NW98_RS00005	SM00382	ATPases associated with a variety of cellular activities
NW98_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
NW98_RS00010	SM00480	DNA polymerase III beta subunit
NW98_RS00020	SM00387	Histidine kinase-like ATPases
NW98_RS00020	SM00433	TopoisomeraseII
NW98_RS00090	SM00240	Forkhead associated domain
NW98_RS00095	SM00220	Serine/Threonine protein kinases, catalytic domain
NW98_RS00115	SM01007	Class II Aldolase and Adducin N-terminal domain
NW98_RS00130	SM00052	Putative diguanylate phosphodiesterase
NW98_RS00130	SM00267	diguanylate cyclase
NW98_RS00175	SM00382	ATPases associated with a variety of cellular activities
NW98_RS00220	SM00419	helix_turn_helix, cAMP Regulatory protein
NW98_RS00270	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS00295	SM00363	S4 RNA-binding domain
NW98_RS00305	SM00855	Phosphoglycerate mutase family
NW98_RS00320	SM00382	ATPases associated with a variety of cellular activities
NW98_RS00325	SM00278	Helix-hairpin-helix DNA-binding motif class 1
NW98_RS00340	SM00798	AICARFT/IMPCHase bienzyme
NW98_RS00340	SM00851	MGS-like domain
NW98_RS00360	SM01011	Aminopeptidase P, N-terminal domain
NW98_RS00395	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
NW98_RS00395	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
NW98_RS00445	SM00981	NW98_RS00445
NW98_RS00490	SM00867	YceI-like domain 
NW98_RS00495	SM00867	YceI-like domain 
NW98_RS00520	SM01323	NW98_RS00520
NW98_RS00540	SM00487	DEAD-like helicases superfamily
NW98_RS00540	SM00490	helicase superfamily c-terminal domain
NW98_RS00585	SM00072	Guanylate kinase homologues.
NW98_RS00595	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS00595	SM00866	NW98_RS00595
NW98_RS00625	SM00382	ATPases associated with a variety of cellular activities
NW98_RS00630	SM00382	ATPases associated with a variety of cellular activities
NW98_RS00640	SM00382	ATPases associated with a variety of cellular activities
NW98_RS00770	SM00883	Chaperonin 10 Kd subunit
NW98_RS00785	SM00382	ATPases associated with a variety of cellular activities
NW98_RS00800	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS00805	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
NW98_RS01000	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW98_RS01020	SM00382	ATPases associated with a variety of cellular activities
NW98_RS01055	SM00464	Found in ATP-dependent protease La (LON)
NW98_RS01060	SM00478	endonuclease III
NW98_RS01065	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
NW98_RS01065	SM01232	NW98_RS01065
NW98_RS01070	SM00028	Tetratricopeptide repeats
NW98_RS01090	SM01400	NW98_RS01090
NW98_RS01130	SM00382	ATPases associated with a variety of cellular activities
NW98_RS01130	SM00962	SRP54-type protein, GTPase domain
NW98_RS01130	SM00963	SRP54-type protein, helical bundle domain
NW98_RS01155	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW98_RS01220	SM00382	ATPases associated with a variety of cellular activities
NW98_RS01235	SM00481	DNA polymerase alpha chain like domain
NW98_RS01270	SM00382	ATPases associated with a variety of cellular activities
NW98_RS01355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS01355	SM00866	NW98_RS01355
NW98_RS01380	SM01081	Putative carbohydrate binding domain
NW98_RS01470	SM00422	helix_turn_helix, mercury resistance
NW98_RS01495	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS01555	SM00487	DEAD-like helicases superfamily
NW98_RS01555	SM00490	helicase superfamily c-terminal domain
NW98_RS01570	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS01605	SM00382	ATPases associated with a variety of cellular activities
NW98_RS01655	SM00470	ParB-like nuclease domain
NW98_RS01670	SM01228	NW98_RS01670
NW98_RS01675	SM00382	ATPases associated with a variety of cellular activities
NW98_RS01680	SM00382	ATPases associated with a variety of cellular activities
NW98_RS01715	SM00382	ATPases associated with a variety of cellular activities
NW98_RS01720	SM00382	ATPases associated with a variety of cellular activities
NW98_RS01755	SM01118	NW98_RS01755
NW98_RS01760	SM00344	helix_turn_helix ASNC type
NW98_RS01780	SM00448	cheY-homologous receiver domain
NW98_RS01780	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS01785	SM00387	Histidine kinase-like ATPases
NW98_RS01785	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS01800	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
NW98_RS01815	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS01850	SM00411	bacterial (prokaryotic) histone like domain
NW98_RS01870	SM00849	Metallo-beta-lactamase superfamily
NW98_RS01880	SM00344	helix_turn_helix ASNC type
NW98_RS01890	SM00528	Domain in histone-like proteins of HNS family
NW98_RS01955	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS01955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS02035	SM00822	NW98_RS02035
NW98_RS02060	SM00028	Tetratricopeptide repeats
NW98_RS02120	SM00528	Domain in histone-like proteins of HNS family
NW98_RS02160	SM00448	cheY-homologous receiver domain
NW98_RS02165	SM00073	Histidine Phosphotransfer domain
NW98_RS02165	SM00260	Two component signalling adaptor domain
NW98_RS02165	SM00387	Histidine kinase-like ATPases
NW98_RS02165	SM01231	NW98_RS02165
NW98_RS02170	SM00260	Two component signalling adaptor domain
NW98_RS02175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS02175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS02180	SM00138	Methyltransferase, chemotaxis proteins 
NW98_RS02190	SM00448	cheY-homologous receiver domain
NW98_RS02200	SM00448	cheY-homologous receiver domain
NW98_RS02240	SM00382	ATPases associated with a variety of cellular activities
NW98_RS02240	SM00962	SRP54-type protein, GTPase domain
NW98_RS02255	SM00996	S-adenosyl-L-homocysteine hydrolase
NW98_RS02255	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
NW98_RS02310	SM00382	ATPases associated with a variety of cellular activities
NW98_RS02310	SM01086	C-terminal, D2-small domain, of ClpB protein
NW98_RS02355	SM00382	ATPases associated with a variety of cellular activities
NW98_RS02410	SM00769	Water Stress and Hypersensitive response
NW98_RS02505	SM00749	bacterial OsmY and nodulation domain
NW98_RS02540	SM00357	Cold shock protein domain
NW98_RS02570	SM00965	Secretin and TonB N terminus short domain
NW98_RS02585	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NW98_RS02605	SM00382	ATPases associated with a variety of cellular activities
NW98_RS02620	SM01321	NW98_RS02620
NW98_RS02650	SM00382	ATPases associated with a variety of cellular activities
NW98_RS02675	SM00382	ATPases associated with a variety of cellular activities
NW98_RS02710	SM00382	ATPases associated with a variety of cellular activities
NW98_RS02810	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW98_RS02890	SM00422	helix_turn_helix, mercury resistance
NW98_RS02910	SM00382	ATPases associated with a variety of cellular activities
NW98_RS02920	SM00387	Histidine kinase-like ATPases
NW98_RS02920	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS02925	SM00448	cheY-homologous receiver domain
NW98_RS02925	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS02965	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS02970	SM00382	ATPases associated with a variety of cellular activities
NW98_RS02980	SM00382	ATPases associated with a variety of cellular activities
NW98_RS03065	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS03175	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS03245	SM00382	ATPases associated with a variety of cellular activities
NW98_RS03265	SM00833	Cobalamin synthesis protein cobW C-terminal domain
NW98_RS03275	SM01219	NW98_RS03275
NW98_RS03325	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS03325	SM00895	NW98_RS03325
NW98_RS03345	SM00947	Carbonic anhydrase
NW98_RS03350	SM01116	NW98_RS03350
NW98_RS03365	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
NW98_RS03370	SM00861	Transketolase, pyrimidine binding domain
NW98_RS03405	SM00919	Malic enzyme, NAD binding domain
NW98_RS03405	SM01274	NW98_RS03405
NW98_RS03425	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
NW98_RS03435	SM00822	NW98_RS03435
NW98_RS03445	SM00382	ATPases associated with a variety of cellular activities
NW98_RS03455	SM00822	NW98_RS03455
NW98_RS03470	SM00346	helix_turn_helix isocitrate lyase regulation
NW98_RS03500	SM00955	NW98_RS03500
NW98_RS03535	SM00878	Biotin carboxylase C-terminal domain
NW98_RS03595	SM00644	NW98_RS03595
NW98_RS03610	SM00382	ATPases associated with a variety of cellular activities
NW98_RS03610	SM00962	SRP54-type protein, GTPase domain
NW98_RS03610	SM00963	SRP54-type protein, helical bundle domain
NW98_RS03650	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
NW98_RS03695	SM01091	Transporter associated domain
NW98_RS03700	SM00382	ATPases associated with a variety of cellular activities
NW98_RS03735	SM00382	ATPases associated with a variety of cellular activities
NW98_RS03745	SM00957	SecA DEAD-like domain
NW98_RS03745	SM00958	SecA preprotein cross-linking domain
NW98_RS03770	SM00864	Tubulin/FtsZ family, GTPase domain
NW98_RS03770	SM00865	Tubulin/FtsZ family, C-terminal domain
NW98_RS03780	SM00842	Cell division protein FtsA
NW98_RS03865	SM01018	B12 binding domain
NW98_RS03890	SM00346	helix_turn_helix isocitrate lyase regulation
NW98_RS03950	SM00671	Sel1-like repeats.
NW98_RS03965	SM00382	ATPases associated with a variety of cellular activities
NW98_RS04000	SM00936	Penicillin-binding protein 5, C-terminal domain 
NW98_RS04030	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS04100	SM00382	ATPases associated with a variety of cellular activities
NW98_RS04100	SM00448	cheY-homologous receiver domain
NW98_RS04140	SM00382	ATPases associated with a variety of cellular activities
NW98_RS04150	SM00938	Nitrogen regulatory protein P-II
NW98_RS04320	SM00047	Lysozyme subfamily 2
NW98_RS04370	SM00858	NW98_RS04370
NW98_RS04435	SM00796	Allophanate hydrolase subunit 1
NW98_RS04440	SM00797	Allophanate hydrolase subunit 2
NW98_RS04470	SM00382	ATPases associated with a variety of cellular activities
NW98_RS04475	SM00382	ATPases associated with a variety of cellular activities
NW98_RS04515	SM00382	ATPases associated with a variety of cellular activities
NW98_RS04550	SM00421	helix_turn_helix, Lux Regulon
NW98_RS04550	SM00448	cheY-homologous receiver domain
NW98_RS04610	SM00382	ATPases associated with a variety of cellular activities
NW98_RS04725	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
NW98_RS04730	SM00833	Cobalamin synthesis protein cobW C-terminal domain
NW98_RS04755	SM00382	ATPases associated with a variety of cellular activities
NW98_RS04755	SM01086	C-terminal, D2-small domain, of ClpB protein
NW98_RS04760	SM00448	cheY-homologous receiver domain
NW98_RS04765	SM00387	Histidine kinase-like ATPases
NW98_RS04765	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS04810	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS04825	SM00829	Enoylreductase
NW98_RS04875	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW98_RS04875	SM00245	tail specific protease
NW98_RS04880	SM00855	Phosphoglycerate mutase family
NW98_RS04885	SM00450	Rhodanese Homology Domain
NW98_RS04905	SM00506	Appr-1"-p processing enzyme
NW98_RS05000	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS05000	SM01049	NW98_RS05000
NW98_RS05045	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS05175	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
NW98_RS05175	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
NW98_RS05180	SM00649	Ribosomal protein L11/L12
NW98_RS05205	SM00663	RNA polymerase I subunit A N-terminus
NW98_RS05220	SM00341	Helicase and RNase D C-terminal
NW98_RS05220	SM00487	DEAD-like helicases superfamily
NW98_RS05220	SM00490	helicase superfamily c-terminal domain
NW98_RS05220	SM00956	NW98_RS05220
NW98_RS05235	SM00838	Elongation factor G C-terminus
NW98_RS05235	SM00889	Elongation factor G, domain IV
NW98_RS05245	SM01403	NW98_RS05245
NW98_RS05265	SM01382	NW98_RS05265
NW98_RS05265	SM01383	NW98_RS05265
NW98_RS05280	SM00322	K homology RNA-binding domain
NW98_RS05300	SM01374	NW98_RS05300
NW98_RS05355	SM00316	Ribosomal protein S1-like RNA-binding domain
NW98_RS05375	SM00363	S4 RNA-binding domain
NW98_RS05375	SM01390	NW98_RS05375
NW98_RS05380	SM00662	RNA polymerases D
NW98_RS05400	SM01004	Delta-aminolevulinic acid dehydratase
NW98_RS05465	SM00859	Semialdehyde dehydrogenase, NAD binding domain
NW98_RS05495	SM00919	Malic enzyme, NAD binding domain
NW98_RS05495	SM01274	NW98_RS05495
NW98_RS05530	SM00344	helix_turn_helix ASNC type
NW98_RS05660	SM00344	helix_turn_helix ASNC type
NW98_RS05665	SM00382	ATPases associated with a variety of cellular activities
NW98_RS05850	SM00382	ATPases associated with a variety of cellular activities
NW98_RS05880	SM00354	helix_turn _helix lactose operon repressor
NW98_RS05915	SM00267	diguanylate cyclase
NW98_RS05940	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS05945	SM00344	helix_turn_helix ASNC type
NW98_RS06005	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS06115	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NW98_RS06175	SM00479	NW98_RS06175
NW98_RS06190	SM00849	Metallo-beta-lactamase superfamily
NW98_RS06195	SM00257	Lysin motif
NW98_RS06215	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS06225	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
NW98_RS06235	SM00851	MGS-like domain
NW98_RS06235	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
NW98_RS06250	SM01103	NW98_RS06250
NW98_RS06260	SM00382	ATPases associated with a variety of cellular activities
NW98_RS06295	SM00382	ATPases associated with a variety of cellular activities
NW98_RS06305	SM00448	cheY-homologous receiver domain
NW98_RS06305	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS06310	SM00387	Histidine kinase-like ATPases
NW98_RS06310	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS06375	SM00855	Phosphoglycerate mutase family
NW98_RS06415	SM00257	Lysin motif
NW98_RS06455	SM00422	helix_turn_helix, mercury resistance
NW98_RS06460	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS06480	SM00642	Alpha-amylase domain
NW98_RS06490	SM00642	Alpha-amylase domain
NW98_RS06495	SM00642	Alpha-amylase domain
NW98_RS06505	SM00642	Alpha-amylase domain
NW98_RS06510	SM00642	Alpha-amylase domain
NW98_RS06525	SM00060	Fibronectin type 3 domain
NW98_RS06565	SM00448	cheY-homologous receiver domain
NW98_RS06565	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS06590	SM00448	cheY-homologous receiver domain
NW98_RS06590	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS06610	SM00028	Tetratricopeptide repeats
NW98_RS06615	SM00528	Domain in histone-like proteins of HNS family
NW98_RS06635	SM00458	Ricin-type beta-trefoil
NW98_RS06635	SM00612	NW98_RS06635
NW98_RS06780	SM00972	Spore Coat Protein U domain
NW98_RS06785	SM00972	Spore Coat Protein U domain
NW98_RS06800	SM00972	Spore Coat Protein U domain
NW98_RS06810	SM00387	Histidine kinase-like ATPases
NW98_RS06810	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS06810	SM00448	cheY-homologous receiver domain
NW98_RS06815	SM00421	helix_turn_helix, Lux Regulon
NW98_RS06815	SM00448	cheY-homologous receiver domain
NW98_RS06920	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NW98_RS07000	SM00382	ATPases associated with a variety of cellular activities
NW98_RS07005	SM00382	ATPases associated with a variety of cellular activities
NW98_RS07030	SM00382	ATPases associated with a variety of cellular activities
NW98_RS07075	SM00448	cheY-homologous receiver domain
NW98_RS07075	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS07085	SM00387	Histidine kinase-like ATPases
NW98_RS07085	SM01080	NW98_RS07085
NW98_RS07120	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS07205	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW98_RS07315	SM00972	Spore Coat Protein U domain
NW98_RS07320	SM00972	Spore Coat Protein U domain
NW98_RS07325	SM00972	Spore Coat Protein U domain
NW98_RS07340	SM00972	Spore Coat Protein U domain
NW98_RS07350	SM00387	Histidine kinase-like ATPases
NW98_RS07350	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS07350	SM00448	cheY-homologous receiver domain
NW98_RS07355	SM00421	helix_turn_helix, Lux Regulon
NW98_RS07355	SM00448	cheY-homologous receiver domain
NW98_RS07460	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NW98_RS07540	SM00382	ATPases associated with a variety of cellular activities
NW98_RS07545	SM00382	ATPases associated with a variety of cellular activities
NW98_RS07570	SM00382	ATPases associated with a variety of cellular activities
NW98_RS07615	SM00448	cheY-homologous receiver domain
NW98_RS07615	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS07625	SM00387	Histidine kinase-like ATPases
NW98_RS07625	SM01080	NW98_RS07625
NW98_RS07660	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS07745	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW98_RS07855	SM00972	Spore Coat Protein U domain
NW98_RS07860	SM00972	Spore Coat Protein U domain
NW98_RS07865	SM00972	Spore Coat Protein U domain
NW98_RS07880	SM00972	Spore Coat Protein U domain
NW98_RS07890	SM00387	Histidine kinase-like ATPases
NW98_RS07890	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS07890	SM00448	cheY-homologous receiver domain
NW98_RS07895	SM00421	helix_turn_helix, Lux Regulon
NW98_RS07895	SM00448	cheY-homologous receiver domain
NW98_RS08000	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NW98_RS08080	SM00382	ATPases associated with a variety of cellular activities
NW98_RS08085	SM00382	ATPases associated with a variety of cellular activities
NW98_RS08110	SM00382	ATPases associated with a variety of cellular activities
NW98_RS08155	SM00448	cheY-homologous receiver domain
NW98_RS08155	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS08165	SM00387	Histidine kinase-like ATPases
NW98_RS08165	SM01080	NW98_RS08165
NW98_RS08200	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS08285	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW98_RS08400	SM00861	Transketolase, pyrimidine binding domain
NW98_RS08415	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS08455	SM00316	Ribosomal protein S1-like RNA-binding domain
NW98_RS08455	SM00322	K homology RNA-binding domain
NW98_RS08465	SM00363	S4 RNA-binding domain
NW98_RS08570	SM00422	helix_turn_helix, mercury resistance
NW98_RS08575	SM00411	bacterial (prokaryotic) histone like domain
NW98_RS08580	SM00873	B3/4 domain
NW98_RS08580	SM00874	tRNA synthetase B5 domain
NW98_RS08580	SM00896	Ferredoxin-fold anticodon binding domain
NW98_RS08605	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NW98_RS08615	SM00954	Region found in RelA / SpoT proteins
NW98_RS08660	SM00882	Coenzyme A transferase
NW98_RS08665	SM00882	Coenzyme A transferase
NW98_RS08675	SM00421	helix_turn_helix, Lux Regulon
NW98_RS08705	SM00822	NW98_RS08705
NW98_RS08735	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
NW98_RS08740	SM00923	MbtH-like protein
NW98_RS08750	SM00823	Phosphopantetheine attachment site
NW98_RS08750	SM00824	Thioesterase
NW98_RS08775	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS08785	SM00260	Two component signalling adaptor domain
NW98_RS08790	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS08845	SM00382	ATPases associated with a variety of cellular activities
NW98_RS08915	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS08925	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS08985	SM00495	Chitin-binding domain type 3
NW98_RS09020	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09035	SM00833	Cobalamin synthesis protein cobW C-terminal domain
NW98_RS09085	SM00823	Phosphopantetheine attachment site
NW98_RS09095	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09130	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09140	SM00923	MbtH-like protein
NW98_RS09155	SM00822	NW98_RS09155
NW98_RS09180	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09190	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS09225	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09280	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS09310	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09355	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09390	SM00763	PrkA AAA domain
NW98_RS09410	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09460	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09570	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09640	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS09640	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
NW98_RS09660	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS09660	SM00895	NW98_RS09660
NW98_RS09670	SM00644	NW98_RS09670
NW98_RS09680	SM00967	RNA 2'-O ribose methyltransferase substrate binding
NW98_RS09685	SM00316	Ribosomal protein S1-like RNA-binding domain
NW98_RS09685	SM00357	Cold shock protein domain
NW98_RS09685	SM00955	NW98_RS09685
NW98_RS09705	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS09705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS09785	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09800	SM00028	Tetratricopeptide repeats
NW98_RS09830	SM00858	NW98_RS09830
NW98_RS09875	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09925	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09940	SM00382	ATPases associated with a variety of cellular activities
NW98_RS09990	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS10025	SM00363	S4 RNA-binding domain
NW98_RS10035	SM00491	NW98_RS10035
NW98_RS10050	SM00316	Ribosomal protein S1-like RNA-binding domain
NW98_RS10050	SM00732	Likely ribonuclease with RNase H fold.
NW98_RS10075	SM00788	Adenylosuccinate synthetase
NW98_RS10090	SM00244	prohibitin homologues
NW98_RS10095	SM00244	prohibitin homologues
NW98_RS10110	SM00382	ATPases associated with a variety of cellular activities
NW98_RS10115	SM00564	beta-propeller repeat
NW98_RS10135	SM00530	Helix-turn-helix XRE-family like proteins 
NW98_RS10145	SM00562	NW98_RS10145
NW98_RS10180	SM00257	Lysin motif
NW98_RS10200	SM00493	NW98_RS10200
NW98_RS10210	SM00382	ATPases associated with a variety of cellular activities
NW98_RS10230	SM00357	Cold shock protein domain
NW98_RS10230	SM00382	ATPases associated with a variety of cellular activities
NW98_RS10230	SM00959	Rho termination factor, N-terminal domain
NW98_RS10235	SM00422	helix_turn_helix, mercury resistance
NW98_RS10280	SM00422	helix_turn_helix, mercury resistance
NW98_RS10295	SM00382	ATPases associated with a variety of cellular activities
NW98_RS10295	SM01086	C-terminal, D2-small domain, of ClpB protein
NW98_RS10320	SM00852	Probable molybdopterin binding domain
NW98_RS10395	SM00670	Large family of predicted nucleotide-binding domains
NW98_RS10420	SM00382	ATPases associated with a variety of cellular activities
NW98_RS10485	SM00870	NW98_RS10485
NW98_RS10540	SM00248	ankyrin repeats
NW98_RS10590	SM00829	Enoylreductase
NW98_RS10600	SM00886	Stress responsive A/B Barrel Domain
NW98_RS10680	SM01211	NW98_RS10680
NW98_RS10710	SM00382	ATPases associated with a variety of cellular activities
NW98_RS10785	SM00382	ATPases associated with a variety of cellular activities
NW98_RS10785	SM00464	Found in ATP-dependent protease La (LON)
NW98_RS10790	SM00382	ATPases associated with a variety of cellular activities
NW98_RS10790	SM00994	ClpX C4-type zinc finger
NW98_RS10790	SM01086	C-terminal, D2-small domain, of ClpB protein
NW98_RS10820	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS10835	SM00421	helix_turn_helix, Lux Regulon
NW98_RS10860	SM00155	Phospholipase D. Active site motifs.
NW98_RS10910	SM00448	cheY-homologous receiver domain
NW98_RS10910	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS10915	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS10915	SM00387	Histidine kinase-like ATPases
NW98_RS10915	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS10940	SM00487	DEAD-like helicases superfamily
NW98_RS10940	SM00490	helicase superfamily c-terminal domain
NW98_RS10940	SM00982	NW98_RS10940
NW98_RS10940	SM01058	CarD-like/TRCF domain
NW98_RS11055	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS11055	SM00895	NW98_RS11055
NW98_RS11140	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW98_RS11140	SM01240	NW98_RS11140
NW98_RS11185	SM00244	prohibitin homologues
NW98_RS11215	SM00944	Pro-kumamolisin, activation domain
NW98_RS11265	SM00935	Outer membrane protein (OmpH-like)
NW98_RS11275	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW98_RS11325	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NW98_RS11330	SM00363	S4 RNA-binding domain
NW98_RS11340	SM00278	Helix-hairpin-helix DNA-binding motif class 1
NW98_RS11340	SM00292	breast cancer carboxy-terminal domain
NW98_RS11340	SM00532	Ligase N family
NW98_RS11350	SM00771	ZipA, C-terminal domain (FtsZ-binding)
NW98_RS11355	SM00968	SMC proteins Flexible Hinge Domain
NW98_RS11400	SM00155	Phospholipase D. Active site motifs.
NW98_RS11410	SM00382	ATPases associated with a variety of cellular activities
NW98_RS11420	SM00382	ATPases associated with a variety of cellular activities
NW98_RS11425	SM01005	Alanine racemase, C-terminal domain
NW98_RS11450	SM00986	Uracil DNA glycosylase superfamily
NW98_RS11450	SM00987	UreE urease accessory protein, C-terminal domain 
NW98_RS11470	SM00487	DEAD-like helicases superfamily
NW98_RS11470	SM00490	helicase superfamily c-terminal domain
NW98_RS11520	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS11570	SM00382	ATPases associated with a variety of cellular activities
NW98_RS11610	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW98_RS11695	SM00861	Transketolase, pyrimidine binding domain
NW98_RS11730	SM00823	Phosphopantetheine attachment site
NW98_RS11730	SM01294	NW98_RS11730
NW98_RS11750	SM00823	Phosphopantetheine attachment site
NW98_RS11795	SM00869	Autotransporter beta-domain
NW98_RS11830	SM00977	TilS substrate C-terminal domain
NW98_RS11840	SM00478	endonuclease III
NW98_RS11845	SM00840	NW98_RS11845
NW98_RS11850	SM00028	Tetratricopeptide repeats
NW98_RS11915	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
NW98_RS11915	SM00534	ATPase domain of DNA mismatch repair MUTS family
NW98_RS11930	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
NW98_RS11945	SM00849	Metallo-beta-lactamase superfamily
NW98_RS11955	SM01130	NW98_RS11955
NW98_RS11980	SM00481	DNA polymerase alpha chain like domain
NW98_RS12025	SM01192	NW98_RS12025
NW98_RS12025	SM01193	NW98_RS12025
NW98_RS12050	SM00849	Metallo-beta-lactamase superfamily
NW98_RS12060	SM00382	ATPases associated with a variety of cellular activities
NW98_RS12120	SM00271	DnaJ molecular chaperone homology domain
NW98_RS12145	SM00226	Low molecular weight phosphatase family
NW98_RS12170	SM00346	helix_turn_helix isocitrate lyase regulation
NW98_RS12220	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
NW98_RS12220	SM00091	PAS domain
NW98_RS12220	SM00387	Histidine kinase-like ATPases
NW98_RS12220	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS12225	SM00421	helix_turn_helix, Lux Regulon
NW98_RS12225	SM00448	cheY-homologous receiver domain
NW98_RS12275	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW98_RS12295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS12295	SM00387	Histidine kinase-like ATPases
NW98_RS12300	SM00421	helix_turn_helix, Lux Regulon
NW98_RS12300	SM00448	cheY-homologous receiver domain
NW98_RS12315	SM00382	ATPases associated with a variety of cellular activities
NW98_RS12315	SM00448	cheY-homologous receiver domain
NW98_RS12320	SM00387	Histidine kinase-like ATPases
NW98_RS12320	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS12325	SM01230	NW98_RS12325
NW98_RS12335	SM00450	Rhodanese Homology Domain
NW98_RS12340	SM00852	Probable molybdopterin binding domain
NW98_RS12365	SM00382	ATPases associated with a variety of cellular activities
NW98_RS12365	SM00487	DEAD-like helicases superfamily
NW98_RS12365	SM00490	helicase superfamily c-terminal domain
NW98_RS12365	SM00847	Helicase associated domain (HA2)  Add an annotation
NW98_RS12535	SM00382	ATPases associated with a variety of cellular activities
NW98_RS12560	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS12560	SM00387	Histidine kinase-like ATPases
NW98_RS12560	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS12565	SM00448	cheY-homologous receiver domain
NW98_RS12565	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS12585	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS12600	SM00382	ATPases associated with a variety of cellular activities
NW98_RS12610	SM00938	Nitrogen regulatory protein P-II
NW98_RS12635	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS12665	SM00028	Tetratricopeptide repeats
NW98_RS12705	SM00530	Helix-turn-helix XRE-family like proteins 
NW98_RS12715	SM00972	Spore Coat Protein U domain
NW98_RS12720	SM00972	Spore Coat Protein U domain
NW98_RS12885	SM00855	Phosphoglycerate mutase family
NW98_RS12900	SM00382	ATPases associated with a variety of cellular activities
NW98_RS13060	SM01230	NW98_RS13060
NW98_RS13120	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS13120	SM00866	NW98_RS13120
NW98_RS13150	SM00421	helix_turn_helix, Lux Regulon
NW98_RS13260	SM00100	Cyclic nucleotide-monophosphate binding domain
NW98_RS13260	SM00419	helix_turn_helix, cAMP Regulatory protein
NW98_RS13265	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS13270	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS13270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS13295	SM00382	ATPases associated with a variety of cellular activities
NW98_RS13370	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS13420	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS13425	SM00382	ATPases associated with a variety of cellular activities
NW98_RS13485	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS13545	SM00382	ATPases associated with a variety of cellular activities
NW98_RS13625	SM00278	Helix-hairpin-helix DNA-binding motif class 1
NW98_RS13625	SM00465	GIY-YIG type nucleases (URI domain)
NW98_RS13635	SM00841	Elongation factor P, C-terminal
NW98_RS13635	SM01185	NW98_RS13635
NW98_RS13640	SM00382	ATPases associated with a variety of cellular activities
NW98_RS13640	SM00448	cheY-homologous receiver domain
NW98_RS13670	SM00358	Double-stranded RNA binding motif
NW98_RS13670	SM00535	Ribonuclease III family
NW98_RS13680	SM00838	Elongation factor G C-terminus
NW98_RS13690	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW98_RS13715	SM00825	Beta-ketoacyl synthase
NW98_RS13725	SM00822	NW98_RS13725
NW98_RS13730	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NW98_RS13780	SM00363	S4 RNA-binding domain
NW98_RS13790	SM00316	Ribosomal protein S1-like RNA-binding domain
NW98_RS13795	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS13805	SM00852	Probable molybdopterin binding domain
NW98_RS13930	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NW98_RS13955	SM01329	NW98_RS13955
NW98_RS14165	SM00028	Tetratricopeptide repeats
NW98_RS14190	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW98_RS14190	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
NW98_RS14195	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
NW98_RS14260	SM00434	DNA Topoisomerase IV
NW98_RS14275	SM00830	Chorismate mutase type II
NW98_RS14290	SM00316	Ribosomal protein S1-like RNA-binding domain
NW98_RS14295	SM00411	bacterial (prokaryotic) histone like domain
NW98_RS14310	SM00028	Tetratricopeptide repeats
NW98_RS14315	SM00984	UDP binding domain
NW98_RS14330	SM00278	Helix-hairpin-helix DNA-binding motif class 1
NW98_RS14365	SM00382	ATPases associated with a variety of cellular activities
NW98_RS14365	SM00930	NW98_RS14365
NW98_RS14380	SM00893	Electron transfer flavoprotein domain
NW98_RS14385	SM00893	Electron transfer flavoprotein domain
NW98_RS14400	SM00344	helix_turn_helix ASNC type
NW98_RS14405	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS14490	SM00479	NW98_RS14490
NW98_RS14495	SM00852	Probable molybdopterin binding domain
NW98_RS14525	SM00382	ATPases associated with a variety of cellular activities
NW98_RS14545	SM00382	ATPases associated with a variety of cellular activities
NW98_RS14610	SM01207	NW98_RS14610
NW98_RS14645	SM00646	NW98_RS14645
NW98_RS14710	SM00903	Flavin reductase like domain
NW98_RS14715	SM00344	helix_turn_helix ASNC type
NW98_RS14805	SM00382	ATPases associated with a variety of cellular activities
NW98_RS14840	SM00822	NW98_RS14840
NW98_RS14855	SM00382	ATPases associated with a variety of cellular activities
NW98_RS14870	SM00829	Enoylreductase
NW98_RS14875	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS14950	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW98_RS14960	SM00387	Histidine kinase-like ATPases
NW98_RS14960	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS14965	SM00448	cheY-homologous receiver domain
NW98_RS14965	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS15005	SM01001	AIR carboxylase
NW98_RS15105	SM00387	Histidine kinase-like ATPases
NW98_RS15105	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS15110	SM00448	cheY-homologous receiver domain
NW98_RS15110	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS15115	SM00382	ATPases associated with a variety of cellular activities
NW98_RS15135	SM00881	CoA binding domain
NW98_RS15190	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
NW98_RS15190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS15210	SM00448	cheY-homologous receiver domain
NW98_RS15215	SM00387	Histidine kinase-like ATPases
NW98_RS15235	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
NW98_RS15265	SM00487	DEAD-like helicases superfamily
NW98_RS15265	SM00490	helicase superfamily c-terminal domain
NW98_RS15285	SM00420	helix_turn_helix, Deoxyribose operon repressor
NW98_RS15285	SM01134	NW98_RS15285
NW98_RS15365	SM00530	Helix-turn-helix XRE-family like proteins 
NW98_RS15385	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS15410	SM01091	Transporter associated domain
NW98_RS15425	SM00836	DALR anticodon binding domain
NW98_RS15435	SM00563	Phosphate acyltransferases
NW98_RS15460	SM00650	Ribosomal RNA adenine dimethylases
NW98_RS15495	SM00382	ATPases associated with a variety of cellular activities
NW98_RS15545	SM00155	Phospholipase D. Active site motifs.
NW98_RS15565	SM00834	Putative regulatory protein
NW98_RS15585	SM00978	NW98_RS15585
NW98_RS15650	SM01119	NW98_RS15650
NW98_RS15660	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS15680	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
NW98_RS15705	SM00845	GatB domain
NW98_RS15750	SM00671	Sel1-like repeats.
NW98_RS15790	SM00448	cheY-homologous receiver domain
NW98_RS15795	SM00091	PAS domain
NW98_RS15795	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS15795	SM00387	Histidine kinase-like ATPases
NW98_RS15795	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS15845	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
NW98_RS15845	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
NW98_RS15845	SM00493	NW98_RS15845
NW98_RS15975	SM00478	endonuclease III
NW98_RS15975	SM01009	AlkA N-terminal domain
NW98_RS15980	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS15995	SM01322	NW98_RS15995
NW98_RS16030	SM01234	NW98_RS16030
NW98_RS16080	SM00530	Helix-turn-helix XRE-family like proteins 
NW98_RS16090	SM00829	Enoylreductase
NW98_RS16100	SM00867	YceI-like domain 
NW98_RS16130	SM01329	NW98_RS16130
NW98_RS16190	SM00014	Acid phosphatase homologues
NW98_RS16250	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS16270	SM00100	Cyclic nucleotide-monophosphate binding domain
NW98_RS16270	SM00419	helix_turn_helix, cAMP Regulatory protein
NW98_RS16320	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS16340	SM01092	CO dehydrogenase flavoprotein C-terminal domain
NW98_RS16345	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
NW98_RS16375	SM00382	ATPases associated with a variety of cellular activities
NW98_RS16460	SM00530	Helix-turn-helix XRE-family like proteins 
NW98_RS16465	SM00849	Metallo-beta-lactamase superfamily
NW98_RS16510	SM00829	Enoylreductase
NW98_RS16530	SM00883	Chaperonin 10 Kd subunit
NW98_RS16560	SM00732	Likely ribonuclease with RNase H fold.
NW98_RS16580	SM00563	Phosphate acyltransferases
NW98_RS16615	SM00382	ATPases associated with a variety of cellular activities
NW98_RS16680	SM00382	ATPases associated with a variety of cellular activities
NW98_RS16685	SM00382	ATPases associated with a variety of cellular activities
NW98_RS16755	SM01130	NW98_RS16755
NW98_RS16760	SM01007	Class II Aldolase and Adducin N-terminal domain
NW98_RS16765	SM00530	Helix-turn-helix XRE-family like proteins 
NW98_RS16795	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS16805	SM00387	Histidine kinase-like ATPases
NW98_RS16815	SM00986	Uracil DNA glycosylase superfamily
NW98_RS16815	SM00987	UreE urease accessory protein, C-terminal domain 
NW98_RS16860	SM00382	ATPases associated with a variety of cellular activities
NW98_RS16900	SM00478	endonuclease III
NW98_RS16940	SM00382	ATPases associated with a variety of cellular activities
NW98_RS16940	SM00843	NW98_RS16940
NW98_RS16975	SM00487	DEAD-like helicases superfamily
NW98_RS16975	SM00490	helicase superfamily c-terminal domain
NW98_RS16990	SM00450	Rhodanese Homology Domain
NW98_RS17000	SM00481	DNA polymerase alpha chain like domain
NW98_RS17005	SM00382	ATPases associated with a variety of cellular activities
NW98_RS17145	SM00316	Ribosomal protein S1-like RNA-binding domain
NW98_RS17175	SM01209	NW98_RS17175
NW98_RS17175	SM01210	NW98_RS17175
NW98_RS17200	SM00851	MGS-like domain
NW98_RS17210	SM00829	Enoylreductase
NW98_RS17250	SM00448	cheY-homologous receiver domain
NW98_RS17250	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS17285	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NW98_RS17415	SM00947	Carbonic anhydrase
NW98_RS17435	SM01387	NW98_RS17435
NW98_RS17445	SM00316	Ribosomal protein S1-like RNA-binding domain
NW98_RS17445	SM00322	K homology RNA-binding domain
NW98_RS17450	SM00829	Enoylreductase
NW98_RS17495	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
NW98_RS17500	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
NW98_RS17575	SM00710	Parallel beta-helix repeats
NW98_RS17595	SM00855	Phosphoglycerate mutase family
NW98_RS17625	SM00631	NW98_RS17625
NW98_RS17640	SM00421	helix_turn_helix, Lux Regulon
NW98_RS17710	SM00836	DALR anticodon binding domain
NW98_RS17710	SM01016	Arginyl tRNA synthetase N terminal dom
NW98_RS17740	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS17755	SM00382	ATPases associated with a variety of cellular activities
NW98_RS17760	SM00849	Metallo-beta-lactamase superfamily
NW98_RS17775	SM00947	Carbonic anhydrase
NW98_RS17815	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS17815	SM00876	Biotin and Thiamin Synthesis associated domain
NW98_RS17835	SM00098	Alkaline phosphatase homologues
NW98_RS17840	SM00098	Alkaline phosphatase homologues
NW98_RS17885	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS17890	SM00354	helix_turn _helix lactose operon repressor
NW98_RS17925	SM00905	Dihydroneopterin aldolase
NW98_RS18005	SM00746	metallochaperone-like domain
NW98_RS18085	SM00382	ATPases associated with a variety of cellular activities
NW98_RS18105	SM00363	S4 RNA-binding domain
NW98_RS18125	SM00271	DnaJ molecular chaperone homology domain
NW98_RS18190	SM00853	MutL C terminal dimerisation domain
NW98_RS18190	SM01340	NW98_RS18190
NW98_RS18240	SM00382	ATPases associated with a variety of cellular activities
NW98_RS18315	SM00822	NW98_RS18315
NW98_RS18315	SM00823	Phosphopantetheine attachment site
NW98_RS18315	SM00825	Beta-ketoacyl synthase
NW98_RS18315	SM00826	NW98_RS18315
NW98_RS18315	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NW98_RS18315	SM00829	Enoylreductase
NW98_RS18315	SM01294	NW98_RS18315
NW98_RS18365	SM00838	Elongation factor G C-terminus
NW98_RS18365	SM00889	Elongation factor G, domain IV
NW98_RS18410	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS18410	SM00866	NW98_RS18410
NW98_RS18440	SM00052	Putative diguanylate phosphodiesterase
NW98_RS18465	SM00100	Cyclic nucleotide-monophosphate binding domain
NW98_RS18465	SM00419	helix_turn_helix, cAMP Regulatory protein
NW98_RS18530	SM00357	Cold shock protein domain
NW98_RS18540	SM00382	ATPases associated with a variety of cellular activities
NW98_RS18540	SM01086	C-terminal, D2-small domain, of ClpB protein
NW98_RS18585	SM00904	Riboflavin kinase
NW98_RS18685	SM00316	Ribosomal protein S1-like RNA-binding domain
NW98_RS18720	SM00382	ATPases associated with a variety of cellular activities
NW98_RS18725	SM00387	Histidine kinase-like ATPases
NW98_RS18725	SM00433	TopoisomeraseII
NW98_RS18730	SM00434	DNA Topoisomerase IV
NW98_RS18800	SM00052	Putative diguanylate phosphodiesterase
NW98_RS18800	SM00267	diguanylate cyclase
NW98_RS18880	SM00988	UreE urease accessory protein, N-terminal domain
NW98_RS18905	SM00382	ATPases associated with a variety of cellular activities
NW98_RS18940	SM00450	Rhodanese Homology Domain
NW98_RS18945	SM00650	Ribosomal RNA adenine dimethylases
NW98_RS18955	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS19155	SM00382	ATPases associated with a variety of cellular activities
NW98_RS19165	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS19205	SM00382	ATPases associated with a variety of cellular activities
NW98_RS19215	SM00463	Small MutS-related domain
NW98_RS19225	SM00843	NW98_RS19225
NW98_RS19240	SM00382	ATPases associated with a variety of cellular activities
NW98_RS19350	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS19370	SM00072	Guanylate kinase homologues.
NW98_RS19375	SM01409	NW98_RS19375
NW98_RS19380	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NW98_RS19380	SM00954	Region found in RelA / SpoT proteins
NW98_RS19540	SM00346	helix_turn_helix isocitrate lyase regulation
NW98_RS19565	SM00849	Metallo-beta-lactamase superfamily
NW98_RS19680	SM00882	Coenzyme A transferase
NW98_RS19685	SM00882	Coenzyme A transferase
NW98_RS19690	SM00998	Adenylosuccinate lyase C-terminus
NW98_RS19780	SM00382	ATPases associated with a variety of cellular activities
NW98_RS19815	SM00528	Domain in histone-like proteins of HNS family
NW98_RS19840	SM00387	Histidine kinase-like ATPases
NW98_RS19840	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS19845	SM00382	ATPases associated with a variety of cellular activities
NW98_RS19845	SM00448	cheY-homologous receiver domain
NW98_RS19885	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS19965	SM00944	Pro-kumamolisin, activation domain
NW98_RS19990	SM00267	diguanylate cyclase
NW98_RS20010	SM00822	NW98_RS20010
NW98_RS20065	SM01133	NW98_RS20065
NW98_RS20090	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
NW98_RS20105	SM00749	bacterial OsmY and nodulation domain
NW98_RS20150	SM00382	ATPases associated with a variety of cellular activities
NW98_RS20200	SM00829	Enoylreductase
NW98_RS20215	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS20215	SM01049	NW98_RS20215
NW98_RS20225	SM00387	Histidine kinase-like ATPases
NW98_RS20225	SM00448	cheY-homologous receiver domain
NW98_RS20235	SM00382	ATPases associated with a variety of cellular activities
NW98_RS20275	SM00382	ATPases associated with a variety of cellular activities
NW98_RS20300	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS20325	SM00749	bacterial OsmY and nodulation domain
NW98_RS20365	SM00829	Enoylreductase
NW98_RS20375	SM00100	Cyclic nucleotide-monophosphate binding domain
NW98_RS20375	SM00419	helix_turn_helix, cAMP Regulatory protein
NW98_RS20385	SM00822	NW98_RS20385
NW98_RS20395	SM00849	Metallo-beta-lactamase superfamily
NW98_RS20395	SM01027	Beta-Casp domain
NW98_RS20420	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS20510	SM00829	Enoylreductase
NW98_RS20685	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS20730	SM00797	Allophanate hydrolase subunit 2
NW98_RS20735	SM00796	Allophanate hydrolase subunit 1
NW98_RS20740	SM00878	Biotin carboxylase C-terminal domain
NW98_RS20815	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS20815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS20825	SM00091	PAS domain
NW98_RS20825	SM00382	ATPases associated with a variety of cellular activities
NW98_RS20875	SM00729	Elongator protein 3, MiaB family, Radical SAM
NW98_RS20885	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS20885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS20885	SM00319	Homologues of the ligand binding domain of Tar
NW98_RS21065	SM00382	ATPases associated with a variety of cellular activities
NW98_RS21120	SM00382	ATPases associated with a variety of cellular activities
NW98_RS21155	SM00382	ATPases associated with a variety of cellular activities
NW98_RS21175	SM00829	Enoylreductase
NW98_RS21185	SM01120	NW98_RS21185
NW98_RS21330	SM00460	Transglutaminase/protease-like homologues
NW98_RS21335	SM00460	Transglutaminase/protease-like homologues
NW98_RS21350	SM00460	Transglutaminase/protease-like homologues
NW98_RS21355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS21375	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS21465	SM00937	NW98_RS21465
NW98_RS21505	SM00382	ATPases associated with a variety of cellular activities
NW98_RS21545	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS21595	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
NW98_RS21605	SM00986	Uracil DNA glycosylase superfamily
NW98_RS21605	SM00987	UreE urease accessory protein, C-terminal domain 
NW98_RS21610	SM01118	NW98_RS21610
NW98_RS21665	SM00925	MltA specific insert domain
NW98_RS21800	SM00226	Low molecular weight phosphatase family
NW98_RS21810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NW98_RS21850	SM00382	ATPases associated with a variety of cellular activities
NW98_RS21860	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS21915	SM01007	Class II Aldolase and Adducin N-terminal domain
NW98_RS21930	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS21930	SM00895	NW98_RS21930
NW98_RS21985	SM00421	helix_turn_helix, Lux Regulon
NW98_RS22090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS22090	SM00895	NW98_RS22090
NW98_RS22145	SM00421	helix_turn_helix, Lux Regulon
NW98_RS22145	SM00448	cheY-homologous receiver domain
NW98_RS22175	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS22270	SM00346	helix_turn_helix isocitrate lyase regulation
NW98_RS22280	SM00382	ATPases associated with a variety of cellular activities
NW98_RS22290	SM00858	NW98_RS22290
NW98_RS22320	SM00822	NW98_RS22320
NW98_RS22395	SM00346	helix_turn_helix isocitrate lyase regulation
NW98_RS22405	SM00052	Putative diguanylate phosphodiesterase
NW98_RS22455	SM00052	Putative diguanylate phosphodiesterase
NW98_RS22455	SM00267	diguanylate cyclase
NW98_RS22465	SM00344	helix_turn_helix ASNC type
NW98_RS22535	SM00091	PAS domain
NW98_RS22535	SM00387	Histidine kinase-like ATPases
NW98_RS22540	SM00448	cheY-homologous receiver domain
NW98_RS22555	SM01359	NW98_RS22555
NW98_RS22555	SM01360	NW98_RS22555
NW98_RS22655	SM00530	Helix-turn-helix XRE-family like proteins 
NW98_RS22685	SM00421	helix_turn_helix, Lux Regulon
NW98_RS22685	SM00448	cheY-homologous receiver domain
NW98_RS22770	SM00530	Helix-turn-helix XRE-family like proteins 
NW98_RS22775	SM00528	Domain in histone-like proteins of HNS family
NW98_RS22860	SM00382	ATPases associated with a variety of cellular activities
NW98_RS22885	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NW98_RS22980	SM00487	DEAD-like helicases superfamily
NW98_RS22980	SM00490	helicase superfamily c-terminal domain
NW98_RS23095	SM00421	helix_turn_helix, Lux Regulon
NW98_RS23120	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS23150	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NW98_RS23180	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW98_RS23210	SM00421	helix_turn_helix, Lux Regulon
NW98_RS23240	SM00346	helix_turn_helix isocitrate lyase regulation
NW98_RS23285	SM00346	helix_turn_helix isocitrate lyase regulation
NW98_RS23360	SM00344	helix_turn_helix ASNC type
NW98_RS23445	SM00822	NW98_RS23445
NW98_RS23465	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS23470	SM00422	helix_turn_helix, mercury resistance
NW98_RS23490	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS23490	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS23595	SM00257	Lysin motif
NW98_RS23630	SM00382	ATPases associated with a variety of cellular activities
NW98_RS23635	SM00382	ATPases associated with a variety of cellular activities
NW98_RS23710	SM00869	Autotransporter beta-domain
NW98_RS23735	SM00835	Cupin
NW98_RS23765	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS23780	SM00831	Cation transporter/ATPase, N-terminus
NW98_RS23845	SM00382	ATPases associated with a variety of cellular activities
NW98_RS23925	SM00448	cheY-homologous receiver domain
NW98_RS23930	SM00850	LytTr DNA-binding domain
NW98_RS23955	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS23970	SM00028	Tetratricopeptide repeats
NW98_RS23975	SM00825	Beta-ketoacyl synthase
NW98_RS24035	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NW98_RS24065	SM00825	Beta-ketoacyl synthase
NW98_RS24080	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW98_RS24085	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS24090	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW98_RS24140	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS24165	SM00867	YceI-like domain 
NW98_RS24210	SM00382	ATPases associated with a variety of cellular activities
NW98_RS24290	SM00448	cheY-homologous receiver domain
NW98_RS24290	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS24360	SM00382	ATPases associated with a variety of cellular activities
NW98_RS24410	SM00320	WD40 repeats
NW98_RS24510	SM00420	helix_turn_helix, Deoxyribose operon repressor
NW98_RS24510	SM01134	NW98_RS24510
NW98_RS24560	SM00829	Enoylreductase
NW98_RS24565	SM00382	ATPases associated with a variety of cellular activities
NW98_RS24570	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS24600	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW98_RS24635	SM00448	cheY-homologous receiver domain
NW98_RS24635	SM01012	NW98_RS24635
NW98_RS24715	SM00822	NW98_RS24715
NW98_RS24745	SM00829	Enoylreductase
NW98_RS24815	SM00823	Phosphopantetheine attachment site
NW98_RS24820	SM00923	MbtH-like protein
NW98_RS24830	SM00824	Thioesterase
NW98_RS24890	SM00267	diguanylate cyclase
NW98_RS24955	SM00382	ATPases associated with a variety of cellular activities
NW98_RS25025	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
NW98_RS25060	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS25075	SM00344	helix_turn_helix ASNC type
NW98_RS25090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS25090	SM00866	NW98_RS25090
NW98_RS25155	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NW98_RS25185	SM00530	Helix-turn-helix XRE-family like proteins 
NW98_RS25195	SM00450	Rhodanese Homology Domain
NW98_RS25315	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
NW98_RS25315	SM00091	PAS domain
NW98_RS25315	SM00387	Histidine kinase-like ATPases
NW98_RS25315	SM00448	cheY-homologous receiver domain
NW98_RS25320	SM00448	cheY-homologous receiver domain
NW98_RS25325	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
NW98_RS25325	SM00091	PAS domain
NW98_RS25325	SM00387	Histidine kinase-like ATPases
NW98_RS25325	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS25370	SM00357	Cold shock protein domain
NW98_RS25400	SM00905	Dihydroneopterin aldolase
NW98_RS25560	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS25655	SM00387	Histidine kinase-like ATPases
NW98_RS25655	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS25660	SM00448	cheY-homologous receiver domain
NW98_RS25660	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS25675	SM00382	ATPases associated with a variety of cellular activities
NW98_RS25685	SM00829	Enoylreductase
NW98_RS25690	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS25730	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS25745	SM00448	cheY-homologous receiver domain
NW98_RS25745	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS25750	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS25750	SM00387	Histidine kinase-like ATPases
NW98_RS25750	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS25805	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS25815	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
NW98_RS25840	SM00421	helix_turn_helix, Lux Regulon
NW98_RS25855	SM00421	helix_turn_helix, Lux Regulon
NW98_RS25945	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
NW98_RS25995	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS26000	SM00450	Rhodanese Homology Domain
NW98_RS26025	SM00448	cheY-homologous receiver domain
NW98_RS26025	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS26030	SM00387	Histidine kinase-like ATPases
NW98_RS26030	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS26085	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
NW98_RS26110	SM00387	Histidine kinase-like ATPases
NW98_RS26110	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS26115	SM00448	cheY-homologous receiver domain
NW98_RS26115	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS26170	SM00878	Biotin carboxylase C-terminal domain
NW98_RS26170	SM01209	NW98_RS26170
NW98_RS26245	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
NW98_RS26285	SM00387	Histidine kinase-like ATPases
NW98_RS26285	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS26290	SM00448	cheY-homologous receiver domain
NW98_RS26290	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS26330	SM01150	NW98_RS26330
NW98_RS26370	SM00155	Phospholipase D. Active site motifs.
NW98_RS26380	SM00420	helix_turn_helix, Deoxyribose operon repressor
NW98_RS26380	SM01134	NW98_RS26380
NW98_RS26405	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS26405	SM00895	NW98_RS26405
NW98_RS26410	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
NW98_RS26415	SM00829	Enoylreductase
NW98_RS26490	SM00644	NW98_RS26490
NW98_RS26515	SM00448	cheY-homologous receiver domain
NW98_RS26515	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS26520	SM00387	Histidine kinase-like ATPases
NW98_RS26560	SM00382	ATPases associated with a variety of cellular activities
NW98_RS26560	SM01086	C-terminal, D2-small domain, of ClpB protein
NW98_RS26705	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS26720	SM00421	helix_turn_helix, Lux Regulon
NW98_RS26720	SM00448	cheY-homologous receiver domain
NW98_RS26770	SM00528	Domain in histone-like proteins of HNS family
NW98_RS26825	SM00382	ATPases associated with a variety of cellular activities
NW98_RS26850	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS26900	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS26935	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS26975	SM00944	Pro-kumamolisin, activation domain
NW98_RS26985	SM00344	helix_turn_helix ASNC type
NW98_RS27040	SM00421	helix_turn_helix, Lux Regulon
NW98_RS27070	SM00382	ATPases associated with a variety of cellular activities
NW98_RS27115	SM00028	Tetratricopeptide repeats
NW98_RS27135	SM00530	Helix-turn-helix XRE-family like proteins 
NW98_RS27265	SM00382	ATPases associated with a variety of cellular activities
NW98_RS27275	SM00448	cheY-homologous receiver domain
NW98_RS27275	SM00862	Transcriptional regulatory protein, C terminal
NW98_RS27280	SM00387	Histidine kinase-like ATPases
NW98_RS27315	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS27405	SM00382	ATPases associated with a variety of cellular activities
NW98_RS27440	SM00824	Thioesterase
NW98_RS27530	SM00387	Histidine kinase-like ATPases
NW98_RS27530	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS27535	SM00897	FIST N domain
NW98_RS27535	SM01204	NW98_RS27535
NW98_RS27540	SM00448	cheY-homologous receiver domain
NW98_RS27555	SM00458	Ricin-type beta-trefoil
NW98_RS27615	SM01217	NW98_RS27615
NW98_RS27690	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS27700	SM00382	ATPases associated with a variety of cellular activities
NW98_RS27720	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS27775	SM00411	bacterial (prokaryotic) histone like domain
NW98_RS27925	SM00859	Semialdehyde dehydrogenase, NAD binding domain
NW98_RS27935	SM01329	NW98_RS27935
NW98_RS27985	SM00344	helix_turn_helix ASNC type
NW98_RS28025	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS28065	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS28065	SM00866	NW98_RS28065
NW98_RS28095	SM00912	haemagglutination activity domain
NW98_RS28135	SM00382	ATPases associated with a variety of cellular activities
NW98_RS28140	SM00345	helix_turn_helix gluconate operon transcriptional repressor
NW98_RS28175	SM00257	Lysin motif
NW98_RS28190	SM01350	NW98_RS28190
NW98_RS28250	SM00382	ATPases associated with a variety of cellular activities
NW98_RS28250	SM01086	C-terminal, D2-small domain, of ClpB protein
NW98_RS28290	SM00219	Tyrosine kinase, catalytic domain
NW98_RS28405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
NW98_RS28405	SM00450	Rhodanese Homology Domain
NW98_RS28410	SM00849	Metallo-beta-lactamase superfamily
NW98_RS28470	SM00346	helix_turn_helix isocitrate lyase regulation
NW98_RS28485	SM00881	CoA binding domain
NW98_RS28500	SM00528	Domain in histone-like proteins of HNS family
NW98_RS28515	SM00382	ATPases associated with a variety of cellular activities
NW98_RS28540	SM00450	Rhodanese Homology Domain
NW98_RS28555	SM00382	ATPases associated with a variety of cellular activities
NW98_RS28560	SM00382	ATPases associated with a variety of cellular activities
NW98_RS28580	SM00530	Helix-turn-helix XRE-family like proteins 
NW98_RS28650	SM00400	zinc finger
NW98_RS28650	SM00493	NW98_RS28650
NW98_RS28650	SM00766	DNA primase DnaG DnaB-binding
NW98_RS28685	SM00861	Transketolase, pyrimidine binding domain
NW98_RS28710	SM00450	Rhodanese Homology Domain
NW98_RS28740	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
NW98_RS28740	SM00474	3'-5' exonuclease
NW98_RS28740	SM00475	5'-3' exonuclease
NW98_RS28740	SM00482	DNA polymerase A domain
NW98_RS28840	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS28860	SM00014	Acid phosphatase homologues
NW98_RS28875	SM00382	ATPases associated with a variety of cellular activities
NW98_RS28895	SM00880	NW98_RS28895
NW98_RS28915	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS28920	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW98_RS28920	SM01091	Transporter associated domain
NW98_RS28970	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS29035	SM00644	NW98_RS29035
NW98_RS29135	SM00829	Enoylreductase
NW98_RS29150	SM00822	NW98_RS29150
NW98_RS29165	SM00855	Phosphoglycerate mutase family
NW98_RS29230	SM00382	ATPases associated with a variety of cellular activities
NW98_RS29240	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS29290	SM00448	cheY-homologous receiver domain
NW98_RS29295	SM00073	Histidine Phosphotransfer domain
NW98_RS29295	SM00260	Two component signalling adaptor domain
NW98_RS29295	SM00387	Histidine kinase-like ATPases
NW98_RS29295	SM00448	cheY-homologous receiver domain
NW98_RS29300	SM00260	Two component signalling adaptor domain
NW98_RS29305	SM00028	Tetratricopeptide repeats
NW98_RS29305	SM00138	Methyltransferase, chemotaxis proteins 
NW98_RS29310	SM00260	Two component signalling adaptor domain
NW98_RS29315	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
NW98_RS29315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
NW98_RS29320	SM00387	Histidine kinase-like ATPases
NW98_RS29320	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS29320	SM00448	cheY-homologous receiver domain
NW98_RS29365	SM00155	Phospholipase D. Active site motifs.
NW98_RS29395	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS29405	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
NW98_RS29450	SM00342	helix_turn_helix, arabinose operon control protein
NW98_RS29500	SM00347	helix_turn_helix multiple antibiotic resistance protein
NW98_RS29565	SM00346	helix_turn_helix isocitrate lyase regulation
NW98_RS29715	SM00822	NW98_RS29715
NW98_RS29735	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
NW98_RS29735	SM00091	PAS domain
NW98_RS29735	SM00387	Histidine kinase-like ATPases
NW98_RS29735	SM00388	His Kinase A (phosphoacceptor) domain
NW98_RS29735	SM00448	cheY-homologous receiver domain
NW98_RS29750	SM00382	ATPases associated with a variety of cellular activities
NW98_RS29750	SM00448	cheY-homologous receiver domain
NW98_RS29765	SM00382	ATPases associated with a variety of cellular activities
NW98_RS29810	SM00382	ATPases associated with a variety of cellular activities
NW98_RS29810	SM00448	cheY-homologous receiver domain
NW98_RS29880	SM00903	Flavin reductase like domain
NW98_RS29910	SM00861	Transketolase, pyrimidine binding domain
NW98_RS30030	SM00116	Domain in cystathionine beta-synthase and other proteins.
NW98_RS30070	SM00421	helix_turn_helix, Lux Regulon
NW98_RS30080	SM00829	Enoylreductase
NW98_RS30105	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
NW98_RS30255	SM00387	Histidine kinase-like ATPases
NW98_RS30255	SM01049	NW98_RS30255
NW98_RS30260	SM00421	helix_turn_helix, Lux Regulon
NW98_RS30260	SM00448	cheY-homologous receiver domain
NW98_RS30300	SM00052	Putative diguanylate phosphodiesterase
NW98_RS30300	SM00267	diguanylate cyclase
NW98_RS30345	SM00382	ATPases associated with a variety of cellular activities
NW98_RS30355	SM00822	NW98_RS30355
NW98_RS30360	SM00822	NW98_RS30360
NW98_RS30360	SM00825	Beta-ketoacyl synthase
NW98_RS30365	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
NW98_RS30395	SM00382	ATPases associated with a variety of cellular activities
NW98_RS30405	SM00062	Bacterial periplasmic substrate-binding proteins
NW98_RS30405	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
NW98_RS30445	SM00091	PAS domain
NW98_RS30445	SM00267	diguanylate cyclase
NW98_RS30455	SM00448	cheY-homologous receiver domain
NW98_RS30465	SM00387	Histidine kinase-like ATPases
NW98_RS30465	SM00448	cheY-homologous receiver domain
NW98_RS30495	SM00470	ParB-like nuclease domain
