class-III NW98_RS13420 PF12833 Helix-turn-helix domain NW98_RS13425 PF00005 ABC transporter NW98_RS13430 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS13445 PF05506 Domain of unknown function (DUF756) NW98_RS13445 PF04185 Phosphoesterase family NW98_RS13455 PF08543 Phosphomethylpyrimidine kinase NW98_RS13465 PF00561 alpha/beta hydrolase fold NW98_RS13475 PF00296 Luciferase-like monooxygenase NW98_RS13490 PF04794 YdjC-like protein NW98_RS13520 PF13458 Periplasmic binding protein NW98_RS13525 PF01266 FAD dependent oxidoreductase NW98_RS13540 PF13439 Glycosyltransferase Family 4 NW98_RS13540 PF00534 Glycosyl transferases group 1 NW98_RS13545 PF00005 ABC transporter NW98_RS13545 PF00664 ABC transporter transmembrane region NW98_RS13550 PF00982 Glycosyltransferase family 20 NW98_RS13555 PF02358 Trehalose-phosphatase NW98_RS13565 PF02630 SCO1/SenC NW98_RS13580 PF13673 Acetyltransferase (GNAT) domain NW98_RS13590 PF02678 Pirin NW98_RS13590 PF05726 Pirin C-terminal cupin domain NW98_RS13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS13595 PF03466 LysR substrate binding domain NW98_RS13600 PF13185 GAF domain NW98_RS13620 PF01066 CDP-alcohol phosphatidyltransferase NW98_RS13625 PF01541 GIY-YIG catalytic domain NW98_RS13625 PF02151 UvrB/uvrC motif NW98_RS13625 PF08459 UvrC Helix-hairpin-helix N-terminal NW98_RS13635 PF09285 Elongation factor P, C-terminal NW98_RS13635 PF08207 Elongation factor P (EF-P) KOW-like domain NW98_RS13635 PF01132 Elongation factor P (EF-P) OB domain NW98_RS13640 PF02954 Bacterial regulatory protein, Fis family NW98_RS13640 PF00158 Sigma-54 interaction domain NW98_RS13640 PF00072 Response regulator receiver domain NW98_RS13645 PF00933 Glycosyl hydrolase family 3 N terminal domain NW98_RS13650 PF01648 4'-phosphopantetheinyl transferase superfamily NW98_RS13655 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NW98_RS13660 PF11967 Recombination protein O N terminal NW98_RS13660 PF02565 Recombination protein O C terminal NW98_RS13665 PF01926 50S ribosome-binding GTPase NW98_RS13665 PF07650 KH domain NW98_RS13670 PF00035 Double-stranded RNA binding motif NW98_RS13670 PF14622 Ribonuclease-III-like NW98_RS13675 PF10502 Signal peptidase, peptidase S26 NW98_RS13680 PF03144 Elongation factor Tu domain 2 NW98_RS13680 PF00009 Elongation factor Tu GTP binding domain NW98_RS13680 PF06421 GTP-binding protein LepA C-terminus NW98_RS13680 PF00679 Elongation factor G C-terminus NW98_RS13690 PF13180 PDZ domain NW98_RS13695 PF03888 MucB/RseB N-terminal domain NW98_RS13695 PF17188 MucB/RseB C-terminal domain NW98_RS13705 PF08281 Sigma-70, region 4 NW98_RS13705 PF04542 Sigma-70 region 2 NW98_RS13715 PF00109 Beta-ketoacyl synthase, N-terminal domain NW98_RS13715 PF02801 Beta-ketoacyl synthase, C-terminal domain NW98_RS13720 PF00550 Phosphopantetheine attachment site NW98_RS13730 PF00698 Acyl transferase domain NW98_RS13735 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NW98_RS13735 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NW98_RS13740 PF02504 Fatty acid synthesis protein NW98_RS13745 PF01783 Ribosomal L32p protein family NW98_RS13750 PF02620 Large ribosomal RNA subunit accumulation protein YceD NW98_RS13755 PF02545 Maf-like protein NW98_RS13760 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NW98_RS13765 PF01343 Peptidase family S49 NW98_RS13780 PF01479 S4 domain NW98_RS13780 PF00849 RNA pseudouridylate synthase NW98_RS13790 PF00575 S1 RNA binding domain NW98_RS13790 PF10150 Ribonuclease E/G family NW98_RS13790 PF12111 Polyribonucleotide phosphorylase C terminal NW98_RS13795 PF06463 Molybdenum Cofactor Synthesis C NW98_RS13795 PF04055 Radical SAM superfamily NW98_RS13800 PF12804 MobA-like NTP transferase domain NW98_RS13805 PF03453 MoeA N-terminal region (domain I and II) NW98_RS13805 PF03454 MoeA C-terminal region (domain IV) NW98_RS13805 PF00994 Probable molybdopterin binding domain NW98_RS13820 PF02646 RmuC family NW98_RS13825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NW98_RS13825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NW98_RS13840 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NW98_RS13840 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NW98_RS13850 PF11953 Domain of unknown function (DUF3470) NW98_RS13850 PF00037 4Fe-4S binding domain NW98_RS13865 PF05981 CreA protein NW98_RS13890 PF01554 MatE NW98_RS13910 PF00206 Lyase NW98_RS13910 PF10415 Fumarase C C-terminus NW98_RS13915 PF03061 Thioesterase superfamily NW98_RS13945 PF07732 Multicopper oxidase NW98_RS13945 PF07731 Multicopper oxidase NW98_RS13955 PF00180 Isocitrate/isopropylmalate dehydrogenase NW98_RS13960 PF00849 RNA pseudouridylate synthase NW98_RS14000 PF07715 TonB-dependent Receptor Plug Domain NW98_RS14000 PF00593 TonB dependent receptor NW98_RS14055 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS14055 PF01610 Transposase NW98_RS14055 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS14065 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NW98_RS14070 PF03466 LysR substrate binding domain NW98_RS14070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS14075 PF01717 Cobalamin-independent synthase, Catalytic domain NW98_RS14075 PF08267 Cobalamin-independent synthase, N-terminal domain NW98_RS14080 PF17432 Domain of unknown function (DUF3458_C) ARM repeats NW98_RS14080 PF11940 Domain of unknown function (DUF3458) Ig-like fold NW98_RS14080 PF01433 Peptidase family M1 domain NW98_RS14095 PF01169 Uncharacterized protein family UPF0016 NW98_RS14105 PF01979 Amidohydrolase family NW98_RS14110 PF00860 Permease family NW98_RS14115 PF00962 Adenosine/AMP deaminase NW98_RS14130 PF02600 Disulfide bond formation protein DsbB NW98_RS14135 PF01425 Amidase NW98_RS14145 PF07722 Peptidase C26 NW98_RS14155 PF07690 Major Facilitator Superfamily NW98_RS14170 PF01494 FAD binding domain NW98_RS14190 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NW98_RS14190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NW98_RS14190 PF00037 4Fe-4S binding domain NW98_RS14190 PF01568 Molydopterin dinucleotide binding domain NW98_RS14190 PF00384 Molybdopterin oxidoreductase NW98_RS14195 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NW98_RS14195 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NW98_RS14195 PF10531 SLBB domain NW98_RS14205 PF12727 PBP superfamily domain NW98_RS14205 PF12728 Helix-turn-helix domain NW98_RS14215 PF00398 Ribosomal RNA adenine dimethylase NW98_RS14240 PF13419 Haloacid dehalogenase-like hydrolase NW98_RS14250 PF00691 OmpA family NW98_RS14260 PF03989 DNA gyrase C-terminal domain, beta-propeller NW98_RS14260 PF00521 DNA gyrase/topoisomerase IV, subunit A NW98_RS14270 PF00266 Aminotransferase class-V NW98_RS14275 PF01817 Chorismate mutase type II NW98_RS14275 PF00800 Prephenate dehydratase NW98_RS14275 PF01842 ACT domain NW98_RS14280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NW98_RS14285 PF02224 Cytidylate kinase NW98_RS14290 PF00575 S1 RNA binding domain NW98_RS14295 PF00216 Bacterial DNA-binding protein NW98_RS14310 PF18073 Rubredoxin metal binding domain NW98_RS14315 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NW98_RS14315 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NW98_RS14315 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NW98_RS14320 PF00294 pfkB family carbohydrate kinase NW98_RS14325 PF01370 NAD dependent epimerase/dehydratase family NW98_RS14340 PF00291 Pyridoxal-phosphate dependent enzyme NW98_RS14345 PF13406 Transglycosylase SLT domain NW98_RS14350 PF00850 Histone deacetylase domain NW98_RS14360 PF12146 Serine aminopeptidase, S33 NW98_RS14365 PF09383 NIL domain NW98_RS14365 PF00005 ABC transporter NW98_RS14370 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS14375 PF03180 NLPA lipoprotein NW98_RS14380 PF01012 Electron transfer flavoprotein domain NW98_RS14385 PF00766 Electron transfer flavoprotein FAD-binding domain NW98_RS14385 PF01012 Electron transfer flavoprotein domain NW98_RS14395 PF01266 FAD dependent oxidoreductase NW98_RS14400 PF01037 Lrp/AsnC ligand binding domain NW98_RS14420 PF07995 Glucose / Sorbosone dehydrogenase NW98_RS14425 PF00886 Ribosomal protein S16 NW98_RS14430 PF01782 RimM N-terminal domain NW98_RS14430 PF05239 PRC-barrel domain NW98_RS14435 PF01746 tRNA (Guanine-1)-methyltransferase NW98_RS14440 PF01245 Ribosomal protein L19 NW98_RS14465 PF00293 NUDIX domain NW98_RS14470 PF03186 CobD/Cbib protein NW98_RS14470 PF17113 Regulatory signalling modulator protein AmpE NW98_RS14480 PF03193 RsgA GTPase NW98_RS14485 PF01435 Peptidase family M48 NW98_RS14490 PF00929 Exonuclease NW98_RS14495 PF00994 Probable molybdopterin binding domain NW98_RS14500 PF04751 Protein of unknown function (DUF615) NW98_RS14510 PF01523 Putative modulator of DNA gyrase NW98_RS14520 PF00186 Dihydrofolate reductase NW98_RS14525 PF00072 Response regulator receiver domain NW98_RS14525 PF02954 Bacterial regulatory protein, Fis family NW98_RS14525 PF00158 Sigma-54 interaction domain NW98_RS14545 PF02954 Bacterial regulatory protein, Fis family NW98_RS14545 PF00158 Sigma-54 interaction domain NW98_RS14545 PF00072 Response regulator receiver domain NW98_RS14550 PF00303 Thymidylate synthase NW98_RS14560 PF00106 short chain dehydrogenase NW98_RS14570 PF13369 Transglutaminase-like superfamily NW98_RS14575 PF03023 Lipid II flippase MurJ NW98_RS14585 PF01649 Ribosomal protein S20 NW98_RS14595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NW98_RS14595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NW98_RS14600 PF01565 FAD binding domain NW98_RS14600 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NW98_RS14605 PF04461 Protein of unknown function (DUF520) NW98_RS14610 PF02660 Glycerol-3-phosphate acyltransferase NW98_RS14615 PF04073 Aminoacyl-tRNA editing domain NW98_RS14620 PF00501 AMP-binding enzyme NW98_RS14620 PF13193 AMP-binding enzyme C-terminal domain NW98_RS14625 PF02899 Phage integrase, N-terminal SAM-like domain NW98_RS14625 PF00589 Phage integrase family NW98_RS14635 PF08331 Domain of unknown function (DUF1730) NW98_RS14640 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NW98_RS14645 PF11741 AMIN domain NW98_RS14645 PF01520 N-acetylmuramoyl-L-alanine amidase NW98_RS14655 PF00892 EamA-like transporter family NW98_RS14660 PF05726 Pirin C-terminal cupin domain NW98_RS14660 PF02678 Pirin NW98_RS14675 PF00899 ThiF family NW98_RS14680 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NW98_RS14680 PF01243 Pyridoxamine 5'-phosphate oxidase NW98_RS14700 PF01625 Peptide methionine sulfoxide reductase NW98_RS14710 PF01613 Flavin reductase like domain NW98_RS14715 PF01037 Lrp/AsnC ligand binding domain NW98_RS14720 PF04199 Putative cyclase NW98_RS14725 PF00266 Aminotransferase class-V NW98_RS14730 PF03301 Tryptophan 2,3-dioxygenase NW98_RS14735 PF07690 Major Facilitator Superfamily NW98_RS14745 PF02558 Ketopantoate reductase PanE/ApbA NW98_RS14745 PF08546 Ketopantoate reductase PanE/ApbA C terminal NW98_RS14750 PF00171 Aldehyde dehydrogenase family NW98_RS14755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW98_RS14755 PF00205 Thiamine pyrophosphate enzyme, central domain NW98_RS14755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW98_RS14760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS14760 PF03466 LysR substrate binding domain NW98_RS14765 PF08125 Mannitol dehydrogenase C-terminal domain NW98_RS14765 PF01232 Mannitol dehydrogenase Rossmann domain NW98_RS14770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NW98_RS14770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NW98_RS14775 PF04198 Putative sugar-binding domain NW98_RS14780 PF07690 Major Facilitator Superfamily NW98_RS14785 PF00144 Beta-lactamase NW98_RS14790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS14790 PF03466 LysR substrate binding domain NW98_RS14805 PF00005 ABC transporter NW98_RS14805 PF08402 TOBE domain NW98_RS14810 PF13419 Haloacid dehalogenase-like hydrolase NW98_RS14815 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS14820 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS14835 PF00294 pfkB family carbohydrate kinase NW98_RS14845 PF01475 Ferric uptake regulator family NW98_RS14855 PF00005 ABC transporter NW98_RS14860 PF00950 ABC 3 transport family NW98_RS14865 PF00756 Putative esterase NW98_RS14870 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS14870 PF00107 Zinc-binding dehydrogenase NW98_RS14875 PF01965 DJ-1/PfpI family NW98_RS14875 PF12833 Helix-turn-helix domain NW98_RS14885 PF00860 Permease family NW98_RS14900 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS14900 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS14900 PF01610 Transposase NW98_RS14910 PF02321 Outer membrane efflux protein NW98_RS14915 PF00873 AcrB/AcrD/AcrF family NW98_RS14920 PF00529 HlyD membrane-fusion protein of T1SS NW98_RS14920 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS14930 PF00440 Bacterial regulatory proteins, tetR family NW98_RS14930 PF08361 MAATS-type transcriptional repressor, C-terminal region NW98_RS14950 PF13180 PDZ domain NW98_RS14960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS14960 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS14965 PF00486 Transcriptional regulatory protein, C terminal NW98_RS14965 PF00072 Response regulator receiver domain NW98_RS14975 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family NW98_RS14995 PF01300 Telomere recombination NW98_RS14995 PF03481 Putative GTP-binding controlling metal-binding NW98_RS15000 PF02222 ATP-grasp domain NW98_RS15000 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NW98_RS15005 PF00731 AIR carboxylase NW98_RS15010 PF01259 SAICAR synthetase NW98_RS15015 PF01116 Fructose-bisphosphate aldolase class-II NW98_RS15020 PF02887 Pyruvate kinase, alpha/beta domain NW98_RS15020 PF00224 Pyruvate kinase, barrel domain NW98_RS15030 PF00162 Phosphoglycerate kinase NW98_RS15045 PF01063 Amino-transferase class IV NW98_RS15055 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NW98_RS15065 PF00561 alpha/beta hydrolase fold NW98_RS15075 PF01435 Peptidase family M48 NW98_RS15075 PF13181 Tetratricopeptide repeat NW98_RS15080 PF01967 MoaC family NW98_RS15100 PF08946 Osmosensory transporter coiled coil NW98_RS15100 PF00083 Sugar (and other) transporter NW98_RS15105 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS15105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS15110 PF00486 Transcriptional regulatory protein, C terminal NW98_RS15110 PF00072 Response regulator receiver domain NW98_RS15115 PF00154 recA bacterial DNA recombination protein NW98_RS15120 PF02631 RecX family NW98_RS15130 PF08442 ATP-grasp domain NW98_RS15130 PF00549 CoA-ligase NW98_RS15135 PF00549 CoA-ligase NW98_RS15135 PF02629 CoA binding domain NW98_RS15140 PF03741 Integral membrane protein TerC family NW98_RS15145 PF07963 Prokaryotic N-terminal methylation motif NW98_RS15145 PF00114 Pilin (bacterial filament) NW98_RS15150 PF11846 Virulence factor membrane-bound polymerase, C-terminal NW98_RS15150 PF04932 O-Antigen ligase NW98_RS15150 PF15864 Protein glycosylation ligase NW98_RS15190 PF08447 PAS fold NW98_RS15190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS15210 PF00072 Response regulator receiver domain NW98_RS15215 PF00563 EAL domain NW98_RS15215 PF00990 Diguanylate cyclase, GGDEF domain NW98_RS15215 PF03707 Bacterial signalling protein N terminal repeat NW98_RS15220 PF00149 Calcineurin-like phosphoesterase NW98_RS15220 PF16656 Purple acid Phosphatase, N-terminal domain NW98_RS15235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NW98_RS15235 PF13378 Enolase C-terminal domain-like NW98_RS15260 PF00034 Cytochrome c NW98_RS15260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NW98_RS15265 PF00271 Helicase conserved C-terminal domain NW98_RS15265 PF00270 DEAD/DEAH box helicase NW98_RS15285 PF08220 DeoR-like helix-turn-helix domain NW98_RS15285 PF00455 DeoR C terminal sensor domain NW98_RS15305 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NW98_RS15305 PF01266 FAD dependent oxidoreductase NW98_RS15310 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NW98_RS15310 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NW98_RS15315 PF00230 Major intrinsic protein NW98_RS15330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NW98_RS15335 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NW98_RS15340 PF00733 Asparagine synthase NW98_RS15340 PF13537 Glutamine amidotransferase domain NW98_RS15355 PF13419 Haloacid dehalogenase-like hydrolase NW98_RS15360 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NW98_RS15365 PF07883 Cupin domain NW98_RS15365 PF01381 Helix-turn-helix NW98_RS15370 PF07690 Major Facilitator Superfamily NW98_RS15375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS15375 PF03466 LysR substrate binding domain NW98_RS15385 PF00919 Uncharacterized protein family UPF0004 NW98_RS15385 PF04055 Radical SAM superfamily NW98_RS15385 PF01938 TRAM domain NW98_RS15390 PF02562 PhoH-like protein NW98_RS15400 PF02130 Uncharacterized protein family UPF0054 NW98_RS15405 PF04752 ChaC-like protein NW98_RS15410 PF03471 Transporter associated domain NW98_RS15410 PF00571 CBS domain NW98_RS15415 PF00795 Carbon-nitrogen hydrolase NW98_RS15420 PF02091 Glycyl-tRNA synthetase alpha subunit NW98_RS15425 PF02092 Glycyl-tRNA synthetase beta subunit NW98_RS15425 PF05746 DALR anticodon binding domain NW98_RS15435 PF01553 Acyltransferase NW98_RS15450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW98_RS15460 PF00398 Ribosomal RNA adenine dimethylase NW98_RS15465 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NW98_RS15470 PF09312 SurA N-terminal domain NW98_RS15470 PF00639 PPIC-type PPIASE domain NW98_RS15475 PF04453 LPS transport system D NW98_RS15480 PF01636 Phosphotransferase enzyme family NW98_RS15485 PF00483 Nucleotidyl transferase NW98_RS15495 PF00664 ABC transporter transmembrane region NW98_RS15495 PF00005 ABC transporter NW98_RS15505 PF03061 Thioesterase superfamily NW98_RS15515 PF02634 FdhD/NarQ family NW98_RS15520 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS15525 PF00108 Thiolase, N-terminal domain NW98_RS15525 PF02803 Thiolase, C-terminal domain NW98_RS15530 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NW98_RS15530 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NW98_RS15530 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS15535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS15535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS15535 PF12806 Acetyl-CoA dehydrogenase C-terminal like NW98_RS15535 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS15545 PF13091 PLD-like domain NW98_RS15550 PF00293 NUDIX domain NW98_RS15555 PF00152 tRNA synthetases class II (D, K and N) NW98_RS15555 PF02938 GAD domain NW98_RS15555 PF01336 OB-fold nucleic acid binding domain NW98_RS15575 PF03109 ABC1 family NW98_RS15590 PF01209 ubiE/COQ5 methyltransferase family NW98_RS15620 PF00585 C-terminal regulatory domain of Threonine dehydratase NW98_RS15620 PF00291 Pyridoxal-phosphate dependent enzyme NW98_RS15625 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NW98_RS15625 PF14489 QueF-like protein NW98_RS15630 PF01042 Endoribonuclease L-PSP NW98_RS15640 PF07969 Amidohydrolase family NW98_RS15645 PF01380 SIS domain NW98_RS15645 PF01418 Helix-turn-helix domain, rpiR family NW98_RS15665 PF07690 Major Facilitator Superfamily NW98_RS15675 PF07859 alpha/beta hydrolase fold NW98_RS15695 PF03372 Endonuclease/Exonuclease/phosphatase family NW98_RS15700 PF03976 Polyphosphate kinase 2 (PPK2) NW98_RS15705 PF02934 GatB/GatE catalytic domain NW98_RS15705 PF02637 GatB domain NW98_RS15710 PF01425 Amidase NW98_RS15715 PF02686 Glu-tRNAGln amidotransferase C subunit NW98_RS15735 PF03717 Penicillin-binding Protein dimerisation domain NW98_RS15735 PF00905 Penicillin binding protein transpeptidase domain NW98_RS15740 PF01098 Cell cycle protein NW98_RS15755 PF03328 HpcH/HpaI aldolase/citrate lyase family NW98_RS15765 PF01242 6-pyruvoyl tetrahydropterin synthase NW98_RS15775 PF06508 Queuosine biosynthesis protein QueC NW98_RS15790 PF02954 Bacterial regulatory protein, Fis family NW98_RS15790 PF00158 Sigma-54 interaction domain NW98_RS15790 PF00072 Response regulator receiver domain NW98_RS15795 PF00989 PAS fold NW98_RS15795 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS15795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS15795 PF00672 HAMP domain NW98_RS15805 PF01189 16S rRNA methyltransferase RsmB/F NW98_RS15805 PF01029 NusB family NW98_RS15815 PF01435 Peptidase family M48 NW98_RS15820 PF01810 LysE type translocator NW98_RS15825 PF00551 Formyl transferase NW98_RS15825 PF02911 Formyl transferase, C-terminal domain NW98_RS15830 PF01327 Polypeptide deformylase NW98_RS15835 PF02481 DNA recombination-mediator protein A NW98_RS15835 PF17782 DprA winged helix domain NW98_RS15845 PF01751 Toprim domain NW98_RS15845 PF01131 DNA topoisomerase NW98_RS15850 PF03466 LysR substrate binding domain NW98_RS15850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS15855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NW98_RS15855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NW98_RS15885 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS15885 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS15885 PF01610 Transposase NW98_RS15920 PF00795 Carbon-nitrogen hydrolase NW98_RS15925 PF00850 Histone deacetylase domain NW98_RS15930 PF13416 Bacterial extracellular solute-binding protein NW98_RS15935 PF03466 LysR substrate binding domain NW98_RS15935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS15965 PF04545 Sigma-70, region 4 NW98_RS15965 PF04542 Sigma-70 region 2 NW98_RS15965 PF00140 Sigma-70 factor, region 1.2 NW98_RS15965 PF04539 Sigma-70 region 3 NW98_RS15965 PF03979 Sigma-70 factor, region 1.1 NW98_RS15965 PF04546 Sigma-70, non-essential region NW98_RS15970 PF04262 Glutamate-cysteine ligase NW98_RS15975 PF00730 HhH-GPD superfamily base excision DNA repair protein NW98_RS15975 PF02805 Metal binding domain of Ada NW98_RS15975 PF06029 AlkA N-terminal domain NW98_RS15975 PF12833 Helix-turn-helix domain NW98_RS15980 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NW98_RS15980 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NW98_RS15980 PF02805 Metal binding domain of Ada NW98_RS15980 PF12833 Helix-turn-helix domain NW98_RS15995 PF07152 YaeQ protein NW98_RS16015 PF10396 GTP-binding protein TrmE N-terminus NW98_RS16015 PF01926 50S ribosome-binding GTPase NW98_RS16015 PF12631 MnmE helical domain NW98_RS16025 PF02096 60Kd inner membrane protein NW98_RS16025 PF14849 YidC periplasmic domain NW98_RS16030 PF01809 Putative membrane protein insertion efficiency factor NW98_RS16035 PF00825 Ribonuclease P NW98_RS16040 PF00468 Ribosomal protein L34 NW98_RS16085 PF00155 Aminotransferase class I and II NW98_RS16090 PF00107 Zinc-binding dehydrogenase NW98_RS16090 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS16105 PF00440 Bacterial regulatory proteins, tetR family NW98_RS16130 PF00180 Isocitrate/isopropylmalate dehydrogenase NW98_RS16135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS16135 PF03466 LysR substrate binding domain NW98_RS16155 PF00043 Glutathione S-transferase, C-terminal domain NW98_RS16155 PF13417 Glutathione S-transferase, N-terminal domain NW98_RS16185 PF06314 Acetoacetate decarboxylase (ADC) NW98_RS16190 PF01569 PAP2 superfamily NW98_RS16210 PF08021 Siderophore-interacting FAD-binding domain NW98_RS16210 PF04954 Siderophore-interacting protein NW98_RS16250 PF02310 B12 binding domain NW98_RS16250 PF04055 Radical SAM superfamily NW98_RS16260 PF01810 LysE type translocator NW98_RS16265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS16265 PF03466 LysR substrate binding domain NW98_RS16270 PF13545 Crp-like helix-turn-helix domain NW98_RS16270 PF00027 Cyclic nucleotide-binding domain NW98_RS16275 PF00582 Universal stress protein family NW98_RS16295 PF00171 Aldehyde dehydrogenase family NW98_RS16315 PF00266 Aminotransferase class-V NW98_RS16325 PF00892 EamA-like transporter family NW98_RS16330 PF07690 Major Facilitator Superfamily NW98_RS16340 PF01799 [2Fe-2S] binding domain NW98_RS16340 PF00111 2Fe-2S iron-sulfur cluster binding domain NW98_RS16345 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NW98_RS16345 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NW98_RS16370 PF00593 TonB dependent receptor NW98_RS16370 PF07715 TonB-dependent Receptor Plug Domain NW98_RS16375 PF00005 ABC transporter NW98_RS16385 PF01032 FecCD transport family NW98_RS16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS16390 PF03466 LysR substrate binding domain NW98_RS16410 PF10605 3HB-oligomer hydrolase (3HBOH) NW98_RS16430 PF01925 Sulfite exporter TauE/SafE NW98_RS16440 PF07690 Major Facilitator Superfamily NW98_RS16445 PF03009 Glycerophosphoryl diester phosphodiesterase family NW98_RS16450 PF01810 LysE type translocator NW98_RS16510 PF00107 Zinc-binding dehydrogenase NW98_RS16510 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS16515 PF01638 HxlR-like helix-turn-helix NW98_RS16530 PF00166 Chaperonin 10 Kd subunit NW98_RS16535 PF00118 TCP-1/cpn60 chaperonin family NW98_RS16545 PF00301 Rubredoxin NW98_RS16555 PF02622 Uncharacterized ACR, COG1678 NW98_RS16560 PF03652 Holliday junction resolvase NW98_RS16565 PF00156 Phosphoribosyl transferase domain NW98_RS16570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NW98_RS16570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NW98_RS16575 PF01979 Amidohydrolase family NW98_RS16585 PF00149 Calcineurin-like phosphoesterase NW98_RS16590 PF16363 GDP-mannose 4,6 dehydratase NW98_RS16595 PF00483 Nucleotidyl transferase NW98_RS16600 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NW98_RS16605 PF04321 RmlD substrate binding domain NW98_RS16615 PF00005 ABC transporter NW98_RS16625 PF01370 NAD dependent epimerase/dehydratase family NW98_RS16640 PF00535 Glycosyl transferase family 2 NW98_RS16650 PF01370 NAD dependent epimerase/dehydratase family NW98_RS16655 PF00953 Glycosyl transferase family 4 NW98_RS16660 PF02719 Polysaccharide biosynthesis protein NW98_RS16670 PF02653 Branched-chain amino acid transport system / permease component NW98_RS16675 PF11862 Domain of unknown function (DUF3382) NW98_RS16675 PF02653 Branched-chain amino acid transport system / permease component NW98_RS16680 PF12399 Branched-chain amino acid ATP-binding cassette transporter NW98_RS16680 PF00005 ABC transporter NW98_RS16685 PF00005 ABC transporter NW98_RS16700 PF00583 Acetyltransferase (GNAT) family NW98_RS16705 PF00202 Aminotransferase class-III NW98_RS16710 PF00175 Oxidoreductase NAD-binding domain NW98_RS16710 PF00111 2Fe-2S iron-sulfur cluster binding domain NW98_RS16710 PF00970 Oxidoreductase FAD-binding domain NW98_RS16725 PF00849 RNA pseudouridylate synthase NW98_RS16725 PF01479 S4 domain NW98_RS16735 PF03466 LysR substrate binding domain NW98_RS16735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS16740 PF03466 LysR substrate binding domain NW98_RS16740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS16745 PF00561 alpha/beta hydrolase fold NW98_RS16750 PF03473 MOSC domain NW98_RS16750 PF03475 3-alpha domain NW98_RS16755 PF00701 Dihydrodipicolinate synthetase family NW98_RS16760 PF00596 Class II Aldolase and Adducin N-terminal domain NW98_RS16765 PF01381 Helix-turn-helix NW98_RS16765 PF08671 Anti-repressor SinI NW98_RS16780 PF00155 Aminotransferase class I and II NW98_RS16785 PF00892 EamA-like transporter family NW98_RS16795 PF00155 Aminotransferase class I and II NW98_RS16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS16805 PF00183 Hsp90 protein NW98_RS16810 PF04345 Chorismate lyase NW98_RS16820 PF13847 Methyltransferase domain NW98_RS16830 PF00474 Sodium:solute symporter family NW98_RS16835 PF06983 3-demethylubiquinone-9 3-methyltransferase NW98_RS16840 PF00923 Transaldolase/Fructose-6-phosphate aldolase NW98_RS16850 PF03594 Benzoate membrane transport protein NW98_RS16860 PF17871 AAA lid domain NW98_RS16860 PF10431 C-terminal, D2-small domain, of ClpB protein NW98_RS16860 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS16860 PF02861 Clp amino terminal domain, pathogenicity island component NW98_RS16860 PF07724 AAA domain (Cdc48 subfamily) NW98_RS16865 PF00034 Cytochrome c NW98_RS16870 PF00034 Cytochrome c NW98_RS16875 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS16875 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS16875 PF01610 Transposase NW98_RS16895 PF00892 EamA-like transporter family NW98_RS16900 PF00730 HhH-GPD superfamily base excision DNA repair protein NW98_RS16900 PF00633 Helix-hairpin-helix motif NW98_RS16900 PF10576 Iron-sulfur binding domain of endonuclease III NW98_RS16905 PF04060 Putative Fe-S cluster NW98_RS16910 PF17938 Tetracyclin repressor-like, C-terminal domain NW98_RS16910 PF00440 Bacterial regulatory proteins, tetR family NW98_RS16920 PF00723 Glycosyl hydrolases family 15 NW98_RS16930 PF10282 Lactonase, 7-bladed beta-propeller NW98_RS16940 PF01580 FtsK/SpoIIIE family NW98_RS16940 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NW98_RS16940 PF09397 Ftsk gamma domain NW98_RS16940 PF17854 FtsK alpha domain NW98_RS16955 PF02222 ATP-grasp domain NW98_RS16955 PF01370 NAD dependent epimerase/dehydratase family NW98_RS16965 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme NW98_RS16975 PF00271 Helicase conserved C-terminal domain NW98_RS16975 PF00270 DEAD/DEAH box helicase NW98_RS16985 PF00749 tRNA synthetases class I (E and Q), catalytic domain NW98_RS16990 PF17773 UPF0176 acylphosphatase like domain NW98_RS17000 PF01336 OB-fold nucleic acid binding domain NW98_RS17000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NW98_RS17000 PF14579 Helix-hairpin-helix motif NW98_RS17000 PF02811 PHP domain NW98_RS17000 PF07733 Bacterial DNA polymerase III alpha NTPase domain NW98_RS17005 PF00664 ABC transporter transmembrane region NW98_RS17005 PF00005 ABC transporter NW98_RS17010 PF00534 Glycosyl transferases group 1 NW98_RS17010 PF13439 Glycosyltransferase Family 4 NW98_RS17025 PF00534 Glycosyl transferases group 1 NW98_RS17025 PF13439 Glycosyltransferase Family 4 NW98_RS17030 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NW98_RS17040 PF00535 Glycosyl transferase family 2 NW98_RS17060 PF07690 Major Facilitator Superfamily NW98_RS17070 PF02627 Carboxymuconolactone decarboxylase family NW98_RS17080 PF12680 SnoaL-like domain NW98_RS17080 PF08281 Sigma-70, region 4 NW98_RS17080 PF04542 Sigma-70 region 2 NW98_RS17135 PF00860 Permease family NW98_RS17145 PF00575 S1 RNA binding domain NW98_RS17145 PF10150 Ribonuclease E/G family NW98_RS17150 PF02545 Maf-like protein NW98_RS17155 PF02590 Predicted SPOUT methyltransferase NW98_RS17165 PF01467 Cytidylyltransferase-like NW98_RS17170 PF01218 Coproporphyrinogen III oxidase NW98_RS17175 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NW98_RS17175 PF02843 Phosphoribosylglycinamide synthetase, C domain NW98_RS17175 PF02844 Phosphoribosylglycinamide synthetase, N domain NW98_RS17180 PF01709 Transcriptional regulator NW98_RS17200 PF02142 MGS-like domain NW98_RS17210 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS17210 PF00107 Zinc-binding dehydrogenase NW98_RS17225 PF03814 Potassium-transporting ATPase A subunit NW98_RS17235 PF02669 K+-transporting ATPase, c chain NW98_RS17250 PF00072 Response regulator receiver domain NW98_RS17250 PF00486 Transcriptional regulatory protein, C terminal NW98_RS17260 PF00893 Small Multidrug Resistance protein NW98_RS17285 PF02272 DHHA1 domain NW98_RS17285 PF01411 tRNA synthetases class II (A) NW98_RS17285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NW98_RS17295 PF01425 Amidase NW98_RS17300 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS17300 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS17300 PF01610 Transposase NW98_RS17310 PF07690 Major Facilitator Superfamily NW98_RS17330 PF03641 Possible lysine decarboxylase NW98_RS17335 PF00440 Bacterial regulatory proteins, tetR family NW98_RS17335 PF08360 QacR-like protein, C-terminal region NW98_RS17340 PF01219 Prokaryotic diacylglycerol kinase NW98_RS17345 PF13439 Glycosyltransferase Family 4 NW98_RS17345 PF00534 Glycosyl transferases group 1 NW98_RS17380 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW98_RS17380 PF00205 Thiamine pyrophosphate enzyme, central domain NW98_RS17380 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW98_RS17385 PF10369 Small subunit of acetolactate synthase NW98_RS17390 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NW98_RS17390 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NW98_RS17395 PF02666 Phosphatidylserine decarboxylase NW98_RS17400 PF01066 CDP-alcohol phosphatidyltransferase NW98_RS17410 PF01740 STAS domain NW98_RS17410 PF00916 Sulfate permease family NW98_RS17415 PF00484 Carbonic anhydrase NW98_RS17430 PF13458 Periplasmic binding protein NW98_RS17435 PF00312 Ribosomal protein S15 NW98_RS17445 PF00013 KH domain NW98_RS17445 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NW98_RS17445 PF03725 3' exoribonuclease family, domain 2 NW98_RS17445 PF01138 3' exoribonuclease family, domain 1 NW98_RS17445 PF00575 S1 RNA binding domain NW98_RS17450 PF00698 Acyl transferase domain NW98_RS17450 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS17450 PF08659 KR domain NW98_RS17450 PF14765 Polyketide synthase dehydratase NW98_RS17450 PF00550 Phosphopantetheine attachment site NW98_RS17455 PF00121 Triosephosphate isomerase NW98_RS17460 PF03840 Preprotein translocase SecG subunit NW98_RS17470 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NW98_RS17475 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NW98_RS17480 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NW98_RS17485 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NW98_RS17495 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NW98_RS17495 PF10531 SLBB domain NW98_RS17495 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NW98_RS17500 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NW98_RS17500 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal NW98_RS17500 PF00384 Molybdopterin oxidoreductase NW98_RS17505 PF00146 NADH dehydrogenase NW98_RS17510 PF12838 4Fe-4S dicluster domain NW98_RS17515 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NW98_RS17520 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NW98_RS17525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NW98_RS17525 PF00361 Proton-conducting membrane transporter NW98_RS17530 PF00361 Proton-conducting membrane transporter NW98_RS17530 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NW98_RS17535 PF00361 Proton-conducting membrane transporter NW98_RS17545 PF00293 NUDIX domain NW98_RS17555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS17555 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS17555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS17560 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS17560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS17560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS17565 PF01575 MaoC like domain NW98_RS17565 PF00171 Aldehyde dehydrogenase family NW98_RS17570 PF01575 MaoC like domain NW98_RS17585 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS17585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS17585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS17595 PF00300 Histidine phosphatase superfamily (branch 1) NW98_RS17600 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS17610 PF00155 Aminotransferase class I and II NW98_RS17620 PF03883 Peroxide stress protein YaaA NW98_RS17625 PF18027 Cytosolic carboxypeptidase N-terminal domain NW98_RS17625 PF00246 Zinc carboxypeptidase NW98_RS17640 PF00072 Response regulator receiver domain NW98_RS17640 PF00196 Bacterial regulatory proteins, luxR family NW98_RS17710 PF03485 Arginyl tRNA synthetase N terminal domain NW98_RS17710 PF05746 DALR anticodon binding domain NW98_RS17710 PF00750 tRNA synthetases class I (R) NW98_RS17720 PF13462 Thioredoxin NW98_RS17725 PF00106 short chain dehydrogenase NW98_RS17750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW98_RS17755 PF00005 ABC transporter NW98_RS17755 PF12848 ABC transporter NW98_RS17755 PF16326 ABC transporter C-terminal domain NW98_RS17770 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NW98_RS17775 PF00484 Carbonic anhydrase NW98_RS17780 PF02803 Thiolase, C-terminal domain NW98_RS17780 PF00108 Thiolase, N-terminal domain NW98_RS17800 PF00202 Aminotransferase class-III NW98_RS17805 PF00155 Aminotransferase class I and II NW98_RS17815 PF06968 Biotin and Thiamin Synthesis associated domain NW98_RS17815 PF04055 Radical SAM superfamily NW98_RS17820 PF03932 CutC family NW98_RS17835 PF00245 Alkaline phosphatase NW98_RS17840 PF00245 Alkaline phosphatase NW98_RS17860 PF13609 Gram-negative porin NW98_RS17875 PF13593 SBF-like CPA transporter family (DUF4137) NW98_RS17885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS17885 PF00672 HAMP domain NW98_RS17885 PF02203 Tar ligand binding domain homologue NW98_RS17890 PF00356 Bacterial regulatory proteins, lacI family NW98_RS17900 PF00294 pfkB family carbohydrate kinase NW98_RS17930 PF01171 PP-loop family NW98_RS17945 PF00132 Bacterial transferase hexapeptide (six repeats) NW98_RS17945 PF12804 MobA-like NTP transferase domain NW98_RS17950 PF01380 SIS domain NW98_RS17965 PF00873 AcrB/AcrD/AcrF family NW98_RS17970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS17970 PF00529 HlyD membrane-fusion protein of T1SS NW98_RS17990 PF04536 TPM domain NW98_RS17995 PF04011 LemA family NW98_RS18005 PF04945 YHS domain NW98_RS18030 PF00764 Arginosuccinate synthase NW98_RS18040 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS18040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NW98_RS18055 PF00793 DAHP synthetase I family NW98_RS18065 PF01523 Putative modulator of DNA gyrase NW98_RS18070 PF00795 Carbon-nitrogen hydrolase NW98_RS18075 PF13502 AsmA-like C-terminal region NW98_RS18075 PF13116 Protein of unknown function NW98_RS18080 PF08335 GlnD PII-uridylyltransferase NW98_RS18080 PF03710 Glutamate-ammonia ligase adenylyltransferase NW98_RS18085 PF02463 RecF/RecN/SMC N terminal domain NW98_RS18090 PF01513 ATP-NAD kinase NW98_RS18095 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NW98_RS18095 PF01628 HrcA protein C terminal domain NW98_RS18100 PF00762 Ferrochelatase NW98_RS18105 PF01479 S4 domain NW98_RS18110 PF01025 GrpE NW98_RS18120 PF00012 Hsp70 protein NW98_RS18125 PF01556 DnaJ C terminal domain NW98_RS18125 PF00226 DnaJ domain NW98_RS18125 PF00684 DnaJ central domain NW98_RS18130 PF00425 chorismate binding enzyme NW98_RS18130 PF04715 Anthranilate synthase component I, N terminal region NW98_RS18135 PF02548 Ketopantoate hydroxymethyltransferase NW98_RS18140 PF01712 Deoxynucleoside kinase NW98_RS18145 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NW98_RS18150 PF12626 Polymerase A arginine-rich C-terminus NW98_RS18150 PF01743 Poly A polymerase head domain NW98_RS18150 PF12627 Probable RNA and SrmB- binding site of polymerase A NW98_RS18160 PF00308 Bacterial dnaA protein NW98_RS18170 PF02769 AIR synthase related protein, C-terminal domain NW98_RS18170 PF00586 AIR synthase related protein, N-terminal domain NW98_RS18190 PF01119 DNA mismatch repair protein, C-terminal domain NW98_RS18190 PF08676 MutL C terminal dimerisation domain NW98_RS18195 PF09335 SNARE associated Golgi protein NW98_RS18200 PF00924 Mechanosensitive ion channel NW98_RS18200 PF05552 Conserved TM helix NW98_RS18210 PF00483 Nucleotidyl transferase NW98_RS18210 PF01050 Mannose-6-phosphate isomerase NW98_RS18215 PF05159 Capsule polysaccharide biosynthesis protein NW98_RS18225 PF02563 Polysaccharide biosynthesis/export protein NW98_RS18235 PF01061 ABC-2 type transporter NW98_RS18240 PF00005 ABC transporter NW98_RS18275 PF16363 GDP-mannose 4,6 dehydratase NW98_RS18280 PF00288 GHMP kinases N terminal domain NW98_RS18280 PF08544 GHMP kinases C terminal NW98_RS18285 PF13580 SIS domain NW98_RS18290 PF00483 Nucleotidyl transferase NW98_RS18300 PF05159 Capsule polysaccharide biosynthesis protein NW98_RS18310 PF00884 Sulfatase NW98_RS18315 PF14765 Polyketide synthase dehydratase NW98_RS18315 PF00109 Beta-ketoacyl synthase, N-terminal domain NW98_RS18315 PF02801 Beta-ketoacyl synthase, C-terminal domain NW98_RS18315 PF00698 Acyl transferase domain NW98_RS18315 PF16197 Ketoacyl-synthetase C-terminal extension NW98_RS18315 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS18315 PF08659 KR domain NW98_RS18315 PF00550 Phosphopantetheine attachment site NW98_RS18320 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NW98_RS18325 PF00155 Aminotransferase class I and II NW98_RS18365 PF03764 Elongation factor G, domain IV NW98_RS18365 PF00679 Elongation factor G C-terminus NW98_RS18365 PF03144 Elongation factor Tu domain 2 NW98_RS18365 PF00009 Elongation factor Tu GTP binding domain NW98_RS18365 PF14492 Elongation Factor G, domain II NW98_RS18405 PF00248 Aldo/keto reductase family NW98_RS18410 PF00392 Bacterial regulatory proteins, gntR family NW98_RS18410 PF07702 UTRA domain NW98_RS18420 PF00285 Citrate synthase, C-terminal domain NW98_RS18430 PF07690 Major Facilitator Superfamily NW98_RS18485 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NW98_RS18485 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NW98_RS18490 PF13742 OB-fold nucleic acid binding domain NW98_RS18490 PF02601 Exonuclease VII, large subunit NW98_RS18500 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NW98_RS18505 PF03966 Trm112p-like protein NW98_RS18510 PF02348 Cytidylyltransferase NW98_RS18520 PF05191 Adenylate kinase, active site lid NW98_RS18530 PF00313 'Cold-shock' DNA-binding domain NW98_RS18535 PF02617 ATP-dependent Clp protease adaptor protein ClpS NW98_RS18540 PF10431 C-terminal, D2-small domain, of ClpB protein NW98_RS18540 PF02861 Clp amino terminal domain, pathogenicity island component NW98_RS18540 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS18540 PF07724 AAA domain (Cdc48 subfamily) NW98_RS18540 PF17871 AAA lid domain NW98_RS18565 PF00692 dUTPase NW98_RS18570 PF04127 DNA / pantothenate metabolism flavoprotein NW98_RS18570 PF02441 Flavoprotein NW98_RS18575 PF01252 Signal peptidase (SPase) II NW98_RS18580 PF08264 Anticodon-binding domain of tRNA NW98_RS18580 PF06827 Zinc finger found in FPG and IleRS NW98_RS18580 PF00133 tRNA synthetases class I (I, L, M and V) NW98_RS18585 PF06574 FAD synthetase NW98_RS18585 PF01687 Riboflavin kinase NW98_RS18590 PF00551 Formyl transferase NW98_RS18595 PF01189 16S rRNA methyltransferase RsmB/F NW98_RS18595 PF01029 NusB family NW98_RS18600 PF12794 Mechanosensitive ion channel inner membrane domain 1 NW98_RS18600 PF12795 Mechanosensitive ion channel porin domain NW98_RS18600 PF00924 Mechanosensitive ion channel NW98_RS18610 PF02445 Quinolinate synthetase A protein NW98_RS18615 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NW98_RS18615 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NW98_RS18625 PF00890 FAD binding domain NW98_RS18625 PF02910 Fumarate reductase flavoprotein C-term NW98_RS18630 PF00471 Ribosomal protein L33 NW98_RS18635 PF00830 Ribosomal L28 family NW98_RS18640 PF04002 RadC-like JAB domain NW98_RS18645 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NW98_RS18650 PF02401 LytB protein NW98_RS18685 PF01176 Translation initiation factor 1A / IF-1 NW98_RS18705 PF00301 Rubredoxin NW98_RS18720 PF00005 ABC transporter NW98_RS18720 PF16326 ABC transporter C-terminal domain NW98_RS18720 PF12848 ABC transporter NW98_RS18725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS18725 PF00204 DNA gyrase B NW98_RS18725 PF01751 Toprim domain NW98_RS18725 PF00986 DNA gyrase B subunit, carboxyl terminus NW98_RS18730 PF00521 DNA gyrase/topoisomerase IV, subunit A NW98_RS18750 PF03466 LysR substrate binding domain NW98_RS18750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS18760 PF03466 LysR substrate binding domain NW98_RS18760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS18770 PF00083 Sugar (and other) transporter NW98_RS18770 PF07690 Major Facilitator Superfamily NW98_RS18775 PF01546 Peptidase family M20/M25/M40 NW98_RS18775 PF07687 Peptidase dimerisation domain NW98_RS18785 PF00850 Histone deacetylase domain NW98_RS18800 PF00563 EAL domain NW98_RS18800 PF00990 Diguanylate cyclase, GGDEF domain NW98_RS18800 PF03707 Bacterial signalling protein N terminal repeat NW98_RS18805 PF02567 Phenazine biosynthesis-like protein NW98_RS18825 PF16363 GDP-mannose 4,6 dehydratase NW98_RS18830 PF13439 Glycosyltransferase Family 4 NW98_RS18830 PF00534 Glycosyl transferases group 1 NW98_RS18850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NW98_RS18850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NW98_RS18850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NW98_RS18850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NW98_RS18855 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NW98_RS18865 PF00534 Glycosyl transferases group 1 NW98_RS18865 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NW98_RS18870 PF02492 CobW/HypB/UreG, nucleotide-binding domain NW98_RS18875 PF01730 UreF NW98_RS18880 PF02814 UreE urease accessory protein, N-terminal domain NW98_RS18880 PF05194 UreE urease accessory protein, C-terminal domain NW98_RS18885 PF00449 Urease alpha-subunit, N-terminal domain NW98_RS18885 PF01979 Amidohydrolase family NW98_RS18890 PF00699 Urease beta subunit NW98_RS18895 PF00547 Urease, gamma subunit NW98_RS18900 PF01774 UreD urease accessory protein NW98_RS18905 PF00005 ABC transporter NW98_RS18910 PF00005 ABC transporter NW98_RS18915 PF02653 Branched-chain amino acid transport system / permease component NW98_RS18920 PF02653 Branched-chain amino acid transport system / permease component NW98_RS18935 PF00202 Aminotransferase class-III NW98_RS18940 PF00581 Rhodanese-like domain NW98_RS18955 PF04055 Radical SAM superfamily NW98_RS18955 PF06969 HemN C-terminal domain NW98_RS18965 PF03692 Putative zinc- or iron-chelating domain NW98_RS18975 PF02673 Bacitracin resistance protein BacA NW98_RS18980 PF02390 Putative methyltransferase NW98_RS18990 PF02146 Sir2 family NW98_RS18995 PF08241 Methyltransferase domain NW98_RS19005 PF09286 Pro-kumamolisin, activation domain NW98_RS19005 PF00082 Subtilase family NW98_RS19020 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NW98_RS19030 PF02325 YGGT family NW98_RS19055 PF00291 Pyridoxal-phosphate dependent enzyme NW98_RS19065 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NW98_RS19075 PF01464 Transglycosylase SLT domain NW98_RS19085 PF00155 Aminotransferase class I and II NW98_RS19090 PF01029 NusB family NW98_RS19095 PF00885 6,7-dimethyl-8-ribityllumazine synthase NW98_RS19100 PF00925 GTP cyclohydrolase II NW98_RS19100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NW98_RS19110 PF00677 Lumazine binding domain NW98_RS19115 PF01872 RibD C-terminal domain NW98_RS19115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NW98_RS19120 PF00202 Aminotransferase class-III NW98_RS19140 PF07690 Major Facilitator Superfamily NW98_RS19150 PF00291 Pyridoxal-phosphate dependent enzyme NW98_RS19155 PF00005 ABC transporter NW98_RS19160 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS19165 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS19180 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NW98_RS19185 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NW98_RS19185 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NW98_RS19190 PF01547 Bacterial extracellular solute-binding protein NW98_RS19195 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS19200 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS19205 PF17912 MalK OB fold domain NW98_RS19205 PF00005 ABC transporter NW98_RS19210 PF03458 UPF0126 domain NW98_RS19215 PF00488 MutS domain V NW98_RS19215 PF01713 Smr domain NW98_RS19220 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS19225 PF01580 FtsK/SpoIIIE family NW98_RS19225 PF09397 Ftsk gamma domain NW98_RS19225 PF17854 FtsK alpha domain NW98_RS19225 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NW98_RS19230 PF03548 Outer membrane lipoprotein carrier protein LolA NW98_RS19240 PF16193 AAA C-terminal domain NW98_RS19240 PF12002 MgsA AAA+ ATPase C terminal NW98_RS19240 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS19250 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NW98_RS19250 PF02403 Seryl-tRNA synthetase N-terminal domain NW98_RS19280 PF05209 Septum formation inhibitor MinC, N-terminal domain NW98_RS19280 PF03775 Septum formation inhibitor MinC, C-terminal domain NW98_RS19285 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NW98_RS19290 PF03776 Septum formation topological specificity factor MinE NW98_RS19300 PF00654 Voltage gated chloride channel NW98_RS19305 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NW98_RS19315 PF00083 Sugar (and other) transporter NW98_RS19315 PF07690 Major Facilitator Superfamily NW98_RS19350 PF04055 Radical SAM superfamily NW98_RS19350 PF06969 HemN C-terminal domain NW98_RS19355 PF01725 Ham1 family NW98_RS19360 PF03725 3' exoribonuclease family, domain 2 NW98_RS19360 PF01138 3' exoribonuclease family, domain 1 NW98_RS19365 PF03755 YicC-like family, N-terminal region NW98_RS19365 PF08340 Domain of unknown function (DUF1732) NW98_RS19370 PF00625 Guanylate kinase NW98_RS19375 PF01192 RNA polymerase Rpb6 NW98_RS19380 PF13291 ACT domain NW98_RS19380 PF04607 Region found in RelA / SpoT proteins NW98_RS19380 PF02824 TGS domain NW98_RS19395 PF03449 Transcription elongation factor, N-terminal NW98_RS19395 PF01272 Transcription elongation factor, GreA/GreB, C-term NW98_RS19400 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS19400 PF01610 Transposase NW98_RS19400 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS19435 PF00691 OmpA family NW98_RS19440 PF04052 TolB amino-terminal domain NW98_RS19440 PF07676 WD40-like Beta Propeller Repeat NW98_RS19450 PF02472 Biopolymer transport protein ExbD/TolR NW98_RS19455 PF01618 MotA/TolQ/ExbB proton channel family NW98_RS19460 PF03061 Thioesterase superfamily NW98_RS19465 PF00106 short chain dehydrogenase NW98_RS19475 PF00464 Serine hydroxymethyltransferase NW98_RS19480 PF03477 ATP cone domain NW98_RS19525 PF00578 AhpC/TSA family NW98_RS19525 PF10417 C-terminal domain of 1-Cys peroxiredoxin NW98_RS19535 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS19535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS19535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS19570 PF01494 FAD binding domain NW98_RS19580 PF07690 Major Facilitator Superfamily NW98_RS19585 PF04209 homogentisate 1,2-dioxygenase NW98_RS19605 PF07690 Major Facilitator Superfamily NW98_RS19610 PF00881 Nitroreductase family NW98_RS19615 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NW98_RS19615 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NW98_RS19620 PF03466 LysR substrate binding domain NW98_RS19620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS19655 PF00132 Bacterial transferase hexapeptide (six repeats) NW98_RS19665 PF01227 GTP cyclohydrolase I NW98_RS19670 PF03466 LysR substrate binding domain NW98_RS19670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS19675 PF01494 FAD binding domain NW98_RS19680 PF01144 Coenzyme A transferase NW98_RS19685 PF01144 Coenzyme A transferase NW98_RS19690 PF10397 Adenylosuccinate lyase C-terminus NW98_RS19690 PF00206 Lyase NW98_RS19695 PF12146 Serine aminopeptidase, S33 NW98_RS19700 PF02627 Carboxymuconolactone decarboxylase family NW98_RS19705 PF07690 Major Facilitator Superfamily NW98_RS19730 PF09828 Chromate resistance exported protein NW98_RS19750 PF09828 Chromate resistance exported protein NW98_RS19775 PF08281 Sigma-70, region 4 NW98_RS19775 PF04542 Sigma-70 region 2 NW98_RS19780 PF17755 UvrA DNA-binding domain NW98_RS19780 PF17760 UvrA interaction domain NW98_RS19780 PF00005 ABC transporter NW98_RS19815 PF00816 H-NS histone family NW98_RS19830 PF00083 Sugar (and other) transporter NW98_RS19835 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS19835 PF02743 Cache domain NW98_RS19835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS19840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS19840 PF02743 Cache domain NW98_RS19840 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS19845 PF02954 Bacterial regulatory protein, Fis family NW98_RS19845 PF00072 Response regulator receiver domain NW98_RS19845 PF00158 Sigma-54 interaction domain NW98_RS19895 PF04185 Phosphoesterase family NW98_RS19895 PF05506 Domain of unknown function (DUF756) NW98_RS19920 PF13614 AAA domain NW98_RS19920 PF02706 Chain length determinant protein NW98_RS19920 PF13807 G-rich domain on putative tyrosine kinase NW98_RS19965 PF04151 Bacterial pre-peptidase C-terminal domain NW98_RS19965 PF09286 Pro-kumamolisin, activation domain NW98_RS19990 PF00990 Diguanylate cyclase, GGDEF domain NW98_RS19990 PF00072 Response regulator receiver domain NW98_RS20000 PF00561 alpha/beta hydrolase fold NW98_RS20005 PF00743 Flavin-binding monooxygenase-like NW98_RS20010 PF00106 short chain dehydrogenase NW98_RS20025 PF03466 LysR substrate binding domain NW98_RS20025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS20040 PF02798 Glutathione S-transferase, N-terminal domain NW98_RS20060 PF07662 Na+ dependent nucleoside transporter C-terminus NW98_RS20060 PF01773 Na+ dependent nucleoside transporter N-terminus NW98_RS20065 PF01791 DeoC/LacD family aldolase NW98_RS20090 PF02885 Glycosyl transferase family, helical bundle domain NW98_RS20090 PF00591 Glycosyl transferase family, a/b domain NW98_RS20090 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain NW98_RS20095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NW98_RS20105 PF04972 BON domain NW98_RS20115 PF00294 pfkB family carbohydrate kinase NW98_RS20130 PF00871 Acetokinase family NW98_RS20135 PF01515 Phosphate acetyl/butaryl transferase NW98_RS20140 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus NW98_RS20140 PF00561 alpha/beta hydrolase fold NW98_RS20150 PF02874 ATP synthase alpha/beta family, beta-barrel domain NW98_RS20150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW98_RS20155 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NW98_RS20170 PF00119 ATP synthase A chain NW98_RS20175 PF00137 ATP synthase subunit C NW98_RS20180 PF00430 ATP synthase B/B' CF(0) NW98_RS20185 PF00306 ATP synthase alpha/beta chain, C terminal domain NW98_RS20185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW98_RS20185 PF02874 ATP synthase alpha/beta family, beta-barrel domain NW98_RS20200 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS20200 PF00107 Zinc-binding dehydrogenase NW98_RS20215 PF00672 HAMP domain NW98_RS20215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS20215 PF02203 Tar ligand binding domain homologue NW98_RS20225 PF00072 Response regulator receiver domain NW98_RS20225 PF13426 PAS domain NW98_RS20225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS20235 PF00005 ABC transporter NW98_RS20245 PF02321 Outer membrane efflux protein NW98_RS20250 PF00440 Bacterial regulatory proteins, tetR family NW98_RS20260 PF00582 Universal stress protein family NW98_RS20275 PF00005 ABC transporter NW98_RS20300 PF00672 HAMP domain NW98_RS20300 PF02203 Tar ligand binding domain homologue NW98_RS20300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS20305 PF00009 Elongation factor Tu GTP binding domain NW98_RS20340 PF03641 Possible lysine decarboxylase NW98_RS20365 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS20375 PF00027 Cyclic nucleotide-binding domain NW98_RS20375 PF13545 Crp-like helix-turn-helix domain NW98_RS20385 PF00106 short chain dehydrogenase NW98_RS20395 PF10996 Beta-Casp domain NW98_RS20395 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain NW98_RS20395 PF00753 Metallo-beta-lactamase superfamily NW98_RS20420 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS20425 PF01266 FAD dependent oxidoreductase NW98_RS20430 PF03466 LysR substrate binding domain NW98_RS20430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS20440 PF00106 short chain dehydrogenase NW98_RS20470 PF17678 Glycosyl hydrolase family 92 N-terminal domain NW98_RS20470 PF07971 Glycosyl hydrolase family 92 NW98_RS20485 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS20485 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS20485 PF01610 Transposase NW98_RS20500 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal NW98_RS20500 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal NW98_RS20505 PF00733 Asparagine synthase NW98_RS20505 PF13537 Glutamine amidotransferase domain NW98_RS20510 PF00107 Zinc-binding dehydrogenase NW98_RS20510 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS20520 PF03466 LysR substrate binding domain NW98_RS20520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS20550 PF06761 Intracellular multiplication and human macrophage-killing NW98_RS20550 PF14331 ImcF-related N-terminal domain NW98_RS20550 PF06744 Type VI secretion protein IcmF C-terminal NW98_RS20555 PF13488 Glycine zipper NW98_RS20555 PF00691 OmpA family NW98_RS20560 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NW98_RS20575 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NW98_RS20580 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 NW98_RS20610 PF07024 ImpE protein NW98_RS20620 PF05947 Type VI secretion system, TssF NW98_RS20630 PF06812 ImpA, N-terminal, type VI secretion system NW98_RS20635 PF04717 Type VI secretion system, phage-baseplate injector NW98_RS20635 PF06715 Gp5 C-terminal repeat (3 copies) NW98_RS20675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS20675 PF03466 LysR substrate binding domain NW98_RS20680 PF02525 Flavodoxin-like fold NW98_RS20695 PF01053 Cys/Met metabolism PLP-dependent enzyme NW98_RS20730 PF02626 Carboxyltransferase domain, subdomain A and B NW98_RS20740 PF02785 Biotin carboxylase C-terminal domain NW98_RS20740 PF00289 Biotin carboxylase, N-terminal domain NW98_RS20740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NW98_RS20745 PF00364 Biotin-requiring enzyme NW98_RS20750 PF03746 LamB/YcsF family NW98_RS20760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS20760 PF03466 LysR substrate binding domain NW98_RS20775 PF01804 Penicillin amidase NW98_RS20785 PF00561 alpha/beta hydrolase fold NW98_RS20815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS20815 PF00672 HAMP domain NW98_RS20815 PF02203 Tar ligand binding domain homologue NW98_RS20825 PF02954 Bacterial regulatory protein, Fis family NW98_RS20825 PF06506 Propionate catabolism activator NW98_RS20825 PF00158 Sigma-54 interaction domain NW98_RS20835 PF00285 Citrate synthase, C-terminal domain NW98_RS20840 PF00694 Aconitase C-terminal domain NW98_RS20840 PF00330 Aconitase family (aconitate hydratase) NW98_RS20845 PF04303 PrpF protein NW98_RS20875 PF04055 Radical SAM superfamily NW98_RS20875 PF13186 Iron-sulfur cluster-binding domain NW98_RS20885 PF02203 Tar ligand binding domain homologue NW98_RS20885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS20885 PF00672 HAMP domain NW98_RS20900 PF03466 LysR substrate binding domain NW98_RS20900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS20910 PF02308 MgtC family NW98_RS20945 PF00403 Heavy-metal-associated domain NW98_RS20995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW98_RS21030 PF02322 Cytochrome bd terminal oxidase subunit II NW98_RS21035 PF01654 Cytochrome bd terminal oxidase subunit I NW98_RS21045 PF01212 Beta-eliminating lyase NW98_RS21050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS21050 PF03466 LysR substrate binding domain NW98_RS21055 PF17092 Penicillin-binding protein OB-like domain NW98_RS21055 PF00912 Transglycosylase NW98_RS21055 PF00905 Penicillin binding protein transpeptidase domain NW98_RS21060 PF03458 UPF0126 domain NW98_RS21065 PF00005 ABC transporter NW98_RS21075 PF01032 FecCD transport family NW98_RS21085 PF01497 Periplasmic binding protein NW98_RS21090 PF05171 Haemin-degrading HemS.ChuX domain NW98_RS21095 PF00593 TonB dependent receptor NW98_RS21095 PF04886 PT repeat NW98_RS21095 PF07715 TonB-dependent Receptor Plug Domain NW98_RS21105 PF03466 LysR substrate binding domain NW98_RS21105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS21120 PF08402 TOBE domain NW98_RS21120 PF00005 ABC transporter NW98_RS21140 PF13609 Gram-negative porin NW98_RS21150 PF02502 Ribose/Galactose Isomerase NW98_RS21155 PF00005 ABC transporter NW98_RS21160 PF02653 Branched-chain amino acid transport system / permease component NW98_RS21165 PF13407 Periplasmic binding protein domain NW98_RS21175 PF00107 Zinc-binding dehydrogenase NW98_RS21175 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS21180 PF02733 Dak1 domain NW98_RS21185 PF02734 DAK2 domain NW98_RS21190 PF00583 Acetyltransferase (GNAT) family NW98_RS21215 PF02472 Biopolymer transport protein ExbD/TolR NW98_RS21220 PF01618 MotA/TolQ/ExbB proton channel family NW98_RS21235 PF01177 Asp/Glu/Hydantoin racemase NW98_RS21240 PF00210 Ferritin-like domain NW98_RS21250 PF03350 Uncharacterized protein family, UPF0114 NW98_RS21260 PF13193 AMP-binding enzyme C-terminal domain NW98_RS21260 PF00501 AMP-binding enzyme NW98_RS21260 PF16177 Acetyl-coenzyme A synthetase N-terminus NW98_RS21270 PF00474 Sodium:solute symporter family NW98_RS21290 PF13192 Thioredoxin domain NW98_RS21290 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS21295 PF10417 C-terminal domain of 1-Cys peroxiredoxin NW98_RS21295 PF00578 AhpC/TSA family NW98_RS21310 PF00881 Nitroreductase family NW98_RS21320 PF14403 Circularly permuted ATP-grasp type 2 NW98_RS21345 PF14403 Circularly permuted ATP-grasp type 2 NW98_RS21345 PF04168 A predicted alpha-helical domain with a conserved ER motif. NW98_RS21350 PF08379 Bacterial transglutaminase-like N-terminal region NW98_RS21350 PF01841 Transglutaminase-like superfamily NW98_RS21355 PF00155 Aminotransferase class I and II NW98_RS21355 PF00392 Bacterial regulatory proteins, gntR family NW98_RS21360 PF07690 Major Facilitator Superfamily NW98_RS21370 PF04632 Fusaric acid resistance protein family NW98_RS21375 PF01965 DJ-1/PfpI family NW98_RS21375 PF12833 Helix-turn-helix domain NW98_RS21380 PF01965 DJ-1/PfpI family NW98_RS21385 PF00266 Aminotransferase class-V NW98_RS21420 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NW98_RS21420 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NW98_RS21440 PF13520 Amino acid permease NW98_RS21445 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NW98_RS21450 PF02441 Flavoprotein NW98_RS21455 PF00462 Glutaredoxin NW98_RS21460 PF17827 PrmC N-terminal domain NW98_RS21460 PF05175 Methyltransferase small domain NW98_RS21465 PF00472 RF-1 domain NW98_RS21465 PF03462 PCRF domain NW98_RS21470 PF01488 Shikimate / quinate 5-dehydrogenase NW98_RS21470 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NW98_RS21470 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NW98_RS21490 PF01321 Creatinase/Prolidase N-terminal domain NW98_RS21490 PF00557 Metallopeptidase family M24 NW98_RS21495 PF00857 Isochorismatase family NW98_RS21505 PF00005 ABC transporter NW98_RS21505 PF12848 ABC transporter NW98_RS21520 PF03009 Glycerophosphoryl diester phosphodiesterase family NW98_RS21540 PF00324 Amino acid permease NW98_RS21550 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NW98_RS21555 PF06071 Protein of unknown function (DUF933) NW98_RS21555 PF01926 50S ribosome-binding GTPase NW98_RS21585 PF01494 FAD binding domain NW98_RS21590 PF10411 Disulfide bond isomerase protein N-terminus NW98_RS21590 PF13098 Thioredoxin-like domain NW98_RS21600 PF02525 Flavodoxin-like fold NW98_RS21605 PF03167 Uracil DNA glycosylase superfamily NW98_RS21615 PF00218 Indole-3-glycerol phosphate synthase NW98_RS21620 PF02885 Glycosyl transferase family, helical bundle domain NW98_RS21620 PF00591 Glycosyl transferase family, a/b domain NW98_RS21625 PF00117 Glutamine amidotransferase class-I NW98_RS21630 PF04715 Anthranilate synthase component I, N terminal region NW98_RS21630 PF00425 chorismate binding enzyme NW98_RS21640 PF13419 Haloacid dehalogenase-like hydrolase NW98_RS21645 PF00834 Ribulose-phosphate 3 epimerase family NW98_RS21655 PF04379 ApaG domain NW98_RS21665 PF03562 MltA specific insert domain NW98_RS21665 PF06725 3D domain NW98_RS21670 PF00501 AMP-binding enzyme NW98_RS21670 PF14535 AMP-binding enzyme C-terminal domain NW98_RS21680 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS21685 PF02803 Thiolase, C-terminal domain NW98_RS21685 PF00108 Thiolase, N-terminal domain NW98_RS21695 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS21760 PF03009 Glycerophosphoryl diester phosphodiesterase family NW98_RS21795 PF01758 Sodium Bile acid symporter family NW98_RS21810 PF01022 Bacterial regulatory protein, arsR family NW98_RS21835 PF03358 NADPH-dependent FMN reductase NW98_RS21850 PF00005 ABC transporter NW98_RS21850 PF00571 CBS domain NW98_RS21855 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS21860 PF01965 DJ-1/PfpI family NW98_RS21860 PF12833 Helix-turn-helix domain NW98_RS21865 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NW98_RS21900 PF01370 NAD dependent epimerase/dehydratase family NW98_RS21905 PF01261 Xylose isomerase-like TIM barrel NW98_RS21910 PF07690 Major Facilitator Superfamily NW98_RS21915 PF00596 Class II Aldolase and Adducin N-terminal domain NW98_RS21920 PF17042 Nucleotide-binding C-terminal domain NW98_RS21920 PF07005 Sugar-binding N-terminal domain NW98_RS21925 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NW98_RS21925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NW98_RS21930 PF00392 Bacterial regulatory proteins, gntR family NW98_RS21930 PF07729 FCD domain NW98_RS21970 PF13609 Gram-negative porin NW98_RS21995 PF03576 Peptidase family S58 NW98_RS22010 PF04632 Fusaric acid resistance protein family NW98_RS22015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS22015 PF03466 LysR substrate binding domain NW98_RS22040 PF13609 Gram-negative porin NW98_RS22055 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NW98_RS22060 PF13556 PucR C-terminal helix-turn-helix domain NW98_RS22060 PF17853 GGDEF-like domain NW98_RS22070 PF07690 Major Facilitator Superfamily NW98_RS22085 PF00106 short chain dehydrogenase NW98_RS22100 PF00654 Voltage gated chloride channel NW98_RS22115 PF00034 Cytochrome c NW98_RS22115 PF14376 Haem-binding domain NW98_RS22115 PF03150 Di-haem cytochrome c peroxidase NW98_RS22120 PF04185 Phosphoesterase family NW98_RS22120 PF05506 Domain of unknown function (DUF756) NW98_RS22145 PF00072 Response regulator receiver domain NW98_RS22145 PF00196 Bacterial regulatory proteins, luxR family NW98_RS22175 PF01047 MarR family NW98_RS22190 PF08450 SMP-30/Gluconolactonase/LRE-like region NW98_RS22225 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS22230 PF00171 Aldehyde dehydrogenase family NW98_RS22240 PF07690 Major Facilitator Superfamily NW98_RS22255 PF13609 Gram-negative porin NW98_RS22260 PF07519 Tannase and feruloyl esterase NW98_RS22280 PF00005 ABC transporter NW98_RS22285 PF02653 Branched-chain amino acid transport system / permease component NW98_RS22295 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus NW98_RS22295 PF08666 SAF domain NW98_RS22315 PF01557 Fumarylacetoacetate (FAA) hydrolase family NW98_RS22380 PF03895 YadA-like membrane anchor domain NW98_RS22380 PF05658 Head domain of trimeric autotransporter adhesin NW98_RS22380 PF05658 Head domain of trimeric autotransporter adhesin NW98_RS22380 PF13018 Extended Signal Peptide of Type V secretion system NW98_RS22380 PF03895 YadA-like membrane anchor domain NW98_RS22380 PF05662 Coiled stalk of trimeric autotransporter adhesin NW98_RS22380 PF13018 Extended Signal Peptide of Type V secretion system NW98_RS22380 PF05662 Coiled stalk of trimeric autotransporter adhesin NW98_RS22390 PF00816 H-NS histone family NW98_RS22395 PF09339 IclR helix-turn-helix domain NW98_RS22395 PF01614 Bacterial transcriptional regulator NW98_RS22435 PF13458 Periplasmic binding protein NW98_RS22445 PF03006 Haemolysin-III related NW98_RS22455 PF00990 Diguanylate cyclase, GGDEF domain NW98_RS22455 PF03707 Bacterial signalling protein N terminal repeat NW98_RS22455 PF00563 EAL domain NW98_RS22465 PF01037 Lrp/AsnC ligand binding domain NW98_RS22475 PF00324 Amino acid permease NW98_RS22480 PF00155 Aminotransferase class I and II NW98_RS22535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS22535 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS22535 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS22540 PF00072 Response regulator receiver domain NW98_RS22540 PF01339 CheB methylesterase NW98_RS22555 PF01835 MG2 domain NW98_RS22555 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NW98_RS22555 PF00207 Alpha-2-macroglobulin family NW98_RS22555 PF07703 Alpha-2-macroglobulin bait region domain NW98_RS22590 PF17284 Spermidine synthase tetramerisation domain NW98_RS22605 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NW98_RS22610 PF00398 Ribosomal RNA adenine dimethylase NW98_RS22630 PF01752 Collagenase NW98_RS22630 PF08453 Peptidase family M9 N-terminal NW98_RS22645 PF01494 FAD binding domain NW98_RS22685 PF00072 Response regulator receiver domain NW98_RS22685 PF00196 Bacterial regulatory proteins, luxR family NW98_RS22710 PF00582 Universal stress protein family NW98_RS22720 PF00107 Zinc-binding dehydrogenase NW98_RS22720 PF13823 Alcohol dehydrogenase GroES-associated NW98_RS22720 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS22745 PF00106 short chain dehydrogenase NW98_RS22760 PF00324 Amino acid permease NW98_RS22775 PF00816 H-NS histone family NW98_RS22820 PF01261 Xylose isomerase-like TIM barrel NW98_RS22820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NW98_RS22830 PF01220 Dehydroquinase class II NW98_RS22835 PF08501 Shikimate dehydrogenase substrate binding domain NW98_RS22835 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NW98_RS22840 PF07690 Major Facilitator Superfamily NW98_RS22845 PF00266 Aminotransferase class-V NW98_RS22860 PF00005 ABC transporter NW98_RS22860 PF08402 TOBE domain NW98_RS22865 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS22870 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS22875 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase NW98_RS22880 PF00171 Aldehyde dehydrogenase family NW98_RS22885 PF01966 HD domain NW98_RS22955 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NW98_RS22960 PF00248 Aldo/keto reductase family NW98_RS22975 PF00155 Aminotransferase class I and II NW98_RS22980 PF17757 UvrB interaction domain NW98_RS22980 PF02151 UvrB/uvrC motif NW98_RS22980 PF12344 Ultra-violet resistance protein B NW98_RS22980 PF04851 Type III restriction enzyme, res subunit NW98_RS22980 PF00271 Helicase conserved C-terminal domain NW98_RS22985 PF10634 Fe2+ transport protein NW98_RS22990 PF13473 Cupredoxin-like domain NW98_RS22995 PF03239 Iron permease FTR1 family NW98_RS23000 PF12801 4Fe-4S binding domain NW98_RS23000 PF04205 FMN-binding domain NW98_RS23005 PF03928 Haem-degrading NW98_RS23055 PF03466 LysR substrate binding domain NW98_RS23055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS23075 PF00248 Aldo/keto reductase family NW98_RS23085 PF17409 MoaF C-terminal domain NW98_RS23085 PF10703 MoaF N-terminal domain NW98_RS23095 PF00196 Bacterial regulatory proteins, luxR family NW98_RS23100 PF00171 Aldehyde dehydrogenase family NW98_RS23105 PF00202 Aminotransferase class-III NW98_RS23110 PF13520 Amino acid permease NW98_RS23125 PF13609 Gram-negative porin NW98_RS23140 PF00583 Acetyltransferase (GNAT) family NW98_RS23145 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NW98_RS23160 PF13609 Gram-negative porin NW98_RS23165 PF03449 Transcription elongation factor, N-terminal NW98_RS23165 PF01272 Transcription elongation factor, GreA/GreB, C-term NW98_RS23180 PF00478 IMP dehydrogenase / GMP reductase domain NW98_RS23180 PF00571 CBS domain NW98_RS23185 PF00925 GTP cyclohydrolase II NW98_RS23195 PF00765 Autoinducer synthase NW98_RS23210 PF03472 Autoinducer binding domain NW98_RS23210 PF00196 Bacterial regulatory proteins, luxR family NW98_RS23215 PF02308 MgtC family NW98_RS23225 PF00149 Calcineurin-like phosphoesterase NW98_RS23230 PF00881 Nitroreductase family NW98_RS23240 PF09339 IclR helix-turn-helix domain NW98_RS23240 PF01614 Bacterial transcriptional regulator NW98_RS23245 PF13609 Gram-negative porin NW98_RS23255 PF00355 Rieske [2Fe-2S] domain NW98_RS23265 PF00355 Rieske [2Fe-2S] domain NW98_RS23280 PF12697 Alpha/beta hydrolase family NW98_RS23285 PF01614 Bacterial transcriptional regulator NW98_RS23285 PF09339 IclR helix-turn-helix domain NW98_RS23295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW98_RS23295 PF00205 Thiamine pyrophosphate enzyme, central domain NW98_RS23295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW98_RS23300 PF03447 Homoserine dehydrogenase, NAD binding domain NW98_RS23300 PF01958 Domain of unknown function DUF108 NW98_RS23305 PF00171 Aldehyde dehydrogenase family NW98_RS23315 PF14759 Reductase C-terminal NW98_RS23315 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS23320 PF00083 Sugar (and other) transporter NW98_RS23330 PF13018 Extended Signal Peptide of Type V secretion system NW98_RS23330 PF03895 YadA-like membrane anchor domain NW98_RS23330 PF05662 Coiled stalk of trimeric autotransporter adhesin NW98_RS23330 PF05658 Head domain of trimeric autotransporter adhesin NW98_RS23335 PF00691 OmpA family NW98_RS23335 PF01389 OmpA-like transmembrane domain NW98_RS23350 PF01425 Amidase NW98_RS23360 PF01037 Lrp/AsnC ligand binding domain NW98_RS23410 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS23415 PF13276 HTH-like domain NW98_RS23415 PF00665 Integrase core domain NW98_RS23415 PF13333 Integrase core domain NW98_RS23425 PF07690 Major Facilitator Superfamily NW98_RS23435 PF00561 alpha/beta hydrolase fold NW98_RS23445 PF00106 short chain dehydrogenase NW98_RS23450 PF00743 Flavin-binding monooxygenase-like NW98_RS23455 PF07947 YhhN family NW98_RS23465 PF09084 NMT1/THI5 like NW98_RS23485 PF07690 Major Facilitator Superfamily NW98_RS23490 PF00672 HAMP domain NW98_RS23490 PF02203 Tar ligand binding domain homologue NW98_RS23490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS23495 PF02203 Tar ligand binding domain homologue NW98_RS23495 PF00672 HAMP domain NW98_RS23495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS23525 PF02254 TrkA-N domain NW98_RS23525 PF07885 Ion channel NW98_RS23530 PF00561 alpha/beta hydrolase fold NW98_RS23550 PF02423 Ornithine cyclodeaminase/mu-crystallin family NW98_RS23555 PF00756 Putative esterase NW98_RS23575 PF13609 Gram-negative porin NW98_RS23595 PF01551 Peptidase family M23 NW98_RS23595 PF01476 LysM domain NW98_RS23615 PF03466 LysR substrate binding domain NW98_RS23615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS23630 PF00005 ABC transporter NW98_RS23630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW98_RS23635 PF00005 ABC transporter NW98_RS23635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW98_RS23640 PF12911 N-terminal TM domain of oligopeptide transport permease C NW98_RS23640 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS23645 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS23650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW98_RS23655 PF01427 D-ala-D-ala dipeptidase NW98_RS23680 PF04717 Type VI secretion system, phage-baseplate injector NW98_RS23680 PF06715 Gp5 C-terminal repeat (3 copies) NW98_RS23690 PF05593 RHS Repeat NW98_RS23690 PF03527 RHS protein NW98_RS23710 PF03797 Autotransporter beta-domain NW98_RS23710 PF00082 Subtilase family NW98_RS23710 PF12951 Passenger-associated-transport-repeat NW98_RS23725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW98_RS23735 PF00190 Cupin NW98_RS23740 PF01566 Natural resistance-associated macrophage protein NW98_RS23750 PF05360 yiaA/B two helix domain NW98_RS23755 PF01062 Bestrophin, RFP-TM, chloride channel NW98_RS23760 PF00384 Molybdopterin oxidoreductase NW98_RS23765 PF00392 Bacterial regulatory proteins, gntR family NW98_RS23765 PF00155 Aminotransferase class I and II NW98_RS23780 PF00689 Cation transporting ATPase, C-terminus NW98_RS23780 PF00690 Cation transporter/ATPase, N-terminus NW98_RS23790 PF00082 Subtilase family NW98_RS23790 PF04151 Bacterial pre-peptidase C-terminal domain NW98_RS23805 PF05199 GMC oxidoreductase NW98_RS23805 PF00732 GMC oxidoreductase NW98_RS23810 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NW98_RS23810 PF00034 Cytochrome c NW98_RS23815 PF07681 DoxX NW98_RS23820 PF13609 Gram-negative porin NW98_RS23825 PF10997 Alternate to MurJ NW98_RS23835 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS23840 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS23845 PF00005 ABC transporter NW98_RS23850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NW98_RS23915 PF07694 5TMR of 5TMR-LYT NW98_RS23915 PF06580 Histidine kinase NW98_RS23925 PF00072 Response regulator receiver domain NW98_RS23925 PF04397 LytTr DNA-binding domain NW98_RS23930 PF04397 LytTr DNA-binding domain NW98_RS23930 PF00072 Response regulator receiver domain NW98_RS23950 PF10119 Predicted methyltransferase regulatory domain NW98_RS23950 PF13847 Methyltransferase domain NW98_RS23955 PF12833 Helix-turn-helix domain NW98_RS23975 PF02801 Beta-ketoacyl synthase, C-terminal domain NW98_RS23975 PF00109 Beta-ketoacyl synthase, N-terminal domain NW98_RS23980 PF00550 Phosphopantetheine attachment site NW98_RS23985 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS23990 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS24000 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS24000 PF01610 Transposase NW98_RS24000 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS24010 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal NW98_RS24010 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal NW98_RS24035 PF03060 Nitronate monooxygenase NW98_RS24035 PF00698 Acyl transferase domain NW98_RS24040 PF00999 Sodium/hydrogen exchanger family NW98_RS24040 PF02080 TrkA-C domain NW98_RS24040 PF02254 TrkA-N domain NW98_RS24065 PF08659 KR domain NW98_RS24065 PF00550 Phosphopantetheine attachment site NW98_RS24065 PF16197 Ketoacyl-synthetase C-terminal extension NW98_RS24065 PF02801 Beta-ketoacyl synthase, C-terminal domain NW98_RS24065 PF14765 Polyketide synthase dehydratase NW98_RS24065 PF00109 Beta-ketoacyl synthase, N-terminal domain NW98_RS24070 PF01494 FAD binding domain NW98_RS24075 PF07690 Major Facilitator Superfamily NW98_RS24080 PF00654 Voltage gated chloride channel NW98_RS24100 PF03466 LysR substrate binding domain NW98_RS24100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS24110 PF01699 Sodium/calcium exchanger protein NW98_RS24135 PF01557 Fumarylacetoacetate (FAA) hydrolase family NW98_RS24155 PF04542 Sigma-70 region 2 NW98_RS24155 PF08281 Sigma-70, region 4 NW98_RS24165 PF04264 YceI-like domain NW98_RS24185 PF08281 Sigma-70, region 4 NW98_RS24185 PF04542 Sigma-70 region 2 NW98_RS24195 PF07715 TonB-dependent Receptor Plug Domain NW98_RS24200 PF02653 Branched-chain amino acid transport system / permease component NW98_RS24205 PF02653 Branched-chain amino acid transport system / permease component NW98_RS24210 PF00005 ABC transporter NW98_RS24245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS24245 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS24245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS24255 PF00083 Sugar (and other) transporter NW98_RS24290 PF00486 Transcriptional regulatory protein, C terminal NW98_RS24290 PF00072 Response regulator receiver domain NW98_RS24295 PF00873 AcrB/AcrD/AcrF family NW98_RS24300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS24300 PF00529 HlyD membrane-fusion protein of T1SS NW98_RS24305 PF02321 Outer membrane efflux protein NW98_RS24345 PF13520 Amino acid permease NW98_RS24360 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS24360 PF01434 Peptidase family M41 NW98_RS24360 PF17862 AAA+ lid domain NW98_RS24375 PF07969 Amidohydrolase family NW98_RS24385 PF13533 Biotin-lipoyl like NW98_RS24390 PF00873 AcrB/AcrD/AcrF family NW98_RS24395 PF02321 Outer membrane efflux protein NW98_RS24405 PF00925 GTP cyclohydrolase II NW98_RS24420 PF00589 Phage integrase family NW98_RS24420 PF02899 Phage integrase, N-terminal SAM-like domain NW98_RS24435 PF03717 Penicillin-binding Protein dimerisation domain NW98_RS24435 PF00905 Penicillin binding protein transpeptidase domain NW98_RS24445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family NW98_RS24455 PF00999 Sodium/hydrogen exchanger family NW98_RS24455 PF02254 TrkA-N domain NW98_RS24510 PF00455 DeoR C terminal sensor domain NW98_RS24510 PF08220 DeoR-like helix-turn-helix domain NW98_RS24515 PF07690 Major Facilitator Superfamily NW98_RS24550 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS24555 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS24560 PF00107 Zinc-binding dehydrogenase NW98_RS24560 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS24565 PF00005 ABC transporter NW98_RS24565 PF08402 TOBE domain NW98_RS24575 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NW98_RS24575 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NW98_RS24585 PF07943 Penicillin-binding protein 5, C-terminal domain NW98_RS24585 PF00768 D-alanyl-D-alanine carboxypeptidase NW98_RS24590 PF03717 Penicillin-binding Protein dimerisation domain NW98_RS24590 PF00905 Penicillin binding protein transpeptidase domain NW98_RS24600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NW98_RS24600 PF00384 Molybdopterin oxidoreductase NW98_RS24600 PF01568 Molydopterin dinucleotide binding domain NW98_RS24605 PF13806 Rieske-like [2Fe-2S] domain NW98_RS24610 PF18267 Rubredoxin NAD+ reductase C-terminal domain NW98_RS24610 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS24610 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NW98_RS24610 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NW98_RS24610 PF04324 BFD-like [2Fe-2S] binding domain NW98_RS24630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NW98_RS24635 PF08376 Nitrate and nitrite sensing NW98_RS24635 PF03861 ANTAR domain NW98_RS24640 PF00005 ABC transporter NW98_RS24650 PF01227 GTP cyclohydrolase I NW98_RS24680 PF00850 Histone deacetylase domain NW98_RS24685 PF01546 Peptidase family M20/M25/M40 NW98_RS24685 PF07687 Peptidase dimerisation domain NW98_RS24690 PF07690 Major Facilitator Superfamily NW98_RS24690 PF00083 Sugar (and other) transporter NW98_RS24725 PF02515 CoA-transferase family III NW98_RS24745 PF16884 N-terminal domain of oxidoreductase NW98_RS24745 PF00107 Zinc-binding dehydrogenase NW98_RS24750 PF00465 Iron-containing alcohol dehydrogenase NW98_RS24815 PF13193 AMP-binding enzyme C-terminal domain NW98_RS24815 PF00550 Phosphopantetheine attachment site NW98_RS24815 PF00668 Condensation domain NW98_RS24815 PF00975 Thioesterase domain NW98_RS24815 PF00501 AMP-binding enzyme NW98_RS24820 PF03621 MbtH-like protein NW98_RS24825 PF07690 Major Facilitator Superfamily NW98_RS24830 PF00550 Phosphopantetheine attachment site NW98_RS24830 PF02801 Beta-ketoacyl synthase, C-terminal domain NW98_RS24830 PF00109 Beta-ketoacyl synthase, N-terminal domain NW98_RS24830 PF08242 Methyltransferase domain NW98_RS24830 PF16197 Ketoacyl-synthetase C-terminal extension NW98_RS24830 PF14765 Polyketide synthase dehydratase NW98_RS24830 PF00975 Thioesterase domain NW98_RS24855 PF13520 Amino acid permease NW98_RS24875 PF00793 DAHP synthetase I family NW98_RS24880 PF01596 O-methyltransferase NW98_RS24890 PF01590 GAF domain NW98_RS24890 PF00563 EAL domain NW98_RS24890 PF00360 Phytochrome region NW98_RS24890 PF00990 Diguanylate cyclase, GGDEF domain NW98_RS24905 PF03466 LysR substrate binding domain NW98_RS24905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS24910 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NW98_RS24910 PF00775 Dioxygenase NW98_RS24930 PF03576 Peptidase family S58 NW98_RS24935 PF12911 N-terminal TM domain of oligopeptide transport permease C NW98_RS24935 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS24940 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS24945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW98_RS24955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW98_RS24955 PF00005 ABC transporter NW98_RS24960 PF01112 Asparaginase NW98_RS24970 PF02028 BCCT, betaine/carnitine/choline family transporter NW98_RS24975 PF00144 Beta-lactamase NW98_RS24985 PF04185 Phosphoesterase family NW98_RS25015 PF08264 Anticodon-binding domain of tRNA NW98_RS25015 PF00133 tRNA synthetases class I (I, L, M and V) NW98_RS25025 PF02272 DHHA1 domain NW98_RS25025 PF01411 tRNA synthetases class II (A) NW98_RS25025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NW98_RS25035 PF02913 FAD linked oxidases, C-terminal domain NW98_RS25035 PF01565 FAD binding domain NW98_RS25060 PF12852 Cupin NW98_RS25060 PF12833 Helix-turn-helix domain NW98_RS25070 PF00291 Pyridoxal-phosphate dependent enzyme NW98_RS25075 PF01037 Lrp/AsnC ligand binding domain NW98_RS25085 PF07690 Major Facilitator Superfamily NW98_RS25090 PF00392 Bacterial regulatory proteins, gntR family NW98_RS25090 PF07702 UTRA domain NW98_RS25095 PF07690 Major Facilitator Superfamily NW98_RS25100 PF04909 Amidohydrolase NW98_RS25110 PF03150 Di-haem cytochrome c peroxidase NW98_RS25115 PF04072 Leucine carboxyl methyltransferase NW98_RS25140 PF00583 Acetyltransferase (GNAT) family NW98_RS25150 PF04143 Sulphur transport NW98_RS25165 PF01292 Prokaryotic cytochrome b561 NW98_RS25175 PF00266 Aminotransferase class-V NW98_RS25190 PF00132 Bacterial transferase hexapeptide (six repeats) NW98_RS25205 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NW98_RS25205 PF00326 Prolyl oligopeptidase family NW98_RS25225 PF00529 HlyD membrane-fusion protein of T1SS NW98_RS25225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NW98_RS25245 PF00535 Glycosyl transferase family 2 NW98_RS25250 PF07690 Major Facilitator Superfamily NW98_RS25255 PF03033 Glycosyltransferase family 28 N-terminal domain NW98_RS25265 PF00561 alpha/beta hydrolase fold NW98_RS25275 PF00440 Bacterial regulatory proteins, tetR family NW98_RS25275 PF13977 BetI-type transcriptional repressor, C-terminal NW98_RS25280 PF00171 Aldehyde dehydrogenase family NW98_RS25285 PF05199 GMC oxidoreductase NW98_RS25285 PF00732 GMC oxidoreductase NW98_RS25310 PF07690 Major Facilitator Superfamily NW98_RS25315 PF07730 Histidine kinase NW98_RS25315 PF17200 Single Cache domain 2 NW98_RS25320 PF00072 Response regulator receiver domain NW98_RS25325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS25325 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS25325 PF01590 GAF domain NW98_RS25325 PF08446 PAS fold NW98_RS25325 PF00360 Phytochrome region NW98_RS25340 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NW98_RS25340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NW98_RS25370 PF00313 'Cold-shock' DNA-binding domain NW98_RS25385 PF01165 Ribosomal protein S21 NW98_RS25410 PF01571 Aminomethyltransferase folate-binding domain NW98_RS25410 PF08669 Glycine cleavage T-protein C-terminal barrel domain NW98_RS25410 PF17806 Sarcosine oxidase A3 domain NW98_RS25410 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS25425 PF00171 Aldehyde dehydrogenase family NW98_RS25435 PF00202 Aminotransferase class-III NW98_RS25440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS25440 PF03466 LysR substrate binding domain NW98_RS25510 PF00535 Glycosyl transferase family 2 NW98_RS25510 PF03552 Cellulose synthase NW98_RS25510 PF07238 PilZ domain NW98_RS25530 PF00501 AMP-binding enzyme NW98_RS25530 PF13193 AMP-binding enzyme C-terminal domain NW98_RS25535 PF00027 Cyclic nucleotide-binding domain NW98_RS25535 PF13545 Crp-like helix-turn-helix domain NW98_RS25560 PF00392 Bacterial regulatory proteins, gntR family NW98_RS25560 PF00155 Aminotransferase class I and II NW98_RS25570 PF00106 short chain dehydrogenase NW98_RS25580 PF01594 AI-2E family transporter NW98_RS25605 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NW98_RS25625 PF00440 Bacterial regulatory proteins, tetR family NW98_RS25625 PF16925 Tetracyclin repressor-like, C-terminal domain NW98_RS25655 PF08521 Two-component sensor kinase N-terminal NW98_RS25655 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS25655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS25660 PF00486 Transcriptional regulatory protein, C terminal NW98_RS25660 PF00072 Response regulator receiver domain NW98_RS25675 PF00005 ABC transporter NW98_RS25675 PF08402 TOBE domain NW98_RS25680 PF13609 Gram-negative porin NW98_RS25690 PF02311 AraC-like ligand binding domain NW98_RS25690 PF12833 Helix-turn-helix domain NW98_RS25700 PF01557 Fumarylacetoacetate (FAA) hydrolase family NW98_RS25710 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NW98_RS25715 PF00171 Aldehyde dehydrogenase family NW98_RS25720 PF01557 Fumarylacetoacetate (FAA) hydrolase family NW98_RS25725 PF01557 Fumarylacetoacetate (FAA) hydrolase family NW98_RS25730 PF01047 MarR family NW98_RS25745 PF00486 Transcriptional regulatory protein, C terminal NW98_RS25745 PF00072 Response regulator receiver domain NW98_RS25750 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS25750 PF00672 HAMP domain NW98_RS25750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS25760 PF00296 Luciferase-like monooxygenase NW98_RS25765 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS25765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS25770 PF08028 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS25770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS25805 PF06719 AraC-type transcriptional regulator N-terminus NW98_RS25805 PF12833 Helix-turn-helix domain NW98_RS25810 PF01799 [2Fe-2S] binding domain NW98_RS25810 PF00111 2Fe-2S iron-sulfur cluster binding domain NW98_RS25815 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NW98_RS25835 PF00733 Asparagine synthase NW98_RS25835 PF13537 Glutamine amidotransferase domain NW98_RS25865 PF00510 Cytochrome c oxidase subunit III NW98_RS25885 PF01204 Trehalase NW98_RS25895 PF07690 Major Facilitator Superfamily NW98_RS25905 PF06224 Winged helix DNA-binding domain NW98_RS25945 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NW98_RS25945 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NW98_RS25995 PF01965 DJ-1/PfpI family NW98_RS26000 PF00581 Rhodanese-like domain NW98_RS26025 PF00072 Response regulator receiver domain NW98_RS26025 PF00486 Transcriptional regulatory protein, C terminal NW98_RS26030 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS26030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS26030 PF08521 Two-component sensor kinase N-terminal NW98_RS26055 PF18029 Glyoxalase-like domain NW98_RS26090 PF00034 Cytochrome c NW98_RS26105 PF01734 Patatin-like phospholipase NW98_RS26110 PF00672 HAMP domain NW98_RS26110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS26110 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS26115 PF00072 Response regulator receiver domain NW98_RS26115 PF00486 Transcriptional regulatory protein, C terminal NW98_RS26125 PF04960 Glutaminase NW98_RS26145 PF13018 Extended Signal Peptide of Type V secretion system NW98_RS26145 PF05658 Head domain of trimeric autotransporter adhesin NW98_RS26145 PF05662 Coiled stalk of trimeric autotransporter adhesin NW98_RS26145 PF03895 YadA-like membrane anchor domain NW98_RS26170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NW98_RS26170 PF00364 Biotin-requiring enzyme NW98_RS26170 PF00289 Biotin carboxylase, N-terminal domain NW98_RS26170 PF02785 Biotin carboxylase C-terminal domain NW98_RS26180 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NW98_RS26180 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NW98_RS26180 PF00378 Enoyl-CoA hydratase/isomerase NW98_RS26185 PF01039 Carboxyl transferase domain NW98_RS26190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS26190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS26190 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS26215 PF00115 Cytochrome C and Quinol oxidase polypeptide I NW98_RS26220 PF07732 Multicopper oxidase NW98_RS26235 PF00355 Rieske [2Fe-2S] domain NW98_RS26235 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NW98_RS26285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS26285 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS26290 PF00072 Response regulator receiver domain NW98_RS26290 PF00486 Transcriptional regulatory protein, C terminal NW98_RS26315 PF02424 ApbE family NW98_RS26320 PF00171 Aldehyde dehydrogenase family NW98_RS26325 PF00155 Aminotransferase class I and II NW98_RS26340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS26340 PF03466 LysR substrate binding domain NW98_RS26355 PF01266 FAD dependent oxidoreductase NW98_RS26360 PF00440 Bacterial regulatory proteins, tetR family NW98_RS26380 PF00455 DeoR C terminal sensor domain NW98_RS26380 PF08220 DeoR-like helix-turn-helix domain NW98_RS26390 PF07690 Major Facilitator Superfamily NW98_RS26400 PF08125 Mannitol dehydrogenase C-terminal domain NW98_RS26400 PF01232 Mannitol dehydrogenase Rossmann domain NW98_RS26410 PF13378 Enolase C-terminal domain-like NW98_RS26410 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NW98_RS26415 PF00107 Zinc-binding dehydrogenase NW98_RS26415 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS26440 PF02540 NAD synthase NW98_RS26455 PF09370 Phosphoenolpyruvate hydrolase-like NW98_RS26470 PF07732 Multicopper oxidase NW98_RS26490 PF01510 N-acetylmuramoyl-L-alanine amidase NW98_RS26495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NW98_RS26500 PF03895 YadA-like membrane anchor domain NW98_RS26500 PF05658 Head domain of trimeric autotransporter adhesin NW98_RS26500 PF13018 Extended Signal Peptide of Type V secretion system NW98_RS26500 PF05662 Coiled stalk of trimeric autotransporter adhesin NW98_RS26515 PF00072 Response regulator receiver domain NW98_RS26515 PF00486 Transcriptional regulatory protein, C terminal NW98_RS26520 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS26520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS26535 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NW98_RS26560 PF10431 C-terminal, D2-small domain, of ClpB protein NW98_RS26560 PF17871 AAA lid domain NW98_RS26560 PF07724 AAA domain (Cdc48 subfamily) NW98_RS26560 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS26565 PF04717 Type VI secretion system, phage-baseplate injector NW98_RS26605 PF14331 ImcF-related N-terminal domain NW98_RS26605 PF06761 Intracellular multiplication and human macrophage-killing NW98_RS26605 PF06744 Type VI secretion protein IcmF C-terminal NW98_RS26635 PF01227 GTP cyclohydrolase I NW98_RS26660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS26660 PF03466 LysR substrate binding domain NW98_RS26665 PF02678 Pirin NW98_RS26665 PF05726 Pirin C-terminal cupin domain NW98_RS26675 PF10636 Hemin uptake protein hemP NW98_RS26700 PF01609 Transposase DDE domain NW98_RS26720 PF00072 Response regulator receiver domain NW98_RS26720 PF00196 Bacterial regulatory proteins, luxR family NW98_RS26730 PF09119 SicP binding NW98_RS26740 PF07487 SopE GEF domain NW98_RS26750 PF01464 Transglycosylase SLT domain NW98_RS26755 PF00550 Phosphopantetheine attachment site NW98_RS26765 PF06511 Type III secretion systems tip complex components NW98_RS26770 PF00816 H-NS histone family NW98_RS26775 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) NW98_RS26780 PF16535 Type III cell invasion protein SipB NW98_RS26780 PF04888 Secretion system effector C (SseC) like family NW98_RS26785 PF07720 Tetratricopeptide repeat NW98_RS26790 PF01312 FlhB HrpN YscU SpaS Family NW98_RS26795 PF01311 Bacterial export proteins, family 1 NW98_RS26800 PF01313 Bacterial export proteins, family 3 NW98_RS26805 PF00813 FliP family NW98_RS26825 PF02874 ATP synthase alpha/beta family, beta-barrel domain NW98_RS26825 PF18269 T3SS EscN ATPase C-terminal domain NW98_RS26825 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW98_RS26835 PF00771 FHIPEP family NW98_RS26840 PF07201 HrpJ-like domain NW98_RS26845 PF00263 Bacterial type II and III secretion system protein NW98_RS26845 PF03958 Bacterial type II/III secretion system short domain NW98_RS26860 PF09480 Type III secretion system protein PrgH-EprH (PrgH) NW98_RS26865 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF NW98_RS26875 PF01514 Secretory protein of YscJ/FliF family NW98_RS26920 PF07504 Fungalysin/Thermolysin Propeptide Motif NW98_RS26920 PF01483 Proprotein convertase P-domain NW98_RS26920 PF01447 Thermolysin metallopeptidase, catalytic domain NW98_RS26920 PF02868 Thermolysin metallopeptidase, alpha-helical domain NW98_RS26950 PF00083 Sugar (and other) transporter NW98_RS26960 PF01070 FMN-dependent dehydrogenase NW98_RS26975 PF09286 Pro-kumamolisin, activation domain NW98_RS26975 PF00082 Subtilase family NW98_RS26980 PF01810 LysE type translocator NW98_RS26985 PF01037 Lrp/AsnC ligand binding domain NW98_RS27000 PF01384 Phosphate transporter family NW98_RS27010 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA NW98_RS27025 PF13193 AMP-binding enzyme C-terminal domain NW98_RS27025 PF00501 AMP-binding enzyme NW98_RS27050 PF00765 Autoinducer synthase NW98_RS27055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NW98_RS27055 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS27065 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS27070 PF00005 ABC transporter NW98_RS27075 PF04069 Substrate binding domain of ABC-type glycine betaine transport system NW98_RS27080 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NW98_RS27090 PF11658 Cellulose biosynthesis protein BcsG NW98_RS27095 PF07238 PilZ domain NW98_RS27095 PF00535 Glycosyl transferase family 2 NW98_RS27095 PF03552 Cellulose synthase NW98_RS27115 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) NW98_RS27120 PF01270 Glycosyl hydrolases family 8 NW98_RS27125 PF03170 Bacterial cellulose synthase subunit NW98_RS27140 PF07804 HipA-like C-terminal domain NW98_RS27140 PF13657 HipA N-terminal domain NW98_RS27160 PF03466 LysR substrate binding domain NW98_RS27160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS27165 PF00491 Arginase family NW98_RS27210 PF00263 Bacterial type II and III secretion system protein NW98_RS27210 PF03958 Bacterial type II/III secretion system short domain NW98_RS27235 PF00437 Type II/IV secretion system protein NW98_RS27250 PF07655 Secretin N-terminal domain NW98_RS27250 PF00263 Bacterial type II and III secretion system protein NW98_RS27265 PF00437 Type II/IV secretion system protein NW98_RS27270 PF03958 Bacterial type II/III secretion system short domain NW98_RS27270 PF00263 Bacterial type II and III secretion system protein NW98_RS27275 PF00486 Transcriptional regulatory protein, C terminal NW98_RS27275 PF00072 Response regulator receiver domain NW98_RS27315 PF12833 Helix-turn-helix domain NW98_RS27350 PF01313 Bacterial export proteins, family 3 NW98_RS27355 PF00813 FliP family NW98_RS27365 PF00771 FHIPEP family NW98_RS27370 PF01312 FlhB HrpN YscU SpaS Family NW98_RS27405 PF18269 T3SS EscN ATPase C-terminal domain NW98_RS27405 PF02874 ATP synthase alpha/beta family, beta-barrel domain NW98_RS27405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NW98_RS27415 PF01311 Bacterial export proteins, family 1 NW98_RS27440 PF00550 Phosphopantetheine attachment site NW98_RS27440 PF00668 Condensation domain NW98_RS27440 PF00501 AMP-binding enzyme NW98_RS27440 PF13193 AMP-binding enzyme C-terminal domain NW98_RS27450 PF00501 AMP-binding enzyme NW98_RS27450 PF00550 Phosphopantetheine attachment site NW98_RS27450 PF13193 AMP-binding enzyme C-terminal domain NW98_RS27450 PF00975 Thioesterase domain NW98_RS27450 PF00668 Condensation domain NW98_RS27460 PF00202 Aminotransferase class-III NW98_RS27480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW98_RS27480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW98_RS27480 PF00205 Thiamine pyrophosphate enzyme, central domain NW98_RS27485 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain NW98_RS27485 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain NW98_RS27490 PF01575 MaoC like domain NW98_RS27495 PF03328 HpcH/HpaI aldolase/citrate lyase family NW98_RS27500 PF03466 LysR substrate binding domain NW98_RS27500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS27515 PF03466 LysR substrate binding domain NW98_RS27515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS27520 PF07690 Major Facilitator Superfamily NW98_RS27530 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS27530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS27540 PF02954 Bacterial regulatory protein, Fis family NW98_RS27540 PF00072 Response regulator receiver domain NW98_RS27540 PF00158 Sigma-54 interaction domain NW98_RS27570 PF01734 Patatin-like phospholipase NW98_RS27585 PF00067 Cytochrome P450 NW98_RS27610 PF00933 Glycosyl hydrolase family 3 N terminal domain NW98_RS27610 PF14310 Fibronectin type III-like domain NW98_RS27610 PF01915 Glycosyl hydrolase family 3 C-terminal domain NW98_RS27615 PF14310 Fibronectin type III-like domain NW98_RS27615 PF00933 Glycosyl hydrolase family 3 N terminal domain NW98_RS27615 PF01915 Glycosyl hydrolase family 3 C-terminal domain NW98_RS27625 PF01425 Amidase NW98_RS27645 PF09107 Elongation factor SelB, winged helix NW98_RS27645 PF00009 Elongation factor Tu GTP binding domain NW98_RS27645 PF03144 Elongation factor Tu domain 2 NW98_RS27645 PF09106 Elongation factor SelB, winged helix NW98_RS27650 PF03841 L-seryl-tRNA selenium transferase NW98_RS27650 PF12390 Selenocysteine synthase N terminal NW98_RS27655 PF04216 Protein involved in formate dehydrogenase formation NW98_RS27660 PF01292 Prokaryotic cytochrome b561 NW98_RS27665 PF09163 Formate dehydrogenase N, transmembrane NW98_RS27665 PF13247 4Fe-4S dicluster domain NW98_RS27690 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS27700 PF00005 ABC transporter NW98_RS27705 PF00296 Luciferase-like monooxygenase NW98_RS27710 PF00296 Luciferase-like monooxygenase NW98_RS27720 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS27740 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family NW98_RS27760 PF03631 Virulence factor BrkB NW98_RS27765 PF13609 Gram-negative porin NW98_RS27785 PF01757 Acyltransferase family NW98_RS27795 PF00483 Nucleotidyl transferase NW98_RS27810 PF00534 Glycosyl transferases group 1 NW98_RS27810 PF13439 Glycosyltransferase Family 4 NW98_RS27815 PF01943 Polysaccharide biosynthesis protein NW98_RS27815 PF14667 Polysaccharide biosynthesis C-terminal domain NW98_RS27830 PF01757 Acyltransferase family NW98_RS27835 PF16363 GDP-mannose 4,6 dehydratase NW98_RS27855 PF01053 Cys/Met metabolism PLP-dependent enzyme NW98_RS27865 PF00156 Phosphoribosyl transferase domain NW98_RS27880 PF08245 Mur ligase middle domain NW98_RS27880 PF02875 Mur ligase family, glutamate ligase domain NW98_RS27885 PF17848 Acetyl-coA carboxylase zinc finger domain NW98_RS27885 PF01039 Carboxyl transferase domain NW98_RS27890 PF00290 Tryptophan synthase alpha chain NW98_RS27895 PF01555 DNA methylase NW98_RS27900 PF00291 Pyridoxal-phosphate dependent enzyme NW98_RS27905 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NW98_RS27910 PF01416 tRNA pseudouridine synthase NW98_RS27925 PF01118 Semialdehyde dehydrogenase, NAD binding domain NW98_RS27925 PF02774 Semialdehyde dehydrogenase, dimerisation domain NW98_RS27935 PF00180 Isocitrate/isopropylmalate dehydrogenase NW98_RS27940 PF00694 Aconitase C-terminal domain NW98_RS27950 PF00330 Aconitase family (aconitate hydratase) NW98_RS27960 PF00296 Luciferase-like monooxygenase NW98_RS27985 PF01037 Lrp/AsnC ligand binding domain NW98_RS27990 PF17831 Pyruvate dehydrogenase E1 component middle domain NW98_RS27990 PF00456 Transketolase, thiamine diphosphate binding domain NW98_RS27995 PF07350 Protein of unknown function (DUF1479) NW98_RS28030 PF00285 Citrate synthase, C-terminal domain NW98_RS28035 PF03937 Flavinator of succinate dehydrogenase NW98_RS28040 PF13085 2Fe-2S iron-sulfur cluster binding domain NW98_RS28045 PF00890 FAD binding domain NW98_RS28045 PF02910 Fumarate reductase flavoprotein C-term NW98_RS28055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NW98_RS28065 PF00392 Bacterial regulatory proteins, gntR family NW98_RS28065 PF07702 UTRA domain NW98_RS28070 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NW98_RS28070 PF00056 lactate/malate dehydrogenase, NAD binding domain NW98_RS28085 PF03972 MmgE/PrpD family NW98_RS28090 PF00694 Aconitase C-terminal domain NW98_RS28090 PF00330 Aconitase family (aconitate hydratase) NW98_RS28095 PF05594 Haemagluttinin repeat NW98_RS28095 PF13018 Extended Signal Peptide of Type V secretion system NW98_RS28095 PF05860 haemagglutination activity domain NW98_RS28095 PF13332 Hemagglutinin repeat NW98_RS28100 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB NW98_RS28100 PF08479 POTRA domain, ShlB-type NW98_RS28100 PF17287 POTRA domain NW98_RS28125 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS28135 PF00005 ABC transporter NW98_RS28135 PF08402 TOBE domain NW98_RS28140 PF00392 Bacterial regulatory proteins, gntR family NW98_RS28140 PF00155 Aminotransferase class I and II NW98_RS28155 PF07715 TonB-dependent Receptor Plug Domain NW98_RS28155 PF00593 TonB dependent receptor NW98_RS28165 PF01292 Prokaryotic cytochrome b561 NW98_RS28175 PF01476 LysM domain NW98_RS28175 PF01551 Peptidase family M23 NW98_RS28190 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NW98_RS28190 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NW98_RS28210 PF02146 Sir2 family NW98_RS28215 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin NW98_RS28245 PF06715 Gp5 C-terminal repeat (3 copies) NW98_RS28245 PF04717 Type VI secretion system, phage-baseplate injector NW98_RS28250 PF00004 ATPase family associated with various cellular activities (AAA) NW98_RS28250 PF07724 AAA domain (Cdc48 subfamily) NW98_RS28250 PF17871 AAA lid domain NW98_RS28250 PF10431 C-terminal, D2-small domain, of ClpB protein NW98_RS28260 PF05947 Type VI secretion system, TssF NW98_RS28265 PF04965 Gene 25-like lysozyme NW98_RS28270 PF05638 Type VI secretion system effector, Hcp NW98_RS28275 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NW98_RS28280 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 NW98_RS28305 PF06761 Intracellular multiplication and human macrophage-killing NW98_RS28305 PF14331 ImcF-related N-terminal domain NW98_RS28305 PF06744 Type VI secretion protein IcmF C-terminal NW98_RS28310 PF13677 Membrane MotB of proton-channel complex MotA/MotB NW98_RS28310 PF00691 OmpA family NW98_RS28315 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NW98_RS28350 PF01494 FAD binding domain NW98_RS28355 PF04345 Chorismate lyase NW98_RS28360 PF04345 Chorismate lyase NW98_RS28380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS28380 PF03466 LysR substrate binding domain NW98_RS28390 PF03466 LysR substrate binding domain NW98_RS28390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS28405 PF00581 Rhodanese-like domain NW98_RS28410 PF00753 Metallo-beta-lactamase superfamily NW98_RS28415 PF07690 Major Facilitator Superfamily NW98_RS28420 PF00266 Aminotransferase class-V NW98_RS28435 PF00083 Sugar (and other) transporter NW98_RS28435 PF07690 Major Facilitator Superfamily NW98_RS28445 PF03466 LysR substrate binding domain NW98_RS28445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS28450 PF01070 FMN-dependent dehydrogenase NW98_RS28455 PF01557 Fumarylacetoacetate (FAA) hydrolase family NW98_RS28475 PF01425 Amidase NW98_RS28485 PF13380 CoA binding domain NW98_RS28485 PF00583 Acetyltransferase (GNAT) family NW98_RS28485 PF13607 Succinyl-CoA ligase like flavodoxin domain NW98_RS28500 PF00816 H-NS histone family NW98_RS28515 PF00158 Sigma-54 interaction domain NW98_RS28515 PF02954 Bacterial regulatory protein, Fis family NW98_RS28515 PF13185 GAF domain NW98_RS28550 PF03573 outer membrane porin, OprD family NW98_RS28555 PF00005 ABC transporter NW98_RS28555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW98_RS28560 PF00005 ABC transporter NW98_RS28560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region NW98_RS28565 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS28565 PF12911 N-terminal TM domain of oligopeptide transport permease C NW98_RS28570 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS28575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle NW98_RS28580 PF01381 Helix-turn-helix NW98_RS28580 PF07883 Cupin domain NW98_RS28595 PF00854 POT family NW98_RS28610 PF03466 LysR substrate binding domain NW98_RS28610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS28640 PF04542 Sigma-70 region 2 NW98_RS28640 PF04539 Sigma-70 region 3 NW98_RS28640 PF04546 Sigma-70, non-essential region NW98_RS28640 PF04545 Sigma-70, region 4 NW98_RS28640 PF00140 Sigma-70 factor, region 1.2 NW98_RS28640 PF03979 Sigma-70 factor, region 1.1 NW98_RS28650 PF10410 DnaB-helicase binding domain of primase NW98_RS28650 PF08278 DNA primase DnaG DnaB-binding NW98_RS28650 PF01807 CHC2 zinc finger NW98_RS28650 PF08275 DNA primase catalytic core, N-terminal domain NW98_RS28660 PF01165 Ribosomal protein S21 NW98_RS28670 PF00814 Glycoprotease family NW98_RS28680 PF02649 Type I GTP cyclohydrolase folE2 NW98_RS28685 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NW98_RS28685 PF02779 Transketolase, pyrimidine binding domain NW98_RS28685 PF02780 Transketolase, C-terminal domain NW98_RS28690 PF00348 Polyprenyl synthetase NW98_RS28695 PF02609 Exonuclease VII small subunit NW98_RS28715 PF01738 Dienelactone hydrolase family NW98_RS28735 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS28740 PF01367 5'-3' exonuclease, C-terminal SAM fold NW98_RS28740 PF01612 3'-5' exonuclease NW98_RS28740 PF00476 DNA polymerase family A NW98_RS28740 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NW98_RS28745 PF03641 Possible lysine decarboxylase NW98_RS28765 PF04463 Protein of unknown function (DUF523) NW98_RS28815 PF01048 Phosphorylase superfamily NW98_RS28815 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus NW98_RS28825 PF01636 Phosphotransferase enzyme family NW98_RS28840 PF01047 MarR family NW98_RS28845 PF02566 OsmC-like protein NW98_RS28860 PF01569 PAP2 superfamily NW98_RS28870 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS28875 PF00005 ABC transporter NW98_RS28875 PF03459 TOBE domain NW98_RS28890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS28890 PF03459 TOBE domain NW98_RS28905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS28905 PF03466 LysR substrate binding domain NW98_RS28920 PF03471 Transporter associated domain NW98_RS28920 PF01595 Cyclin M transmembrane N-terminal domain NW98_RS28920 PF00571 CBS domain NW98_RS28925 PF02581 Thiamine monophosphate synthase NW98_RS28930 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NW98_RS28930 PF00128 Alpha amylase, catalytic domain NW98_RS28930 PF02806 Alpha amylase, C-terminal all-beta domain NW98_RS28950 PF01070 FMN-dependent dehydrogenase NW98_RS28990 PF02397 Bacterial sugar transferase NW98_RS29020 PF13183 4Fe-4S dicluster domain NW98_RS29020 PF02754 Cysteine-rich domain NW98_RS29025 PF02915 Rubrerythrin NW98_RS29035 PF01510 N-acetylmuramoyl-L-alanine amidase NW98_RS29050 PF08281 Sigma-70, region 4 NW98_RS29050 PF04542 Sigma-70 region 2 NW98_RS29060 PF03795 YCII-related domain NW98_RS29065 PF03795 YCII-related domain NW98_RS29100 PF01594 AI-2E family transporter NW98_RS29110 PF00593 TonB dependent receptor NW98_RS29110 PF07715 TonB-dependent Receptor Plug Domain NW98_RS29120 PF07690 Major Facilitator Superfamily NW98_RS29135 PF16884 N-terminal domain of oxidoreductase NW98_RS29135 PF00107 Zinc-binding dehydrogenase NW98_RS29175 PF02770 Acyl-CoA dehydrogenase, middle domain NW98_RS29175 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NW98_RS29175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NW98_RS29190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS29190 PF03466 LysR substrate binding domain NW98_RS29220 PF04261 Dyp-type peroxidase family NW98_RS29230 PF00664 ABC transporter transmembrane region NW98_RS29230 PF00005 ABC transporter NW98_RS29240 PF12833 Helix-turn-helix domain NW98_RS29240 PF01965 DJ-1/PfpI family NW98_RS29250 PF00579 tRNA synthetases class I (W and Y) NW98_RS29275 PF00654 Voltage gated chloride channel NW98_RS29290 PF00072 Response regulator receiver domain NW98_RS29290 PF01339 CheB methylesterase NW98_RS29295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS29295 PF00072 Response regulator receiver domain NW98_RS29295 PF01627 Hpt domain NW98_RS29295 PF01584 CheW-like domain NW98_RS29305 PF01739 CheR methyltransferase, SAM binding domain NW98_RS29315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NW98_RS29315 PF00672 HAMP domain NW98_RS29315 PF02743 Cache domain NW98_RS29320 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS29320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS29335 PF00171 Aldehyde dehydrogenase family NW98_RS29340 PF00205 Thiamine pyrophosphate enzyme, central domain NW98_RS29340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NW98_RS29340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NW98_RS29345 PF00999 Sodium/hydrogen exchanger family NW98_RS29365 PF13091 PLD-like domain NW98_RS29370 PF01230 HIT domain NW98_RS29375 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS29375 PF14759 Reductase C-terminal NW98_RS29380 PF00355 Rieske [2Fe-2S] domain NW98_RS29385 PF00866 Ring hydroxylating beta subunit NW98_RS29390 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NW98_RS29390 PF00355 Rieske [2Fe-2S] domain NW98_RS29395 PF12833 Helix-turn-helix domain NW98_RS29395 PF14525 AraC-binding-like domain NW98_RS29400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS29400 PF03466 LysR substrate binding domain NW98_RS29405 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NW98_RS29405 PF13378 Enolase C-terminal domain-like NW98_RS29410 PF00775 Dioxygenase NW98_RS29410 PF04444 Catechol dioxygenase N terminus NW98_RS29415 PF02426 Muconolactone delta-isomerase NW98_RS29420 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NW98_RS29425 PF00510 Cytochrome c oxidase subunit III NW98_RS29430 PF00115 Cytochrome C and Quinol oxidase polypeptide I NW98_RS29435 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NW98_RS29435 PF06481 COX Aromatic Rich Motif NW98_RS29445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NW98_RS29445 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS29450 PF12833 Helix-turn-helix domain NW98_RS29450 PF02311 AraC-like ligand binding domain NW98_RS29465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS29465 PF03466 LysR substrate binding domain NW98_RS29470 PF00355 Rieske [2Fe-2S] domain NW98_RS29470 PF00848 Ring hydroxylating alpha subunit (catalytic domain) NW98_RS29475 PF00866 Ring hydroxylating beta subunit NW98_RS29480 PF00175 Oxidoreductase NAD-binding domain NW98_RS29480 PF00970 Oxidoreductase FAD-binding domain NW98_RS29480 PF00111 2Fe-2S iron-sulfur cluster binding domain NW98_RS29485 PF00106 short chain dehydrogenase NW98_RS29505 PF00857 Isochorismatase family NW98_RS29540 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS29540 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS29540 PF01610 Transposase NW98_RS29585 PF03972 MmgE/PrpD family NW98_RS29605 PF00708 Acylphosphatase NW98_RS29610 PF01370 NAD dependent epimerase/dehydratase family NW98_RS29625 PF00535 Glycosyl transferase family 2 NW98_RS29635 PF02401 LytB protein NW98_RS29640 PF04055 Radical SAM superfamily NW98_RS29640 PF06463 Molybdenum Cofactor Synthesis C NW98_RS29660 PF00202 Aminotransferase class-III NW98_RS29715 PF00106 short chain dehydrogenase NW98_RS29725 PF13439 Glycosyltransferase Family 4 NW98_RS29725 PF00534 Glycosyl transferases group 1 NW98_RS29730 PF16363 GDP-mannose 4,6 dehydratase NW98_RS29735 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS29735 PF01627 Hpt domain NW98_RS29735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS29735 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS29735 PF00072 Response regulator receiver domain NW98_RS29750 PF00158 Sigma-54 interaction domain NW98_RS29750 PF00072 Response regulator receiver domain NW98_RS29750 PF02954 Bacterial regulatory protein, Fis family NW98_RS29765 PF00158 Sigma-54 interaction domain NW98_RS29765 PF02954 Bacterial regulatory protein, Fis family NW98_RS29765 PF01590 GAF domain NW98_RS29785 PF16861 Carbamoyltransferase C-terminus NW98_RS29785 PF02543 Carbamoyltransferase N-terminus NW98_RS29790 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NW98_RS29810 PF00664 ABC transporter transmembrane region NW98_RS29810 PF00005 ABC transporter NW98_RS29825 PF02666 Phosphatidylserine decarboxylase NW98_RS29830 PF13085 2Fe-2S iron-sulfur cluster binding domain NW98_RS29845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NW98_RS29845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NW98_RS29850 PF00296 Luciferase-like monooxygenase NW98_RS29860 PF01648 4'-phosphopantetheinyl transferase superfamily NW98_RS29880 PF01613 Flavin reductase like domain NW98_RS29900 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS29900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NW98_RS29905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NW98_RS29905 PF02817 e3 binding domain NW98_RS29905 PF00364 Biotin-requiring enzyme NW98_RS29910 PF02779 Transketolase, pyrimidine binding domain NW98_RS29910 PF02780 Transketolase, C-terminal domain NW98_RS29915 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal NW98_RS29915 PF00676 Dehydrogenase E1 component NW98_RS29950 PF03466 LysR substrate binding domain NW98_RS29950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NW98_RS29965 PF05199 GMC oxidoreductase NW98_RS29970 PF14759 Reductase C-terminal NW98_RS29970 PF07992 Pyridine nucleotide-disulphide oxidoreductase NW98_RS30000 PF02867 Ribonucleotide reductase, barrel domain NW98_RS30000 PF03477 ATP cone domain NW98_RS30000 PF00317 Ribonucleotide reductase, all-alpha domain NW98_RS30020 PF00916 Sulfate permease family NW98_RS30020 PF01740 STAS domain NW98_RS30030 PF00571 CBS domain NW98_RS30030 PF03448 MgtE intracellular N domain NW98_RS30030 PF01769 Divalent cation transporter NW98_RS30045 PF00011 Hsp20/alpha crystallin family NW98_RS30055 PF13609 Gram-negative porin NW98_RS30060 PF00501 AMP-binding enzyme NW98_RS30060 PF13193 AMP-binding enzyme C-terminal domain NW98_RS30070 PF17874 MalT-like TPR region NW98_RS30070 PF00196 Bacterial regulatory proteins, luxR family NW98_RS30080 PF00107 Zinc-binding dehydrogenase NW98_RS30080 PF08240 Alcohol dehydrogenase GroES-like domain NW98_RS30085 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NW98_RS30090 PF05853 beta-keto acid cleavage enzyme NW98_RS30105 PF00384 Molybdopterin oxidoreductase NW98_RS30105 PF04879 Molybdopterin oxidoreductase Fe4S4 domain NW98_RS30105 PF01568 Molydopterin dinucleotide binding domain NW98_RS30110 PF12800 4Fe-4S binding domain NW98_RS30110 PF13247 4Fe-4S dicluster domain NW98_RS30115 PF04976 DMSO reductase anchor subunit (DmsC) NW98_RS30155 PF00912 Transglycosylase NW98_RS30155 PF00905 Penicillin binding protein transpeptidase domain NW98_RS30155 PF17092 Penicillin-binding protein OB-like domain NW98_RS30185 PF13609 Gram-negative porin NW98_RS30195 PF01425 Amidase NW98_RS30215 PF00583 Acetyltransferase (GNAT) family NW98_RS30235 PF09383 NIL domain NW98_RS30235 PF00005 ABC transporter NW98_RS30255 PF17200 Single Cache domain 2 NW98_RS30255 PF07730 Histidine kinase NW98_RS30260 PF00196 Bacterial regulatory proteins, luxR family NW98_RS30260 PF00072 Response regulator receiver domain NW98_RS30270 PF13542 Helix-turn-helix domain of transposase family ISL3 NW98_RS30270 PF01610 Transposase NW98_RS30270 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 NW98_RS30300 PF08447 PAS fold NW98_RS30300 PF00563 EAL domain NW98_RS30300 PF08448 PAS fold NW98_RS30300 PF13426 PAS domain NW98_RS30300 PF00990 Diguanylate cyclase, GGDEF domain NW98_RS30300 PF05231 MASE1 NW98_RS30310 PF00561 alpha/beta hydrolase fold NW98_RS30345 PF00005 ABC transporter NW98_RS30355 PF00067 Cytochrome P450 NW98_RS30365 PF00550 Phosphopantetheine attachment site NW98_RS30365 PF08659 KR domain NW98_RS30365 PF02801 Beta-ketoacyl synthase, C-terminal domain NW98_RS30365 PF00109 Beta-ketoacyl synthase, N-terminal domain NW98_RS30365 PF16197 Ketoacyl-synthetase C-terminal extension NW98_RS30365 PF00698 Acyl transferase domain NW98_RS30385 PF00202 Aminotransferase class-III NW98_RS30395 PF00005 ABC transporter NW98_RS30400 PF00528 Binding-protein-dependent transport system inner membrane component NW98_RS30405 PF00497 Bacterial extracellular solute-binding proteins, family 3 NW98_RS30420 PF13243 Squalene-hopene cyclase C-terminal domain NW98_RS30420 PF13249 Squalene-hopene cyclase N-terminal domain NW98_RS30445 PF00990 Diguanylate cyclase, GGDEF domain NW98_RS30455 PF00486 Transcriptional regulatory protein, C terminal NW98_RS30455 PF00072 Response regulator receiver domain NW98_RS30465 PF13188 PAS domain NW98_RS30465 PF08448 PAS fold NW98_RS30465 PF00072 Response regulator receiver domain NW98_RS30465 PF00512 His Kinase A (phospho-acceptor) domain NW98_RS30465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NW98_RS30470 PF03358 NADPH-dependent FMN reductase NW98_RS30475 PF04542 Sigma-70 region 2 NW98_RS30475 PF08281 Sigma-70, region 4 NW98_RS30485 PF03960 ArsC family NW98_RS30490 PF13614 AAA domain