AMS56_RS00060	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMS56_RS00060	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMS56_RS00060	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMS56_RS00060	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMS56_RS00090	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMS56_RS00090	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AMS56_RS00090	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AMS56_RS00095	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AMS56_RS00100	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AMS56_RS00115	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMS56_RS00115	PWY-5491	diethylphosphate degradation
AMS56_RS00120	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMS56_RS00120	PWY-5491	diethylphosphate degradation
AMS56_RS00195	PWY-2941	L-lysine biosynthesis II
AMS56_RS00195	PWY-2942	L-lysine biosynthesis III
AMS56_RS00195	PWY-5097	L-lysine biosynthesis VI
AMS56_RS00265	PWY-5074	mevalonate degradation
AMS56_RS00295	PWY-723	alkylnitronates degradation
AMS56_RS00360	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMS56_RS00360	PWY-6148	tetrahydromethanopterin biosynthesis
AMS56_RS00360	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMS56_RS00360	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMS56_RS00375	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMS56_RS00375	PWY-5667	CDP-diacylglycerol biosynthesis I
AMS56_RS00375	PWY-6453	stigma estolide biosynthesis
AMS56_RS00375	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AMS56_RS00375	PWY-7587	oleate biosynthesis III (cyanobacteria)
AMS56_RS00380	PWY-6749	CMP-legionaminate biosynthesis I
AMS56_RS00460	PWY-4983	L-citrulline-nitric oxide cycle
AMS56_RS00460	PWY-4984	urea cycle
AMS56_RS00460	PWY-5	canavanine biosynthesis
AMS56_RS00460	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS00460	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS00465	PWY-4081	glutathione redox reactions I
AMS56_RS00500	PWY-5129	sphingolipid biosynthesis (plants)
AMS56_RS00840	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS00855	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AMS56_RS00855	PWY-7494	choline degradation IV
AMS56_RS00920	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMS56_RS00920	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AMS56_RS00930	PWY-2941	L-lysine biosynthesis II
AMS56_RS00930	PWY-5097	L-lysine biosynthesis VI
AMS56_RS00985	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS00985	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS01000	PWY-5344	L-homocysteine biosynthesis
AMS56_RS01045	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMS56_RS01095	PWY-6703	preQ<sub>0</sub> biosynthesis
AMS56_RS01100	PWY-6703	preQ<sub>0</sub> biosynthesis
AMS56_RS01370	PWY-6825	phosphatidylcholine biosynthesis V
AMS56_RS01460	PWY-43	putrescine biosynthesis II
AMS56_RS01500	PWY-6840	homoglutathione biosynthesis
AMS56_RS01500	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMS56_RS01730	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMS56_RS01730	PWY-5109	2-methylbutanoate biosynthesis
AMS56_RS01730	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMS56_RS01730	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMS56_RS01730	PWY-5177	glutaryl-CoA degradation
AMS56_RS01730	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMS56_RS01730	PWY-6435	4-hydroxybenzoate biosynthesis V
AMS56_RS01730	PWY-6583	pyruvate fermentation to butanol I
AMS56_RS01730	PWY-6863	pyruvate fermentation to hexanol
AMS56_RS01730	PWY-6883	pyruvate fermentation to butanol II
AMS56_RS01730	PWY-6944	androstenedione degradation
AMS56_RS01730	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMS56_RS01730	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMS56_RS01730	PWY-7007	methyl ketone biosynthesis
AMS56_RS01730	PWY-7046	4-coumarate degradation (anaerobic)
AMS56_RS01730	PWY-7094	fatty acid salvage
AMS56_RS01730	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMS56_RS01730	PWY-735	jasmonic acid biosynthesis
AMS56_RS01730	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMS56_RS01730	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMS56_RS01730	PWY-7726	AMS56_RS01730
AMS56_RS01770	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AMS56_RS01770	PWY-7494	choline degradation IV
AMS56_RS02050	PWY-6840	homoglutathione biosynthesis
AMS56_RS02050	PWY-7255	ergothioneine biosynthesis I (bacteria)
AMS56_RS02095	PWY-7158	L-phenylalanine degradation V
AMS56_RS02100	PWY-6134	L-tyrosine biosynthesis IV
AMS56_RS02100	PWY-7158	L-phenylalanine degradation V
AMS56_RS02120	PWY-5642	2,4-dinitrotoluene degradation
AMS56_RS02120	PWY-6373	acrylate degradation
AMS56_RS02125	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AMS56_RS02125	PWY-7494	choline degradation IV
AMS56_RS02230	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS02240	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS02265	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AMS56_RS02265	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AMS56_RS02280	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AMS56_RS02280	PWY-6853	ethylene biosynthesis II (microbes)
AMS56_RS02280	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMS56_RS02420	PWY-6986	alginate degradation
AMS56_RS02750	PWY-4381	fatty acid biosynthesis initiation I
AMS56_RS02760	PWY-4381	fatty acid biosynthesis initiation I
AMS56_RS02930	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMS56_RS02940	PWY-2201	folate transformations I
AMS56_RS02940	PWY-3841	folate transformations II
AMS56_RS02945	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMS56_RS02955	PWY-723	alkylnitronates degradation
AMS56_RS03005	PWY-2201	folate transformations I
AMS56_RS03105	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS03105	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS03120	PWY-5686	UMP biosynthesis
AMS56_RS03125	PWY-1281	sulfoacetaldehyde degradation I
AMS56_RS03125	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMS56_RS03125	PWY-5482	pyruvate fermentation to acetate II
AMS56_RS03125	PWY-5485	pyruvate fermentation to acetate IV
AMS56_RS03125	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS03125	PWY-6637	sulfolactate degradation II
AMS56_RS03125	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMS56_RS03185	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AMS56_RS03465	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMS56_RS03465	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMS56_RS03500	PWY-2941	L-lysine biosynthesis II
AMS56_RS03500	PWY-2942	L-lysine biosynthesis III
AMS56_RS03500	PWY-5097	L-lysine biosynthesis VI
AMS56_RS03540	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMS56_RS03545	PWY-6164	3-dehydroquinate biosynthesis I
AMS56_RS03625	PWY-6891	thiazole biosynthesis II (Bacillus)
AMS56_RS03625	PWY-6892	thiazole biosynthesis I (E. coli)
AMS56_RS03630	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMS56_RS03630	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMS56_RS03630	PWY-6897	thiamin salvage II
AMS56_RS03630	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMS56_RS03630	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMS56_RS03630	PWY-7356	thiamin salvage IV (yeast)
AMS56_RS03630	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMS56_RS03680	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMS56_RS03680	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMS56_RS03770	PWY-3781	aerobic respiration I (cytochrome c)
AMS56_RS03770	PWY-6692	Fe(II) oxidation
AMS56_RS03770	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AMS56_RS03770	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMS56_RS04080	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMS56_RS04210	PWY-5958	acridone alkaloid biosynthesis
AMS56_RS04210	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMS56_RS04210	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMS56_RS04215	PWY-5958	acridone alkaloid biosynthesis
AMS56_RS04215	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMS56_RS04215	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMS56_RS04220	PWY-181	photorespiration
AMS56_RS04225	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMS56_RS04225	PWY-5723	Rubisco shunt
AMS56_RS04240	PWY-1341	phenylacetate degradation II (anaerobic)
AMS56_RS04240	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AMS56_RS04240	PWY-7716	AMS56_RS04240
AMS56_RS04255	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMS56_RS04255	PWY-2361	3-oxoadipate degradation
AMS56_RS04255	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AMS56_RS04320	PWY-2201	folate transformations I
AMS56_RS04340	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMS56_RS04340	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMS56_RS04345	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMS56_RS04345	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMS56_RS04345	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMS56_RS04350	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMS56_RS04350	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMS56_RS04360	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMS56_RS04360	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMS56_RS04360	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMS56_RS04360	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMS56_RS04365	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMS56_RS04365	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMS56_RS04370	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMS56_RS04370	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMS56_RS04395	PWY-2201	folate transformations I
AMS56_RS04395	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS04410	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS04485	PWY-3341	L-proline biosynthesis III
AMS56_RS04485	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMS56_RS04535	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMS56_RS04535	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMS56_RS04535	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMS56_RS04535	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMS56_RS04535	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS04535	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS04535	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMS56_RS04535	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMS56_RS04540	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMS56_RS04540	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMS56_RS04540	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMS56_RS04540	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMS56_RS04540	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS04540	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS04540	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMS56_RS04540	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMS56_RS04585	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMS56_RS04585	PWY-6416	quinate degradation II
AMS56_RS04585	PWY-6707	gallate biosynthesis
AMS56_RS04615	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMS56_RS04640	PWY-7130	L-glucose degradation
AMS56_RS04645	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMS56_RS04645	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMS56_RS04645	PWY-7242	D-fructuronate degradation
AMS56_RS04645	PWY-7310	D-glucosaminate degradation
AMS56_RS04645	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AMS56_RS04680	PWY-5686	UMP biosynthesis
AMS56_RS04695	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AMS56_RS04695	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AMS56_RS04695	PWY-6896	thiamin salvage I
AMS56_RS04695	PWY-6897	thiamin salvage II
AMS56_RS04700	PWY-1281	sulfoacetaldehyde degradation I
AMS56_RS04700	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMS56_RS04700	PWY-5482	pyruvate fermentation to acetate II
AMS56_RS04700	PWY-5485	pyruvate fermentation to acetate IV
AMS56_RS04700	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS04700	PWY-6637	sulfolactate degradation II
AMS56_RS04700	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMS56_RS04720	PWY-2201	folate transformations I
AMS56_RS04735	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMS56_RS04735	PWY-5723	Rubisco shunt
AMS56_RS04735	PWY-6891	thiazole biosynthesis II (Bacillus)
AMS56_RS04735	PWY-6892	thiazole biosynthesis I (E. coli)
AMS56_RS04735	PWY-6901	superpathway of glucose and xylose degradation
AMS56_RS04735	PWY-7560	methylerythritol phosphate pathway II
AMS56_RS04740	PWY-1042	glycolysis IV (plant cytosol)
AMS56_RS04740	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMS56_RS04740	PWY-6901	superpathway of glucose and xylose degradation
AMS56_RS04740	PWY-7003	glycerol degradation to butanol
AMS56_RS04750	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMS56_RS04750	PWY-6416	quinate degradation II
AMS56_RS04750	PWY-6707	gallate biosynthesis
AMS56_RS04755	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMS56_RS04755	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMS56_RS04755	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMS56_RS04755	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMS56_RS04775	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
AMS56_RS04780	PWY-5694	allantoin degradation to glyoxylate I
AMS56_RS04780	PWY-5705	allantoin degradation to glyoxylate III
AMS56_RS04795	PWY-2941	L-lysine biosynthesis II
AMS56_RS04795	PWY-2942	L-lysine biosynthesis III
AMS56_RS04795	PWY-5097	L-lysine biosynthesis VI
AMS56_RS04825	PWY-3341	L-proline biosynthesis III
AMS56_RS04825	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMS56_RS04840	PWY-5101	L-isoleucine biosynthesis II
AMS56_RS04840	PWY-5103	L-isoleucine biosynthesis III
AMS56_RS04840	PWY-5104	L-isoleucine biosynthesis IV
AMS56_RS04840	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMS56_RS04845	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMS56_RS04845	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMS56_RS04845	PWY-7242	D-fructuronate degradation
AMS56_RS04845	PWY-7310	D-glucosaminate degradation
AMS56_RS04845	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AMS56_RS04855	PWY-5530	sorbitol biosynthesis II
AMS56_RS04855	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMS56_RS04860	PWY-6123	inosine-5'-phosphate biosynthesis I
AMS56_RS04860	PWY-6124	inosine-5'-phosphate biosynthesis II
AMS56_RS04860	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS04860	PWY-7234	inosine-5'-phosphate biosynthesis III
AMS56_RS04930	PWY-5686	UMP biosynthesis
AMS56_RS05025	PWY-6123	inosine-5'-phosphate biosynthesis I
AMS56_RS05025	PWY-6124	inosine-5'-phosphate biosynthesis II
AMS56_RS05025	PWY-7234	inosine-5'-phosphate biosynthesis III
AMS56_RS05115	PWY-6825	phosphatidylcholine biosynthesis V
AMS56_RS05180	PWY-6700	queuosine biosynthesis
AMS56_RS05185	PWY-6700	queuosine biosynthesis
AMS56_RS05200	PWY-5506	methanol oxidation to formaldehyde IV
AMS56_RS05225	PWY-5532	adenosine nucleotides degradation IV
AMS56_RS05230	PWY-5532	adenosine nucleotides degradation IV
AMS56_RS05240	PWY-7399	methylphosphonate degradation II
AMS56_RS05255	PWY-7399	methylphosphonate degradation II
AMS56_RS05265	PWY-7399	methylphosphonate degradation II
AMS56_RS05270	PWY-7399	methylphosphonate degradation II
AMS56_RS05290	PWY-3341	L-proline biosynthesis III
AMS56_RS05290	PWY-4981	L-proline biosynthesis II (from arginine)
AMS56_RS05290	PWY-6344	L-ornithine degradation II (Stickland reaction)
AMS56_RS05295	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMS56_RS05320	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMS56_RS05320	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMS56_RS05320	PWY-6268	adenosylcobalamin salvage from cobalamin
AMS56_RS05320	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMS56_RS05330	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMS56_RS05330	PWY-6164	3-dehydroquinate biosynthesis I
AMS56_RS05330	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMS56_RS05360	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMS56_RS05360	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMS56_RS05360	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AMS56_RS05400	PWY-5958	acridone alkaloid biosynthesis
AMS56_RS05400	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMS56_RS05400	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMS56_RS05405	PWY-6654	phosphopantothenate biosynthesis III
AMS56_RS05415	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMS56_RS05415	PWY-6148	tetrahydromethanopterin biosynthesis
AMS56_RS05415	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AMS56_RS05415	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMS56_RS05435	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMS56_RS05435	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMS56_RS05435	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMS56_RS05440	PWY-2582	brassinosteroid biosynthesis II
AMS56_RS05440	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMS56_RS05440	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMS56_RS05440	PWY-6948	sitosterol degradation to androstenedione
AMS56_RS05440	PWY-699	brassinosteroid biosynthesis I
AMS56_RS05440	PWY-7299	progesterone biosynthesis
AMS56_RS05445	PWY-2781	<i>cis</i>-zeatin biosynthesis
AMS56_RS05475	PWY-5659	GDP-mannose biosynthesis
AMS56_RS05475	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AMS56_RS05545	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AMS56_RS05550	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AMS56_RS05585	PWY-2201	folate transformations I
AMS56_RS05585	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS05650	PWY-6936	seleno-amino acid biosynthesis
AMS56_RS05650	PWY-7274	D-cycloserine biosynthesis
AMS56_RS05665	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMS56_RS05665	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMS56_RS05670	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMS56_RS05670	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMS56_RS05680	PWY-3801	sucrose degradation II (sucrose synthase)
AMS56_RS05680	PWY-6527	stachyose degradation
AMS56_RS05680	PWY-7238	sucrose biosynthesis II
AMS56_RS05680	PWY-7343	UDP-glucose biosynthesis
AMS56_RS05740	PWY-1622	formaldehyde assimilation I (serine pathway)
AMS56_RS05740	PWY-181	photorespiration
AMS56_RS05740	PWY-2161	folate polyglutamylation
AMS56_RS05740	PWY-2201	folate transformations I
AMS56_RS05740	PWY-3661	glycine betaine degradation I
AMS56_RS05740	PWY-3661-1	glycine betaine degradation II (mammalian)
AMS56_RS05740	PWY-3841	folate transformations II
AMS56_RS05740	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS05810	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMS56_RS05865	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMS56_RS05865	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AMS56_RS05880	PWY-6832	2-aminoethylphosphonate degradation II
AMS56_RS05900	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS05900	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMS56_RS05900	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AMS56_RS05900	PWY-6596	adenosine nucleotides degradation I
AMS56_RS05900	PWY-6606	guanosine nucleotides degradation II
AMS56_RS05900	PWY-6607	guanosine nucleotides degradation I
AMS56_RS05900	PWY-6608	guanosine nucleotides degradation III
AMS56_RS05900	PWY-6999	theophylline degradation
AMS56_RS05905	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS05905	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMS56_RS05905	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AMS56_RS05905	PWY-6596	adenosine nucleotides degradation I
AMS56_RS05905	PWY-6606	guanosine nucleotides degradation II
AMS56_RS05905	PWY-6607	guanosine nucleotides degradation I
AMS56_RS05905	PWY-6608	guanosine nucleotides degradation III
AMS56_RS05905	PWY-6999	theophylline degradation
AMS56_RS06090	PWY-5686	UMP biosynthesis
AMS56_RS06095	PWY-5686	UMP biosynthesis
AMS56_RS06110	PWY-3221	dTDP-L-rhamnose biosynthesis II
AMS56_RS06110	PWY-6808	dTDP-D-forosamine biosynthesis
AMS56_RS06110	PWY-6942	dTDP-D-desosamine biosynthesis
AMS56_RS06110	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMS56_RS06110	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AMS56_RS06110	PWY-6974	dTDP-L-olivose biosynthesis
AMS56_RS06110	PWY-6976	dTDP-L-mycarose biosynthesis
AMS56_RS06110	PWY-7104	dTDP-L-megosamine biosynthesis
AMS56_RS06110	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AMS56_RS06110	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AMS56_RS06110	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AMS56_RS06110	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AMS56_RS06110	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AMS56_RS06110	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AMS56_RS06110	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AMS56_RS06110	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AMS56_RS06110	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AMS56_RS06110	PWY-7688	AMS56_RS06110
AMS56_RS06115	PWY-3221	dTDP-L-rhamnose biosynthesis II
AMS56_RS06115	PWY-6808	dTDP-D-forosamine biosynthesis
AMS56_RS06115	PWY-6942	dTDP-D-desosamine biosynthesis
AMS56_RS06115	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AMS56_RS06115	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AMS56_RS06115	PWY-6974	dTDP-L-olivose biosynthesis
AMS56_RS06115	PWY-6976	dTDP-L-mycarose biosynthesis
AMS56_RS06115	PWY-7104	dTDP-L-megosamine biosynthesis
AMS56_RS06115	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AMS56_RS06115	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AMS56_RS06115	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AMS56_RS06115	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AMS56_RS06115	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AMS56_RS06115	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AMS56_RS06115	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AMS56_RS06115	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AMS56_RS06115	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AMS56_RS06115	PWY-7688	AMS56_RS06115
AMS56_RS06175	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMS56_RS06175	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMS56_RS06175	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMS56_RS06185	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMS56_RS06185	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMS56_RS06185	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMS56_RS06190	PWY-3821	galactose degradation III
AMS56_RS06190	PWY-6317	galactose degradation I (Leloir pathway)
AMS56_RS06190	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AMS56_RS06190	PWY-6527	stachyose degradation
AMS56_RS06190	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AMS56_RS06190	PWY-7344	UDP-D-galactose biosynthesis
AMS56_RS06210	PWY-6749	CMP-legionaminate biosynthesis I
AMS56_RS06225	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AMS56_RS06245	PWY-5704	urea degradation II
AMS56_RS06250	PWY-5704	urea degradation II
AMS56_RS06255	PWY-5704	urea degradation II
AMS56_RS06325	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AMS56_RS06390	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AMS56_RS06390	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AMS56_RS06390	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AMS56_RS06390	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AMS56_RS06390	PWY-6978	plastoquinol-9 biosynthesis II
AMS56_RS06410	PWY-6167	flavin biosynthesis II (archaea)
AMS56_RS06410	PWY-6168	flavin biosynthesis III (fungi)
AMS56_RS06415	PWY-6167	flavin biosynthesis II (archaea)
AMS56_RS06415	PWY-6168	flavin biosynthesis III (fungi)
AMS56_RS06415	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMS56_RS06420	PWY-6167	flavin biosynthesis II (archaea)
AMS56_RS06420	PWY-6168	flavin biosynthesis III (fungi)
AMS56_RS06420	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS06425	PWY-5525	D-glucuronate degradation I
AMS56_RS06430	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMS56_RS06475	PWY-2722	trehalose degradation IV
AMS56_RS06475	PWY-2723	trehalose degradation V
AMS56_RS06475	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMS56_RS06475	PWY-5661	GDP-glucose biosynthesis
AMS56_RS06475	PWY-621	sucrose degradation III (sucrose invertase)
AMS56_RS06475	PWY-7238	sucrose biosynthesis II
AMS56_RS06475	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMS56_RS06480	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMS56_RS06480	PWY-6855	chitin degradation I (archaea)
AMS56_RS06480	PWY-6906	chitin derivatives degradation
AMS56_RS06485	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMS56_RS06545	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AMS56_RS06635	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMS56_RS06650	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS06700	PWY-3461	L-tyrosine biosynthesis II
AMS56_RS06700	PWY-3462	L-phenylalanine biosynthesis II
AMS56_RS06700	PWY-6120	L-tyrosine biosynthesis III
AMS56_RS06700	PWY-6627	salinosporamide A biosynthesis
AMS56_RS06700	PWY-7626	bacilysin biosynthesis
AMS56_RS06755	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMS56_RS06765	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMS56_RS06765	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMS56_RS06765	PWY-6936	seleno-amino acid biosynthesis
AMS56_RS06765	PWY-702	L-methionine biosynthesis II
AMS56_RS06785	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS06785	PWY-6606	guanosine nucleotides degradation II
AMS56_RS06785	PWY-6608	guanosine nucleotides degradation III
AMS56_RS06785	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AMS56_RS06795	PWY-6610	adenine and adenosine salvage IV
AMS56_RS06815	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMS56_RS06845	PWY-1881	formate oxidation to CO<sub>2</sub>
AMS56_RS06845	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS06845	PWY-6696	oxalate degradation III
AMS56_RS06875	PWY-181	photorespiration
AMS56_RS06880	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AMS56_RS06880	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AMS56_RS06880	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AMS56_RS06880	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AMS56_RS06880	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AMS56_RS06880	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AMS56_RS06880	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AMS56_RS06880	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AMS56_RS06880	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AMS56_RS06880	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AMS56_RS06905	PWY-3461	L-tyrosine biosynthesis II
AMS56_RS06905	PWY-3462	L-phenylalanine biosynthesis II
AMS56_RS06905	PWY-6120	L-tyrosine biosynthesis III
AMS56_RS06905	PWY-6627	salinosporamide A biosynthesis
AMS56_RS06905	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AMS56_RS06905	PWY-7626	bacilysin biosynthesis
AMS56_RS06910	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMS56_RS06915	PWY-7205	CMP phosphorylation
AMS56_RS06940	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AMS56_RS06965	PWY-6936	seleno-amino acid biosynthesis
AMS56_RS07050	PWY-6829	tRNA methylation (yeast)
AMS56_RS07050	PWY-7285	methylwyosine biosynthesis
AMS56_RS07050	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AMS56_RS07110	PWY-3841	folate transformations II
AMS56_RS07110	PWY-6614	tetrahydrofolate biosynthesis
AMS56_RS07150	PWY-3841	folate transformations II
AMS56_RS07150	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMS56_RS07150	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS07150	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMS56_RS07150	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMS56_RS07150	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMS56_RS07180	PWY-5392	reductive TCA cycle II
AMS56_RS07180	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMS56_RS07180	PWY-5690	TCA cycle II (plants and fungi)
AMS56_RS07180	PWY-5913	TCA cycle VI (obligate autotrophs)
AMS56_RS07180	PWY-6728	methylaspartate cycle
AMS56_RS07180	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMS56_RS07180	PWY-7254	TCA cycle VII (acetate-producers)
AMS56_RS07180	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMS56_RS07230	PWY-5381	pyridine nucleotide cycling (plants)
AMS56_RS07265	PWY-6823	molybdenum cofactor biosynthesis
AMS56_RS07270	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AMS56_RS07270	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AMS56_RS07275	PWY-6823	molybdenum cofactor biosynthesis
AMS56_RS07305	PWY-2201	folate transformations I
AMS56_RS07330	PWY-4381	fatty acid biosynthesis initiation I
AMS56_RS07335	PWY-4381	fatty acid biosynthesis initiation I
AMS56_RS07335	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AMS56_RS07335	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMS56_RS07340	PWY-5367	petroselinate biosynthesis
AMS56_RS07340	PWY-5515	L-arabinose degradation II
AMS56_RS07340	PWY-5525	D-glucuronate degradation I
AMS56_RS07340	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMS56_RS07340	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMS56_RS07340	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMS56_RS07340	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMS56_RS07340	PWY-6113	superpathway of mycolate biosynthesis
AMS56_RS07340	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMS56_RS07340	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMS56_RS07340	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMS56_RS07340	PWY-7663	gondoate biosynthesis (anaerobic)
AMS56_RS07340	PWY-7664	oleate biosynthesis IV (anaerobic)
AMS56_RS07340	PWYG-321	mycolate biosynthesis
AMS56_RS07415	PWY-6012	acyl carrier protein metabolism I
AMS56_RS07415	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AMS56_RS07420	PWY-6902	chitin degradation II
AMS56_RS07445	PWY-5269	cardiolipin biosynthesis II
AMS56_RS07445	PWY-5668	cardiolipin biosynthesis I
AMS56_RS07550	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMS56_RS07550	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMS56_RS07565	PWY-5129	sphingolipid biosynthesis (plants)
AMS56_RS07665	PWY-3781	aerobic respiration I (cytochrome c)
AMS56_RS07665	PWY-4521	arsenite oxidation I (respiratory)
AMS56_RS07665	PWY-6692	Fe(II) oxidation
AMS56_RS07665	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMS56_RS07665	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AMS56_RS07745	PWY-723	alkylnitronates degradation
AMS56_RS07775	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS07775	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS07775	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS07780	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS07780	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS07780	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS07805	PWY-3781	aerobic respiration I (cytochrome c)
AMS56_RS07805	PWY-4521	arsenite oxidation I (respiratory)
AMS56_RS07805	PWY-6692	Fe(II) oxidation
AMS56_RS07805	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMS56_RS07820	PWY-5340	sulfate activation for sulfonation
AMS56_RS07840	PWY-6012	acyl carrier protein metabolism I
AMS56_RS07840	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AMS56_RS07845	PWY-5028	L-histidine degradation II
AMS56_RS07845	PWY-5030	L-histidine degradation III
AMS56_RS07855	PWY-5028	L-histidine degradation II
AMS56_RS07855	PWY-5030	L-histidine degradation III
AMS56_RS07865	PWY-5028	L-histidine degradation II
AMS56_RS07865	PWY-5030	L-histidine degradation III
AMS56_RS07900	PWY-381	nitrate reduction II (assimilatory)
AMS56_RS07900	PWY-5675	nitrate reduction V (assimilatory)
AMS56_RS07900	PWY-6549	L-glutamine biosynthesis III
AMS56_RS07900	PWY-6963	ammonia assimilation cycle I
AMS56_RS07900	PWY-6964	ammonia assimilation cycle II
AMS56_RS07965	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS08000	PWY-381	nitrate reduction II (assimilatory)
AMS56_RS08000	PWY-5675	nitrate reduction V (assimilatory)
AMS56_RS08000	PWY-6549	L-glutamine biosynthesis III
AMS56_RS08000	PWY-6963	ammonia assimilation cycle I
AMS56_RS08000	PWY-6964	ammonia assimilation cycle II
AMS56_RS08075	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AMS56_RS08075	PWY-2201	folate transformations I
AMS56_RS08075	PWY-3841	folate transformations II
AMS56_RS08075	PWY-5030	L-histidine degradation III
AMS56_RS08075	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS08075	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMS56_RS08090	PWY-6891	thiazole biosynthesis II (Bacillus)
AMS56_RS08090	PWY-6892	thiazole biosynthesis I (E. coli)
AMS56_RS08090	PWY-7560	methylerythritol phosphate pathway II
AMS56_RS08100	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMS56_RS08100	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMS56_RS08145	PWY-6823	molybdenum cofactor biosynthesis
AMS56_RS08145	PWY-6891	thiazole biosynthesis II (Bacillus)
AMS56_RS08145	PWY-6892	thiazole biosynthesis I (E. coli)
AMS56_RS08145	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMS56_RS08230	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMS56_RS08230	PWY-7177	UTP and CTP dephosphorylation II
AMS56_RS08230	PWY-7185	UTP and CTP dephosphorylation I
AMS56_RS08235	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMS56_RS08235	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMS56_RS08240	PWY-1042	glycolysis IV (plant cytosol)
AMS56_RS08240	PWY-1622	formaldehyde assimilation I (serine pathway)
AMS56_RS08240	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMS56_RS08240	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMS56_RS08240	PWY-5723	Rubisco shunt
AMS56_RS08240	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMS56_RS08240	PWY-6886	1-butanol autotrophic biosynthesis
AMS56_RS08240	PWY-6901	superpathway of glucose and xylose degradation
AMS56_RS08240	PWY-7003	glycerol degradation to butanol
AMS56_RS08240	PWY-7124	ethylene biosynthesis V (engineered)
AMS56_RS08240	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMS56_RS08300	PWY-2941	L-lysine biosynthesis II
AMS56_RS08300	PWY-2942	L-lysine biosynthesis III
AMS56_RS08300	PWY-5097	L-lysine biosynthesis VI
AMS56_RS08345	PWY-2301	<i>myo</i>-inositol biosynthesis
AMS56_RS08345	PWY-4702	phytate degradation I
AMS56_RS08345	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AMS56_RS08350	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMS56_RS08355	PWY-6936	seleno-amino acid biosynthesis
AMS56_RS08355	PWY-7274	D-cycloserine biosynthesis
AMS56_RS08390	PWY-4381	fatty acid biosynthesis initiation I
AMS56_RS08390	PWY-5743	3-hydroxypropanoate cycle
AMS56_RS08390	PWY-5744	glyoxylate assimilation
AMS56_RS08390	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMS56_RS08390	PWY-6679	jadomycin biosynthesis
AMS56_RS08390	PWY-6722	candicidin biosynthesis
AMS56_RS08390	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMS56_RS08400	PWY-2941	L-lysine biosynthesis II
AMS56_RS08400	PWY-2942	L-lysine biosynthesis III
AMS56_RS08400	PWY-5097	L-lysine biosynthesis VI
AMS56_RS08400	PWY-6559	spermidine biosynthesis II
AMS56_RS08400	PWY-6562	norspermidine biosynthesis
AMS56_RS08400	PWY-7153	grixazone biosynthesis
AMS56_RS08445	PWY-5340	sulfate activation for sulfonation
AMS56_RS08495	PWY-6891	thiazole biosynthesis II (Bacillus)
AMS56_RS08495	PWY-6892	thiazole biosynthesis I (E. coli)
AMS56_RS08495	PWY-7560	methylerythritol phosphate pathway II
AMS56_RS08525	PWY-5278	sulfite oxidation III
AMS56_RS08525	PWY-5340	sulfate activation for sulfonation
AMS56_RS08525	PWY-6683	sulfate reduction III (assimilatory)
AMS56_RS08525	PWY-6932	selenate reduction
AMS56_RS08540	PWY-4983	L-citrulline-nitric oxide cycle
AMS56_RS08540	PWY-4984	urea cycle
AMS56_RS08540	PWY-5	canavanine biosynthesis
AMS56_RS08540	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS08540	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS08565	PWY-6823	molybdenum cofactor biosynthesis
AMS56_RS08590	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMS56_RS08590	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMS56_RS08590	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMS56_RS08590	PWY-6113	superpathway of mycolate biosynthesis
AMS56_RS08590	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMS56_RS08590	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMS56_RS08590	PWY-7663	gondoate biosynthesis (anaerobic)
AMS56_RS08590	PWY-7664	oleate biosynthesis IV (anaerobic)
AMS56_RS08590	PWYG-321	mycolate biosynthesis
AMS56_RS08625	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMS56_RS08680	PWY-6728	methylaspartate cycle
AMS56_RS08680	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMS56_RS08680	PWY-7118	chitin degradation to ethanol
AMS56_RS08680	PWY-7294	xylose degradation IV
AMS56_RS08680	PWY-7295	L-arabinose degradation IV
AMS56_RS08685	PWY-7425	2-chloroacrylate degradation I
AMS56_RS08700	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMS56_RS08715	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMS56_RS08715	PWY-5368	dimorphecolate biosynthesis
AMS56_RS08715	PWY-5995	linoleate biosynthesis I (plants)
AMS56_RS08715	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMS56_RS08715	PWY-6803	phosphatidylcholine acyl editing
AMS56_RS08715	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMS56_RS08715	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMS56_RS08715	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMS56_RS08715	PWY-7470	phosphatidylcholine biosynthesis VII
AMS56_RS08715	PWY-7618	ricinoleate biosynthesis
AMS56_RS08740	PWY-6910	hydroxymethylpyrimidine salvage
AMS56_RS08740	PWY-7356	thiamin salvage IV (yeast)
AMS56_RS08740	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AMS56_RS08750	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMS56_RS08885	PWY-5667	CDP-diacylglycerol biosynthesis I
AMS56_RS08885	PWY-5981	CDP-diacylglycerol biosynthesis III
AMS56_RS08890	PWY-7294	xylose degradation IV
AMS56_RS08890	PWY-7295	L-arabinose degradation IV
AMS56_RS08890	PWY-7560	methylerythritol phosphate pathway II
AMS56_RS08915	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMS56_RS08915	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMS56_RS08915	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMS56_RS08915	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMS56_RS08915	PWY-6113	superpathway of mycolate biosynthesis
AMS56_RS08915	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMS56_RS08915	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMS56_RS08915	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMS56_RS08915	PWY-7663	gondoate biosynthesis (anaerobic)
AMS56_RS08915	PWY-7664	oleate biosynthesis IV (anaerobic)
AMS56_RS08915	PWYG-321	mycolate biosynthesis
AMS56_RS08925	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMS56_RS08925	PWY-622	starch biosynthesis
AMS56_RS08955	PWY-6745	phytochelatins biosynthesis
AMS56_RS08960	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMS56_RS09010	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMS56_RS09010	PWY-6596	adenosine nucleotides degradation I
AMS56_RS09010	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS09020	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS09095	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMS56_RS09095	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMS56_RS09105	PWY-5691	urate degradation to allantoin I
AMS56_RS09105	PWY-7394	urate degradation to allantoin II
AMS56_RS09110	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
AMS56_RS09115	PWY-5694	allantoin degradation to glyoxylate I
AMS56_RS09115	PWY-5705	allantoin degradation to glyoxylate III
AMS56_RS09125	PWY-5691	urate degradation to allantoin I
AMS56_RS09125	PWY-7394	urate degradation to allantoin II
AMS56_RS09190	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS09205	PWY-7560	methylerythritol phosphate pathway II
AMS56_RS09210	PWY-7560	methylerythritol phosphate pathway II
AMS56_RS09325	PWY-6654	phosphopantothenate biosynthesis III
AMS56_RS09415	PWY-3801	sucrose degradation II (sucrose synthase)
AMS56_RS09415	PWY-5054	sorbitol biosynthesis I
AMS56_RS09415	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AMS56_RS09415	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMS56_RS09415	PWY-5659	GDP-mannose biosynthesis
AMS56_RS09415	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMS56_RS09415	PWY-621	sucrose degradation III (sucrose invertase)
AMS56_RS09415	PWY-622	starch biosynthesis
AMS56_RS09415	PWY-6981	chitin biosynthesis
AMS56_RS09415	PWY-6992	1,5-anhydrofructose degradation
AMS56_RS09415	PWY-7238	sucrose biosynthesis II
AMS56_RS09415	PWY-7347	sucrose biosynthesis III
AMS56_RS09415	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMS56_RS09420	PWY-6938	NADH repair
AMS56_RS09435	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMS56_RS09435	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMS56_RS09435	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMS56_RS09475	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMS56_RS09475	PWY-5109	2-methylbutanoate biosynthesis
AMS56_RS09475	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMS56_RS09475	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMS56_RS09475	PWY-5177	glutaryl-CoA degradation
AMS56_RS09475	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMS56_RS09475	PWY-6435	4-hydroxybenzoate biosynthesis V
AMS56_RS09475	PWY-6583	pyruvate fermentation to butanol I
AMS56_RS09475	PWY-6863	pyruvate fermentation to hexanol
AMS56_RS09475	PWY-6883	pyruvate fermentation to butanol II
AMS56_RS09475	PWY-6944	androstenedione degradation
AMS56_RS09475	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMS56_RS09475	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMS56_RS09475	PWY-7007	methyl ketone biosynthesis
AMS56_RS09475	PWY-7046	4-coumarate degradation (anaerobic)
AMS56_RS09475	PWY-7094	fatty acid salvage
AMS56_RS09475	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMS56_RS09475	PWY-735	jasmonic acid biosynthesis
AMS56_RS09475	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMS56_RS09475	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMS56_RS09475	PWY-7726	AMS56_RS09475
AMS56_RS09535	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMS56_RS09535	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMS56_RS09535	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS09535	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMS56_RS09535	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMS56_RS09535	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMS56_RS09760	PWY-6823	molybdenum cofactor biosynthesis
AMS56_RS09770	PWY-6823	molybdenum cofactor biosynthesis
AMS56_RS09840	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS09875	PWY-5381	pyridine nucleotide cycling (plants)
AMS56_RS09875	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMS56_RS09875	PWY-6596	adenosine nucleotides degradation I
AMS56_RS09875	PWY-6606	guanosine nucleotides degradation II
AMS56_RS09875	PWY-6607	guanosine nucleotides degradation I
AMS56_RS09875	PWY-6608	guanosine nucleotides degradation III
AMS56_RS09875	PWY-7185	UTP and CTP dephosphorylation I
AMS56_RS09920	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMS56_RS09920	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMS56_RS09920	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMS56_RS09920	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS09920	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMS56_RS09920	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMS56_RS09920	PWY-7205	CMP phosphorylation
AMS56_RS09920	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMS56_RS09920	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS09920	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS09920	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS09920	PWY-7224	purine deoxyribonucleosides salvage
AMS56_RS09920	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMS56_RS09920	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMS56_RS09925	PWY-2201	folate transformations I
AMS56_RS09990	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS10060	PWY-5676	acetyl-CoA fermentation to butanoate II
AMS56_RS10060	PWY-5741	ethylmalonyl-CoA pathway
AMS56_RS10060	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMS56_RS10090	PWY-6936	seleno-amino acid biosynthesis
AMS56_RS10135	PWY-723	alkylnitronates degradation
AMS56_RS10370	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AMS56_RS10455	PWY-6748	nitrate reduction VII (denitrification)
AMS56_RS10455	PWY-7084	nitrifier denitrification
AMS56_RS10775	PWY-5340	sulfate activation for sulfonation
AMS56_RS10825	PWY-5028	L-histidine degradation II
AMS56_RS10825	PWY-5030	L-histidine degradation III
AMS56_RS10850	PWY-5350	thiosulfate disproportionation III (rhodanese)
AMS56_RS10925	PWY-4983	L-citrulline-nitric oxide cycle
AMS56_RS10925	PWY-4984	urea cycle
AMS56_RS10925	PWY-5	canavanine biosynthesis
AMS56_RS10925	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS10925	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS10945	PWY-5443	aminopropanol phosphate biosynthesis I
AMS56_RS10950	PWY-4983	L-citrulline-nitric oxide cycle
AMS56_RS10950	PWY-4984	urea cycle
AMS56_RS10950	PWY-5	canavanine biosynthesis
AMS56_RS10950	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS10950	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS10955	PWY-4983	L-citrulline-nitric oxide cycle
AMS56_RS10955	PWY-4984	urea cycle
AMS56_RS10955	PWY-5	canavanine biosynthesis
AMS56_RS10955	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS10955	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS11075	PWY-4981	L-proline biosynthesis II (from arginine)
AMS56_RS11080	PWY-4981	L-proline biosynthesis II (from arginine)
AMS56_RS11080	PWY-4984	urea cycle
AMS56_RS11080	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS11140	PWY-5194	siroheme biosynthesis
AMS56_RS11140	PWY-5441	S-methyl-L-methionine cycle
AMS56_RS11140	PWY-702	L-methionine biosynthesis II
AMS56_RS11140	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMS56_RS11150	PWY-2201	folate transformations I
AMS56_RS11150	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMS56_RS11155	PWY-2201	folate transformations I
AMS56_RS11155	PWY-3841	folate transformations II
AMS56_RS11155	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMS56_RS11160	PWY-6683	sulfate reduction III (assimilatory)
AMS56_RS11170	PWY-5194	siroheme biosynthesis
AMS56_RS11170	PWY-5441	S-methyl-L-methionine cycle
AMS56_RS11170	PWY-702	L-methionine biosynthesis II
AMS56_RS11170	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMS56_RS11175	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMS56_RS11230	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMS56_RS11230	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMS56_RS11230	PWY-6268	adenosylcobalamin salvage from cobalamin
AMS56_RS11230	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMS56_RS11330	PWY-4261	glycerol degradation I
AMS56_RS11745	PWY-5686	UMP biosynthesis
AMS56_RS11770	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMS56_RS11770	PWY-5723	Rubisco shunt
AMS56_RS11985	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMS56_RS11985	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMS56_RS11990	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMS56_RS11995	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMS56_RS12265	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMS56_RS12295	PWY-7731	AMS56_RS12295
AMS56_RS12355	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMS56_RS12355	PWY-6153	autoinducer AI-2 biosynthesis I
AMS56_RS12355	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AMS56_RS12370	PWY-3801	sucrose degradation II (sucrose synthase)
AMS56_RS12370	PWY-6527	stachyose degradation
AMS56_RS12370	PWY-7238	sucrose biosynthesis II
AMS56_RS12370	PWY-7343	UDP-glucose biosynthesis
AMS56_RS12450	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AMS56_RS12530	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMS56_RS12565	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMS56_RS12565	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMS56_RS12565	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMS56_RS12565	PWY-6113	superpathway of mycolate biosynthesis
AMS56_RS12565	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMS56_RS12565	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMS56_RS12565	PWY-7663	gondoate biosynthesis (anaerobic)
AMS56_RS12565	PWY-7664	oleate biosynthesis IV (anaerobic)
AMS56_RS12565	PWYG-321	mycolate biosynthesis
AMS56_RS12840	PWY-6788	cellulose degradation II (fungi)
AMS56_RS12875	PWY-2622	trehalose biosynthesis IV
AMS56_RS12880	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMS56_RS12880	PWY-622	starch biosynthesis
AMS56_RS12890	PWY-2661	trehalose biosynthesis V
AMS56_RS12890	PWY-6902	chitin degradation II
AMS56_RS12895	PWY-5941	glycogen degradation II (eukaryotic)
AMS56_RS12895	PWY-6724	starch degradation II
AMS56_RS12895	PWY-6737	starch degradation V
AMS56_RS12895	PWY-7238	sucrose biosynthesis II
AMS56_RS12900	PWY-2661	trehalose biosynthesis V
AMS56_RS13025	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AMS56_RS13165	PWY-6749	CMP-legionaminate biosynthesis I
AMS56_RS13170	PWY-6614	tetrahydrofolate biosynthesis
AMS56_RS13200	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS13200	PWY-5686	UMP biosynthesis
AMS56_RS13200	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS13210	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS13210	PWY-5686	UMP biosynthesis
AMS56_RS13210	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS13245	PWY-5386	methylglyoxal degradation I
AMS56_RS13300	PWY-5796	malonate decarboxylase activation
AMS56_RS13305	PWY-5796	malonate decarboxylase activation
AMS56_RS13310	PWY-4381	fatty acid biosynthesis initiation I
AMS56_RS13310	PWY-5743	3-hydroxypropanoate cycle
AMS56_RS13310	PWY-5744	glyoxylate assimilation
AMS56_RS13310	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMS56_RS13310	PWY-6060	malonate degradation II (biotin-dependent)
AMS56_RS13310	PWY-6679	jadomycin biosynthesis
AMS56_RS13310	PWY-6722	candicidin biosynthesis
AMS56_RS13310	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMS56_RS13315	PWY-4381	fatty acid biosynthesis initiation I
AMS56_RS13315	PWY-5743	3-hydroxypropanoate cycle
AMS56_RS13315	PWY-5744	glyoxylate assimilation
AMS56_RS13315	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMS56_RS13315	PWY-6060	malonate degradation II (biotin-dependent)
AMS56_RS13315	PWY-6679	jadomycin biosynthesis
AMS56_RS13315	PWY-6722	candicidin biosynthesis
AMS56_RS13315	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMS56_RS13325	PWY-5794	malonate degradation I (biotin-independent)
AMS56_RS13325	PWY-6060	malonate degradation II (biotin-dependent)
AMS56_RS13345	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMS56_RS13345	PWY-5109	2-methylbutanoate biosynthesis
AMS56_RS13345	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMS56_RS13345	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMS56_RS13345	PWY-5177	glutaryl-CoA degradation
AMS56_RS13345	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMS56_RS13345	PWY-6435	4-hydroxybenzoate biosynthesis V
AMS56_RS13345	PWY-6583	pyruvate fermentation to butanol I
AMS56_RS13345	PWY-6863	pyruvate fermentation to hexanol
AMS56_RS13345	PWY-6883	pyruvate fermentation to butanol II
AMS56_RS13345	PWY-6944	androstenedione degradation
AMS56_RS13345	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMS56_RS13345	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMS56_RS13345	PWY-7007	methyl ketone biosynthesis
AMS56_RS13345	PWY-7046	4-coumarate degradation (anaerobic)
AMS56_RS13345	PWY-7094	fatty acid salvage
AMS56_RS13345	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMS56_RS13345	PWY-735	jasmonic acid biosynthesis
AMS56_RS13345	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMS56_RS13345	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMS56_RS13345	PWY-7726	AMS56_RS13345
AMS56_RS13350	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMS56_RS13395	PWY-6683	sulfate reduction III (assimilatory)
AMS56_RS13430	PWY-6749	CMP-legionaminate biosynthesis I
AMS56_RS13675	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AMS56_RS13765	PWY-5331	taurine biosynthesis
AMS56_RS13840	PWY-3781	aerobic respiration I (cytochrome c)
AMS56_RS13840	PWY-4521	arsenite oxidation I (respiratory)
AMS56_RS13840	PWY-6692	Fe(II) oxidation
AMS56_RS13840	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMS56_RS14050	PWY-3781	aerobic respiration I (cytochrome c)
AMS56_RS14050	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AMS56_RS14050	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMS56_RS14050	PWY-6692	Fe(II) oxidation
AMS56_RS14125	PWY-1042	glycolysis IV (plant cytosol)
AMS56_RS14125	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMS56_RS14125	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMS56_RS14125	PWY-7003	glycerol degradation to butanol
AMS56_RS14160	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMS56_RS14160	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMS56_RS14160	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMS56_RS14160	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMS56_RS14170	PWY-6871	3-methylbutanol biosynthesis
AMS56_RS14175	PWY-5669	phosphatidylethanolamine biosynthesis I
AMS56_RS14180	PWY-5669	phosphatidylethanolamine biosynthesis I
AMS56_RS14185	PWY-5103	L-isoleucine biosynthesis III
AMS56_RS14185	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMS56_RS14190	PWY-5101	L-isoleucine biosynthesis II
AMS56_RS14190	PWY-5103	L-isoleucine biosynthesis III
AMS56_RS14190	PWY-5104	L-isoleucine biosynthesis IV
AMS56_RS14190	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMS56_RS14190	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMS56_RS14190	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMS56_RS14190	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMS56_RS14195	PWY-5101	L-isoleucine biosynthesis II
AMS56_RS14195	PWY-5103	L-isoleucine biosynthesis III
AMS56_RS14195	PWY-5104	L-isoleucine biosynthesis IV
AMS56_RS14195	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMS56_RS14195	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMS56_RS14195	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMS56_RS14195	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMS56_RS14230	PWY-7039	phosphatidate metabolism, as a signaling molecule
AMS56_RS14260	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMS56_RS14355	PWY-7183	pyrimidine nucleobases salvage I
AMS56_RS14365	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMS56_RS14365	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMS56_RS14365	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMS56_RS14370	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AMS56_RS14370	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AMS56_RS14375	PWY-5381	pyridine nucleotide cycling (plants)
AMS56_RS14375	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMS56_RS14385	PWY-6825	phosphatidylcholine biosynthesis V
AMS56_RS14615	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMS56_RS14615	PWY-5723	Rubisco shunt
AMS56_RS14650	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AMS56_RS14650	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AMS56_RS14650	PWY-6148	tetrahydromethanopterin biosynthesis
AMS56_RS15000	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMS56_RS15000	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMS56_RS15005	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMS56_RS15005	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMS56_RS15015	PWY-1622	formaldehyde assimilation I (serine pathway)
AMS56_RS15015	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMS56_RS15015	PWY-5913	TCA cycle VI (obligate autotrophs)
AMS56_RS15015	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMS56_RS15015	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AMS56_RS15015	PWY-6549	L-glutamine biosynthesis III
AMS56_RS15015	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMS56_RS15015	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMS56_RS15015	PWY-7124	ethylene biosynthesis V (engineered)
AMS56_RS15050	PWY-4983	L-citrulline-nitric oxide cycle
AMS56_RS15050	PWY-4984	urea cycle
AMS56_RS15050	PWY-5	canavanine biosynthesis
AMS56_RS15050	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS15050	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS15070	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS15075	PWY-6854	ethylene biosynthesis III (microbes)
AMS56_RS15130	PWY-5155	&beta;-alanine biosynthesis III
AMS56_RS15150	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMS56_RS15150	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMS56_RS15150	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMS56_RS15160	PWY-5443	aminopropanol phosphate biosynthesis I
AMS56_RS15175	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMS56_RS15175	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMS56_RS15175	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMS56_RS15180	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMS56_RS15180	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMS56_RS15180	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMS56_RS15185	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMS56_RS15185	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMS56_RS15185	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMS56_RS15210	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AMS56_RS15210	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AMS56_RS15235	PWY-5101	L-isoleucine biosynthesis II
AMS56_RS15235	PWY-5103	L-isoleucine biosynthesis III
AMS56_RS15235	PWY-5104	L-isoleucine biosynthesis IV
AMS56_RS15235	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMS56_RS15270	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMS56_RS15275	PWY-5194	siroheme biosynthesis
AMS56_RS15275	PWY-5441	S-methyl-L-methionine cycle
AMS56_RS15275	PWY-702	L-methionine biosynthesis II
AMS56_RS15275	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMS56_RS15280	PWY-5278	sulfite oxidation III
AMS56_RS15280	PWY-5340	sulfate activation for sulfonation
AMS56_RS15280	PWY-6683	sulfate reduction III (assimilatory)
AMS56_RS15280	PWY-6932	selenate reduction
AMS56_RS15285	PWY-5278	sulfite oxidation III
AMS56_RS15285	PWY-5340	sulfate activation for sulfonation
AMS56_RS15285	PWY-6683	sulfate reduction III (assimilatory)
AMS56_RS15285	PWY-6932	selenate reduction
AMS56_RS15300	PWY-6683	sulfate reduction III (assimilatory)
AMS56_RS15450	PWY-5316	nicotine biosynthesis
AMS56_RS15450	PWY-7342	superpathway of nicotine biosynthesis
AMS56_RS15455	PWY-5316	nicotine biosynthesis
AMS56_RS15455	PWY-5381	pyridine nucleotide cycling (plants)
AMS56_RS15455	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AMS56_RS15455	PWY-7342	superpathway of nicotine biosynthesis
AMS56_RS15460	PWY-5316	nicotine biosynthesis
AMS56_RS15460	PWY-7342	superpathway of nicotine biosynthesis
AMS56_RS15475	PWY-6825	phosphatidylcholine biosynthesis V
AMS56_RS15480	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMS56_RS15480	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMS56_RS15485	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AMS56_RS15485	PWY-6167	flavin biosynthesis II (archaea)
AMS56_RS15485	PWY-6168	flavin biosynthesis III (fungi)
AMS56_RS15505	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMS56_RS15505	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMS56_RS15505	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS15505	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMS56_RS15545	PWY-5913	TCA cycle VI (obligate autotrophs)
AMS56_RS15545	PWY-6549	L-glutamine biosynthesis III
AMS56_RS15545	PWY-6728	methylaspartate cycle
AMS56_RS15545	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMS56_RS15545	PWY-7124	ethylene biosynthesis V (engineered)
AMS56_RS15545	PWY-7254	TCA cycle VII (acetate-producers)
AMS56_RS15545	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMS56_RS15620	PWY-6654	phosphopantothenate biosynthesis III
AMS56_RS15650	PWY-6854	ethylene biosynthesis III (microbes)
AMS56_RS15670	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMS56_RS15675	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS15705	PWY-4981	L-proline biosynthesis II (from arginine)
AMS56_RS15705	PWY-4984	urea cycle
AMS56_RS15705	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS15710	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMS56_RS15710	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMS56_RS15745	PWY-6700	queuosine biosynthesis
AMS56_RS15780	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMS56_RS15780	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMS56_RS15820	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AMS56_RS15820	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AMS56_RS15820	PWY-7717	AMS56_RS15820
AMS56_RS15820	PWY-7733	AMS56_RS15820
AMS56_RS15820	PWY-7734	AMS56_RS15820
AMS56_RS15825	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AMS56_RS15825	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AMS56_RS15850	PWY-6654	phosphopantothenate biosynthesis III
AMS56_RS15870	PWY-6531	mannitol cycle
AMS56_RS15875	PWY-4261	glycerol degradation I
AMS56_RS15965	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMS56_RS15970	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMS56_RS15970	PWY-3162	L-tryptophan degradation V (side chain pathway)
AMS56_RS15970	PWY-5057	L-valine degradation II
AMS56_RS15970	PWY-5076	L-leucine degradation III
AMS56_RS15970	PWY-5078	L-isoleucine degradation II
AMS56_RS15970	PWY-5079	L-phenylalanine degradation III
AMS56_RS15970	PWY-5082	L-methionine degradation III
AMS56_RS15970	PWY-5480	pyruvate fermentation to ethanol I
AMS56_RS15970	PWY-5486	pyruvate fermentation to ethanol II
AMS56_RS15970	PWY-5751	phenylethanol biosynthesis
AMS56_RS15970	PWY-6313	serotonin degradation
AMS56_RS15970	PWY-6333	acetaldehyde biosynthesis I
AMS56_RS15970	PWY-6342	noradrenaline and adrenaline degradation
AMS56_RS15970	PWY-6454	vancomycin resistance I
AMS56_RS15970	PWY-6587	pyruvate fermentation to ethanol III
AMS56_RS15970	PWY-6802	salidroside biosynthesis
AMS56_RS15970	PWY-6871	3-methylbutanol biosynthesis
AMS56_RS15970	PWY-6901	superpathway of glucose and xylose degradation
AMS56_RS15970	PWY-7013	L-1,2-propanediol degradation
AMS56_RS15970	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMS56_RS15970	PWY-7118	chitin degradation to ethanol
AMS56_RS15970	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMS56_RS15980	PWY-4261	glycerol degradation I
AMS56_RS16045	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMS56_RS16045	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMS56_RS16070	PWY-6123	inosine-5'-phosphate biosynthesis I
AMS56_RS16070	PWY-7234	inosine-5'-phosphate biosynthesis III
AMS56_RS16075	PWY-6123	inosine-5'-phosphate biosynthesis I
AMS56_RS16075	PWY-6124	inosine-5'-phosphate biosynthesis II
AMS56_RS16075	PWY-7234	inosine-5'-phosphate biosynthesis III
AMS56_RS16080	PWY-1042	glycolysis IV (plant cytosol)
AMS56_RS16080	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMS56_RS16080	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMS56_RS16080	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMS56_RS16080	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMS56_RS16085	PWY-1042	glycolysis IV (plant cytosol)
AMS56_RS16085	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMS56_RS16085	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMS56_RS16085	PWY-5723	Rubisco shunt
AMS56_RS16085	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMS56_RS16085	PWY-6886	1-butanol autotrophic biosynthesis
AMS56_RS16085	PWY-6901	superpathway of glucose and xylose degradation
AMS56_RS16085	PWY-7003	glycerol degradation to butanol
AMS56_RS16085	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMS56_RS16085	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMS56_RS16090	PWY-1042	glycolysis IV (plant cytosol)
AMS56_RS16090	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMS56_RS16090	PWY-6886	1-butanol autotrophic biosynthesis
AMS56_RS16090	PWY-6901	superpathway of glucose and xylose degradation
AMS56_RS16090	PWY-7003	glycerol degradation to butanol
AMS56_RS16105	PWY-5057	L-valine degradation II
AMS56_RS16105	PWY-5076	L-leucine degradation III
AMS56_RS16105	PWY-5078	L-isoleucine degradation II
AMS56_RS16105	PWY-5101	L-isoleucine biosynthesis II
AMS56_RS16105	PWY-5103	L-isoleucine biosynthesis III
AMS56_RS16105	PWY-5104	L-isoleucine biosynthesis IV
AMS56_RS16105	PWY-5108	L-isoleucine biosynthesis V
AMS56_RS16170	PWY-5392	reductive TCA cycle II
AMS56_RS16170	PWY-5537	pyruvate fermentation to acetate V
AMS56_RS16170	PWY-5538	pyruvate fermentation to acetate VI
AMS56_RS16170	PWY-5690	TCA cycle II (plants and fungi)
AMS56_RS16170	PWY-5913	TCA cycle VI (obligate autotrophs)
AMS56_RS16170	PWY-6728	methylaspartate cycle
AMS56_RS16170	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMS56_RS16170	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMS56_RS16175	PWY-5392	reductive TCA cycle II
AMS56_RS16175	PWY-5537	pyruvate fermentation to acetate V
AMS56_RS16175	PWY-5538	pyruvate fermentation to acetate VI
AMS56_RS16175	PWY-5690	TCA cycle II (plants and fungi)
AMS56_RS16175	PWY-5913	TCA cycle VI (obligate autotrophs)
AMS56_RS16175	PWY-6728	methylaspartate cycle
AMS56_RS16175	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AMS56_RS16175	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AMS56_RS16320	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
AMS56_RS16330	PWY-1042	glycolysis IV (plant cytosol)
AMS56_RS16330	PWY-1622	formaldehyde assimilation I (serine pathway)
AMS56_RS16330	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMS56_RS16330	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMS56_RS16330	PWY-5723	Rubisco shunt
AMS56_RS16330	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMS56_RS16330	PWY-6886	1-butanol autotrophic biosynthesis
AMS56_RS16330	PWY-6901	superpathway of glucose and xylose degradation
AMS56_RS16330	PWY-7003	glycerol degradation to butanol
AMS56_RS16330	PWY-7124	ethylene biosynthesis V (engineered)
AMS56_RS16330	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMS56_RS16345	PWY-3781	aerobic respiration I (cytochrome c)
AMS56_RS16345	PWY-4521	arsenite oxidation I (respiratory)
AMS56_RS16345	PWY-6692	Fe(II) oxidation
AMS56_RS16345	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMS56_RS16370	PWY-5381	pyridine nucleotide cycling (plants)
AMS56_RS16475	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AMS56_RS16485	PWY-1042	glycolysis IV (plant cytosol)
AMS56_RS16485	PWY-1622	formaldehyde assimilation I (serine pathway)
AMS56_RS16485	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMS56_RS16485	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMS56_RS16485	PWY-5723	Rubisco shunt
AMS56_RS16485	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMS56_RS16485	PWY-6886	1-butanol autotrophic biosynthesis
AMS56_RS16485	PWY-6901	superpathway of glucose and xylose degradation
AMS56_RS16485	PWY-7003	glycerol degradation to butanol
AMS56_RS16485	PWY-7124	ethylene biosynthesis V (engineered)
AMS56_RS16485	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMS56_RS16520	PWY-4041	&gamma;-glutamyl cycle
AMS56_RS16520	PWY-5826	hypoglycin biosynthesis
AMS56_RS16540	PWY-4261	glycerol degradation I
AMS56_RS16540	PWY-6118	glycerol-3-phosphate shuttle
AMS56_RS16540	PWY-6952	glycerophosphodiester degradation
AMS56_RS16545	PWY-4261	glycerol degradation I
AMS56_RS16560	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMS56_RS16565	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMS56_RS16590	PWY-6167	flavin biosynthesis II (archaea)
AMS56_RS16590	PWY-6168	flavin biosynthesis III (fungi)
AMS56_RS16665	PWY-5386	methylglyoxal degradation I
AMS56_RS16680	PWY-7294	xylose degradation IV
AMS56_RS16680	PWY-7295	L-arabinose degradation IV
AMS56_RS16740	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMS56_RS16740	PWY-5109	2-methylbutanoate biosynthesis
AMS56_RS16740	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMS56_RS16740	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMS56_RS16740	PWY-5177	glutaryl-CoA degradation
AMS56_RS16740	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMS56_RS16740	PWY-6435	4-hydroxybenzoate biosynthesis V
AMS56_RS16740	PWY-6583	pyruvate fermentation to butanol I
AMS56_RS16740	PWY-6863	pyruvate fermentation to hexanol
AMS56_RS16740	PWY-6883	pyruvate fermentation to butanol II
AMS56_RS16740	PWY-6944	androstenedione degradation
AMS56_RS16740	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMS56_RS16740	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMS56_RS16740	PWY-7007	methyl ketone biosynthesis
AMS56_RS16740	PWY-7046	4-coumarate degradation (anaerobic)
AMS56_RS16740	PWY-7094	fatty acid salvage
AMS56_RS16740	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMS56_RS16740	PWY-735	jasmonic acid biosynthesis
AMS56_RS16740	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMS56_RS16740	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMS56_RS16740	PWY-7726	AMS56_RS16740
AMS56_RS16760	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AMS56_RS16800	PWY-5839	menaquinol-7 biosynthesis
AMS56_RS16800	PWY-5844	menaquinol-9 biosynthesis
AMS56_RS16800	PWY-5849	menaquinol-6 biosynthesis
AMS56_RS16800	PWY-5890	menaquinol-10 biosynthesis
AMS56_RS16800	PWY-5891	menaquinol-11 biosynthesis
AMS56_RS16800	PWY-5892	menaquinol-12 biosynthesis
AMS56_RS16800	PWY-5895	menaquinol-13 biosynthesis
AMS56_RS16830	PWY-6700	queuosine biosynthesis
AMS56_RS16850	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMS56_RS16900	PWY-6655	xanthan biosynthesis
AMS56_RS16900	PWY-6658	acetan biosynthesis
AMS56_RS16965	PWY-5659	GDP-mannose biosynthesis
AMS56_RS16965	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AMS56_RS16995	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
AMS56_RS16995	PWY-581	indole-3-acetate biosynthesis II
AMS56_RS16995	PWY-7308	acrylonitrile degradation I
AMS56_RS17000	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
AMS56_RS17000	PWY-581	indole-3-acetate biosynthesis II
AMS56_RS17000	PWY-7308	acrylonitrile degradation I
AMS56_RS17165	PWY-2201	folate transformations I
AMS56_RS17165	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS17180	PWY-6605	adenine and adenosine salvage II
AMS56_RS17180	PWY-6610	adenine and adenosine salvage IV
AMS56_RS17195	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMS56_RS17195	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMS56_RS17265	PWY-7560	methylerythritol phosphate pathway II
AMS56_RS17285	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AMS56_RS17305	PWY-6825	phosphatidylcholine biosynthesis V
AMS56_RS17325	PWY-6683	sulfate reduction III (assimilatory)
AMS56_RS17350	PWY-6871	3-methylbutanol biosynthesis
AMS56_RS17385	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AMS56_RS17395	PWY-6902	chitin degradation II
AMS56_RS17415	PWY-6906	chitin derivatives degradation
AMS56_RS17415	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AMS56_RS17415	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AMS56_RS17460	PWY-4381	fatty acid biosynthesis initiation I
AMS56_RS17515	PWY-6409	pyoverdine I biosynthesis
AMS56_RS17515	PWY-6562	norspermidine biosynthesis
AMS56_RS17515	PWY-761	rhizobactin 1021 biosynthesis
AMS56_RS17630	PWY-3781	aerobic respiration I (cytochrome c)
AMS56_RS17630	PWY-4521	arsenite oxidation I (respiratory)
AMS56_RS17630	PWY-6692	Fe(II) oxidation
AMS56_RS17630	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AMS56_RS17645	PWY-2201	folate transformations I
AMS56_RS17645	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMS56_RS17655	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMS56_RS17665	PWY-5667	CDP-diacylglycerol biosynthesis I
AMS56_RS17665	PWY-5981	CDP-diacylglycerol biosynthesis III
AMS56_RS17685	PWY-1622	formaldehyde assimilation I (serine pathway)
AMS56_RS17685	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMS56_RS17810	PWY-1361	benzoyl-CoA degradation I (aerobic)
AMS56_RS17810	PWY-5109	2-methylbutanoate biosynthesis
AMS56_RS17810	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AMS56_RS17810	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AMS56_RS17810	PWY-5177	glutaryl-CoA degradation
AMS56_RS17810	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMS56_RS17810	PWY-6435	4-hydroxybenzoate biosynthesis V
AMS56_RS17810	PWY-6583	pyruvate fermentation to butanol I
AMS56_RS17810	PWY-6863	pyruvate fermentation to hexanol
AMS56_RS17810	PWY-6883	pyruvate fermentation to butanol II
AMS56_RS17810	PWY-6944	androstenedione degradation
AMS56_RS17810	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AMS56_RS17810	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AMS56_RS17810	PWY-7007	methyl ketone biosynthesis
AMS56_RS17810	PWY-7046	4-coumarate degradation (anaerobic)
AMS56_RS17810	PWY-7094	fatty acid salvage
AMS56_RS17810	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AMS56_RS17810	PWY-735	jasmonic acid biosynthesis
AMS56_RS17810	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AMS56_RS17810	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AMS56_RS17810	PWY-7726	AMS56_RS17810
AMS56_RS17825	PWY-4041	&gamma;-glutamyl cycle
AMS56_RS17825	PWY-5826	hypoglycin biosynthesis
AMS56_RS17840	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AMS56_RS17840	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AMS56_RS17845	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AMS56_RS17845	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AMS56_RS17870	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMS56_RS17870	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMS56_RS17925	PWY-3961	phosphopantothenate biosynthesis II
AMS56_RS17985	PWY-2201	folate transformations I
AMS56_RS17985	PWY-3841	folate transformations II
AMS56_RS18860	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMS56_RS19805	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS19810	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMS56_RS21450	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMS56_RS21570	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMS56_RS21570	PWY-5723	Rubisco shunt
AMS56_RS21970	PWY-7130	L-glucose degradation
AMS56_RS22545	PWY-7399	methylphosphonate degradation II
AMS56_RS22580	PWY-3341	L-proline biosynthesis III
AMS56_RS22580	PWY-4981	L-proline biosynthesis II (from arginine)
AMS56_RS22580	PWY-6344	L-ornithine degradation II (Stickland reaction)
AMS56_RS24350	PWY-3841	folate transformations II
AMS56_RS24350	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMS56_RS24350	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMS56_RS24350	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMS56_RS24350	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMS56_RS24350	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMS56_RS25360	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AMS56_RS25360	PWY-2201	folate transformations I
AMS56_RS25360	PWY-3841	folate transformations II
AMS56_RS25360	PWY-5030	L-histidine degradation III
AMS56_RS25360	PWY-5497	purine nucleobases degradation II (anaerobic)
AMS56_RS25360	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMS56_RS26040	PWY-7294	xylose degradation IV
AMS56_RS26040	PWY-7295	L-arabinose degradation IV
AMS56_RS26040	PWY-7560	methylerythritol phosphate pathway II
AMS56_RS26455	PWY-6654	phosphopantothenate biosynthesis III
AMS56_RS27185	PWY-723	alkylnitronates degradation
AMS56_RS28265	PWY-4261	glycerol degradation I
AMS56_RS29930	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS29930	PWY-5686	UMP biosynthesis
AMS56_RS29930	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS29955	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMS56_RS29955	PWY-5686	UMP biosynthesis
AMS56_RS29955	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMS56_RS30070	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMS56_RS30140	PWY-6749	CMP-legionaminate biosynthesis I
