AMS56_RS00005 SM00836 DALR anticodon binding domain AMS56_RS00005 SM01016 Arginyl tRNA synthetase N terminal dom AMS56_RS00030 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS56_RS00045 SM00382 ATPases associated with a variety of cellular activities AMS56_RS00050 SM00849 Metallo-beta-lactamase superfamily AMS56_RS00060 SM00947 Carbonic anhydrase AMS56_RS00100 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS56_RS00100 SM00876 Biotin and Thiamin Synthesis associated domain AMS56_RS00115 SM00098 Alkaline phosphatase homologues AMS56_RS00120 SM00098 Alkaline phosphatase homologues AMS56_RS00130 SM00052 Putative diguanylate phosphodiesterase AMS56_RS00195 SM01130 AMS56_RS00195 AMS56_RS00205 SM00612 AMS56_RS00205 AMS56_RS00230 SM00344 helix_turn_helix ASNC type AMS56_RS00285 SM00344 helix_turn_helix ASNC type AMS56_RS00320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS56_RS00325 SM00354 helix_turn _helix lactose operon repressor AMS56_RS00360 SM00905 Dihydroneopterin aldolase AMS56_RS00435 SM00746 metallochaperone-like domain AMS56_RS00575 SM00047 Lysozyme subfamily 2 AMS56_RS00620 SM00858 AMS56_RS00620 AMS56_RS00670 SM00796 Allophanate hydrolase subunit 1 AMS56_RS00675 SM00797 Allophanate hydrolase subunit 2 AMS56_RS00705 SM00382 ATPases associated with a variety of cellular activities AMS56_RS00710 SM00382 ATPases associated with a variety of cellular activities AMS56_RS00745 SM00382 ATPases associated with a variety of cellular activities AMS56_RS00775 SM00387 Histidine kinase-like ATPases AMS56_RS00780 SM00421 helix_turn_helix, Lux Regulon AMS56_RS00780 SM00448 cheY-homologous receiver domain AMS56_RS00840 SM00382 ATPases associated with a variety of cellular activities AMS56_RS00945 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMS56_RS00950 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMS56_RS00965 SM00382 ATPases associated with a variety of cellular activities AMS56_RS00965 SM01086 C-terminal, D2-small domain, of ClpB protein AMS56_RS00970 SM00448 cheY-homologous receiver domain AMS56_RS00975 SM00387 Histidine kinase-like ATPases AMS56_RS00975 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS01020 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS01025 SM00829 Enoylreductase AMS56_RS01040 SM00845 GatB domain AMS56_RS01080 SM00671 Sel1-like repeats. AMS56_RS01285 SM00530 Helix-turn-helix XRE-family like proteins AMS56_RS01305 SM01040 BRO family, N-terminal domain AMS56_RS01355 SM00448 cheY-homologous receiver domain AMS56_RS01360 SM00091 PAS domain AMS56_RS01360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS56_RS01360 SM00387 Histidine kinase-like ATPases AMS56_RS01360 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS01410 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AMS56_RS01410 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AMS56_RS01410 SM00493 AMS56_RS01410 AMS56_RS01505 SM00478 endonuclease III AMS56_RS01505 SM01009 AlkA N-terminal domain AMS56_RS01510 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS01520 SM01322 AMS56_RS01520 AMS56_RS01560 SM00857 Resolvase, N terminal domain AMS56_RS01635 SM01234 AMS56_RS01635 AMS56_RS01650 SM00382 ATPases associated with a variety of cellular activities AMS56_RS01650 SM00760 Bacterial dnaA protein helix-turn-helix domain AMS56_RS01655 SM00480 DNA polymerase III beta subunit AMS56_RS01660 SM00387 Histidine kinase-like ATPases AMS56_RS01660 SM00433 TopoisomeraseII AMS56_RS01685 SM01060 AMS56_RS01685 AMS56_RS01745 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS01810 SM00382 ATPases associated with a variety of cellular activities AMS56_RS01820 SM00382 ATPases associated with a variety of cellular activities AMS56_RS01825 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS01855 SM00448 cheY-homologous receiver domain AMS56_RS01855 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS01860 SM00387 Histidine kinase-like ATPases AMS56_RS01860 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS01870 SM00382 ATPases associated with a variety of cellular activities AMS56_RS01890 SM00422 helix_turn_helix, mercury resistance AMS56_RS01950 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS56_RS02015 SM00382 ATPases associated with a variety of cellular activities AMS56_RS02030 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMS56_RS02035 SM00411 bacterial (prokaryotic) histone like domain AMS56_RS02055 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS56_RS02075 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain AMS56_RS02080 SM00387 Histidine kinase-like ATPases AMS56_RS02080 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS02085 SM00448 cheY-homologous receiver domain AMS56_RS02085 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS02105 SM00344 helix_turn_helix ASNC type AMS56_RS02110 SM01118 AMS56_RS02110 AMS56_RS02130 SM00382 ATPases associated with a variety of cellular activities AMS56_RS02135 SM00382 ATPases associated with a variety of cellular activities AMS56_RS02170 SM00382 ATPases associated with a variety of cellular activities AMS56_RS02175 SM00382 ATPases associated with a variety of cellular activities AMS56_RS02180 SM01228 AMS56_RS02180 AMS56_RS02195 SM00470 ParB-like nuclease domain AMS56_RS02240 SM00382 ATPases associated with a variety of cellular activities AMS56_RS02260 SM00062 Bacterial periplasmic substrate-binding proteins AMS56_RS02270 SM00487 DEAD-like helicases superfamily AMS56_RS02270 SM00490 helicase superfamily c-terminal domain AMS56_RS02310 SM00062 Bacterial periplasmic substrate-binding proteins AMS56_RS02330 SM00422 helix_turn_helix, mercury resistance AMS56_RS02395 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS02560 SM00530 Helix-turn-helix XRE-family like proteins AMS56_RS02600 SM00990 AMS56_RS02600 AMS56_RS02680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS56_RS02680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS56_RS02745 SM00822 AMS56_RS02745 AMS56_RS02770 SM00028 Tetratricopeptide repeats AMS56_RS02815 SM00528 Domain in histone-like proteins of HNS family AMS56_RS02845 SM00448 cheY-homologous receiver domain AMS56_RS02850 SM00073 Histidine Phosphotransfer domain AMS56_RS02850 SM00260 Two component signalling adaptor domain AMS56_RS02850 SM00387 Histidine kinase-like ATPases AMS56_RS02850 SM01231 AMS56_RS02850 AMS56_RS02855 SM00260 Two component signalling adaptor domain AMS56_RS02860 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS56_RS02860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS56_RS02865 SM00138 Methyltransferase, chemotaxis proteins AMS56_RS02875 SM00448 cheY-homologous receiver domain AMS56_RS02880 SM00448 cheY-homologous receiver domain AMS56_RS02915 SM00382 ATPases associated with a variety of cellular activities AMS56_RS02915 SM00962 SRP54-type protein, GTPase domain AMS56_RS02930 SM00996 S-adenosyl-L-homocysteine hydrolase AMS56_RS02930 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AMS56_RS02975 SM00528 Domain in histone-like proteins of HNS family AMS56_RS02985 SM00344 helix_turn_helix ASNC type AMS56_RS02995 SM00849 Metallo-beta-lactamase superfamily AMS56_RS03020 SM00749 bacterial OsmY and nodulation domain AMS56_RS03105 SM00859 Semialdehyde dehydrogenase, NAD binding domain AMS56_RS03125 SM00919 Malic enzyme, NAD binding domain AMS56_RS03125 SM01274 AMS56_RS03125 AMS56_RS03145 SM00344 helix_turn_helix ASNC type AMS56_RS03250 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AMS56_RS03250 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AMS56_RS03255 SM00649 Ribosomal protein L11/L12 AMS56_RS03280 SM00663 RNA polymerase I subunit A N-terminus AMS56_RS03285 SM00341 Helicase and RNase D C-terminal AMS56_RS03285 SM00487 DEAD-like helicases superfamily AMS56_RS03285 SM00490 helicase superfamily c-terminal domain AMS56_RS03285 SM00956 AMS56_RS03285 AMS56_RS03300 SM00838 Elongation factor G C-terminus AMS56_RS03300 SM00889 Elongation factor G, domain IV AMS56_RS03310 SM01403 AMS56_RS03310 AMS56_RS03330 SM01382 AMS56_RS03330 AMS56_RS03330 SM01383 AMS56_RS03330 AMS56_RS03345 SM00322 K homology RNA-binding domain AMS56_RS03365 SM01374 AMS56_RS03365 AMS56_RS03420 SM00316 Ribosomal protein S1-like RNA-binding domain AMS56_RS03440 SM00363 S4 RNA-binding domain AMS56_RS03440 SM01390 AMS56_RS03440 AMS56_RS03445 SM00662 RNA polymerases D AMS56_RS03465 SM01004 Delta-aminolevulinic acid dehydratase AMS56_RS03510 SM01219 AMS56_RS03510 AMS56_RS03535 SM00965 Secretin and TonB N terminus short domain AMS56_RS03550 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS56_RS03570 SM00382 ATPases associated with a variety of cellular activities AMS56_RS03585 SM01321 AMS56_RS03585 AMS56_RS03610 SM00382 ATPases associated with a variety of cellular activities AMS56_RS03635 SM00382 ATPases associated with a variety of cellular activities AMS56_RS03665 SM00382 ATPases associated with a variety of cellular activities AMS56_RS03760 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMS56_RS03825 SM00487 DEAD-like helicases superfamily AMS56_RS03835 SM00530 Helix-turn-helix XRE-family like proteins AMS56_RS03915 SM00382 ATPases associated with a variety of cellular activities AMS56_RS03915 SM01086 C-terminal, D2-small domain, of ClpB protein AMS56_RS03960 SM00382 ATPases associated with a variety of cellular activities AMS56_RS03985 SM00769 Water Stress and Hypersensitive response AMS56_RS04045 SM00357 Cold shock protein domain AMS56_RS04075 SM00937 AMS56_RS04075 AMS56_RS04115 SM00382 ATPases associated with a variety of cellular activities AMS56_RS04145 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS04180 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMS56_RS04190 SM00986 Uracil DNA glycosylase superfamily AMS56_RS04190 SM00987 UreE urease accessory protein, C-terminal domain AMS56_RS04195 SM01118 AMS56_RS04195 AMS56_RS04235 SM00925 MltA specific insert domain AMS56_RS04295 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMS56_RS04380 SM00842 Cell division protein FtsA AMS56_RS04385 SM00864 Tubulin/FtsZ family, GTPase domain AMS56_RS04385 SM00865 Tubulin/FtsZ family, C-terminal domain AMS56_RS04405 SM00957 SecA DEAD-like domain AMS56_RS04405 SM00958 SecA preprotein cross-linking domain AMS56_RS04415 SM00382 ATPases associated with a variety of cellular activities AMS56_RS04450 SM00382 ATPases associated with a variety of cellular activities AMS56_RS04455 SM01091 Transporter associated domain AMS56_RS04485 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AMS56_RS04515 SM00382 ATPases associated with a variety of cellular activities AMS56_RS04515 SM00962 SRP54-type protein, GTPase domain AMS56_RS04515 SM00963 SRP54-type protein, helical bundle domain AMS56_RS04530 SM00644 AMS56_RS04530 AMS56_RS04575 SM00878 Biotin carboxylase C-terminal domain AMS56_RS04610 SM00955 AMS56_RS04610 AMS56_RS04635 SM00346 helix_turn_helix isocitrate lyase regulation AMS56_RS04650 SM00822 AMS56_RS04650 AMS56_RS04660 SM00382 ATPases associated with a variety of cellular activities AMS56_RS04670 SM00822 AMS56_RS04670 AMS56_RS04680 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AMS56_RS04700 SM00919 Malic enzyme, NAD binding domain AMS56_RS04700 SM01274 AMS56_RS04700 AMS56_RS04735 SM00861 Transketolase, pyrimidine binding domain AMS56_RS04740 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AMS56_RS04750 SM01116 AMS56_RS04750 AMS56_RS04755 SM00947 Carbonic anhydrase AMS56_RS04765 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS04765 SM00895 AMS56_RS04765 AMS56_RS04875 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AMS56_RS04880 SM00062 Bacterial periplasmic substrate-binding proteins AMS56_RS04895 SM00382 ATPases associated with a variety of cellular activities AMS56_RS04905 SM00883 Chaperonin 10 Kd subunit AMS56_RS04960 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS04980 SM00363 S4 RNA-binding domain AMS56_RS04990 SM00855 Phosphoglycerate mutase family AMS56_RS05005 SM00382 ATPases associated with a variety of cellular activities AMS56_RS05010 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMS56_RS05025 SM00798 AICARFT/IMPCHase bienzyme AMS56_RS05025 SM00851 MGS-like domain AMS56_RS05045 SM01011 Aminopeptidase P, N-terminal domain AMS56_RS05075 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AMS56_RS05075 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AMS56_RS05115 SM00981 AMS56_RS05115 AMS56_RS05150 SM00867 YceI-like domain AMS56_RS05155 SM00867 YceI-like domain AMS56_RS05175 SM01323 AMS56_RS05175 AMS56_RS05190 SM00487 DEAD-like helicases superfamily AMS56_RS05190 SM00490 helicase superfamily c-terminal domain AMS56_RS05225 SM00072 Guanylate kinase homologues. AMS56_RS05235 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS05235 SM00866 AMS56_RS05235 AMS56_RS05260 SM00382 ATPases associated with a variety of cellular activities AMS56_RS05265 SM00382 ATPases associated with a variety of cellular activities AMS56_RS05275 SM00382 ATPases associated with a variety of cellular activities AMS56_RS05355 SM00382 ATPases associated with a variety of cellular activities AMS56_RS05375 SM00363 S4 RNA-binding domain AMS56_RS05395 SM00271 DnaJ molecular chaperone homology domain AMS56_RS05450 SM00853 MutL C terminal dimerisation domain AMS56_RS05450 SM01340 AMS56_RS05450 AMS56_RS05505 SM00382 ATPases associated with a variety of cellular activities AMS56_RS05580 SM00822 AMS56_RS05580 AMS56_RS05580 SM00823 Phosphopantetheine attachment site AMS56_RS05580 SM00825 Beta-ketoacyl synthase AMS56_RS05580 SM00826 AMS56_RS05580 AMS56_RS05580 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMS56_RS05580 SM00829 Enoylreductase AMS56_RS05580 SM01294 AMS56_RS05580 AMS56_RS05615 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS05630 SM00226 Low molecular weight phosphatase family AMS56_RS05805 SM00346 helix_turn_helix isocitrate lyase regulation AMS56_RS05820 SM00849 Metallo-beta-lactamase superfamily AMS56_RS05885 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS05900 SM01092 CO dehydrogenase flavoprotein C-terminal domain AMS56_RS05905 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AMS56_RS05925 SM00382 ATPases associated with a variety of cellular activities AMS56_RS05995 SM00530 Helix-turn-helix XRE-family like proteins AMS56_RS06000 SM00849 Metallo-beta-lactamase superfamily AMS56_RS06035 SM00829 Enoylreductase AMS56_RS06050 SM00883 Chaperonin 10 Kd subunit AMS56_RS06080 SM00732 Likely ribonuclease with RNase H fold. AMS56_RS06100 SM00563 Phosphate acyltransferases AMS56_RS06135 SM00382 ATPases associated with a variety of cellular activities AMS56_RS06240 SM00988 UreE urease accessory protein, N-terminal domain AMS56_RS06265 SM00382 ATPases associated with a variety of cellular activities AMS56_RS06295 SM00450 Rhodanese Homology Domain AMS56_RS06300 SM00650 Ribosomal RNA adenine dimethylases AMS56_RS06310 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS56_RS06460 SM00382 ATPases associated with a variety of cellular activities AMS56_RS06470 SM00062 Bacterial periplasmic substrate-binding proteins AMS56_RS06505 SM00382 ATPases associated with a variety of cellular activities AMS56_RS06515 SM00463 Small MutS-related domain AMS56_RS06525 SM00843 AMS56_RS06525 AMS56_RS06535 SM00382 ATPases associated with a variety of cellular activities AMS56_RS06630 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS56_RS06650 SM00072 Guanylate kinase homologues. AMS56_RS06655 SM01409 AMS56_RS06655 AMS56_RS06660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS56_RS06660 SM00954 Region found in RelA / SpoT proteins AMS56_RS06690 SM00357 Cold shock protein domain AMS56_RS06695 SM00479 AMS56_RS06695 AMS56_RS06700 SM00830 Chorismate mutase type II AMS56_RS06830 SM00028 Tetratricopeptide repeats AMS56_RS06845 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMS56_RS06845 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMS56_RS06850 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMS56_RS06890 SM00434 DNA Topoisomerase IV AMS56_RS06905 SM00830 Chorismate mutase type II AMS56_RS06920 SM00316 Ribosomal protein S1-like RNA-binding domain AMS56_RS06925 SM00411 bacterial (prokaryotic) histone like domain AMS56_RS06935 SM00028 Tetratricopeptide repeats AMS56_RS06940 SM00984 UDP binding domain AMS56_RS06955 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMS56_RS06985 SM00382 ATPases associated with a variety of cellular activities AMS56_RS06985 SM00930 AMS56_RS06985 AMS56_RS07000 SM00893 Electron transfer flavoprotein domain AMS56_RS07005 SM00893 Electron transfer flavoprotein domain AMS56_RS07020 SM00344 helix_turn_helix ASNC type AMS56_RS07025 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS56_RS07090 SM00479 AMS56_RS07090 AMS56_RS07095 SM00852 Probable molybdopterin binding domain AMS56_RS07115 SM00382 ATPases associated with a variety of cellular activities AMS56_RS07145 SM00382 ATPases associated with a variety of cellular activities AMS56_RS07160 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AMS56_RS07265 SM00852 Probable molybdopterin binding domain AMS56_RS07275 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS56_RS07280 SM00316 Ribosomal protein S1-like RNA-binding domain AMS56_RS07285 SM00363 S4 RNA-binding domain AMS56_RS07335 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMS56_RS07340 SM00822 AMS56_RS07340 AMS56_RS07350 SM00825 Beta-ketoacyl synthase AMS56_RS07375 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMS56_RS07385 SM00838 Elongation factor G C-terminus AMS56_RS07395 SM00358 Double-stranded RNA binding motif AMS56_RS07395 SM00535 Ribonuclease III family AMS56_RS07425 SM00382 ATPases associated with a variety of cellular activities AMS56_RS07425 SM00448 cheY-homologous receiver domain AMS56_RS07430 SM00841 Elongation factor P, C-terminal AMS56_RS07430 SM01185 AMS56_RS07430 AMS56_RS07440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMS56_RS07440 SM00465 GIY-YIG type nucleases (URI domain) AMS56_RS07510 SM00382 ATPases associated with a variety of cellular activities AMS56_RS07570 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS56_RS07600 SM00382 ATPases associated with a variety of cellular activities AMS56_RS07605 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS07645 SM00062 Bacterial periplasmic substrate-binding proteins AMS56_RS07710 SM00382 ATPases associated with a variety of cellular activities AMS56_RS07725 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS56_RS07725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS56_RS07730 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS56_RS07735 SM00100 Cyclic nucleotide-monophosphate binding domain AMS56_RS07735 SM00419 helix_turn_helix, cAMP Regulatory protein AMS56_RS07825 SM00421 helix_turn_helix, Lux Regulon AMS56_RS07850 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS07850 SM00866 AMS56_RS07850 AMS56_RS07900 SM01230 AMS56_RS07900 AMS56_RS07970 SM00382 ATPases associated with a variety of cellular activities AMS56_RS07970 SM00487 DEAD-like helicases superfamily AMS56_RS07970 SM00490 helicase superfamily c-terminal domain AMS56_RS07970 SM00847 Helicase associated domain (HA2) Add an annotation AMS56_RS07990 SM00852 Probable molybdopterin binding domain AMS56_RS07995 SM00450 Rhodanese Homology Domain AMS56_RS08000 SM01230 AMS56_RS08000 AMS56_RS08005 SM00387 Histidine kinase-like ATPases AMS56_RS08005 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS08010 SM00382 ATPases associated with a variety of cellular activities AMS56_RS08010 SM00448 cheY-homologous receiver domain AMS56_RS08020 SM00421 helix_turn_helix, Lux Regulon AMS56_RS08020 SM00448 cheY-homologous receiver domain AMS56_RS08025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS56_RS08025 SM00387 Histidine kinase-like ATPases AMS56_RS08045 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMS56_RS08080 SM00421 helix_turn_helix, Lux Regulon AMS56_RS08080 SM00448 cheY-homologous receiver domain AMS56_RS08085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMS56_RS08085 SM00091 PAS domain AMS56_RS08085 SM00387 Histidine kinase-like ATPases AMS56_RS08085 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS08115 SM00346 helix_turn_helix isocitrate lyase regulation AMS56_RS08135 SM00226 Low molecular weight phosphatase family AMS56_RS08160 SM00271 DnaJ molecular chaperone homology domain AMS56_RS08190 SM00937 AMS56_RS08190 AMS56_RS08210 SM00382 ATPases associated with a variety of cellular activities AMS56_RS08220 SM00849 Metallo-beta-lactamase superfamily AMS56_RS08240 SM01192 AMS56_RS08240 AMS56_RS08240 SM01193 AMS56_RS08240 AMS56_RS08275 SM00481 DNA polymerase alpha chain like domain AMS56_RS08300 SM01130 AMS56_RS08300 AMS56_RS08310 SM00849 Metallo-beta-lactamase superfamily AMS56_RS08315 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMS56_RS08330 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AMS56_RS08330 SM00534 ATPase domain of DNA mismatch repair MUTS family AMS56_RS08375 SM00028 Tetratricopeptide repeats AMS56_RS08380 SM00840 AMS56_RS08380 AMS56_RS08385 SM00478 endonuclease III AMS56_RS08395 SM00977 TilS substrate C-terminal domain AMS56_RS08420 SM00869 Autotransporter beta-domain AMS56_RS08450 SM00823 Phosphopantetheine attachment site AMS56_RS08465 SM00823 Phosphopantetheine attachment site AMS56_RS08465 SM01294 AMS56_RS08465 AMS56_RS08500 SM00861 Transketolase, pyrimidine binding domain AMS56_RS08565 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS56_RS08575 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMS56_RS08610 SM00382 ATPases associated with a variety of cellular activities AMS56_RS08665 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS08705 SM00487 DEAD-like helicases superfamily AMS56_RS08705 SM00490 helicase superfamily c-terminal domain AMS56_RS08725 SM00986 Uracil DNA glycosylase superfamily AMS56_RS08725 SM00987 UreE urease accessory protein, C-terminal domain AMS56_RS08750 SM01005 Alanine racemase, C-terminal domain AMS56_RS08755 SM00382 ATPases associated with a variety of cellular activities AMS56_RS08765 SM00382 ATPases associated with a variety of cellular activities AMS56_RS08775 SM00155 Phospholipase D. Active site motifs. AMS56_RS08815 SM00968 SMC proteins Flexible Hinge Domain AMS56_RS08820 SM00771 ZipA, C-terminal domain (FtsZ-binding) AMS56_RS08830 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AMS56_RS08830 SM00292 breast cancer carboxy-terminal domain AMS56_RS08830 SM00532 Ligase N family AMS56_RS08840 SM00363 S4 RNA-binding domain AMS56_RS08845 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AMS56_RS08895 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMS56_RS08905 SM00935 Outer membrane protein (OmpH-like) AMS56_RS08945 SM00944 Pro-kumamolisin, activation domain AMS56_RS08970 SM00244 prohibitin homologues AMS56_RS09010 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS56_RS09010 SM01240 AMS56_RS09010 AMS56_RS09085 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS09085 SM00895 AMS56_RS09085 AMS56_RS09200 SM00487 DEAD-like helicases superfamily AMS56_RS09200 SM00490 helicase superfamily c-terminal domain AMS56_RS09200 SM00982 AMS56_RS09200 AMS56_RS09200 SM01058 CarD-like/TRCF domain AMS56_RS09225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS56_RS09225 SM00387 Histidine kinase-like ATPases AMS56_RS09225 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS09230 SM00448 cheY-homologous receiver domain AMS56_RS09230 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS09300 SM00155 Phospholipase D. Active site motifs. AMS56_RS09320 SM00421 helix_turn_helix, Lux Regulon AMS56_RS09330 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS56_RS09350 SM00382 ATPases associated with a variety of cellular activities AMS56_RS09350 SM00994 ClpX C4-type zinc finger AMS56_RS09350 SM01086 C-terminal, D2-small domain, of ClpB protein AMS56_RS09355 SM00382 ATPases associated with a variety of cellular activities AMS56_RS09355 SM00464 Found in ATP-dependent protease La (LON) AMS56_RS09410 SM00382 ATPases associated with a variety of cellular activities AMS56_RS09435 SM01211 AMS56_RS09435 AMS56_RS09495 SM00886 Stress responsive A/B Barrel Domain AMS56_RS09505 SM00829 Enoylreductase AMS56_RS09555 SM00248 ankyrin repeats AMS56_RS09595 SM00870 AMS56_RS09595 AMS56_RS09605 SM00257 Lysin motif AMS56_RS09675 SM00382 ATPases associated with a variety of cellular activities AMS56_RS09695 SM00670 Large family of predicted nucleotide-binding domains AMS56_RS09760 SM00852 Probable molybdopterin binding domain AMS56_RS09785 SM00382 ATPases associated with a variety of cellular activities AMS56_RS09785 SM01086 C-terminal, D2-small domain, of ClpB protein AMS56_RS09800 SM00422 helix_turn_helix, mercury resistance AMS56_RS09835 SM00422 helix_turn_helix, mercury resistance AMS56_RS09840 SM00357 Cold shock protein domain AMS56_RS09840 SM00382 ATPases associated with a variety of cellular activities AMS56_RS09840 SM00959 Rho termination factor, N-terminal domain AMS56_RS09855 SM00382 ATPases associated with a variety of cellular activities AMS56_RS09865 SM00493 AMS56_RS09865 AMS56_RS09885 SM00257 Lysin motif AMS56_RS09920 SM00562 AMS56_RS09920 AMS56_RS09930 SM00530 Helix-turn-helix XRE-family like proteins AMS56_RS09950 SM00564 beta-propeller repeat AMS56_RS09955 SM00382 ATPases associated with a variety of cellular activities AMS56_RS09970 SM00244 prohibitin homologues AMS56_RS09975 SM00244 prohibitin homologues AMS56_RS09990 SM00788 Adenylosuccinate synthetase AMS56_RS10015 SM00316 Ribosomal protein S1-like RNA-binding domain AMS56_RS10015 SM00732 Likely ribonuclease with RNase H fold. AMS56_RS10030 SM00491 AMS56_RS10030 AMS56_RS10040 SM00363 S4 RNA-binding domain AMS56_RS10070 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS56_RS10110 SM00382 ATPases associated with a variety of cellular activities AMS56_RS10120 SM00382 ATPases associated with a variety of cellular activities AMS56_RS10160 SM00382 ATPases associated with a variety of cellular activities AMS56_RS10185 SM00849 Metallo-beta-lactamase superfamily AMS56_RS10190 SM00091 PAS domain AMS56_RS10190 SM00382 ATPases associated with a variety of cellular activities AMS56_RS10215 SM00422 helix_turn_helix, mercury resistance AMS56_RS10240 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS56_RS10280 SM00354 helix_turn _helix lactose operon repressor AMS56_RS10340 SM00344 helix_turn_helix ASNC type AMS56_RS10415 SM00900 AMS56_RS10415 AMS56_RS10445 SM00382 ATPases associated with a variety of cellular activities AMS56_RS10450 SM00710 Parallel beta-helix repeats AMS56_RS10450 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses AMS56_RS10465 SM00382 ATPases associated with a variety of cellular activities AMS56_RS10475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS56_RS10475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS56_RS10485 SM01120 AMS56_RS10485 AMS56_RS10605 SM00421 helix_turn_helix, Lux Regulon AMS56_RS10605 SM00448 cheY-homologous receiver domain AMS56_RS10610 SM00387 Histidine kinase-like ATPases AMS56_RS10610 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS10610 SM00448 cheY-homologous receiver domain AMS56_RS10615 SM00052 Putative diguanylate phosphodiesterase AMS56_RS10625 SM00528 Domain in histone-like proteins of HNS family AMS56_RS10650 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS10650 SM00895 AMS56_RS10650 AMS56_RS10665 SM00903 Flavin reductase like domain AMS56_RS10700 SM00382 ATPases associated with a variety of cellular activities AMS56_RS10705 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS10705 SM00895 AMS56_RS10705 AMS56_RS10740 SM00191 Integrin alpha (beta-propellor repeats). AMS56_RS10755 SM00382 ATPases associated with a variety of cellular activities AMS56_RS10765 SM00028 Tetratricopeptide repeats AMS56_RS10780 SM00448 cheY-homologous receiver domain AMS56_RS10780 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS10850 SM00450 Rhodanese Homology Domain AMS56_RS10910 SM00823 Phosphopantetheine attachment site AMS56_RS10975 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AMS56_RS10980 SM00923 MbtH-like protein AMS56_RS10985 SM00823 Phosphopantetheine attachment site AMS56_RS10985 SM00824 Thioesterase AMS56_RS11000 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS11010 SM00260 Two component signalling adaptor domain AMS56_RS11015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS56_RS11055 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11110 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS56_RS11125 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS56_RS11180 SM00495 Chitin-binding domain type 3 AMS56_RS11200 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11215 SM00833 Cobalamin synthesis protein cobW C-terminal domain AMS56_RS11265 SM00823 Phosphopantetheine attachment site AMS56_RS11270 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11295 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11305 SM00923 MbtH-like protein AMS56_RS11325 SM00822 AMS56_RS11325 AMS56_RS11345 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11355 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS11370 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11435 SM00062 Bacterial periplasmic substrate-binding proteins AMS56_RS11465 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11505 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11535 SM00763 PrkA AAA domain AMS56_RS11540 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS56_RS11540 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS56_RS11550 SM00354 helix_turn _helix lactose operon repressor AMS56_RS11560 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11575 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11615 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11690 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11750 SM00062 Bacterial periplasmic substrate-binding proteins AMS56_RS11750 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AMS56_RS11765 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS11765 SM00895 AMS56_RS11765 AMS56_RS11775 SM00644 AMS56_RS11775 AMS56_RS11785 SM00967 RNA 2'-O ribose methyltransferase substrate binding AMS56_RS11790 SM00316 Ribosomal protein S1-like RNA-binding domain AMS56_RS11790 SM00357 Cold shock protein domain AMS56_RS11790 SM00955 AMS56_RS11790 AMS56_RS11805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS56_RS11805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS56_RS11885 SM00382 ATPases associated with a variety of cellular activities AMS56_RS11900 SM00028 Tetratricopeptide repeats AMS56_RS11930 SM00858 AMS56_RS11930 AMS56_RS11995 SM00861 Transketolase, pyrimidine binding domain AMS56_RS12005 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS56_RS12040 SM00316 Ribosomal protein S1-like RNA-binding domain AMS56_RS12040 SM00322 K homology RNA-binding domain AMS56_RS12050 SM00363 S4 RNA-binding domain AMS56_RS12130 SM00422 helix_turn_helix, mercury resistance AMS56_RS12135 SM00411 bacterial (prokaryotic) histone like domain AMS56_RS12140 SM00873 B3/4 domain AMS56_RS12140 SM00874 tRNA synthetase B5 domain AMS56_RS12140 SM00896 Ferredoxin-fold anticodon binding domain AMS56_RS12165 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMS56_RS12175 SM00954 Region found in RelA / SpoT proteins AMS56_RS12215 SM00882 Coenzyme A transferase AMS56_RS12220 SM00882 Coenzyme A transferase AMS56_RS12225 SM00421 helix_turn_helix, Lux Regulon AMS56_RS12245 SM00822 AMS56_RS12245 AMS56_RS12275 SM00563 Phosphate acyltransferases AMS56_RS12280 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS56_RS12345 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS56_RS12380 SM00387 Histidine kinase-like ATPases AMS56_RS12380 SM01080 AMS56_RS12380 AMS56_RS12390 SM00448 cheY-homologous receiver domain AMS56_RS12390 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS12430 SM00382 ATPases associated with a variety of cellular activities AMS56_RS12455 SM00382 ATPases associated with a variety of cellular activities AMS56_RS12460 SM00382 ATPases associated with a variety of cellular activities AMS56_RS12495 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMS56_RS12515 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMS56_RS12590 SM00421 helix_turn_helix, Lux Regulon AMS56_RS12590 SM00448 cheY-homologous receiver domain AMS56_RS12595 SM00387 Histidine kinase-like ATPases AMS56_RS12595 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS12595 SM00448 cheY-homologous receiver domain AMS56_RS12600 SM00972 Spore Coat Protein U domain AMS56_RS12615 SM00972 Spore Coat Protein U domain AMS56_RS12620 SM00972 Spore Coat Protein U domain AMS56_RS12625 SM00972 Spore Coat Protein U domain AMS56_RS12760 SM00458 Ricin-type beta-trefoil AMS56_RS12760 SM00612 AMS56_RS12760 AMS56_RS12780 SM00528 Domain in histone-like proteins of HNS family AMS56_RS12785 SM00028 Tetratricopeptide repeats AMS56_RS12805 SM00448 cheY-homologous receiver domain AMS56_RS12805 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS12830 SM00448 cheY-homologous receiver domain AMS56_RS12830 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS12860 SM00060 Fibronectin type 3 domain AMS56_RS12870 SM00642 Alpha-amylase domain AMS56_RS12875 SM00642 Alpha-amylase domain AMS56_RS12880 SM00642 Alpha-amylase domain AMS56_RS12885 SM00642 Alpha-amylase domain AMS56_RS12890 SM00642 Alpha-amylase domain AMS56_RS12900 SM00642 Alpha-amylase domain AMS56_RS12915 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS12920 SM00422 helix_turn_helix, mercury resistance AMS56_RS13040 SM00257 Lysin motif AMS56_RS13075 SM00855 Phosphoglycerate mutase family AMS56_RS13130 SM00387 Histidine kinase-like ATPases AMS56_RS13130 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS13135 SM00448 cheY-homologous receiver domain AMS56_RS13135 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS13145 SM00382 ATPases associated with a variety of cellular activities AMS56_RS13175 SM00382 ATPases associated with a variety of cellular activities AMS56_RS13185 SM01103 AMS56_RS13185 AMS56_RS13200 SM00851 MGS-like domain AMS56_RS13200 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMS56_RS13210 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMS56_RS13220 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS13240 SM00257 Lysin motif AMS56_RS13245 SM00849 Metallo-beta-lactamase superfamily AMS56_RS13260 SM00479 AMS56_RS13260 AMS56_RS13295 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AMS56_RS13385 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS13435 SM00344 helix_turn_helix ASNC type AMS56_RS13440 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS13460 SM00267 diguanylate cyclase AMS56_RS13515 SM00382 ATPases associated with a variety of cellular activities AMS56_RS13585 SM00354 helix_turn _helix lactose operon repressor AMS56_RS13615 SM00382 ATPases associated with a variety of cellular activities AMS56_RS13700 SM00052 Putative diguanylate phosphodiesterase AMS56_RS13755 SM00382 ATPases associated with a variety of cellular activities AMS56_RS13760 SM00344 helix_turn_helix ASNC type AMS56_RS13790 SM00346 helix_turn_helix isocitrate lyase regulation AMS56_RS13825 SM00052 Putative diguanylate phosphodiesterase AMS56_RS13825 SM00267 diguanylate cyclase AMS56_RS13880 SM00062 Bacterial periplasmic substrate-binding proteins AMS56_RS13895 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS13945 SM00421 helix_turn_helix, Lux Regulon AMS56_RS13960 SM00631 AMS56_RS13960 AMS56_RS13990 SM00855 Phosphoglycerate mutase family AMS56_RS14005 SM00710 Parallel beta-helix repeats AMS56_RS14080 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AMS56_RS14085 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AMS56_RS14130 SM00829 Enoylreductase AMS56_RS14135 SM00316 Ribosomal protein S1-like RNA-binding domain AMS56_RS14135 SM00322 K homology RNA-binding domain AMS56_RS14140 SM01387 AMS56_RS14140 AMS56_RS14160 SM00947 Carbonic anhydrase AMS56_RS14170 SM00917 LeuA allosteric (dimerisation) domain AMS56_RS14270 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AMS56_RS14305 SM00448 cheY-homologous receiver domain AMS56_RS14305 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS14310 SM00387 Histidine kinase-like ATPases AMS56_RS14310 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS14340 SM00829 Enoylreductase AMS56_RS14345 SM00851 MGS-like domain AMS56_RS14365 SM01209 AMS56_RS14365 AMS56_RS14365 SM01210 AMS56_RS14365 AMS56_RS14395 SM00316 Ribosomal protein S1-like RNA-binding domain AMS56_RS14490 SM00382 ATPases associated with a variety of cellular activities AMS56_RS14495 SM00481 DNA polymerase alpha chain like domain AMS56_RS14505 SM00450 Rhodanese Homology Domain AMS56_RS14515 SM00487 DEAD-like helicases superfamily AMS56_RS14515 SM00490 helicase superfamily c-terminal domain AMS56_RS14545 SM00382 ATPases associated with a variety of cellular activities AMS56_RS14545 SM00843 AMS56_RS14545 AMS56_RS14575 SM00478 endonuclease III AMS56_RS14600 SM00382 ATPases associated with a variety of cellular activities AMS56_RS14645 SM00986 Uracil DNA glycosylase superfamily AMS56_RS14645 SM00987 UreE urease accessory protein, C-terminal domain AMS56_RS14655 SM00387 Histidine kinase-like ATPases AMS56_RS14660 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS14690 SM00052 Putative diguanylate phosphodiesterase AMS56_RS14690 SM00267 diguanylate cyclase AMS56_RS14740 SM00434 DNA Topoisomerase IV AMS56_RS14745 SM00387 Histidine kinase-like ATPases AMS56_RS14745 SM00433 TopoisomeraseII AMS56_RS14750 SM00382 ATPases associated with a variety of cellular activities AMS56_RS14780 SM00316 Ribosomal protein S1-like RNA-binding domain AMS56_RS14885 SM00382 ATPases associated with a variety of cellular activities AMS56_RS14900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AMS56_RS14900 SM00387 Histidine kinase-like ATPases AMS56_RS14900 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS14905 SM00448 cheY-homologous receiver domain AMS56_RS14905 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS14920 SM00062 Bacterial periplasmic substrate-binding proteins AMS56_RS14935 SM00382 ATPases associated with a variety of cellular activities AMS56_RS14945 SM00938 Nitrogen regulatory protein P-II AMS56_RS14995 SM00028 Tetratricopeptide repeats AMS56_RS15025 SM00530 Helix-turn-helix XRE-family like proteins AMS56_RS15030 SM00972 Spore Coat Protein U domain AMS56_RS15035 SM00972 Spore Coat Protein U domain AMS56_RS15175 SM00855 Phosphoglycerate mutase family AMS56_RS15190 SM00382 ATPases associated with a variety of cellular activities AMS56_RS15320 SM00530 Helix-turn-helix XRE-family like proteins AMS56_RS15325 SM01007 Class II Aldolase and Adducin N-terminal domain AMS56_RS15330 SM01130 AMS56_RS15330 AMS56_RS15395 SM00382 ATPases associated with a variety of cellular activities AMS56_RS15400 SM00382 ATPases associated with a variety of cellular activities AMS56_RS15485 SM00904 Riboflavin kinase AMS56_RS15525 SM00382 ATPases associated with a variety of cellular activities AMS56_RS15525 SM01086 C-terminal, D2-small domain, of ClpB protein AMS56_RS15535 SM00357 Cold shock protein domain AMS56_RS15545 SM01329 AMS56_RS15545 AMS56_RS15560 SM00838 Elongation factor G C-terminus AMS56_RS15560 SM00889 Elongation factor G, domain IV AMS56_RS15585 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS15585 SM00866 AMS56_RS15585 AMS56_RS15610 SM00052 Putative diguanylate phosphodiesterase AMS56_RS15630 SM00100 Cyclic nucleotide-monophosphate binding domain AMS56_RS15630 SM00419 helix_turn_helix, cAMP Regulatory protein AMS56_RS15720 SM01207 AMS56_RS15720 AMS56_RS15755 SM00646 AMS56_RS15755 AMS56_RS15810 SM00903 Flavin reductase like domain AMS56_RS15815 SM00344 helix_turn_helix ASNC type AMS56_RS15905 SM00382 ATPases associated with a variety of cellular activities AMS56_RS15940 SM00822 AMS56_RS15940 AMS56_RS15955 SM00382 ATPases associated with a variety of cellular activities AMS56_RS15970 SM00829 Enoylreductase AMS56_RS15975 SM00342 helix_turn_helix, arabinose operon control protein AMS56_RS16025 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMS56_RS16035 SM00387 Histidine kinase-like ATPases AMS56_RS16035 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS16040 SM00448 cheY-homologous receiver domain AMS56_RS16040 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS16070 SM01001 AIR carboxylase AMS56_RS16170 SM00881 CoA binding domain AMS56_RS16190 SM00382 ATPases associated with a variety of cellular activities AMS56_RS16195 SM00448 cheY-homologous receiver domain AMS56_RS16195 SM00862 Transcriptional regulatory protein, C terminal AMS56_RS16200 SM00387 Histidine kinase-like ATPases AMS56_RS16200 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS16280 SM00448 cheY-homologous receiver domain AMS56_RS16290 SM00387 Histidine kinase-like ATPases AMS56_RS16290 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS16290 SM00448 cheY-homologous receiver domain AMS56_RS16330 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMS56_RS16400 SM00382 ATPases associated with a variety of cellular activities AMS56_RS16415 SM00450 Rhodanese Homology Domain AMS56_RS16440 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AMS56_RS16440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS56_RS16455 SM00448 cheY-homologous receiver domain AMS56_RS16460 SM00387 Histidine kinase-like ATPases AMS56_RS16485 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AMS56_RS16505 SM00487 DEAD-like helicases superfamily AMS56_RS16505 SM00490 helicase superfamily c-terminal domain AMS56_RS16525 SM00420 helix_turn_helix, Deoxyribose operon repressor AMS56_RS16525 SM01134 AMS56_RS16525 AMS56_RS16595 SM00530 Helix-turn-helix XRE-family like proteins AMS56_RS16610 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS56_RS16630 SM01091 Transporter associated domain AMS56_RS16645 SM00836 DALR anticodon binding domain AMS56_RS16655 SM00563 Phosphate acyltransferases AMS56_RS16675 SM00650 Ribosomal RNA adenine dimethylases AMS56_RS16710 SM00382 ATPases associated with a variety of cellular activities AMS56_RS16755 SM00155 Phospholipase D. Active site motifs. AMS56_RS16775 SM00834 Putative regulatory protein AMS56_RS16795 SM00978 AMS56_RS16795 AMS56_RS16850 SM01119 AMS56_RS16850 AMS56_RS16860 SM00347 helix_turn_helix multiple antibiotic resistance protein AMS56_RS16880 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. AMS56_RS16905 SM00419 helix_turn_helix, cAMP Regulatory protein AMS56_RS16945 SM00382 ATPases associated with a variety of cellular activities AMS56_RS16980 SM00052 Putative diguanylate phosphodiesterase AMS56_RS16980 SM00267 diguanylate cyclase AMS56_RS16985 SM01007 Class II Aldolase and Adducin N-terminal domain AMS56_RS17005 SM00220 Serine/Threonine protein kinases, catalytic domain AMS56_RS17010 SM00240 Forkhead associated domain AMS56_RS17090 SM00490 helicase superfamily c-terminal domain AMS56_RS17110 SM00530 Helix-turn-helix XRE-family like proteins AMS56_RS17190 SM00116 Domain in cystathionine beta-synthase and other proteins. AMS56_RS17210 SM00382 ATPases associated with a variety of cellular activities AMS56_RS17240 SM00464 Found in ATP-dependent protease La (LON) AMS56_RS17245 SM00478 endonuclease III AMS56_RS17250 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AMS56_RS17250 SM01232 AMS56_RS17250 AMS56_RS17255 SM00028 Tetratricopeptide repeats AMS56_RS17275 SM01400 AMS56_RS17275 AMS56_RS17310 SM00382 ATPases associated with a variety of cellular activities AMS56_RS17310 SM00962 SRP54-type protein, GTPase domain AMS56_RS17310 SM00963 SRP54-type protein, helical bundle domain AMS56_RS17335 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AMS56_RS17395 SM01081 Putative carbohydrate binding domain AMS56_RS17420 SM00345 helix_turn_helix gluconate operon transcriptional repressor AMS56_RS17420 SM00866 AMS56_RS17420 AMS56_RS17500 SM00382 ATPases associated with a variety of cellular activities AMS56_RS17535 SM00481 DNA polymerase alpha chain like domain AMS56_RS17550 SM00382 ATPases associated with a variety of cellular activities AMS56_RS17570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AMS56_RS17570 SM01049 AMS56_RS17570 AMS56_RS17660 SM00506 Appr-1"-p processing enzyme AMS56_RS17680 SM00450 Rhodanese Homology Domain AMS56_RS17685 SM00855 Phosphoglycerate mutase family AMS56_RS17690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AMS56_RS17690 SM00245 tail specific protease AMS56_RS17730 SM00938 Nitrogen regulatory protein P-II AMS56_RS17740 SM00382 ATPases associated with a variety of cellular activities AMS56_RS17770 SM00382 ATPases associated with a variety of cellular activities AMS56_RS17770 SM00448 cheY-homologous receiver domain AMS56_RS17775 SM00387 Histidine kinase-like ATPases AMS56_RS17775 SM00388 His Kinase A (phosphoacceptor) domain AMS56_RS17840 SM00729 Elongator protein 3, MiaB family, Radical SAM AMS56_RS17870 SM00936 Penicillin-binding protein 5, C-terminal domain AMS56_RS17900 SM00382 ATPases associated with a variety of cellular activities AMS56_RS17915 SM00671 Sel1-like repeats. AMS56_RS17965 SM00346 helix_turn_helix isocitrate lyase regulation AMS56_RS17985 SM01018 B12 binding domain AMS56_RS20405 SM01231 AMS56_RS20405 AMS56_RS21715 SM00842 Cell division protein FtsA AMS56_RS21740 SM00957 SecA DEAD-like domain AMS56_RS21740 SM00958 SecA preprotein cross-linking domain AMS56_RS24080 SM00434 DNA Topoisomerase IV AMS56_RS25160 SM00487 DEAD-like helicases superfamily AMS56_RS27165 SM00382 ATPases associated with a variety of cellular activities AMS56_RS27395 SM00900 AMS56_RS27395 AMS56_RS27645 SM00191 Integrin alpha (beta-propellor repeats). AMS56_RS29930 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AMS56_RS29955 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AMS56_RS30350 SM00052 Putative diguanylate phosphodiesterase