JE55_RS00005 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like JE55_RS00005 IPR023190 Phosphoserine phosphatase, domain 2 JE55_RS00005 IPR023214 HAD-like domain JE55_RS00005 IPR025138 Domain of unknown function DUF4072 JE55_RS00010 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme JE55_RS00010 IPR006233 Cystathionine beta-lyase, bacterial JE55_RS00010 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS00010 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS00010 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS00020 IPR002155 Thiolase JE55_RS00020 IPR016039 Thiolase-like JE55_RS00020 IPR020610 Thiolase, active site JE55_RS00020 IPR020615 Thiolase, acyl-enzyme intermediate active site JE55_RS00020 IPR020616 Thiolase, N-terminal JE55_RS00020 IPR020617 Thiolase, C-terminal JE55_RS00025 IPR011611 Carbohydrate kinase PfkB JE55_RS00025 IPR029056 Ribokinase-like JE55_RS00030 IPR002792 TRAM domain JE55_RS00030 IPR005839 Methylthiotransferase JE55_RS00030 IPR005840 Ribosomal protein S12 methylthiotransferase RimO JE55_RS00030 IPR006638 Elongator protein 3/MiaB/NifB JE55_RS00030 IPR007197 Radical SAM JE55_RS00030 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00030 IPR013848 Methylthiotransferase, N-terminal JE55_RS00030 IPR020612 Methylthiotransferase, conserved site JE55_RS00030 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS00030 IPR023970 Methylthiotransferase/radical SAM-type protein JE55_RS00035 IPR007897 PHB accumulation regulatory JE55_RS00035 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR JE55_RS00035 IPR012909 PHA accumulation regulator DNA-binding, N-terminal JE55_RS00040 IPR002347 Glucose/ribitol dehydrogenase JE55_RS00040 IPR011283 Acetoacetyl-CoA reductase JE55_RS00040 IPR016040 NAD(P)-binding domain JE55_RS00040 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS00045 IPR002155 Thiolase JE55_RS00045 IPR016039 Thiolase-like JE55_RS00045 IPR020610 Thiolase, active site JE55_RS00045 IPR020613 Thiolase, conserved site JE55_RS00045 IPR020615 Thiolase, acyl-enzyme intermediate active site JE55_RS00045 IPR020616 Thiolase, N-terminal JE55_RS00045 IPR020617 Thiolase, C-terminal JE55_RS00050 IPR010941 Poly-beta-hydroxybutyrate polymerase, central domain JE55_RS00050 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I JE55_RS00050 IPR029058 Alpha/Beta hydrolase fold JE55_RS00055 IPR003730 Multi-copper polyphenol oxidoreductase, laccase JE55_RS00055 IPR011324 Cytotoxic necrotizing factor-like, catalytic JE55_RS00060 IPR002942 RNA-binding S4 domain JE55_RS00060 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JE55_RS00060 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JE55_RS00060 IPR006225 Pseudouridine synthase, RluC/RluD JE55_RS00060 IPR020103 Pseudouridine synthase, catalytic domain JE55_RS00065 IPR011990 Tetratricopeptide-like helical domain JE55_RS00065 IPR017689 Outer membrane protein assembly factor BamD JE55_RS00070 IPR006555 ATP-dependent helicase, C-terminal JE55_RS00070 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00075 IPR007420 Protein of unknown function DUF465 JE55_RS00085 IPR003029 Ribosomal protein S1, RNA-binding domain JE55_RS00085 IPR006641 YqgF/RNase H-like domain JE55_RS00085 IPR010994 RuvA domain 2-like JE55_RS00085 IPR012337 Ribonuclease H-like domain JE55_RS00085 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00085 IPR018974 Tex-like protein, N-terminal JE55_RS00085 IPR022967 RNA-binding domain, S1 JE55_RS00085 IPR023097 Tex RuvX-like domain JE55_RS00085 IPR023319 Tex-like protein, HTH domain JE55_RS00085 IPR023323 Tex-like domain JE55_RS00085 IPR032639 JE55_RS00085 JE55_RS00090 IPR003855 K+ potassium transporter JE55_RS00090 IPR023051 Potassium uptake protein, low affinity, Kup JE55_RS00095 IPR000836 Phosphoribosyltransferase domain JE55_RS00095 IPR029057 Phosphoribosyltransferase-like JE55_RS00100 IPR001114 Adenylosuccinate synthetase JE55_RS00100 IPR018220 Adenylosuccinate synthase, active site JE55_RS00100 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00100 IPR033128 JE55_RS00100 JE55_RS00105 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit JE55_RS00105 IPR004517 ATP phosphoribosyltransferase regulatory subunit JE55_RS00110 IPR019201 Protein of unknown function DUF2065 JE55_RS00115 IPR001107 Band 7 protein JE55_RS00115 IPR001972 Stomatin family JE55_RS00115 IPR010200 HflC JE55_RS00120 IPR001107 Band 7 protein JE55_RS00120 IPR001972 Stomatin family JE55_RS00120 IPR010201 HflK JE55_RS00120 IPR020980 Menbrane protein HflK, N-terminal JE55_RS00125 IPR006073 GTP binding domain JE55_RS00125 IPR016496 GTPase HflX JE55_RS00125 IPR025121 GTPase HflX N-terminal domain JE55_RS00125 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00125 IPR032305 JE55_RS00125 JE55_RS00130 IPR005001 Host factor Hfq JE55_RS00130 IPR010920 Like-Sm (LSM) domain JE55_RS00135 IPR003593 AAA+ ATPase domain JE55_RS00135 IPR005225 Small GTP-binding protein domain JE55_RS00135 IPR006073 GTP binding domain JE55_RS00135 IPR015946 K homology domain-like, alpha/beta JE55_RS00135 IPR016484 GTP-binding protein EngA JE55_RS00135 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00135 IPR032859 JE55_RS00135 JE55_RS00140 IPR002372 Pyrrolo-quinoline quinone repeat JE55_RS00140 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily JE55_RS00140 IPR017687 Outer membrane protein assembly factor BamB JE55_RS00140 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JE55_RS00140 IPR027295 Quinonprotein alcohol dehydrogenase-like domain JE55_RS00145 IPR018704 Domain of unknown function DUF09976 JE55_RS00145 IPR026039 Uncharacterised protein family UPF0070 JE55_RS00150 IPR004154 Anticodon-binding JE55_RS00150 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit JE55_RS00150 IPR015807 Histidine-tRNA ligase JE55_RS00155 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type JE55_RS00155 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial JE55_RS00160 IPR001387 Cro/C1-type helix-turn-helix domain JE55_RS00160 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS00160 IPR025194 Domain of unknown function DUF4115 JE55_RS00165 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr JE55_RS00165 IPR007197 Radical SAM JE55_RS00165 IPR013785 Aldolase-type TIM barrel JE55_RS00165 IPR027492 Dual-specificity RNA methyltransferase RlmN JE55_RS00170 IPR001564 Nucleoside diphosphate kinase JE55_RS00170 IPR023005 Nucleoside diphosphate kinase, active site JE55_RS00175 IPR006214 Bax inhibitor 1-related JE55_RS00180 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD JE55_RS00180 IPR010280 (Uracil-5)-methyltransferase family JE55_RS00180 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS00180 IPR030391 JE55_RS00180 JE55_RS00185 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS00195 IPR012337 Ribonuclease H-like domain JE55_RS00195 IPR019288 Predicted 3'-5' exonuclease, PolB-like JE55_RS00200 IPR000943 RNA polymerase sigma-70 JE55_RS00200 IPR007624 RNA polymerase sigma-70 region 3 JE55_RS00200 IPR007627 RNA polymerase sigma-70 region 2 JE55_RS00200 IPR007630 RNA polymerase sigma-70 region 4 JE55_RS00200 IPR009042 RNA polymerase sigma-70 region 1.2 JE55_RS00200 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00200 IPR012761 RNA polymerase sigma factor RpoS JE55_RS00200 IPR013324 RNA polymerase sigma factor, region 3/4 JE55_RS00200 IPR013325 RNA polymerase sigma factor, region 2 JE55_RS00200 IPR014284 RNA polymerase sigma-70 like domain JE55_RS00205 IPR011055 Duplicated hybrid motif JE55_RS00205 IPR016047 Peptidase M23 JE55_RS00205 IPR018392 LysM domain JE55_RS00210 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase JE55_RS00210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS00215 IPR002828 Survival protein SurE-like phosphatase/nucleotidase JE55_RS00215 IPR030048 JE55_RS00215 JE55_RS00220 IPR003673 CoA-transferase family III JE55_RS00220 IPR023606 CoA-transferase family III domain JE55_RS00225 IPR000093 DNA recombination protein RecR JE55_RS00225 IPR006171 Toprim domain JE55_RS00225 IPR015967 Recombination protein RecR, conserved site JE55_RS00225 IPR023627 Recombination protein RecR JE55_RS00225 IPR023628 Recombination protein RecR, C4-type zinc finger JE55_RS00230 IPR004401 Nucleoid-associated protein YbaB JE55_RS00235 IPR003593 AAA+ ATPase domain JE55_RS00235 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JE55_RS00235 IPR012763 DNA polymerase III, subunit gamma/ tau JE55_RS00235 IPR021029 DNA polymerase III, tau subunit, domain V JE55_RS00235 IPR022754 DNA polymerase III, gamma subunit, domain III JE55_RS00235 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00240 IPR005746 Thioredoxin JE55_RS00240 IPR012336 Thioredoxin-like fold JE55_RS00240 IPR013766 Thioredoxin domain JE55_RS00240 IPR017937 Thioredoxin, conserved site JE55_RS00250 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JE55_RS00250 IPR003593 AAA+ ATPase domain JE55_RS00250 IPR004665 Transcription termination factor Rho JE55_RS00250 IPR011112 Rho termination factor, N-terminal JE55_RS00250 IPR011113 Rho termination factor, RNA-binding JE55_RS00250 IPR011129 Cold shock protein JE55_RS00250 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00250 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00255 IPR000551 MerR-type HTH domain JE55_RS00255 IPR009061 DNA binding domain, putative JE55_RS00260 IPR011701 Major facilitator superfamily JE55_RS00260 IPR020846 Major facilitator superfamily domain JE55_RS00265 IPR010384 MtfA family JE55_RS00265 IPR024079 Metallopeptidase, catalytic domain JE55_RS00270 IPR002150 Ribosomal protein L31 JE55_RS00270 IPR027493 Ribosomal protein L31 type B JE55_RS00280 IPR002528 Multi antimicrobial extrusion protein JE55_RS00285 IPR003779 Carboxymuconolactone decarboxylase-like JE55_RS00285 IPR029032 AhpD-like JE55_RS00290 IPR000551 MerR-type HTH domain JE55_RS00290 IPR009061 DNA binding domain, putative JE55_RS00295 IPR010994 RuvA domain 2-like JE55_RS00300 IPR009282 Protein of unknown function DUF937 JE55_RS00300 IPR027405 YidB-like JE55_RS00305 IPR001270 ClpA/B family JE55_RS00305 IPR003593 AAA+ ATPase domain JE55_RS00305 IPR003959 ATPase, AAA-type, core JE55_RS00305 IPR004176 Clp, N-terminal JE55_RS00305 IPR017730 Chaperonin ClpB JE55_RS00305 IPR018368 ClpA/B, conserved site 1 JE55_RS00305 IPR019489 Clp ATPase, C-terminal JE55_RS00305 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00305 IPR028299 ClpA/B, conserved site 2 JE55_RS00310 IPR000944 Transcription regulator Rrf2-like JE55_RS00310 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00315 IPR009050 Globin-like JE55_RS00315 IPR012292 Globin, structural domain JE55_RS00320 IPR003448 Molybdopterin biosynthesis MoaE JE55_RS00325 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 JE55_RS00325 IPR010034 Molybdopterin converting factor, subunit 1 JE55_RS00325 IPR012675 Beta-grasp domain JE55_RS00325 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JE55_RS00330 IPR001453 Molybdopterin binding domain JE55_RS00330 IPR005110 MoeA, N-terminal and linker domain JE55_RS00330 IPR005111 MoeA, C-terminal, domain IV JE55_RS00330 IPR008284 Molybdenum cofactor biosynthesis, conserved site JE55_RS00335 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site JE55_RS00335 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS00335 IPR004450 Threonine synthase-like JE55_RS00335 IPR029144 Threonine synthase, N-terminal JE55_RS00340 IPR001342 Homoserine dehydrogenase, catalytic JE55_RS00340 IPR002912 ACT domain JE55_RS00340 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding JE55_RS00340 IPR016040 NAD(P)-binding domain JE55_RS00340 IPR016204 Homoserine dehydrogenase JE55_RS00340 IPR019811 Homoserine dehydrogenase, conserved site JE55_RS00345 IPR004839 Aminotransferase, class I/classII JE55_RS00345 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS00345 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS00345 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS00350 IPR007523 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 JE55_RS00360 IPR000390 Small multidrug resistance protein family JE55_RS00365 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JE55_RS00365 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS00365 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS00365 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS00370 IPR001173 Glycosyltransferase 2-like JE55_RS00370 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS00375 IPR002376 Formyl transferase, N-terminal JE55_RS00375 IPR005793 Formyl transferase, C-terminal JE55_RS00375 IPR011034 Formyl transferase, C-terminal-like JE55_RS00380 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain JE55_RS00380 IPR016040 NAD(P)-binding domain JE55_RS00385 IPR002509 Polysaccharide deacetylase JE55_RS00385 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JE55_RS00390 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JE55_RS00390 IPR012336 Thioredoxin-like fold JE55_RS00390 IPR024706 Peroxiredoxin, AhpC-type JE55_RS00395 IPR002716 PIN domain JE55_RS00395 IPR003714 PhoH-like protein JE55_RS00395 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00395 IPR029060 PIN domain-like JE55_RS00400 IPR000064 Endopeptidase, NLPC/P60 domain JE55_RS00405 IPR001204 Phosphate transporter JE55_RS00410 IPR018445 Putitive phosphate transport regulator JE55_RS00415 IPR003593 AAA+ ATPase domain JE55_RS00415 IPR007692 DNA helicase, DnaB type JE55_RS00415 IPR007693 DNA helicase, DnaB-like, N-terminal JE55_RS00415 IPR007694 DNA helicase, DnaB-like, C-terminal JE55_RS00415 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JE55_RS00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00420 IPR000244 Ribosomal protein L9 JE55_RS00420 IPR009027 Ribosomal protein L9/RNase H1, N-terminal JE55_RS00420 IPR020069 Ribosomal protein L9, C-terminal JE55_RS00420 IPR020070 Ribosomal protein L9, N-terminal JE55_RS00420 IPR020594 Ribosomal protein L9, bacteria/chloroplast JE55_RS00425 IPR001648 Ribosomal protein S18 JE55_RS00425 IPR018275 Ribosomal protein S18, conserved site JE55_RS00430 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00430 IPR023646 Primosomal replication protein PriB JE55_RS00435 IPR000529 Ribosomal protein S6 JE55_RS00435 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 JE55_RS00435 IPR020814 Ribosomal protein S6, plastid/chloroplast JE55_RS00440 IPR027383 Putative zinc-finger JE55_RS00445 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site JE55_RS00445 IPR007627 RNA polymerase sigma-70 region 2 JE55_RS00445 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00445 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JE55_RS00445 IPR013324 RNA polymerase sigma factor, region 3/4 JE55_RS00445 IPR013325 RNA polymerase sigma factor, region 2 JE55_RS00445 IPR014284 RNA polymerase sigma-70 like domain JE55_RS00450 IPR004843 Calcineurin-like phosphoesterase domain, apaH type JE55_RS00450 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JE55_RS00450 IPR029052 Metallo-dependent phosphatase-like JE55_RS00455 IPR008972 Cupredoxin JE55_RS00455 IPR028096 EfeO-type cupredoxin-like domain JE55_RS00460 IPR000847 Transcription regulator HTH, LysR JE55_RS00460 IPR005119 LysR, substrate-binding JE55_RS00460 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00465 IPR006397 Glyoxylate carboligase JE55_RS00465 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JE55_RS00465 IPR012000 Thiamine pyrophosphate enzyme, central domain JE55_RS00465 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JE55_RS00465 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS00465 IPR029061 Thiamin diphosphate-binding fold JE55_RS00470 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS00470 IPR017643 Hydroxypyruvate isomerase JE55_RS00470 IPR026040 Hydroxypyruvate isomerase-like JE55_RS00475 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site JE55_RS00475 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding JE55_RS00475 IPR006398 2-hydroxy-3-oxopropionate reductase JE55_RS00475 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS00475 IPR013328 Dehydrogenase, multihelical JE55_RS00475 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type JE55_RS00475 IPR016040 NAD(P)-binding domain JE55_RS00475 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain JE55_RS00480 IPR007055 BON domain JE55_RS00480 IPR018392 LysM domain JE55_RS00490 IPR004550 L-asparaginase, type II JE55_RS00490 IPR006034 Asparaginase/glutaminase JE55_RS00490 IPR020827 Asparaginase/glutaminase, active site 1 JE55_RS00490 IPR027473 L-asparaginase, C-terminal domain JE55_RS00490 IPR027474 L-asparaginase, N-terminal JE55_RS00490 IPR027475 Asparaginase/glutaminase, active site 2 JE55_RS00495 IPR011690 Phosphate-starvation-induced PsiF repeat JE55_RS00505 IPR007461 Ysc84 actin-binding domain JE55_RS00515 IPR001296 Glycosyl transferase, family 1 JE55_RS00515 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain JE55_RS00520 IPR003959 ATPase, AAA-type, core JE55_RS00520 IPR014555 RecF-like JE55_RS00520 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00525 IPR006685 Mechanosensitive ion channel MscS JE55_RS00525 IPR010920 Like-Sm (LSM) domain JE55_RS00535 IPR002110 Ankyrin repeat JE55_RS00535 IPR020683 Ankyrin repeat-containing domain JE55_RS00540 IPR001130 TatD family JE55_RS00540 IPR015991 Uncharacterised deoxyribonuclease TatD-type JE55_RS00540 IPR018228 Deoxyribonuclease, TatD-related, conserved site JE55_RS00540 IPR032466 JE55_RS00540 JE55_RS00545 IPR016181 Acyl-CoA N-acyltransferase JE55_RS00550 IPR004622 DNA polymerase III, delta prime subunit JE55_RS00550 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00555 IPR018094 Thymidylate kinase JE55_RS00555 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00560 IPR003770 Uncharacterised protein family UPF0755, YceG-like JE55_RS00560 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain JE55_RS00565 IPR006222 Glycine cleavage T-protein, N-terminal JE55_RS00565 IPR017703 YgfZ/GcvT conserved site JE55_RS00570 IPR008551 Protein of unknown function DUF833 JE55_RS00575 IPR000182 GNAT domain JE55_RS00575 IPR016181 Acyl-CoA N-acyltransferase JE55_RS00580 IPR013094 Alpha/beta hydrolase fold-3 JE55_RS00580 IPR029058 Alpha/Beta hydrolase fold JE55_RS00585 IPR002085 Alcohol dehydrogenase superfamily, zinc-type JE55_RS00585 IPR011032 GroES (chaperonin 10)-like JE55_RS00585 IPR013149 Alcohol dehydrogenase, C-terminal JE55_RS00585 IPR016040 NAD(P)-binding domain JE55_RS00585 IPR020843 Polyketide synthase, enoylreductase JE55_RS00590 IPR003736 Phenylacetic acid degradation-related domain JE55_RS00590 IPR006683 Thioesterase superfamily JE55_RS00590 IPR029069 HotDog domain JE55_RS00595 IPR011008 Dimeric alpha-beta barrel JE55_RS00595 IPR013097 Stress responsive alpha-beta barrel JE55_RS00605 IPR002155 Thiolase JE55_RS00605 IPR016039 Thiolase-like JE55_RS00605 IPR020613 Thiolase, conserved site JE55_RS00605 IPR020615 Thiolase, acyl-enzyme intermediate active site JE55_RS00605 IPR020616 Thiolase, N-terminal JE55_RS00605 IPR020617 Thiolase, C-terminal JE55_RS00610 IPR000868 Isochorismatase-like JE55_RS00615 IPR001753 Crotonase superfamily JE55_RS00615 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal JE55_RS00615 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding JE55_RS00615 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS00615 IPR013328 Dehydrogenase, multihelical JE55_RS00615 IPR016040 NAD(P)-binding domain JE55_RS00615 IPR029045 ClpP/crotonase-like domain JE55_RS00620 IPR000873 AMP-dependent synthetase/ligase JE55_RS00620 IPR020845 AMP-binding, conserved site JE55_RS00620 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS00625 IPR003846 Uncharacterised protein family UPF0061 JE55_RS00630 IPR002579 Peptide methionine sulphoxide reductase MrsB JE55_RS00630 IPR011057 Mss4-like JE55_RS00630 IPR028427 Peptide methionine sulfoxide reductase JE55_RS00635 IPR006008 Intracellular septation protein A JE55_RS00640 IPR002634 BolA protein JE55_RS00645 IPR027304 Trigger factor/SurA domain JE55_RS00650 IPR016181 Acyl-CoA N-acyltransferase JE55_RS00655 IPR010073 Phosphoribosylformylglycinamidine synthase JE55_RS00655 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS00655 IPR016188 PurM, N-terminal-like JE55_RS00655 IPR029062 Class I glutamine amidotransferase-like JE55_RS00665 IPR006076 FAD dependent oxidoreductase JE55_RS00665 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS00670 IPR000631 YjeF C-terminal domain JE55_RS00670 IPR004443 YjeF N-terminal domain JE55_RS00670 IPR029056 Ribokinase-like JE55_RS00670 IPR030677 JE55_RS00670 JE55_RS00675 IPR001672 Phosphoglucose isomerase (PGI) JE55_RS00675 IPR018189 Phosphoglucose isomerase, conserved site JE55_RS00675 IPR023096 Phosphoglucose isomerase, C-terminal JE55_RS00680 IPR003439 ABC transporter-like JE55_RS00680 IPR003593 AAA+ ATPase domain JE55_RS00680 IPR017871 ABC transporter, conserved site JE55_RS00680 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00685 IPR013830 JE55_RS00685 JE55_RS00690 IPR027304 Trigger factor/SurA domain JE55_RS00700 IPR029032 AhpD-like JE55_RS00720 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein JE55_RS00730 IPR003111 Peptidase S16, lon N-terminal JE55_RS00730 IPR003593 AAA+ ATPase domain JE55_RS00730 IPR003959 ATPase, AAA-type, core JE55_RS00730 IPR004815 Lon protease, bacterial/eukaryotic-type JE55_RS00730 IPR008268 Peptidase S16, active site JE55_RS00730 IPR008269 Peptidase S16, Lon C-terminal JE55_RS00730 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS00730 IPR015947 PUA-like domain JE55_RS00730 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS00730 IPR027065 Lon protease JE55_RS00730 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00730 IPR027543 Lon protease, bacterial JE55_RS00735 IPR003593 AAA+ ATPase domain JE55_RS00735 IPR003959 ATPase, AAA-type, core JE55_RS00735 IPR004487 Clp protease, ATP-binding subunit ClpX JE55_RS00735 IPR010603 Zinc finger, ClpX C4-type JE55_RS00735 IPR019489 Clp ATPase, C-terminal JE55_RS00735 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00740 IPR001907 ATP-dependent Clp protease proteolytic subunit JE55_RS00740 IPR018215 ClpP, active site JE55_RS00740 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JE55_RS00740 IPR029045 ClpP/crotonase-like domain JE55_RS00740 IPR033135 JE55_RS00740 JE55_RS00745 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain JE55_RS00745 IPR005215 Trigger factor JE55_RS00745 IPR008880 Trigger factor, C-terminal domain JE55_RS00745 IPR008881 Trigger factor, ribosome-binding, bacterial JE55_RS00745 IPR027304 Trigger factor/SurA domain JE55_RS00750 IPR004381 Glycerate kinase JE55_RS00750 IPR018193 Glycerate kinase, flavodoxin-like domain JE55_RS00755 IPR000835 MarR-type HTH domain JE55_RS00755 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00755 IPR023187 Transcriptional regulator MarR-type, conserved site JE55_RS00760 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS00760 IPR013328 Dehydrogenase, multihelical JE55_RS00760 IPR013332 Ketopantoate reductase, N-terminal domain JE55_RS00760 IPR013752 Ketopantoate reductase, C-terminal domain JE55_RS00760 IPR016040 NAD(P)-binding domain JE55_RS00765 IPR000792 Transcription regulator LuxR, C-terminal JE55_RS00765 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00765 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS00770 IPR002299 Porin, Neisseria sp. type JE55_RS00770 IPR023614 Porin domain JE55_RS00775 IPR011701 Major facilitator superfamily JE55_RS00775 IPR020846 Major facilitator superfamily domain JE55_RS00780 IPR000286 Histone deacetylase superfamily JE55_RS00780 IPR023801 Histone deacetylase domain JE55_RS00785 IPR001736 Phospholipase D/Transphosphatidylase JE55_RS00785 IPR025202 Phospholipase D-like domain JE55_RS00795 IPR028969 Immunity protein 32 JE55_RS00805 IPR008727 PAAR motif JE55_RS00810 IPR025391 Domain of unknown function DUF4123 JE55_RS00825 IPR016929 Uncharacterised conserved protein UCP029636 JE55_RS00825 IPR028969 Immunity protein 32 JE55_RS00835 IPR002060 Squalene/phytoene synthase JE55_RS00835 IPR008949 Terpenoid synthase JE55_RS00835 IPR017828 Squalene/phytoene synthase HpnD JE55_RS00840 IPR010869 Protein of unknown function DUF1501 JE55_RS00845 IPR014917 Protein of unknown function DUF1800 JE55_RS00855 IPR001789 Signal transduction response regulator, receiver domain JE55_RS00855 IPR001867 Signal transduction response regulator, C-terminal JE55_RS00855 IPR011006 CheY-like superfamily JE55_RS00855 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00855 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS00860 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS00860 IPR003660 HAMP linker domain JE55_RS00860 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS00860 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS00860 IPR032408 JE55_RS00860 JE55_RS00865 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JE55_RS00865 IPR012336 Thioredoxin-like fold JE55_RS00865 IPR024706 Peroxiredoxin, AhpC-type JE55_RS00870 IPR003779 Carboxymuconolactone decarboxylase-like JE55_RS00870 IPR004674 Alkylhydroperoxidase AhpD JE55_RS00870 IPR004675 Alkylhydroperoxidase AhpD core JE55_RS00870 IPR029032 AhpD-like JE55_RS00875 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase JE55_RS00875 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site JE55_RS00880 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JE55_RS00880 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site JE55_RS00880 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS00885 IPR001650 Helicase, C-terminal JE55_RS00885 IPR003711 CarD-like/TRCF domain JE55_RS00885 IPR004576 Transcription-repair coupling factor JE55_RS00885 IPR005118 Transcription-repair-coupling factor, C-terminal domain JE55_RS00885 IPR011545 DEAD/DEAH box helicase domain JE55_RS00885 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JE55_RS00885 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00900 IPR002933 Peptidase M20 JE55_RS00900 IPR010169 Acetylornithine deacetylase (ArgE) JE55_RS00900 IPR011650 Peptidase M20, dimerisation domain JE55_RS00905 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site JE55_RS00905 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS00910 IPR021957 Protein of unknown function DUF3574 JE55_RS00920 IPR001264 Glycosyl transferase, family 51 JE55_RS00920 IPR001460 Penicillin-binding protein, transpeptidase JE55_RS00920 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS00920 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00920 IPR023346 Lysozyme-like domain JE55_RS00920 IPR031376 JE55_RS00920 JE55_RS00925 IPR007157 PspA/IM30 JE55_RS00930 IPR011990 Tetratricopeptide-like helical domain JE55_RS00935 IPR001185 Large-conductance mechanosensitive channel JE55_RS00935 IPR019823 Large-conductance mechanosensitive channel, conserved site JE55_RS00945 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding JE55_RS00945 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS00945 IPR013328 Dehydrogenase, multihelical JE55_RS00945 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type JE55_RS00945 IPR016040 NAD(P)-binding domain JE55_RS00945 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain JE55_RS00950 IPR009923 Dodecin JE55_RS00950 IPR025543 Dodecin-like JE55_RS00955 IPR000847 Transcription regulator HTH, LysR JE55_RS00955 IPR005119 LysR, substrate-binding JE55_RS00955 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00960 IPR006680 Amidohydrolase 1 JE55_RS00960 IPR011059 Metal-dependent hydrolase, composite domain JE55_RS00960 IPR032466 JE55_RS00960 JE55_RS00965 IPR000895 Transthyretin/hydroxyisourate hydrolase JE55_RS00965 IPR014306 Hydroxyisourate hydrolase JE55_RS00965 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily JE55_RS00965 IPR023419 Transthyretin, conserved site JE55_RS00970 IPR009056 Cytochrome c-like domain JE55_RS00970 IPR010389 Protein of unknown function DUF989 JE55_RS00975 IPR007247 Ureidoglycolate hydrolase JE55_RS00975 IPR011051 RmlC-like cupin domain JE55_RS00975 IPR023525 Ureidoglycolate hydrolase, bacterial JE55_RS00975 IPR024060 Ureidoglycolate hydrolase domain JE55_RS00980 IPR005164 Allantoicase JE55_RS00980 IPR008979 Galactose-binding domain-like JE55_RS00980 IPR015908 Allantoicase domain JE55_RS00985 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 JE55_RS00985 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase JE55_RS00990 IPR002509 Polysaccharide deacetylase JE55_RS00990 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JE55_RS00990 IPR017625 Putative urate catabolism protein JE55_RS00995 IPR001920 Asp/Glu racemase JE55_RS00995 IPR015942 Asp/Glu/hydantoin racemase JE55_RS01000 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin JE55_RS01005 IPR000524 Transcription regulator HTH, GntR JE55_RS01005 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS01005 IPR011711 GntR, C-terminal JE55_RS01005 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS01010 IPR003507 Muramoyl-tetrapeptide carboxypeptidase JE55_RS01010 IPR027461 LD-carboxypeptidase A, C-terminal domain JE55_RS01010 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain JE55_RS01010 IPR029062 Class I glutamine amidotransferase-like JE55_RS01015 IPR016192 APOBEC/CMP deaminase, zinc-binding JE55_RS01015 IPR016193 Cytidine deaminase-like JE55_RS01015 IPR028883 tRNA-specific adenosine deaminase JE55_RS01020 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain JE55_RS01025 IPR018531 Domain of unknown function DUF1993 JE55_RS01025 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase JE55_RS01030 IPR011701 Major facilitator superfamily JE55_RS01030 IPR020846 Major facilitator superfamily domain JE55_RS01035 IPR001674 GMP synthase, C-terminal JE55_RS01035 IPR004739 GMP synthase, N-terminal JE55_RS01035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01035 IPR017926 Glutamine amidotransferase JE55_RS01035 IPR022310 NAD/GMP synthase JE55_RS01035 IPR022955 GMP synthase JE55_RS01035 IPR029062 Class I glutamine amidotransferase-like JE55_RS01045 IPR000644 CBS domain JE55_RS01045 IPR001093 IMP dehydrogenase/GMP reductase JE55_RS01045 IPR005990 Inosine-5'-monophosphate dehydrogenase JE55_RS01045 IPR013785 Aldolase-type TIM barrel JE55_RS01045 IPR015875 IMP dehydrogenase / GMP reductase, conserved site JE55_RS01050 IPR010296 Protein of unknown function DUF899, thioredoxin-like JE55_RS01050 IPR012336 Thioredoxin-like fold JE55_RS01055 IPR011990 Tetratricopeptide-like helical domain JE55_RS01055 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS01060 IPR002372 Pyrrolo-quinoline quinone repeat JE55_RS01060 IPR015943 WD40/YVTN repeat-like-containing domain JE55_RS01065 IPR000620 Drug/metabolite transporter JE55_RS01070 IPR005346 RnfH protein JE55_RS01070 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JE55_RS01075 IPR005031 Streptomyces cyclase/dehydrase JE55_RS01075 IPR023393 START-like domain JE55_RS01080 IPR000037 SsrA-binding protein JE55_RS01080 IPR020081 SsrA-binding protein, conserved site JE55_RS01080 IPR023620 Small protein B JE55_RS01085 IPR001107 Band 7 protein JE55_RS01085 IPR001972 Stomatin family JE55_RS01085 IPR032435 JE55_RS01085 JE55_RS01090 IPR002810 NfeD-like, C-terminal domain JE55_RS01095 IPR000121 PEP-utilising enzyme, C-terminal JE55_RS01095 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding JE55_RS01095 IPR006319 Phosphoenolpyruvate synthase JE55_RS01095 IPR008279 PEP-utilising enzyme, mobile domain JE55_RS01095 IPR013815 ATP-grasp fold, subdomain 1 JE55_RS01095 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS01095 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JE55_RS01095 IPR018274 PEP-utilising enzyme, active site JE55_RS01095 IPR023151 PEP-utilising enzyme, conserved site JE55_RS01100 IPR007719 Phytochelatin synthase JE55_RS01110 IPR000209 Peptidase S8/S53 domain JE55_RS01110 IPR009020 Proteinase inhibitor, propeptide JE55_RS01110 IPR015366 Peptidase S53, propeptide JE55_RS01110 IPR023828 Peptidase S8, subtilisin, Ser-active site JE55_RS01115 IPR005177 Bifunctional kinase-pyrophosphorylase JE55_RS01115 IPR026530 Phosphoenolpyruvate synthase regulatory protein JE55_RS01120 IPR001537 tRNA/rRNA methyltransferase, SpoU type JE55_RS01120 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS01120 IPR029028 Alpha/beta knot methyltransferases JE55_RS01120 IPR029064 50S ribosomal protein L30e-like JE55_RS01125 IPR001352 Ribonuclease HII/HIII JE55_RS01125 IPR012337 Ribonuclease H-like domain JE55_RS01125 IPR022898 Ribonuclease HII JE55_RS01125 IPR024567 Ribonuclease HII/HIII domain JE55_RS01130 IPR003835 Glycosyl transferase, family 19 JE55_RS01135 IPR001451 Bacterial transferase hexapeptide repeat JE55_RS01135 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase JE55_RS01135 IPR011004 Trimeric LpxA-like JE55_RS01135 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal JE55_RS01140 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ JE55_RS01140 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ JE55_RS01140 IPR029069 HotDog domain JE55_RS01145 IPR001451 Bacterial transferase hexapeptide repeat JE55_RS01145 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase JE55_RS01145 IPR011004 Trimeric LpxA-like JE55_RS01145 IPR018357 Hexapeptide transferase, conserved site JE55_RS01145 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region JE55_RS01150 IPR005632 Chaperone protein Skp JE55_RS01150 IPR024930 Skp domain JE55_RS01155 IPR000184 Bacterial surface antigen (D15) JE55_RS01155 IPR010827 Surface antigen variable number JE55_RS01155 IPR023707 Outer membrane protein assembly factor BamA JE55_RS01160 IPR001478 PDZ domain JE55_RS01160 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase JE55_RS01160 IPR008915 Peptidase M50 JE55_RS01165 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase JE55_RS01165 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal JE55_RS01165 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal JE55_RS01165 IPR016040 NAD(P)-binding domain JE55_RS01165 IPR026877 DXP reductoisomerase C-terminal domain JE55_RS01170 IPR000374 Phosphatidate cytidylyltransferase JE55_RS01175 IPR001441 Decaprenyl diphosphate synthase-like JE55_RS01175 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site JE55_RS01180 IPR002661 Ribosome recycling factor JE55_RS01180 IPR023584 Ribosome recycling factor domain JE55_RS01185 IPR001048 Aspartate/glutamate/uridylate kinase JE55_RS01185 IPR011817 Uridylate kinase JE55_RS01185 IPR015963 Uridylate kinase, bacteria JE55_RS01190 IPR001816 Translation elongation factor EFTs/EF1B JE55_RS01190 IPR009060 UBA-like JE55_RS01190 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation JE55_RS01190 IPR018101 Translation elongation factor Ts, conserved site JE55_RS01195 IPR001865 Ribosomal protein S2 JE55_RS01195 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid JE55_RS01195 IPR018130 Ribosomal protein S2, conserved site JE55_RS01195 IPR023591 Ribosomal protein S2, flavodoxin-like domain JE55_RS01205 IPR000994 Peptidase M24, structural domain JE55_RS01205 IPR001714 Peptidase M24, methionine aminopeptidase JE55_RS01205 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 JE55_RS01210 IPR002934 Nucleotidyl transferase domain JE55_RS01210 IPR003607 HD/PDEase domain JE55_RS01210 IPR006674 HD domain JE55_RS01210 IPR010043 Protein-PII uridylyltransferase JE55_RS01210 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase JE55_RS01215 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JE55_RS01215 IPR002942 RNA-binding S4 domain JE55_RS01215 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JE55_RS01215 IPR020103 Pseudouridine synthase, catalytic domain JE55_RS01220 IPR000181 Formylmethionine deformylase JE55_RS01220 IPR023635 Peptide deformylase JE55_RS01225 IPR001357 BRCT domain JE55_RS01225 IPR001679 NAD-dependent DNA ligase JE55_RS01225 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JE55_RS01225 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type JE55_RS01225 IPR004150 NAD-dependent DNA ligase, OB-fold JE55_RS01225 IPR010994 RuvA domain 2-like JE55_RS01225 IPR012340 Nucleic acid-binding, OB-fold JE55_RS01225 IPR013839 NAD-dependent DNA ligase, adenylation JE55_RS01225 IPR013840 NAD-dependent DNA ligase, N-terminal JE55_RS01225 IPR018239 NAD-dependent DNA ligase, active site JE55_RS01225 IPR033136 JE55_RS01225 JE55_RS01235 IPR007449 ZipA, C-terminal FtsZ-binding domain JE55_RS01240 IPR003395 RecF/RecN/SMC, N-terminal JE55_RS01240 IPR010935 SMCs flexible hinge JE55_RS01240 IPR011890 Structural maintenance of chromosomes protein, prokaryotic JE55_RS01240 IPR024704 Structural maintenance of chromosomes protein JE55_RS01240 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01245 IPR000620 Drug/metabolite transporter JE55_RS01250 IPR004839 Aminotransferase, class I/classII JE55_RS01250 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS01250 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS01250 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS01250 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria JE55_RS01255 IPR001451 Bacterial transferase hexapeptide repeat JE55_RS01255 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family JE55_RS01255 IPR011004 Trimeric LpxA-like JE55_RS01255 IPR018357 Hexapeptide transferase, conserved site JE55_RS01255 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 JE55_RS01260 IPR006504 Transcriptional regulator Spx/MgsR JE55_RS01260 IPR006660 Arsenate reductase-like JE55_RS01260 IPR012336 Thioredoxin-like fold JE55_RS01265 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JE55_RS01265 IPR002933 Peptidase M20 JE55_RS01265 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria JE55_RS01265 IPR011650 Peptidase M20, dimerisation domain JE55_RS01270 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JE55_RS01270 IPR004556 Modification methylase HemK JE55_RS01270 IPR007848 Methyltransferase small domain JE55_RS01270 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase JE55_RS01270 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS01280 IPR001736 Phospholipase D/Transphosphatidylase JE55_RS01280 IPR022924 Cardiolipin synthase JE55_RS01280 IPR025202 Phospholipase D-like domain JE55_RS01280 IPR027379 Cardiolipin synthase N-terminal JE55_RS01280 IPR030840 JE55_RS01280 JE55_RS01285 IPR000889 Glutathione peroxidase JE55_RS01285 IPR012336 Thioredoxin-like fold JE55_RS01285 IPR029759 Glutathione peroxidase active site JE55_RS01285 IPR029760 Glutathione peroxidase conserved site JE55_RS01290 IPR003439 ABC transporter-like JE55_RS01290 IPR003593 AAA+ ATPase domain JE55_RS01290 IPR017871 ABC transporter, conserved site JE55_RS01290 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01290 IPR032524 JE55_RS01290 JE55_RS01290 IPR032781 JE55_RS01290 JE55_RS01295 IPR021294 Protein of unknown function DUF2866 JE55_RS01300 IPR003593 AAA+ ATPase domain JE55_RS01300 IPR004504 DNA repair protein RadA JE55_RS01300 IPR008269 Peptidase S16, Lon C-terminal JE55_RS01300 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS01300 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS01300 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01305 IPR000821 Alanine racemase JE55_RS01305 IPR001608 Alanine racemase, N-terminal JE55_RS01305 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JE55_RS01305 IPR011079 Alanine racemase, C-terminal JE55_RS01305 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site JE55_RS01305 IPR029066 PLP-binding barrel JE55_RS01310 IPR011701 Major facilitator superfamily JE55_RS01310 IPR020846 Major facilitator superfamily domain JE55_RS01315 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase JE55_RS01315 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase JE55_RS01315 IPR029056 Ribokinase-like JE55_RS01325 IPR015003 Protein of unknown function DUF1853 JE55_RS01330 IPR005122 Uracil-DNA glycosylase-like JE55_RS01330 IPR005273 Uracil-DNA glycosylase, family 4 domain JE55_RS01335 IPR000182 GNAT domain JE55_RS01335 IPR006464 Ribosomal-protein-alanine acetyltransferase JE55_RS01335 IPR016181 Acyl-CoA N-acyltransferase JE55_RS01340 IPR000905 Gcp-like domain JE55_RS01340 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ JE55_RS01345 IPR000582 Acyl-CoA-binding protein, ACBP JE55_RS01345 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle JE55_RS01350 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site JE55_RS01350 IPR001650 Helicase, C-terminal JE55_RS01350 IPR011545 DEAD/DEAH box helicase domain JE55_RS01350 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JE55_RS01350 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01355 IPR006254 Isocitrate lyase JE55_RS01355 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JE55_RS01355 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site JE55_RS01360 IPR006015 Universal stress protein A JE55_RS01360 IPR006016 UspA JE55_RS01360 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01365 IPR000847 Transcription regulator HTH, LysR JE55_RS01365 IPR005119 LysR, substrate-binding JE55_RS01365 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS01370 IPR006328 Haloacid dehalogenase, type II JE55_RS01370 IPR006439 HAD hydrolase, subfamily IA JE55_RS01370 IPR023198 Phosphoglycolate phosphatase, domain 2 JE55_RS01370 IPR023214 HAD-like domain JE55_RS01375 IPR001465 Malate synthase JE55_RS01375 IPR006252 Malate synthase A JE55_RS01375 IPR011076 Malate synthase-like JE55_RS01375 IPR019830 Malate synthase, conserved site JE55_RS01380 IPR009288 AIG2-like JE55_RS01380 IPR013024 Butirosin biosynthesis, BtrG-like JE55_RS01385 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase JE55_RS01385 IPR010203 Regulator of ribonuclease activity A JE55_RS01390 IPR003313 AraC-type arabinose-binding/dimerisation domain JE55_RS01390 IPR009057 Homeodomain-like JE55_RS01390 IPR011051 RmlC-like cupin domain JE55_RS01390 IPR014710 RmlC-like jelly roll fold JE55_RS01390 IPR018060 DNA binding HTH domain, AraC-type JE55_RS01390 IPR020449 Transcription regulator HTH, AraC- type JE55_RS01400 IPR000182 GNAT domain JE55_RS01400 IPR016181 Acyl-CoA N-acyltransferase JE55_RS01430 IPR000924 Glutamyl/glutaminyl-tRNA synthetase JE55_RS01430 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JE55_RS01430 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial JE55_RS01430 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding JE55_RS01430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01430 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain JE55_RS01430 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain JE55_RS01430 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 JE55_RS01435 IPR002641 Patatin/Phospholipase A2-related JE55_RS01435 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JE55_RS01440 IPR000064 Endopeptidase, NLPC/P60 domain JE55_RS01445 IPR003439 ABC transporter-like JE55_RS01445 IPR003593 AAA+ ATPase domain JE55_RS01445 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JE55_RS01445 IPR017871 ABC transporter, conserved site JE55_RS01445 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01450 IPR000515 MetI-like domain JE55_RS01455 IPR000515 MetI-like domain JE55_RS01460 IPR000914 Bacterial extracellular solute-binding protein, family 5 JE55_RS01460 IPR030678 JE55_RS01460 JE55_RS01465 IPR002347 Glucose/ribitol dehydrogenase JE55_RS01465 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) JE55_RS01465 IPR016040 NAD(P)-binding domain JE55_RS01470 IPR024446 JE55_RS01470 JE55_RS01480 IPR006656 Molybdopterin oxidoreductase JE55_RS01480 IPR006657 Molydopterin dinucleotide-binding domain JE55_RS01480 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain JE55_RS01480 IPR009010 Aspartate decarboxylase-like domain JE55_RS01490 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase JE55_RS01490 IPR008333 Oxidoreductase, FAD-binding domain JE55_RS01490 IPR017938 Riboflavin synthase-like beta-barrel JE55_RS01495 IPR006638 Elongator protein 3/MiaB/NifB JE55_RS01495 IPR007197 Radical SAM JE55_RS01495 IPR010505 Molybdenum cofactor synthesis C-terminal JE55_RS01495 IPR013483 Molybdenum cofactor biosynthesis protein A JE55_RS01495 IPR013785 Aldolase-type TIM barrel JE55_RS01500 IPR000813 7Fe ferredoxin JE55_RS01500 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS01500 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS01500 IPR022569 Ferredoxin, C-terminal JE55_RS01505 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS01505 IPR009057 Homeodomain-like JE55_RS01505 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS01505 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS01510 IPR000994 Peptidase M24, structural domain JE55_RS01510 IPR001714 Peptidase M24, methionine aminopeptidase JE55_RS01510 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 JE55_RS01515 IPR021831 Protein of unknown function DUF3423 JE55_RS01520 IPR000362 Fumarate lyase family JE55_RS01520 IPR008948 L-Aspartase-like JE55_RS01520 IPR009049 Argininosuccinate lyase JE55_RS01520 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS01520 IPR022761 Fumarate lyase, N-terminal JE55_RS01520 IPR029419 Argininosuccinate lyase, C-terminal JE55_RS01525 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS01530 IPR006204 GHMP kinase N-terminal domain JE55_RS01530 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS01530 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS01535 IPR002500 Phosphoadenosine phosphosulphate reductase JE55_RS01535 IPR011784 Sulphate adenylyltransferase, small subunit JE55_RS01535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01540 IPR019290 Glycosyltransferase 2-like, prokaryotic type JE55_RS01540 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS01545 IPR000192 Aminotransferase class V domain JE55_RS01545 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS01545 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS01545 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS01545 IPR022278 Phosphoserine aminotransferase JE55_RS01550 IPR002656 Acyltransferase 3 JE55_RS01555 IPR016040 NAD(P)-binding domain JE55_RS01560 IPR005475 Transketolase-like, pyrimidine-binding domain JE55_RS01560 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II JE55_RS01560 IPR029061 Thiamin diphosphate-binding fold JE55_RS01560 IPR033247 JE55_RS01560 JE55_RS01560 IPR033412 JE55_RS01560 JE55_RS01565 IPR005474 Transketolase, N-terminal JE55_RS01565 IPR029061 Thiamin diphosphate-binding fold JE55_RS01565 IPR033247 JE55_RS01565 JE55_RS01570 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01575 IPR029465 TupA-like ATPgrasp protein JE55_RS01580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS01585 IPR003819 Taurine catabolism dioxygenase TauD/TfdA JE55_RS01590 IPR005331 Sulfotransferase JE55_RS01590 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01595 IPR000873 AMP-dependent synthetase/ligase JE55_RS01595 IPR001242 Condensation domain JE55_RS01595 IPR006162 Phosphopantetheine attachment site JE55_RS01595 IPR009081 Acyl carrier protein-like JE55_RS01595 IPR010060 Non-ribosomal peptide synthase JE55_RS01595 IPR010071 Amino acid adenylation domain JE55_RS01595 IPR020806 Polyketide synthase, phosphopantetheine-binding domain JE55_RS01595 IPR020845 AMP-binding, conserved site JE55_RS01595 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS01595 IPR029058 Alpha/Beta hydrolase fold JE55_RS01600 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS01605 IPR010290 Transmembrane secretion effector JE55_RS01605 IPR020846 Major facilitator superfamily domain JE55_RS01610 IPR000873 AMP-dependent synthetase/ligase JE55_RS01610 IPR006162 Phosphopantetheine attachment site JE55_RS01610 IPR009081 Acyl carrier protein-like JE55_RS01610 IPR010071 Amino acid adenylation domain JE55_RS01610 IPR020806 Polyketide synthase, phosphopantetheine-binding domain JE55_RS01610 IPR020845 AMP-binding, conserved site JE55_RS01610 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS01615 IPR002891 Adenylylsulphate kinase JE55_RS01615 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01615 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS01625 IPR006143 RND efflux pump, membrane fusion protein JE55_RS01625 IPR022824 Multidrug resistance protein MdtA JE55_RS01630 IPR001036 Acriflavin resistance protein JE55_RS01630 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS01635 IPR020846 Major facilitator superfamily domain JE55_RS01640 IPR005546 Autotransporter beta-domain JE55_RS01640 IPR013830 JE55_RS01640 JE55_RS01660 IPR001048 Aspartate/glutamate/uridylate kinase JE55_RS01660 IPR001057 Glutamate/acetylglutamate kinase JE55_RS01660 IPR001341 Aspartate kinase domain JE55_RS01660 IPR002912 ACT domain JE55_RS01660 IPR005260 Aspartate kinase, monofunctional class JE55_RS01660 IPR018042 Aspartate kinase, conserved site JE55_RS01660 IPR027795 GATS-like ACT domain JE55_RS01665 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase JE55_RS01665 IPR012094 Lysidine-tRNA(Ile) synthetase JE55_RS01665 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal JE55_RS01665 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal JE55_RS01665 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01665 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain JE55_RS01665 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 JE55_RS01670 IPR001095 Acetyl-CoA carboxylase, alpha subunit JE55_RS01670 IPR029045 ClpP/crotonase-like domain JE55_RS01675 IPR003265 HhH-GPD domain JE55_RS01675 IPR011257 DNA glycosylase JE55_RS01675 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JE55_RS01680 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JE55_RS01680 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01680 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR JE55_RS01680 IPR015803 Cysteine-tRNA ligase JE55_RS01680 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase JE55_RS01680 IPR032678 JE55_RS01680 JE55_RS01685 IPR011990 Tetratricopeptide-like helical domain JE55_RS01685 IPR019734 Tetratricopeptide repeat JE55_RS01690 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain JE55_RS01690 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site JE55_RS01690 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase JE55_RS01690 IPR029000 Cyclophilin-like domain JE55_RS01695 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain JE55_RS01695 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site JE55_RS01695 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase JE55_RS01695 IPR029000 Cyclophilin-like domain JE55_RS01700 IPR004843 Calcineurin-like phosphoesterase domain, apaH type JE55_RS01700 IPR010138 UDP-2,3-diacylglucosamine hydrolase JE55_RS01700 IPR029052 Metallo-dependent phosphatase-like JE55_RS01705 IPR001451 Bacterial transferase hexapeptide repeat JE55_RS01705 IPR005881 Serine O-acetyltransferase JE55_RS01705 IPR011004 Trimeric LpxA-like JE55_RS01710 IPR001537 tRNA/rRNA methyltransferase, SpoU type JE55_RS01710 IPR004384 RNA methyltransferase TrmH, group 1 JE55_RS01710 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS01710 IPR029028 Alpha/beta knot methyltransferases JE55_RS01715 IPR000760 Inositol monophosphatase JE55_RS01715 IPR020550 Inositol monophosphatase, conserved site JE55_RS01715 IPR020583 Inositol monophosphatase, metal-binding site JE55_RS01715 IPR022337 Inositol monophosphatase, SuhB JE55_RS01730 IPR002716 PIN domain JE55_RS01730 IPR029060 PIN domain-like JE55_RS01735 IPR010093 Excisionase/Xis, DNA-binding JE55_RS01745 IPR008727 PAAR motif JE55_RS01750 IPR025391 Domain of unknown function DUF4123 JE55_RS01760 IPR028904 Tox-REase-5 domain JE55_RS01765 IPR016929 Uncharacterised conserved protein UCP029636 JE55_RS01765 IPR028969 Immunity protein 32 JE55_RS01770 IPR012263 Adenine modification methylase, M.EcoRV-type JE55_RS01770 IPR012327 D12 class N6 adenine-specific DNA methyltransferase JE55_RS01770 IPR023095 Adenine-specific methyltransferase, domain 2 JE55_RS01770 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS01775 IPR004929 Bacteriophage Rz lysis protein JE55_RS01780 IPR002196 Glycoside hydrolase, family 24 JE55_RS01780 IPR023346 Lysozyme-like domain JE55_RS01780 IPR023347 Lysozyme domain JE55_RS01795 IPR008861 Bacteriophage P2, GpX JE55_RS01800 IPR009734 Myoviridae, GpU JE55_RS01805 IPR010090 Phage tail tape measure protein JE55_RS01810 IPR019289 Bacteriophage tail protein Gp41, putative JE55_RS01815 IPR006498 Bacteriophage P2, FII, major tail tube protein JE55_RS01820 IPR007067 Tail sheath protein JE55_RS01825 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly JE55_RS01835 IPR006521 Tail protein I JE55_RS01840 IPR006949 Baseplate assembly protein J-like, predicted JE55_RS01840 IPR014507 Baseplate assembly protein J, predicted JE55_RS01845 IPR007048 GpW/Gp25/anti-adapter protein IraD JE55_RS01855 IPR006531 Gp5 N-terminal JE55_RS01855 IPR013046 Bacteriophage Mu/P2, baseplate assembly JE55_RS01865 IPR010633 Bacteriophage lambda, GpZ, minor tail JE55_RS01870 IPR008018 Bacteriophage tail attachment protein FII JE55_RS01875 IPR005564 Major head protein GpE JE55_RS01880 IPR004195 Head decoration protein D JE55_RS01885 IPR001907 ATP-dependent Clp protease proteolytic subunit JE55_RS01885 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JE55_RS01885 IPR029045 ClpP/crotonase-like domain JE55_RS01890 IPR006429 Bacteriophage lambda, GpB, portal JE55_RS01900 IPR008866 Bacteriophage lambda, GpA JE55_RS01920 IPR001305 Heat shock protein DnaJ, cysteine-rich domain JE55_RS01925 IPR007936 Virulence-associated E JE55_RS01965 IPR003115 ParB/Sulfiredoxin JE55_RS01980 IPR002104 Integrase, catalytic JE55_RS01980 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS01980 IPR013762 Integrase-like, catalytic core JE55_RS01980 IPR023109 Integrase/recombinase, N-terminal JE55_RS01980 IPR025166 Domain of unknown function DUF4102 JE55_RS01985 IPR000432 DNA mismatch repair protein MutS, C-terminal JE55_RS01985 IPR005748 DNA mismatch repair protein MutS, type 1 JE55_RS01985 IPR007695 DNA mismatch repair protein MutS-like, N-terminal JE55_RS01985 IPR007696 DNA mismatch repair protein MutS, core JE55_RS01985 IPR007860 DNA mismatch repair protein MutS, connector domain JE55_RS01985 IPR007861 DNA mismatch repair protein MutS, clamp JE55_RS01985 IPR016151 DNA mismatch repair protein MutS, N-terminal JE55_RS01985 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01995 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type JE55_RS02000 IPR003347 JmjC domain JE55_RS02005 IPR001279 Beta-lactamase-like JE55_RS02010 IPR010653 Lipoprotein, NlpB JE55_RS02015 IPR002220 DapA-like JE55_RS02015 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA JE55_RS02015 IPR013785 Aldolase-type TIM barrel JE55_RS02015 IPR020625 Dihydrodipicolinate synthetase, active site JE55_RS02020 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS02025 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JE55_RS02025 IPR002305 Aminoacyl-tRNA synthetase, class Ic JE55_RS02025 IPR002306 Tryptophan-tRNA ligase JE55_RS02025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS02025 IPR024109 Tryptophan-tRNA ligase, bacterial-type JE55_RS02035 IPR006070 YrdC-like domain JE55_RS02035 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS02040 IPR003141 Polymerase/histidinol phosphatase, N-terminal JE55_RS02040 IPR004013 PHP, C-terminal JE55_RS02040 IPR016195 Polymerase/histidinol phosphatase-like JE55_RS02045 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS02045 IPR029058 Alpha/Beta hydrolase fold JE55_RS02050 IPR007402 Protein of unknown function DUF455 JE55_RS02050 IPR009078 Ferritin-like superfamily JE55_RS02050 IPR011197 Uncharacterised conserved protein UCP012318 JE55_RS02050 IPR012347 Ferritin-related JE55_RS02055 IPR001451 Bacterial transferase hexapeptide repeat JE55_RS02055 IPR011004 Trimeric LpxA-like JE55_RS02060 IPR000397 Heat shock protein Hsp33 JE55_RS02060 IPR016153 Heat shock protein Hsp33, N-terminal JE55_RS02060 IPR016154 Heat shock protein Hsp33, C-terminal JE55_RS02060 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain JE55_RS02070 IPR007060 Septum formation initiator FtsL/DivIC JE55_RS02070 IPR023081 Cell division protein FtsB JE55_RS02075 IPR000941 Enolase JE55_RS02075 IPR020809 Enolase, conserved site JE55_RS02075 IPR020810 Enolase, C-terminal JE55_RS02075 IPR020811 Enolase, N-terminal JE55_RS02075 IPR029017 Enolase N-terminal domain-like JE55_RS02075 IPR029065 Enolase C-terminal domain-like JE55_RS02080 IPR006218 DAHP synthetase I/KDSA JE55_RS02080 IPR006269 3-deoxy-8-phosphooctulonate synthase JE55_RS02080 IPR013785 Aldolase-type TIM barrel JE55_RS02085 IPR004468 CTP synthase JE55_RS02085 IPR017456 CTP synthase, N-terminal JE55_RS02085 IPR017926 Glutamine amidotransferase JE55_RS02085 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02085 IPR029062 Class I glutamine amidotransferase-like JE55_RS02090 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS02090 IPR029058 Alpha/Beta hydrolase fold JE55_RS02095 IPR001279 Beta-lactamase-like JE55_RS02095 IPR004477 ComEC/Rec2-related protein JE55_RS02095 IPR004797 Competence protein ComEC/Rec2 JE55_RS02095 IPR025405 Domain of unknown function DUF4131 JE55_RS02100 IPR001130 TatD family JE55_RS02100 IPR018228 Deoxyribonuclease, TatD-related, conserved site JE55_RS02100 IPR032466 JE55_RS02100 JE55_RS02105 IPR003439 ABC transporter-like JE55_RS02105 IPR003593 AAA+ ATPase domain JE55_RS02105 IPR011924 Lipoprotein releasing system, ATP-binding protein JE55_RS02105 IPR017871 ABC transporter, conserved site JE55_RS02105 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02110 IPR003838 Permease FtsX-like JE55_RS02110 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family JE55_RS02110 IPR025857 MacB-like periplasmic core domain JE55_RS02115 IPR016631 Regulatory, RpfE JE55_RS02120 IPR001667 DDH domain JE55_RS02120 IPR003156 DHHA1 domain JE55_RS02120 IPR004610 Bacterial RecJ exonuclease JE55_RS02125 IPR000352 Peptide chain release factor class I/class II JE55_RS02125 IPR004374 Peptide chain release factor 2 JE55_RS02125 IPR005139 Peptide chain release factor JE55_RS02125 IPR014720 Double-stranded RNA-binding domain JE55_RS02130 IPR002313 Lysine-tRNA ligase, class II JE55_RS02130 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JE55_RS02130 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JE55_RS02130 IPR012340 Nucleic acid-binding, OB-fold JE55_RS02130 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal JE55_RS02130 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like JE55_RS02135 IPR008816 Glycine zipper 2TM domain JE55_RS02140 IPR007479 ISC system FeS cluster assembly, IscX JE55_RS02145 IPR001041 2Fe-2S ferredoxin-type domain JE55_RS02145 IPR001055 Adrenodoxin JE55_RS02145 IPR011536 Ferredoxin, 2Fe-2S type JE55_RS02145 IPR012675 Beta-grasp domain JE55_RS02145 IPR018298 Adrenodoxin, iron-sulphur binding site JE55_RS02150 IPR010236 ISC system FeS cluster assembly, HscA chaperone JE55_RS02150 IPR013126 Heat shock protein 70 family JE55_RS02150 IPR018181 Heat shock protein 70, conserved site JE55_RS02150 IPR029047 Heat shock protein 70kD, peptide-binding domain JE55_RS02150 IPR029048 Heat shock protein 70kD, C-terminal domain JE55_RS02155 IPR001623 DnaJ domain JE55_RS02155 IPR004640 Co-chaperone Hsc20 JE55_RS02155 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain JE55_RS02160 IPR000361 FeS cluster biogenesis JE55_RS02160 IPR011302 ISC system FeS cluster assembly, IscA scaffold JE55_RS02160 IPR016092 FeS cluster insertion protein JE55_RS02160 IPR017870 FeS cluster insertion, C-terminal, conserved site JE55_RS02160 IPR031108 JE55_RS02160 JE55_RS02165 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal JE55_RS02165 IPR011339 ISC system FeS cluster assembly, IscU scaffold JE55_RS02170 IPR000192 Aminotransferase class V domain JE55_RS02170 IPR010240 Cysteine desulfurase JE55_RS02170 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS02170 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS02170 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS02170 IPR016454 Cysteine desulfurase, NifS JE55_RS02170 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site JE55_RS02175 IPR000944 Transcription regulator Rrf2-like JE55_RS02175 IPR010242 Transcription factor HTH, IscR JE55_RS02175 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02180 IPR017867 Protein-tyrosine phosphatase, low molecular weight JE55_RS02180 IPR023485 Phosphotyrosine protein phosphatase I superfamily JE55_RS02190 IPR003741 Domain of unknown function DUF162 JE55_RS02190 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS02190 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS02190 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain JE55_RS02190 IPR024569 4Fe-4S binding protein, C-terminal JE55_RS02195 IPR004017 Cysteine-rich domain JE55_RS02200 IPR005471 Transcription regulator IclR, N-terminal JE55_RS02200 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02200 IPR014757 Transcription regulator IclR, C-terminal JE55_RS02200 IPR029016 GAF domain-like JE55_RS02205 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal JE55_RS02205 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS02205 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A JE55_RS02210 IPR010127 Phasin, subfamily 1 JE55_RS02210 IPR018968 Phasin JE55_RS02215 IPR000089 Biotin/lipoyl attachment JE55_RS02215 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JE55_RS02215 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JE55_RS02215 IPR006258 Dihydrolipoamide dehydrogenase JE55_RS02215 IPR011053 Single hybrid motif JE55_RS02215 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site JE55_RS02215 IPR016156 FAD/NAD-linked reductase, dimerisation domain JE55_RS02215 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS02220 IPR000089 Biotin/lipoyl attachment JE55_RS02220 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain JE55_RS02220 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JE55_RS02220 IPR004167 E3 binding JE55_RS02220 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex JE55_RS02220 IPR011053 Single hybrid motif JE55_RS02220 IPR023213 Chloramphenicol acetyltransferase-like domain JE55_RS02225 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type JE55_RS02225 IPR005474 Transketolase, N-terminal JE55_RS02225 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II JE55_RS02225 IPR029061 Thiamin diphosphate-binding fold JE55_RS02225 IPR033247 JE55_RS02225 JE55_RS02230 IPR000014 PAS domain JE55_RS02230 IPR001610 PAC motif JE55_RS02230 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02230 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS02230 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS02230 IPR013767 PAS fold JE55_RS02235 IPR000792 Transcription regulator LuxR, C-terminal JE55_RS02235 IPR001789 Signal transduction response regulator, receiver domain JE55_RS02235 IPR011006 CheY-like superfamily JE55_RS02235 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02235 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS02240 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase JE55_RS02240 IPR016040 NAD(P)-binding domain JE55_RS02240 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JE55_RS02240 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JE55_RS02240 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site JE55_RS02245 IPR001567 Peptidase M3A/M3B JE55_RS02245 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 JE55_RS02245 IPR024079 Metallopeptidase, catalytic domain JE55_RS02245 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal JE55_RS02250 IPR001126 DNA-repair protein, UmuC-like JE55_RS02250 IPR017961 DNA polymerase, Y-family, little finger domain JE55_RS02250 IPR022880 DNA polymerase IV JE55_RS02250 IPR024728 DNA polymerase type-Y, HhH motif JE55_RS02260 IPR011701 Major facilitator superfamily JE55_RS02260 IPR020846 Major facilitator superfamily domain JE55_RS02265 IPR004737 Nitrate transporter JE55_RS02265 IPR011701 Major facilitator superfamily JE55_RS02265 IPR020846 Major facilitator superfamily domain JE55_RS02270 IPR006468 Nitrate reductase, alpha subunit JE55_RS02270 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site JE55_RS02270 IPR006656 Molybdopterin oxidoreductase JE55_RS02270 IPR006657 Molydopterin dinucleotide-binding domain JE55_RS02270 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain JE55_RS02270 IPR009010 Aspartate decarboxylase-like domain JE55_RS02270 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site JE55_RS02270 IPR028189 Nitrate reductase, alpha subunit, N-terminal JE55_RS02275 IPR006547 Nitrate reductase, beta subunit JE55_RS02275 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS02275 IPR029263 Respiratory nitrate reductase beta, C-terminal JE55_RS02280 IPR003765 Nitrate reductase chaperone, NarJ JE55_RS02280 IPR020945 DMSO/Nitrate reductase chaperone JE55_RS02285 IPR003816 Nitrate reductase, gamma subunit JE55_RS02285 IPR023234 NarG-like domain JE55_RS02290 IPR003018 GAF domain JE55_RS02290 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02290 IPR003660 HAMP linker domain JE55_RS02290 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain JE55_RS02290 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing JE55_RS02290 IPR029016 GAF domain-like JE55_RS02290 IPR029095 NarX-like, N-terminal JE55_RS02295 IPR000792 Transcription regulator LuxR, C-terminal JE55_RS02295 IPR001789 Signal transduction response regulator, receiver domain JE55_RS02295 IPR011006 CheY-like superfamily JE55_RS02295 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02295 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS02300 IPR004808 AP endonuclease 1 JE55_RS02300 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS02300 IPR020848 AP endonuclease 1, conserved site JE55_RS02305 IPR001789 Signal transduction response regulator, receiver domain JE55_RS02305 IPR002078 RNA polymerase sigma factor 54 interaction domain JE55_RS02305 IPR002197 DNA binding HTH domain, Fis-type JE55_RS02305 IPR003593 AAA+ ATPase domain JE55_RS02305 IPR009057 Homeodomain-like JE55_RS02305 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) JE55_RS02305 IPR011006 CheY-like superfamily JE55_RS02305 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JE55_RS02305 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS02305 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS02305 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02310 IPR000014 PAS domain JE55_RS02310 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02310 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS02310 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS02315 IPR001637 Glutamine synthetase class-I, adenylation site JE55_RS02315 IPR004809 Glutamine synthetase type I JE55_RS02315 IPR008146 Glutamine synthetase, catalytic domain JE55_RS02315 IPR008147 Glutamine synthetase, beta-Grasp JE55_RS02315 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JE55_RS02315 IPR027302 Glutamine synthetase, N-terminal conserved site JE55_RS02315 IPR027303 Glutamine synthetase, glycine-rich site JE55_RS02320 IPR001763 Rhodanese-like domain JE55_RS02325 IPR001453 Molybdopterin binding domain JE55_RS02335 IPR006694 Fatty acid hydroxylase JE55_RS02340 IPR011045 Nitrous oxide reductase, N-terminal JE55_RS02340 IPR015943 WD40/YVTN repeat-like-containing domain JE55_RS02340 IPR019405 Lactonase, 7-bladed beta propeller JE55_RS02345 IPR001650 Helicase, C-terminal JE55_RS02345 IPR003593 AAA+ ATPase domain JE55_RS02345 IPR007502 Helicase-associated domain JE55_RS02345 IPR010222 RNA helicase, ATP-dependent DEAH box, HrpA-type JE55_RS02345 IPR011709 Domain of unknown function DUF1605 JE55_RS02345 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JE55_RS02345 IPR024590 RNA helicase, ATP-dependent DEAH box, HrpA, C-terminal JE55_RS02345 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02350 IPR000182 GNAT domain JE55_RS02350 IPR001048 Aspartate/glutamate/uridylate kinase JE55_RS02350 IPR010167 Amino-acid N-acetyltransferase (ArgA) JE55_RS02350 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02355 IPR007457 Fe(II) trafficking protein YggX JE55_RS02360 IPR005828 General substrate transporter JE55_RS02360 IPR020846 Major facilitator superfamily domain JE55_RS02365 IPR003673 CoA-transferase family III JE55_RS02365 IPR023606 CoA-transferase family III domain JE55_RS02370 IPR006089 Acyl-CoA dehydrogenase, conserved site JE55_RS02370 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS02370 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS02370 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS02375 IPR000847 Transcription regulator HTH, LysR JE55_RS02375 IPR005119 LysR, substrate-binding JE55_RS02375 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02385 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JE55_RS02395 IPR005814 Aminotransferase class-III JE55_RS02395 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS02395 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS02395 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS02400 IPR008146 Glutamine synthetase, catalytic domain JE55_RS02400 IPR008147 Glutamine synthetase, beta-Grasp JE55_RS02400 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JE55_RS02400 IPR027303 Glutamine synthetase, glycine-rich site JE55_RS02405 IPR011697 Peptidase C26 JE55_RS02405 IPR029062 Class I glutamine amidotransferase-like JE55_RS02425 IPR002508 Cell wall hydrolase/autolysin, catalytic JE55_RS02425 IPR007709 N-formylglutamate amidohydrolase JE55_RS02425 IPR010247 N-formylglutamate deformylase JE55_RS02430 IPR006680 Amidohydrolase 1 JE55_RS02430 IPR010252 Formiminoglutamate deiminase JE55_RS02430 IPR011059 Metal-dependent hydrolase, composite domain JE55_RS02430 IPR032466 JE55_RS02430 JE55_RS02435 IPR005920 Imidazolonepropionase JE55_RS02435 IPR006680 Amidohydrolase 1 JE55_RS02435 IPR011059 Metal-dependent hydrolase, composite domain JE55_RS02435 IPR032466 JE55_RS02435 JE55_RS02440 IPR010282 Uncharacterised protein family HutD/Ves JE55_RS02440 IPR011051 RmlC-like cupin domain JE55_RS02440 IPR014710 RmlC-like jelly roll fold JE55_RS02445 IPR023636 Urocanase conserved site JE55_RS02445 IPR023637 Urocanase JE55_RS02450 IPR000524 Transcription regulator HTH, GntR JE55_RS02450 IPR010248 Histidine utilization repressor JE55_RS02450 IPR011663 UbiC transcription regulator-associated JE55_RS02450 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02450 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS02455 IPR001106 Aromatic amino acid lyase JE55_RS02455 IPR005921 Histidine ammonia-lyase JE55_RS02455 IPR008948 L-Aspartase-like JE55_RS02455 IPR022313 Phenylalanine/histidine ammonia-lyases, active site JE55_RS02455 IPR024083 Fumarase/histidase, N-terminal JE55_RS02460 IPR008278 4'-phosphopantetheinyl transferase superfamily JE55_RS02465 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 JE55_RS02465 IPR022742 Putative lysophospholipase JE55_RS02465 IPR029058 Alpha/Beta hydrolase fold JE55_RS02475 IPR000792 Transcription regulator LuxR, C-terminal JE55_RS02475 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain JE55_RS02475 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02475 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS02480 IPR002891 Adenylylsulphate kinase JE55_RS02480 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02485 IPR002081 Cryptochrome/DNA photolyase, class 1 JE55_RS02485 IPR005101 DNA photolyase, FAD-binding/Cryptochrome, C-terminal JE55_RS02485 IPR006050 DNA photolyase, N-terminal JE55_RS02485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS02485 IPR018394 Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal JE55_RS02490 IPR005804 Fatty acid desaturase, type 1 JE55_RS02495 IPR000883 Cytochrome c oxidase subunit I JE55_RS02495 IPR023616 Cytochrome c oxidase, subunit I domain JE55_RS02500 IPR002744 Domain of unknown function DUF59 JE55_RS02510 IPR010266 NnrS JE55_RS02515 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic JE55_RS02520 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic JE55_RS02525 IPR007197 Radical SAM JE55_RS02525 IPR012840 Ribonucleoside-triphosphate reductase, anaerobic-like JE55_RS02525 IPR013785 Aldolase-type TIM barrel JE55_RS02530 IPR014958 DGC JE55_RS02535 IPR003033 SCP2 sterol-binding domain JE55_RS02540 IPR001539 Peptidase U32 JE55_RS02545 IPR001539 Peptidase U32 JE55_RS02545 IPR011060 Ribulose-phosphate binding barrel JE55_RS02545 IPR013785 Aldolase-type TIM barrel JE55_RS02550 IPR004136 2-nitropropane dioxygenase, NPD JE55_RS02550 IPR013785 Aldolase-type TIM barrel JE55_RS02560 IPR000595 Cyclic nucleotide-binding domain JE55_RS02560 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02560 IPR012318 Helix-turn-helix motif, Crp-type JE55_RS02560 IPR014710 RmlC-like jelly roll fold JE55_RS02560 IPR018490 Cyclic nucleotide-binding-like JE55_RS02565 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN JE55_RS02565 IPR006638 Elongator protein 3/MiaB/NifB JE55_RS02565 IPR007197 Radical SAM JE55_RS02565 IPR010723 HemN, C-terminal domain JE55_RS02565 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS02570 IPR003660 HAMP linker domain JE55_RS02570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JE55_RS02575 IPR010266 NnrS JE55_RS02580 IPR000825 SUF system FeS cluster assembly, SufBD JE55_RS02580 IPR010231 SUF system FeS cluster assembly, SufB JE55_RS02585 IPR003439 ABC transporter-like JE55_RS02585 IPR003593 AAA+ ATPase domain JE55_RS02585 IPR010230 FeS cluster assembly SUF system, ATPase SufC JE55_RS02585 IPR017871 ABC transporter, conserved site JE55_RS02585 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02590 IPR000825 SUF system FeS cluster assembly, SufBD JE55_RS02590 IPR011542 SUF system FeS cluster assembly, SufD JE55_RS02595 IPR000192 Aminotransferase class V domain JE55_RS02595 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS02595 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS02595 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS02595 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site JE55_RS02600 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal JE55_RS02605 IPR002744 Domain of unknown function DUF59 JE55_RS02605 IPR017776 FeS assembly SUF system protein SufT, putative JE55_RS02610 IPR018720 Domain of unknown function DUF2249 JE55_RS02615 IPR000944 Transcription regulator Rrf2-like JE55_RS02615 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02620 IPR012312 Haemerythrin/HHE cation-binding motif JE55_RS02620 IPR012827 Haemerythrin-like, metal-binding domain JE55_RS02620 IPR016131 Haemerythrin, iron-binding site JE55_RS02630 IPR002429 Cytochrome c oxidase subunit II C-terminal JE55_RS02630 IPR006333 Cytochrome o ubiquinol oxidase subunit II JE55_RS02630 IPR008972 Cupredoxin JE55_RS02630 IPR010514 COX aromatic rich motif JE55_RS02630 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain JE55_RS02635 IPR000883 Cytochrome c oxidase subunit I JE55_RS02635 IPR014207 Cytochrome o ubiquinol oxidase, subunit I JE55_RS02635 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site JE55_RS02635 IPR023616 Cytochrome c oxidase, subunit I domain JE55_RS02640 IPR000298 Cytochrome c oxidase subunit III domain JE55_RS02640 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle JE55_RS02640 IPR014206 Cytochrome o ubiquinol oxidase, subunit III JE55_RS02640 IPR024791 Cytochrome c oxidase subunit III JE55_RS02645 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes JE55_RS02645 IPR014210 Cytochrome o ubiquinol oxidase subunit IV JE55_RS02650 IPR005804 Fatty acid desaturase, type 1 JE55_RS02655 IPR001638 Extracellular solute-binding protein, family 3 JE55_RS02655 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein JE55_RS02655 IPR018313 Extracellular solute-binding protein, family 3, conserved site JE55_RS02660 IPR004046 Glutathione S-transferase, C-terminal JE55_RS02660 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS02665 IPR007036 Succinylglutamate desuccinylase/aspartoacylase JE55_RS02665 IPR016681 Succinylglutamate desuccinylase JE55_RS02670 IPR007079 Succinylarginine dihydrolase JE55_RS02675 IPR015590 Aldehyde dehydrogenase domain JE55_RS02675 IPR016160 Aldehyde dehydrogenase, cysteine active site JE55_RS02675 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS02675 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS02675 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS02675 IPR017649 Succinylglutamic semialdehyde dehydrogenase JE55_RS02675 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JE55_RS02680 IPR007041 Arginine N-succinyltransferase Ast/AOST JE55_RS02680 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02680 IPR017650 Arginine N-succinyltransferase AstA JE55_RS02685 IPR007041 Arginine N-succinyltransferase Ast/AOST JE55_RS02685 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02685 IPR017651 Arginine/ornithine succinyltransferase, alpha subunit JE55_RS02690 IPR004636 Acetylornithine/Succinylornithine transaminase family JE55_RS02690 IPR005814 Aminotransferase class-III JE55_RS02690 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS02690 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS02690 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS02690 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria JE55_RS02695 IPR009057 Homeodomain-like JE55_RS02695 IPR018060 DNA binding HTH domain, AraC-type JE55_RS02695 IPR018062 HTH domain AraC-type, conserved site JE55_RS02695 IPR020449 Transcription regulator HTH, AraC- type JE55_RS02695 IPR029062 Class I glutamine amidotransferase-like JE55_RS02700 IPR003439 ABC transporter-like JE55_RS02700 IPR003593 AAA+ ATPase domain JE55_RS02700 IPR017871 ABC transporter, conserved site JE55_RS02700 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02700 IPR030679 JE55_RS02700 JE55_RS02705 IPR000515 MetI-like domain JE55_RS02705 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family JE55_RS02710 IPR000515 MetI-like domain JE55_RS02710 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family JE55_RS02710 IPR030199 JE55_RS02710 JE55_RS02715 IPR007450 Lipoprotein SmpA/OmlA JE55_RS02720 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD JE55_RS02725 IPR002509 Polysaccharide deacetylase JE55_RS02725 IPR006879 Uncharacterised protein family UPF0249/HpnK JE55_RS02725 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JE55_RS02725 IPR017836 Hopanoid biosynthesis associated protein HpnK JE55_RS02730 IPR006638 Elongator protein 3/MiaB/NifB JE55_RS02730 IPR007197 Radical SAM JE55_RS02730 IPR017834 Hopanoid biosynthesis associated radical SAM protein HpnJ JE55_RS02730 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS02730 IPR023970 Methylthiotransferase/radical SAM-type protein JE55_RS02735 IPR017835 Hopanoid biosynthesis associated glycosyltransferase, HpnI JE55_RS02735 IPR025993 Ceramide glucosyltransferase JE55_RS02735 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS02740 IPR011251 Luciferase-like domain JE55_RS02740 IPR019949 Luciferase family oxidoreductase, group 1 JE55_RS02745 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS02745 IPR000639 Epoxide hydrolase-like JE55_RS02745 IPR029058 Alpha/Beta hydrolase fold JE55_RS02750 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase JE55_RS02750 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase JE55_RS02750 IPR023685 Pyridoxal kinase PdxY JE55_RS02750 IPR029056 Ribokinase-like JE55_RS02760 IPR007312 Phosphoesterase JE55_RS02760 IPR008475 Bacterial phospholipase C, C-terminal domain JE55_RS02760 IPR017767 Bacterial phospholipase C, phosphocholine-specific JE55_RS02760 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JE55_RS02765 IPR000709 Leu/Ile/Val-binding protein JE55_RS02765 IPR028081 Leucine-binding protein domain JE55_RS02765 IPR028082 Periplasmic binding protein-like I JE55_RS02770 IPR006076 FAD dependent oxidoreductase JE55_RS02770 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS02775 IPR018706 Protein of unknown function DUF2214, membrane JE55_RS02785 IPR001296 Glycosyl transferase, family 1 JE55_RS02785 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain JE55_RS02790 IPR003439 ABC transporter-like JE55_RS02790 IPR003593 AAA+ ATPase domain JE55_RS02790 IPR011527 ABC transporter type 1, transmembrane domain JE55_RS02790 IPR017871 ABC transporter, conserved site JE55_RS02790 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02795 IPR001830 Glycosyl transferase, family 20 JE55_RS02795 IPR012766 Alpha,alpha-trehalose-phosphate synthase JE55_RS02800 IPR003337 Trehalose-phosphatase JE55_RS02800 IPR006379 HAD-superfamily hydrolase, subfamily IIB JE55_RS02800 IPR023214 HAD-like domain JE55_RS02805 IPR003782 Copper chaperone SCO1/SenC JE55_RS02805 IPR012336 Thioredoxin-like fold JE55_RS02810 IPR007410 DR1885-like metal-binding protein JE55_RS02815 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related JE55_RS02820 IPR000182 GNAT domain JE55_RS02820 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02825 IPR003829 Pirin, N-terminal domain JE55_RS02825 IPR008778 Pirin, C-terminal domain JE55_RS02825 IPR011051 RmlC-like cupin domain JE55_RS02825 IPR012093 Pirin JE55_RS02825 IPR014710 RmlC-like jelly roll fold JE55_RS02830 IPR000847 Transcription regulator HTH, LysR JE55_RS02830 IPR005119 LysR, substrate-binding JE55_RS02830 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02835 IPR000614 Free Met sulfoxide reductase conserved site JE55_RS02835 IPR003018 GAF domain JE55_RS02835 IPR029016 GAF domain-like JE55_RS02840 IPR024524 Protein of unknown function DUF3800 JE55_RS02845 IPR003738 Protein of unknown function DUF159 JE55_RS02865 IPR012263 Adenine modification methylase, M.EcoRV-type JE55_RS02865 IPR012327 D12 class N6 adenine-specific DNA methyltransferase JE55_RS02865 IPR023095 Adenine-specific methyltransferase, domain 2 JE55_RS02865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS02870 IPR019659 Protein of unknown function DUF2514 JE55_RS02875 IPR002196 Glycoside hydrolase, family 24 JE55_RS02875 IPR023346 Lysozyme-like domain JE55_RS02880 IPR007633 Bacteriophage P2, GpY, holin JE55_RS02890 IPR015406 Domain of unknown function DUF1983 JE55_RS02890 IPR032876 JE55_RS02890 JE55_RS02895 IPR010654 Bacteriophage lambda tail assembly I JE55_RS02900 IPR000064 Endopeptidase, NLPC/P60 domain JE55_RS02900 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain JE55_RS02900 IPR028090 JAB domain, prokaryotic JE55_RS02910 IPR030392 JE55_RS02910 JE55_RS02915 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal JE55_RS02920 IPR014915 Bacteriophage TLS, TfmB JE55_RS02945 IPR011231 Bacteriophage VT1-Sakai, H0018 JE55_RS02955 IPR006429 Bacteriophage lambda, GpB, portal JE55_RS02965 IPR008866 Bacteriophage lambda, GpA JE55_RS02985 IPR007936 Virulence-associated E JE55_RS02985 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02985 IPR018541 FtsK gamma domain JE55_RS02995 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS03000 IPR001387 Cro/C1-type helix-turn-helix domain JE55_RS03000 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS03020 IPR003115 ParB/Sulfiredoxin JE55_RS03050 IPR002104 Integrase, catalytic JE55_RS03050 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS03050 IPR013762 Integrase-like, catalytic core JE55_RS03050 IPR023109 Integrase/recombinase, N-terminal JE55_RS03070 IPR000462 CDP-alcohol phosphatidyltransferase JE55_RS03070 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase JE55_RS03075 IPR000305 GIY-YIG nuclease superfamily JE55_RS03075 IPR001162 UvrC family homology region JE55_RS03075 IPR001943 UVR domain JE55_RS03075 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JE55_RS03075 IPR004791 UvrABC system, subunit C JE55_RS03075 IPR010994 RuvA domain 2-like JE55_RS03075 IPR027299 GIY-YIG domain JE55_RS03080 IPR016633 Uncharacterised conserved protein UCP015557 JE55_RS03085 IPR001059 Translation elongation factor P/YeiP, central JE55_RS03085 IPR008991 Translation protein SH3-like domain JE55_RS03085 IPR011768 Translation elongation factor P JE55_RS03085 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03085 IPR013185 Translation elongation factor, KOW-like JE55_RS03085 IPR013852 Translation elongation factor P/YeiP, conserved site JE55_RS03085 IPR014722 Ribosomal protein L2 domain 2 JE55_RS03085 IPR015365 Elongation factor P, C-terminal JE55_RS03085 IPR020599 Translation elongation factor P/YeiP JE55_RS03090 IPR001789 Signal transduction response regulator, receiver domain JE55_RS03090 IPR002078 RNA polymerase sigma factor 54 interaction domain JE55_RS03090 IPR002197 DNA binding HTH domain, Fis-type JE55_RS03090 IPR003593 AAA+ ATPase domain JE55_RS03090 IPR009057 Homeodomain-like JE55_RS03090 IPR011006 CheY-like superfamily JE55_RS03090 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03095 IPR001764 Glycoside hydrolase, family 3, N-terminal JE55_RS03095 IPR017853 Glycoside hydrolase, superfamily JE55_RS03095 IPR022956 Beta-hexosaminidase, bacterial JE55_RS03100 IPR002582 Holo-[acyl carrier protein] synthase JE55_RS03100 IPR004568 Phosphopantethiene-protein transferase domain JE55_RS03100 IPR008278 4'-phosphopantetheinyl transferase superfamily JE55_RS03105 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ JE55_RS03105 IPR013785 Aldolase-type TIM barrel JE55_RS03110 IPR003717 Recombination protein O, RecO JE55_RS03110 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03110 IPR022572 DNA replication/recombination mediator RecO, N-terminal JE55_RS03115 IPR004044 K Homology domain, type 2 JE55_RS03115 IPR005225 Small GTP-binding protein domain JE55_RS03115 IPR005662 GTP-binding protein Era JE55_RS03115 IPR006073 GTP binding domain JE55_RS03115 IPR009019 K homology domain, prokaryotic type JE55_RS03115 IPR015946 K homology domain-like, alpha/beta JE55_RS03115 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03120 IPR000999 Ribonuclease III domain JE55_RS03120 IPR011907 Ribonuclease III JE55_RS03120 IPR014720 Double-stranded RNA-binding domain JE55_RS03125 IPR000223 Peptidase S26A, signal peptidase I JE55_RS03125 IPR015927 Peptidase S24/S26A/S26B/S26C JE55_RS03125 IPR019533 Peptidase S26 JE55_RS03125 IPR019756 Peptidase S26A, signal peptidase I, serine active site JE55_RS03125 IPR019757 Peptidase S26A, signal peptidase I, lysine active site JE55_RS03125 IPR019758 Peptidase S26A, signal peptidase I, conserved site JE55_RS03125 IPR019759 Peptidase S24/S26A/S26B JE55_RS03125 IPR028360 Peptidase S24/S26, beta-ribbon domain JE55_RS03130 IPR000640 Translation elongation factor EFG, V domain JE55_RS03130 IPR000795 Elongation factor, GTP-binding domain JE55_RS03130 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 JE55_RS03130 IPR005225 Small GTP-binding protein domain JE55_RS03130 IPR006297 Elongation factor 4 JE55_RS03130 IPR009000 Translation protein, beta-barrel domain JE55_RS03130 IPR009022 Elongation factor G, III-V domain JE55_RS03130 IPR013842 GTP-binding protein LepA, C-terminal JE55_RS03130 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03130 IPR031157 JE55_RS03130 JE55_RS03135 IPR008554 Glutaredoxin-like JE55_RS03135 IPR012336 Thioredoxin-like fold JE55_RS03140 IPR001478 PDZ domain JE55_RS03140 IPR001940 Peptidase S1C JE55_RS03140 IPR009003 Trypsin-like cysteine/serine peptidase domain JE55_RS03140 IPR011782 Peptidase S1C, Do JE55_RS03145 IPR005588 MucB/RseB JE55_RS03145 IPR033434 JE55_RS03145 JE55_RS03145 IPR033436 JE55_RS03145 JE55_RS03150 IPR005572 Anti sigma-E protein RseA, N-terminal JE55_RS03155 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site JE55_RS03155 IPR007627 RNA polymerase sigma-70 region 2 JE55_RS03155 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03155 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JE55_RS03155 IPR013324 RNA polymerase sigma factor, region 3/4 JE55_RS03155 IPR013325 RNA polymerase sigma factor, region 2 JE55_RS03155 IPR014284 RNA polymerase sigma-70 like domain JE55_RS03155 IPR014286 RNA polymerase sigma-70 RpoE type JE55_RS03165 IPR014030 Beta-ketoacyl synthase, N-terminal JE55_RS03165 IPR014031 Beta-ketoacyl synthase, C-terminal JE55_RS03165 IPR016039 Thiolase-like JE55_RS03165 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 JE55_RS03165 IPR018201 Beta-ketoacyl synthase, active site JE55_RS03165 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JE55_RS03170 IPR003231 Acyl carrier protein (ACP) JE55_RS03170 IPR006162 Phosphopantetheine attachment site JE55_RS03170 IPR009081 Acyl carrier protein-like JE55_RS03175 IPR002347 Glucose/ribitol dehydrogenase JE55_RS03175 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase JE55_RS03175 IPR016040 NAD(P)-binding domain JE55_RS03175 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS03180 IPR001227 Acyl transferase domain JE55_RS03180 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type JE55_RS03180 IPR014043 Acyl transferase JE55_RS03180 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JE55_RS03180 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JE55_RS03180 IPR020801 Polyketide synthase, acyl transferase domain JE55_RS03180 IPR024925 Malonyl CoA-acyl carrier protein transacylase JE55_RS03185 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 JE55_RS03185 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal JE55_RS03185 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JE55_RS03185 IPR016039 Thiolase-like JE55_RS03190 IPR003664 Fatty acid synthesis PlsX protein JE55_RS03190 IPR012281 Phospholipid biosynthesis protein, PlsX-like JE55_RS03190 IPR024084 Isopropylmalate dehydrogenase-like domain JE55_RS03195 IPR002677 Ribosomal protein L32p JE55_RS03195 IPR011332 Zinc-binding ribosomal protein JE55_RS03200 IPR003772 Protein of unknown function DUF177 JE55_RS03205 IPR003697 Maf-like protein JE55_RS03205 IPR029001 Inosine triphosphate pyrophosphatase-like JE55_RS03210 IPR000878 Tetrapyrrole methylase JE55_RS03210 IPR008189 rRNA small subunit methyltransferase I JE55_RS03210 IPR014776 Tetrapyrrole methylase, subdomain 2 JE55_RS03215 IPR002142 Peptidase S49 JE55_RS03215 IPR029045 ClpP/crotonase-like domain JE55_RS03220 IPR017941 Rieske [2Fe-2S] iron-sulphur domain JE55_RS03225 IPR006439 HAD hydrolase, subfamily IA JE55_RS03225 IPR023198 Phosphoglycolate phosphatase, domain 2 JE55_RS03225 IPR023214 HAD-like domain JE55_RS03230 IPR002942 RNA-binding S4 domain JE55_RS03230 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JE55_RS03230 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JE55_RS03230 IPR006225 Pseudouridine synthase, RluC/RluD JE55_RS03230 IPR020103 Pseudouridine synthase, catalytic domain JE55_RS03235 IPR003029 Ribosomal protein S1, RNA-binding domain JE55_RS03235 IPR004659 Ribonuclease E/G JE55_RS03235 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03235 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G JE55_RS03235 IPR022967 RNA-binding domain, S1 JE55_RS03235 IPR028878 Ribonuclease E JE55_RS03240 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site JE55_RS03240 IPR006638 Elongator protein 3/MiaB/NifB JE55_RS03240 IPR007197 Radical SAM JE55_RS03240 IPR010505 Molybdenum cofactor synthesis C-terminal JE55_RS03240 IPR013483 Molybdenum cofactor biosynthesis protein A JE55_RS03240 IPR013785 Aldolase-type TIM barrel JE55_RS03245 IPR013482 Molybdenum cofactor guanylyltransferase JE55_RS03245 IPR025877 MobA-like NTP transferase domain JE55_RS03245 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS03250 IPR001453 Molybdopterin binding domain JE55_RS03250 IPR005110 MoeA, N-terminal and linker domain JE55_RS03250 IPR005111 MoeA, C-terminal, domain IV JE55_RS03260 IPR000182 GNAT domain JE55_RS03260 IPR016181 Acyl-CoA N-acyltransferase JE55_RS03265 IPR003798 DNA recombination RmuC JE55_RS03270 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JE55_RS03270 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JE55_RS03270 IPR016040 NAD(P)-binding domain JE55_RS03270 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JE55_RS03275 IPR031566 JE55_RS03275 JE55_RS03285 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal JE55_RS03285 IPR006406 Nicotinate phosphoribosyltransferase JE55_RS03285 IPR007229 Nicotinate phosphoribosyltransferase family JE55_RS03290 IPR000813 7Fe ferredoxin JE55_RS03290 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS03290 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS03290 IPR022569 Ferredoxin, C-terminal JE55_RS03305 IPR010292 Uncharacterised protein family CreA JE55_RS03310 IPR025146 Protein of unknown function DUF4088 JE55_RS03320 IPR002942 RNA-binding S4 domain JE55_RS03325 IPR002528 Multi antimicrobial extrusion protein JE55_RS03335 IPR000362 Fumarate lyase family JE55_RS03335 IPR005677 Fumarate hydratase, class II JE55_RS03335 IPR008948 L-Aspartase-like JE55_RS03335 IPR018951 Fumarase C, C-terminal JE55_RS03335 IPR020557 Fumarate lyase, conserved site JE55_RS03335 IPR022761 Fumarate lyase, N-terminal JE55_RS03335 IPR024083 Fumarase/histidase, N-terminal JE55_RS03340 IPR006683 Thioesterase superfamily JE55_RS03340 IPR029069 HotDog domain JE55_RS03350 IPR001845 HTH ArsR-type DNA-binding domain JE55_RS03350 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03360 IPR000398 Thymidylate synthase JE55_RS03360 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain JE55_RS03365 IPR002078 RNA polymerase sigma factor 54 interaction domain JE55_RS03365 IPR002197 DNA binding HTH domain, Fis-type JE55_RS03365 IPR003593 AAA+ ATPase domain JE55_RS03365 IPR009057 Homeodomain-like JE55_RS03365 IPR011006 CheY-like superfamily JE55_RS03365 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS03365 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS03365 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03395 IPR002078 RNA polymerase sigma factor 54 interaction domain JE55_RS03395 IPR002197 DNA binding HTH domain, Fis-type JE55_RS03395 IPR003593 AAA+ ATPase domain JE55_RS03395 IPR009057 Homeodomain-like JE55_RS03395 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS03395 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS03395 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03400 IPR001796 Dihydrofolate reductase domain JE55_RS03400 IPR012259 Dihydrofolate reductase JE55_RS03400 IPR017925 Dihydrofolate reductase conserved site JE55_RS03400 IPR024072 Dihydrofolate reductase-like domain JE55_RS03405 IPR008490 Transposase InsH, N-terminal JE55_RS03405 IPR025668 Transposase DDE domain JE55_RS03410 IPR002510 TldD/PmbA JE55_RS03415 IPR006839 Ribosome-associated, YjgA JE55_RS03415 IPR023153 PSPTO4464-like domain JE55_RS03420 IPR001453 Molybdopterin binding domain JE55_RS03420 IPR008284 Molybdenum cofactor biosynthesis, conserved site JE55_RS03425 IPR012337 Ribonuclease H-like domain JE55_RS03425 IPR013520 Exonuclease, RNase T/DNA polymerase III JE55_RS03425 IPR022894 Oligoribonuclease JE55_RS03430 IPR001915 Peptidase M48 JE55_RS03430 IPR027057 CAAX prenyl protease 1 JE55_RS03430 IPR032456 JE55_RS03430 JE55_RS03435 IPR004881 Ribosome biogenesis GTPase RsgA, putative JE55_RS03435 IPR010914 EngC GTPase JE55_RS03435 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03435 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03445 IPR004485 Cobalamin biosynthesis CobD/CbiB JE55_RS03450 IPR000086 NUDIX hydrolase domain JE55_RS03450 IPR015797 NUDIX hydrolase domain-like JE55_RS03455 IPR016181 Acyl-CoA N-acyltransferase JE55_RS03460 IPR001857 Ribosomal protein L19 JE55_RS03460 IPR008991 Translation protein SH3-like domain JE55_RS03460 IPR018257 Ribosomal protein L19, conserved site JE55_RS03465 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria JE55_RS03465 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain JE55_RS03465 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal JE55_RS03465 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS03465 IPR029028 Alpha/beta knot methyltransferases JE55_RS03470 IPR002676 RimM protein JE55_RS03470 IPR009000 Translation protein, beta-barrel domain JE55_RS03470 IPR011033 PRC-barrel-like JE55_RS03470 IPR011961 16S rRNA processing protein RimM JE55_RS03470 IPR027275 PRC-barrel domain JE55_RS03475 IPR000307 Ribosomal protein S16 JE55_RS03475 IPR023803 Ribosomal protein S16 domain JE55_RS03480 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase JE55_RS03480 IPR011042 Six-bladed beta-propeller, TolB-like JE55_RS03480 IPR012938 Glucose/Sorbosone dehydrogenase JE55_RS03485 IPR007829 TM2 domain JE55_RS03490 IPR006638 Elongator protein 3/MiaB/NifB JE55_RS03490 IPR007197 Radical SAM JE55_RS03490 IPR013785 Aldolase-type TIM barrel JE55_RS03495 IPR000485 AsnC-type HTH domain JE55_RS03495 IPR011008 Dimeric alpha-beta barrel JE55_RS03495 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03495 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JE55_RS03495 IPR019887 Transcription regulator AsnC-type, C-terminal JE55_RS03495 IPR019888 Transcription regulator AsnC-type JE55_RS03500 IPR006076 FAD dependent oxidoreductase JE55_RS03500 IPR016040 NAD(P)-binding domain JE55_RS03500 IPR023080 D-amino acid dehydrogenase small subunit, DadA JE55_RS03500 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS03505 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS03505 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS03505 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS03505 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JE55_RS03505 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria JE55_RS03505 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain JE55_RS03510 IPR001308 Electron transfer flavoprotein, alpha subunit JE55_RS03510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS03510 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal JE55_RS03510 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal JE55_RS03510 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site JE55_RS03510 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS03515 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site JE55_RS03515 IPR012255 Electron transfer flavoprotein, beta subunit JE55_RS03515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS03515 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal JE55_RS03520 IPR004872 Lipoprotein NlpA family JE55_RS03525 IPR000515 MetI-like domain JE55_RS03530 IPR003439 ABC transporter-like JE55_RS03530 IPR003593 AAA+ ATPase domain JE55_RS03530 IPR017871 ABC transporter, conserved site JE55_RS03530 IPR018449 NIL domain JE55_RS03530 IPR026253 Methionine import ATP-binding protein MetN JE55_RS03530 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03535 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS03535 IPR022742 Putative lysophospholipase JE55_RS03535 IPR029058 Alpha/Beta hydrolase fold JE55_RS03540 IPR000286 Histone deacetylase superfamily JE55_RS03540 IPR023801 Histone deacetylase domain JE55_RS03545 IPR011757 Lytic transglycosylase MltB JE55_RS03545 IPR023346 Lysozyme-like domain JE55_RS03545 IPR031304 JE55_RS03545 JE55_RS03550 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site JE55_RS03550 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS03550 IPR005856 Cysteine synthase K/M JE55_RS03550 IPR005858 Cysteine synthase B JE55_RS03560 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JE55_RS03560 IPR010994 RuvA domain 2-like JE55_RS03565 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain JE55_RS03565 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase JE55_RS03565 IPR016040 NAD(P)-binding domain JE55_RS03570 IPR011611 Carbohydrate kinase PfkB JE55_RS03570 IPR011913 RfaE bifunctional protein, domain I JE55_RS03570 IPR029056 Ribokinase-like JE55_RS03575 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal JE55_RS03575 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS03575 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation JE55_RS03575 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal JE55_RS03575 IPR016040 NAD(P)-binding domain JE55_RS03575 IPR017476 UDP-glucose/GDP-mannose dehydrogenase JE55_RS03575 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type JE55_RS03580 IPR011990 Tetratricopeptide-like helical domain JE55_RS03580 IPR019734 Tetratricopeptide repeat JE55_RS03580 IPR030865 JE55_RS03580 JE55_RS03585 IPR010445 Protein of unknown function DUF1049 JE55_RS03590 IPR000119 Histone-like bacterial DNA-binding protein JE55_RS03590 IPR005685 Integration host factor, beta subunit JE55_RS03590 IPR010992 Integration host factor (IHF)-like DNA-binding domain JE55_RS03595 IPR000110 Ribosomal protein S1 JE55_RS03595 IPR003029 Ribosomal protein S1, RNA-binding domain JE55_RS03595 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 IPR022967 RNA-binding domain, S1 JE55_RS03600 IPR003136 Cytidylate kinase JE55_RS03600 IPR011994 Cytidylate kinase domain JE55_RS03600 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03605 IPR001986 Enolpyruvate transferase domain JE55_RS03605 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase JE55_RS03605 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JE55_RS03605 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site JE55_RS03610 IPR001086 Prephenate dehydratase JE55_RS03610 IPR002701 Chorismate mutase JE55_RS03610 IPR002912 ACT domain JE55_RS03610 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase JE55_RS03610 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain JE55_RS03610 IPR018528 Prephenate dehydratase, conserved site JE55_RS03610 IPR020822 Chorismate mutase, type II JE55_RS03615 IPR000192 Aminotransferase class V domain JE55_RS03615 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS03615 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS03615 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS03615 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site JE55_RS03615 IPR022278 Phosphoserine aminotransferase JE55_RS03620 IPR018637 Domain of unknown function DUF2059 JE55_RS03625 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal JE55_RS03625 IPR005743 DNA gyrase, subunit A JE55_RS03625 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel JE55_RS03625 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain JE55_RS03625 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta JE55_RS03625 IPR013760 DNA topoisomerase, type IIA-like domain JE55_RS03625 IPR024946 Arginine repressor C-terminal-like domain JE55_RS03630 IPR002368 Outer membrane protein, OmpA JE55_RS03630 IPR006664 Outer membrane protein, bacterial JE55_RS03630 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JE55_RS03635 IPR010233 Ubiquinone biosynthesis O-methyltransferase JE55_RS03635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS03640 IPR006346 2-phosphoglycolate phosphatase, prokaryotic JE55_RS03640 IPR006439 HAD hydrolase, subfamily IA JE55_RS03640 IPR023198 Phosphoglycolate phosphatase, domain 2 JE55_RS03640 IPR023214 HAD-like domain JE55_RS03645 IPR001737 Ribosomal RNA adenine methylase transferase JE55_RS03645 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site JE55_RS03645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS03655 IPR000847 Transcription regulator HTH, LysR JE55_RS03655 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03655 IPR024370 PBP domain JE55_RS03660 IPR002023 NADH-quinone oxidoreductase subunit E-like JE55_RS03660 IPR012336 Thioredoxin-like fold JE55_RS03665 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site JE55_RS03665 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit JE55_RS03665 IPR012336 Thioredoxin-like fold JE55_RS03665 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding JE55_RS03670 IPR001041 2Fe-2S ferredoxin-type domain JE55_RS03670 IPR006478 Formate dehydrogenase, alpha subunit JE55_RS03670 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site JE55_RS03670 IPR006656 Molybdopterin oxidoreductase JE55_RS03670 IPR006657 Molydopterin dinucleotide-binding domain JE55_RS03670 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain JE55_RS03670 IPR009010 Aspartate decarboxylase-like domain JE55_RS03670 IPR012675 Beta-grasp domain JE55_RS03670 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS03670 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS03670 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding JE55_RS03675 IPR021074 Formate dehydrogenase, delta subunit JE55_RS03680 IPR002938 Monooxygenase, FAD-binding JE55_RS03680 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS03685 IPR001440 Tetratricopeptide TPR1 JE55_RS03685 IPR002201 Glycosyl transferase, family 9 JE55_RS03685 IPR011990 Tetratricopeptide-like helical domain JE55_RS03685 IPR013105 Tetratricopeptide TPR2 JE55_RS03685 IPR019734 Tetratricopeptide repeat JE55_RS03690 IPR005828 General substrate transporter JE55_RS03690 IPR005829 Sugar transporter, conserved site JE55_RS03690 IPR020846 Major facilitator superfamily domain JE55_RS03695 IPR011697 Peptidase C26 JE55_RS03695 IPR029062 Class I glutamine amidotransferase-like JE55_RS03700 IPR000120 Amidase JE55_RS03700 IPR020556 Amidase, conserved site JE55_RS03700 IPR023631 Amidase signature domain JE55_RS03705 IPR003752 Disulphide bond formation protein DsbB/BdbC JE55_RS03705 IPR022920 Disulphide bond formation protein DsbB JE55_RS03705 IPR023380 Disulphide bond formation protein DsbB-like domain JE55_RS03710 IPR003777 XdhC- CoxI JE55_RS03710 IPR014308 Xanthine dehydrogenase accessory protein XdhC JE55_RS03710 IPR027051 XdhC Rossmann domain JE55_RS03715 IPR001365 Adenosine/AMP deaminase domain JE55_RS03715 IPR006330 Adenosine/adenine deaminase JE55_RS03715 IPR028892 Adenine deaminase type 2 JE55_RS03715 IPR032466 JE55_RS03715 JE55_RS03720 IPR006043 Xanthine/uracil/vitamin C permease JE55_RS03725 IPR006680 Amidohydrolase 1 JE55_RS03725 IPR011059 Metal-dependent hydrolase, composite domain JE55_RS03725 IPR014311 Guanine deaminase JE55_RS03725 IPR032466 JE55_RS03725 JE55_RS03735 IPR001727 Uncharacterised protein family UPF0016 JE55_RS03740 IPR025411 Domain of unknown function DUF4136 JE55_RS03745 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase JE55_RS03745 IPR012779 Peptidase M1, alanyl aminopeptidase JE55_RS03745 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal JE55_RS03745 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal JE55_RS03750 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal JE55_RS03750 IPR006276 Cobalamin-independent methionine synthase JE55_RS03750 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal JE55_RS03755 IPR000847 Transcription regulator HTH, LysR JE55_RS03755 IPR005119 LysR, substrate-binding JE55_RS03755 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03760 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase JE55_RS03760 IPR028343 Fructose-1,6-bisphosphatase JE55_RS03760 IPR033391 JE55_RS03760 JE55_RS03790 IPR007341 Transglycosylase-associated protein JE55_RS03795 IPR012336 Thioredoxin-like fold JE55_RS03800 IPR011040 Sialidases JE55_RS03805 IPR000531 TonB-dependent receptor, beta-barrel JE55_RS03805 IPR012910 TonB-dependent receptor, plug JE55_RS03810 IPR021333 Protein of unknown function DUF2946 JE55_RS03820 IPR002701 Chorismate mutase JE55_RS03820 IPR008240 Chorismate mutase, periplasmic JE55_RS03820 IPR020822 Chorismate mutase, type II JE55_RS03825 IPR000305 GIY-YIG nuclease superfamily JE55_RS03825 IPR006054 DNA polymerase III, epsilon subunit JE55_RS03825 IPR012337 Ribonuclease H-like domain JE55_RS03825 IPR013520 Exonuclease, RNase T/DNA polymerase III JE55_RS03830 IPR002059 Cold-shock protein, DNA-binding JE55_RS03830 IPR011129 Cold shock protein JE55_RS03830 IPR012156 Cold shock, CspA JE55_RS03830 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03830 IPR019844 Cold-shock conserved site JE55_RS03840 IPR001702 Porin, Gram-negative type JE55_RS03840 IPR002299 Porin, Neisseria sp. type JE55_RS03840 IPR023614 Porin domain JE55_RS03845 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal JE55_RS03845 IPR006358 Transcription elongation factor GreB JE55_RS03845 IPR018151 Transcription elongation factor, GreA/GreB, conserved site JE55_RS03845 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal JE55_RS03845 IPR023459 Transcription elongation factor GreA/GreB family JE55_RS03845 IPR028624 Transcription elongation factor GreA/GreB JE55_RS03860 IPR002912 ACT domain JE55_RS03860 IPR003607 HD/PDEase domain JE55_RS03860 IPR004095 TGS JE55_RS03860 IPR004811 RelA/SpoT family JE55_RS03860 IPR007685 RelA/SpoT JE55_RS03860 IPR012675 Beta-grasp domain JE55_RS03860 IPR012676 TGS-like JE55_RS03865 IPR003716 DNA-directed RNA polymerase, omega subunit JE55_RS03865 IPR006110 RNA polymerase, subunit omega/K/RPB6 JE55_RS03865 IPR012293 RNA polymerase subunit, RPB6/omega JE55_RS03870 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JE55_RS03870 IPR017665 Guanylate kinase JE55_RS03870 IPR020590 Guanylate kinase, conserved site JE55_RS03870 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03875 IPR005229 Conserved hypothetical protein CHP00255 JE55_RS03875 IPR013527 YicC-like, N-terminal JE55_RS03875 IPR013551 Domain of unknown function DUF1732 JE55_RS03880 IPR001247 Exoribonuclease, phosphorolytic domain 1 JE55_RS03880 IPR002381 Ribonuclease phosphorolytic, bacterial-type JE55_RS03880 IPR015847 Exoribonuclease, phosphorolytic domain 2 JE55_RS03880 IPR018336 Ribonuclease PH, conserved site JE55_RS03880 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS03880 IPR027408 PNPase/RNase PH domain JE55_RS03885 IPR002637 Ham1-like protein JE55_RS03885 IPR020922 Non-canonical purine NTP pyrophosphatase JE55_RS03885 IPR029001 Inosine triphosphate pyrophosphatase-like JE55_RS03890 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related JE55_RS03890 IPR006638 Elongator protein 3/MiaB/NifB JE55_RS03890 IPR007197 Radical SAM JE55_RS03890 IPR010723 HemN, C-terminal domain JE55_RS03890 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS03915 IPR006260 TonB, C-terminal JE55_RS03920 IPR005828 General substrate transporter JE55_RS03920 IPR005829 Sugar transporter, conserved site JE55_RS03920 IPR011701 Major facilitator superfamily JE55_RS03920 IPR020846 Major facilitator superfamily domain JE55_RS03930 IPR002201 Glycosyl transferase, family 9 JE55_RS03930 IPR011908 Lipopolysaccharide heptosyltransferase I JE55_RS03935 IPR001807 Chloride channel, voltage gated JE55_RS03935 IPR014743 Chloride channel, core JE55_RS03945 IPR024447 YXWGXW repeat JE55_RS03950 IPR005527 Septum formation topological specificity factor MinE JE55_RS03955 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS03955 IPR010223 ATP binding protein MinD, bacterial-type JE55_RS03955 IPR025501 ATP binding protein MinD JE55_RS03955 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03960 IPR005526 Septum formation inhibitor MinC, C-terminal JE55_RS03960 IPR007874 Septum formation inhibitor MinC, N-terminal JE55_RS03960 IPR013033 Septum formation inhibitor MinC JE55_RS03960 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal JE55_RS03965 IPR000182 GNAT domain JE55_RS03965 IPR016181 Acyl-CoA N-acyltransferase JE55_RS03985 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain JE55_RS03985 IPR002317 Serine-tRNA ligase, type1 JE55_RS03985 IPR010978 tRNA-binding arm JE55_RS03985 IPR015866 Serine-tRNA synthetase, type1, N-terminal JE55_RS03990 IPR018680 Protein of unknown function DUF2164 JE55_RS03995 IPR003593 AAA+ ATPase domain JE55_RS03995 IPR003959 ATPase, AAA-type, core JE55_RS03995 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JE55_RS03995 IPR021886 MgsA AAA+ ATPase C-terminal JE55_RS03995 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03995 IPR032423 JE55_RS03995 JE55_RS04000 IPR004564 Outer membrane lipoprotein carrier protein LolA-like JE55_RS04000 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria JE55_RS04000 IPR029046 Lipoprotein localisation LolA/LolB/LppX JE55_RS04005 IPR002543 FtsK domain JE55_RS04005 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04005 IPR018541 FtsK gamma domain JE55_RS04005 IPR025199 Domain of unknown function DUF4117 JE55_RS04005 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04010 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II JE55_RS04010 IPR005982 Thioredoxin reductase JE55_RS04010 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site JE55_RS04010 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS04015 IPR002625 Smr protein/MutS2 C-terminal JE55_RS04020 IPR005115 Uncharacterised domain UPF0126 JE55_RS04025 IPR003439 ABC transporter-like JE55_RS04025 IPR003593 AAA+ ATPase domain JE55_RS04025 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS04025 IPR012340 Nucleic acid-binding, OB-fold JE55_RS04025 IPR013611 Transport-associated OB, type 2 JE55_RS04025 IPR017871 ABC transporter, conserved site JE55_RS04025 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04030 IPR000515 MetI-like domain JE55_RS04035 IPR000515 MetI-like domain JE55_RS04040 IPR006059 Bacterial extracellular solute-binding, family 1 JE55_RS04045 IPR001282 Glucose-6-phosphate dehydrogenase JE55_RS04045 IPR016040 NAD(P)-binding domain JE55_RS04045 IPR019796 Glucose-6-phosphate dehydrogenase, active site JE55_RS04045 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding JE55_RS04045 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal JE55_RS04050 IPR005900 6-phosphogluconolactonase, DevB-type JE55_RS04050 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase JE55_RS04055 IPR000281 Helix-turn-helix protein RpiR JE55_RS04055 IPR000843 Transcription regulator HTH, LacI JE55_RS04055 IPR001347 Sugar isomerase (SIS) JE55_RS04055 IPR003836 Glucokinase JE55_RS04055 IPR009057 Homeodomain-like JE55_RS04055 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04060 IPR001638 Extracellular solute-binding protein, family 3 JE55_RS04060 IPR018313 Extracellular solute-binding protein, family 3, conserved site JE55_RS04065 IPR000515 MetI-like domain JE55_RS04065 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family JE55_RS04070 IPR003439 ABC transporter-like JE55_RS04070 IPR003593 AAA+ ATPase domain JE55_RS04070 IPR017871 ABC transporter, conserved site JE55_RS04070 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04070 IPR030206 JE55_RS04070 JE55_RS04070 IPR030679 JE55_RS04070 JE55_RS04075 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS04075 IPR005966 D-cysteine desulfhydrase JE55_RS04075 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase JE55_RS04080 IPR021439 Protein of unknown function DUF3088 JE55_RS04085 IPR004812 Drug resistance transporter Bcr/CmlA subfamily JE55_RS04085 IPR011701 Major facilitator superfamily JE55_RS04085 IPR020846 Major facilitator superfamily domain JE55_RS04095 IPR015947 PUA-like domain JE55_RS04100 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase JE55_RS04100 IPR005814 Aminotransferase class-III JE55_RS04100 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS04100 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS04100 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS04105 IPR002125 CMP/dCMP deaminase, zinc-binding JE55_RS04105 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal JE55_RS04105 IPR004794 Riboflavin biosynthesis protein RibD JE55_RS04105 IPR011549 Riboflavin-specific deaminase, C-terminal JE55_RS04105 IPR016192 APOBEC/CMP deaminase, zinc-binding JE55_RS04105 IPR016193 Cytidine deaminase-like JE55_RS04105 IPR024072 Dihydrofolate reductase-like domain JE55_RS04110 IPR001783 Lumazine-binding protein JE55_RS04110 IPR017938 Riboflavin synthase-like beta-barrel JE55_RS04110 IPR023366 ATP synthase subunit alpha-like domain JE55_RS04110 IPR026017 Lumazine-binding domain JE55_RS04115 IPR004027 SEC-C motif JE55_RS04115 IPR032710 JE55_RS04115 JE55_RS04120 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB JE55_RS04120 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS04120 IPR032677 JE55_RS04120 JE55_RS04125 IPR002180 6,7-dimethyl-8-ribityllumazine synthase JE55_RS04130 IPR006027 NusB/RsmB/TIM44 JE55_RS04130 IPR011605 NusB antitermination factor JE55_RS04135 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site JE55_RS04135 IPR004839 Aminotransferase, class I/classII JE55_RS04135 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS04135 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS04135 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS04140 IPR008258 Lytic transglycosylase-like SLT domain JE55_RS04140 IPR023346 Lysozyme-like domain JE55_RS04145 IPR002830 UbiD decarboxylyase family JE55_RS04145 IPR012349 FMN-binding split barrel JE55_RS04145 IPR023677 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JE55_RS04150 IPR001123 Lysine-type exporter protein (LYSE/YGGA) JE55_RS04155 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS04165 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS04165 IPR016040 NAD(P)-binding domain JE55_RS04165 IPR018931 Domain of unknown function DUF2520 JE55_RS04165 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain JE55_RS04165 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal JE55_RS04170 IPR003425 Uncharacterised protein family Ycf19 JE55_RS04175 IPR003793 Domain of unknown function DUF190 JE55_RS04175 IPR011322 Nitrogen regulatory PII-like, alpha/beta JE55_RS04175 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JE55_RS04180 IPR003691 Putative fluoride ion transporter CrcB JE55_RS04185 IPR000209 Peptidase S8/S53 domain JE55_RS04190 IPR013216 Methyltransferase type 11 JE55_RS04190 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS04195 IPR003000 Sirtuin family JE55_RS04195 IPR026591 Sirtuin family, catalytic core small domain JE55_RS04195 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS04210 IPR003358 tRNA (guanine-N-7) methyltransferase JE55_RS04210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS04215 IPR003824 Undecaprenyl-diphosphatase UppP JE55_RS04220 IPR010835 Protein of unknown function DUF1439 JE55_RS04230 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN JE55_RS04230 IPR006638 Elongator protein 3/MiaB/NifB JE55_RS04230 IPR007197 Radical SAM JE55_RS04230 IPR010723 HemN, C-terminal domain JE55_RS04230 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS04240 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase JE55_RS04240 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal JE55_RS04240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS04245 IPR001763 Rhodanese-like domain JE55_RS04250 IPR005814 Aminotransferase class-III JE55_RS04250 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS04250 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS04250 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS04255 IPR017777 ABC transporter, urea, substrate-binding, UrtA JE55_RS04255 IPR028082 Periplasmic binding protein-like I JE55_RS04260 IPR001851 ABC transporter, permease JE55_RS04260 IPR017779 ABC transporter, urea, permease protein, UrtB JE55_RS04265 IPR001851 ABC transporter, permease JE55_RS04265 IPR017778 ABC transporter, urea, permease protein, UrtC JE55_RS04270 IPR003439 ABC transporter-like JE55_RS04270 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD JE55_RS04270 IPR017871 ABC transporter, conserved site JE55_RS04270 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04270 IPR032823 JE55_RS04270 JE55_RS04275 IPR003439 ABC transporter-like JE55_RS04275 IPR003593 AAA+ ATPase domain JE55_RS04275 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE JE55_RS04275 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04280 IPR002669 Urease accessory protein UreD JE55_RS04285 IPR002026 Urease, gamma/gamma-beta subunit JE55_RS04285 IPR012010 Urease, gamma subunit JE55_RS04290 IPR002019 Urease, beta subunit JE55_RS04295 IPR005848 Urease, alpha subunit JE55_RS04295 IPR006680 Amidohydrolase 1 JE55_RS04295 IPR011059 Metal-dependent hydrolase, composite domain JE55_RS04295 IPR011612 Urease alpha-subunit, N-terminal domain JE55_RS04295 IPR017950 Urease active site JE55_RS04295 IPR029754 Urease nickel binding site JE55_RS04295 IPR032466 JE55_RS04295 JE55_RS04300 IPR004029 UreE urease accessory, N-terminal JE55_RS04300 IPR007864 Urease accessory protein UreE, C-terminal domain JE55_RS04300 IPR012406 Urease accessory protein UreE JE55_RS04305 IPR002639 Urease accessory protein UreF JE55_RS04310 IPR003495 CobW/HypB/UreG domain JE55_RS04310 IPR004400 Urease accessory protein UreG JE55_RS04310 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04315 IPR001296 Glycosyl transferase, family 1 JE55_RS04315 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal JE55_RS04320 IPR021266 Kdo hydroxylase JE55_RS04325 IPR002201 Glycosyl transferase, family 9 JE55_RS04325 IPR011908 Lipopolysaccharide heptosyltransferase I JE55_RS04330 IPR005841 Alpha-D-phosphohexomutase superfamily JE55_RS04330 IPR005843 Alpha-D-phosphohexomutase, C-terminal JE55_RS04330 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JE55_RS04330 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JE55_RS04330 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JE55_RS04330 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JE55_RS04335 IPR002797 Polysaccharide biosynthesis protein JE55_RS04345 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain JE55_RS04350 IPR005886 UDP-glucose 4-epimerase GalE JE55_RS04350 IPR016040 NAD(P)-binding domain JE55_RS04355 IPR000715 Glycosyl transferase, family 4 JE55_RS04360 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain JE55_RS04360 IPR016040 NAD(P)-binding domain JE55_RS04365 IPR000715 Glycosyl transferase, family 4 JE55_RS04370 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain JE55_RS04370 IPR016040 NAD(P)-binding domain JE55_RS04375 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04380 IPR001173 Glycosyltransferase 2-like JE55_RS04380 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04385 IPR001173 Glycosyltransferase 2-like JE55_RS04385 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS04390 IPR001173 Glycosyltransferase 2-like JE55_RS04390 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04395 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain JE55_RS04395 IPR008089 Nucleotide sugar epimerase JE55_RS04395 IPR016040 NAD(P)-binding domain JE55_RS04400 IPR002656 Acyltransferase 3 JE55_RS04405 IPR003439 ABC transporter-like JE55_RS04405 IPR003593 AAA+ ATPase domain JE55_RS04405 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04405 IPR029439 Wzt, C-terminal JE55_RS04410 IPR000412 ABC-2 transporter JE55_RS04410 IPR013525 ABC-2 type transporter JE55_RS04415 IPR005913 dTDP-4-dehydrorhamnose reductase JE55_RS04415 IPR016040 NAD(P)-binding domain JE55_RS04415 IPR029903 JE55_RS04415 JE55_RS04420 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related JE55_RS04420 IPR011051 RmlC-like cupin domain JE55_RS04420 IPR014710 RmlC-like jelly roll fold JE55_RS04425 IPR005835 Nucleotidyl transferase JE55_RS04425 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form JE55_RS04425 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04430 IPR005888 dTDP-glucose 4,6-dehydratase JE55_RS04430 IPR016040 NAD(P)-binding domain JE55_RS04435 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) JE55_RS04435 IPR004843 Calcineurin-like phosphoesterase domain, apaH type JE55_RS04435 IPR029052 Metallo-dependent phosphatase-like JE55_RS04440 IPR002123 Phospholipid/glycerol acyltransferase JE55_RS04445 IPR004722 Dihydroorotase JE55_RS04445 IPR006680 Amidohydrolase 1 JE55_RS04445 IPR011059 Metal-dependent hydrolase, composite domain JE55_RS04445 IPR032466 JE55_RS04445 JE55_RS04450 IPR002082 Aspartate carbamoyltransferase JE55_RS04450 IPR006130 Aspartate/ornithine carbamoyltransferase JE55_RS04450 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain JE55_RS04450 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding JE55_RS04455 IPR000836 Phosphoribosyltransferase domain JE55_RS04455 IPR029057 Phosphoribosyltransferase-like JE55_RS04460 IPR005227 Resolvase, holliday junction-type, YqgF-like JE55_RS04460 IPR006641 YqgF/RNase H-like domain JE55_RS04460 IPR012337 Ribonuclease H-like domain JE55_RS04465 IPR003774 Protein of unknown function UPF0301 JE55_RS04475 IPR004039 Rubredoxin-type fold JE55_RS04475 IPR018527 Rubredoxin, iron-binding site JE55_RS04475 IPR024922 Rubredoxin JE55_RS04475 IPR024935 Rubredoxin domain JE55_RS04480 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase JE55_RS04480 IPR029056 Ribokinase-like JE55_RS04485 IPR001844 Chaperonin Cpn60 JE55_RS04485 IPR002423 Chaperonin Cpn60/TCP-1 JE55_RS04485 IPR018370 Chaperonin Cpn60, conserved site JE55_RS04485 IPR027409 GroEL-like apical domain JE55_RS04485 IPR027413 GroEL-like equatorial domain JE55_RS04490 IPR011032 GroES (chaperonin 10)-like JE55_RS04490 IPR018369 Chaperonin Cpn10, conserved site JE55_RS04490 IPR020818 Chaperonin Cpn10 JE55_RS04495 IPR011989 Armadillo-like helical JE55_RS04495 IPR016024 Armadillo-type fold JE55_RS04500 IPR002577 Helix-turn-helix, HxlR type JE55_RS04500 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04505 IPR002085 Alcohol dehydrogenase superfamily, zinc-type JE55_RS04505 IPR011032 GroES (chaperonin 10)-like JE55_RS04505 IPR013149 Alcohol dehydrogenase, C-terminal JE55_RS04505 IPR013154 Alcohol dehydrogenase GroES-like JE55_RS04505 IPR016040 NAD(P)-binding domain JE55_RS04505 IPR020843 Polyketide synthase, enoylreductase JE55_RS04520 IPR005618 Outer membrane protein, OmpW JE55_RS04520 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel JE55_RS04525 IPR021340 Protein of unknown function DUF2957 JE55_RS04530 IPR021340 Protein of unknown function DUF2957 JE55_RS04535 IPR002577 Helix-turn-helix, HxlR type JE55_RS04535 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04540 IPR001279 Beta-lactamase-like JE55_RS04545 IPR001387 Cro/C1-type helix-turn-helix domain JE55_RS04545 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS04545 IPR011051 RmlC-like cupin domain JE55_RS04545 IPR014710 RmlC-like jelly roll fold JE55_RS04550 IPR000182 GNAT domain JE55_RS04550 IPR016181 Acyl-CoA N-acyltransferase JE55_RS04555 IPR001123 Lysine-type exporter protein (LYSE/YGGA) JE55_RS04565 IPR004129 Glycerophosphoryl diester phosphodiesterase JE55_RS04565 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain JE55_RS04565 IPR030395 JE55_RS04565 JE55_RS04570 IPR004638 Drug resistance transporter EmrB/QacA subfamily JE55_RS04570 IPR011701 Major facilitator superfamily JE55_RS04570 IPR020846 Major facilitator superfamily domain JE55_RS04575 IPR002781 Transmembrane protein TauE like JE55_RS04580 IPR001563 Peptidase S10, serine carboxypeptidase JE55_RS04580 IPR029058 Alpha/Beta hydrolase fold JE55_RS04585 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative JE55_RS04585 IPR029058 Alpha/Beta hydrolase fold JE55_RS04590 IPR007055 BON domain JE55_RS04600 IPR011852 TRAP transporter solute receptor, TAXI family JE55_RS04605 IPR001853 DSBA-like thioredoxin domain JE55_RS04605 IPR012336 Thioredoxin-like fold JE55_RS04605 IPR014440 HCCA isomerase/glutathione S-transferase kappa JE55_RS04610 IPR000847 Transcription regulator HTH, LysR JE55_RS04610 IPR005119 LysR, substrate-binding JE55_RS04610 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04615 IPR000522 ABC transporter, permease protein JE55_RS04615 IPR029022 ABC transporter, BtuC-like JE55_RS04620 IPR002491 ABC transporter periplasmic binding domain JE55_RS04625 IPR003439 ABC transporter-like JE55_RS04625 IPR003593 AAA+ ATPase domain JE55_RS04625 IPR017871 ABC transporter, conserved site JE55_RS04625 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04630 IPR000531 TonB-dependent receptor, beta-barrel JE55_RS04630 IPR010105 TonB-dependent siderophore receptor JE55_RS04630 IPR012910 TonB-dependent receptor, plug JE55_RS04640 IPR009959 Polyketide cyclase SnoaL-like domain JE55_RS04640 IPR016918 Uncharacterised conserved protein UCP029394 JE55_RS04640 IPR032710 JE55_RS04640 JE55_RS04650 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JE55_RS04650 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding JE55_RS04650 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit JE55_RS04655 IPR001041 2Fe-2S ferredoxin-type domain JE55_RS04655 IPR002346 Molybdopterin dehydrogenase, FAD-binding JE55_RS04655 IPR002888 [2Fe-2S]-binding JE55_RS04655 IPR005107 CO dehydrogenase flavoprotein, C-terminal JE55_RS04655 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site JE55_RS04655 IPR012175 Xanthine dehydrogenase, small subunit, bacteria JE55_RS04655 IPR012675 Beta-grasp domain JE55_RS04655 IPR014307 Xanthine dehydrogenase, small subunit JE55_RS04655 IPR016166 FAD-binding, type 2 JE55_RS04655 IPR016167 FAD-binding, type 2, subdomain 1 JE55_RS04655 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JE55_RS04660 IPR011701 Major facilitator superfamily JE55_RS04660 IPR020846 Major facilitator superfamily domain JE55_RS04660 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily JE55_RS04665 IPR000620 Drug/metabolite transporter JE55_RS04670 IPR009057 Homeodomain-like JE55_RS04670 IPR018060 DNA binding HTH domain, AraC-type JE55_RS04670 IPR018062 HTH domain AraC-type, conserved site JE55_RS04675 IPR000192 Aminotransferase class V domain JE55_RS04675 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS04675 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS04675 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS04675 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site JE55_RS04675 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase JE55_RS04680 IPR000847 Transcription regulator HTH, LysR JE55_RS04680 IPR005119 LysR, substrate-binding JE55_RS04680 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04685 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JE55_RS04685 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JE55_RS04685 IPR016040 NAD(P)-binding domain JE55_RS04685 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JE55_RS04690 IPR000415 Nitroreductase-like JE55_RS04690 IPR012825 5,6-dimethylbenzimidazole synthase BluB JE55_RS04690 IPR029479 Nitroreductase JE55_RS04695 IPR011701 Major facilitator superfamily JE55_RS04695 IPR020846 Major facilitator superfamily domain JE55_RS04705 IPR011701 Major facilitator superfamily JE55_RS04705 IPR020846 Major facilitator superfamily domain JE55_RS04710 IPR005959 Fumarylacetoacetase JE55_RS04710 IPR011234 Fumarylacetoacetase, C-terminal-related JE55_RS04710 IPR015377 Fumarylacetoacetase, N-terminal JE55_RS04715 IPR005708 Homogentisate 1,2-dioxygenase JE55_RS04715 IPR011051 RmlC-like cupin domain JE55_RS04715 IPR014710 RmlC-like jelly roll fold JE55_RS04715 IPR022950 Homogentisate 1,2-dioxygenase, bacterial JE55_RS04720 IPR005829 Sugar transporter, conserved site JE55_RS04720 IPR011701 Major facilitator superfamily JE55_RS04720 IPR020846 Major facilitator superfamily domain JE55_RS04725 IPR021233 Protein of unknown function DUF2783 JE55_RS04730 IPR002938 Monooxygenase, FAD-binding JE55_RS04730 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS04735 IPR001279 Beta-lactamase-like JE55_RS04740 IPR001633 EAL domain JE55_RS04745 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V JE55_RS04745 IPR011057 Mss4-like JE55_RS04755 IPR005471 Transcription regulator IclR, N-terminal JE55_RS04755 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04755 IPR014757 Transcription regulator IclR, C-terminal JE55_RS04755 IPR029016 GAF domain-like JE55_RS04760 IPR006089 Acyl-CoA dehydrogenase, conserved site JE55_RS04760 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS04760 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS04760 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS04760 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JE55_RS04770 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JE55_RS04770 IPR012336 Thioredoxin-like fold JE55_RS04770 IPR019479 Peroxiredoxin, C-terminal JE55_RS04770 IPR024706 Peroxiredoxin, AhpC-type JE55_RS04775 IPR010279 Protein of unknown function DUF883, ElaB JE55_RS04780 IPR009937 Protein of unknown function DUF1469 JE55_RS04785 IPR021751 Protein of unknown function DUF3318 JE55_RS04790 IPR012902 Prokaryotic N-terminal methylation site JE55_RS04800 IPR032092 JE55_RS04800 JE55_RS04810 IPR022346 General secretion pathway, GspH JE55_RS04815 IPR003796 Ribonucleotide reductase regulator NrdR-like JE55_RS04815 IPR005144 ATP-cone JE55_RS04820 IPR001085 Serine hydroxymethyltransferase JE55_RS04820 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS04820 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS04820 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS04820 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site JE55_RS04825 IPR002347 Glucose/ribitol dehydrogenase JE55_RS04825 IPR016040 NAD(P)-binding domain JE55_RS04825 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS04830 IPR006683 Thioesterase superfamily JE55_RS04830 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family JE55_RS04830 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase JE55_RS04830 IPR029069 HotDog domain JE55_RS04835 IPR002898 MotA/TolQ/ExbB proton channel JE55_RS04835 IPR014163 Tol-Pal system, TolQ JE55_RS04840 IPR003400 Biopolymer transport protein ExbD/TolR JE55_RS04840 IPR014168 Biopolymer transport, TolR JE55_RS04845 IPR006260 TonB, C-terminal JE55_RS04845 IPR014161 Tol-Pal system, TolA JE55_RS04850 IPR007195 TolB, N-terminal JE55_RS04850 IPR011659 WD40-like Beta Propeller JE55_RS04850 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB JE55_RS04850 IPR015943 WD40/YVTN repeat-like-containing domain JE55_RS04855 IPR006664 Outer membrane protein, bacterial JE55_RS04855 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JE55_RS04855 IPR006690 Outer membrane protein, OmpA-like, conserved site JE55_RS04855 IPR014169 Peptidoglycan-associated lipoprotein JE55_RS04860 IPR011990 Tetratricopeptide-like helical domain JE55_RS04860 IPR014162 Tol-Pal system, YbgF JE55_RS04860 IPR032519 JE55_RS04860 JE55_RS04875 IPR023559 Flagellar transcriptional activator FlhD JE55_RS04885 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type JE55_RS04885 IPR005835 Nucleotidyl transferase JE55_RS04885 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04890 IPR000644 CBS domain JE55_RS04890 IPR001347 Sugar isomerase (SIS) JE55_RS04890 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type JE55_RS04895 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase JE55_RS04895 IPR023214 HAD-like domain JE55_RS04900 IPR006218 DAHP synthetase I/KDSA JE55_RS04900 IPR006269 3-deoxy-8-phosphooctulonate synthase JE55_RS04900 IPR013785 Aldolase-type TIM barrel JE55_RS04905 IPR001296 Glycosyl transferase, family 1 JE55_RS04905 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain JE55_RS04915 IPR001451 Bacterial transferase hexapeptide repeat JE55_RS04915 IPR005881 Serine O-acetyltransferase JE55_RS04915 IPR011004 Trimeric LpxA-like JE55_RS04920 IPR007833 Capsule polysaccharide biosynthesis JE55_RS04930 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS04930 IPR003856 Lipopolysaccharide biosynthesis JE55_RS04930 IPR005700 Exopolysaccharide transport protein JE55_RS04930 IPR005702 Exopolysaccharide synthesis protein JE55_RS04930 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04930 IPR032807 JE55_RS04930 JE55_RS04935 IPR017867 Protein-tyrosine phosphatase, low molecular weight JE55_RS04935 IPR023485 Phosphotyrosine protein phosphatase I superfamily JE55_RS04940 IPR003715 Polysaccharide export protein JE55_RS04940 IPR019554 Soluble ligand binding domain JE55_RS04945 IPR003362 Bacterial sugar transferase JE55_RS04950 IPR009057 Homeodomain-like JE55_RS04950 IPR018060 DNA binding HTH domain, AraC-type JE55_RS04950 IPR018062 HTH domain AraC-type, conserved site JE55_RS04950 IPR029062 Class I glutamine amidotransferase-like JE55_RS04955 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JE55_RS04965 IPR011040 Sialidases JE55_RS04975 IPR000182 GNAT domain JE55_RS04975 IPR016181 Acyl-CoA N-acyltransferase JE55_RS04980 IPR004839 Aminotransferase, class I/classII JE55_RS04980 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS04980 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS04980 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS04985 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase JE55_RS04985 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal JE55_RS04985 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal JE55_RS04985 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS04990 IPR001227 Acyl transferase domain JE55_RS04990 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site JE55_RS04990 IPR009081 Acyl carrier protein-like JE55_RS04990 IPR011032 GroES (chaperonin 10)-like JE55_RS04990 IPR013149 Alcohol dehydrogenase, C-terminal JE55_RS04990 IPR013968 Polyketide synthase, KR JE55_RS04990 IPR014030 Beta-ketoacyl synthase, N-terminal JE55_RS04990 IPR014031 Beta-ketoacyl synthase, C-terminal JE55_RS04990 IPR014043 Acyl transferase JE55_RS04990 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JE55_RS04990 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JE55_RS04990 IPR016039 Thiolase-like JE55_RS04990 IPR016040 NAD(P)-binding domain JE55_RS04990 IPR018201 Beta-ketoacyl synthase, active site JE55_RS04990 IPR020801 Polyketide synthase, acyl transferase domain JE55_RS04990 IPR020806 Polyketide synthase, phosphopantetheine-binding domain JE55_RS04990 IPR020807 Polyketide synthase, dehydratase domain JE55_RS04990 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JE55_RS04990 IPR020843 Polyketide synthase, enoylreductase JE55_RS04990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS04990 IPR032821 JE55_RS04990 JE55_RS04995 IPR000917 Sulfatase JE55_RS04995 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha JE55_RS04995 IPR017850 Alkaline-phosphatase-like, core domain JE55_RS05000 IPR002347 Glucose/ribitol dehydrogenase JE55_RS05000 IPR016040 NAD(P)-binding domain JE55_RS05000 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS05005 IPR007833 Capsule polysaccharide biosynthesis JE55_RS05010 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase JE55_RS05010 IPR006543 Histidinol-phosphate phosphatase JE55_RS05010 IPR006549 HAD-superfamily hydrolase,subfamily IIIA JE55_RS05010 IPR023214 HAD-like domain JE55_RS05015 IPR005835 Nucleotidyl transferase JE55_RS05015 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS05020 IPR001347 Sugar isomerase (SIS) JE55_RS05020 IPR004515 Phosphoheptose isomerase JE55_RS05025 IPR001174 Galactokinase/homoserine kinase JE55_RS05025 IPR006204 GHMP kinase N-terminal domain JE55_RS05025 IPR013750 GHMP kinase, C-terminal domain JE55_RS05025 IPR014606 D,D-heptose 7-phosphate kinase JE55_RS05025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS05025 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS05030 IPR016040 NAD(P)-binding domain JE55_RS05035 IPR005913 dTDP-4-dehydrorhamnose reductase JE55_RS05035 IPR016040 NAD(P)-binding domain JE55_RS05035 IPR029903 JE55_RS05035 JE55_RS05045 IPR001296 Glycosyl transferase, family 1 JE55_RS05045 IPR025282 Domain of unknown function DUF4214 JE55_RS05055 IPR005331 Sulfotransferase JE55_RS05055 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05060 IPR001296 Glycosyl transferase, family 1 JE55_RS05065 IPR003439 ABC transporter-like JE55_RS05065 IPR003593 AAA+ ATPase domain JE55_RS05065 IPR017871 ABC transporter, conserved site JE55_RS05065 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05070 IPR000412 ABC-2 transporter JE55_RS05070 IPR013525 ABC-2 type transporter JE55_RS05080 IPR003715 Polysaccharide export protein JE55_RS05085 IPR001296 Glycosyl transferase, family 1 JE55_RS05090 IPR007833 Capsule polysaccharide biosynthesis JE55_RS05095 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal JE55_RS05095 IPR005835 Nucleotidyl transferase JE55_RS05095 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase JE55_RS05095 IPR011051 RmlC-like cupin domain JE55_RS05095 IPR014710 RmlC-like jelly roll fold JE55_RS05095 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS05100 IPR026869 Putative glutamine amidotransferase type 2 JE55_RS05100 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS05105 IPR006685 Mechanosensitive ion channel MscS JE55_RS05105 IPR010920 Like-Sm (LSM) domain JE55_RS05105 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 JE55_RS05105 IPR011066 Mechanosensitive ion channel MscS, C-terminal JE55_RS05110 IPR032816 JE55_RS05110 JE55_RS05110 IPR032818 JE55_RS05110 JE55_RS05115 IPR002099 DNA mismatch repair protein family JE55_RS05115 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS05115 IPR013507 DNA mismatch repair protein, C-terminal JE55_RS05115 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS05115 IPR014762 DNA mismatch repair, conserved site JE55_RS05115 IPR014790 MutL, C-terminal, dimerisation JE55_RS05115 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS05115 IPR020667 DNA mismatch repair protein, MutL JE55_RS05120 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase JE55_RS05120 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05125 IPR011944 Steroid delta5-4-isomerase JE55_RS05125 IPR027843 Domain of unknown function DUF4440 JE55_RS05125 IPR032710 JE55_RS05125 JE55_RS05130 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase JE55_RS05130 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS05130 IPR016188 PurM, N-terminal-like JE55_RS05135 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) JE55_RS05135 IPR017788 DnaA regulatory inactivator Hda JE55_RS05135 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05140 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like JE55_RS05140 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial JE55_RS05140 IPR023214 HAD-like domain JE55_RS05145 IPR002646 Poly A polymerase, head domain JE55_RS05145 IPR010206 Poly(A) polymerase I JE55_RS05145 IPR025866 Polymerase A arginine-rich C-terminal domain JE55_RS05145 IPR032828 JE55_RS05145 JE55_RS05150 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK JE55_RS05155 IPR002624 Deoxynucleoside kinase JE55_RS05155 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05155 IPR031314 JE55_RS05155 JE55_RS05160 IPR003700 Ketopantoate hydroxymethyltransferase JE55_RS05160 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JE55_RS05165 IPR001544 Aminotransferase, class IV JE55_RS05165 IPR005801 ADC synthase JE55_RS05165 IPR015890 Chorismate binding, C-terminal JE55_RS05165 IPR019999 Anthranilate synthase component I - like JE55_RS05170 IPR001305 Heat shock protein DnaJ, cysteine-rich domain JE55_RS05170 IPR001623 DnaJ domain JE55_RS05170 IPR002939 Chaperone DnaJ, C-terminal JE55_RS05170 IPR008971 HSP40/DnaJ peptide-binding JE55_RS05170 IPR012724 Chaperone DnaJ JE55_RS05170 IPR018253 DnaJ domain, conserved site JE55_RS05175 IPR012725 Chaperone DnaK JE55_RS05175 IPR013126 Heat shock protein 70 family JE55_RS05175 IPR018181 Heat shock protein 70, conserved site JE55_RS05175 IPR029047 Heat shock protein 70kD, peptide-binding domain JE55_RS05175 IPR029048 Heat shock protein 70kD, C-terminal domain JE55_RS05180 IPR012336 Thioredoxin-like fold JE55_RS05185 IPR000740 GrpE nucleotide exchange factor JE55_RS05185 IPR009012 GrpE nucleotide exchange factor, head JE55_RS05185 IPR013805 GrpE nucleotide exchange factor, coiled-coil JE55_RS05190 IPR002942 RNA-binding S4 domain JE55_RS05190 IPR025708 Heat shock protein 15 JE55_RS05195 IPR001015 Ferrochelatase JE55_RS05195 IPR019772 Ferrochelatase, active site JE55_RS05200 IPR002571 Heat-inducible transcription repressor HrcA JE55_RS05200 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain JE55_RS05200 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05200 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal JE55_RS05200 IPR029016 GAF domain-like JE55_RS05205 IPR002504 Inorganic polyphosphate/ATP-NAD kinase JE55_RS05205 IPR016064 ATP-NAD kinase-like domain JE55_RS05205 IPR017437 ATP-NAD kinase, PpnK-type, all-beta JE55_RS05205 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 JE55_RS05210 IPR003395 RecF/RecN/SMC, N-terminal JE55_RS05210 IPR003593 AAA+ ATPase domain JE55_RS05210 IPR004604 DNA recombination/repair protein RecN JE55_RS05210 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05215 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain JE55_RS05215 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase JE55_RS05215 IPR023057 Glutamate-ammonia-ligase adenylyltransferase JE55_RS05220 IPR011836 Conserved hypothetical protein CHP02099 JE55_RS05220 IPR025263 Domain of unknown function DUF3971 JE55_RS05220 IPR032712 JE55_RS05220 JE55_RS05225 IPR003010 Carbon-nitrogen hydrolase JE55_RS05230 IPR002510 TldD/PmbA JE55_RS05230 IPR025502 TldD JE55_RS05235 IPR006218 DAHP synthetase I/KDSA JE55_RS05235 IPR006219 DHAP synthase, class 1 JE55_RS05235 IPR013785 Aldolase-type TIM barrel JE55_RS05245 IPR000971 Globin JE55_RS05245 IPR001433 Oxidoreductase FAD/NAD(P)-binding JE55_RS05245 IPR008333 Oxidoreductase, FAD-binding domain JE55_RS05245 IPR009050 Globin-like JE55_RS05245 IPR012292 Globin, structural domain JE55_RS05245 IPR017938 Riboflavin synthase-like beta-barrel JE55_RS05250 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like JE55_RS05250 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type JE55_RS05255 IPR004113 FAD-linked oxidase, C-terminal JE55_RS05255 IPR006094 FAD linked oxidase, N-terminal JE55_RS05255 IPR016164 FAD-linked oxidase-like, C-terminal JE55_RS05255 IPR016166 FAD-binding, type 2 JE55_RS05255 IPR016167 FAD-binding, type 2, subdomain 1 JE55_RS05255 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JE55_RS05255 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JE55_RS05260 IPR004113 FAD-linked oxidase, C-terminal JE55_RS05260 IPR006094 FAD linked oxidase, N-terminal JE55_RS05260 IPR016164 FAD-linked oxidase-like, C-terminal JE55_RS05260 IPR016166 FAD-binding, type 2 JE55_RS05260 IPR016167 FAD-binding, type 2, subdomain 1 JE55_RS05260 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JE55_RS05260 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JE55_RS05265 IPR006094 FAD linked oxidase, N-terminal JE55_RS05265 IPR016164 FAD-linked oxidase-like, C-terminal JE55_RS05265 IPR016166 FAD-binding, type 2 JE55_RS05265 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JE55_RS05270 IPR004017 Cysteine-rich domain JE55_RS05270 IPR009051 Alpha-helical ferredoxin JE55_RS05270 IPR012257 Glycolate oxidase, iron-sulphur subunit JE55_RS05270 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS05270 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS05275 IPR001608 Alanine racemase, N-terminal JE55_RS05275 IPR011078 Uncharacterised protein family UPF0001 JE55_RS05275 IPR029066 PLP-binding barrel JE55_RS05280 IPR000304 Pyrroline-5-carboxylate reductase JE55_RS05280 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS05280 IPR016040 NAD(P)-binding domain JE55_RS05280 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal JE55_RS05280 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain JE55_RS05285 IPR000515 MetI-like domain JE55_RS05285 IPR005769 ABC transporter, permease PhnE/PtxC JE55_RS05290 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein JE55_RS05290 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein JE55_RS05295 IPR003439 ABC transporter-like JE55_RS05295 IPR003593 AAA+ ATPase domain JE55_RS05295 IPR012693 ABC transporter, phosphonate import, PhnC JE55_RS05295 IPR017871 ABC transporter, conserved site JE55_RS05295 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05300 IPR011059 Metal-dependent hydrolase, composite domain JE55_RS05300 IPR012696 Phosphonate metabolism PhnM JE55_RS05300 IPR032466 JE55_RS05300 JE55_RS05305 IPR003439 ABC transporter-like JE55_RS05305 IPR003593 AAA+ ATPase domain JE55_RS05305 IPR012701 Phosphonate C-P lyase system, PhnL JE55_RS05305 IPR017871 ABC transporter, conserved site JE55_RS05305 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05310 IPR003439 ABC transporter-like JE55_RS05310 IPR003593 AAA+ ATPase domain JE55_RS05310 IPR012700 Phosphonate C-P lyase system, PhnK JE55_RS05310 IPR017871 ABC transporter, conserved site JE55_RS05310 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05315 IPR010306 Phosphonate metabolism PhnJ JE55_RS05320 IPR008773 Phosphonate metabolism protein PhnI JE55_RS05325 IPR008772 Bacterial phosphonate metabolism, PhnH JE55_RS05330 IPR009609 Phosphonate metabolism PhnG JE55_RS05335 IPR000524 Transcription regulator HTH, GntR JE55_RS05335 IPR011663 UbiC transcription regulator-associated JE55_RS05335 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05335 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF JE55_RS05335 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS05340 IPR009389 Protein of unknown function DUF1045 JE55_RS05345 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JE55_RS05345 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN JE55_RS05345 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05350 IPR000537 UbiA prenyltransferase family JE55_RS05350 IPR006370 4-hydroxybenzoate polyprenyl transferase JE55_RS05350 IPR030470 JE55_RS05350 JE55_RS05350 IPR031103 JE55_RS05350 JE55_RS05355 IPR002577 Helix-turn-helix, HxlR type JE55_RS05355 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05365 IPR002177 DNA-binding protein Dps JE55_RS05365 IPR008331 Ferritin/DPS protein domain JE55_RS05365 IPR009078 Ferritin-like superfamily JE55_RS05365 IPR012347 Ferritin-related JE55_RS05365 IPR023188 DNA-binding protein Dps, conserved site JE55_RS05375 IPR000763 Catalase-peroxidase haem JE55_RS05375 IPR002016 Haem peroxidase, plant/fungal/bacterial JE55_RS05375 IPR010255 Haem peroxidase JE55_RS05375 IPR019793 Peroxidases heam-ligand binding site JE55_RS05375 IPR019794 Peroxidase, active site JE55_RS05380 IPR000847 Transcription regulator HTH, LysR JE55_RS05380 IPR005119 LysR, substrate-binding JE55_RS05380 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05385 IPR001650 Helicase, C-terminal JE55_RS05385 IPR004609 ATP-dependent DNA helicase RecG JE55_RS05385 IPR011545 DEAD/DEAH box helicase domain JE55_RS05385 IPR012340 Nucleic acid-binding, OB-fold JE55_RS05385 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JE55_RS05385 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05385 IPR033454 JE55_RS05385 JE55_RS05390 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA JE55_RS05395 IPR002616 tRNA-guanine(15) transglycosylase-like JE55_RS05395 IPR004803 Queuine tRNA-ribosyltransferase JE55_RS05400 IPR003849 Preprotein translocase YajC JE55_RS05405 IPR005791 Protein translocase subunit SecD JE55_RS05405 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JE55_RS05405 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JE55_RS05405 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JE55_RS05405 IPR027398 SecD export protein N-terminal TM domain JE55_RS05410 IPR005665 Protein-export membrane protein SecF, bacterial JE55_RS05410 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JE55_RS05410 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JE55_RS05410 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JE55_RS05415 IPR011701 Major facilitator superfamily JE55_RS05415 IPR020846 Major facilitator superfamily domain JE55_RS05420 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JE55_RS05425 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JE55_RS05430 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase JE55_RS05430 IPR016174 Di-haem cytochrome, transmembrane JE55_RS05440 IPR007498 Paraquat-inducible protein A JE55_RS05445 IPR007498 Paraquat-inducible protein A JE55_RS05450 IPR003399 Mammalian cell entry-related JE55_RS05455 IPR005586 Protein of unknown function DUF330 JE55_RS05460 IPR011385 Site-specific recombinase Gcr JE55_RS05465 IPR000241 Putative RNA methylase domain JE55_RS05465 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JE55_RS05465 IPR004114 THUMP JE55_RS05465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS05480 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS05490 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05490 IPR013196 Helix-turn-helix, type 11 JE55_RS05490 IPR026881 WYL domain JE55_RS05495 IPR012136 NADP transhydrogenase, beta subunit JE55_RS05495 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS05500 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal JE55_RS05505 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JE55_RS05505 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JE55_RS05505 IPR016040 NAD(P)-binding domain JE55_RS05510 IPR000086 NUDIX hydrolase domain JE55_RS05510 IPR015797 NUDIX hydrolase domain-like JE55_RS05515 IPR004506 tRNA-specific 2-thiouridylase JE55_RS05515 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS05515 IPR023382 Adenine nucleotide alpha hydrolase-like domains JE55_RS05520 IPR002932 Glutamate synthase domain JE55_RS05520 IPR013785 Aldolase-type TIM barrel JE55_RS05520 IPR024188 Glutamate synthase large subunit-like protein JE55_RS05520 IPR027283 Glutamate synthase large subunit-like protein, bacteria JE55_RS05525 IPR004045 Glutathione S-transferase, N-terminal JE55_RS05525 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS05525 IPR012336 Thioredoxin-like fold JE55_RS05530 IPR000994 Peptidase M24, structural domain JE55_RS05530 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site JE55_RS05530 IPR007865 Aminopeptidase P, N-terminal JE55_RS05530 IPR028980 Creatinase/Aminopeptidase P, N-terminal JE55_RS05530 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JE55_RS05535 IPR002938 Monooxygenase, FAD-binding JE55_RS05535 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 JE55_RS05535 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site JE55_RS05535 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS05540 IPR001269 tRNA-dihydrouridine synthase JE55_RS05540 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 JE55_RS05540 IPR013785 Aldolase-type TIM barrel JE55_RS05540 IPR018517 tRNA-dihydrouridine synthase, conserved site JE55_RS05540 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal JE55_RS05540 IPR032887 JE55_RS05540 JE55_RS05545 IPR002197 DNA binding HTH domain, Fis-type JE55_RS05545 IPR005412 DNA-binding protein Fis JE55_RS05545 IPR009057 Homeodomain-like JE55_RS05550 IPR002695 AICARFT/IMPCHase bienzyme JE55_RS05550 IPR011607 Methylglyoxal synthase-like domain JE55_RS05550 IPR016193 Cytidine deaminase-like JE55_RS05550 IPR024051 AICAR transformylase domain JE55_RS05560 IPR002176 Crossover junction endodeoxyribonuclease RuvC JE55_RS05560 IPR012337 Ribonuclease H-like domain JE55_RS05560 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site JE55_RS05565 IPR000085 Bacterial DNA recombination protein RuvA JE55_RS05565 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JE55_RS05565 IPR010994 RuvA domain 2-like JE55_RS05565 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal JE55_RS05565 IPR012340 Nucleic acid-binding, OB-fold JE55_RS05565 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial JE55_RS05570 IPR003593 AAA+ ATPase domain JE55_RS05570 IPR004605 DNA helicase, Holliday junction RuvB type JE55_RS05570 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal JE55_RS05570 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal JE55_RS05570 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05570 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05575 IPR018713 Domain of unknown function DUF2236 JE55_RS05580 IPR003115 ParB/Sulfiredoxin JE55_RS05580 IPR014956 Putative ParB-like nuclease JE55_RS05585 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS05585 IPR029033 Histidine phosphatase superfamily JE55_RS05590 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase JE55_RS05590 IPR023509 D-Tyr tRNAtyr deacylase-like domain JE55_RS05595 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JE55_RS05595 IPR002305 Aminoacyl-tRNA synthetase, class Ic JE55_RS05595 IPR002307 Tyrosine-tRNA ligase JE55_RS05595 IPR002942 RNA-binding S4 domain JE55_RS05595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS05595 IPR024088 Tyrosine-tRNA ligase, bacterial-type JE55_RS05595 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 JE55_RS05600 IPR005338 Anhydro-N-acetylmuramic acid kinase JE55_RS05605 IPR004045 Glutathione S-transferase, N-terminal JE55_RS05605 IPR004046 Glutathione S-transferase, C-terminal JE55_RS05605 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS05605 IPR012336 Thioredoxin-like fold JE55_RS05610 IPR004045 Glutathione S-transferase, N-terminal JE55_RS05610 IPR004046 Glutathione S-transferase, C-terminal JE55_RS05610 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS05610 IPR012336 Thioredoxin-like fold JE55_RS05615 IPR009057 Homeodomain-like JE55_RS05615 IPR018060 DNA binding HTH domain, AraC-type JE55_RS05615 IPR032783 JE55_RS05615 JE55_RS05620 IPR000361 FeS cluster biogenesis JE55_RS05620 IPR016092 FeS cluster insertion protein JE55_RS05620 IPR017870 FeS cluster insertion, C-terminal, conserved site JE55_RS05620 IPR023063 Iron-sulfur cluster insertion protein ErpA JE55_RS05625 IPR000754 Ribosomal protein S9 JE55_RS05625 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS05625 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS05625 IPR020574 Ribosomal protein S9, conserved site JE55_RS05625 IPR023035 Ribosomal protein S9, bacterial/plastid JE55_RS05630 IPR005822 Ribosomal protein L13 JE55_RS05630 IPR005823 Ribosomal protein L13, bacterial-type JE55_RS05630 IPR023564 Ribosomal protein L13 domain JE55_RS05635 IPR003718 OsmC/Ohr family JE55_RS05635 IPR015946 K homology domain-like, alpha/beta JE55_RS05640 IPR021390 Protein of unknown function DUF3025 JE55_RS05645 IPR002195 Dihydroorotase, conserved site JE55_RS05645 IPR004721 Dihydroorotase homodimeric type JE55_RS05645 IPR006680 Amidohydrolase 1 JE55_RS05645 IPR032466 JE55_RS05645 JE55_RS05650 IPR026869 Putative glutamine amidotransferase type 2 JE55_RS05650 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS05660 IPR002068 Alpha crystallin/Hsp20 domain JE55_RS05660 IPR008978 HSP20-like chaperone JE55_RS05660 IPR031107 JE55_RS05660 JE55_RS05665 IPR002068 Alpha crystallin/Hsp20 domain JE55_RS05665 IPR008978 HSP20-like chaperone JE55_RS05665 IPR031107 JE55_RS05665 JE55_RS05670 IPR011032 GroES (chaperonin 10)-like JE55_RS05670 IPR018369 Chaperonin Cpn10, conserved site JE55_RS05670 IPR020818 Chaperonin Cpn10 JE55_RS05675 IPR001844 Chaperonin Cpn60 JE55_RS05675 IPR002423 Chaperonin Cpn60/TCP-1 JE55_RS05675 IPR018370 Chaperonin Cpn60, conserved site JE55_RS05675 IPR027409 GroEL-like apical domain JE55_RS05675 IPR027413 GroEL-like equatorial domain JE55_RS05685 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 JE55_RS05685 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger JE55_RS05685 IPR032877 JE55_RS05685 JE55_RS05690 IPR003439 ABC transporter-like JE55_RS05690 IPR003593 AAA+ ATPase domain JE55_RS05690 IPR017871 ABC transporter, conserved site JE55_RS05690 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05690 IPR030206 JE55_RS05690 JE55_RS05690 IPR030679 JE55_RS05690 JE55_RS05695 IPR000515 MetI-like domain JE55_RS05695 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family JE55_RS05695 IPR030205 JE55_RS05695 JE55_RS05700 IPR000515 MetI-like domain JE55_RS05700 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family JE55_RS05700 IPR030202 JE55_RS05700 JE55_RS05705 IPR001638 Extracellular solute-binding protein, family 3 JE55_RS05710 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase JE55_RS05710 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal JE55_RS05710 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain JE55_RS05710 IPR014362 Glutamate dehydrogenase JE55_RS05710 IPR016040 NAD(P)-binding domain JE55_RS05715 IPR000847 Transcription regulator HTH, LysR JE55_RS05715 IPR005119 LysR, substrate-binding JE55_RS05715 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05720 IPR011701 Major facilitator superfamily JE55_RS05720 IPR020846 Major facilitator superfamily domain JE55_RS05725 IPR000362 Fumarate lyase family JE55_RS05725 IPR004769 Adenylosuccinate lyase JE55_RS05725 IPR008948 L-Aspartase-like JE55_RS05725 IPR013539 Adenylosuccinate lyase PurB, C-terminal JE55_RS05725 IPR020557 Fumarate lyase, conserved site JE55_RS05725 IPR022761 Fumarate lyase, N-terminal JE55_RS05725 IPR024083 Fumarase/histidase, N-terminal JE55_RS05730 IPR006001 Carbohydrate kinase, thermoresistant glucokinase JE55_RS05730 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05730 IPR031322 JE55_RS05730 JE55_RS05735 IPR003474 Gluconate transporter JE55_RS05740 IPR000887 KDPG/KHG aldolase JE55_RS05740 IPR013785 Aldolase-type TIM barrel JE55_RS05740 IPR031337 JE55_RS05740 JE55_RS05740 IPR031338 JE55_RS05740 JE55_RS05745 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase JE55_RS05745 IPR004786 6-phosphogluconate dehydratase JE55_RS05745 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel JE55_RS05745 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site JE55_RS05750 IPR000281 Helix-turn-helix protein RpiR JE55_RS05750 IPR001347 Sugar isomerase (SIS) JE55_RS05750 IPR009057 Homeodomain-like JE55_RS05750 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05755 IPR005265 Uncharacterised protein family UPF0093 JE55_RS05760 IPR000965 Gamma-glutamyl phosphate reductase GPR JE55_RS05760 IPR012134 Glutamate-5-semialdehyde dehydrogenase JE55_RS05760 IPR015590 Aldehyde dehydrogenase domain JE55_RS05760 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS05760 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS05760 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS05760 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site JE55_RS05765 IPR005790 DNA polymerase III, delta subunit JE55_RS05765 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JE55_RS05765 IPR010372 DNA polymerase III, delta JE55_RS05765 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05765 IPR032780 JE55_RS05765 JE55_RS05770 IPR007485 Lipopolysaccharide assembly, LptE JE55_RS05775 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JE55_RS05775 IPR002300 Aminoacyl-tRNA synthetase, class Ia JE55_RS05775 IPR002302 Leucine-tRNA ligase JE55_RS05775 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JE55_RS05775 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JE55_RS05775 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JE55_RS05775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS05775 IPR015413 Methionyl/Leucyl tRNA synthetase JE55_RS05775 IPR025709 Leucyl-tRNA synthetase, editing domain JE55_RS05780 IPR003400 Biopolymer transport protein ExbD/TolR JE55_RS05785 IPR002898 MotA/TolQ/ExbB proton channel JE55_RS05790 IPR000846 Dihydrodipicolinate reductase, N-terminal JE55_RS05790 IPR016040 NAD(P)-binding domain JE55_RS05790 IPR022663 Dihydrodipicolinate reductase, C-terminal JE55_RS05790 IPR022664 Dihydrodipicolinate reductase, conserved site JE55_RS05790 IPR023940 Dihydrodipicolinate reductase, bacterial JE55_RS05795 IPR007450 Lipoprotein SmpA/OmlA JE55_RS05795 IPR026592 Outer membrane protein assembly factor BamE JE55_RS05800 IPR002481 Ferric-uptake regulator JE55_RS05800 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05805 IPR007247 Ureidoglycolate hydrolase JE55_RS05805 IPR011051 RmlC-like cupin domain JE55_RS05805 IPR023525 Ureidoglycolate hydrolase, bacterial JE55_RS05805 IPR024060 Ureidoglycolate hydrolase domain JE55_RS05810 IPR005164 Allantoicase JE55_RS05810 IPR008979 Galactose-binding domain-like JE55_RS05810 IPR015908 Allantoicase domain JE55_RS05815 IPR001991 Sodium:dicarboxylate symporter JE55_RS05815 IPR018107 Sodium:dicarboxylate symporter, conserved site JE55_RS05820 IPR000524 Transcription regulator HTH, GntR JE55_RS05820 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS05820 IPR011711 GntR, C-terminal JE55_RS05820 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05825 IPR000847 Transcription regulator HTH, LysR JE55_RS05825 IPR005119 LysR, substrate-binding JE55_RS05825 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05830 IPR001765 Carbonic anhydrase JE55_RS05830 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site JE55_RS05835 IPR003712 Cyanate lyase, C-terminal JE55_RS05835 IPR008076 Cyanate hydratase JE55_RS05835 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS05840 IPR011701 Major facilitator superfamily JE55_RS05840 IPR020846 Major facilitator superfamily domain JE55_RS05845 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I JE55_RS05845 IPR016040 NAD(P)-binding domain JE55_RS05845 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain JE55_RS05845 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain JE55_RS05845 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site JE55_RS05845 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family JE55_RS05850 IPR005474 Transketolase, N-terminal JE55_RS05850 IPR005475 Transketolase-like, pyrimidine-binding domain JE55_RS05850 IPR005478 Transketolase, bacterial-like JE55_RS05850 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II JE55_RS05850 IPR029061 Thiamin diphosphate-binding fold JE55_RS05850 IPR033247 JE55_RS05850 JE55_RS05850 IPR033248 JE55_RS05850 JE55_RS05855 IPR001045 Spermidine/spermine synthases family JE55_RS05855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS05860 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JE55_RS05860 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS05865 IPR006700 Ribosomal RNA small subunit methyltransferase E JE55_RS05865 IPR015947 PUA-like domain JE55_RS05865 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS05865 IPR029028 Alpha/beta knot methyltransferases JE55_RS05875 IPR000468 Barstar (barnase inhibitor) JE55_RS05880 IPR000026 Guanine-specific ribonuclease N1/T1 JE55_RS05880 IPR016191 Ribonuclease/ribotoxin JE55_RS05885 IPR002505 Phosphate acetyl/butaryl transferase JE55_RS05885 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase JE55_RS05885 IPR012301 Malic enzyme, N-terminal domain JE55_RS05885 IPR012302 Malic enzyme, NAD-binding JE55_RS05885 IPR016040 NAD(P)-binding domain JE55_RS05885 IPR032683 JE55_RS05885 JE55_RS05890 IPR006283 Thiamine-monophosphate kinase JE55_RS05890 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS05890 IPR016188 PurM, N-terminal-like JE55_RS05895 IPR007686 YutG/PgpA domain JE55_RS05900 IPR008136 CinA, C-terminal JE55_RS05905 IPR001754 Orotidine 5'-phosphate decarboxylase domain JE55_RS05905 IPR011060 Ribulose-phosphate binding barrel JE55_RS05905 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 JE55_RS05905 IPR013785 Aldolase-type TIM barrel JE55_RS05905 IPR018089 Orotidine 5'-phosphate decarboxylase, active site JE55_RS05910 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase JE55_RS05910 IPR011013 Galactose mutarotase-like domain JE55_RS05910 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup JE55_RS05915 IPR002347 Glucose/ribitol dehydrogenase JE55_RS05915 IPR016040 NAD(P)-binding domain JE55_RS05915 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS05920 IPR001851 ABC transporter, permease JE55_RS05925 IPR003439 ABC transporter-like JE55_RS05925 IPR003593 AAA+ ATPase domain JE55_RS05925 IPR017871 ABC transporter, conserved site JE55_RS05925 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05930 IPR001761 Periplasmic binding protein/LacI sugar binding domain JE55_RS05930 IPR026266 L-arabinose-binding periplasmic protein JE55_RS05930 IPR028082 Periplasmic binding protein-like I JE55_RS05935 IPR002347 Glucose/ribitol dehydrogenase JE55_RS05935 IPR016040 NAD(P)-binding domain JE55_RS05935 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS05940 IPR000887 KDPG/KHG aldolase JE55_RS05940 IPR013785 Aldolase-type TIM barrel JE55_RS05945 IPR007729 2-keto-3-deoxy-galactonokinase JE55_RS05950 IPR005471 Transcription regulator IclR, N-terminal JE55_RS05950 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05950 IPR014757 Transcription regulator IclR, C-terminal JE55_RS05950 IPR029016 GAF domain-like JE55_RS05955 IPR018247 EF-Hand 1, calcium-binding site JE55_RS05960 IPR001563 Peptidase S10, serine carboxypeptidase JE55_RS05960 IPR029058 Alpha/Beta hydrolase fold JE55_RS05965 IPR001264 Glycosyl transferase, family 51 JE55_RS05965 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase JE55_RS05965 IPR023346 Lysozyme-like domain JE55_RS05970 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JE55_RS05970 IPR011342 Shikimate dehydrogenase JE55_RS05970 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal JE55_RS05970 IPR016040 NAD(P)-binding domain JE55_RS05970 IPR022893 Shikimate, quinate/shikimate dehydrogenase JE55_RS05975 IPR012340 Nucleic acid-binding, OB-fold JE55_RS05980 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA JE55_RS05980 IPR029058 Alpha/Beta hydrolase fold JE55_RS05985 IPR000713 Mur ligase, N-terminal JE55_RS05985 IPR004101 Mur ligase, C-terminal JE55_RS05985 IPR005757 Murein peptide ligase JE55_RS05985 IPR013221 Mur ligase, central JE55_RS05985 IPR016040 NAD(P)-binding domain JE55_RS05995 IPR012336 Thioredoxin-like fold JE55_RS05995 IPR013740 Redoxin JE55_RS05995 IPR017937 Thioredoxin, conserved site JE55_RS06000 IPR001874 Dehydroquinase, class II JE55_RS06000 IPR018509 Dehydroquinase, class II, conserved site JE55_RS06005 IPR000089 Biotin/lipoyl attachment JE55_RS06005 IPR001249 Acetyl-CoA biotin carboxyl carrier JE55_RS06005 IPR001882 Biotin-binding site JE55_RS06005 IPR011053 Single hybrid motif JE55_RS06010 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase JE55_RS06010 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain JE55_RS06010 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal JE55_RS06010 IPR005482 Biotin carboxylase, C-terminal JE55_RS06010 IPR011054 Rudiment single hybrid motif JE55_RS06010 IPR013815 ATP-grasp fold, subdomain 1 JE55_RS06010 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS06010 IPR016185 Pre-ATP-grasp domain JE55_RS06015 IPR004498 Ribosomal protein L11 methyltransferase JE55_RS06015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS06020 IPR011723 Zinc finger/thioredoxin putative JE55_RS06020 IPR021834 Protein of unknown function DUF3426 JE55_RS06025 IPR002065 Putative thiol peroxidase Tpx JE55_RS06025 IPR012336 Thioredoxin-like fold JE55_RS06025 IPR013740 Redoxin JE55_RS06025 IPR018219 Thiol peroxidase conserved site JE55_RS06030 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JE55_RS06030 IPR011611 Carbohydrate kinase PfkB JE55_RS06030 IPR029056 Ribokinase-like JE55_RS06035 IPR008816 Glycine zipper 2TM domain JE55_RS06040 IPR009970 Histone H1-like nucleoprotein HC2 JE55_RS06045 IPR000358 Ribonucleotide reductase small subunit JE55_RS06045 IPR009078 Ferritin-like superfamily JE55_RS06045 IPR012348 Ribonucleotide reductase-related JE55_RS06050 IPR000788 Ribonucleotide reductase large subunit, C-terminal JE55_RS06050 IPR005144 ATP-cone JE55_RS06050 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal JE55_RS06050 IPR013346 Ribonucleotide reductase, class I , alpha subunit JE55_RS06050 IPR013509 Ribonucleotide reductase large subunit, N-terminal JE55_RS06055 IPR002502 N-acetylmuramoyl-L-alanine amidase domain JE55_RS06065 IPR002541 Cytochrome c assembly protein JE55_RS06070 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JE55_RS06070 IPR003593 AAA+ ATPase domain JE55_RS06070 IPR004125 Signal recognition particle, SRP54 subunit, M-domain JE55_RS06070 IPR004780 Signal recognition particle protein Ffh JE55_RS06070 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle JE55_RS06070 IPR022941 Signal recognition particle, SRP54 subunit JE55_RS06070 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06075 IPR000836 Phosphoribosyltransferase domain JE55_RS06075 IPR029057 Phosphoribosyltransferase-like JE55_RS06080 IPR002771 Multiple antibiotic resistance (MarC)-related JE55_RS06085 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain JE55_RS06085 IPR002316 Proline-tRNA ligase, class IIa JE55_RS06085 IPR004154 Anticodon-binding JE55_RS06085 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type JE55_RS06085 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JE55_RS06085 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 JE55_RS06090 IPR000086 NUDIX hydrolase domain JE55_RS06090 IPR015797 NUDIX hydrolase domain-like JE55_RS06090 IPR020084 NUDIX hydrolase, conserved site JE55_RS06090 IPR020476 NUDIX hydrolase JE55_RS06090 IPR022927 RNA pyrophosphohydrolase RppH JE55_RS06095 IPR014861 Uncharacterised domain CNP1 JE55_RS06100 IPR001048 Aspartate/glutamate/uridylate kinase JE55_RS06100 IPR001057 Glutamate/acetylglutamate kinase JE55_RS06100 IPR002478 PUA domain JE55_RS06100 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase JE55_RS06100 IPR011529 Glutamate 5-kinase JE55_RS06100 IPR015947 PUA-like domain JE55_RS06100 IPR019797 Glutamate 5-kinase, conserved site JE55_RS06105 IPR006073 GTP binding domain JE55_RS06105 IPR006074 GTP1/OBG, conserved site JE55_RS06105 IPR006169 GTP1/OBG domain JE55_RS06105 IPR014100 GTP-binding protein Obg/CgtA JE55_RS06105 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06110 IPR001684 Ribosomal protein L27 JE55_RS06110 IPR018261 Ribosomal protein L27, conserved site JE55_RS06115 IPR001787 Ribosomal protein L21 JE55_RS06115 IPR018258 Ribosomal protein L21, conserved site JE55_RS06115 IPR028909 Ribosomal protein L21-like JE55_RS06120 IPR000092 Polyprenyl synthetase JE55_RS06120 IPR008949 Terpenoid synthase JE55_RS06120 IPR017446 Polyprenyl synthetase-related JE55_RS06130 IPR010751 TrfA JE55_RS06140 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY JE55_RS06150 IPR026866 Uncharacterised chromosomal cassette SCCmec type IVc protein CR006 JE55_RS06150 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06170 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JE55_RS06175 IPR002145 Ribbon-helix-helix protein, copG JE55_RS06175 IPR010985 Ribbon-helix-helix JE55_RS06180 IPR005094 Endonuclease relaxase, MobA/VirD2 JE55_RS06185 IPR002145 Ribbon-helix-helix protein, copG JE55_RS06195 IPR002104 Integrase, catalytic JE55_RS06195 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS06195 IPR013762 Integrase-like, catalytic core JE55_RS06195 IPR023109 Integrase/recombinase, N-terminal JE55_RS06200 IPR000644 CBS domain JE55_RS06200 IPR002550 Domain of unknown function DUF21 JE55_RS06200 IPR005170 Transporter-associated domain JE55_RS06200 IPR016166 FAD-binding, type 2 JE55_RS06200 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JE55_RS06205 IPR001482 Type II secretion system protein E JE55_RS06205 IPR003593 AAA+ ATPase domain JE55_RS06205 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06210 IPR001992 Type II secretion system conserved site JE55_RS06210 IPR003004 GspF/PilC family JE55_RS06210 IPR018076 Type II secretion system F domain JE55_RS06215 IPR000045 Prepilin type IV endopeptidase, peptidase domain JE55_RS06215 IPR010627 Peptidase A24A, N-terminal JE55_RS06215 IPR014032 Peptidase A24A, prepilin type IV, bacterial JE55_RS06220 IPR001977 Dephospho-CoA kinase JE55_RS06220 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06225 IPR009777 Cell division protein ZapD JE55_RS06225 IPR027462 Z ring-associated protein D, C-terminal domain JE55_RS06230 IPR005584 DNA gyrase inhibitor YacG JE55_RS06230 IPR013088 Zinc finger, NHR/GATA-type JE55_RS06235 IPR000086 NUDIX hydrolase domain JE55_RS06235 IPR015797 NUDIX hydrolase domain-like JE55_RS06235 IPR020084 NUDIX hydrolase, conserved site JE55_RS06235 IPR020476 NUDIX hydrolase JE55_RS06240 IPR003593 AAA+ ATPase domain JE55_RS06240 IPR008533 Domain of unknown function DUF815 JE55_RS06240 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06245 IPR002813 Arginine biosynthesis protein ArgJ JE55_RS06245 IPR016117 ArgJ-like domain JE55_RS06250 IPR000185 Protein translocase subunit SecA JE55_RS06250 IPR004027 SEC-C motif JE55_RS06250 IPR011115 SecA DEAD-like, N-terminal JE55_RS06250 IPR011116 SecA Wing/Scaffold JE55_RS06250 IPR011130 SecA preprotein, cross-linking domain JE55_RS06250 IPR020937 SecA conserved site JE55_RS06250 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06260 IPR007922 Protein of unknown function DUF721/UPF0232 JE55_RS06265 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase JE55_RS06265 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal JE55_RS06265 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal JE55_RS06265 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS06270 IPR012336 Thioredoxin-like fold JE55_RS06270 IPR013740 Redoxin JE55_RS06275 IPR000158 Cell division protein FtsZ JE55_RS06275 IPR003008 Tubulin/FtsZ, GTPase domain JE55_RS06275 IPR008280 Tubulin/FtsZ, C-terminal JE55_RS06275 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain JE55_RS06275 IPR020805 Cell division protein FtsZ, conserved site JE55_RS06275 IPR024757 Cell division protein FtsZ, C-terminal JE55_RS06280 IPR003494 SHS2 domain inserted in FtsA JE55_RS06280 IPR020823 Cell division protein FtsA JE55_RS06285 IPR005548 Cell division protein FtsQ/DivIB JE55_RS06285 IPR013685 Polypeptide-transport-associated, FtsQ-type JE55_RS06285 IPR026579 Cell division protein FtsQ JE55_RS06290 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site JE55_RS06290 IPR005905 D-alanine--D-alanine ligase JE55_RS06290 IPR011095 D-alanine--D-alanine ligase, C-terminal JE55_RS06290 IPR011127 D-alanine--D-alanine ligase, N-terminal domain JE55_RS06290 IPR013815 ATP-grasp fold, subdomain 1 JE55_RS06290 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS06290 IPR016185 Pre-ATP-grasp domain JE55_RS06295 IPR000713 Mur ligase, N-terminal JE55_RS06295 IPR004101 Mur ligase, C-terminal JE55_RS06295 IPR005758 UDP-N-acetylmuramate-alanine ligase JE55_RS06295 IPR013221 Mur ligase, central JE55_RS06295 IPR016040 NAD(P)-binding domain JE55_RS06300 IPR004276 Glycosyl transferase, family 28 JE55_RS06300 IPR006009 N-acetylglucosaminyltransferase, MurG JE55_RS06300 IPR007235 Glycosyl transferase, family 28, C-terminal JE55_RS06305 IPR001182 Cell cycle protein FtsW/RodA JE55_RS06305 IPR013437 Cell division protein FtsW JE55_RS06310 IPR004101 Mur ligase, C-terminal JE55_RS06310 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase JE55_RS06310 IPR013221 Mur ligase, central JE55_RS06310 IPR016040 NAD(P)-binding domain JE55_RS06315 IPR000715 Glycosyl transferase, family 4 JE55_RS06315 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase JE55_RS06315 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site JE55_RS06320 IPR000713 Mur ligase, N-terminal JE55_RS06320 IPR004101 Mur ligase, C-terminal JE55_RS06320 IPR005863 UDP-MurNAc-pentapeptide synthetase JE55_RS06320 IPR013221 Mur ligase, central JE55_RS06325 IPR000713 Mur ligase, N-terminal JE55_RS06325 IPR004101 Mur ligase, C-terminal JE55_RS06325 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase JE55_RS06325 IPR013221 Mur ligase, central JE55_RS06330 IPR001460 Penicillin-binding protein, transpeptidase JE55_RS06330 IPR005311 Penicillin-binding protein, dimerisation domain JE55_RS06330 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS06335 IPR011922 Cell division protein FtsL JE55_RS06335 IPR016040 NAD(P)-binding domain JE55_RS06340 IPR002903 Ribosomal RNA small subunit methyltransferase H JE55_RS06340 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain JE55_RS06340 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS06345 IPR003444 MraZ JE55_RS06345 IPR020603 MraZ domain JE55_RS06350 IPR009078 Ferritin-like superfamily JE55_RS06350 IPR011566 Ubiquinone biosynthesis protein Coq7 JE55_RS06350 IPR012347 Ferritin-related JE55_RS06355 IPR001702 Porin, Gram-negative type JE55_RS06355 IPR002299 Porin, Neisseria sp. type JE55_RS06355 IPR023614 Porin domain JE55_RS06360 IPR000873 AMP-dependent synthetase/ligase JE55_RS06360 IPR020845 AMP-binding, conserved site JE55_RS06360 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS06365 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site JE55_RS06365 IPR006656 Molybdopterin oxidoreductase JE55_RS06365 IPR006657 Molydopterin dinucleotide-binding domain JE55_RS06365 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain JE55_RS06365 IPR009010 Aspartate decarboxylase-like domain JE55_RS06395 IPR001753 Crotonase superfamily JE55_RS06395 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site JE55_RS06395 IPR029045 ClpP/crotonase-like domain JE55_RS06400 IPR011975 Phenylacetic acid degradation protein PaaN2 JE55_RS06400 IPR015590 Aldehyde dehydrogenase domain JE55_RS06400 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS06400 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS06400 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS06405 IPR002155 Thiolase JE55_RS06405 IPR012793 Beta-ketoadipyl CoA thiolase JE55_RS06405 IPR016039 Thiolase-like JE55_RS06405 IPR020610 Thiolase, active site JE55_RS06405 IPR020613 Thiolase, conserved site JE55_RS06405 IPR020615 Thiolase, acyl-enzyme intermediate active site JE55_RS06405 IPR020616 Thiolase, N-terminal JE55_RS06405 IPR020617 Thiolase, C-terminal JE55_RS06410 IPR001753 Crotonase superfamily JE55_RS06410 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB JE55_RS06410 IPR014748 Crontonase, C-terminal JE55_RS06410 IPR029045 ClpP/crotonase-like domain JE55_RS06415 IPR003736 Phenylacetic acid degradation-related domain JE55_RS06415 IPR006683 Thioesterase superfamily JE55_RS06415 IPR011973 Phenylacetic acid degradation protein PaaD JE55_RS06415 IPR029069 HotDog domain JE55_RS06420 IPR000873 AMP-dependent synthetase/ligase JE55_RS06420 IPR011880 Phenylacetate-CoA ligase JE55_RS06420 IPR028154 AMP-dependent ligase, C-terminal JE55_RS06425 IPR005300 Lytic transglycosylase MltA JE55_RS06425 IPR009009 RlpA-like double-psi beta-barrel domain JE55_RS06425 IPR010611 3D domain JE55_RS06425 IPR026044 Membrane-bound lytic murein transglycosylase A JE55_RS06435 IPR007474 ApaG domain JE55_RS06435 IPR023065 Uncharacterised protein family ApaG JE55_RS06440 IPR000056 Ribulose-phosphate 3-epimerase-like JE55_RS06440 IPR011060 Ribulose-phosphate binding barrel JE55_RS06440 IPR013785 Aldolase-type TIM barrel JE55_RS06440 IPR026019 Ribulose-phosphate 3-epimerase JE55_RS06445 IPR006346 2-phosphoglycolate phosphatase, prokaryotic JE55_RS06445 IPR006439 HAD hydrolase, subfamily IA JE55_RS06445 IPR023198 Phosphoglycolate phosphatase, domain 2 JE55_RS06445 IPR023214 HAD-like domain JE55_RS06450 IPR005256 Anthranilate synthase component I, PabB-like JE55_RS06450 IPR005801 ADC synthase JE55_RS06450 IPR006805 Anthranilate synthase component I, N-terminal JE55_RS06450 IPR015890 Chorismate binding, C-terminal JE55_RS06450 IPR019999 Anthranilate synthase component I - like JE55_RS06455 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain JE55_RS06455 IPR017926 Glutamine amidotransferase JE55_RS06455 IPR029062 Class I glutamine amidotransferase-like JE55_RS06460 IPR000312 Glycosyl transferase, family 3 JE55_RS06460 IPR005940 Anthranilate phosphoribosyl transferase JE55_RS06460 IPR017459 Glycosyl transferase family 3, N-terminal domain JE55_RS06465 IPR001468 Indole-3-glycerol phosphate synthase, conserved site JE55_RS06465 IPR011060 Ribulose-phosphate binding barrel JE55_RS06465 IPR013785 Aldolase-type TIM barrel JE55_RS06465 IPR013798 Indole-3-glycerol phosphate synthase JE55_RS06470 IPR023577 CYTH-like domain JE55_RS06470 IPR033469 JE55_RS06470 JE55_RS06475 IPR002043 Uracil-DNA glycosylase JE55_RS06475 IPR005122 Uracil-DNA glycosylase-like JE55_RS06475 IPR018085 Uracil-DNA glycosylase, active site JE55_RS06480 IPR003680 Flavodoxin-like fold JE55_RS06480 IPR023048 NADH-azoreductase, FMN-dependent JE55_RS06480 IPR029039 Flavoprotein-like JE55_RS06485 IPR001478 PDZ domain JE55_RS06485 IPR007963 Peptidase M61, catalytic domain JE55_RS06485 IPR024191 Peptidase M61 JE55_RS06490 IPR009094 Disulphide bond isomerase, DsbC, N-terminal JE55_RS06490 IPR012336 Thioredoxin-like fold JE55_RS06490 IPR017937 Thioredoxin, conserved site JE55_RS06490 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal JE55_RS06495 IPR002938 Monooxygenase, FAD-binding JE55_RS06495 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 JE55_RS06495 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site JE55_RS06495 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS06510 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 JE55_RS06510 IPR006073 GTP binding domain JE55_RS06510 IPR012675 Beta-grasp domain JE55_RS06510 IPR012676 TGS-like JE55_RS06510 IPR013029 Domain of unknown function DUF933 JE55_RS06510 IPR023192 TGS-like domain JE55_RS06510 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06525 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit JE55_RS06525 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit JE55_RS06530 IPR009057 Homeodomain-like JE55_RS06530 IPR018060 DNA binding HTH domain, AraC-type JE55_RS06535 IPR002293 Amino acid/polyamine transporter I JE55_RS06535 IPR004840 Amino acid permease, conserved site JE55_RS06535 IPR004841 Amino acid permease/ SLC12A domain JE55_RS06535 IPR011265 GABA permease JE55_RS06545 IPR004129 Glycerophosphoryl diester phosphodiesterase JE55_RS06545 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain JE55_RS06545 IPR030395 JE55_RS06545 JE55_RS06550 IPR022236 Protein of unknown function DUF3761 JE55_RS06560 IPR003439 ABC transporter-like JE55_RS06560 IPR003593 AAA+ ATPase domain JE55_RS06560 IPR017871 ABC transporter, conserved site JE55_RS06560 IPR022374 ABC transporter, ATP-binding protein, ChvD JE55_RS06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06560 IPR032781 JE55_RS06560 JE55_RS06565 IPR006439 HAD hydrolase, subfamily IA JE55_RS06565 IPR023214 HAD-like domain JE55_RS06570 IPR000868 Isochorismatase-like JE55_RS06580 IPR000587 Creatinase, N-terminal JE55_RS06580 IPR000994 Peptidase M24, structural domain JE55_RS06580 IPR028980 Creatinase/Aminopeptidase P, N-terminal JE55_RS06580 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JE55_RS06580 IPR032416 JE55_RS06580 JE55_RS06600 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase JE55_RS06600 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JE55_RS06600 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal JE55_RS06600 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain JE55_RS06600 IPR016040 NAD(P)-binding domain JE55_RS06600 IPR018214 Glutamyl-tRNA reductase, conserved site JE55_RS06605 IPR000352 Peptide chain release factor class I/class II JE55_RS06605 IPR004373 Peptide chain release factor 1 JE55_RS06605 IPR005139 Peptide chain release factor JE55_RS06605 IPR014720 Double-stranded RNA-binding domain JE55_RS06610 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JE55_RS06610 IPR004556 Modification methylase HemK JE55_RS06610 IPR007848 Methyltransferase small domain JE55_RS06610 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific JE55_RS06610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS06615 IPR002109 Glutaredoxin JE55_RS06615 IPR004480 Monothiol glutaredoxin-related JE55_RS06615 IPR012336 Thioredoxin-like fold JE55_RS06615 IPR014434 Monothiol glutaredoxin JE55_RS06620 IPR003382 Flavoprotein JE55_RS06620 IPR004507 Decarboxylase UbiX/Pad1 JE55_RS06625 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B JE55_RS06625 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type JE55_RS06630 IPR002293 Amino acid/polyamine transporter I JE55_RS06635 IPR002059 Cold-shock protein, DNA-binding JE55_RS06635 IPR011129 Cold shock protein JE55_RS06635 IPR012156 Cold shock, CspA JE55_RS06635 IPR012340 Nucleic acid-binding, OB-fold JE55_RS06635 IPR019844 Cold-shock conserved site JE55_RS06640 IPR013126 Heat shock protein 70 family JE55_RS06645 IPR000415 Nitroreductase-like JE55_RS06645 IPR029479 Nitroreductase JE55_RS06650 IPR011701 Major facilitator superfamily JE55_RS06650 IPR020846 Major facilitator superfamily domain JE55_RS06655 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS06655 IPR009057 Homeodomain-like JE55_RS06655 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS06655 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS06660 IPR009858 Protein of unknown function DUF1415 JE55_RS06665 IPR025714 Methyltransferase domain JE55_RS06665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS06670 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JE55_RS06670 IPR007848 Methyltransferase small domain JE55_RS06670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS06675 IPR002656 Acyltransferase 3 JE55_RS06685 IPR004864 Late embryogenesis abundant protein, LEA-14 JE55_RS06685 IPR013783 Immunoglobulin-like fold JE55_RS06685 IPR013990 Water stress and hypersensitive response domain JE55_RS06690 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase JE55_RS06690 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal JE55_RS06705 IPR003997 RTX secretion protein D, Gram-negative bacteria JE55_RS06710 IPR003439 ABC transporter-like JE55_RS06710 IPR003593 AAA+ ATPase domain JE55_RS06710 IPR005074 Peptidase C39, bacteriocin processing JE55_RS06710 IPR011527 ABC transporter type 1, transmembrane domain JE55_RS06710 IPR017871 ABC transporter, conserved site JE55_RS06710 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06715 IPR003423 Outer membrane efflux protein JE55_RS06715 IPR028351 Cyclolysin transport protein CyaE JE55_RS06725 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain JE55_RS06730 IPR009612 ImcF-related JE55_RS06730 IPR010623 Domain of unknown function DUF1215 JE55_RS06730 IPR017731 Type VI secretion system, IcmF JE55_RS06730 IPR025743 ImcF-related, N-terminal domain JE55_RS06730 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06735 IPR017748 Type VI secretion system-associated, BMAA0400 JE55_RS06740 IPR006664 Outer membrane protein, bacterial JE55_RS06740 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JE55_RS06745 IPR010657 ImpA, N-terminal JE55_RS06745 IPR017740 Type VI secretion system-associated, ImpA JE55_RS06750 IPR001270 ClpA/B family JE55_RS06750 IPR003593 AAA+ ATPase domain JE55_RS06750 IPR003959 ATPase, AAA-type, core JE55_RS06750 IPR004176 Clp, N-terminal JE55_RS06750 IPR017729 Type VI secretion system, ATPase ClpV1 JE55_RS06750 IPR018368 ClpA/B, conserved site 1 JE55_RS06750 IPR019489 Clp ATPase, C-terminal JE55_RS06750 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06755 IPR010732 Protein of unknown function DUF1305 JE55_RS06760 IPR010272 Type VI secretion system, VCA0110 JE55_RS06765 IPR007048 GpW/Gp25/anti-adapter protein IraD JE55_RS06765 IPR017737 Type VI secretion system, lysozyme-related protein JE55_RS06770 IPR008514 Type VI secretion system effector, Hcp JE55_RS06775 IPR010269 Protein of unknown function DUF877 JE55_RS06780 IPR008312 Uncharacterised conserved protein UCP028301 JE55_RS06785 IPR011990 Tetratricopeptide-like helical domain JE55_RS06790 IPR017734 Type VI secretion system, lipoprotein SciN JE55_RS06795 IPR010263 Protein of unknown function DUF876 JE55_RS06800 IPR017732 Type IV / VI secretion system, DotU JE55_RS06805 IPR006522 Phage virion morphogensis protein JE55_RS06810 IPR001091 Restriction/modification DNA-methylase JE55_RS06810 IPR002941 DNA methylase N-4/N-6 JE55_RS06810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS06815 IPR006521 Tail protein I JE55_RS06825 IPR002589 Macro domain JE55_RS06830 IPR031009 JE55_RS06830 JE55_RS06845 IPR014059 Conjugative relaxase, N-terminal JE55_RS06845 IPR014862 TrwC relaxase JE55_RS06845 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06860 IPR007688 Conjugal transfer, TrbL/VirB6 JE55_RS06870 IPR014158 Type IV secretion system, VirB5 JE55_RS06870 IPR023220 Type IV secretion system, VirB5-domain JE55_RS06890 IPR002104 Integrase, catalytic JE55_RS06890 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS06890 IPR013762 Integrase-like, catalytic core JE55_RS06890 IPR023109 Integrase/recombinase, N-terminal JE55_RS06900 IPR007481 Stringent starvation protein B JE55_RS06905 IPR004045 Glutathione S-transferase, N-terminal JE55_RS06905 IPR004046 Glutathione S-transferase, C-terminal JE55_RS06905 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS06905 IPR012336 Thioredoxin-like fold JE55_RS06910 IPR002326 Cytochrome c1 JE55_RS06910 IPR009056 Cytochrome c-like domain JE55_RS06915 IPR005798 Cytochrome b/b6, C-terminal JE55_RS06915 IPR016174 Di-haem cytochrome, transmembrane JE55_RS06915 IPR027387 Cytochrome b/b6-like domain JE55_RS06915 IPR030689 JE55_RS06915 JE55_RS06920 IPR005805 Rieske iron-sulphur protein, C-terminal JE55_RS06920 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit JE55_RS06920 IPR014349 Rieske iron-sulphur protein JE55_RS06920 IPR017941 Rieske [2Fe-2S] iron-sulphur domain JE55_RS06920 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal JE55_RS06925 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JE55_RS06930 IPR001478 PDZ domain JE55_RS06930 IPR001940 Peptidase S1C JE55_RS06930 IPR009003 Trypsin-like cysteine/serine peptidase domain JE55_RS06930 IPR011782 Peptidase S1C, Do JE55_RS06940 IPR002033 Sec-independent periplasmic protein translocase TatC JE55_RS06945 IPR003369 Sec-independent protein translocase protein TatA/B/E JE55_RS06945 IPR003998 Twin-arginine translocation protein TatB-like JE55_RS06945 IPR018448 Twin-arginine translocation protein TatB JE55_RS06950 IPR003369 Sec-independent protein translocase protein TatA/B/E JE55_RS06950 IPR006312 Sec-independent protein translocase protein TatA/E JE55_RS06955 IPR001310 Histidine triad (HIT) protein JE55_RS06955 IPR011146 HIT-like domain JE55_RS06965 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase JE55_RS06965 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like JE55_RS06970 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain JE55_RS06970 IPR026660 Phosphoribosyl-AMP cyclohydrolase JE55_RS06975 IPR004651 Histidine biosynthesis, HisF JE55_RS06975 IPR006062 Histidine biosynthesis JE55_RS06975 IPR011060 Ribulose-phosphate binding barrel JE55_RS06975 IPR013785 Aldolase-type TIM barrel JE55_RS06980 IPR006062 Histidine biosynthesis JE55_RS06980 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA JE55_RS06980 IPR011060 Ribulose-phosphate binding barrel JE55_RS06980 IPR013785 Aldolase-type TIM barrel JE55_RS06980 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase JE55_RS06985 IPR010139 Imidazole glycerol phosphate synthase, subunit H JE55_RS06985 IPR017926 Glutamine amidotransferase JE55_RS06985 IPR029062 Class I glutamine amidotransferase-like JE55_RS06990 IPR002771 Multiple antibiotic resistance (MarC)-related JE55_RS06995 IPR000807 Imidazoleglycerol-phosphate dehydratase JE55_RS06995 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site JE55_RS06995 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS07000 IPR004839 Aminotransferase, class I/classII JE55_RS07000 IPR005861 Histidinol-phosphate aminotransferase family JE55_RS07000 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS07000 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS07000 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS07005 IPR001692 Histidinol dehydrogenase, conserved site JE55_RS07005 IPR012131 Histidinol dehydrogenase JE55_RS07005 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS07005 IPR022695 Histidinol dehydrogenase, monofunctional JE55_RS07010 IPR001348 ATP phosphoribosyltransferase HisG JE55_RS07010 IPR013820 ATP phosphoribosyltransferase, catalytic domain JE55_RS07010 IPR018198 ATP phosphoribosyltransferase, conserved site JE55_RS07010 IPR024893 ATP phosphoribosyltransferase HisG, short form JE55_RS07015 IPR001986 Enolpyruvate transferase domain JE55_RS07015 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase JE55_RS07015 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JE55_RS07020 IPR002634 BolA protein JE55_RS07025 IPR000412 ABC-2 transporter JE55_RS07025 IPR013525 ABC-2 type transporter JE55_RS07030 IPR003439 ABC transporter-like JE55_RS07030 IPR003593 AAA+ ATPase domain JE55_RS07030 IPR017871 ABC transporter, conserved site JE55_RS07030 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07035 IPR002645 STAS domain JE55_RS07040 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC JE55_RS07040 IPR023094 Toluene tolerance protein, alpha-helical JE55_RS07040 IPR032710 JE55_RS07040 JE55_RS07045 IPR007428 VacJ-like lipoprotein JE55_RS07050 IPR003399 Mammalian cell entry-related JE55_RS07050 IPR030970 JE55_RS07050 JE55_RS07055 IPR003453 Permease domain JE55_RS07055 IPR030802 JE55_RS07055 JE55_RS07060 IPR003439 ABC transporter-like JE55_RS07060 IPR003593 AAA+ ATPase domain JE55_RS07060 IPR017871 ABC transporter, conserved site JE55_RS07060 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07065 IPR003733 Thiamine phosphate synthase JE55_RS07065 IPR013785 Aldolase-type TIM barrel JE55_RS07065 IPR022998 Thiamin phosphate synthase superfamily JE55_RS07070 IPR008867 Thiazole biosynthesis JE55_RS07070 IPR013785 Aldolase-type TIM barrel JE55_RS07075 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 JE55_RS07075 IPR010035 ThiS, thiamine-biosynthesis JE55_RS07075 IPR012675 Beta-grasp domain JE55_RS07075 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JE55_RS07080 IPR006076 FAD dependent oxidoreductase JE55_RS07080 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS07085 IPR003439 ABC transporter-like JE55_RS07085 IPR003593 AAA+ ATPase domain JE55_RS07085 IPR011527 ABC transporter type 1, transmembrane domain JE55_RS07085 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07095 IPR004175 2',5' RNA ligase JE55_RS07095 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase JE55_RS07100 IPR001463 Sodium:alanine symporter JE55_RS07105 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 JE55_RS07105 IPR009051 Alpha-helical ferredoxin JE55_RS07105 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS07105 IPR028261 Dihydroprymidine dehydrogenase domain II JE55_RS07110 IPR002489 Glutamate synthase, alpha subunit, C-terminal JE55_RS07110 IPR002932 Glutamate synthase domain JE55_RS07110 IPR006982 Glutamate synthase, central-N JE55_RS07110 IPR013785 Aldolase-type TIM barrel JE55_RS07110 IPR017932 Glutamine amidotransferase type 2 domain JE55_RS07110 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS07115 IPR002686 Transposase IS200-like JE55_RS07120 IPR005618 Outer membrane protein, OmpW JE55_RS07120 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel JE55_RS07125 IPR004129 Glycerophosphoryl diester phosphodiesterase JE55_RS07125 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain JE55_RS07125 IPR030395 JE55_RS07125 JE55_RS07130 IPR003439 ABC transporter-like JE55_RS07130 IPR003593 AAA+ ATPase domain JE55_RS07130 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS07130 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07130 IPR013611 Transport-associated OB, type 2 JE55_RS07130 IPR017871 ABC transporter, conserved site JE55_RS07130 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07135 IPR000515 MetI-like domain JE55_RS07135 IPR030165 JE55_RS07135 JE55_RS07140 IPR000515 MetI-like domain JE55_RS07145 IPR006061 Bacterial extracellular solute-binding family 1, conserved site JE55_RS07150 IPR003607 HD/PDEase domain JE55_RS07150 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase JE55_RS07150 IPR006674 HD domain JE55_RS07150 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 JE55_RS07150 IPR026875 Phosphohydrolase-associated domain JE55_RS07155 IPR016037 3-dehydroquinate synthase AroB JE55_RS07155 IPR030960 JE55_RS07155 JE55_RS07155 IPR030963 JE55_RS07155 JE55_RS07160 IPR000623 Shikimate kinase/Threonine synthase-like 1 JE55_RS07160 IPR023000 Shikimate kinase, conserved site JE55_RS07160 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07160 IPR031322 JE55_RS07160 JE55_RS07165 IPR001775 GspD/PilQ family JE55_RS07165 IPR004846 Type II/III secretion system JE55_RS07165 IPR005644 NolW-like JE55_RS07165 IPR011662 Secretin/TonB, short N-terminal JE55_RS07165 IPR013355 Type IV pilus secretin PilQ JE55_RS07180 IPR005883 Type IV pilus assembly protein PilM JE55_RS07185 IPR001264 Glycosyl transferase, family 51 JE55_RS07185 IPR001460 Penicillin-binding protein, transpeptidase JE55_RS07185 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS07185 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07185 IPR023346 Lysozyme-like domain JE55_RS07185 IPR031376 JE55_RS07185 JE55_RS07190 IPR002908 Frataxin/CyaY JE55_RS07190 IPR020895 Frataxin conserved site JE55_RS07195 IPR032831 JE55_RS07195 JE55_RS07200 IPR000183 Ornithine/DAP/Arg decarboxylase JE55_RS07200 IPR002986 Diaminopimelate decarboxylase, LysA JE55_RS07200 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JE55_RS07200 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal JE55_RS07200 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal JE55_RS07200 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site JE55_RS07200 IPR029066 PLP-binding barrel JE55_RS07205 IPR013130 Ferric reductase transmembrane component-like domain JE55_RS07205 IPR022837 Sulphoxide reductase heme-binding subunit YedZ JE55_RS07210 IPR000572 Oxidoreductase, molybdopterin-binding domain JE55_RS07210 IPR022867 Sulphoxide reductase catalytic subunit YedY JE55_RS07215 IPR002541 Cytochrome c assembly protein JE55_RS07215 IPR017562 Cytochrome c-type biogenesis protein CcsA JE55_RS07220 IPR007816 ResB-like domain JE55_RS07225 IPR008168 Cytochrome c, class IC JE55_RS07225 IPR009056 Cytochrome c-like domain JE55_RS07225 IPR024167 Cytochrome c4 JE55_RS07230 IPR006073 GTP binding domain JE55_RS07230 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC JE55_RS07230 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07235 IPR001731 Porphobilinogen synthase JE55_RS07235 IPR013785 Aldolase-type TIM barrel JE55_RS07235 IPR030656 JE55_RS07235 JE55_RS07240 IPR003834 Cytochrome c assembly protein, transmembrane domain JE55_RS07240 IPR012336 Thioredoxin-like fold JE55_RS07240 IPR017937 Thioredoxin, conserved site JE55_RS07240 IPR022910 Thiol:disulphide interchange protein DsbD JE55_RS07240 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain JE55_RS07245 IPR004323 Divalent ion tolerance protein, CutA JE55_RS07245 IPR011322 Nitrogen regulatory PII-like, alpha/beta JE55_RS07250 IPR000456 Ribosomal protein L17 JE55_RS07255 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain JE55_RS07255 IPR011260 RNA polymerase, alpha subunit, C-terminal JE55_RS07255 IPR011262 DNA-directed RNA polymerase, insert domain JE55_RS07255 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type JE55_RS07255 IPR011773 DNA-directed RNA polymerase, alpha subunit JE55_RS07260 IPR001912 Ribosomal protein S4/S9, N-terminal JE55_RS07260 IPR002942 RNA-binding S4 domain JE55_RS07260 IPR005709 Ribosomal protein S4, bacterial-type JE55_RS07260 IPR018079 Ribosomal protein S4, conserved site JE55_RS07260 IPR022801 Ribosomal protein S4/S9 JE55_RS07265 IPR001971 Ribosomal protein S11 JE55_RS07265 IPR018102 Ribosomal S11, conserved site JE55_RS07265 IPR019981 Ribosomal protein S11, bacterial-type JE55_RS07270 IPR001892 Ribosomal protein S13 JE55_RS07270 IPR010979 Ribosomal protein S13-like, H2TH JE55_RS07270 IPR018269 Ribosomal protein S13, conserved site JE55_RS07270 IPR019980 Ribosomal protein S13, bacterial-type JE55_RS07270 IPR027437 30s ribosomal protein S13, C-terminal JE55_RS07275 IPR000473 Ribosomal protein L36 JE55_RS07280 IPR004368 Translation initiation factor IF-1 JE55_RS07280 IPR006196 RNA-binding domain, S1, IF1 type JE55_RS07280 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07280 IPR022967 RNA-binding domain, S1 JE55_RS07285 IPR002208 SecY/SEC61-alpha family JE55_RS07285 IPR023201 SecY subunit domain JE55_RS07285 IPR026593 Protein translocase subunit SecY JE55_RS07285 IPR030659 JE55_RS07285 JE55_RS07290 IPR001196 Ribosomal protein L15, conserved site JE55_RS07290 IPR005749 Ribosomal protein L15, bacterial-type JE55_RS07290 IPR021131 Ribosomal protein L18e/L15P JE55_RS07290 IPR030878 JE55_RS07290 JE55_RS07295 IPR005996 Ribosomal protein L30, bacterial-type JE55_RS07295 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain JE55_RS07300 IPR000851 Ribosomal protein S5 JE55_RS07300 IPR005324 Ribosomal protein S5, C-terminal JE55_RS07300 IPR005712 Ribosomal protein S5, bacterial-type JE55_RS07300 IPR013810 Ribosomal protein S5, N-terminal JE55_RS07300 IPR014720 Double-stranded RNA-binding domain JE55_RS07300 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS07300 IPR018192 Ribosomal protein S5, N-terminal, conserved site JE55_RS07300 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS07305 IPR004389 Ribosomal protein L18, bacterial-type JE55_RS07305 IPR005484 Ribosomal protein L18/L5 JE55_RS07310 IPR000702 Ribosomal protein L6 JE55_RS07310 IPR002358 Ribosomal protein L6, conserved site JE55_RS07310 IPR019906 Ribosomal protein L6, bacterial-type JE55_RS07310 IPR020040 Ribosomal protein L6, alpha-beta domain JE55_RS07315 IPR000630 Ribosomal protein S8 JE55_RS07320 IPR001209 Ribosomal protein S14 JE55_RS07320 IPR023036 Ribosomal protein S14, bacterial/plastid JE55_RS07325 IPR002132 Ribosomal protein L5 JE55_RS07325 IPR020929 Ribosomal protein L5, conserved site JE55_RS07325 IPR020930 Ribosomal protein L5, bacterial-type JE55_RS07325 IPR022803 Ribosomal protein L5 domain JE55_RS07325 IPR031309 JE55_RS07325 JE55_RS07325 IPR031310 JE55_RS07325 JE55_RS07330 IPR003256 Ribosomal protein L24 JE55_RS07330 IPR005825 Ribosomal protein L24/L26, conserved site JE55_RS07330 IPR008991 Translation protein SH3-like domain JE55_RS07330 IPR014722 Ribosomal protein L2 domain 2 JE55_RS07335 IPR000218 Ribosomal protein L14b/L23e JE55_RS07335 IPR005745 Ribosomal protein L14, bacterial-type JE55_RS07335 IPR019972 Ribosomal protein L14 conserved site JE55_RS07340 IPR000266 Ribosomal protein S17 JE55_RS07340 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07340 IPR019979 Ribosomal protein S17, conserved site JE55_RS07340 IPR019984 Ribosomal protein S17, bacterial-type JE55_RS07345 IPR001854 Ribosomal protein L29 JE55_RS07345 IPR018254 Ribosomal protein L29, conserved site JE55_RS07350 IPR000114 Ribosomal protein L16 JE55_RS07350 IPR016180 Ribosomal protein L10e/L16 JE55_RS07350 IPR020798 Ribosomal protein L16, conserved site JE55_RS07355 IPR001351 Ribosomal protein S3, C-terminal JE55_RS07355 IPR004044 K Homology domain, type 2 JE55_RS07355 IPR004087 K Homology domain JE55_RS07355 IPR005704 Ribosomal protein S3, bacterial JE55_RS07355 IPR009019 K homology domain, prokaryotic type JE55_RS07355 IPR015946 K homology domain-like, alpha/beta JE55_RS07355 IPR018280 Ribosomal protein S3, conserved site JE55_RS07360 IPR001063 Ribosomal protein L22/L17 JE55_RS07360 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type JE55_RS07360 IPR018260 Ribosomal protein L22/L17, conserved site JE55_RS07365 IPR002222 Ribosomal protein S19/S15 JE55_RS07365 IPR005732 Ribosomal protein S19, bacterial-type JE55_RS07365 IPR020934 Ribosomal protein S19 conserved site JE55_RS07365 IPR023575 Ribosomal protein S19, superfamily JE55_RS07370 IPR002171 Ribosomal protein L2 JE55_RS07370 IPR005880 Ribosomal protein L2, bacterial/organellar-type JE55_RS07370 IPR008991 Translation protein SH3-like domain JE55_RS07370 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07370 IPR014722 Ribosomal protein L2 domain 2 JE55_RS07370 IPR014726 Ribosomal protein L2, domain 3 JE55_RS07370 IPR022666 Ribosomal Proteins L2, RNA binding domain JE55_RS07370 IPR022669 Ribosomal protein L2, C-terminal JE55_RS07370 IPR022671 Ribosomal protein L2, conserved site JE55_RS07375 IPR012677 Nucleotide-binding, alpha-beta plait JE55_RS07375 IPR012678 Ribosomal protein L23/L15e core domain JE55_RS07375 IPR013025 Ribosomal protein L25/L23 JE55_RS07380 IPR002136 Ribosomal protein L4/L1e JE55_RS07380 IPR013005 Ribosomal protein L4/L1e, bacterial-type JE55_RS07380 IPR023574 Ribosomal protein L4 domain JE55_RS07385 IPR000597 Ribosomal protein L3 JE55_RS07385 IPR009000 Translation protein, beta-barrel domain JE55_RS07385 IPR019926 Ribosomal protein L3, conserved site JE55_RS07385 IPR019927 Ribosomal protein L3, bacterial/organelle-type JE55_RS07390 IPR001848 Ribosomal protein S10 JE55_RS07390 IPR018268 Ribosomal protein S10, conserved site JE55_RS07390 IPR027486 Ribosomal protein S10 domain JE55_RS07395 IPR000795 Elongation factor, GTP-binding domain JE55_RS07395 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JE55_RS07395 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 JE55_RS07395 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle JE55_RS07395 IPR005225 Small GTP-binding protein domain JE55_RS07395 IPR009000 Translation protein, beta-barrel domain JE55_RS07395 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JE55_RS07395 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07395 IPR031157 JE55_RS07395 JE55_RS07400 IPR000640 Translation elongation factor EFG, V domain JE55_RS07400 IPR000795 Elongation factor, GTP-binding domain JE55_RS07400 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 JE55_RS07400 IPR004540 Translation elongation factor EFG/EF2 JE55_RS07400 IPR005225 Small GTP-binding protein domain JE55_RS07400 IPR005517 Translation elongation factor EFG/EF2, domain IV JE55_RS07400 IPR009000 Translation protein, beta-barrel domain JE55_RS07400 IPR009022 Elongation factor G, III-V domain JE55_RS07400 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS07400 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS07400 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07400 IPR031157 JE55_RS07400 JE55_RS07405 IPR000235 Ribosomal protein S5/S7 JE55_RS07405 IPR005717 Ribosomal protein S7, bacterial/organellar-type JE55_RS07405 IPR020606 Ribosomal protein S7, conserved site JE55_RS07405 IPR023798 Ribosomal protein S7 domain JE55_RS07410 IPR005679 Ribosomal protein S12, bacteria JE55_RS07410 IPR006032 Ribosomal protein S12/S23 JE55_RS07410 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07415 IPR001650 Helicase, C-terminal JE55_RS07415 IPR002121 HRDC domain JE55_RS07415 IPR004589 DNA helicase, ATP-dependent, RecQ type JE55_RS07415 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial JE55_RS07415 IPR010997 HRDC-like JE55_RS07415 IPR011545 DEAD/DEAH box helicase domain JE55_RS07415 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07415 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JE55_RS07415 IPR018982 RQC domain JE55_RS07415 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07415 IPR032284 JE55_RS07415 JE55_RS07420 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 JE55_RS07420 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger JE55_RS07420 IPR032877 JE55_RS07420 JE55_RS07425 IPR000722 RNA polymerase, alpha subunit JE55_RS07425 IPR006592 RNA polymerase, N-terminal JE55_RS07425 IPR007066 RNA polymerase Rpb1, domain 3 JE55_RS07425 IPR007080 RNA polymerase Rpb1, domain 1 JE55_RS07425 IPR007081 RNA polymerase Rpb1, domain 5 JE55_RS07425 IPR007083 RNA polymerase Rpb1, domain 4 JE55_RS07425 IPR012754 DNA-directed RNA polymerase, subunit beta-prime JE55_RS07430 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 JE55_RS07430 IPR007121 RNA polymerase, beta subunit, conserved site JE55_RS07430 IPR007641 RNA polymerase Rpb2, domain 7 JE55_RS07430 IPR007642 RNA polymerase Rpb2, domain 2 JE55_RS07430 IPR007644 RNA polymerase, beta subunit, protrusion JE55_RS07430 IPR007645 RNA polymerase Rpb2, domain 3 JE55_RS07430 IPR010243 DNA-directed RNA polymerase, beta subunit JE55_RS07430 IPR014724 RNA polymerase Rpb2, OB-fold JE55_RS07430 IPR015712 DNA-directed RNA polymerase, subunit 2 JE55_RS07430 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain JE55_RS07435 IPR000206 Ribosomal protein L7/L12 JE55_RS07435 IPR008932 Ribosomal protein L7/L12, oligomerisation JE55_RS07435 IPR013823 Ribosomal protein L7/L12, C-terminal JE55_RS07435 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JE55_RS07440 IPR001790 Ribosomal protein L10/acidic P0 JE55_RS07440 IPR022973 Ribosomal protein L10 JE55_RS07445 IPR002143 Ribosomal protein L1 JE55_RS07445 IPR005878 Ribosomal protein L1, bacterial-type JE55_RS07445 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich JE55_RS07445 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich JE55_RS07445 IPR023673 Ribosomal protein L1, conserved site JE55_RS07445 IPR023674 Ribosomal protein L1-like JE55_RS07445 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein JE55_RS07450 IPR000911 Ribosomal protein L11/L12 JE55_RS07450 IPR006519 Ribosomal protein L11, bacterial-type JE55_RS07450 IPR020783 Ribosomal protein L11, C-terminal JE55_RS07450 IPR020784 Ribosomal protein L11, N-terminal JE55_RS07450 IPR020785 Ribosomal protein L11, conserved site JE55_RS07455 IPR001062 Transcription antitermination protein, NusG JE55_RS07455 IPR005824 KOW JE55_RS07455 IPR006645 NusG, N-terminal JE55_RS07455 IPR008991 Translation protein SH3-like domain JE55_RS07455 IPR014722 Ribosomal protein L2 domain 2 JE55_RS07455 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site JE55_RS07460 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit JE55_RS07460 IPR005807 SecE subunit of protein translocation complex JE55_RS07460 IPR022943 Preprotein translocase subunit SecE JE55_RS07470 IPR000795 Elongation factor, GTP-binding domain JE55_RS07470 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JE55_RS07470 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 JE55_RS07470 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle JE55_RS07470 IPR005225 Small GTP-binding protein domain JE55_RS07470 IPR009000 Translation protein, beta-barrel domain JE55_RS07470 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JE55_RS07470 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07470 IPR031157 JE55_RS07470 JE55_RS07515 IPR013830 JE55_RS07515 JE55_RS07520 IPR007814 Phenylacetic acid catabolic JE55_RS07520 IPR009078 Ferritin-like superfamily JE55_RS07520 IPR011881 Phenylacetate-CoA oxygenase, PaaG subunit JE55_RS07520 IPR012347 Ferritin-related JE55_RS07525 IPR009359 Phenylacetic acid degradation B JE55_RS07530 IPR007814 Phenylacetic acid catabolic JE55_RS07530 IPR009078 Ferritin-like superfamily JE55_RS07530 IPR011882 Phenylacetate-CoA oxygenase, PaaI subunit JE55_RS07530 IPR012347 Ferritin-related JE55_RS07535 IPR002744 Domain of unknown function DUF59 JE55_RS07535 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit JE55_RS07540 IPR001041 2Fe-2S ferredoxin-type domain JE55_RS07540 IPR001433 Oxidoreductase FAD/NAD(P)-binding JE55_RS07540 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase JE55_RS07540 IPR001834 NADH:cytochrome b5 reductase (CBR) JE55_RS07540 IPR008333 Oxidoreductase, FAD-binding domain JE55_RS07540 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit JE55_RS07540 IPR012675 Beta-grasp domain JE55_RS07540 IPR017938 Riboflavin synthase-like beta-barrel JE55_RS07545 IPR014973 Protein of unknown function DUF1835 JE55_RS07545 IPR022123 Protein of unknown function DUF3658 JE55_RS07550 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS07550 IPR009057 Homeodomain-like JE55_RS07550 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS07550 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS07555 IPR000182 GNAT domain JE55_RS07555 IPR016181 Acyl-CoA N-acyltransferase JE55_RS07560 IPR000485 AsnC-type HTH domain JE55_RS07560 IPR011008 Dimeric alpha-beta barrel JE55_RS07560 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07560 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JE55_RS07560 IPR019887 Transcription regulator AsnC-type, C-terminal JE55_RS07560 IPR019888 Transcription regulator AsnC-type JE55_RS07565 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JE55_RS07565 IPR005956 4-hydroxyphenylpyruvate dioxygenase JE55_RS07565 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS07575 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain JE55_RS07575 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JE55_RS07575 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain JE55_RS07575 IPR029061 Thiamin diphosphate-binding fold JE55_RS07580 IPR001891 Malic oxidoreductase JE55_RS07580 IPR002505 Phosphate acetyl/butaryl transferase JE55_RS07580 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase JE55_RS07580 IPR012301 Malic enzyme, N-terminal domain JE55_RS07580 IPR012302 Malic enzyme, NAD-binding JE55_RS07580 IPR016040 NAD(P)-binding domain JE55_RS07585 IPR000836 Phosphoribosyltransferase domain JE55_RS07585 IPR004467 Orotate phosphoribosyl transferase domain JE55_RS07585 IPR023031 Orotate phosphoribosyltransferase JE55_RS07585 IPR029057 Phosphoribosyltransferase-like JE55_RS07590 IPR005247 YbhB/YbcL JE55_RS07590 IPR008914 Phosphatidylethanolamine-binding protein PEBP JE55_RS07595 IPR001226 Flavodoxin, conserved site JE55_RS07595 IPR005025 NADPH-dependent FMN reductase-like JE55_RS07595 IPR029039 Flavoprotein-like JE55_RS07600 IPR000534 Semialdehyde dehydrogenase, NAD-binding JE55_RS07600 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 JE55_RS07600 IPR016040 NAD(P)-binding domain JE55_RS07605 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 JE55_RS07605 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger JE55_RS07605 IPR032877 JE55_RS07605 JE55_RS07610 IPR021340 Protein of unknown function DUF2957 JE55_RS07615 IPR021340 Protein of unknown function DUF2957 JE55_RS07620 IPR005618 Outer membrane protein, OmpW JE55_RS07620 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel JE55_RS07625 IPR000847 Transcription regulator HTH, LysR JE55_RS07625 IPR005119 LysR, substrate-binding JE55_RS07625 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07630 IPR011701 Major facilitator superfamily JE55_RS07630 IPR020846 Major facilitator superfamily domain JE55_RS07635 IPR001123 Lysine-type exporter protein (LYSE/YGGA) JE55_RS07640 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding JE55_RS07640 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS07640 IPR013328 Dehydrogenase, multihelical JE55_RS07640 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type JE55_RS07640 IPR016040 NAD(P)-binding domain JE55_RS07640 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain JE55_RS07645 IPR002782 Mut7-C RNAse domain JE55_RS07645 IPR012675 Beta-grasp domain JE55_RS07645 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JE55_RS07645 IPR027798 Ubiquitin Mut7-C domain JE55_RS07670 IPR002293 Amino acid/polyamine transporter I JE55_RS07670 IPR004840 Amino acid permease, conserved site JE55_RS07670 IPR004841 Amino acid permease/ SLC12A domain JE55_RS07675 IPR002104 Integrase, catalytic JE55_RS07675 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS07675 IPR013762 Integrase-like, catalytic core JE55_RS07675 IPR023109 Integrase/recombinase, N-terminal JE55_RS07690 IPR018306 Bacteriophage T5, Orf172 DNA-binding JE55_RS07695 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS07715 IPR019726 Protein of unknown function DUF2604 JE55_RS07720 IPR025873 Metal binding domain, predicted JE55_RS07725 IPR020232 Uncharacterised protein family, Y4jG, transmembrane JE55_RS07725 IPR028090 JAB domain, prokaryotic JE55_RS07730 IPR000594 UBA/THIF-type NAD/FAD binding fold JE55_RS07730 IPR016040 NAD(P)-binding domain JE55_RS07730 IPR032864 JE55_RS07730 JE55_RS07735 IPR002716 PIN domain JE55_RS07735 IPR029060 PIN domain-like JE55_RS07740 IPR010093 Excisionase/Xis, DNA-binding JE55_RS07750 IPR002104 Integrase, catalytic JE55_RS07750 IPR004107 Integrase, SAM-like, N-terminal JE55_RS07750 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS07750 IPR013762 Integrase-like, catalytic core JE55_RS07750 IPR023109 Integrase/recombinase, N-terminal JE55_RS07760 IPR002514 Transposase IS3/IS911family JE55_RS07760 IPR009057 Homeodomain-like JE55_RS07765 IPR001584 Integrase, catalytic core JE55_RS07765 IPR012337 Ribonuclease H-like domain JE55_RS07765 IPR025948 HTH-like domain JE55_RS07780 IPR002324 Cytochrome c, class ID JE55_RS07780 IPR009056 Cytochrome c-like domain JE55_RS07785 IPR007055 BON domain JE55_RS07785 IPR014004 Transport-associated and nodulation domain, bacteria JE55_RS07790 IPR001347 Sugar isomerase (SIS) JE55_RS07795 IPR003509 Uncharacterised protein family UPF0102 JE55_RS07795 IPR011335 Restriction endonuclease type II-like JE55_RS07795 IPR011856 tRNA endonuclease-like domain JE55_RS07800 IPR000878 Tetrapyrrole methylase JE55_RS07800 IPR008189 rRNA small subunit methyltransferase I JE55_RS07800 IPR014776 Tetrapyrrole methylase, subdomain 2 JE55_RS07800 IPR014777 Tetrapyrrole methylase, subdomain 1 JE55_RS07800 IPR018063 SAM-dependent methyltransferase RsmI, conserved site JE55_RS07805 IPR009009 RlpA-like double-psi beta-barrel domain JE55_RS07805 IPR012997 Rare lipoprotein A, bacterial JE55_RS07810 IPR001279 Beta-lactamase-like JE55_RS07815 IPR012337 Ribonuclease H-like domain JE55_RS07820 IPR000485 AsnC-type HTH domain JE55_RS07820 IPR011008 Dimeric alpha-beta barrel JE55_RS07820 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07820 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JE55_RS07820 IPR019887 Transcription regulator AsnC-type, C-terminal JE55_RS07820 IPR019888 Transcription regulator AsnC-type JE55_RS07825 IPR002524 Cation efflux protein JE55_RS07825 IPR027469 Cation efflux protein transmembrane domain JE55_RS07825 IPR027470 Cation efflux protein cytoplasmic domain JE55_RS07830 IPR001801 Histone-like protein H-NS JE55_RS07830 IPR027444 Histone-like protein H-NS, C-terminal domain JE55_RS07835 IPR012349 FMN-binding split barrel JE55_RS07840 IPR011701 Major facilitator superfamily JE55_RS07840 IPR020846 Major facilitator superfamily domain JE55_RS07845 IPR000709 Leu/Ile/Val-binding protein JE55_RS07845 IPR028081 Leucine-binding protein domain JE55_RS07845 IPR028082 Periplasmic binding protein-like I JE55_RS07850 IPR004136 2-nitropropane dioxygenase, NPD JE55_RS07850 IPR013785 Aldolase-type TIM barrel JE55_RS07855 IPR002925 Dienelactone hydrolase JE55_RS07855 IPR029058 Alpha/Beta hydrolase fold JE55_RS07860 IPR000120 Amidase JE55_RS07860 IPR020556 Amidase, conserved site JE55_RS07860 IPR023631 Amidase signature domain JE55_RS07865 IPR003171 Methylenetetrahydrofolate reductase JE55_RS07865 IPR004620 5,10-methylenetetrahydrofolate reductase JE55_RS07865 IPR029041 FAD-linked oxidoreductase-like JE55_RS07870 IPR007165 Membrane protein of unknown function JE55_RS07875 IPR000043 Adenosylhomocysteinase JE55_RS07875 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JE55_RS07875 IPR016040 NAD(P)-binding domain JE55_RS07875 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site JE55_RS07880 IPR000943 RNA polymerase sigma-70 JE55_RS07880 IPR007624 RNA polymerase sigma-70 region 3 JE55_RS07880 IPR007627 RNA polymerase sigma-70 region 2 JE55_RS07880 IPR007630 RNA polymerase sigma-70 region 4 JE55_RS07880 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07880 IPR012845 RNA polymerase sigma factor, FliA/WhiG JE55_RS07880 IPR013324 RNA polymerase sigma factor, region 3/4 JE55_RS07880 IPR013325 RNA polymerase sigma factor, region 2 JE55_RS07880 IPR014284 RNA polymerase sigma-70 like domain JE55_RS07880 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE JE55_RS07880 IPR028617 RNA polymerase sigma factor FliA JE55_RS07885 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS07885 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07890 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JE55_RS07890 IPR003593 AAA+ ATPase domain JE55_RS07890 IPR020006 Signal-recognition particle (SRP)-type GTPase JE55_RS07890 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07895 IPR001712 Type III secretion system FHIPEP JE55_RS07895 IPR006301 Flagellar biosynthesis protein FlhA JE55_RS07895 IPR025505 FHIPEP conserved site JE55_RS07900 IPR006135 Type III secretion system substrate exporter JE55_RS07900 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB JE55_RS07900 IPR029025 Type III secretion system substrate exporter, C-terminal JE55_RS07905 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase JE55_RS07905 IPR028973 3-demethylubiquinone-9 3-methyltransferase JE55_RS07905 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS07910 IPR021847 Protein of unknown function DUF3443 JE55_RS07915 IPR021267 Protein of unknown function DUF2844 JE55_RS07920 IPR007439 Chemotaxis phosphatase, CheZ JE55_RS07925 IPR001789 Signal transduction response regulator, receiver domain JE55_RS07925 IPR011006 CheY-like superfamily JE55_RS07930 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase JE55_RS07930 IPR001789 Signal transduction response regulator, receiver domain JE55_RS07930 IPR008248 Signal transduction response regulator, chemotaxis, CheB JE55_RS07930 IPR011006 CheY-like superfamily JE55_RS07935 IPR005659 Chemoreceptor glutamine deamidase CheD JE55_RS07935 IPR011324 Cytotoxic necrotizing factor-like, catalytic JE55_RS07940 IPR000780 MCP methyltransferase, CheR-type JE55_RS07940 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal JE55_RS07940 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal JE55_RS07940 IPR026024 Chemotaxis protein methyltransferase CheR JE55_RS07940 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS07945 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding JE55_RS07945 IPR003660 HAMP linker domain JE55_RS07945 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JE55_RS07945 IPR004090 Chemotaxis methyl-accepting receptor JE55_RS07950 IPR002545 CheW-like protein JE55_RS07955 IPR002545 CheW-like protein JE55_RS07955 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS07955 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS07955 IPR004105 Histidine kinase CheA-like, homodimeric domain JE55_RS07955 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS07955 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JE55_RS07955 IPR015162 CheY binding JE55_RS07960 IPR001789 Signal transduction response regulator, receiver domain JE55_RS07960 IPR011006 CheY-like superfamily JE55_RS07965 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JE55_RS07965 IPR025713 Motility protein B, N-terminal domain JE55_RS07970 IPR000540 Flagellar motor protein MotA, conserved site JE55_RS07970 IPR002898 MotA/TolQ/ExbB proton channel JE55_RS07970 IPR022522 Flagellar motor stator, MotA JE55_RS07975 IPR007944 Flagellar transcriptional activator FlhC JE55_RS07980 IPR023559 Flagellar transcriptional activator FlhD JE55_RS07985 IPR001296 Glycosyl transferase, family 1 JE55_RS07985 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain JE55_RS07990 IPR001801 Histone-like protein H-NS JE55_RS07990 IPR027444 Histone-like protein H-NS, C-terminal domain JE55_RS07995 IPR000425 Major intrinsic protein JE55_RS07995 IPR022357 Major intrinsic protein, conserved site JE55_RS07995 IPR023271 Aquaporin-like JE55_RS07995 IPR023743 Aquaporin Z JE55_RS08000 IPR000150 Cof protein JE55_RS08000 IPR006379 HAD-superfamily hydrolase, subfamily IIB JE55_RS08000 IPR023214 HAD-like domain JE55_RS08005 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type JE55_RS08010 IPR005019 Methyladenine glycosylase JE55_RS08010 IPR011257 DNA glycosylase JE55_RS08015 IPR001911 Ribosomal protein S21 JE55_RS08020 IPR001029 Flagellin, D0/D1 domain JE55_RS08020 IPR001492 Flagellin JE55_RS08020 IPR022578 Flagellin, domain of unknown function JE55_RS08025 IPR003481 Flagellar hook-associated protein 2, N-terminal JE55_RS08025 IPR005427 Salmonella/Shigella invasin protein C JE55_RS08025 IPR010809 Flagellar hook-associated 2, C-terminal JE55_RS08025 IPR010810 Flagellin hook, IN motif JE55_RS08030 IPR008622 Flagellar protein FliT JE55_RS08035 IPR011990 Tetratricopeptide-like helical domain JE55_RS08035 IPR019734 Tetratricopeptide repeat JE55_RS08035 IPR029489 O-GlcNAc transferase, C-terminal JE55_RS08040 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JE55_RS08040 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS08040 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS08040 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS08045 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal JE55_RS08045 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JE55_RS08045 IPR016039 Thiolase-like JE55_RS08050 IPR009081 Acyl carrier protein-like JE55_RS08055 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal JE55_RS08055 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JE55_RS08055 IPR016039 Thiolase-like JE55_RS08060 IPR002347 Glucose/ribitol dehydrogenase JE55_RS08060 IPR016040 NAD(P)-binding domain JE55_RS08060 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS08065 IPR001451 Bacterial transferase hexapeptide repeat JE55_RS08065 IPR011004 Trimeric LpxA-like JE55_RS08065 IPR016185 Pre-ATP-grasp domain JE55_RS08065 IPR020019 Sialic acid O-acyltransferase, NeuD JE55_RS08070 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain JE55_RS08070 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site JE55_RS08070 IPR017941 Rieske [2Fe-2S] iron-sulphur domain JE55_RS08075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS08090 IPR001123 Lysine-type exporter protein (LYSE/YGGA) JE55_RS08095 IPR007312 Phosphoesterase JE55_RS08095 IPR017768 Acid phosphatase, AcpA JE55_RS08095 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha JE55_RS08095 IPR017850 Alkaline-phosphatase-like, core domain JE55_RS08105 IPR008517 Protein of unknown function DUF799 JE55_RS08110 IPR014508 Uncharacterised conserved protein, TPR-like repeat JE55_RS08115 IPR005534 Curli production assembly/transport component CsgG JE55_RS08115 IPR007195 TolB, N-terminal JE55_RS08125 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS08125 IPR000639 Epoxide hydrolase-like JE55_RS08125 IPR029058 Alpha/Beta hydrolase fold JE55_RS08130 IPR003660 HAMP linker domain JE55_RS08130 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JE55_RS08130 IPR004090 Chemotaxis methyl-accepting receptor JE55_RS08130 IPR029151 Periplasmic sensor domain-like JE55_RS08130 IPR033479 JE55_RS08130 JE55_RS08140 IPR006094 FAD linked oxidase, N-terminal JE55_RS08140 IPR012951 Berberine/berberine-like JE55_RS08140 IPR016166 FAD-binding, type 2 JE55_RS08140 IPR016167 FAD-binding, type 2, subdomain 1 JE55_RS08145 IPR004302 Chitin-binding, domain 3 JE55_RS08145 IPR014756 Immunoglobulin E-set JE55_RS08150 IPR025528 Protein of unknown function DUF4415 JE55_RS08155 IPR021815 Protein of unknown function DUF3396 JE55_RS08165 IPR008727 PAAR motif JE55_RS08180 IPR002104 Integrase, catalytic JE55_RS08180 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS08180 IPR013762 Integrase-like, catalytic core JE55_RS08190 IPR002323 Cytochrome c, class IE JE55_RS08190 IPR009056 Cytochrome c-like domain JE55_RS08195 IPR000212 DNA helicase, UvrD/REP type JE55_RS08195 IPR005752 DNA helicase, ATP-dependent, RepA type JE55_RS08195 IPR013986 DExx box DNA helicase domain JE55_RS08195 IPR014016 UvrD-like Helicase, ATP-binding domain JE55_RS08195 IPR014017 DNA helicase, UvrD-like, C-terminal JE55_RS08195 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08205 IPR013830 JE55_RS08205 JE55_RS08210 IPR000683 Oxidoreductase, N-terminal JE55_RS08210 IPR004104 Oxidoreductase, C-terminal JE55_RS08210 IPR016040 NAD(P)-binding domain JE55_RS08220 IPR006222 Glycine cleavage T-protein, N-terminal JE55_RS08220 IPR006223 Glycine cleavage system T protein JE55_RS08220 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain JE55_RS08220 IPR022903 Glycine cleavage system T protein, bacteria JE55_RS08220 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 JE55_RS08220 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA JE55_RS08220 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain JE55_RS08225 IPR002930 Glycine cleavage system H-protein JE55_RS08225 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JE55_RS08225 IPR011053 Single hybrid motif JE55_RS08225 IPR017453 Glycine cleavage system H-protein, subgroup JE55_RS08230 IPR003437 Glycine cleavage system P protein, homodimeric JE55_RS08230 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS08230 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS08230 IPR020580 Glycine cleavage system P-protein, N-terminal JE55_RS08230 IPR020581 Glycine cleavage system P protein JE55_RS08235 IPR008397 Alginate lyase domain JE55_RS08235 IPR008929 Chondroitin AC/alginate lyase JE55_RS08240 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form JE55_RS08240 IPR005130 Serine dehydratase-like, alpha subunit JE55_RS08240 IPR005131 Serine dehydratase beta chain JE55_RS08240 IPR029009 Allosteric substrate binding domain JE55_RS08250 IPR000399 TPP-binding enzyme, conserved site JE55_RS08250 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JE55_RS08250 IPR012000 Thiamine pyrophosphate enzyme, central domain JE55_RS08250 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JE55_RS08250 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS08250 IPR029061 Thiamin diphosphate-binding fold JE55_RS08260 IPR009057 Homeodomain-like JE55_RS08260 IPR018060 DNA binding HTH domain, AraC-type JE55_RS08265 IPR015590 Aldehyde dehydrogenase domain JE55_RS08265 IPR016160 Aldehyde dehydrogenase, cysteine active site JE55_RS08265 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS08265 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS08265 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS08265 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JE55_RS08275 IPR009246 Ethanolamine ammonia-lyase light chain JE55_RS08280 IPR010628 Ethanolamine ammonia lyase large subunit JE55_RS08280 IPR013785 Aldolase-type TIM barrel JE55_RS08285 IPR002293 Amino acid/polyamine transporter I JE55_RS08285 IPR004757 Ethanolamine permease JE55_RS08295 IPR002656 Acyltransferase 3 JE55_RS08305 IPR008910 Conserved TM helix JE55_RS08315 IPR025874 Double zinc ribbon JE55_RS08320 IPR001757 Cation-transporting P-type ATPase JE55_RS08320 IPR006121 Heavy metal-associated domain, HMA JE55_RS08320 IPR008250 P-type ATPase, A domain JE55_RS08320 IPR018303 P-type ATPase, phosphorylation site JE55_RS08320 IPR023214 HAD-like domain JE55_RS08320 IPR023299 P-type ATPase, cytoplasmic domain N JE55_RS08320 IPR027256 Cation-transporting P-type ATPase, subfamily IB JE55_RS08325 IPR000551 MerR-type HTH domain JE55_RS08325 IPR009061 DNA binding domain, putative JE55_RS08325 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator JE55_RS08330 IPR005149 Transcription regulator PadR N-terminal JE55_RS08330 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08335 IPR004113 FAD-linked oxidase, C-terminal JE55_RS08335 IPR016164 FAD-linked oxidase-like, C-terminal JE55_RS08335 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JE55_RS08345 IPR001638 Extracellular solute-binding protein, family 3 JE55_RS08345 IPR018313 Extracellular solute-binding protein, family 3, conserved site JE55_RS08350 IPR004839 Aminotransferase, class I/classII JE55_RS08350 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS08350 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS08350 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS08355 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS08355 IPR009057 Homeodomain-like JE55_RS08355 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS08355 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS08355 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JE55_RS08360 IPR006089 Acyl-CoA dehydrogenase, conserved site JE55_RS08360 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS08360 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS08360 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS08365 IPR000873 AMP-dependent synthetase/ligase JE55_RS08365 IPR020845 AMP-binding, conserved site JE55_RS08365 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS08370 IPR000709 Leu/Ile/Val-binding protein JE55_RS08370 IPR028081 Leucine-binding protein domain JE55_RS08370 IPR028082 Periplasmic binding protein-like I JE55_RS08375 IPR002872 Proline dehydrogenase domain JE55_RS08375 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 JE55_RS08375 IPR010985 Ribbon-helix-helix JE55_RS08375 IPR015590 Aldehyde dehydrogenase domain JE55_RS08375 IPR016160 Aldehyde dehydrogenase, cysteine active site JE55_RS08375 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS08375 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS08375 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS08375 IPR024082 Proline dehydrogenase PutA, domain II JE55_RS08375 IPR024089 Proline dehydrogenase PutA, domain I/II JE55_RS08375 IPR024090 Proline dehydrogenase PutA, domain I JE55_RS08375 IPR025703 Bifunctional protein PutA JE55_RS08375 IPR029041 FAD-linked oxidoreductase-like JE55_RS08385 IPR001650 Helicase, C-terminal JE55_RS08385 IPR005259 Primosomal protein n JE55_RS08385 IPR011545 DEAD/DEAH box helicase domain JE55_RS08385 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JE55_RS08385 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08390 IPR000257 Uroporphyrinogen decarboxylase (URO-D) JE55_RS08390 IPR006361 Uroporphyrinogen decarboxylase HemE JE55_RS08395 IPR001638 Extracellular solute-binding protein, family 3 JE55_RS08395 IPR018313 Extracellular solute-binding protein, family 3, conserved site JE55_RS08400 IPR003781 CoA-binding JE55_RS08400 IPR016040 NAD(P)-binding domain JE55_RS08405 IPR000873 AMP-dependent synthetase/ligase JE55_RS08405 IPR020845 AMP-binding, conserved site JE55_RS08405 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS08415 IPR001469 ATPase, F1 complex, delta/epsilon subunit JE55_RS08415 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal JE55_RS08415 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain JE55_RS08420 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JE55_RS08420 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal JE55_RS08420 IPR003593 AAA+ ATPase domain JE55_RS08420 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain JE55_RS08420 IPR005722 ATPase, F1 complex, beta subunit JE55_RS08420 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JE55_RS08420 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal JE55_RS08420 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08425 IPR000131 ATPase, F1 complex, gamma subunit JE55_RS08425 IPR023632 ATPase, F1 complex, gamma subunit conserved site JE55_RS08425 IPR023633 ATPase, F1 complex, gamma subunit domain JE55_RS08430 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JE55_RS08430 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal JE55_RS08430 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain JE55_RS08430 IPR005294 ATPase, F1 complex, alpha subunit JE55_RS08430 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JE55_RS08430 IPR023366 ATP synthase subunit alpha-like domain JE55_RS08430 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08435 IPR000711 ATPase, OSCP/delta subunit JE55_RS08435 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain JE55_RS08440 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast JE55_RS08440 IPR005864 ATPase, F0 complex, subunit B, bacterial JE55_RS08440 IPR028987 F-type ATP synthase subunit B-like, membrane domain JE55_RS08445 IPR000454 ATPase, F0 complex, subunit C JE55_RS08445 IPR002379 V-ATPase proteolipid subunit C-like domain JE55_RS08445 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast JE55_RS08445 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site JE55_RS08450 IPR000568 ATPase, F0 complex, subunit A JE55_RS08450 IPR023011 ATPase, F0 complex, subunit A, active site JE55_RS08455 IPR005598 ATP synthase protein I JE55_RS08460 IPR004680 Citrate transporter-like domain JE55_RS08465 IPR003115 ParB/Sulfiredoxin JE55_RS08465 IPR004437 ParB/RepB/Spo0J partition protein family JE55_RS08470 IPR025669 AAA domain JE55_RS08470 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08475 IPR003682 rRNA small subunit methyltransferase G JE55_RS08475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS08480 IPR002218 Glucose-inhibited division protein A-related JE55_RS08480 IPR004416 Glucose-inhibited division protein A JE55_RS08480 IPR020595 Glucose-inhibited division protein A-related, conserved site JE55_RS08480 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS08480 IPR026904 GidA associated domain 3 JE55_RS08485 IPR003439 ABC transporter-like JE55_RS08485 IPR003593 AAA+ ATPase domain JE55_RS08485 IPR017871 ABC transporter, conserved site JE55_RS08485 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08490 IPR001851 ABC transporter, permease JE55_RS08490 IPR003439 ABC transporter-like JE55_RS08490 IPR003593 AAA+ ATPase domain JE55_RS08490 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08490 IPR032823 JE55_RS08490 JE55_RS08495 IPR001851 ABC transporter, permease JE55_RS08500 IPR028081 Leucine-binding protein domain JE55_RS08500 IPR028082 Periplasmic binding protein-like I JE55_RS08510 IPR001851 ABC transporter, permease JE55_RS08515 IPR001851 ABC transporter, permease JE55_RS08520 IPR028081 Leucine-binding protein domain JE55_RS08520 IPR028082 Periplasmic binding protein-like I JE55_RS08525 IPR003439 ABC transporter-like JE55_RS08525 IPR003593 AAA+ ATPase domain JE55_RS08525 IPR017871 ABC transporter, conserved site JE55_RS08525 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08530 IPR003439 ABC transporter-like JE55_RS08530 IPR003593 AAA+ ATPase domain JE55_RS08530 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08530 IPR032823 JE55_RS08530 JE55_RS08535 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal JE55_RS08535 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal JE55_RS08535 IPR012132 Glucose-methanol-choline oxidoreductase JE55_RS08535 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS08540 IPR010061 Methylmalonate-semialdehyde dehydrogenase JE55_RS08540 IPR015590 Aldehyde dehydrogenase domain JE55_RS08540 IPR016160 Aldehyde dehydrogenase, cysteine active site JE55_RS08540 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS08540 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS08540 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS08545 IPR000847 Transcription regulator HTH, LysR JE55_RS08545 IPR005119 LysR, substrate-binding JE55_RS08545 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08550 IPR023577 CYTH-like domain JE55_RS08550 IPR033469 JE55_RS08550 JE55_RS08555 IPR000485 AsnC-type HTH domain JE55_RS08555 IPR011008 Dimeric alpha-beta barrel JE55_RS08555 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08555 IPR019887 Transcription regulator AsnC-type, C-terminal JE55_RS08555 IPR019888 Transcription regulator AsnC-type JE55_RS08560 IPR001273 Aromatic amino acid hydroxylase JE55_RS08560 IPR005960 Phenylalanine-4-hydroxylase, monomeric form JE55_RS08560 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site JE55_RS08560 IPR019774 Aromatic amino acid hydroxylase, C-terminal JE55_RS08565 IPR001533 Transcriptional coactivator/pterin dehydratase JE55_RS08570 IPR022191 Protein of unknown function DUF3717 JE55_RS08575 IPR001789 Signal transduction response regulator, receiver domain JE55_RS08575 IPR001867 Signal transduction response regulator, C-terminal JE55_RS08575 IPR011006 CheY-like superfamily JE55_RS08575 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08575 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS08580 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08580 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS08580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS08580 IPR013727 Two-component sensor kinase N-terminal JE55_RS08585 IPR001214 SET domain JE55_RS08595 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal JE55_RS08595 IPR013785 Aldolase-type TIM barrel JE55_RS08600 IPR017926 Glutamine amidotransferase JE55_RS08600 IPR029062 Class I glutamine amidotransferase-like JE55_RS08605 IPR000835 MarR-type HTH domain JE55_RS08605 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08610 IPR006336 Glutamate--cysteine ligase, GCS2 JE55_RS08610 IPR011793 Carboxylate-amine ligase, predicted JE55_RS08615 IPR006153 Cation/H+ exchanger JE55_RS08620 IPR006076 FAD dependent oxidoreductase JE55_RS08620 IPR008471 MnmC-like methyltransferase JE55_RS08620 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal JE55_RS08620 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC JE55_RS08620 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS08620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS08625 IPR000119 Histone-like bacterial DNA-binding protein JE55_RS08625 IPR010992 Integration host factor (IHF)-like DNA-binding domain JE55_RS08625 IPR020816 Histone-like DNA-binding protein, conserved site JE55_RS08630 IPR003495 CobW/HypB/UreG domain JE55_RS08630 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS08630 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08635 IPR008258 Lytic transglycosylase-like SLT domain JE55_RS08635 IPR023346 Lysozyme-like domain JE55_RS08640 IPR001775 GspD/PilQ family JE55_RS08640 IPR004846 Type II/III secretion system JE55_RS08640 IPR005644 NolW-like JE55_RS08640 IPR013356 Type II secretion system GspD JE55_RS08645 IPR001482 Type II secretion system protein E JE55_RS08645 IPR003593 AAA+ ATPase domain JE55_RS08645 IPR007831 General secretory system II, protein E, N-terminal JE55_RS08645 IPR013369 Type II secretion system GspE JE55_RS08645 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08650 IPR003004 GspF/PilC family JE55_RS08650 IPR011850 General secretion pathway protein F JE55_RS08650 IPR018076 Type II secretion system F domain JE55_RS08660 IPR000983 Bacterial general secretion pathway protein G-type pilin JE55_RS08660 IPR010054 General secretion pathway protein G JE55_RS08660 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08660 IPR013545 Type II secretion system protein G JE55_RS08665 IPR002416 Type II secretion system protein H JE55_RS08665 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08665 IPR022346 General secretion pathway, GspH JE55_RS08670 IPR003413 Type II secretion system protein I domain JE55_RS08670 IPR010052 Type II secretion system protein I JE55_RS08670 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08675 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08680 IPR005628 General secretion pathway protein K JE55_RS08685 IPR007812 Type II secretion system protein L JE55_RS08685 IPR024230 GspL, cytoplasmic actin-ATPase-like domain JE55_RS08685 IPR025691 GspL periplasmic domain JE55_RS08690 IPR007690 Type II secretion system, protein M JE55_RS08690 IPR023229 Type II secretion system protein M, periplasmic domain JE55_RS08695 IPR022792 Type II secretion system, protein N JE55_RS08700 IPR003423 Outer membrane efflux protein JE55_RS08700 IPR010131 RND efflux system, outer membrane lipoprotein, NodT JE55_RS08710 IPR000835 MarR-type HTH domain JE55_RS08710 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08710 IPR023187 Transcriptional regulator MarR-type, conserved site JE55_RS08715 IPR004638 Drug resistance transporter EmrB/QacA subfamily JE55_RS08715 IPR011701 Major facilitator superfamily JE55_RS08715 IPR020846 Major facilitator superfamily domain JE55_RS08720 IPR000847 Transcription regulator HTH, LysR JE55_RS08720 IPR005119 LysR, substrate-binding JE55_RS08720 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08725 IPR005538 LrgA/CidA family JE55_RS08730 IPR007300 CidB/LrgB family JE55_RS08735 IPR005503 Flagellar basal body-associated protein FliL JE55_RS08740 IPR001543 Surface presentation of antigen (SpoA) JE55_RS08740 IPR001689 Flagellar motor switch protein FliM JE55_RS08740 IPR028976 CheC-like domain JE55_RS08745 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb JE55_RS08745 IPR001543 Surface presentation of antigen (SpoA) JE55_RS08745 IPR012826 Flagellar motor switch FliN JE55_RS08750 IPR022781 Flagellar biosynthesis protein, FliO JE55_RS08755 IPR005837 Flagellar transport protein FliP JE55_RS08755 IPR005838 Type III secretion system inner membrane P protein JE55_RS08760 IPR002191 Bacterial export protein family 3 JE55_RS08760 IPR006305 Flagellar biosynthesis protein FliQ JE55_RS08765 IPR002010 Type III secretion system inner membrane R protein JE55_RS08765 IPR006303 Flagellar biosynthesis protein FliR JE55_RS08770 IPR000551 MerR-type HTH domain JE55_RS08770 IPR009061 DNA binding domain, putative JE55_RS08775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS08780 IPR021329 Protein of unknown function DUF2938 JE55_RS08785 IPR015168 SsuA/THI5-like JE55_RS08790 IPR003439 ABC transporter-like JE55_RS08790 IPR003593 AAA+ ATPase domain JE55_RS08790 IPR017871 ABC transporter, conserved site JE55_RS08790 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08795 IPR000515 MetI-like domain JE55_RS08800 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08800 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS08800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS08800 IPR013727 Two-component sensor kinase N-terminal JE55_RS08805 IPR001789 Signal transduction response regulator, receiver domain JE55_RS08805 IPR001867 Signal transduction response regulator, C-terminal JE55_RS08805 IPR011006 CheY-like superfamily JE55_RS08805 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08810 IPR002299 Porin, Neisseria sp. type JE55_RS08810 IPR023614 Porin domain JE55_RS08815 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JE55_RS08815 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class JE55_RS08815 IPR002941 DNA methylase N-4/N-6 JE55_RS08815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS08820 IPR006935 Helicase/UvrB domain JE55_RS08820 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08825 IPR002299 Porin, Neisseria sp. type JE55_RS08825 IPR023614 Porin domain JE55_RS08830 IPR003313 AraC-type arabinose-binding/dimerisation domain JE55_RS08830 IPR009057 Homeodomain-like JE55_RS08830 IPR014710 RmlC-like jelly roll fold JE55_RS08830 IPR018060 DNA binding HTH domain, AraC-type JE55_RS08830 IPR020449 Transcription regulator HTH, AraC- type JE55_RS08835 IPR003439 ABC transporter-like JE55_RS08835 IPR003593 AAA+ ATPase domain JE55_RS08835 IPR017871 ABC transporter, conserved site JE55_RS08835 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08840 IPR003439 ABC transporter-like JE55_RS08840 IPR003593 AAA+ ATPase domain JE55_RS08840 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08845 IPR001851 ABC transporter, permease JE55_RS08850 IPR001851 ABC transporter, permease JE55_RS08855 IPR028081 Leucine-binding protein domain JE55_RS08855 IPR028082 Periplasmic binding protein-like I JE55_RS08860 IPR015590 Aldehyde dehydrogenase domain JE55_RS08860 IPR016160 Aldehyde dehydrogenase, cysteine active site JE55_RS08860 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS08860 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS08860 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS08860 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JE55_RS08865 IPR009959 Polyketide cyclase SnoaL-like domain JE55_RS08865 IPR032710 JE55_RS08865 JE55_RS08870 IPR024724 Molybdenum cofactor biosynthesis protein F JE55_RS08875 IPR002347 Glucose/ribitol dehydrogenase JE55_RS08875 IPR016040 NAD(P)-binding domain JE55_RS08875 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS08880 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal JE55_RS08880 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal JE55_RS08880 IPR012132 Glucose-methanol-choline oxidoreductase JE55_RS08880 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS08885 IPR005149 Transcription regulator PadR N-terminal JE55_RS08885 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08890 IPR012963 Protein of unknown function DUF1700 JE55_RS08895 IPR005804 Fatty acid desaturase, type 1 JE55_RS08900 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08900 IPR012906 PaaX-like, N-terminal JE55_RS08900 IPR013225 PaaX-like, C-terminal JE55_RS08905 IPR009057 Homeodomain-like JE55_RS08905 IPR018060 DNA binding HTH domain, AraC-type JE55_RS08905 IPR029062 Class I glutamine amidotransferase-like JE55_RS08910 IPR006089 Acyl-CoA dehydrogenase, conserved site JE55_RS08910 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS08910 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS08910 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS08910 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JE55_RS08915 IPR002155 Thiolase JE55_RS08915 IPR016039 Thiolase-like JE55_RS08915 IPR020610 Thiolase, active site JE55_RS08915 IPR020613 Thiolase, conserved site JE55_RS08915 IPR020616 Thiolase, N-terminal JE55_RS08915 IPR020617 Thiolase, C-terminal JE55_RS08920 IPR001753 Crotonase superfamily JE55_RS08920 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal JE55_RS08920 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding JE55_RS08920 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS08920 IPR013328 Dehydrogenase, multihelical JE55_RS08920 IPR016040 NAD(P)-binding domain JE55_RS08920 IPR029045 ClpP/crotonase-like domain JE55_RS08925 IPR003673 CoA-transferase family III JE55_RS08925 IPR023606 CoA-transferase family III domain JE55_RS08960 IPR007627 RNA polymerase sigma-70 region 2 JE55_RS08960 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08960 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JE55_RS08960 IPR013324 RNA polymerase sigma factor, region 3/4 JE55_RS08960 IPR013325 RNA polymerase sigma factor, region 2 JE55_RS08960 IPR014284 RNA polymerase sigma-70 like domain JE55_RS08965 IPR011614 Catalase core domain JE55_RS08965 IPR018028 Catalase, mono-functional, haem-containing JE55_RS08965 IPR020835 Catalase-like domain JE55_RS08965 IPR024168 Catalase, SrpA-type, predicted JE55_RS08970 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase JE55_RS08970 IPR016174 Di-haem cytochrome, transmembrane JE55_RS08975 IPR000565 DNA topoisomerase, type IIA, subunit B JE55_RS08975 IPR001241 DNA topoisomerase, type IIA JE55_RS08975 IPR002288 DNA gyrase B subunit, C-terminal JE55_RS08975 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08975 IPR006171 Toprim domain JE55_RS08975 IPR011557 DNA gyrase, subunit B JE55_RS08975 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 JE55_RS08975 IPR013759 DNA topoisomerase, type IIA, central domain JE55_RS08975 IPR013760 DNA topoisomerase, type IIA-like domain JE55_RS08975 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS08975 IPR018522 DNA topoisomerase, type IIA, conserved site JE55_RS08975 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS08980 IPR001001 DNA polymerase III, beta chain JE55_RS08980 IPR022634 DNA polymerase III, beta chain, N-terminal JE55_RS08980 IPR022635 DNA polymerase III, beta chain, C-terminal JE55_RS08980 IPR022637 DNA polymerase III, beta chain, central JE55_RS08985 IPR001957 Chromosomal replication control, initiator DnaA JE55_RS08985 IPR003593 AAA+ ATPase domain JE55_RS08985 IPR010921 Trp repressor/replication initiator JE55_RS08985 IPR013159 Chromosomal replication initiator, DnaA C-terminal JE55_RS08985 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) JE55_RS08985 IPR018312 Chromosomal replication control, initiator DnaA, conserved site JE55_RS08985 IPR020591 Chromosomal replication control, initiator DnaA-like JE55_RS08985 IPR024633 DnaA N-terminal domain JE55_RS08985 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08990 IPR000271 Ribosomal protein L34 JE55_RS08990 IPR020939 Ribosomal protein L34, conserved site JE55_RS08995 IPR000100 Ribonuclease P JE55_RS08995 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS08995 IPR020539 Ribonuclease P, conserved site JE55_RS08995 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS09000 IPR002696 Putative membrane protein insertion efficiency factor JE55_RS09005 IPR001708 Membrane insertase OXA1/ALB3/YidC JE55_RS09005 IPR019998 Membrane insertase YidC JE55_RS09005 IPR028053 Membrane insertase YidC, N-terminal JE55_RS09005 IPR028055 Membrane insertase YidC/Oxa1, C-terminal JE55_RS09010 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS09015 IPR004520 tRNA modification GTPase MnmE JE55_RS09015 IPR005225 Small GTP-binding protein domain JE55_RS09015 IPR006073 GTP binding domain JE55_RS09015 IPR018948 GTP-binding protein TrmE, N-terminal JE55_RS09015 IPR025867 tRNA modification GTPase MnmE C-terminal domain JE55_RS09015 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 JE55_RS09015 IPR027368 tRNA modification GTPase MnmE domain 2 JE55_RS09015 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09020 IPR002104 Integrase, catalytic JE55_RS09020 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS09020 IPR013762 Integrase-like, catalytic core JE55_RS09020 IPR023109 Integrase/recombinase, N-terminal JE55_RS09020 IPR025166 Domain of unknown function DUF4102 JE55_RS09050 IPR006118 Recombinase, conserved site JE55_RS09050 IPR006119 Resolvase, N-terminal JE55_RS09050 IPR009057 Homeodomain-like JE55_RS09065 IPR025491 Domain of unknown function DUF4382 JE55_RS09080 IPR000182 GNAT domain JE55_RS09080 IPR016181 Acyl-CoA N-acyltransferase JE55_RS09090 IPR009822 YaeQ JE55_RS09090 IPR011335 Restriction endonuclease type II-like JE55_RS09095 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JE55_RS09095 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS09100 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site JE55_RS09100 IPR004026 Ada DNA repair, metal-binding JE55_RS09100 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain JE55_RS09100 IPR009057 Homeodomain-like JE55_RS09100 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09100 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding JE55_RS09100 IPR016221 Bifunctional regulatory protein Ada JE55_RS09100 IPR018060 DNA binding HTH domain, AraC-type JE55_RS09105 IPR003265 HhH-GPD domain JE55_RS09105 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal JE55_RS09105 IPR011257 DNA glycosylase JE55_RS09105 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JE55_RS09110 IPR006334 Glutamate--cysteine ligase, monofunctional JE55_RS09110 IPR007370 Glutamate--cysteine ligase JE55_RS09115 IPR000943 RNA polymerase sigma-70 JE55_RS09115 IPR007624 RNA polymerase sigma-70 region 3 JE55_RS09115 IPR007627 RNA polymerase sigma-70 region 2 JE55_RS09115 IPR007630 RNA polymerase sigma-70 region 4 JE55_RS09115 IPR009042 RNA polymerase sigma-70 region 1.2 JE55_RS09115 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09115 IPR013324 RNA polymerase sigma factor, region 3/4 JE55_RS09115 IPR013325 RNA polymerase sigma factor, region 2 JE55_RS09115 IPR014284 RNA polymerase sigma-70 like domain JE55_RS09130 IPR012899 LTXXQ motif family protein JE55_RS09135 IPR000847 Transcription regulator HTH, LysR JE55_RS09135 IPR005119 LysR, substrate-binding JE55_RS09135 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09140 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein JE55_RS09145 IPR000286 Histone deacetylase superfamily JE55_RS09145 IPR003084 Histone deacetylase JE55_RS09145 IPR023801 Histone deacetylase domain JE55_RS09150 IPR003010 Carbon-nitrogen hydrolase JE55_RS09150 IPR017755 N-carbamoylputrescine amidase JE55_RS09155 IPR006430 Phage portal protein, PBSX family JE55_RS09155 IPR006944 Bacteriophage/Gene transfer agent portal protein JE55_RS09155 IPR030935 JE55_RS09155 JE55_RS09165 IPR021225 Protein of unknown function DUF2778 JE55_RS09180 IPR003736 Phenylacetic acid degradation-related domain JE55_RS09180 IPR006683 Thioesterase superfamily JE55_RS09180 IPR029069 HotDog domain JE55_RS09185 IPR002641 Patatin/Phospholipase A2-related JE55_RS09185 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JE55_RS09190 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JE55_RS09190 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JE55_RS09190 IPR016040 NAD(P)-binding domain JE55_RS09195 IPR000847 Transcription regulator HTH, LysR JE55_RS09195 IPR005119 LysR, substrate-binding JE55_RS09195 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09200 IPR000380 DNA topoisomerase, type IA JE55_RS09200 IPR003601 DNA topoisomerase, type IA, domain 2 JE55_RS09200 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JE55_RS09200 IPR005738 DNA topoisomerase III JE55_RS09200 IPR006171 Toprim domain JE55_RS09200 IPR013497 DNA topoisomerase, type IA, central JE55_RS09200 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JE55_RS09200 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JE55_RS09200 IPR023405 DNA topoisomerase, type IA, core domain JE55_RS09200 IPR023406 DNA topoisomerase, type IA, active site JE55_RS09200 IPR025589 Topoisomerase C-terminal repeat JE55_RS09205 IPR012336 Thioredoxin-like fold JE55_RS09205 IPR013766 Thioredoxin domain JE55_RS09210 IPR003488 DNA recombination-mediator protein A JE55_RS09210 IPR010994 RuvA domain 2-like JE55_RS09210 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09215 IPR000181 Formylmethionine deformylase JE55_RS09215 IPR023635 Peptide deformylase JE55_RS09220 IPR001555 Phosphoribosylglycinamide formyltransferase, active site JE55_RS09220 IPR002376 Formyl transferase, N-terminal JE55_RS09220 IPR005793 Formyl transferase, C-terminal JE55_RS09220 IPR005794 Methionyl-tRNA formyltransferase JE55_RS09220 IPR011034 Formyl transferase, C-terminal-like JE55_RS09225 IPR001123 Lysine-type exporter protein (LYSE/YGGA) JE55_RS09230 IPR001915 Peptidase M48 JE55_RS09230 IPR022919 Peptidase M48, protease HtpX, putative JE55_RS09240 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p JE55_RS09240 IPR004573 rRNA small subunit methyltransferase B JE55_RS09240 IPR006027 NusB/RsmB/TIM44 JE55_RS09240 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site JE55_RS09240 IPR023267 RNA (C5-cytosine) methyltransferase JE55_RS09240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS09245 IPR025500 Protein of unknown function DUF4390 JE55_RS09250 IPR000014 PAS domain JE55_RS09250 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09250 IPR003660 HAMP linker domain JE55_RS09250 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS09250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS09250 IPR013656 PAS fold-4 JE55_RS09250 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator JE55_RS09255 IPR001789 Signal transduction response regulator, receiver domain JE55_RS09255 IPR002197 DNA binding HTH domain, Fis-type JE55_RS09255 IPR009057 Homeodomain-like JE55_RS09255 IPR011006 CheY-like superfamily JE55_RS09265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS09265 IPR018317 Queuosine biosynthesis protein QueC JE55_RS09270 IPR024924 7-carboxy-7-deazaguanine synthase-like JE55_RS09270 IPR030977 JE55_RS09270 JE55_RS09275 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein JE55_RS09280 IPR005000 HpcH/HpaI aldolase/citrate lyase domain JE55_RS09280 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JE55_RS09285 IPR006597 Sel1-like JE55_RS09285 IPR011990 Tetratricopeptide-like helical domain JE55_RS09290 IPR001182 Cell cycle protein FtsW/RodA JE55_RS09290 IPR011923 Rod shape-determining protein RodA JE55_RS09290 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site JE55_RS09295 IPR001460 Penicillin-binding protein, transpeptidase JE55_RS09295 IPR005311 Penicillin-binding protein, dimerisation domain JE55_RS09295 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS09295 IPR017790 Penicillin-binding protein 2 JE55_RS09300 IPR007227 Cell shape-determining protein MreD JE55_RS09300 IPR026034 Cell shape-determining protein MreD, proteobacterial type JE55_RS09305 IPR007221 Rod shape-determining protein MreC JE55_RS09310 IPR004753 Cell shape determining protein MreB/Mrl JE55_RS09315 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit JE55_RS09320 IPR000120 Amidase JE55_RS09320 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit JE55_RS09320 IPR020556 Amidase, conserved site JE55_RS09320 IPR023631 Amidase signature domain JE55_RS09325 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related JE55_RS09325 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit JE55_RS09325 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic JE55_RS09325 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site JE55_RS09325 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E JE55_RS09325 IPR018027 Asn/Gln amidotransferase JE55_RS09325 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal JE55_RS09330 IPR016898 Polyphosphate kinase 2 JE55_RS09330 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 JE55_RS09330 IPR022488 Polyphosphate kinase-2-related JE55_RS09330 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09335 IPR004808 AP endonuclease 1 JE55_RS09335 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS09345 IPR002085 Alcohol dehydrogenase superfamily, zinc-type JE55_RS09345 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site JE55_RS09345 IPR011032 GroES (chaperonin 10)-like JE55_RS09345 IPR013149 Alcohol dehydrogenase, C-terminal JE55_RS09345 IPR013154 Alcohol dehydrogenase GroES-like JE55_RS09345 IPR016040 NAD(P)-binding domain JE55_RS09345 IPR020843 Polyketide synthase, enoylreductase JE55_RS09345 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JE55_RS09350 IPR009057 Homeodomain-like JE55_RS09350 IPR009594 Transcription regulator HTH, AraC, N-terminal JE55_RS09350 IPR018060 DNA binding HTH domain, AraC-type JE55_RS09355 IPR001915 Peptidase M48 JE55_RS09360 IPR011701 Major facilitator superfamily JE55_RS09360 IPR020846 Major facilitator superfamily domain JE55_RS09365 IPR010743 Methionine biosynthesis MetW JE55_RS09365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS09370 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS09370 IPR008220 Homoserine acetyltransferase JE55_RS09370 IPR029058 Alpha/Beta hydrolase fold JE55_RS09375 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS09375 IPR009057 Homeodomain-like JE55_RS09375 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS09380 IPR006439 HAD hydrolase, subfamily IA JE55_RS09380 IPR010237 Pyrimidine 5-nucleotidase JE55_RS09380 IPR023214 HAD-like domain JE55_RS09385 IPR001048 Aspartate/glutamate/uridylate kinase JE55_RS09385 IPR004662 Acetylglutamate kinase JE55_RS09390 IPR032720 JE55_RS09390 JE55_RS09395 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09395 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS09395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS09400 IPR001789 Signal transduction response regulator, receiver domain JE55_RS09400 IPR002197 DNA binding HTH domain, Fis-type JE55_RS09400 IPR009057 Homeodomain-like JE55_RS09400 IPR011006 CheY-like superfamily JE55_RS09405 IPR003593 AAA+ ATPase domain JE55_RS09405 IPR003959 ATPase, AAA-type, core JE55_RS09405 IPR004491 Heat shock protein HslU JE55_RS09405 IPR019489 Clp ATPase, C-terminal JE55_RS09405 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09410 IPR001353 Proteasome, subunit alpha/beta JE55_RS09410 IPR022281 ATP-dependent protease, HslV subunit JE55_RS09410 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS09415 IPR000962 Zinc finger, DksA/TraR C4-type JE55_RS09415 IPR012784 RNA polymerase-binding transcription factor DksA JE55_RS09415 IPR020458 Zinc finger, DksA/TraR C4-type conserved site JE55_RS09420 IPR003495 CobW/HypB/UreG domain JE55_RS09420 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS09420 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09425 IPR002478 PUA domain JE55_RS09425 IPR015947 PUA-like domain JE55_RS09425 IPR019614 S-adenosylmethionine-dependent methyltransferase JE55_RS09425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS09430 IPR002104 Integrase, catalytic JE55_RS09430 IPR004107 Integrase, SAM-like, N-terminal JE55_RS09430 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS09430 IPR011931 Tyrosine recombinase XerC JE55_RS09430 IPR013762 Integrase-like, catalytic core JE55_RS09430 IPR023009 Tyrosine recombinase XerC/XerD JE55_RS09430 IPR023109 Integrase/recombinase, N-terminal JE55_RS09435 IPR007435 Protein of unknown function DUF484 JE55_RS09440 IPR001653 Diaminopimelate epimerase, DapF JE55_RS09440 IPR018510 Diaminopimelate epimerase, active site JE55_RS09445 IPR004960 Bacterial lipid A biosynthesis acyltransferase JE55_RS09450 IPR002133 S-adenosylmethionine synthetase JE55_RS09450 IPR022628 S-adenosylmethionine synthetase, N-terminal JE55_RS09450 IPR022629 S-adenosylmethionine synthetase, central domain JE55_RS09450 IPR022630 S-adenosylmethionine synthetase, C-terminal JE55_RS09450 IPR022631 S-adenosylmethionine synthetase, conserved site JE55_RS09450 IPR022636 S-adenosylmethionine synthetase superfamily JE55_RS09465 IPR008775 Phytanoyl-CoA dioxygenase JE55_RS09470 IPR021521 Protein of unknown function DUF3185 JE55_RS09475 IPR001395 Aldo/keto reductase JE55_RS09475 IPR023210 NADP-dependent oxidoreductase domain JE55_RS09485 IPR000620 Drug/metabolite transporter JE55_RS09500 IPR002575 Aminoglycoside phosphotransferase JE55_RS09500 IPR011009 Protein kinase-like domain JE55_RS09500 IPR032882 JE55_RS09500 JE55_RS09510 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent JE55_RS09510 IPR015590 Aldehyde dehydrogenase domain JE55_RS09510 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS09510 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS09510 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS09510 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JE55_RS09515 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS09515 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS09515 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS09520 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal JE55_RS09520 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal JE55_RS09520 IPR012132 Glucose-methanol-choline oxidoreductase JE55_RS09520 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS09525 IPR021136 Flagellar hook-length control protein-like, C-terminal JE55_RS09530 IPR012823 Flagellar export FliJ JE55_RS09530 IPR018006 Flagellar FliJ, proteobacteria JE55_RS09535 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JE55_RS09535 IPR003593 AAA+ ATPase domain JE55_RS09535 IPR005714 ATPase, type III secretion system, FliI/YscN JE55_RS09535 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JE55_RS09535 IPR020005 Flagellar export ATPase FliI, clade 1 JE55_RS09535 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09535 IPR032463 JE55_RS09535 JE55_RS09540 IPR000563 Flagellar assembly protein FliH JE55_RS09540 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE JE55_RS09545 IPR000090 Flagellar motor switch protein FliG JE55_RS09545 IPR011002 Flagellar motor switch protein FliG, alpha-helical JE55_RS09545 IPR023087 JE55_RS09545 JE55_RS09545 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JE55_RS09545 IPR032779 JE55_RS09545 JE55_RS09550 IPR000067 Flagellar M-ring protein FliF JE55_RS09550 IPR006182 Secretory protein YscJ/FliF JE55_RS09550 IPR013556 Flagellar M-ring C-terminal JE55_RS09555 IPR001624 Flagellar hook-basal body complex protein FliE JE55_RS09560 IPR003713 Flagellar protein FliS JE55_RS09565 IPR008622 Flagellar protein FliT JE55_RS09570 IPR021136 Flagellar hook-length control protein-like, C-terminal JE55_RS09575 IPR006135 Type III secretion system substrate exporter JE55_RS09575 IPR029025 Type III secretion system substrate exporter, C-terminal JE55_RS09580 IPR032307 JE55_RS09580 JE55_RS09585 IPR003777 XdhC- CoxI JE55_RS09585 IPR016185 Pre-ATP-grasp domain JE55_RS09585 IPR027051 XdhC Rossmann domain JE55_RS09590 IPR002293 Amino acid/polyamine transporter I JE55_RS09595 IPR000792 Transcription regulator LuxR, C-terminal JE55_RS09595 IPR001789 Signal transduction response regulator, receiver domain JE55_RS09595 IPR011006 CheY-like superfamily JE55_RS09595 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09595 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS09600 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09600 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain JE55_RS09605 IPR001433 Oxidoreductase FAD/NAD(P)-binding JE55_RS09605 IPR008333 Oxidoreductase, FAD-binding domain JE55_RS09605 IPR017938 Riboflavin synthase-like beta-barrel JE55_RS09610 IPR001123 Lysine-type exporter protein (LYSE/YGGA) JE55_RS09615 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS09630 IPR003593 AAA+ ATPase domain JE55_RS09630 IPR003959 ATPase, AAA-type, core JE55_RS09630 IPR027065 Lon protease JE55_RS09630 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09635 IPR006076 FAD dependent oxidoreductase JE55_RS09635 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS09640 IPR000170 High potential iron-sulphur protein JE55_RS09645 IPR005828 General substrate transporter JE55_RS09645 IPR005829 Sugar transporter, conserved site JE55_RS09645 IPR011701 Major facilitator superfamily JE55_RS09645 IPR020846 Major facilitator superfamily domain JE55_RS09650 IPR000914 Bacterial extracellular solute-binding protein, family 5 JE55_RS09650 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site JE55_RS09650 IPR030678 JE55_RS09650 JE55_RS09655 IPR000515 MetI-like domain JE55_RS09660 IPR000515 MetI-like domain JE55_RS09660 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JE55_RS09665 IPR003439 ABC transporter-like JE55_RS09665 IPR003593 AAA+ ATPase domain JE55_RS09665 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JE55_RS09665 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09670 IPR003439 ABC transporter-like JE55_RS09670 IPR003593 AAA+ ATPase domain JE55_RS09670 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JE55_RS09670 IPR017871 ABC transporter, conserved site JE55_RS09670 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09675 IPR002816 Pheromone shutdown, TraB JE55_RS09680 IPR009323 Protein of unknown function DUF979 JE55_RS09685 IPR010374 Protein of unknown function DUF969 JE55_RS09695 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF JE55_RS09695 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JE55_RS09700 IPR003778 Allophanate hydrolase subunit 2 JE55_RS09700 IPR029000 Cyclophilin-like domain JE55_RS09705 IPR003833 Allophanate hydrolase subunit 1 JE55_RS09705 IPR010016 Sensor histidine kinase inhibitor, KipI family JE55_RS09705 IPR024946 Arginine repressor C-terminal-like domain JE55_RS09705 IPR029000 Cyclophilin-like domain JE55_RS09710 IPR000835 MarR-type HTH domain JE55_RS09710 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09710 IPR014601 Transcriptional regulator with MarR-type HTH domain JE55_RS09715 IPR002698 5-formyltetrahydrofolate cyclo-ligase JE55_RS09715 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain JE55_RS09720 IPR008258 Lytic transglycosylase-like SLT domain JE55_RS09720 IPR008939 Lytic transglycosylase, superhelical U-shaped JE55_RS09720 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain JE55_RS09720 IPR023346 Lysozyme-like domain JE55_RS09725 IPR016040 NAD(P)-binding domain JE55_RS09730 IPR004045 Glutathione S-transferase, N-terminal JE55_RS09730 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS09730 IPR012336 Thioredoxin-like fold JE55_RS09735 IPR002646 Poly A polymerase, head domain JE55_RS09735 IPR006674 HD domain JE55_RS09735 IPR012006 tRNA nucleotidyltransferase, proteobacteria JE55_RS09735 IPR032828 JE55_RS09735 JE55_RS09745 IPR007809 FlgN-like domain JE55_RS09750 IPR007412 Anti-sigma-28 factor, FlgM JE55_RS09750 IPR031316 JE55_RS09750 JE55_RS09755 IPR013974 SAF domain JE55_RS09755 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal JE55_RS09760 IPR001444 Flagellar basal body rod protein, N-terminal JE55_RS09760 IPR006300 Flagellar basal-body rod protein FlgB JE55_RS09760 IPR019776 Flagellar basal body rod protein, conserved site JE55_RS09765 IPR001444 Flagellar basal body rod protein, N-terminal JE55_RS09765 IPR006299 Flagellar basal-body rod protein FlgC JE55_RS09765 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JE55_RS09765 IPR019776 Flagellar basal body rod protein, conserved site JE55_RS09770 IPR005648 Flagellar hook capping protein JE55_RS09770 IPR025963 FlgD Tudor-like domain JE55_RS09770 IPR025965 FlgD Ig-like domain JE55_RS09775 IPR001444 Flagellar basal body rod protein, N-terminal JE55_RS09775 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JE55_RS09775 IPR011491 Flagellar basal body FlaE JE55_RS09775 IPR019776 Flagellar basal body rod protein, conserved site JE55_RS09775 IPR020013 Fagellar hook-basal body protein, FlgE/F/G JE55_RS09780 IPR001444 Flagellar basal body rod protein, N-terminal JE55_RS09780 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JE55_RS09780 IPR012836 Flagellar basal-body rod FlgF JE55_RS09780 IPR019776 Flagellar basal body rod protein, conserved site JE55_RS09780 IPR020013 Fagellar hook-basal body protein, FlgE/F/G JE55_RS09785 IPR001444 Flagellar basal body rod protein, N-terminal JE55_RS09785 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JE55_RS09785 IPR012834 Flagellar basal-body rod FlgG JE55_RS09785 IPR012836 Flagellar basal-body rod FlgF JE55_RS09785 IPR019776 Flagellar basal body rod protein, conserved site JE55_RS09785 IPR020013 Fagellar hook-basal body protein, FlgE/F/G JE55_RS09790 IPR000527 Flagellar L-ring protein JE55_RS09795 IPR001782 Flagellar P-ring protein JE55_RS09800 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain JE55_RS09800 IPR013377 Flagellar rod assembly protein/muramidase FlgJ JE55_RS09800 IPR019301 Flagellar protein FlgJ, N-terminal JE55_RS09805 IPR009875 PilZ domain JE55_RS09805 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal JE55_RS09805 IPR012349 FMN-binding split barrel JE55_RS09805 IPR023787 Type III secretion system flagellar brake protein YcgR JE55_RS09810 IPR002371 Flagellar hook-associated protein, FlgK JE55_RS09810 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JE55_RS09815 IPR001029 Flagellin, D0/D1 domain JE55_RS09815 IPR013384 Flagellar hook-associated protein 3 JE55_RS09820 IPR006042 Xanthine/uracil permease JE55_RS09820 IPR006043 Xanthine/uracil/vitamin C permease JE55_RS09825 IPR000847 Transcription regulator HTH, LysR JE55_RS09825 IPR005119 LysR, substrate-binding JE55_RS09825 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09830 IPR003370 Chromate transporter JE55_RS09835 IPR003370 Chromate transporter JE55_RS09835 IPR018181 Heat shock protein 70, conserved site JE55_RS09845 IPR004624 PhnA protein JE55_RS09845 IPR013987 PhnA protein, N-terminal JE55_RS09845 IPR013988 PhnA protein, C-terminal JE55_RS09850 IPR010699 Protein of unknown function DUF1275 JE55_RS09855 IPR002299 Porin, Neisseria sp. type JE55_RS09855 IPR023614 Porin domain JE55_RS09860 IPR029058 Alpha/Beta hydrolase fold JE55_RS09870 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD JE55_RS09875 IPR017835 Hopanoid biosynthesis associated glycosyltransferase, HpnI JE55_RS09875 IPR025993 Ceramide glucosyltransferase JE55_RS09875 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS09880 IPR007049 Carbohydrate-selective porin OprB JE55_RS09900 IPR001046 NRAMP family JE55_RS09910 IPR008490 Transposase InsH, N-terminal JE55_RS09910 IPR025668 Transposase DDE domain JE55_RS09915 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JE55_RS09915 IPR006324 Glutathione-disulphide reductase JE55_RS09915 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site JE55_RS09915 IPR016156 FAD/NAD-linked reductase, dimerisation domain JE55_RS09915 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS09920 IPR001518 Argininosuccinate synthase JE55_RS09920 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS09920 IPR018223 Argininosuccinate synthase, conserved site JE55_RS09920 IPR023437 Argininosuccinate synthase, type 2 subfamily JE55_RS09920 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail JE55_RS09920 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body JE55_RS09935 IPR006121 Heavy metal-associated domain, HMA JE55_RS09935 IPR017969 Heavy-metal-associated, conserved site JE55_RS09945 IPR001757 Cation-transporting P-type ATPase JE55_RS09945 IPR007029 YHS domain JE55_RS09945 IPR008250 P-type ATPase, A domain JE55_RS09945 IPR009078 Ferritin-like superfamily JE55_RS09945 IPR011017 TRASH domain JE55_RS09945 IPR018303 P-type ATPase, phosphorylation site JE55_RS09945 IPR023214 HAD-like domain JE55_RS09945 IPR023299 P-type ATPase, cytoplasmic domain N JE55_RS09945 IPR027256 Cation-transporting P-type ATPase, subfamily IB JE55_RS09950 IPR007156 LemA JE55_RS09950 IPR023353 LemA-like domain JE55_RS09955 IPR007621 TPM domain JE55_RS09960 IPR007621 TPM domain JE55_RS09970 IPR003423 Outer membrane efflux protein JE55_RS09975 IPR006143 RND efflux pump, membrane fusion protein JE55_RS09975 IPR021647 Copper binding periplasmic protein CusF JE55_RS09975 IPR032317 JE55_RS09975 JE55_RS09980 IPR001036 Acriflavin resistance protein JE55_RS09980 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA JE55_RS09980 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS09985 IPR021647 Copper binding periplasmic protein CusF JE55_RS09995 IPR005468 Avidin/streptavidin JE55_RS10000 IPR001347 Sugar isomerase (SIS) JE55_RS10000 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising JE55_RS10000 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS10005 IPR001451 Bacterial transferase hexapeptide repeat JE55_RS10005 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase JE55_RS10005 IPR011004 Trimeric LpxA-like JE55_RS10005 IPR025877 MobA-like NTP transferase domain JE55_RS10005 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS10010 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase JE55_RS10010 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA JE55_RS10010 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS10015 IPR006157 Dihydroneopterin aldolase/epimerase domain JE55_RS10020 IPR016040 NAD(P)-binding domain JE55_RS10025 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA JE55_RS10025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS10030 IPR021320 Protein of unknown function DUF2905 JE55_RS10040 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JE55_RS10040 IPR011611 Carbohydrate kinase PfkB JE55_RS10040 IPR029056 Ribokinase-like JE55_RS10045 IPR008928 Six-hairpin glycosidase-like JE55_RS10045 IPR012341 Six-hairpin glycosidase JE55_RS10050 IPR000843 Transcription regulator HTH, LacI JE55_RS10050 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS10050 IPR028082 Periplasmic binding protein-like I JE55_RS10055 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding JE55_RS10055 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JE55_RS10055 IPR004090 Chemotaxis methyl-accepting receptor JE55_RS10065 IPR016833 Putative sodium bile acid cotransporter JE55_RS10075 IPR023614 Porin domain JE55_RS10080 IPR000847 Transcription regulator HTH, LysR JE55_RS10080 IPR005119 LysR, substrate-binding JE55_RS10080 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10085 IPR004136 2-nitropropane dioxygenase, NPD JE55_RS10085 IPR013785 Aldolase-type TIM barrel JE55_RS10090 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS10090 IPR000639 Epoxide hydrolase-like JE55_RS10090 IPR029058 Alpha/Beta hydrolase fold JE55_RS10095 IPR000485 AsnC-type HTH domain JE55_RS10095 IPR011008 Dimeric alpha-beta barrel JE55_RS10095 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10095 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JE55_RS10095 IPR019887 Transcription regulator AsnC-type, C-terminal JE55_RS10095 IPR019888 Transcription regulator AsnC-type JE55_RS10100 IPR000620 Drug/metabolite transporter JE55_RS10105 IPR010710 Protein of unknown function DUF1289 JE55_RS10110 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JE55_RS10115 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site JE55_RS10115 IPR000891 Pyruvate carboxyltransferase JE55_RS10115 IPR013785 Aldolase-type TIM barrel JE55_RS10120 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JE55_RS10120 IPR016040 NAD(P)-binding domain JE55_RS10120 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JE55_RS10120 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JE55_RS10125 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JE55_RS10125 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS10130 IPR010662 Putative hydrolase RBBP9/YdeN JE55_RS10130 IPR029058 Alpha/Beta hydrolase fold JE55_RS10135 IPR000086 NUDIX hydrolase domain JE55_RS10135 IPR015797 NUDIX hydrolase domain-like JE55_RS10135 IPR020084 NUDIX hydrolase, conserved site JE55_RS10135 IPR020476 NUDIX hydrolase JE55_RS10140 IPR007312 Phosphoesterase JE55_RS10140 IPR008475 Bacterial phospholipase C, C-terminal domain JE55_RS10140 IPR017767 Bacterial phospholipase C, phosphocholine-specific JE55_RS10140 IPR017850 Alkaline-phosphatase-like, core domain JE55_RS10150 IPR000485 AsnC-type HTH domain JE55_RS10150 IPR011008 Dimeric alpha-beta barrel JE55_RS10150 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10150 IPR019887 Transcription regulator AsnC-type, C-terminal JE55_RS10150 IPR019888 Transcription regulator AsnC-type JE55_RS10155 IPR011606 Branched-chain amino acid transport, permease JE55_RS10160 IPR008407 Branched-chain amino acid transport, AzlD JE55_RS10165 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS10165 IPR029058 Alpha/Beta hydrolase fold JE55_RS10175 IPR003782 Copper chaperone SCO1/SenC JE55_RS10175 IPR012336 Thioredoxin-like fold JE55_RS10180 IPR006652 Kelch repeat type 1 JE55_RS10180 IPR009880 Glyoxal oxidase, N-terminal JE55_RS10180 IPR011043 Galactose oxidase/kelch, beta-propeller JE55_RS10180 IPR013783 Immunoglobulin-like fold JE55_RS10180 IPR014756 Immunoglobulin E-set JE55_RS10180 IPR015202 Domain of unknown function DUF1929 JE55_RS10180 IPR015916 Galactose oxidase, beta-propeller JE55_RS10190 IPR002220 DapA-like JE55_RS10190 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA JE55_RS10190 IPR013785 Aldolase-type TIM barrel JE55_RS10190 IPR020625 Dihydrodipicolinate synthetase, active site JE55_RS10200 IPR025161 Putative transposase IS4/IS5 family JE55_RS10205 IPR021087 Uncharacterised protein family PixA/AidA JE55_RS10210 IPR021087 Uncharacterised protein family PixA/AidA JE55_RS10220 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10225 IPR005669 Thiosulphate/Sulfate-binding protein JE55_RS10230 IPR001563 Peptidase S10, serine carboxypeptidase JE55_RS10230 IPR029058 Alpha/Beta hydrolase fold JE55_RS10240 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic JE55_RS10240 IPR014756 Immunoglobulin E-set JE55_RS10240 IPR016449 Potassium channel, inwardly rectifying, Kir JE55_RS10245 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain JE55_RS10245 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JE55_RS10245 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain JE55_RS10245 IPR029061 Thiamin diphosphate-binding fold JE55_RS10250 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria JE55_RS10250 IPR006153 Cation/H+ exchanger JE55_RS10250 IPR018422 Cation/H+ exchanger, CPA1 family JE55_RS10255 IPR001633 EAL domain JE55_RS10255 IPR029151 Periplasmic sensor domain-like JE55_RS10265 IPR001952 Alkaline phosphatase JE55_RS10265 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha JE55_RS10265 IPR017850 Alkaline-phosphatase-like, core domain JE55_RS10270 IPR001952 Alkaline phosphatase JE55_RS10270 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha JE55_RS10270 IPR017850 Alkaline-phosphatase-like, core domain JE55_RS10285 IPR005627 Copper homeostasis protein CutC JE55_RS10285 IPR023648 Copper homeostasis CutC domain JE55_RS10290 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB JE55_RS10290 IPR006638 Elongator protein 3/MiaB/NifB JE55_RS10290 IPR007197 Radical SAM JE55_RS10290 IPR010722 Biotin and thiamin synthesis-associated domain JE55_RS10290 IPR013785 Aldolase-type TIM barrel JE55_RS10290 IPR024177 Biotin synthase JE55_RS10295 IPR004472 Dethiobiotin synthase BioD JE55_RS10295 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10300 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type JE55_RS10300 IPR004839 Aminotransferase, class I/classII JE55_RS10300 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS10300 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS10300 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS10300 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria JE55_RS10305 IPR005814 Aminotransferase class-III JE55_RS10305 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA JE55_RS10305 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS10305 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS10305 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS10310 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain JE55_RS10310 IPR029058 Alpha/Beta hydrolase fold JE55_RS10315 IPR032710 JE55_RS10315 JE55_RS10320 IPR002347 Glucose/ribitol dehydrogenase JE55_RS10320 IPR016040 NAD(P)-binding domain JE55_RS10325 IPR002155 Thiolase JE55_RS10325 IPR016039 Thiolase-like JE55_RS10325 IPR020610 Thiolase, active site JE55_RS10325 IPR020616 Thiolase, N-terminal JE55_RS10325 IPR020617 Thiolase, C-terminal JE55_RS10330 IPR001765 Carbonic anhydrase JE55_RS10330 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site JE55_RS10335 IPR010452 Isocitrate dehydrogenase kinasephosphatase JE55_RS10340 IPR001279 Beta-lactamase-like JE55_RS10345 IPR003439 ABC transporter-like JE55_RS10345 IPR003593 AAA+ ATPase domain JE55_RS10345 IPR017871 ABC transporter, conserved site JE55_RS10345 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10350 IPR000914 Bacterial extracellular solute-binding protein, family 5 JE55_RS10350 IPR030678 JE55_RS10350 JE55_RS10355 IPR000835 MarR-type HTH domain JE55_RS10355 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10360 IPR002347 Glucose/ribitol dehydrogenase JE55_RS10360 IPR016040 NAD(P)-binding domain JE55_RS10365 IPR002347 Glucose/ribitol dehydrogenase JE55_RS10365 IPR016040 NAD(P)-binding domain JE55_RS10370 IPR001853 DSBA-like thioredoxin domain JE55_RS10370 IPR012336 Thioredoxin-like fold JE55_RS10370 IPR017937 Thioredoxin, conserved site JE55_RS10370 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL JE55_RS10375 IPR007730 Sporulation-related domain JE55_RS10380 IPR001278 Arginine-tRNA ligase JE55_RS10380 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JE55_RS10380 IPR005148 Arginyl tRNA synthetase N-terminal domain JE55_RS10380 IPR008909 DALR anticodon binding JE55_RS10380 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JE55_RS10380 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS10385 IPR014991 Protein of unknown function DUF1840 JE55_RS10390 IPR000489 Pterin-binding JE55_RS10390 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain JE55_RS10390 IPR004223 Vitamin B12-dependent methionine synthase, activation domain JE55_RS10390 IPR006158 Cobalamin (vitamin B12)-binding domain JE55_RS10390 IPR011005 Dihydropteroate synthase-like JE55_RS10390 IPR011822 Cobalamin-dependent methionine synthase JE55_RS10395 IPR003726 Homocysteine S-methyltransferase JE55_RS10400 IPR021951 Protein of unknown function DUF3567 JE55_RS10410 IPR005471 Transcription regulator IclR, N-terminal JE55_RS10410 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10410 IPR014757 Transcription regulator IclR, C-terminal JE55_RS10410 IPR029016 GAF domain-like JE55_RS10415 IPR011234 Fumarylacetoacetase, C-terminal-related JE55_RS10420 IPR001753 Crotonase superfamily JE55_RS10420 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site JE55_RS10420 IPR029045 ClpP/crotonase-like domain JE55_RS10430 IPR002641 Patatin/Phospholipase A2-related JE55_RS10430 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JE55_RS10435 IPR009078 Ferritin-like superfamily JE55_RS10435 IPR012348 Ribonucleotide reductase-related JE55_RS10440 IPR004821 Cytidyltransferase-like domain JE55_RS10440 IPR011914 RfaE bifunctional protein, domain II JE55_RS10440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS10450 IPR004619 Type III pantothenate kinase JE55_RS10455 IPR003142 Biotin protein ligase, C-terminal JE55_RS10455 IPR004143 Biotin/lipoate A/B protein ligase JE55_RS10455 IPR004408 Biotin--acetyl-CoA-carboxylase ligase JE55_RS10455 IPR008988 Transcriptional repressor, C-terminal JE55_RS10460 IPR006597 Sel1-like JE55_RS10460 IPR011990 Tetratricopeptide-like helical domain JE55_RS10465 IPR006146 5'-Nucleotidase, conserved site JE55_RS10465 IPR006179 5'-Nucleotidase/apyrase JE55_RS10465 IPR008334 5'-Nucleotidase, C-terminal JE55_RS10465 IPR029052 Metallo-dependent phosphatase-like JE55_RS10470 IPR003453 Permease domain JE55_RS10470 IPR030802 JE55_RS10470 JE55_RS10475 IPR003439 ABC transporter-like JE55_RS10475 IPR003593 AAA+ ATPase domain JE55_RS10475 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10480 IPR003399 Mammalian cell entry-related JE55_RS10485 IPR005586 Protein of unknown function DUF330 JE55_RS10490 IPR006976 VanZ-like JE55_RS10495 IPR012336 Thioredoxin-like fold JE55_RS10500 IPR022742 Putative lysophospholipase JE55_RS10500 IPR029058 Alpha/Beta hydrolase fold JE55_RS10505 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal JE55_RS10505 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS10505 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal JE55_RS10505 IPR015956 Penicillin-binding protein-associated JE55_RS10505 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A JE55_RS10510 IPR001544 Aminotransferase, class IV JE55_RS10515 IPR007454 Uncharacterised protein family UPF0250 JE55_RS10515 IPR027471 YbeD-like domain JE55_RS10520 IPR000847 Transcription regulator HTH, LysR JE55_RS10520 IPR005119 LysR, substrate-binding JE55_RS10520 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10525 IPR021317 Protein of unknown function DUF2917 JE55_RS10530 IPR000544 Octanoyltransferase JE55_RS10530 IPR004143 Biotin/lipoate A/B protein ligase JE55_RS10530 IPR020605 Octanoyltransferase, conserved site JE55_RS10535 IPR003698 Lipoyl synthase JE55_RS10535 IPR006638 Elongator protein 3/MiaB/NifB JE55_RS10535 IPR007197 Radical SAM JE55_RS10535 IPR013785 Aldolase-type TIM barrel JE55_RS10535 IPR031691 JE55_RS10535 JE55_RS10545 IPR002085 Alcohol dehydrogenase superfamily, zinc-type JE55_RS10545 IPR016040 NAD(P)-binding domain JE55_RS10550 IPR000101 Gamma-glutamyltranspeptidase JE55_RS10550 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS10560 IPR000847 Transcription regulator HTH, LysR JE55_RS10560 IPR005119 LysR, substrate-binding JE55_RS10560 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10565 IPR001753 Crotonase superfamily JE55_RS10565 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal JE55_RS10565 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding JE55_RS10565 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS10565 IPR013328 Dehydrogenase, multihelical JE55_RS10565 IPR016040 NAD(P)-binding domain JE55_RS10565 IPR029045 ClpP/crotonase-like domain JE55_RS10570 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS10570 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS10570 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS10570 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JE55_RS10575 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS10575 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS10575 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS10575 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JE55_RS10580 IPR003673 CoA-transferase family III JE55_RS10580 IPR023606 CoA-transferase family III domain JE55_RS10585 IPR007436 Protein of unknown function DUF485 JE55_RS10590 IPR001734 Sodium/solute symporter JE55_RS10595 IPR001991 Sodium:dicarboxylate symporter JE55_RS10595 IPR018107 Sodium:dicarboxylate symporter, conserved site JE55_RS10595 IPR023954 C4-dicarboxylate transport protein JE55_RS10600 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS10600 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS10600 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS10600 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) JE55_RS10600 IPR029151 Periplasmic sensor domain-like JE55_RS10600 IPR033479 JE55_RS10600 JE55_RS10605 IPR001789 Signal transduction response regulator, receiver domain JE55_RS10605 IPR002078 RNA polymerase sigma factor 54 interaction domain JE55_RS10605 IPR002197 DNA binding HTH domain, Fis-type JE55_RS10605 IPR003593 AAA+ ATPase domain JE55_RS10605 IPR009057 Homeodomain-like JE55_RS10605 IPR011006 CheY-like superfamily JE55_RS10605 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JE55_RS10605 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS10605 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS10605 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10610 IPR012336 Thioredoxin-like fold JE55_RS10610 IPR013740 Redoxin JE55_RS10620 IPR001031 Thioesterase JE55_RS10620 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS JE55_RS10620 IPR029058 Alpha/Beta hydrolase fold JE55_RS10630 IPR000182 GNAT domain JE55_RS10630 IPR016181 Acyl-CoA N-acyltransferase JE55_RS10635 IPR000523 Magnesium chelatase, ChlI subunit JE55_RS10635 IPR001208 Mini-chromosome maintenance, DNA-dependent ATPase JE55_RS10635 IPR003593 AAA+ ATPase domain JE55_RS10635 IPR004482 Mg chelatase-related protein JE55_RS10635 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS10635 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS10635 IPR025158 Mg chelatase-related protein, C-terminal domain JE55_RS10635 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10640 IPR007475 Membrane fusogenic activity JE55_RS10645 IPR002187 Nitrogen regulatory protein PII JE55_RS10645 IPR002332 Nitrogen regulatory protein P-II, urydylation site JE55_RS10645 IPR011322 Nitrogen regulatory PII-like, alpha/beta JE55_RS10645 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JE55_RS10645 IPR017918 Nitrogen regulatory protein PII, conserved site JE55_RS10650 IPR001905 Ammonium transporter JE55_RS10650 IPR018047 Ammonium transporter, conserved site JE55_RS10650 IPR024041 Ammonium transporter AmtB-like domain JE55_RS10650 IPR029020 Ammonium/urea transporter JE55_RS10655 IPR011718 Glutamate--cysteine ligase GshA JE55_RS10655 IPR013815 ATP-grasp fold, subdomain 1 JE55_RS10660 IPR004215 Prokaryotic glutathione synthetase, N-terminal JE55_RS10660 IPR004218 Prokaryotic glutathione synthetase, ATP-binding JE55_RS10660 IPR006284 Glutathione synthetase, prokaryotic JE55_RS10660 IPR013815 ATP-grasp fold, subdomain 1 JE55_RS10660 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS10660 IPR016185 Pre-ATP-grasp domain JE55_RS10665 IPR004701 Phosphotransferase system, mannose-type IIA component JE55_RS10670 IPR000032 Phosphocarrier HPr protein-like JE55_RS10670 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JE55_RS10670 IPR002114 Phosphotransferase system, HPr serine phosphorylation site JE55_RS10675 IPR000121 PEP-utilising enzyme, C-terminal JE55_RS10675 IPR006318 Phosphoenolpyruvate-utilising enzyme JE55_RS10675 IPR008279 PEP-utilising enzyme, mobile domain JE55_RS10675 IPR008731 Phosphotransferase system, enzyme I N-terminal JE55_RS10675 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JE55_RS10675 IPR018274 PEP-utilising enzyme, active site JE55_RS10675 IPR023151 PEP-utilising enzyme, conserved site JE55_RS10675 IPR024692 Phosphotransferase system, enzyme I JE55_RS10680 IPR000594 UBA/THIF-type NAD/FAD binding fold JE55_RS10680 IPR016040 NAD(P)-binding domain JE55_RS10685 IPR001478 PDZ domain JE55_RS10685 IPR004447 C-terminal-processing peptidase S41A JE55_RS10685 IPR005151 Tail specific protease JE55_RS10685 IPR029045 ClpP/crotonase-like domain JE55_RS10690 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site JE55_RS10690 IPR005952 Phosphoglycerate mutase 1 JE55_RS10690 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS10690 IPR029033 Histidine phosphatase superfamily JE55_RS10695 IPR001763 Rhodanese-like domain JE55_RS10700 IPR002109 Glutaredoxin JE55_RS10700 IPR011767 Glutaredoxin active site JE55_RS10700 IPR011900 Glutaredoxin, GrxC JE55_RS10700 IPR012336 Thioredoxin-like fold JE55_RS10700 IPR014025 Glutaredoxin subgroup JE55_RS10705 IPR003708 Bacterial protein export chaperone SecB JE55_RS10710 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal JE55_RS10710 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent JE55_RS10710 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS10710 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal JE55_RS10710 IPR013328 Dehydrogenase, multihelical JE55_RS10710 IPR016040 NAD(P)-binding domain JE55_RS10715 IPR002589 Macro domain JE55_RS10720 IPR001537 tRNA/rRNA methyltransferase, SpoU type JE55_RS10720 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase JE55_RS10720 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS10720 IPR029028 Alpha/beta knot methyltransferases JE55_RS10725 IPR029057 Phosphoribosyltransferase-like JE55_RS10730 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC JE55_RS10730 IPR013216 Methyltransferase type 11 JE55_RS10730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS10735 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane JE55_RS10735 IPR019253 Protein of unknown function DUF2244, transmembrane JE55_RS10740 IPR001505 Copper centre Cu(A) JE55_RS10740 IPR002429 Cytochrome c oxidase subunit II C-terminal JE55_RS10740 IPR006664 Outer membrane protein, bacterial JE55_RS10740 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JE55_RS10740 IPR008972 Cupredoxin JE55_RS10740 IPR009056 Cytochrome c-like domain JE55_RS10740 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain JE55_RS10740 IPR014222 Cytochrome c oxidase, subunit II JE55_RS10745 IPR000883 Cytochrome c oxidase subunit I JE55_RS10745 IPR014241 Cytochrome c oxidase, subunit I bacterial type JE55_RS10745 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site JE55_RS10745 IPR023616 Cytochrome c oxidase, subunit I domain JE55_RS10755 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 JE55_RS10755 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain JE55_RS10760 IPR021344 Protein of unknown function DUF2970 JE55_RS10765 IPR000298 Cytochrome c oxidase subunit III domain JE55_RS10765 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle JE55_RS10765 IPR024791 Cytochrome c oxidase subunit III JE55_RS10770 IPR021313 Protein of unknown function DUF2909 JE55_RS10775 IPR002994 Surfeit locus 1/Shy1 JE55_RS10780 IPR012336 Thioredoxin-like fold JE55_RS10785 IPR003780 COX15/CtaA family JE55_RS10790 IPR000537 UbiA prenyltransferase family JE55_RS10790 IPR006369 Protohaem IX farnesyltransferase JE55_RS10790 IPR030470 JE55_RS10790 JE55_RS10795 IPR003782 Copper chaperone SCO1/SenC JE55_RS10795 IPR012336 Thioredoxin-like fold JE55_RS10800 IPR005545 YCII-related JE55_RS10800 IPR011008 Dimeric alpha-beta barrel JE55_RS10805 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JE55_RS10805 IPR004090 Chemotaxis methyl-accepting receptor JE55_RS10805 IPR033480 JE55_RS10805 JE55_RS10810 IPR004872 Lipoprotein NlpA family JE55_RS10820 IPR007487 ABC transporter, substrate-binding protein JE55_RS10820 IPR028082 Periplasmic binding protein-like I JE55_RS10825 IPR001851 ABC transporter, permease JE55_RS10830 IPR003439 ABC transporter-like JE55_RS10830 IPR003593 AAA+ ATPase domain JE55_RS10830 IPR017871 ABC transporter, conserved site JE55_RS10830 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10835 IPR017166 Uncharacterised conserved protein UCP037290 JE55_RS10835 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10840 IPR001126 DNA-repair protein, UmuC-like JE55_RS10845 IPR003141 Polymerase/histidinol phosphatase, N-terminal JE55_RS10845 IPR004013 PHP, C-terminal JE55_RS10845 IPR004805 DNA polymerase III, alpha subunit JE55_RS10845 IPR011708 Bacterial DNA polymerase III, alpha subunit JE55_RS10845 IPR016195 Polymerase/histidinol phosphatase-like JE55_RS10845 IPR023073 DNA polymerase, error-prone JE55_RS10845 IPR029460 DNA polymerase, helix-hairpin-helix motif JE55_RS10855 IPR011701 Major facilitator superfamily JE55_RS10855 IPR020846 Major facilitator superfamily domain JE55_RS10860 IPR005804 Fatty acid desaturase, type 1 JE55_RS10865 IPR004637 2,4-diaminobutyrate 4-transaminase JE55_RS10865 IPR005814 Aminotransferase class-III JE55_RS10865 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS10865 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS10865 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS10880 IPR003439 ABC transporter-like JE55_RS10880 IPR003593 AAA+ ATPase domain JE55_RS10880 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10885 IPR003819 Taurine catabolism dioxygenase TauD/TfdA JE55_RS10890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS10895 IPR002020 Citrate synthase-like JE55_RS10895 IPR016142 Citrate synthase-like, large alpha subdomain JE55_RS10895 IPR016143 Citrate synthase-like, small alpha subdomain JE55_RS10900 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS10900 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS10900 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS10900 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria JE55_RS10900 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain JE55_RS10905 IPR016039 Thiolase-like JE55_RS10910 IPR000873 AMP-dependent synthetase/ligase JE55_RS10910 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated JE55_RS10910 IPR020845 AMP-binding, conserved site JE55_RS10910 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS10915 IPR000183 Ornithine/DAP/Arg decarboxylase JE55_RS10915 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JE55_RS10915 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal JE55_RS10915 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal JE55_RS10915 IPR029066 PLP-binding barrel JE55_RS10920 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JE55_RS10920 IPR016039 Thiolase-like JE55_RS10925 IPR009078 Ferritin-like superfamily JE55_RS10925 IPR012348 Ribonucleotide reductase-related JE55_RS10925 IPR025859 P-aminobenzoate N-oxygenase AurF JE55_RS10940 IPR009081 Acyl carrier protein-like JE55_RS10950 IPR000873 AMP-dependent synthetase/ligase JE55_RS10950 IPR020845 AMP-binding, conserved site JE55_RS10950 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS10955 IPR000847 Transcription regulator HTH, LysR JE55_RS10955 IPR005119 LysR, substrate-binding JE55_RS10955 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10960 IPR000524 Transcription regulator HTH, GntR JE55_RS10960 IPR011663 UbiC transcription regulator-associated JE55_RS10960 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10960 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS10965 IPR003764 N-acetylglucosamine-6-phosphate deacetylase JE55_RS10965 IPR006680 Amidohydrolase 1 JE55_RS10965 IPR011059 Metal-dependent hydrolase, composite domain JE55_RS10965 IPR032466 JE55_RS10965 JE55_RS10970 IPR001347 Sugar isomerase (SIS) JE55_RS10975 IPR000032 Phosphocarrier HPr protein-like JE55_RS10975 IPR000121 PEP-utilising enzyme, C-terminal JE55_RS10975 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JE55_RS10975 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JE55_RS10975 IPR006318 Phosphoenolpyruvate-utilising enzyme JE55_RS10975 IPR008279 PEP-utilising enzyme, mobile domain JE55_RS10975 IPR008731 Phosphotransferase system, enzyme I N-terminal JE55_RS10975 IPR011055 Duplicated hybrid motif JE55_RS10975 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JE55_RS10975 IPR018274 PEP-utilising enzyme, active site JE55_RS10975 IPR023151 PEP-utilising enzyme, conserved site JE55_RS10980 IPR001996 Phosphotransferase system, IIB component, type 1 JE55_RS10980 IPR003352 Phosphotransferase system, EIIC JE55_RS10980 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component JE55_RS10980 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JE55_RS10985 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain JE55_RS10985 IPR008965 Carbohydrate-binding domain JE55_RS10985 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain JE55_RS10985 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS10985 IPR014756 Immunoglobulin E-set JE55_RS10985 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal JE55_RS10985 IPR015883 Glycoside hydrolase family 20, catalytic core JE55_RS10985 IPR017853 Glycoside hydrolase, superfamily JE55_RS10985 IPR018247 EF-Hand 1, calcium-binding site JE55_RS10985 IPR025705 Beta-hexosaminidase JE55_RS10985 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like JE55_RS10995 IPR011724 Cyd operon protein YbgT JE55_RS10995 IPR012994 Membrane bound YbgT-like JE55_RS11000 IPR003317 Cytochrome d ubiquinol oxidase, subunit II JE55_RS11005 IPR002585 Cytochrome d ubiquinol oxidase, subunit I JE55_RS11015 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 JE55_RS11015 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger JE55_RS11015 IPR032877 JE55_RS11015 JE55_RS11020 IPR000943 RNA polymerase sigma-70 JE55_RS11020 IPR007627 RNA polymerase sigma-70 region 2 JE55_RS11020 IPR007630 RNA polymerase sigma-70 region 4 JE55_RS11020 IPR009042 RNA polymerase sigma-70 region 1.2 JE55_RS11020 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11020 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria JE55_RS11020 IPR013324 RNA polymerase sigma factor, region 3/4 JE55_RS11020 IPR013325 RNA polymerase sigma factor, region 2 JE55_RS11020 IPR014284 RNA polymerase sigma-70 like domain JE55_RS11025 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel JE55_RS11025 IPR018550 Lipid A 3-O-deacylase-related JE55_RS11030 IPR027843 Domain of unknown function DUF4440 JE55_RS11030 IPR032710 JE55_RS11030 JE55_RS11035 IPR000891 Pyruvate carboxyltransferase JE55_RS11035 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site JE55_RS11035 IPR005668 2-isopropylmalate synthase JE55_RS11035 IPR013785 Aldolase-type TIM barrel JE55_RS11040 IPR000182 GNAT domain JE55_RS11040 IPR016181 Acyl-CoA N-acyltransferase JE55_RS11045 IPR000312 Glycosyl transferase, family 3 JE55_RS11045 IPR017459 Glycosyl transferase family 3, N-terminal domain JE55_RS11050 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site JE55_RS11050 IPR006656 Molybdopterin oxidoreductase JE55_RS11050 IPR006657 Molydopterin dinucleotide-binding domain JE55_RS11050 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain JE55_RS11050 IPR007419 BFD-like [2Fe-2S]-binding domain JE55_RS11050 IPR009010 Aspartate decarboxylase-like domain JE55_RS11050 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site JE55_RS11055 IPR017941 Rieske [2Fe-2S] iron-sulphur domain JE55_RS11060 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain JE55_RS11060 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site JE55_RS11060 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain JE55_RS11060 IPR007419 BFD-like [2Fe-2S]-binding domain JE55_RS11060 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB JE55_RS11060 IPR017121 Nitrite reductase [NAD(P)H], large subunit JE55_RS11060 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS11070 IPR004045 Glutathione S-transferase, N-terminal JE55_RS11070 IPR005955 Maleylacetoacetate isomerase JE55_RS11070 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS11070 IPR012336 Thioredoxin-like fold JE55_RS11075 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JE55_RS11075 IPR003593 AAA+ ATPase domain JE55_RS11075 IPR004390 Signal-recognition particle receptor FtsY JE55_RS11075 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle JE55_RS11075 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11080 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JE55_RS11080 IPR004398 RNA methyltransferase, RsmD JE55_RS11080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS11085 IPR001980 Coenzyme A biosynthesis protein JE55_RS11085 IPR004821 Cytidyltransferase-like domain JE55_RS11085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS11090 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS11090 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS11095 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site JE55_RS11095 IPR004839 Aminotransferase, class I/classII JE55_RS11095 IPR005861 Histidinol-phosphate aminotransferase family JE55_RS11095 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS11095 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS11095 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS11100 IPR001328 Peptidyl-tRNA hydrolase JE55_RS11100 IPR018171 Peptidyl-tRNA hydrolase, conserved site JE55_RS11105 IPR001021 Ribosomal protein L25, long-form JE55_RS11105 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain JE55_RS11105 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain JE55_RS11105 IPR020057 Ribosomal protein L25, beta domain JE55_RS11105 IPR029751 Ribosomal protein L25 JE55_RS11110 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site JE55_RS11110 IPR005946 Ribose-phosphate diphosphokinase JE55_RS11110 IPR029057 Phosphoribosyltransferase-like JE55_RS11110 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain JE55_RS11120 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase JE55_RS11120 IPR006204 GHMP kinase N-terminal domain JE55_RS11120 IPR013750 GHMP kinase, C-terminal domain JE55_RS11120 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS11120 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS11125 IPR004565 Outer membrane lipoprotein LolB JE55_RS11125 IPR029046 Lipoprotein localisation LolA/LolB/LppX JE55_RS11130 IPR011990 Tetratricopeptide-like helical domain JE55_RS11130 IPR019734 Tetratricopeptide repeat JE55_RS11135 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase JE55_RS11135 IPR010979 Ribosomal protein S13-like, H2TH JE55_RS11135 IPR012319 DNA glycosylase/AP lyase, catalytic domain JE55_RS11135 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding JE55_RS11135 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site JE55_RS11135 IPR020629 Formamidopyrimidine-DNA glycosylase JE55_RS11140 IPR000445 Helix-hairpin-helix motif JE55_RS11140 IPR003265 HhH-GPD domain JE55_RS11140 IPR004036 Endonuclease III-like, conserved site-2 JE55_RS11140 IPR005760 A/G-specific adenine glycosylase MutY JE55_RS11140 IPR011257 DNA glycosylase JE55_RS11140 IPR015797 NUDIX hydrolase domain-like JE55_RS11140 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JE55_RS11140 IPR029119 MutY, C-terminal JE55_RS11145 IPR003111 Peptidase S16, lon N-terminal JE55_RS11145 IPR015947 PUA-like domain JE55_RS11150 IPR005337 ATPase, P-loop-containing JE55_RS11150 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11155 IPR003755 HPr(Ser) kinase/phosphorylase JE55_RS11155 IPR011104 HPr kinase/phosphorylase, C-terminal JE55_RS11155 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal JE55_RS11155 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11155 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like JE55_RS11160 IPR002178 PTS EIIA type-2 domain JE55_RS11160 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN JE55_RS11160 IPR016152 Phosphotransferase/anion transporter JE55_RS11165 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein JE55_RS11170 IPR000394 RNA polymerase sigma factor 54 JE55_RS11170 IPR007046 RNA polymerase sigma factor 54, core-binding JE55_RS11170 IPR007634 RNA polymerase sigma factor 54, DNA-binding JE55_RS11175 IPR003439 ABC transporter-like JE55_RS11175 IPR003593 AAA+ ATPase domain JE55_RS11175 IPR017871 ABC transporter, conserved site JE55_RS11175 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11175 IPR030921 JE55_RS11175 JE55_RS11175 IPR032823 JE55_RS11175 JE55_RS11180 IPR005653 Organic solvent tolerance-like, N-terminal JE55_RS11180 IPR014340 Lipopolysaccharide assembly, LptA JE55_RS11185 IPR010664 Lipopolysaccharide assembly, LptC-related JE55_RS11185 IPR026265 Lipopolysaccharide export system protein LptC JE55_RS11190 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase JE55_RS11190 IPR023214 HAD-like domain JE55_RS11195 IPR000644 CBS domain JE55_RS11195 IPR001347 Sugar isomerase (SIS) JE55_RS11195 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type JE55_RS11200 IPR003148 Regulator of K+ conductance, N-terminal JE55_RS11200 IPR006037 Regulator of K+ conductance, C-terminal JE55_RS11200 IPR006153 Cation/H+ exchanger JE55_RS11200 IPR016040 NAD(P)-binding domain JE55_RS11205 IPR000836 Phosphoribosyltransferase domain JE55_RS11205 IPR005764 Adenine phosphoribosyl transferase JE55_RS11205 IPR029057 Phosphoribosyltransferase-like JE55_RS11210 IPR001123 Lysine-type exporter protein (LYSE/YGGA) JE55_RS11215 IPR000086 NUDIX hydrolase domain JE55_RS11215 IPR015797 NUDIX hydrolase domain-like JE55_RS11215 IPR031804 JE55_RS11215 JE55_RS11220 IPR002376 Formyl transferase, N-terminal JE55_RS11220 IPR004810 Formyltetrahydrofolate deformylase JE55_RS11230 IPR004602 UvrABC system subunit A JE55_RS11230 IPR013815 ATP-grasp fold, subdomain 1 JE55_RS11230 IPR017871 ABC transporter, conserved site JE55_RS11230 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11235 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG JE55_RS11235 IPR011701 Major facilitator superfamily JE55_RS11235 IPR020846 Major facilitator superfamily domain JE55_RS11240 IPR000424 Primosome PriB/single-strand DNA-binding JE55_RS11240 IPR011344 Single-stranded DNA-binding protein JE55_RS11240 IPR012340 Nucleic acid-binding, OB-fold JE55_RS11245 IPR002925 Dienelactone hydrolase JE55_RS11245 IPR029058 Alpha/Beta hydrolase fold JE55_RS11250 IPR001279 Beta-lactamase-like JE55_RS11265 IPR002514 Transposase IS3/IS911family JE55_RS11265 IPR009057 Homeodomain-like JE55_RS11270 IPR001584 Integrase, catalytic core JE55_RS11270 IPR012337 Ribonuclease H-like domain JE55_RS11270 IPR025948 HTH-like domain JE55_RS11280 IPR003779 Carboxymuconolactone decarboxylase-like JE55_RS11280 IPR004675 Alkylhydroperoxidase AhpD core JE55_RS11280 IPR029032 AhpD-like JE55_RS11285 IPR003284 Salmonella virulence plasmid 65kDa B protein JE55_RS11285 IPR022045 Insecticide toxin TcdB middle/N-terminal JE55_RS11285 IPR022385 Rhs repeat-associated core JE55_RS11290 IPR011990 Tetratricopeptide-like helical domain JE55_RS11305 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS11315 IPR000092 Polyprenyl synthetase JE55_RS11315 IPR008949 Terpenoid synthase JE55_RS11315 IPR017446 Polyprenyl synthetase-related JE55_RS11345 IPR000253 Forkhead-associated (FHA) domain JE55_RS11345 IPR008984 SMAD/FHA domain JE55_RS11350 IPR000719 Protein kinase domain JE55_RS11350 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase JE55_RS11350 IPR008271 Serine/threonine-protein kinase, active site JE55_RS11350 IPR011009 Protein kinase-like domain JE55_RS11350 IPR023889 TOMM system kinase/cyclase fusion protein JE55_RS11350 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11350 IPR029787 Nucleotide cyclase JE55_RS11355 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma JE55_RS11355 IPR022261 Ribosomal natural product, two-chain TOMM family JE55_RS11360 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma JE55_RS11360 IPR022261 Ribosomal natural product, two-chain TOMM family JE55_RS11365 IPR003776 YcaO-like domain JE55_RS11365 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain JE55_RS11365 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component JE55_RS11370 IPR001303 Class II aldolase/adducin N-terminal JE55_RS11375 IPR000014 PAS domain JE55_RS11375 IPR000160 GGDEF domain JE55_RS11375 IPR001633 EAL domain JE55_RS11375 IPR029787 Nucleotide cyclase JE55_RS11380 IPR002797 Polysaccharide biosynthesis protein JE55_RS11385 IPR001296 Glycosyl transferase, family 1 JE55_RS11390 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal JE55_RS11390 IPR005835 Nucleotidyl transferase JE55_RS11390 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase JE55_RS11390 IPR011051 RmlC-like cupin domain JE55_RS11390 IPR014710 RmlC-like jelly roll fold JE55_RS11390 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS11395 IPR016181 Acyl-CoA N-acyltransferase JE55_RS11400 IPR001296 Glycosyl transferase, family 1 JE55_RS11400 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain JE55_RS11405 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JE55_RS11410 IPR002078 RNA polymerase sigma factor 54 interaction domain JE55_RS11410 IPR002197 DNA binding HTH domain, Fis-type JE55_RS11410 IPR003593 AAA+ ATPase domain JE55_RS11410 IPR009057 Homeodomain-like JE55_RS11410 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS11410 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS11410 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11415 IPR029058 Alpha/Beta hydrolase fold JE55_RS11420 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich JE55_RS11420 IPR008979 Galactose-binding domain-like JE55_RS11420 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS11420 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain JE55_RS11420 IPR017853 Glycoside hydrolase, superfamily JE55_RS11425 IPR014989 Protein of unknown function DUF1839 JE55_RS11435 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS11435 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS11435 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain JE55_RS11435 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JE55_RS11440 IPR009081 Acyl carrier protein-like JE55_RS11445 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11445 IPR012318 Helix-turn-helix motif, Crp-type JE55_RS11445 IPR014710 RmlC-like jelly roll fold JE55_RS11445 IPR018490 Cyclic nucleotide-binding-like JE55_RS11450 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11450 IPR012318 Helix-turn-helix motif, Crp-type JE55_RS11450 IPR014710 RmlC-like jelly roll fold JE55_RS11450 IPR018490 Cyclic nucleotide-binding-like JE55_RS11455 IPR003362 Bacterial sugar transferase JE55_RS11455 IPR016040 NAD(P)-binding domain JE55_RS11455 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ JE55_RS11455 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase JE55_RS11460 IPR003715 Polysaccharide export protein JE55_RS11460 IPR019554 Soluble ligand binding domain JE55_RS11465 IPR001296 Glycosyl transferase, family 1 JE55_RS11470 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel JE55_RS11480 IPR010895 CHRD JE55_RS11485 IPR002168 Lipase, GDXG, active site JE55_RS11485 IPR013094 Alpha/beta hydrolase fold-3 JE55_RS11485 IPR029058 Alpha/Beta hydrolase fold JE55_RS11490 IPR024787 EcsC protein JE55_RS11495 IPR011701 Major facilitator superfamily JE55_RS11495 IPR020846 Major facilitator superfamily domain JE55_RS11500 IPR000835 MarR-type HTH domain JE55_RS11500 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11505 IPR002818 ThiJ/PfpI JE55_RS11505 IPR006286 Peptidase C56, PfpI JE55_RS11505 IPR029062 Class I glutamine amidotransferase-like JE55_RS11510 IPR001608 Alanine racemase, N-terminal JE55_RS11510 IPR026956 D-serine dehydratase-like domain JE55_RS11510 IPR029066 PLP-binding barrel JE55_RS11515 IPR000281 Helix-turn-helix protein RpiR JE55_RS11515 IPR001347 Sugar isomerase (SIS) JE55_RS11515 IPR009057 Homeodomain-like JE55_RS11515 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11520 IPR011059 Metal-dependent hydrolase, composite domain JE55_RS11520 IPR013108 Amidohydrolase 3 JE55_RS11520 IPR023100 D-aminoacylase, insert domain JE55_RS11520 IPR032466 JE55_RS11520 JE55_RS11525 IPR006175 YjgF/Yer057p/UK114 family JE55_RS11525 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS11530 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 JE55_RS11530 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal JE55_RS11530 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF JE55_RS11535 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site JE55_RS11535 IPR001721 ACT-like domain JE55_RS11535 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS11535 IPR005787 Threonine dehydratase, biosynthetic JE55_RS11545 IPR004017 Cysteine-rich domain JE55_RS11545 IPR004113 FAD-linked oxidase, C-terminal JE55_RS11545 IPR006094 FAD linked oxidase, N-terminal JE55_RS11545 IPR009051 Alpha-helical ferredoxin JE55_RS11545 IPR016164 FAD-linked oxidase-like, C-terminal JE55_RS11545 IPR016166 FAD-binding, type 2 JE55_RS11545 IPR016167 FAD-binding, type 2, subdomain 1 JE55_RS11545 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS11545 IPR021817 Protein of unknown function DUF3400 JE55_RS11545 IPR022153 Protein of unknown function DUF3683 JE55_RS11550 IPR001310 Histidine triad (HIT) protein JE55_RS11550 IPR011146 HIT-like domain JE55_RS11555 IPR010376 Domain of unknown function, DUF971 JE55_RS11560 IPR004033 UbiE/COQ5 methyltransferase JE55_RS11560 IPR023576 UbiE/COQ5 methyltransferase, conserved site JE55_RS11560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS11565 IPR007379 Tim44-like domain JE55_RS11565 IPR032710 JE55_RS11565 JE55_RS11570 IPR003033 SCP2 sterol-binding domain JE55_RS11575 IPR004147 UbiB domain JE55_RS11575 IPR010232 Probable protein kinase UbiB JE55_RS11575 IPR011009 Protein kinase-like domain JE55_RS11580 IPR008854 TPMT family JE55_RS11580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS11585 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JE55_RS11590 IPR007462 Protein of unknown function DUF502 JE55_RS11595 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb JE55_RS11595 IPR004115 GAD-like domain JE55_RS11595 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JE55_RS11595 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JE55_RS11595 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type JE55_RS11595 IPR012340 Nucleic acid-binding, OB-fold JE55_RS11595 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like JE55_RS11595 IPR029351 GAD domain JE55_RS11600 IPR000086 NUDIX hydrolase domain JE55_RS11600 IPR003564 dATP pyrophosphohydrolase JE55_RS11600 IPR015797 NUDIX hydrolase domain-like JE55_RS11605 IPR001736 Phospholipase D/Transphosphatidylase JE55_RS11605 IPR025202 Phospholipase D-like domain JE55_RS11605 IPR030872 JE55_RS11605 JE55_RS11610 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS11610 IPR009057 Homeodomain-like JE55_RS11610 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS11610 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS11615 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS11615 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS11615 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS11615 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JE55_RS11615 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria JE55_RS11615 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain JE55_RS11620 IPR001753 Crotonase superfamily JE55_RS11620 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal JE55_RS11620 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding JE55_RS11620 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS11620 IPR013328 Dehydrogenase, multihelical JE55_RS11620 IPR016040 NAD(P)-binding domain JE55_RS11620 IPR029045 ClpP/crotonase-like domain JE55_RS11625 IPR002155 Thiolase JE55_RS11625 IPR016039 Thiolase-like JE55_RS11625 IPR020610 Thiolase, active site JE55_RS11625 IPR020613 Thiolase, conserved site JE55_RS11625 IPR020615 Thiolase, acyl-enzyme intermediate active site JE55_RS11625 IPR020616 Thiolase, N-terminal JE55_RS11625 IPR020617 Thiolase, C-terminal JE55_RS11630 IPR001753 Crotonase superfamily JE55_RS11630 IPR029045 ClpP/crotonase-like domain JE55_RS11635 IPR003786 Protein FdhD JE55_RS11635 IPR016193 Cytidine deaminase-like JE55_RS11640 IPR013481 Conserved hypothetical protein CHP02664, nitrate reductase-associated JE55_RS11645 IPR006683 Thioesterase superfamily JE55_RS11645 IPR029069 HotDog domain JE55_RS11650 IPR003439 ABC transporter-like JE55_RS11650 IPR003593 AAA+ ATPase domain JE55_RS11650 IPR011527 ABC transporter type 1, transmembrane domain JE55_RS11650 IPR017871 ABC transporter, conserved site JE55_RS11650 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11660 IPR005835 Nucleotidyl transferase JE55_RS11660 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS11665 IPR002575 Aminoglycoside phosphotransferase JE55_RS11665 IPR011009 Protein kinase-like domain JE55_RS11670 IPR007543 Organic solvent tolerance protein, C-terminal JE55_RS11670 IPR020889 Lipopolysaccharide assembly, LptD JE55_RS11675 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type JE55_RS11675 IPR015391 SurA N-terminal JE55_RS11675 IPR023034 Peptidyl-prolyl isomerase SurA JE55_RS11675 IPR027304 Trigger factor/SurA domain JE55_RS11680 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA JE55_RS11680 IPR024084 Isopropylmalate dehydrogenase-like domain JE55_RS11685 IPR001737 Ribosomal RNA adenine methylase transferase JE55_RS11685 IPR011530 Ribosomal RNA adenine dimethylase JE55_RS11685 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal JE55_RS11685 IPR023165 rRNA adenine dimethylase-like JE55_RS11685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS11690 IPR000620 Drug/metabolite transporter JE55_RS11695 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JE55_RS11695 IPR004361 Glyoxalase I JE55_RS11695 IPR018146 Glyoxalase I, conserved site JE55_RS11695 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS11700 IPR002725 Protein of unknown function DUF45 JE55_RS11705 IPR002123 Phospholipid/glycerol acyltransferase JE55_RS11710 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase JE55_RS11710 IPR006543 Histidinol-phosphate phosphatase JE55_RS11710 IPR006549 HAD-superfamily hydrolase,subfamily IIIA JE55_RS11710 IPR023214 HAD-like domain JE55_RS11715 IPR006674 HD domain JE55_RS11715 IPR008909 DALR anticodon binding JE55_RS11715 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JE55_RS11715 IPR015944 Glycine-tRNA ligase, beta subunit JE55_RS11720 IPR002310 Glycine-tRNA ligase, alpha subunit JE55_RS11725 IPR003010 Carbon-nitrogen hydrolase JE55_RS11725 IPR004563 Apolipoprotein N-acyltransferase JE55_RS11730 IPR000644 CBS domain JE55_RS11730 IPR005170 Transporter-associated domain JE55_RS11730 IPR016166 FAD-binding, type 2 JE55_RS11730 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JE55_RS11740 IPR006840 ChaC-like protein JE55_RS11740 IPR013024 Butirosin biosynthesis, BtrG-like JE55_RS11745 IPR002036 Endoribonuclease YbeY JE55_RS11745 IPR020549 Endoribonuclease YbeY, conserved site JE55_RS11745 IPR023091 Metalloprotease catalytic domain, predicted JE55_RS11750 IPR003714 PhoH-like protein JE55_RS11750 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11755 IPR002792 TRAM domain JE55_RS11755 IPR005839 Methylthiotransferase JE55_RS11755 IPR006463 tRNA-i(6)A37 modification enzyme MiaB JE55_RS11755 IPR006638 Elongator protein 3/MiaB/NifB JE55_RS11755 IPR007197 Radical SAM JE55_RS11755 IPR013848 Methylthiotransferase, N-terminal JE55_RS11755 IPR020612 Methylthiotransferase, conserved site JE55_RS11755 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS11755 IPR023970 Methylthiotransferase/radical SAM-type protein JE55_RS11760 IPR000847 Transcription regulator HTH, LysR JE55_RS11760 IPR005119 LysR, substrate-binding JE55_RS11760 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11765 IPR011701 Major facilitator superfamily JE55_RS11765 IPR020846 Major facilitator superfamily domain JE55_RS11770 IPR001387 Cro/C1-type helix-turn-helix domain JE55_RS11770 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS11770 IPR011051 RmlC-like cupin domain JE55_RS11770 IPR013096 Cupin 2, conserved barrel JE55_RS11770 IPR014710 RmlC-like jelly roll fold JE55_RS11775 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB JE55_RS11775 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS11780 IPR006439 HAD hydrolase, subfamily IA JE55_RS11780 IPR023214 HAD-like domain JE55_RS11785 IPR000620 Drug/metabolite transporter JE55_RS11790 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS11795 IPR001962 Asparagine synthase JE55_RS11795 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS11795 IPR017932 Glutamine amidotransferase type 2 domain JE55_RS11795 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS11800 IPR001986 Enolpyruvate transferase domain JE55_RS11800 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase JE55_RS11800 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JE55_RS11800 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site JE55_RS11805 IPR001986 Enolpyruvate transferase domain JE55_RS11805 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase JE55_RS11805 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JE55_RS11810 IPR006175 YjgF/Yer057p/UK114 family JE55_RS11810 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS11815 IPR000425 Major intrinsic protein JE55_RS11815 IPR023271 Aquaporin-like JE55_RS11820 IPR000577 JE55_RS11820 JE55_RS11820 IPR005999 Glycerol kinase JE55_RS11820 IPR018483 Carbohydrate kinase, FGGY, conserved site JE55_RS11820 IPR018484 Carbohydrate kinase, FGGY, N-terminal JE55_RS11820 IPR018485 Carbohydrate kinase, FGGY, C-terminal JE55_RS11825 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase JE55_RS11825 IPR006076 FAD dependent oxidoreductase JE55_RS11825 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS11825 IPR031656 JE55_RS11825 JE55_RS11835 IPR019056 Gene transfer agent, rcc01693-related JE55_RS11840 IPR001034 HTH DeoR N-terminal domain JE55_RS11840 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11840 IPR014036 DeoR C-terminal sensor domain JE55_RS11840 IPR018356 Transcription regulator, HTH DeoR-type, conserved site JE55_RS11845 IPR000101 Gamma-glutamyltranspeptidase JE55_RS11845 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS11850 IPR009078 Ferritin-like superfamily JE55_RS11850 IPR012348 Ribonucleotide reductase-related JE55_RS11855 IPR012349 FMN-binding split barrel JE55_RS11860 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site JE55_RS11860 IPR001650 Helicase, C-terminal JE55_RS11860 IPR011545 DEAD/DEAH box helicase domain JE55_RS11860 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JE55_RS11860 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11860 IPR028622 ATP-dependent RNA helicase RhlE JE55_RS11865 IPR009056 Cytochrome c-like domain JE55_RS11865 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit JE55_RS11870 IPR009056 Cytochrome c-like domain JE55_RS11870 IPR024167 Cytochrome c4 JE55_RS11875 IPR008457 Copper resistance D JE55_RS11880 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase JE55_RS11880 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain JE55_RS11880 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JE55_RS11880 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site JE55_RS11880 IPR029017 Enolase N-terminal domain-like JE55_RS11880 IPR029065 Enolase C-terminal domain-like JE55_RS11885 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V JE55_RS11885 IPR011057 Mss4-like JE55_RS11890 IPR025485 Domain of unknown function DUF4377 JE55_RS11895 IPR004843 Calcineurin-like phosphoesterase domain, apaH type JE55_RS11895 IPR008963 Purple acid phosphatase-like, N-terminal JE55_RS11895 IPR015914 Purple acid phosphatase, N-terminal JE55_RS11895 IPR029052 Metallo-dependent phosphatase-like JE55_RS11900 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS11900 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS11900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS11900 IPR005330 MHYT JE55_RS11905 IPR001789 Signal transduction response regulator, receiver domain JE55_RS11905 IPR006674 HD domain JE55_RS11905 IPR011006 CheY-like superfamily JE55_RS11915 IPR025419 Domain of unknown function DUF4142 JE55_RS11920 IPR000014 PAS domain JE55_RS11920 IPR001610 PAC motif JE55_RS11920 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JE55_RS11920 IPR013655 PAS fold-3 JE55_RS11930 IPR006094 FAD linked oxidase, N-terminal JE55_RS11930 IPR015213 Cholesterol oxidase, substrate-binding JE55_RS11930 IPR016164 FAD-linked oxidase-like, C-terminal JE55_RS11930 IPR016166 FAD-binding, type 2 JE55_RS11930 IPR016167 FAD-binding, type 2, subdomain 1 JE55_RS11930 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JE55_RS11930 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain JE55_RS11930 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JE55_RS11940 IPR005119 LysR, substrate-binding JE55_RS11945 IPR001763 Rhodanese-like domain JE55_RS11945 IPR017582 tRNA 2-selenouridine synthase JE55_RS11945 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11960 IPR003439 ABC transporter-like JE55_RS11960 IPR003593 AAA+ ATPase domain JE55_RS11960 IPR017871 ABC transporter, conserved site JE55_RS11960 IPR018632 C-terminal AAA-associated domain JE55_RS11960 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11965 IPR000515 MetI-like domain JE55_RS11980 IPR007815 Erythromycin esterase JE55_RS11985 IPR002925 Dienelactone hydrolase JE55_RS11985 IPR029058 Alpha/Beta hydrolase fold JE55_RS11990 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal JE55_RS11990 IPR006405 Nicotinate phosphoribosyltransferase pncB type JE55_RS11990 IPR007229 Nicotinate phosphoribosyltransferase family JE55_RS11995 IPR000836 Phosphoribosyltransferase domain JE55_RS11995 IPR029057 Phosphoribosyltransferase-like JE55_RS12000 IPR001264 Glycosyl transferase, family 51 JE55_RS12000 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12000 IPR023346 Lysozyme-like domain JE55_RS12010 IPR009056 Cytochrome c-like domain JE55_RS12010 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit JE55_RS12020 IPR000298 Cytochrome c oxidase subunit III domain JE55_RS12020 IPR000883 Cytochrome c oxidase subunit I JE55_RS12020 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle JE55_RS12020 IPR014241 Cytochrome c oxidase, subunit I bacterial type JE55_RS12020 IPR023616 Cytochrome c oxidase, subunit I domain JE55_RS12025 IPR001505 Copper centre Cu(A) JE55_RS12025 IPR002429 Cytochrome c oxidase subunit II C-terminal JE55_RS12025 IPR008972 Cupredoxin JE55_RS12025 IPR009056 Cytochrome c-like domain JE55_RS12025 IPR014222 Cytochrome c oxidase, subunit II JE55_RS12030 IPR000399 TPP-binding enzyme, conserved site JE55_RS12030 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JE55_RS12030 IPR012000 Thiamine pyrophosphate enzyme, central domain JE55_RS12030 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JE55_RS12030 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS12030 IPR029061 Thiamin diphosphate-binding fold JE55_RS12035 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase JE55_RS12035 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain JE55_RS12035 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JE55_RS12035 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site JE55_RS12035 IPR029017 Enolase N-terminal domain-like JE55_RS12035 IPR029065 Enolase C-terminal domain-like JE55_RS12045 IPR027056 Gluconate 2-dehydrogenase subunit 3 JE55_RS12050 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal JE55_RS12050 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal JE55_RS12050 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS12055 IPR010272 Type VI secretion system, VCA0110 JE55_RS12065 IPR002692 Penicillin amidase-like JE55_RS12065 IPR014395 Penicillin/cephalosporin acylase JE55_RS12065 IPR023343 Penicillin amidase type, domain1 JE55_RS12065 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS12070 IPR000847 Transcription regulator HTH, LysR JE55_RS12070 IPR005119 LysR, substrate-binding JE55_RS12070 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12075 IPR001789 Signal transduction response regulator, receiver domain JE55_RS12075 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12075 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS12075 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS12075 IPR011006 CheY-like superfamily JE55_RS12080 IPR000572 Oxidoreductase, molybdopterin-binding domain JE55_RS12085 IPR001789 Signal transduction response regulator, receiver domain JE55_RS12085 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS12085 IPR011006 CheY-like superfamily JE55_RS12085 IPR013975 Transcription regulator BetR, N-terminal JE55_RS12095 IPR026881 WYL domain JE55_RS12105 IPR025449 Protein of unknown function DUF4194 JE55_RS12110 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12115 IPR024534 Domain of unknown function DUF2220 JE55_RS12120 IPR002514 Transposase IS3/IS911family JE55_RS12120 IPR009057 Homeodomain-like JE55_RS12125 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal JE55_RS12125 IPR003346 Transposase, IS116/IS110/IS902 JE55_RS12130 IPR001584 Integrase, catalytic core JE55_RS12130 IPR012337 Ribonuclease H-like domain JE55_RS12130 IPR025948 HTH-like domain JE55_RS12135 IPR029060 PIN domain-like JE55_RS12150 IPR005828 General substrate transporter JE55_RS12150 IPR005829 Sugar transporter, conserved site JE55_RS12150 IPR020846 Major facilitator superfamily domain JE55_RS12155 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12155 IPR003660 HAMP linker domain JE55_RS12155 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS12155 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS12155 IPR013727 Two-component sensor kinase N-terminal JE55_RS12160 IPR001789 Signal transduction response regulator, receiver domain JE55_RS12160 IPR001867 Signal transduction response regulator, C-terminal JE55_RS12160 IPR011006 CheY-like superfamily JE55_RS12160 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12165 IPR003593 AAA+ ATPase domain JE55_RS12165 IPR013765 DNA recombination and repair protein RecA JE55_RS12165 IPR020584 DNA recombination/repair protein RecA, conserved site JE55_RS12165 IPR023400 DNA recombination and repair protein RecA, C-terminal JE55_RS12165 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12170 IPR003783 Regulatory protein RecX JE55_RS12170 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12175 IPR021312 Protein of unknown function DUF2889 JE55_RS12180 IPR005809 Succinyl-CoA synthetase, beta subunit JE55_RS12180 IPR005811 ATP-citrate lyase/succinyl-CoA ligase JE55_RS12180 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type JE55_RS12180 IPR013815 ATP-grasp fold, subdomain 1 JE55_RS12180 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS12180 IPR016102 Succinyl-CoA synthetase-like JE55_RS12180 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site JE55_RS12185 IPR003781 CoA-binding JE55_RS12185 IPR005810 Succinyl-CoA ligase, alpha subunit JE55_RS12185 IPR005811 ATP-citrate lyase/succinyl-CoA ligase JE55_RS12185 IPR016040 NAD(P)-binding domain JE55_RS12185 IPR016102 Succinyl-CoA synthetase-like JE55_RS12185 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site JE55_RS12190 IPR005496 Integral membrane protein TerC JE55_RS12190 IPR022301 Integral membrane protein YjbE JE55_RS12195 IPR001082 Fimbrial protein pilin JE55_RS12195 IPR012902 Prokaryotic N-terminal methylation site JE55_RS12200 IPR007016 O-antigen ligase-related JE55_RS12200 IPR021797 Protein of unknown function DUF3366 JE55_RS12200 IPR031726 JE55_RS12200 JE55_RS12205 IPR019637 Protein of unknown function DUF2501 JE55_RS12215 IPR006260 TonB, C-terminal JE55_RS12220 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain JE55_RS12220 IPR023045 Molybdenum cofactor biosynthesis C JE55_RS12220 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type JE55_RS12225 IPR001915 Peptidase M48 JE55_RS12225 IPR030873 JE55_RS12225 JE55_RS12230 IPR021332 Protein of unknown function DUF2944 JE55_RS12235 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS12235 IPR012020 AB-hydrolase YheT, putative JE55_RS12235 IPR029058 Alpha/Beta hydrolase fold JE55_RS12240 IPR009959 Polyketide cyclase SnoaL-like domain JE55_RS12240 IPR032710 JE55_RS12240 JE55_RS12245 IPR002201 Glycosyl transferase, family 9 JE55_RS12245 IPR011910 Lipopolysaccharide heptosyltransferase II JE55_RS12250 IPR019401 Zinc finger, CHCC-type JE55_RS12255 IPR001544 Aminotransferase, class IV JE55_RS12255 IPR005785 Branched-chain amino acid aminotransferase I JE55_RS12255 IPR018300 Aminotransferase, class IV, conserved site JE55_RS12260 IPR011606 Branched-chain amino acid transport, permease JE55_RS12265 IPR008407 Branched-chain amino acid transport, AzlD JE55_RS12270 IPR001576 Phosphoglycerate kinase JE55_RS12270 IPR015824 Phosphoglycerate kinase, N-terminal JE55_RS12270 IPR015901 Phosphoglycerate kinase, C-terminal JE55_RS12270 IPR015911 Phosphoglycerate kinase, conserved site JE55_RS12275 IPR001697 Pyruvate kinase JE55_RS12275 IPR011037 Pyruvate kinase-like, insert domain JE55_RS12275 IPR015793 Pyruvate kinase, barrel JE55_RS12275 IPR015794 Pyruvate kinase, alpha/beta JE55_RS12275 IPR015795 Pyruvate kinase, C-terminal JE55_RS12275 IPR015806 Pyruvate kinase, beta-barrel insert domain JE55_RS12275 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JE55_RS12280 IPR000771 Ketose-bisphosphate aldolase, class-II JE55_RS12280 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype JE55_RS12280 IPR013785 Aldolase-type TIM barrel JE55_RS12285 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase JE55_RS12285 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS12285 IPR018236 SAICAR synthetase, conserved site JE55_RS12285 IPR028923 SAICAR synthetase/ADE2, N-terminal JE55_RS12290 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain JE55_RS12290 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE JE55_RS12295 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type JE55_RS12295 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit JE55_RS12295 IPR011054 Rudiment single hybrid motif JE55_RS12295 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS12295 IPR016185 Pre-ATP-grasp domain JE55_RS12300 IPR005145 Putative GTP-binding controlling metal-binding domain JE55_RS12300 IPR006070 YrdC-like domain JE55_RS12300 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 JE55_RS12300 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS12305 IPR001087 Lipase, GDSL JE55_RS12305 IPR013830 JE55_RS12305 JE55_RS12310 IPR006694 Fatty acid hydroxylase JE55_RS12315 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C JE55_RS12315 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12320 IPR001789 Signal transduction response regulator, receiver domain JE55_RS12320 IPR001867 Signal transduction response regulator, C-terminal JE55_RS12320 IPR011006 CheY-like superfamily JE55_RS12320 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12325 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12325 IPR003660 HAMP linker domain JE55_RS12325 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS12325 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS12335 IPR001478 PDZ domain JE55_RS12335 IPR001940 Peptidase S1C JE55_RS12335 IPR009003 Trypsin-like cysteine/serine peptidase domain JE55_RS12335 IPR011782 Peptidase S1C, Do JE55_RS12340 IPR013784 Carbohydrate-binding-like fold JE55_RS12340 IPR014766 Carboxypeptidase, regulatory domain JE55_RS12345 IPR007361 Protein of unknown function DUF427 JE55_RS12350 IPR010419 Carbon monoxide dehydrogenase subunit G JE55_RS12350 IPR023393 START-like domain JE55_RS12355 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS12355 IPR009057 Homeodomain-like JE55_RS12355 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS12355 IPR013572 Transcription regulator MAATS, C-terminal JE55_RS12355 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS12355 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JE55_RS12360 IPR006143 RND efflux pump, membrane fusion protein JE55_RS12360 IPR032317 JE55_RS12360 JE55_RS12365 IPR001036 Acriflavin resistance protein JE55_RS12365 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 JE55_RS12365 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS12370 IPR003423 Outer membrane efflux protein JE55_RS12370 IPR010131 RND efflux system, outer membrane lipoprotein, NodT JE55_RS12380 IPR006042 Xanthine/uracil permease JE55_RS12380 IPR006043 Xanthine/uracil/vitamin C permease JE55_RS12380 IPR017588 Xanthine permease JE55_RS12385 IPR000577 JE55_RS12385 JE55_RS12385 IPR018484 Carbohydrate kinase, FGGY, N-terminal JE55_RS12385 IPR018485 Carbohydrate kinase, FGGY, C-terminal JE55_RS12390 IPR002818 ThiJ/PfpI JE55_RS12390 IPR009057 Homeodomain-like JE55_RS12390 IPR018060 DNA binding HTH domain, AraC-type JE55_RS12390 IPR029062 Class I glutamine amidotransferase-like JE55_RS12395 IPR002085 Alcohol dehydrogenase superfamily, zinc-type JE55_RS12395 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site JE55_RS12395 IPR011032 GroES (chaperonin 10)-like JE55_RS12395 IPR013149 Alcohol dehydrogenase, C-terminal JE55_RS12395 IPR013154 Alcohol dehydrogenase GroES-like JE55_RS12395 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase JE55_RS12395 IPR016040 NAD(P)-binding domain JE55_RS12395 IPR020843 Polyketide synthase, enoylreductase JE55_RS12400 IPR000801 Putative esterase JE55_RS12400 IPR014186 S-formylglutathione hydrolase JE55_RS12400 IPR029058 Alpha/Beta hydrolase fold JE55_RS12405 IPR001626 ABC-3 JE55_RS12405 IPR029022 ABC transporter, BtuC-like JE55_RS12410 IPR003439 ABC transporter-like JE55_RS12410 IPR003593 AAA+ ATPase domain JE55_RS12410 IPR017871 ABC transporter, conserved site JE55_RS12410 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12415 IPR006127 Periplasmic solute binding protein family JE55_RS12415 IPR006128 Adhesion lipoprotein JE55_RS12420 IPR002481 Ferric-uptake regulator JE55_RS12420 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12425 IPR002347 Glucose/ribitol dehydrogenase JE55_RS12425 IPR016040 NAD(P)-binding domain JE55_RS12425 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS12430 IPR011611 Carbohydrate kinase PfkB JE55_RS12430 IPR029056 Ribokinase-like JE55_RS12435 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ JE55_RS12435 IPR013785 Aldolase-type TIM barrel JE55_RS12440 IPR006059 Bacterial extracellular solute-binding, family 1 JE55_RS12445 IPR000515 MetI-like domain JE55_RS12450 IPR000515 MetI-like domain JE55_RS12455 IPR006439 HAD hydrolase, subfamily IA JE55_RS12455 IPR023214 HAD-like domain JE55_RS12460 IPR003439 ABC transporter-like JE55_RS12460 IPR003593 AAA+ ATPase domain JE55_RS12460 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS12460 IPR012340 Nucleic acid-binding, OB-fold JE55_RS12460 IPR013611 Transport-associated OB, type 2 JE55_RS12460 IPR017871 ABC transporter, conserved site JE55_RS12460 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12465 IPR023214 HAD-like domain JE55_RS12470 IPR000847 Transcription regulator HTH, LysR JE55_RS12470 IPR005119 LysR, substrate-binding JE55_RS12470 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12475 IPR001466 Beta-lactamase-related JE55_RS12475 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12480 IPR011701 Major facilitator superfamily JE55_RS12480 IPR020846 Major facilitator superfamily domain JE55_RS12485 IPR007324 Sugar-binding domain, putative JE55_RS12490 IPR000577 JE55_RS12490 JE55_RS12490 IPR006000 Xylulokinase JE55_RS12490 IPR018483 Carbohydrate kinase, FGGY, conserved site JE55_RS12490 IPR018484 Carbohydrate kinase, FGGY, N-terminal JE55_RS12490 IPR018485 Carbohydrate kinase, FGGY, C-terminal JE55_RS12495 IPR000669 Mannitol dehydrogenase JE55_RS12495 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS12495 IPR013118 Mannitol dehydrogenase, C-terminal JE55_RS12495 IPR013131 Mannitol dehydrogenase, N-terminal JE55_RS12495 IPR013328 Dehydrogenase, multihelical JE55_RS12495 IPR016040 NAD(P)-binding domain JE55_RS12500 IPR000847 Transcription regulator HTH, LysR JE55_RS12500 IPR005119 LysR, substrate-binding JE55_RS12500 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12505 IPR000399 TPP-binding enzyme, conserved site JE55_RS12505 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JE55_RS12505 IPR012000 Thiamine pyrophosphate enzyme, central domain JE55_RS12505 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JE55_RS12505 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS12505 IPR029061 Thiamin diphosphate-binding fold JE55_RS12510 IPR015590 Aldehyde dehydrogenase domain JE55_RS12510 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS12510 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS12510 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS12510 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JE55_RS12515 IPR003710 Ketopantoate reductase ApbA/PanE JE55_RS12515 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS12515 IPR013328 Dehydrogenase, multihelical JE55_RS12515 IPR013332 Ketopantoate reductase, N-terminal domain JE55_RS12515 IPR013752 Ketopantoate reductase, C-terminal domain JE55_RS12515 IPR016040 NAD(P)-binding domain JE55_RS12530 IPR004981 Tryptophan 2,3-dioxygenase JE55_RS12530 IPR017485 Tryptophan 2,3-dioxygenase, bacterial JE55_RS12535 IPR000192 Aminotransferase class V domain JE55_RS12535 IPR010111 Kynureninase JE55_RS12535 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS12535 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS12535 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS12540 IPR007325 Kynurenine formamidase JE55_RS12540 IPR017484 Kynurenine formamidase, bacteria JE55_RS12545 IPR000485 AsnC-type HTH domain JE55_RS12545 IPR011008 Dimeric alpha-beta barrel JE55_RS12545 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12545 IPR019887 Transcription regulator AsnC-type, C-terminal JE55_RS12545 IPR019888 Transcription regulator AsnC-type JE55_RS12550 IPR002563 Flavin reductase-like, FMN-binding JE55_RS12550 IPR012349 FMN-binding split barrel JE55_RS12560 IPR002569 Peptide methionine sulphoxide reductase MsrA JE55_RS12560 IPR028427 Peptide methionine sulfoxide reductase JE55_RS12570 IPR002763 Protein of unknown function DUF72 JE55_RS12575 IPR003333 Mycolic acid cyclopropane synthase JE55_RS12575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS12580 IPR000659 Pyridoxamine 5'-phosphate oxidase JE55_RS12580 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain JE55_RS12580 IPR012349 FMN-binding split barrel JE55_RS12580 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal JE55_RS12580 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site JE55_RS12585 IPR000594 UBA/THIF-type NAD/FAD binding fold JE55_RS12585 IPR016040 NAD(P)-binding domain JE55_RS12590 IPR005746 Thioredoxin JE55_RS12590 IPR011990 Tetratricopeptide-like helical domain JE55_RS12590 IPR012336 Thioredoxin-like fold JE55_RS12590 IPR013766 Thioredoxin domain JE55_RS12590 IPR017937 Thioredoxin, conserved site JE55_RS12595 IPR003829 Pirin, N-terminal domain JE55_RS12595 IPR008778 Pirin, C-terminal domain JE55_RS12595 IPR011051 RmlC-like cupin domain JE55_RS12595 IPR012093 Pirin JE55_RS12595 IPR014710 RmlC-like jelly roll fold JE55_RS12600 IPR000620 Drug/metabolite transporter JE55_RS12605 IPR002508 Cell wall hydrolase/autolysin, catalytic JE55_RS12605 IPR021731 AMIN domain JE55_RS12610 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE JE55_RS12610 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12615 IPR004453 Epoxyqueuosine reductase QueG JE55_RS12615 IPR009051 Alpha-helical ferredoxin JE55_RS12615 IPR013542 Domain of unknown function DUF1730 JE55_RS12615 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS12620 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site JE55_RS12620 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain JE55_RS12620 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12620 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding JE55_RS12625 IPR002104 Integrase, catalytic JE55_RS12625 IPR004107 Integrase, SAM-like, N-terminal JE55_RS12625 IPR010998 Integrase, Lambda-type, N-terminal JE55_RS12625 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS12625 IPR011932 Tyrosine recombinase XerD JE55_RS12625 IPR013762 Integrase-like, catalytic core JE55_RS12625 IPR023009 Tyrosine recombinase XerC/XerD JE55_RS12625 IPR023109 Integrase/recombinase, N-terminal JE55_RS12630 IPR000873 AMP-dependent synthetase/ligase JE55_RS12630 IPR020845 AMP-binding, conserved site JE55_RS12630 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS12635 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC JE55_RS12635 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JE55_RS12640 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY JE55_RS12645 IPR007551 Protein of unknown function DUF520 JE55_RS12650 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase JE55_RS12650 IPR006094 FAD linked oxidase, N-terminal JE55_RS12650 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal JE55_RS12650 IPR016166 FAD-binding, type 2 JE55_RS12650 IPR016167 FAD-binding, type 2, subdomain 1 JE55_RS12650 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JE55_RS12655 IPR002292 Ornithine/putrescine carbamoyltransferase JE55_RS12655 IPR006130 Aspartate/ornithine carbamoyltransferase JE55_RS12655 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain JE55_RS12655 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding JE55_RS12655 IPR024904 Ornithine carbamoyltransferase JE55_RS12660 IPR021969 Protein of unknown function DUF3579 JE55_RS12665 IPR002583 Ribosomal protein S20 JE55_RS12670 IPR004268 Flagellin assembly, membrane protein MviN JE55_RS12675 IPR011990 Tetratricopeptide-like helical domain JE55_RS12675 IPR032698 JE55_RS12675 JE55_RS12680 IPR002347 Glucose/ribitol dehydrogenase JE55_RS12680 IPR016040 NAD(P)-binding domain JE55_RS12680 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS12685 IPR000850 Adenylate kinase/UMP-CMP kinase JE55_RS12685 IPR006259 Adenylate kinase subfamily JE55_RS12685 IPR007862 Adenylate kinase, active site lid domain JE55_RS12685 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12690 IPR003329 Acylneuraminate cytidylyltransferase JE55_RS12690 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase JE55_RS12690 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS12695 IPR005651 Uncharacterised protein family UPF0434/Trm112 JE55_RS12695 IPR005735 Zinc finger, LSD1-type JE55_RS12700 IPR003758 Tetraacyldisaccharide 4'-kinase JE55_RS12700 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12705 IPR003753 Exonuclease VII, large subunit JE55_RS12705 IPR020579 Exonuclease VII, large subunit, C-terminal JE55_RS12705 IPR025824 OB-fold nucleic acid binding domain JE55_RS12710 IPR001189 Manganese/iron superoxide dismutase JE55_RS12710 IPR019831 Manganese/iron superoxide dismutase, N-terminal JE55_RS12710 IPR019832 Manganese/iron superoxide dismutase, C-terminal JE55_RS12710 IPR019833 Manganese/iron superoxide dismutase, binding site JE55_RS12715 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid JE55_RS12725 IPR003370 Chromate transporter JE55_RS12725 IPR014047 Chromate transporter, long chain JE55_RS12730 IPR000595 Cyclic nucleotide-binding domain JE55_RS12730 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12730 IPR012318 Helix-turn-helix motif, Crp-type JE55_RS12730 IPR014710 RmlC-like jelly roll fold JE55_RS12730 IPR018490 Cyclic nucleotide-binding-like JE55_RS12735 IPR009305 Protein of unknown function DUF962 JE55_RS12740 IPR003710 Ketopantoate reductase ApbA/PanE JE55_RS12740 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS12740 IPR013328 Dehydrogenase, multihelical JE55_RS12740 IPR013332 Ketopantoate reductase, N-terminal domain JE55_RS12740 IPR013752 Ketopantoate reductase, C-terminal domain JE55_RS12740 IPR016040 NAD(P)-binding domain JE55_RS12745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS12750 IPR001633 EAL domain JE55_RS12750 IPR029151 Periplasmic sensor domain-like JE55_RS12755 IPR004638 Drug resistance transporter EmrB/QacA subfamily JE55_RS12755 IPR011701 Major facilitator superfamily JE55_RS12755 IPR020846 Major facilitator superfamily domain JE55_RS12760 IPR011051 RmlC-like cupin domain JE55_RS12760 IPR021317 Protein of unknown function DUF2917 JE55_RS12765 IPR002020 Citrate synthase-like JE55_RS12765 IPR009061 DNA binding domain, putative JE55_RS12765 IPR016142 Citrate synthase-like, large alpha subdomain JE55_RS12765 IPR016143 Citrate synthase-like, small alpha subdomain JE55_RS12775 IPR000524 Transcription regulator HTH, GntR JE55_RS12775 IPR011663 UbiC transcription regulator-associated JE55_RS12775 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12775 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS12780 IPR001395 Aldo/keto reductase JE55_RS12780 IPR020471 Aldo/keto reductase subgroup JE55_RS12780 IPR023210 NADP-dependent oxidoreductase domain JE55_RS12800 IPR000640 Translation elongation factor EFG, V domain JE55_RS12800 IPR000795 Elongation factor, GTP-binding domain JE55_RS12800 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 JE55_RS12800 IPR004540 Translation elongation factor EFG/EF2 JE55_RS12800 IPR005225 Small GTP-binding protein domain JE55_RS12800 IPR005517 Translation elongation factor EFG/EF2, domain IV JE55_RS12800 IPR009000 Translation protein, beta-barrel domain JE55_RS12800 IPR009022 Elongation factor G, III-V domain JE55_RS12800 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS12800 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS12800 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12800 IPR031157 JE55_RS12800 JE55_RS12805 IPR003795 Protein of unknown function DUF192 JE55_RS12810 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JE55_RS12810 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JE55_RS12810 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JE55_RS12810 IPR020103 Pseudouridine synthase, catalytic domain JE55_RS12815 IPR001804 Isocitrate and isopropylmalate dehydrogenases family JE55_RS12815 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic JE55_RS12815 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site JE55_RS12815 IPR024084 Isopropylmalate dehydrogenase-like domain JE55_RS12820 IPR002355 Multicopper oxidase, copper-binding site JE55_RS12820 IPR008972 Cupredoxin JE55_RS12820 IPR011706 Multicopper oxidase, type 2 JE55_RS12820 IPR011707 Multicopper oxidase, type 3 JE55_RS12825 IPR002059 Cold-shock protein, DNA-binding JE55_RS12825 IPR011129 Cold shock protein JE55_RS12825 IPR012156 Cold shock, CspA JE55_RS12825 IPR012340 Nucleic acid-binding, OB-fold JE55_RS12825 IPR019844 Cold-shock conserved site JE55_RS12830 IPR003769 Adaptor protein ClpS, core JE55_RS12830 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JE55_RS12830 IPR022935 ATP-dependent Clp protease adaptor protein ClpS JE55_RS12835 IPR001270 ClpA/B family JE55_RS12835 IPR003593 AAA+ ATPase domain JE55_RS12835 IPR003959 ATPase, AAA-type, core JE55_RS12835 IPR004176 Clp, N-terminal JE55_RS12835 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA JE55_RS12835 IPR018368 ClpA/B, conserved site 1 JE55_RS12835 IPR019489 Clp ATPase, C-terminal JE55_RS12835 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12835 IPR028299 ClpA/B, conserved site 2 JE55_RS12840 IPR002293 Amino acid/polyamine transporter I JE55_RS12840 IPR004840 Amino acid permease, conserved site JE55_RS12840 IPR004841 Amino acid permease/ SLC12A domain JE55_RS12850 IPR007136 Protein of unknown function DUF347 JE55_RS12855 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase JE55_RS12855 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase JE55_RS12855 IPR029054 dUTPase-like JE55_RS12860 IPR003382 Flavoprotein JE55_RS12860 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC JE55_RS12860 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal JE55_RS12865 IPR001872 Peptidase A8, signal peptidase II JE55_RS12870 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JE55_RS12870 IPR002300 Aminoacyl-tRNA synthetase, class Ia JE55_RS12870 IPR002301 Isoleucine-tRNA ligase JE55_RS12870 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JE55_RS12870 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JE55_RS12870 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase JE55_RS12870 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JE55_RS12870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS12870 IPR023585 Isoleucine-tRNA ligase, type 1 JE55_RS12875 IPR002606 Riboflavin kinase, bacterial JE55_RS12875 IPR004821 Cytidyltransferase-like domain JE55_RS12875 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS12875 IPR015864 FAD synthetase JE55_RS12875 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic JE55_RS12875 IPR023465 Riboflavin kinase domain JE55_RS12875 IPR023468 Riboflavin kinase JE55_RS12880 IPR002376 Formyl transferase, N-terminal JE55_RS12880 IPR004607 Phosphoribosylglycinamide formyltransferase JE55_RS12885 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p JE55_RS12885 IPR023267 RNA (C5-cytosine) methyltransferase JE55_RS12885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS12890 IPR006685 Mechanosensitive ion channel MscS JE55_RS12890 IPR010920 Like-Sm (LSM) domain JE55_RS12890 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 JE55_RS12890 IPR011066 Mechanosensitive ion channel MscS, C-terminal JE55_RS12895 IPR002560 Transposase IS204/IS1001/IS1096/IS1165 JE55_RS12895 IPR005804 Fatty acid desaturase, type 1 JE55_RS12895 IPR015876 Fatty acid desaturase, type 1, core JE55_RS12900 IPR003473 Quinolinate synthetase A JE55_RS12900 IPR023513 Quinolinate synthase A, type 1 JE55_RS12905 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal JE55_RS12905 IPR004393 Nicotinate-nucleotide pyrophosphorylase JE55_RS12905 IPR013785 Aldolase-type TIM barrel JE55_RS12905 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal JE55_RS12905 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD JE55_RS12915 IPR003953 FAD binding domain JE55_RS12915 IPR005288 L-aspartate oxidase JE55_RS12915 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal JE55_RS12915 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS12915 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain JE55_RS12915 IPR030664 JE55_RS12915 JE55_RS12920 IPR001705 Ribosomal protein L33 JE55_RS12920 IPR011332 Zinc-binding ribosomal protein JE55_RS12920 IPR018264 Ribosomal protein L33, conserved site JE55_RS12925 IPR001383 Ribosomal protein L28 JE55_RS12925 IPR026569 Ribosomal protein L28/L24 JE55_RS12930 IPR001405 RadC protein JE55_RS12930 IPR010994 RuvA domain 2-like JE55_RS12930 IPR020891 Uncharacterised protein family UPF0758, conserved site JE55_RS12930 IPR025657 RadC-like JAB domain JE55_RS12935 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain JE55_RS12940 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase JE55_RS12950 IPR001851 ABC transporter, permease JE55_RS12955 IPR001851 ABC transporter, permease JE55_RS12960 IPR003439 ABC transporter-like JE55_RS12960 IPR003593 AAA+ ATPase domain JE55_RS12960 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12960 IPR032823 JE55_RS12960 JE55_RS12965 IPR003439 ABC transporter-like JE55_RS12965 IPR003593 AAA+ ATPase domain JE55_RS12965 IPR017871 ABC transporter, conserved site JE55_RS12965 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12965 IPR030660 JE55_RS12965 JE55_RS12970 IPR019268 Protein of unknown function DUF2278 JE55_RS12975 IPR000182 GNAT domain JE55_RS12975 IPR016181 Acyl-CoA N-acyltransferase JE55_RS12980 IPR004636 Acetylornithine/Succinylornithine transaminase family JE55_RS12980 IPR005814 Aminotransferase class-III JE55_RS12980 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS12980 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS12980 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS12985 IPR001041 2Fe-2S ferredoxin-type domain JE55_RS12985 IPR001221 Phenol hydroxylase reductase JE55_RS12985 IPR001433 Oxidoreductase FAD/NAD(P)-binding JE55_RS12985 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase JE55_RS12985 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site JE55_RS12985 IPR008333 Oxidoreductase, FAD-binding domain JE55_RS12985 IPR012675 Beta-grasp domain JE55_RS12985 IPR017938 Riboflavin synthase-like beta-barrel JE55_RS12990 IPR003148 Regulator of K+ conductance, N-terminal JE55_RS12990 IPR016040 NAD(P)-binding domain JE55_RS13000 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JE55_RS13000 IPR002942 RNA-binding S4 domain JE55_RS13000 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JE55_RS13000 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JE55_RS13000 IPR020103 Pseudouridine synthase, catalytic domain JE55_RS13005 IPR007348 CopC domain JE55_RS13005 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like JE55_RS13005 IPR014756 Immunoglobulin E-set JE55_RS13005 IPR032694 JE55_RS13005 JE55_RS13010 IPR000847 Transcription regulator HTH, LysR JE55_RS13010 IPR005119 LysR, substrate-binding JE55_RS13010 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13015 IPR000847 Transcription regulator HTH, LysR JE55_RS13015 IPR005119 LysR, substrate-binding JE55_RS13015 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13020 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS13020 IPR000639 Epoxide hydrolase-like JE55_RS13020 IPR029058 Alpha/Beta hydrolase fold JE55_RS13025 IPR005163 3-alpha domain JE55_RS13025 IPR005302 Molybdenum cofactor sulfurase, C-terminal JE55_RS13025 IPR011037 Pyruvate kinase-like, insert domain JE55_RS13025 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like JE55_RS13030 IPR002220 DapA-like JE55_RS13030 IPR013785 Aldolase-type TIM barrel JE55_RS13035 IPR001303 Class II aldolase/adducin N-terminal JE55_RS13040 IPR001387 Cro/C1-type helix-turn-helix domain JE55_RS13040 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS13040 IPR011051 RmlC-like cupin domain JE55_RS13040 IPR013096 Cupin 2, conserved barrel JE55_RS13040 IPR014710 RmlC-like jelly roll fold JE55_RS13060 IPR000847 Transcription regulator HTH, LysR JE55_RS13060 IPR005119 LysR, substrate-binding JE55_RS13060 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13065 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain JE55_RS13065 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site JE55_RS13065 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain JE55_RS13070 IPR008318 Uncharacterised conserved protein UCP030820 JE55_RS13075 IPR002500 Phosphoadenosine phosphosulphate reductase JE55_RS13075 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase JE55_RS13075 IPR011798 Adenosine 5'-phosphosulphate reductase JE55_RS13075 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13080 IPR002500 Phosphoadenosine phosphosulphate reductase JE55_RS13080 IPR011784 Sulphate adenylyltransferase, small subunit JE55_RS13080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13085 IPR000795 Elongation factor, GTP-binding domain JE55_RS13085 IPR009000 Translation protein, beta-barrel domain JE55_RS13085 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JE55_RS13085 IPR011779 Sulphate adenylyltransferase, large subunit JE55_RS13085 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13085 IPR031157 JE55_RS13085 JE55_RS13090 IPR000878 Tetrapyrrole methylase JE55_RS13090 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site JE55_RS13090 IPR006366 Uroporphyrin-III C-methyltransferase JE55_RS13090 IPR014776 Tetrapyrrole methylase, subdomain 2 JE55_RS13090 IPR014777 Tetrapyrrole methylase, subdomain 1 JE55_RS13095 IPR008490 Transposase InsH, N-terminal JE55_RS13095 IPR025668 Transposase DDE domain JE55_RS13100 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX JE55_RS13105 IPR005495 Permease YjgP/YjgQ, predicted JE55_RS13105 IPR030923 JE55_RS13105 JE55_RS13110 IPR005495 Permease YjgP/YjgQ, predicted JE55_RS13110 IPR030922 JE55_RS13110 JE55_RS13115 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal JE55_RS13115 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal JE55_RS13115 IPR011356 Leucine aminopeptidase/peptidase B JE55_RS13115 IPR023042 Peptidase M17, leucine aminopeptidase JE55_RS13120 IPR007459 DNA polymerase III chi subunit, HolC JE55_RS13125 IPR018924 Protein of unknown function DUF2486 JE55_RS13130 IPR002324 Cytochrome c, class ID JE55_RS13130 IPR009056 Cytochrome c-like domain JE55_RS13135 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase JE55_RS13135 IPR004404 Dihydroxy-acid dehydratase JE55_RS13135 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel JE55_RS13135 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site JE55_RS13140 IPR000847 Transcription regulator HTH, LysR JE55_RS13140 IPR005119 LysR, substrate-binding JE55_RS13140 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13145 IPR001640 Prolipoprotein diacylglyceryl transferase JE55_RS13150 IPR007497 Protein of unknown function DUF541 JE55_RS13155 IPR002740 EVE domain JE55_RS13155 IPR015947 PUA-like domain JE55_RS13160 IPR007838 Cell division protein ZapA-like JE55_RS13160 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain JE55_RS13170 IPR000531 TonB-dependent receptor, beta-barrel JE55_RS13170 IPR012910 TonB-dependent receptor, plug JE55_RS13175 IPR000522 ABC transporter, permease protein JE55_RS13175 IPR029022 ABC transporter, BtuC-like JE55_RS13180 IPR003439 ABC transporter-like JE55_RS13180 IPR003593 AAA+ ATPase domain JE55_RS13180 IPR017871 ABC transporter, conserved site JE55_RS13180 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13185 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like JE55_RS13185 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic JE55_RS13185 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal JE55_RS13190 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase JE55_RS13195 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS13195 IPR017578 Alpha-ribazole phosphatase, CobC JE55_RS13195 IPR029033 Histidine phosphatase superfamily JE55_RS13205 IPR002491 ABC transporter periplasmic binding domain JE55_RS13210 IPR004839 Aminotransferase, class I/classII JE55_RS13210 IPR005860 L-threonine-O-3-phosphate decarboxylase JE55_RS13210 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS13210 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS13215 IPR004485 Cobalamin biosynthesis CobD/CbiB JE55_RS13220 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase JE55_RS13220 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13225 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS13225 IPR004459 Cobyric acid synthase CobQ JE55_RS13225 IPR011698 CobB/CobQ-like glutamine amidotransferase JE55_RS13225 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13225 IPR029062 Class I glutamine amidotransferase-like JE55_RS13230 IPR032808 JE55_RS13230 JE55_RS13235 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS13235 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13240 IPR003190 Aspartate decarboxylase JE55_RS13240 IPR009010 Aspartate decarboxylase-like domain JE55_RS13245 IPR003721 Pantoate-beta-alanine ligase JE55_RS13245 IPR004821 Cytidyltransferase-like domain JE55_RS13245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13250 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA JE55_RS13255 IPR021853 Protein of unknown function DUF3460 JE55_RS13260 IPR000184 Bacterial surface antigen (D15) JE55_RS13265 IPR007452 Protein of unknown function DUF490 JE55_RS13275 IPR001077 O-methyltransferase, family 2 JE55_RS13275 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS13280 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JE55_RS13280 IPR002547 tRNA-binding domain JE55_RS13280 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal JE55_RS13280 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JE55_RS13280 IPR012340 Nucleic acid-binding, OB-fold JE55_RS13280 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13280 IPR014758 Methionyl-tRNA synthetase JE55_RS13280 IPR015413 Methionyl/Leucyl tRNA synthetase JE55_RS13280 IPR023458 Methionine-tRNA ligase, type 1 JE55_RS13280 IPR029038 Methionyl-tRNA synthetase, Zn-domain JE55_RS13285 IPR006664 Outer membrane protein, bacterial JE55_RS13285 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JE55_RS13285 IPR027367 YMGG-like Gly-zipper JE55_RS13290 IPR000808 Mrp, conserved site JE55_RS13290 IPR002744 Domain of unknown function DUF59 JE55_RS13290 IPR019591 Mrp/NBP35 ATP-binding protein JE55_RS13290 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13295 IPR001424 Superoxide dismutase, copper/zinc binding domain JE55_RS13295 IPR024134 JE55_RS13295 JE55_RS13300 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase JE55_RS13300 IPR011962 Deoxycytidine triphosphate deaminase JE55_RS13300 IPR029054 dUTPase-like JE55_RS13305 IPR000310 Orn/Lys/Arg decarboxylase, major domain JE55_RS13305 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal JE55_RS13305 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal JE55_RS13305 IPR011193 Ornithine/lysine/arginine decarboxylase JE55_RS13305 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS13305 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS13305 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS13310 IPR009739 Protein of unknown function DUF1311 JE55_RS13315 IPR006439 HAD hydrolase, subfamily IA JE55_RS13315 IPR023214 HAD-like domain JE55_RS13320 IPR000362 Fumarate lyase family JE55_RS13320 IPR008948 L-Aspartase-like JE55_RS13320 IPR009049 Argininosuccinate lyase JE55_RS13320 IPR020557 Fumarate lyase, conserved site JE55_RS13320 IPR022761 Fumarate lyase, N-terminal JE55_RS13320 IPR024083 Fumarase/histidase, N-terminal JE55_RS13320 IPR029419 Argininosuccinate lyase, C-terminal JE55_RS13325 IPR000015 Outer membrane usher protein JE55_RS13325 IPR025949 PapC-like, C-terminal domain JE55_RS13330 IPR008962 PapD-like JE55_RS13330 IPR016147 PapD, N-terminal, bacterial JE55_RS13335 IPR007893 Spore coat protein U JE55_RS13340 IPR007893 Spore coat protein U JE55_RS13345 IPR001387 Cro/C1-type helix-turn-helix domain JE55_RS13345 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS13350 IPR013216 Methyltransferase type 11 JE55_RS13350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS13355 IPR008490 Transposase InsH, N-terminal JE55_RS13355 IPR025668 Transposase DDE domain JE55_RS13360 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JE55_RS13360 IPR018129 Phosphoenolpyruvate carboxylase, active site JE55_RS13360 IPR021135 Phosphoenolpyruvate carboxylase JE55_RS13360 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type JE55_RS13360 IPR033129 JE55_RS13360 JE55_RS13370 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase JE55_RS13370 IPR022417 Porphobilinogen deaminase, N-terminal JE55_RS13370 IPR022418 Porphobilinogen deaminase, C-terminal JE55_RS13370 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site JE55_RS13375 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase JE55_RS13375 IPR007470 HemX JE55_RS13380 IPR005254 Heme biosynthesis-associated TPR protein JE55_RS13380 IPR010817 HemY, N-terminal JE55_RS13380 IPR011990 Tetratricopeptide-like helical domain JE55_RS13380 IPR019734 Tetratricopeptide repeat JE55_RS13385 IPR011701 Major facilitator superfamily JE55_RS13385 IPR020846 Major facilitator superfamily domain JE55_RS13390 IPR002347 Glucose/ribitol dehydrogenase JE55_RS13390 IPR016040 NAD(P)-binding domain JE55_RS13395 IPR015590 Aldehyde dehydrogenase domain JE55_RS13395 IPR016160 Aldehyde dehydrogenase, cysteine active site JE55_RS13395 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS13395 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS13395 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS13395 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JE55_RS13400 IPR008162 Inorganic pyrophosphatase JE55_RS13405 IPR000305 GIY-YIG nuclease superfamily JE55_RS13410 IPR002772 Glycoside hydrolase family 3 C-terminal domain JE55_RS13410 IPR026892 Glycoside hydrolase family 3 JE55_RS13415 IPR007434 Protein of unknown function DUF482 JE55_RS13415 IPR016181 Acyl-CoA N-acyltransferase JE55_RS13420 IPR003010 Carbon-nitrogen hydrolase JE55_RS13420 IPR003694 NAD(+) synthetase JE55_RS13420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13420 IPR022310 NAD/GMP synthase JE55_RS13425 IPR002187 Nitrogen regulatory protein PII JE55_RS13425 IPR002332 Nitrogen regulatory protein P-II, urydylation site JE55_RS13425 IPR011322 Nitrogen regulatory PII-like, alpha/beta JE55_RS13425 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JE55_RS13425 IPR017918 Nitrogen regulatory protein PII, conserved site JE55_RS13430 IPR002299 Porin, Neisseria sp. type JE55_RS13430 IPR023614 Porin domain JE55_RS13435 IPR003439 ABC transporter-like JE55_RS13435 IPR003593 AAA+ ATPase domain JE55_RS13435 IPR017871 ABC transporter, conserved site JE55_RS13435 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13435 IPR030679 JE55_RS13435 JE55_RS13440 IPR000515 MetI-like domain JE55_RS13440 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family JE55_RS13445 IPR000515 MetI-like domain JE55_RS13445 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family JE55_RS13445 IPR030199 JE55_RS13445 JE55_RS13450 IPR001638 Extracellular solute-binding protein, family 3 JE55_RS13450 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein JE55_RS13450 IPR018313 Extracellular solute-binding protein, family 3, conserved site JE55_RS13460 IPR003829 Pirin, N-terminal domain JE55_RS13460 IPR011051 RmlC-like cupin domain JE55_RS13460 IPR012093 Pirin JE55_RS13460 IPR014710 RmlC-like jelly roll fold JE55_RS13465 IPR025961 Heavy-metal resistance protein JE55_RS13470 IPR001789 Signal transduction response regulator, receiver domain JE55_RS13470 IPR001867 Signal transduction response regulator, C-terminal JE55_RS13470 IPR011006 CheY-like superfamily JE55_RS13470 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13470 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS13475 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13475 IPR003660 HAMP linker domain JE55_RS13475 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS13475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS13485 IPR000515 MetI-like domain JE55_RS13490 IPR003439 ABC transporter-like JE55_RS13490 IPR003593 AAA+ ATPase domain JE55_RS13490 IPR017871 ABC transporter, conserved site JE55_RS13490 IPR018632 C-terminal AAA-associated domain JE55_RS13490 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13510 IPR001830 Glycosyl transferase, family 20 JE55_RS13510 IPR012766 Alpha,alpha-trehalose-phosphate synthase JE55_RS13515 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13525 IPR011701 Major facilitator superfamily JE55_RS13525 IPR020846 Major facilitator superfamily domain JE55_RS13530 IPR005247 YbhB/YbcL JE55_RS13530 IPR008914 Phosphatidylethanolamine-binding protein PEBP JE55_RS13550 IPR005658 Proteinase inhibitor I11, ecotin JE55_RS13550 IPR023189 Proteinase inhibitor I11, ecotin domain JE55_RS13550 IPR027438 Ecotin, C-terminal JE55_RS13555 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal JE55_RS13555 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS13555 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A JE55_RS13565 IPR014453 Inhibitor of vertebrate lysozyme JE55_RS13570 IPR008619 Filamentous haemagglutinin repeat JE55_RS13570 IPR008638 Filamentous haemagglutinin, N-terminal JE55_RS13570 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 IPR011050 Pectin lyase fold/virulence factor JE55_RS13570 IPR012334 Pectin lyase fold JE55_RS13570 IPR024973 ESPR domain JE55_RS13570 IPR025157 Haemagluttinin repeat JE55_RS13575 IPR005565 Haemolysin activator HlyB JE55_RS13575 IPR013686 Polypeptide-transport-associated, ShlB-type JE55_RS13575 IPR027282 Two partner secretion pathway transporter JE55_RS13620 IPR004368 Translation initiation factor IF-1 JE55_RS13620 IPR006196 RNA-binding domain, S1, IF1 type JE55_RS13620 IPR012340 Nucleic acid-binding, OB-fold JE55_RS13620 IPR022967 RNA-binding domain, S1 JE55_RS13630 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS13630 IPR000639 Epoxide hydrolase-like JE55_RS13630 IPR029058 Alpha/Beta hydrolase fold JE55_RS13635 IPR018750 Protein of unknown function DUF2306, membrane JE55_RS13640 IPR004039 Rubredoxin-type fold JE55_RS13640 IPR018527 Rubredoxin, iron-binding site JE55_RS13640 IPR024935 Rubredoxin domain JE55_RS13645 IPR025512 Domain of unknown function DUF4399 JE55_RS13650 IPR003439 ABC transporter-like JE55_RS13650 IPR003593 AAA+ ATPase domain JE55_RS13650 IPR017871 ABC transporter, conserved site JE55_RS13650 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13650 IPR032524 JE55_RS13650 JE55_RS13650 IPR032781 JE55_RS13650 JE55_RS13655 IPR001241 DNA topoisomerase, type IIA JE55_RS13655 IPR002288 DNA gyrase B subunit, C-terminal JE55_RS13655 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13655 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative JE55_RS13655 IPR006171 Toprim domain JE55_RS13655 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 JE55_RS13655 IPR013759 DNA topoisomerase, type IIA, central domain JE55_RS13655 IPR013760 DNA topoisomerase, type IIA-like domain JE55_RS13655 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS13655 IPR018522 DNA topoisomerase, type IIA, conserved site JE55_RS13655 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS13660 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal JE55_RS13660 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative JE55_RS13660 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta JE55_RS13660 IPR013760 DNA topoisomerase, type IIA-like domain JE55_RS13660 IPR024946 Arginine repressor C-terminal-like domain JE55_RS13670 IPR008457 Copper resistance D JE55_RS13675 IPR000847 Transcription regulator HTH, LysR JE55_RS13675 IPR005119 LysR, substrate-binding JE55_RS13675 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13680 IPR007896 Transmembrane pair, bacterial JE55_RS13685 IPR000847 Transcription regulator HTH, LysR JE55_RS13685 IPR005119 LysR, substrate-binding JE55_RS13685 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13690 IPR005828 General substrate transporter JE55_RS13690 IPR020846 Major facilitator superfamily domain JE55_RS13695 IPR002933 Peptidase M20 JE55_RS13695 IPR010158 Amidase, hydantoinase/carbamoylase JE55_RS13695 IPR011650 Peptidase M20, dimerisation domain JE55_RS13700 IPR000286 Histone deacetylase superfamily JE55_RS13700 IPR023801 Histone deacetylase domain JE55_RS13710 IPR003370 Chromate transporter JE55_RS13710 IPR014047 Chromate transporter, long chain JE55_RS13715 IPR000160 GGDEF domain JE55_RS13715 IPR001633 EAL domain JE55_RS13715 IPR029787 Nucleotide cyclase JE55_RS13715 IPR033479 JE55_RS13715 JE55_RS13720 IPR003719 Phenazine biosynthesis PhzF protein JE55_RS13725 IPR006175 YjgF/Yer057p/UK114 family JE55_RS13725 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS13730 IPR004839 Aminotransferase, class I/classII JE55_RS13730 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS13730 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS13730 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS13735 IPR000620 Drug/metabolite transporter JE55_RS13740 IPR025870 Glyoxalase-like domain JE55_RS13745 IPR000524 Transcription regulator HTH, GntR JE55_RS13745 IPR004839 Aminotransferase, class I/classII JE55_RS13745 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13745 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS13745 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS13750 IPR001404 Heat shock protein Hsp90 family JE55_RS13750 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13750 IPR019805 Heat shock protein Hsp90, conserved site JE55_RS13750 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS13750 IPR020575 Heat shock protein Hsp90, N-terminal JE55_RS13755 IPR007440 Chorismate--pyruvate lyase JE55_RS13755 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS13760 IPR005122 Uracil-DNA glycosylase-like JE55_RS13760 IPR026353 Hypoxanthine-DNA glycosylase JE55_RS13765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS13770 IPR021741 Protein of unknown function DUF3311 JE55_RS13775 IPR001734 Sodium/solute symporter JE55_RS13780 IPR028973 3-demethylubiquinone-9 3-methyltransferase JE55_RS13780 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS13785 IPR001585 Transaldolase JE55_RS13785 IPR004730 Transaldolase type 1 JE55_RS13785 IPR013785 Aldolase-type TIM barrel JE55_RS13785 IPR018225 Transaldolase, active site JE55_RS13790 IPR004711 Benzoate transporter JE55_RS13795 IPR008912 Uncharacterised protein family CoxE-like JE55_RS13800 IPR003593 AAA+ ATPase domain JE55_RS13800 IPR003959 ATPase, AAA-type, core JE55_RS13800 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13805 IPR009056 Cytochrome c-like domain JE55_RS13810 IPR009056 Cytochrome c-like domain JE55_RS13815 IPR014993 Protein of unknown function DUF1841 JE55_RS13820 IPR000620 Drug/metabolite transporter JE55_RS13825 IPR000445 Helix-hairpin-helix motif JE55_RS13825 IPR003265 HhH-GPD domain JE55_RS13825 IPR004036 Endonuclease III-like, conserved site-2 JE55_RS13825 IPR005759 Endonuclease III JE55_RS13825 IPR011257 DNA glycosylase JE55_RS13825 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JE55_RS13830 IPR007202 4Fe-4S domain JE55_RS13830 IPR010207 Electron transport complex, RnfB JE55_RS13830 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS13835 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS13835 IPR009057 Homeodomain-like JE55_RS13835 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS13835 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS13840 IPR009656 PHB de-polymerase, C-terminal JE55_RS13840 IPR010915 Polyhydroxyalkanoate depolymerase JE55_RS13840 IPR029058 Alpha/Beta hydrolase fold JE55_RS13845 IPR008928 Six-hairpin glycosidase-like JE55_RS13845 IPR011613 Glycoside hydrolase family 15 JE55_RS13845 IPR012341 Six-hairpin glycosidase JE55_RS13850 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain JE55_RS13850 IPR015943 WD40/YVTN repeat-like-containing domain JE55_RS13850 IPR019405 Lactonase, 7-bladed beta propeller JE55_RS13855 IPR002543 FtsK domain JE55_RS13855 IPR003593 AAA+ ATPase domain JE55_RS13855 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13855 IPR018541 FtsK gamma domain JE55_RS13855 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13860 IPR005184 Domain of unknown function DUF306, Meta/HslJ JE55_RS13870 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain JE55_RS13870 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type JE55_RS13870 IPR005862 Phosphoribosylglycinamide formyltransferase 2 JE55_RS13870 IPR011054 Rudiment single hybrid motif JE55_RS13870 IPR013815 ATP-grasp fold, subdomain 1 JE55_RS13870 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS13870 IPR016185 Pre-ATP-grasp domain JE55_RS13880 IPR018660 C-type lysozyme, inhibitor JE55_RS13885 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site JE55_RS13885 IPR001650 Helicase, C-terminal JE55_RS13885 IPR011545 DEAD/DEAH box helicase domain JE55_RS13885 IPR014001 Helicase, superfamily 1/2, ATP-binding domain JE55_RS13885 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13890 IPR000924 Glutamyl/glutaminyl-tRNA synthetase JE55_RS13890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13890 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain JE55_RS13890 IPR022380 Glutamyl-Q tRNA(Asp) synthetase JE55_RS13895 IPR001763 Rhodanese-like domain JE55_RS13895 IPR020936 Uncharacterised protein family UPF0176 JE55_RS13905 IPR003141 Polymerase/histidinol phosphatase, N-terminal JE55_RS13905 IPR004013 PHP, C-terminal JE55_RS13905 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JE55_RS13905 IPR004805 DNA polymerase III, alpha subunit JE55_RS13905 IPR011708 Bacterial DNA polymerase III, alpha subunit JE55_RS13905 IPR012340 Nucleic acid-binding, OB-fold JE55_RS13905 IPR016195 Polymerase/histidinol phosphatase-like JE55_RS13905 IPR029460 DNA polymerase, helix-hairpin-helix motif JE55_RS13910 IPR003439 ABC transporter-like JE55_RS13910 IPR003593 AAA+ ATPase domain JE55_RS13910 IPR011527 ABC transporter type 1, transmembrane domain JE55_RS13910 IPR011917 ABC transporter, lipid A export, MsbA JE55_RS13910 IPR017871 ABC transporter, conserved site JE55_RS13910 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13915 IPR001296 Glycosyl transferase, family 1 JE55_RS13915 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain JE55_RS13920 IPR002201 Glycosyl transferase, family 9 JE55_RS13925 IPR007016 O-antigen ligase-related JE55_RS13930 IPR001296 Glycosyl transferase, family 1 JE55_RS13935 IPR002201 Glycosyl transferase, family 9 JE55_RS13940 IPR001173 Glycosyltransferase 2-like JE55_RS13940 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS13945 IPR024572 Protein of unknown function DUF3315 JE55_RS13955 IPR011701 Major facilitator superfamily JE55_RS13955 IPR020846 Major facilitator superfamily domain JE55_RS13960 IPR011033 PRC-barrel-like JE55_RS13965 IPR003779 Carboxymuconolactone decarboxylase-like JE55_RS13965 IPR004675 Alkylhydroperoxidase AhpD core JE55_RS13965 IPR029032 AhpD-like JE55_RS13970 IPR007627 RNA polymerase sigma-70 region 2 JE55_RS13970 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13970 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JE55_RS13970 IPR013324 RNA polymerase sigma factor, region 3/4 JE55_RS13970 IPR013325 RNA polymerase sigma factor, region 2 JE55_RS13970 IPR014284 RNA polymerase sigma-70 like domain JE55_RS13970 IPR014303 RNA polymerase sigma-70, ECF type JE55_RS13970 IPR032710 JE55_RS13970 JE55_RS14000 IPR017769 Phospholipase C accessory protein PlcR JE55_RS14005 IPR004963 Protein notum homologue JE55_RS14005 IPR029058 Alpha/Beta hydrolase fold JE55_RS14010 IPR006042 Xanthine/uracil permease JE55_RS14010 IPR006043 Xanthine/uracil/vitamin C permease JE55_RS14010 IPR017588 Xanthine permease JE55_RS14020 IPR021146 Phage gp6-like head-tail connector protein JE55_RS14025 IPR006427 Phage portal protein, HK97 JE55_RS14025 IPR006944 Bacteriophage/Gene transfer agent portal protein JE55_RS14035 IPR006433 Prohead protease, HK97 family JE55_RS14035 IPR006444 Phage major capsid protein, HK97 JE55_RS14035 IPR024455 Phage capsid JE55_RS14040 IPR005021 Phage terminase JE55_RS14050 IPR002711 HNH endonuclease JE55_RS14050 IPR003615 HNH nuclease JE55_RS14065 IPR003173 Transcriptional coactivator p15 (PC4) JE55_RS14065 IPR009044 ssDNA-binding transcriptional regulator JE55_RS14110 IPR002104 Integrase, catalytic JE55_RS14110 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS14110 IPR013762 Integrase-like, catalytic core JE55_RS14110 IPR023109 Integrase/recombinase, N-terminal JE55_RS14110 IPR025166 Domain of unknown function DUF4102 JE55_RS14115 IPR004659 Ribonuclease E/G JE55_RS14115 IPR012340 Nucleic acid-binding, OB-fold JE55_RS14115 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G JE55_RS14115 IPR022967 RNA-binding domain, S1 JE55_RS14120 IPR003697 Maf-like protein JE55_RS14120 IPR029001 Inosine triphosphate pyrophosphatase-like JE55_RS14125 IPR003742 SPOUT methyltransferase, predicted JE55_RS14125 IPR016051 Ribosomal RNA large subunit methyltransferase H JE55_RS14125 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS14125 IPR029028 Alpha/beta knot methyltransferases JE55_RS14130 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JE55_RS14135 IPR004821 Cytidyltransferase-like domain JE55_RS14135 IPR005248 Probable nicotinate-nucleotide adenylyltransferase JE55_RS14135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS14140 IPR001260 Coproporphyrinogen III oxidase, aerobic JE55_RS14140 IPR018375 Coproporphyrinogen III oxidase, conserved site JE55_RS14145 IPR000115 Phosphoribosylglycinamide synthetase JE55_RS14145 IPR011054 Rudiment single hybrid motif JE55_RS14145 IPR013815 ATP-grasp fold, subdomain 1 JE55_RS14145 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS14145 IPR016185 Pre-ATP-grasp domain JE55_RS14145 IPR020560 Phosphoribosylglycinamide synthetase, C-domain JE55_RS14145 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JE55_RS14145 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal JE55_RS14150 IPR002876 Transcriptional regulator TACO1-like JE55_RS14150 IPR017856 Integrase, N-terminal zinc-binding domain-like JE55_RS14150 IPR026563 Transcriptional regulator TACO1-like, domain 2 JE55_RS14150 IPR026564 Transcriptional regulator TACO1-like, domain 3 JE55_RS14150 IPR029072 YebC-like JE55_RS14155 IPR005765 Uracil phosphoribosyl transferase JE55_RS14155 IPR029057 Phosphoribosyltransferase-like JE55_RS14160 IPR002347 Glucose/ribitol dehydrogenase JE55_RS14160 IPR016040 NAD(P)-binding domain JE55_RS14165 IPR004363 Methylglyoxal synthase JE55_RS14165 IPR011607 Methylglyoxal synthase-like domain JE55_RS14165 IPR018148 Methylglyoxal synthase, active site JE55_RS14170 IPR002085 Alcohol dehydrogenase superfamily, zinc-type JE55_RS14170 IPR011032 GroES (chaperonin 10)-like JE55_RS14170 IPR013149 Alcohol dehydrogenase, C-terminal JE55_RS14170 IPR013154 Alcohol dehydrogenase GroES-like JE55_RS14170 IPR016040 NAD(P)-binding domain JE55_RS14170 IPR020843 Polyketide synthase, enoylreductase JE55_RS14175 IPR011726 K+ transporting P-type ATPase, F subunit JE55_RS14180 IPR004623 Potassium-transporting ATPase A chain JE55_RS14185 IPR001757 Cation-transporting P-type ATPase JE55_RS14185 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA JE55_RS14185 IPR008250 P-type ATPase, A domain JE55_RS14185 IPR018303 P-type ATPase, phosphorylation site JE55_RS14185 IPR023214 HAD-like domain JE55_RS14185 IPR023299 P-type ATPase, cytoplasmic domain N JE55_RS14190 IPR003820 Potassium-transporting ATPase C chain JE55_RS14200 IPR003018 GAF domain JE55_RS14200 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS14200 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS14200 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal JE55_RS14200 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS14200 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS14200 IPR025201 Sensor protein KdpD, transmembrane domain JE55_RS14200 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14200 IPR029016 GAF domain-like JE55_RS14205 IPR001789 Signal transduction response regulator, receiver domain JE55_RS14205 IPR001867 Signal transduction response regulator, C-terminal JE55_RS14205 IPR011006 CheY-like superfamily JE55_RS14205 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14205 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS14210 IPR005590 Protein of unknown function DUF333 JE55_RS14215 IPR000390 Small multidrug resistance protein family JE55_RS14220 IPR025196 Domain of unknown function DUF4126 JE55_RS14225 IPR003838 Permease FtsX-like JE55_RS14230 IPR001486 Globin, truncated bacterial-like JE55_RS14230 IPR009050 Globin-like JE55_RS14230 IPR012292 Globin, structural domain JE55_RS14230 IPR019795 Globin, bacterial-like, conserved site JE55_RS14235 IPR009000 Translation protein, beta-barrel domain JE55_RS14235 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JE55_RS14235 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain JE55_RS14235 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal JE55_RS14240 IPR010323 Protein of unknown function DUF924 JE55_RS14240 IPR011990 Tetratricopeptide-like helical domain JE55_RS14245 IPR000120 Amidase JE55_RS14245 IPR023631 Amidase signature domain JE55_RS14250 IPR005829 Sugar transporter, conserved site JE55_RS14250 IPR011701 Major facilitator superfamily JE55_RS14250 IPR020846 Major facilitator superfamily domain JE55_RS14260 IPR002347 Glucose/ribitol dehydrogenase JE55_RS14260 IPR016040 NAD(P)-binding domain JE55_RS14260 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS14265 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG JE55_RS14265 IPR031100 JE55_RS14265 JE55_RS14270 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS14270 IPR009057 Homeodomain-like JE55_RS14270 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS14270 IPR025722 Bacterial transcriptional repressor TetR JE55_RS14275 IPR000829 Diacylglycerol kinase, prokaryotic JE55_RS14280 IPR001296 Glycosyl transferase, family 1 JE55_RS14280 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain JE55_RS14285 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type JE55_RS14285 IPR029052 Metallo-dependent phosphatase-like JE55_RS14290 IPR010432 RDD JE55_RS14295 IPR021455 Protein of unknown function DUF3106 JE55_RS14300 IPR022064 Protein of unknown function DUF3619 JE55_RS14305 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14305 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JE55_RS14305 IPR013324 RNA polymerase sigma factor, region 3/4 JE55_RS14305 IPR013325 RNA polymerase sigma factor, region 2 JE55_RS14305 IPR014284 RNA polymerase sigma-70 like domain JE55_RS14310 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JE55_RS14310 IPR012000 Thiamine pyrophosphate enzyme, central domain JE55_RS14310 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JE55_RS14310 IPR012846 Acetolactate synthase, large subunit, biosynthetic JE55_RS14310 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS14310 IPR029061 Thiamin diphosphate-binding fold JE55_RS14315 IPR004789 Acetolactate synthase, small subunit JE55_RS14315 IPR019455 Acetolactate synthase, small subunit, C-terminal JE55_RS14320 IPR000506 Acetohydroxy acid isomeroreductase C-terminal JE55_RS14320 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS14320 IPR013023 Acetohydroxy acid isomeroreductase JE55_RS14320 IPR013116 Acetohydroxy acid isomeroreductase, catalytic JE55_RS14320 IPR013328 Dehydrogenase, multihelical JE55_RS14320 IPR016040 NAD(P)-binding domain JE55_RS14320 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS14325 IPR003817 Phosphatidylserine decarboxylase-related JE55_RS14325 IPR033175 JE55_RS14325 JE55_RS14330 IPR000462 CDP-alcohol phosphatidyltransferase JE55_RS14330 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase JE55_RS14335 IPR000891 Pyruvate carboxyltransferase JE55_RS14335 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site JE55_RS14335 IPR005671 2-isopropylmalate synthase, bacterial-type JE55_RS14335 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain JE55_RS14335 IPR013785 Aldolase-type TIM barrel JE55_RS14340 IPR001902 Sulphate anion transporter JE55_RS14340 IPR011547 Sulphate transporter JE55_RS14345 IPR001765 Carbonic anhydrase JE55_RS14345 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site JE55_RS14360 IPR028081 Leucine-binding protein domain JE55_RS14360 IPR028082 Periplasmic binding protein-like I JE55_RS14365 IPR000589 Ribosomal protein S15 JE55_RS14365 IPR005290 Ribosomal protein S15, bacterial-type JE55_RS14365 IPR009068 S15/NS1, RNA-binding JE55_RS14370 IPR001247 Exoribonuclease, phosphorolytic domain 1 JE55_RS14370 IPR003029 Ribosomal protein S1, RNA-binding domain JE55_RS14370 IPR004087 K Homology domain JE55_RS14370 IPR004088 K Homology domain, type 1 JE55_RS14370 IPR012162 Polyribonucleotide nucleotidyltransferase JE55_RS14370 IPR012340 Nucleic acid-binding, OB-fold JE55_RS14370 IPR015847 Exoribonuclease, phosphorolytic domain 2 JE55_RS14370 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain JE55_RS14370 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS14370 IPR022967 RNA-binding domain, S1 JE55_RS14370 IPR027408 PNPase/RNase PH domain JE55_RS14375 IPR002085 Alcohol dehydrogenase superfamily, zinc-type JE55_RS14375 IPR011032 GroES (chaperonin 10)-like JE55_RS14375 IPR013149 Alcohol dehydrogenase, C-terminal JE55_RS14375 IPR014189 Quinone oxidoreductase PIG3 JE55_RS14375 IPR016040 NAD(P)-binding domain JE55_RS14375 IPR020843 Polyketide synthase, enoylreductase JE55_RS14380 IPR000652 Triosephosphate isomerase JE55_RS14380 IPR013785 Aldolase-type TIM barrel JE55_RS14380 IPR020861 Triosephosphate isomerase, active site JE55_RS14380 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic JE55_RS14385 IPR004692 Preprotein translocase SecG subunit JE55_RS14395 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 JE55_RS14395 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid JE55_RS14400 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit JE55_RS14400 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit JE55_RS14405 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit JE55_RS14405 IPR010218 NADH dehydrogenase, subunit C JE55_RS14405 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site JE55_RS14410 IPR001135 NADH-quinone oxidoreductase, subunit D JE55_RS14410 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site JE55_RS14410 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H JE55_RS14410 IPR029014 NiFe hydrogenase-like JE55_RS14415 IPR002023 NADH-quinone oxidoreductase subunit E-like JE55_RS14415 IPR012336 Thioredoxin-like fold JE55_RS14420 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site JE55_RS14420 IPR011537 NADH ubiquinone oxidoreductase, F subunit JE55_RS14420 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit JE55_RS14420 IPR019554 Soluble ligand binding domain JE55_RS14420 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding JE55_RS14425 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site JE55_RS14425 IPR001041 2Fe-2S ferredoxin-type domain JE55_RS14425 IPR006656 Molybdopterin oxidoreductase JE55_RS14425 IPR010228 NADH:ubiquinone oxidoreductase, subunit G JE55_RS14425 IPR012675 Beta-grasp domain JE55_RS14425 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding JE55_RS14430 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H JE55_RS14430 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site JE55_RS14435 IPR010226 NADH-quinone oxidoreductase, chain I JE55_RS14435 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS14435 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS14440 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 JE55_RS14445 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K JE55_RS14450 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal JE55_RS14450 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase JE55_RS14450 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal JE55_RS14450 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 JE55_RS14450 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup JE55_RS14455 IPR000260 NADH:ubiquinone oxidoreductase, chain 4, N-terminal JE55_RS14455 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase JE55_RS14455 IPR003918 NADH:ubiquinone oxidoreductase JE55_RS14455 IPR010227 NADH-quinone oxidoreductase, chain M/4 JE55_RS14460 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase JE55_RS14460 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 JE55_RS14465 IPR016768 Uncharacterised conserved protein UCP019883, membrane JE55_RS14470 IPR000086 NUDIX hydrolase domain JE55_RS14470 IPR015797 NUDIX hydrolase domain-like JE55_RS14470 IPR020084 NUDIX hydrolase, conserved site JE55_RS14475 IPR009562 Protein of unknown function DUF1178 JE55_RS14480 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS14480 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS14480 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS14480 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JE55_RS14485 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS14485 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS14485 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JE55_RS14490 IPR002539 MaoC-like domain JE55_RS14490 IPR029069 HotDog domain JE55_RS14495 IPR002539 MaoC-like domain JE55_RS14495 IPR029069 HotDog domain JE55_RS14500 IPR006626 Parallel beta-helix repeat JE55_RS14500 IPR011050 Pectin lyase fold/virulence factor JE55_RS14500 IPR012334 Pectin lyase fold JE55_RS14510 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS14510 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS14510 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS14510 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JE55_RS14515 IPR002575 Aminoglycoside phosphotransferase JE55_RS14515 IPR011009 Protein kinase-like domain JE55_RS14520 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS14520 IPR029033 Histidine phosphatase superfamily JE55_RS14525 IPR001753 Crotonase superfamily JE55_RS14525 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site JE55_RS14525 IPR029045 ClpP/crotonase-like domain JE55_RS14530 IPR004045 Glutathione S-transferase, N-terminal JE55_RS14530 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS14530 IPR012336 Thioredoxin-like fold JE55_RS14535 IPR004839 Aminotransferase, class I/classII JE55_RS14535 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS14535 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS14535 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS14540 IPR002716 PIN domain JE55_RS14540 IPR029060 PIN domain-like JE55_RS14545 IPR005583 Uncharacterised protein family UPF0246 JE55_RS14550 IPR000834 Peptidase M14, carboxypeptidase A JE55_RS14560 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family JE55_RS14565 IPR000792 Transcription regulator LuxR, C-terminal JE55_RS14565 IPR010518 Flagellar regulatory FleQ JE55_RS14565 IPR011006 CheY-like superfamily JE55_RS14565 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14565 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS14570 IPR021292 Protein of unknown function DUF2863 JE55_RS14600 IPR000587 Creatinase, N-terminal JE55_RS14600 IPR000994 Peptidase M24, structural domain JE55_RS14600 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site JE55_RS14600 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JE55_RS14600 IPR032416 JE55_RS14600 JE55_RS14605 IPR005804 Fatty acid desaturase, type 1 JE55_RS14610 IPR009057 Homeodomain-like JE55_RS14610 IPR018060 DNA binding HTH domain, AraC-type JE55_RS14610 IPR018062 HTH domain AraC-type, conserved site JE55_RS14610 IPR020449 Transcription regulator HTH, AraC- type JE55_RS14610 IPR032687 JE55_RS14610 JE55_RS14615 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JE55_RS14615 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JE55_RS14615 IPR016040 NAD(P)-binding domain JE55_RS14615 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 JE55_RS14615 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JE55_RS14615 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JE55_RS14620 IPR025161 Putative transposase IS4/IS5 family JE55_RS14625 IPR001638 Extracellular solute-binding protein, family 3 JE55_RS14625 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates JE55_RS14625 IPR015168 SsuA/THI5-like JE55_RS14630 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS14630 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain JE55_RS14630 IPR033424 JE55_RS14630 JE55_RS14635 IPR001478 PDZ domain JE55_RS14635 IPR001969 Aspartic peptidase, active site JE55_RS14635 IPR021109 Aspartic peptidase domain JE55_RS14645 IPR009056 Cytochrome c-like domain JE55_RS14645 IPR024167 Cytochrome c4 JE55_RS14650 IPR009056 Cytochrome c-like domain JE55_RS14650 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit JE55_RS14660 IPR001505 Copper centre Cu(A) JE55_RS14660 IPR002429 Cytochrome c oxidase subunit II C-terminal JE55_RS14660 IPR008972 Cupredoxin JE55_RS14665 IPR000883 Cytochrome c oxidase subunit I JE55_RS14665 IPR023616 Cytochrome c oxidase, subunit I domain JE55_RS14670 IPR009056 Cytochrome c-like domain JE55_RS14675 IPR013976 Metal-dependent hydrolase HDOD JE55_RS14680 IPR000014 PAS domain JE55_RS14680 IPR000160 GGDEF domain JE55_RS14680 IPR001633 EAL domain JE55_RS14680 IPR013656 PAS fold-4 JE55_RS14680 IPR029787 Nucleotide cyclase JE55_RS14685 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JE55_RS14685 IPR012336 Thioredoxin-like fold JE55_RS14685 IPR024706 Peroxiredoxin, AhpC-type JE55_RS14690 IPR016040 NAD(P)-binding domain JE55_RS14700 IPR001036 Acriflavin resistance protein JE55_RS14700 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS14705 IPR001036 Acriflavin resistance protein JE55_RS14705 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS14710 IPR006143 RND efflux pump, membrane fusion protein JE55_RS14710 IPR022824 Multidrug resistance protein MdtA JE55_RS14710 IPR032317 JE55_RS14710 JE55_RS14715 IPR005471 Transcription regulator IclR, N-terminal JE55_RS14715 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14715 IPR014757 Transcription regulator IclR, C-terminal JE55_RS14715 IPR029016 GAF domain-like JE55_RS14720 IPR008557 Protein of unknown function DUF839 JE55_RS14730 IPR000944 Transcription regulator Rrf2-like JE55_RS14730 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14735 IPR016040 NAD(P)-binding domain JE55_RS14740 IPR010300 Cysteine dioxygenase type I JE55_RS14740 IPR011051 RmlC-like cupin domain JE55_RS14740 IPR014710 RmlC-like jelly roll fold JE55_RS14745 IPR000485 AsnC-type HTH domain JE55_RS14745 IPR011008 Dimeric alpha-beta barrel JE55_RS14745 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14745 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JE55_RS14745 IPR019887 Transcription regulator AsnC-type, C-terminal JE55_RS14745 IPR019888 Transcription regulator AsnC-type JE55_RS14750 IPR003439 ABC transporter-like JE55_RS14750 IPR003593 AAA+ ATPase domain JE55_RS14750 IPR017871 ABC transporter, conserved site JE55_RS14750 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14755 IPR000515 MetI-like domain JE55_RS14760 IPR026045 Ferric binding protein JE55_RS14770 IPR002293 Amino acid/polyamine transporter I JE55_RS14770 IPR004840 Amino acid permease, conserved site JE55_RS14770 IPR004841 Amino acid permease/ SLC12A domain JE55_RS14775 IPR032692 JE55_RS14775 JE55_RS14785 IPR006697 Exodeoxyribonuclease V, gamma subunit JE55_RS14785 IPR011335 Restriction endonuclease type II-like JE55_RS14785 IPR013986 DExx box DNA helicase domain JE55_RS14785 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14790 IPR000212 DNA helicase, UvrD/REP type JE55_RS14790 IPR004586 Exodeoxyribonuclease V, beta subunit JE55_RS14790 IPR011335 Restriction endonuclease type II-like JE55_RS14790 IPR011604 Exonuclease, phage-type/RecB, C-terminal JE55_RS14790 IPR014016 UvrD-like Helicase, ATP-binding domain JE55_RS14790 IPR014017 DNA helicase, UvrD-like, C-terminal JE55_RS14790 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14795 IPR006344 Exodeoxyribonuclease V, alpha subunit JE55_RS14795 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14795 IPR027785 UvrD-like helicase C-terminal domain JE55_RS14800 IPR000352 Peptide chain release factor class I/class II JE55_RS14805 IPR001633 EAL domain JE55_RS14805 IPR029151 Periplasmic sensor domain-like JE55_RS14815 IPR000620 Drug/metabolite transporter JE55_RS14825 IPR008816 Glycine zipper 2TM domain JE55_RS14830 IPR002817 Thiamine biosynthesis protein ThiC JE55_RS14830 IPR025747 ThiC-associated domain JE55_RS14840 IPR014299 Pentapeptide MXKDX repeat protein JE55_RS14845 IPR010634 Protein of unknown function DUF1223 JE55_RS14845 IPR012336 Thioredoxin-like fold JE55_RS14850 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase JE55_RS14850 IPR016174 Di-haem cytochrome, transmembrane JE55_RS14855 IPR000572 Oxidoreductase, molybdopterin-binding domain JE55_RS14865 IPR000620 Drug/metabolite transporter JE55_RS14870 IPR011701 Major facilitator superfamily JE55_RS14870 IPR020846 Major facilitator superfamily domain JE55_RS14875 IPR007136 Protein of unknown function DUF347 JE55_RS14890 IPR004843 Calcineurin-like phosphoesterase domain, apaH type JE55_RS14890 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA JE55_RS14890 IPR029052 Metallo-dependent phosphatase-like JE55_RS14895 IPR003439 ABC transporter-like JE55_RS14895 IPR003593 AAA+ ATPase domain JE55_RS14895 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS14895 IPR012340 Nucleic acid-binding, OB-fold JE55_RS14895 IPR013611 Transport-associated OB, type 2 JE55_RS14895 IPR017871 ABC transporter, conserved site JE55_RS14895 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14900 IPR000515 MetI-like domain JE55_RS14915 IPR000515 MetI-like domain JE55_RS14925 IPR000843 Transcription regulator HTH, LacI JE55_RS14925 IPR001761 Periplasmic binding protein/LacI sugar binding domain JE55_RS14925 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS14925 IPR028082 Periplasmic binding protein-like I JE55_RS14930 IPR023614 Porin domain JE55_RS14945 IPR000160 GGDEF domain JE55_RS14945 IPR029787 Nucleotide cyclase JE55_RS14950 IPR009758 Protein of unknown function DUF1326 JE55_RS14955 IPR018688 Protein of unknown function DUF2182, transmembrane, metal-binding JE55_RS14960 IPR007396 Transcriptional regulator PAI 2-type JE55_RS14960 IPR012349 FMN-binding split barrel JE55_RS14965 IPR000524 Transcription regulator HTH, GntR JE55_RS14965 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14970 IPR000485 AsnC-type HTH domain JE55_RS14970 IPR011008 Dimeric alpha-beta barrel JE55_RS14970 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14970 IPR019887 Transcription regulator AsnC-type, C-terminal JE55_RS14970 IPR019888 Transcription regulator AsnC-type JE55_RS14975 IPR001347 Sugar isomerase (SIS) JE55_RS14975 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising JE55_RS14975 IPR017932 Glutamine amidotransferase type 2 domain JE55_RS14975 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS14980 IPR004294 Carotenoid oxygenase JE55_RS14985 IPR018715 Protein of unknown function DUF2239 JE55_RS14990 IPR000847 Transcription regulator HTH, LysR JE55_RS14990 IPR005119 LysR, substrate-binding JE55_RS14990 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14995 IPR002347 Glucose/ribitol dehydrogenase JE55_RS14995 IPR016040 NAD(P)-binding domain JE55_RS15000 IPR018718 Protein of unknown function DUF2242 JE55_RS15005 IPR008318 Uncharacterised conserved protein UCP030820 JE55_RS15010 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain JE55_RS15010 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain JE55_RS15015 IPR021344 Protein of unknown function DUF2970 JE55_RS15020 IPR000524 Transcription regulator HTH, GntR JE55_RS15020 IPR004839 Aminotransferase, class I/classII JE55_RS15020 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15020 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS15020 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS15020 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS15035 IPR002068 Alpha crystallin/Hsp20 domain JE55_RS15035 IPR008978 HSP20-like chaperone JE55_RS15035 IPR031107 JE55_RS15035 JE55_RS15040 IPR002068 Alpha crystallin/Hsp20 domain JE55_RS15040 IPR008978 HSP20-like chaperone JE55_RS15040 IPR031107 JE55_RS15040 JE55_RS15045 IPR005560 Protein of unknown function DUF326 JE55_RS15050 IPR016133 Insect antifreeze protein JE55_RS15055 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising JE55_RS15055 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal JE55_RS15055 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal JE55_RS15055 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site JE55_RS15060 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal JE55_RS15060 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding JE55_RS15060 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like JE55_RS15060 IPR013328 Dehydrogenase, multihelical JE55_RS15060 IPR016040 NAD(P)-binding domain JE55_RS15060 IPR022694 3-hydroxyacyl-CoA dehydrogenase JE55_RS15065 IPR000847 Transcription regulator HTH, LysR JE55_RS15065 IPR005119 LysR, substrate-binding JE55_RS15065 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15070 IPR004690 Malonate transporter MadL subunit JE55_RS15075 IPR004691 Malonate/sodium symporter MadM subunit JE55_RS15075 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal JE55_RS15085 IPR004165 Coenzyme A transferase family I JE55_RS15085 IPR005777 Malonate decarboxylase, alpha subunit JE55_RS15090 IPR009662 Malonate decarboxylase delta subunit JE55_RS15090 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein JE55_RS15095 IPR000022 Carboxyl transferase JE55_RS15095 IPR017556 Malonate decarboxylase, beta subunit JE55_RS15095 IPR029045 ClpP/crotonase-like domain JE55_RS15100 IPR009648 Malonate decarboxylase gamma subunit JE55_RS15100 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal JE55_RS15100 IPR029045 ClpP/crotonase-like domain JE55_RS15105 IPR017557 Phosphoribosyl-dephospho-CoA transferase JE55_RS15110 IPR002736 Triphosphoribosyl-dephospho-CoA protein JE55_RS15110 IPR017555 Triphosphoribosyl-dephospho-CoA synthase JE55_RS15115 IPR001227 Acyl transferase domain JE55_RS15115 IPR014043 Acyl transferase JE55_RS15115 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JE55_RS15115 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JE55_RS15115 IPR017554 Malonate decarboxylase, McdH subunit JE55_RS15115 IPR020801 Polyketide synthase, acyl transferase domain JE55_RS15120 IPR025202 Phospholipase D-like domain JE55_RS15130 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 JE55_RS15130 IPR022742 Putative lysophospholipase JE55_RS15130 IPR029058 Alpha/Beta hydrolase fold JE55_RS15135 IPR004045 Glutathione S-transferase, N-terminal JE55_RS15135 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS15135 IPR012336 Thioredoxin-like fold JE55_RS15145 IPR005828 General substrate transporter JE55_RS15145 IPR005829 Sugar transporter, conserved site JE55_RS15145 IPR020846 Major facilitator superfamily domain JE55_RS15150 IPR003844 Uncharacterised protein family UPF0060 JE55_RS15155 IPR006054 DNA polymerase III, epsilon subunit JE55_RS15155 IPR006309 DNA polymerase 3, epsilon subunit JE55_RS15155 IPR012337 Ribonuclease H-like domain JE55_RS15155 IPR013520 Exonuclease, RNase T/DNA polymerase III JE55_RS15160 IPR002156 Ribonuclease H domain JE55_RS15160 IPR012337 Ribonuclease H-like domain JE55_RS15160 IPR022892 Ribonuclease H JE55_RS15165 IPR013216 Methyltransferase type 11 JE55_RS15165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS15170 IPR001279 Beta-lactamase-like JE55_RS15170 IPR017782 Hydroxyacylglutathione hydrolase JE55_RS15170 IPR032282 JE55_RS15170 JE55_RS15175 IPR000189 Prokaryotic transglycosylase, active site JE55_RS15175 IPR008258 Lytic transglycosylase-like SLT domain JE55_RS15175 IPR018392 LysM domain JE55_RS15175 IPR023346 Lysozyme-like domain JE55_RS15180 IPR011701 Major facilitator superfamily JE55_RS15180 IPR020846 Major facilitator superfamily domain JE55_RS15190 IPR009057 Homeodomain-like JE55_RS15190 IPR018060 DNA binding HTH domain, AraC-type JE55_RS15190 IPR020449 Transcription regulator HTH, AraC- type JE55_RS15190 IPR032687 JE55_RS15190 JE55_RS15195 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain JE55_RS15195 IPR006274 Carbamoyl-phosphate synthase, small subunit JE55_RS15195 IPR017926 Glutamine amidotransferase JE55_RS15195 IPR029062 Class I glutamine amidotransferase-like JE55_RS15200 IPR001123 Lysine-type exporter protein (LYSE/YGGA) JE55_RS15205 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain JE55_RS15205 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain JE55_RS15205 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain JE55_RS15205 IPR006275 Carbamoyl-phosphate synthase, large subunit JE55_RS15205 IPR011607 Methylglyoxal synthase-like domain JE55_RS15205 IPR013815 ATP-grasp fold, subdomain 1 JE55_RS15205 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS15205 IPR016185 Pre-ATP-grasp domain JE55_RS15210 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal JE55_RS15210 IPR006359 Transcription elongation factor GreA JE55_RS15210 IPR018151 Transcription elongation factor, GreA/GreB, conserved site JE55_RS15210 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal JE55_RS15210 IPR023459 Transcription elongation factor GreA/GreB family JE55_RS15210 IPR028624 Transcription elongation factor GreA/GreB JE55_RS15215 IPR025423 Domain of unknown function DUF4149 JE55_RS15220 IPR001890 RNA-binding, CRM domain JE55_RS15225 IPR002877 Ribosomal RNA methyltransferase FtsJ domain JE55_RS15225 IPR015507 Ribosomal RNA large subunit methyltransferase E JE55_RS15225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS15230 IPR000642 Peptidase M41 JE55_RS15230 IPR003593 AAA+ ATPase domain JE55_RS15230 IPR003959 ATPase, AAA-type, core JE55_RS15230 IPR003960 ATPase, AAA-type, conserved site JE55_RS15230 IPR005936 Peptidase, FtsH JE55_RS15230 IPR011546 Peptidase M41, FtsH extracellular JE55_RS15230 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15235 IPR000489 Pterin-binding JE55_RS15235 IPR006390 Dihydropteroate synthase JE55_RS15235 IPR011005 Dihydropteroate synthase-like JE55_RS15240 IPR005841 Alpha-D-phosphohexomutase superfamily JE55_RS15240 IPR005843 Alpha-D-phosphohexomutase, C-terminal JE55_RS15240 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JE55_RS15240 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JE55_RS15240 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JE55_RS15240 IPR006352 Phosphoglucosamine mutase JE55_RS15240 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JE55_RS15240 IPR016066 Alpha-D-phosphohexomutase, conserved site JE55_RS15245 IPR005673 ABC transporter, phosphate-binding protein PstS JE55_RS15245 IPR024370 PBP domain JE55_RS15250 IPR000515 MetI-like domain JE55_RS15250 IPR011864 Phosphate ABC transporter, permease protein PstC JE55_RS15255 IPR000515 MetI-like domain JE55_RS15255 IPR005672 Phosphate transport system permease protein PstA JE55_RS15260 IPR003439 ABC transporter-like JE55_RS15260 IPR003593 AAA+ ATPase domain JE55_RS15260 IPR005670 Phosphate transport system permease protein 1 JE55_RS15260 IPR017871 ABC transporter, conserved site JE55_RS15260 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15265 IPR026022 PhoU domain JE55_RS15265 IPR028366 Phosphate transport system protein PhoU JE55_RS15270 IPR001789 Signal transduction response regulator, receiver domain JE55_RS15270 IPR001867 Signal transduction response regulator, C-terminal JE55_RS15270 IPR011006 CheY-like superfamily JE55_RS15270 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB JE55_RS15270 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15270 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS15275 IPR000014 PAS domain JE55_RS15275 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15275 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS15275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS15275 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR JE55_RS15275 IPR021766 Protein of unknown function DUF3329 JE55_RS15280 IPR003414 Polyphosphate kinase JE55_RS15280 IPR024953 Polyphosphate kinase middle domain JE55_RS15280 IPR025198 Polyphosphate kinase N-terminal domain JE55_RS15280 IPR025200 Polyphosphate kinase C-terminal domain JE55_RS15285 IPR003695 Ppx/GppA phosphatase JE55_RS15285 IPR022371 Exopolyphosphatase JE55_RS15285 IPR030673 JE55_RS15285 JE55_RS15295 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JE55_RS15295 IPR026841 JE55_RS15295 JE55_RS15315 IPR021225 Protein of unknown function DUF2778 JE55_RS15325 IPR004449 Phosphohistidine phosphatase SixA, subgroup JE55_RS15325 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS15325 IPR029033 Histidine phosphatase superfamily JE55_RS15330 IPR016181 Acyl-CoA N-acyltransferase JE55_RS15350 IPR002528 Multi antimicrobial extrusion protein JE55_RS15355 IPR018741 Protein of unknown function DUF2288 JE55_RS15360 IPR000873 AMP-dependent synthetase/ligase JE55_RS15360 IPR020845 AMP-binding, conserved site JE55_RS15360 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS15365 IPR011055 Duplicated hybrid motif JE55_RS15365 IPR016047 Peptidase M23 JE55_RS15365 IPR018392 LysM domain JE55_RS15370 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase JE55_RS15370 IPR011013 Galactose mutarotase-like domain JE55_RS15370 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup JE55_RS15380 IPR003824 Undecaprenyl-diphosphatase UppP JE55_RS15390 IPR002104 Integrase, catalytic JE55_RS15390 IPR011010 DNA breaking-rejoining enzyme, catalytic core JE55_RS15390 IPR013762 Integrase-like, catalytic core JE55_RS15395 IPR016929 Uncharacterised conserved protein UCP029636 JE55_RS15395 IPR028969 Immunity protein 32 JE55_RS15400 IPR028904 Tox-REase-5 domain JE55_RS15410 IPR025391 Domain of unknown function DUF4123 JE55_RS15415 IPR008727 PAAR motif JE55_RS15420 IPR000551 MerR-type HTH domain JE55_RS15420 IPR007213 Leucine carboxyl methyltransferase JE55_RS15420 IPR009061 DNA binding domain, putative JE55_RS15420 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative JE55_RS15420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS15425 IPR000524 Transcription regulator HTH, GntR JE55_RS15425 IPR004839 Aminotransferase, class I/classII JE55_RS15425 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15425 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS15425 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS15425 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS15430 IPR032710 JE55_RS15430 JE55_RS15435 IPR029039 Flavoprotein-like JE55_RS15440 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JE55_RS15440 IPR012767 Malto-oligosyltrehalose synthase JE55_RS15440 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS15440 IPR013797 Maltooligosyl trehalose synthase, N-terminal JE55_RS15440 IPR015902 Glycoside hydrolase, family 13 JE55_RS15440 IPR017853 Glycoside hydrolase, superfamily JE55_RS15445 IPR003385 Glycoside hydrolase, family 77 JE55_RS15445 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS15445 IPR017853 Glycoside hydrolase, superfamily JE55_RS15450 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JE55_RS15450 IPR012768 Malto-oligosyltrehalose trehalohydrolase JE55_RS15450 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS15450 IPR013783 Immunoglobulin-like fold JE55_RS15450 IPR014756 Immunoglobulin E-set JE55_RS15450 IPR015902 Glycoside hydrolase, family 13 JE55_RS15450 IPR017853 Glycoside hydrolase, superfamily JE55_RS15450 IPR022567 Domain of unknown function DUF3459 JE55_RS15455 IPR004193 Glycoside hydrolase, family 13, N-terminal JE55_RS15455 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JE55_RS15455 IPR011837 Glycogen debranching enzyme, GlgX type JE55_RS15455 IPR013780 Glycosyl hydrolase, family 13, all-beta JE55_RS15455 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS15455 IPR013783 Immunoglobulin-like fold JE55_RS15455 IPR014756 Immunoglobulin E-set JE55_RS15455 IPR015902 Glycoside hydrolase, family 13 JE55_RS15455 IPR017853 Glycoside hydrolase, superfamily JE55_RS15460 IPR004193 Glycoside hydrolase, family 13, N-terminal JE55_RS15460 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JE55_RS15460 IPR006048 Alpha-amylase, C-terminal all beta JE55_RS15460 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB JE55_RS15460 IPR013780 Glycosyl hydrolase, family 13, all-beta JE55_RS15460 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS15460 IPR013783 Immunoglobulin-like fold JE55_RS15460 IPR014756 Immunoglobulin E-set JE55_RS15460 IPR015902 Glycoside hydrolase, family 13 JE55_RS15460 IPR017853 Glycoside hydrolase, superfamily JE55_RS15465 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JE55_RS15465 IPR011009 Protein kinase-like domain JE55_RS15465 IPR012810 Trehalose synthase/alpha-amylase, N-terminal JE55_RS15465 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain JE55_RS15465 IPR013780 Glycosyl hydrolase, family 13, all-beta JE55_RS15465 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS15465 IPR015902 Glycoside hydrolase, family 13 JE55_RS15465 IPR017853 Glycoside hydrolase, superfamily JE55_RS15465 IPR032091 JE55_RS15465 JE55_RS15470 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JE55_RS15470 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS15470 IPR015902 Glycoside hydrolase, family 13 JE55_RS15470 IPR017853 Glycoside hydrolase, superfamily JE55_RS15470 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S JE55_RS15470 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase JE55_RS15480 IPR003961 Fibronectin, type III JE55_RS15480 IPR010126 Esterase, PHB depolymerase JE55_RS15480 IPR013783 Immunoglobulin-like fold JE55_RS15480 IPR029058 Alpha/Beta hydrolase fold JE55_RS15500 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS15500 IPR017853 Glycoside hydrolase, superfamily JE55_RS15500 IPR024745 Glycoside hydrolase, family 44 JE55_RS15505 IPR000847 Transcription regulator HTH, LysR JE55_RS15505 IPR005119 LysR, substrate-binding JE55_RS15505 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15510 IPR001789 Signal transduction response regulator, receiver domain JE55_RS15510 IPR001867 Signal transduction response regulator, C-terminal JE55_RS15510 IPR011006 CheY-like superfamily JE55_RS15510 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15515 IPR025016 Protein of unknown function DUF3955 JE55_RS15520 IPR008617 Uncharacterised protein family, YcgJ JE55_RS15535 IPR001789 Signal transduction response regulator, receiver domain JE55_RS15535 IPR001867 Signal transduction response regulator, C-terminal JE55_RS15535 IPR011006 CheY-like superfamily JE55_RS15535 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15545 IPR005594 YadA-like, C-terminal JE55_RS15545 IPR008635 Coiled stalk of trimeric autotransporter adhesin JE55_RS15545 IPR008640 Head domain of trimeric autotransporter adhesin JE55_RS15545 IPR011049 Serralysin-like metalloprotease, C-terminal JE55_RS15545 IPR024973 ESPR domain JE55_RS15550 IPR006664 Outer membrane protein, bacterial JE55_RS15550 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JE55_RS15550 IPR006690 Outer membrane protein, OmpA-like, conserved site JE55_RS15555 IPR011990 Tetratricopeptide-like helical domain JE55_RS15555 IPR019734 Tetratricopeptide repeat JE55_RS15560 IPR001801 Histone-like protein H-NS JE55_RS15560 IPR027444 Histone-like protein H-NS, C-terminal domain JE55_RS15570 IPR003782 Copper chaperone SCO1/SenC JE55_RS15570 IPR012336 Thioredoxin-like fold JE55_RS15575 IPR009056 Cytochrome c-like domain JE55_RS15580 IPR000772 Ricin B lectin domain JE55_RS15580 IPR006652 Kelch repeat type 1 JE55_RS15580 IPR011043 Galactose oxidase/kelch, beta-propeller JE55_RS15580 IPR013783 Immunoglobulin-like fold JE55_RS15580 IPR014756 Immunoglobulin E-set JE55_RS15580 IPR015202 Domain of unknown function DUF1929 JE55_RS15580 IPR015916 Galactose oxidase, beta-propeller JE55_RS15585 IPR013094 Alpha/beta hydrolase fold-3 JE55_RS15585 IPR029058 Alpha/Beta hydrolase fold JE55_RS15600 IPR010272 Type VI secretion system, VCA0110 JE55_RS15610 IPR008727 PAAR motif JE55_RS15615 IPR006531 Gp5 N-terminal JE55_RS15615 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset JE55_RS15615 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal JE55_RS15615 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain JE55_RS15620 IPR025391 Domain of unknown function DUF4123 JE55_RS15625 IPR021733 Protein of unknown function DUF3304 JE55_RS15630 IPR021733 Protein of unknown function DUF3304 JE55_RS15635 IPR018712 Domain of unknown function DUF2235 JE55_RS15640 IPR006531 Gp5 N-terminal JE55_RS15640 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein JE55_RS15640 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset JE55_RS15640 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal JE55_RS15640 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain JE55_RS15670 IPR006531 Gp5 N-terminal JE55_RS15670 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein JE55_RS15670 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal JE55_RS15670 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain JE55_RS15710 IPR001801 Histone-like protein H-NS JE55_RS15710 IPR027444 Histone-like protein H-NS, C-terminal domain JE55_RS15715 IPR006680 Amidohydrolase 1 JE55_RS15715 IPR032466 JE55_RS15715 JE55_RS15720 IPR005829 Sugar transporter, conserved site JE55_RS15720 IPR011701 Major facilitator superfamily JE55_RS15720 IPR020846 Major facilitator superfamily domain JE55_RS15725 IPR000847 Transcription regulator HTH, LysR JE55_RS15725 IPR005119 LysR, substrate-binding JE55_RS15725 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15730 IPR007893 Spore coat protein U JE55_RS15735 IPR007893 Spore coat protein U JE55_RS15740 IPR007893 Spore coat protein U JE55_RS15740 IPR008966 Adhesion domain JE55_RS15745 IPR008962 PapD-like JE55_RS15745 IPR016147 PapD, N-terminal, bacterial JE55_RS15750 IPR000015 Outer membrane usher protein JE55_RS15750 IPR025949 PapC-like, C-terminal domain JE55_RS15755 IPR007893 Spore coat protein U JE55_RS15760 IPR001789 Signal transduction response regulator, receiver domain JE55_RS15760 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15760 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS15760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS15760 IPR011006 CheY-like superfamily JE55_RS15765 IPR000792 Transcription regulator LuxR, C-terminal JE55_RS15765 IPR001789 Signal transduction response regulator, receiver domain JE55_RS15765 IPR011006 CheY-like superfamily JE55_RS15765 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15765 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS15770 IPR003423 Outer membrane efflux protein JE55_RS15770 IPR010131 RND efflux system, outer membrane lipoprotein, NodT JE55_RS15775 IPR004638 Drug resistance transporter EmrB/QacA subfamily JE55_RS15775 IPR011701 Major facilitator superfamily JE55_RS15775 IPR020846 Major facilitator superfamily domain JE55_RS15780 IPR032317 JE55_RS15780 JE55_RS15790 IPR010758 Trans-2-enoyl-CoA reductase JE55_RS15790 IPR016040 NAD(P)-binding domain JE55_RS15790 IPR024906 Enoyl reductase FAD binding domain JE55_RS15790 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative JE55_RS15795 IPR007312 Phosphoesterase JE55_RS15795 IPR017768 Acid phosphatase, AcpA JE55_RS15795 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha JE55_RS15795 IPR017850 Alkaline-phosphatase-like, core domain JE55_RS15800 IPR004852 Di-haem cytochrome c peroxidase JE55_RS15800 IPR009056 Cytochrome c-like domain JE55_RS15805 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain JE55_RS15810 IPR001764 Glycoside hydrolase, family 3, N-terminal JE55_RS15810 IPR002772 Glycoside hydrolase family 3 C-terminal domain JE55_RS15810 IPR017853 Glycoside hydrolase, superfamily JE55_RS15810 IPR019800 Glycoside hydrolase, family 3, active site JE55_RS15815 IPR032635 JE55_RS15815 JE55_RS15820 IPR000086 NUDIX hydrolase domain JE55_RS15820 IPR015797 NUDIX hydrolase domain-like JE55_RS15820 IPR020084 NUDIX hydrolase, conserved site JE55_RS15820 IPR020476 NUDIX hydrolase JE55_RS15825 IPR000924 Glutamyl/glutaminyl-tRNA synthetase JE55_RS15825 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JE55_RS15825 IPR004514 Glutamine-tRNA synthetase JE55_RS15825 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain JE55_RS15825 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS15825 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain JE55_RS15825 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain JE55_RS15825 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain JE55_RS15825 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain JE55_RS15825 IPR022861 Glutamine-tRNA ligase, bacterial JE55_RS15835 IPR003673 CoA-transferase family III JE55_RS15835 IPR023606 CoA-transferase family III domain JE55_RS15840 IPR002318 Alanine-tRNA ligase, class IIc JE55_RS15840 IPR003156 DHHA1 domain JE55_RS15840 IPR009000 Translation protein, beta-barrel domain JE55_RS15840 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JE55_RS15840 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain JE55_RS15840 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain JE55_RS15840 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal JE55_RS15840 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria JE55_RS15845 IPR000847 Transcription regulator HTH, LysR JE55_RS15845 IPR005119 LysR, substrate-binding JE55_RS15845 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15850 IPR010645 Domain of unknown function DUF1228 JE55_RS15850 IPR020846 Major facilitator superfamily domain JE55_RS15855 IPR001478 PDZ domain JE55_RS15855 IPR001940 Peptidase S1C JE55_RS15855 IPR009003 Trypsin-like cysteine/serine peptidase domain JE55_RS15865 IPR000086 NUDIX hydrolase domain JE55_RS15865 IPR015797 NUDIX hydrolase domain-like JE55_RS15870 IPR002765 Uncharacterised protein family UPF0145 JE55_RS15875 IPR001670 Alcohol dehydrogenase, iron-type JE55_RS15875 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JE55_RS15880 IPR006683 Thioesterase superfamily JE55_RS15880 IPR029069 HotDog domain JE55_RS15885 IPR001851 ABC transporter, permease JE55_RS15890 IPR001851 ABC transporter, permease JE55_RS15890 IPR003439 ABC transporter-like JE55_RS15890 IPR003593 AAA+ ATPase domain JE55_RS15890 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15890 IPR032823 JE55_RS15890 JE55_RS15895 IPR003439 ABC transporter-like JE55_RS15895 IPR003593 AAA+ ATPase domain JE55_RS15895 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15900 IPR011051 RmlC-like cupin domain JE55_RS15900 IPR014710 RmlC-like jelly roll fold JE55_RS15900 IPR021120 KduI/IolB isomerase JE55_RS15900 IPR024203 5-deoxy-glucuronate isomerase, IolB JE55_RS15905 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS15905 IPR030823 JE55_RS15905 JE55_RS15910 IPR000399 TPP-binding enzyme, conserved site JE55_RS15910 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JE55_RS15910 IPR012000 Thiamine pyrophosphate enzyme, central domain JE55_RS15910 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JE55_RS15910 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS15910 IPR029061 Thiamin diphosphate-binding fold JE55_RS15910 IPR030817 JE55_RS15910 JE55_RS15915 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JE55_RS15915 IPR011611 Carbohydrate kinase PfkB JE55_RS15915 IPR018659 Protein of unknown function DUF2090 JE55_RS15915 IPR029056 Ribokinase-like JE55_RS15915 IPR030830 JE55_RS15915 JE55_RS15920 IPR003439 ABC transporter-like JE55_RS15920 IPR003593 AAA+ ATPase domain JE55_RS15920 IPR017871 ABC transporter, conserved site JE55_RS15920 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15925 IPR001851 ABC transporter, permease JE55_RS15930 IPR025997 Periplasmic binding protein domain JE55_RS15930 IPR028082 Periplasmic binding protein-like I JE55_RS15935 IPR000281 Helix-turn-helix protein RpiR JE55_RS15935 IPR001347 Sugar isomerase (SIS) JE55_RS15935 IPR009057 Homeodomain-like JE55_RS15935 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15940 IPR000683 Oxidoreductase, N-terminal JE55_RS15940 IPR004104 Oxidoreductase, C-terminal JE55_RS15940 IPR016040 NAD(P)-binding domain JE55_RS15940 IPR030827 JE55_RS15940 JE55_RS15945 IPR000683 Oxidoreductase, N-terminal JE55_RS15945 IPR004104 Oxidoreductase, C-terminal JE55_RS15945 IPR016040 NAD(P)-binding domain JE55_RS15950 IPR001455 TusA-like domain JE55_RS15960 IPR001789 Signal transduction response regulator, receiver domain JE55_RS15960 IPR001867 Signal transduction response regulator, C-terminal JE55_RS15960 IPR011006 CheY-like superfamily JE55_RS15960 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15960 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS15965 IPR006860 FecR protein JE55_RS15965 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 JE55_RS15965 IPR018392 LysM domain JE55_RS15970 IPR000014 PAS domain JE55_RS15970 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15970 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS15970 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS15970 IPR007890 CHASE2 JE55_RS15970 IPR017181 Signal transduction histidine kinase, CHASE2/PAS sensor domain-containing, predicted JE55_RS15975 IPR025411 Domain of unknown function DUF4136 JE55_RS15980 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type JE55_RS15980 IPR005835 Nucleotidyl transferase JE55_RS15980 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS15985 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JE55_RS15985 IPR002300 Aminoacyl-tRNA synthetase, class Ia JE55_RS15985 IPR002303 Valine-tRNA ligase JE55_RS15985 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JE55_RS15985 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JE55_RS15985 IPR010978 tRNA-binding arm JE55_RS15985 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JE55_RS15985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS15985 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm JE55_RS15990 IPR000212 DNA helicase, UvrD/REP type JE55_RS15990 IPR013986 DExx box DNA helicase domain JE55_RS15990 IPR014016 UvrD-like Helicase, ATP-binding domain JE55_RS15990 IPR014017 DNA helicase, UvrD-like, C-terminal JE55_RS15990 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15995 IPR000845 Nucleoside phosphorylase domain JE55_RS15995 IPR010049 MTA/SAH nucleosidase JE55_RS15995 IPR018017 Nucleoside phosphorylase JE55_RS16000 IPR011701 Major facilitator superfamily JE55_RS16000 IPR020846 Major facilitator superfamily domain JE55_RS16005 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JE55_RS16005 IPR004090 Chemotaxis methyl-accepting receptor JE55_RS16005 IPR024478 4HB MCP domain JE55_RS16015 IPR006143 RND efflux pump, membrane fusion protein JE55_RS16015 IPR032317 JE55_RS16015 JE55_RS16020 IPR012451 Protein of unknown function DUF1656 JE55_RS16025 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein JE55_RS16030 IPR003423 Outer membrane efflux protein JE55_RS16030 IPR010131 RND efflux system, outer membrane lipoprotein, NodT JE55_RS16035 IPR000847 Transcription regulator HTH, LysR JE55_RS16035 IPR005119 LysR, substrate-binding JE55_RS16035 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16045 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type JE55_RS16045 IPR029052 Metallo-dependent phosphatase-like JE55_RS16050 IPR004113 FAD-linked oxidase, C-terminal JE55_RS16050 IPR006094 FAD linked oxidase, N-terminal JE55_RS16050 IPR016164 FAD-linked oxidase-like, C-terminal JE55_RS16050 IPR016166 FAD-binding, type 2 JE55_RS16050 IPR016167 FAD-binding, type 2, subdomain 1 JE55_RS16050 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JE55_RS16050 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JE55_RS16055 IPR018643 Protein of unknown function DUF2069, membrane JE55_RS16060 IPR005025 NADPH-dependent FMN reductase-like JE55_RS16060 IPR010089 Flavoprotein WrbA JE55_RS16060 IPR029039 Flavoprotein-like JE55_RS16065 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16065 IPR017039 Virulence factor BrkB JE55_RS16065 IPR023679 Uncharacterised protein family UPF0761, bacterial JE55_RS16070 IPR009305 Protein of unknown function DUF962 JE55_RS16075 IPR000644 CBS domain JE55_RS16080 IPR002123 Phospholipid/glycerol acyltransferase JE55_RS16080 IPR011701 Major facilitator superfamily JE55_RS16080 IPR020846 Major facilitator superfamily domain JE55_RS16090 IPR000453 Chorismate synthase JE55_RS16090 IPR020541 Chorismate synthase, conserved site JE55_RS16100 IPR007859 Electron transfer flavoprotein-ubiquinone oxidoreductase JE55_RS16100 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS16105 IPR002347 Glucose/ribitol dehydrogenase JE55_RS16105 IPR016040 NAD(P)-binding domain JE55_RS16105 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS16110 IPR029069 HotDog domain JE55_RS16120 IPR001547 Glycoside hydrolase, family 5 JE55_RS16120 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS16120 IPR017853 Glycoside hydrolase, superfamily JE55_RS16125 IPR000014 PAS domain JE55_RS16125 IPR000792 Transcription regulator LuxR, C-terminal JE55_RS16125 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16125 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS16130 IPR004163 Coenzyme A transferase binding site JE55_RS16130 IPR004165 Coenzyme A transferase family I JE55_RS16130 IPR012792 3-oxoacid CoA-transferase, subunit A JE55_RS16135 IPR004164 Coenzyme A transferase active site JE55_RS16135 IPR004165 Coenzyme A transferase family I JE55_RS16135 IPR012791 3-oxoacid CoA-transferase, subunit B JE55_RS16140 IPR002347 Glucose/ribitol dehydrogenase JE55_RS16140 IPR016040 NAD(P)-binding domain JE55_RS16145 IPR002509 Polysaccharide deacetylase JE55_RS16145 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JE55_RS16150 IPR009959 Polyketide cyclase SnoaL-like domain JE55_RS16150 IPR032710 JE55_RS16150 JE55_RS16155 IPR000847 Transcription regulator HTH, LysR JE55_RS16155 IPR005119 LysR, substrate-binding JE55_RS16155 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16165 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS16165 IPR029058 Alpha/Beta hydrolase fold JE55_RS16170 IPR006175 YjgF/Yer057p/UK114 family JE55_RS16170 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS16175 IPR002912 ACT domain JE55_RS16175 IPR003607 HD/PDEase domain JE55_RS16175 IPR004095 TGS JE55_RS16175 IPR004811 RelA/SpoT family JE55_RS16175 IPR007685 RelA/SpoT JE55_RS16175 IPR012675 Beta-grasp domain JE55_RS16175 IPR012676 TGS-like JE55_RS16185 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain JE55_RS16185 IPR002320 Threonine-tRNA ligase, class IIa JE55_RS16185 IPR004095 TGS JE55_RS16185 IPR004154 Anticodon-binding JE55_RS16185 IPR012675 Beta-grasp domain JE55_RS16185 IPR012676 TGS-like JE55_RS16185 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JE55_RS16185 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain JE55_RS16190 IPR001288 Translation initiation factor 3 JE55_RS16190 IPR019813 Translation initiation factor 3, conserved site JE55_RS16190 IPR019814 Translation initiation factor 3, N-terminal JE55_RS16190 IPR019815 Translation initiation factor 3, C-terminal JE55_RS16195 IPR001706 Ribosomal protein L35, non-mitochondrial JE55_RS16195 IPR018265 Ribosomal protein L35, conserved site JE55_RS16195 IPR021137 Ribosomal protein L35 JE55_RS16200 IPR005813 Ribosomal protein L20 JE55_RS16205 IPR002319 Phenylalanyl-tRNA synthetase JE55_RS16205 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal JE55_RS16205 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit JE55_RS16205 IPR010978 tRNA-binding arm JE55_RS16205 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial JE55_RS16210 IPR002547 tRNA-binding domain JE55_RS16210 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit JE55_RS16210 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding JE55_RS16210 IPR005146 B3/B4 tRNA-binding domain JE55_RS16210 IPR005147 tRNA synthetase, B5-domain JE55_RS16210 IPR009061 DNA binding domain, putative JE55_RS16210 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16210 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 JE55_RS16215 IPR000119 Histone-like bacterial DNA-binding protein JE55_RS16215 IPR005684 Integration host factor, alpha subunit JE55_RS16215 IPR010992 Integration host factor (IHF)-like DNA-binding domain JE55_RS16215 IPR020816 Histone-like DNA-binding protein, conserved site JE55_RS16220 IPR000551 MerR-type HTH domain JE55_RS16220 IPR009061 DNA binding domain, putative JE55_RS16230 IPR002656 Acyltransferase 3 JE55_RS16240 IPR021847 Protein of unknown function DUF3443 JE55_RS16250 IPR010653 Lipoprotein, NlpB JE55_RS16255 IPR007138 Antibiotic biosynthesis monooxygenase-like domain JE55_RS16255 IPR011008 Dimeric alpha-beta barrel JE55_RS16270 IPR003848 Domain of unknown function DUF218 JE55_RS16270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS16285 IPR025161 Putative transposase IS4/IS5 family JE55_RS16290 IPR000847 Transcription regulator HTH, LysR JE55_RS16290 IPR005119 LysR, substrate-binding JE55_RS16290 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16295 IPR005234 Chromosome segregation/condensation protein ScpB JE55_RS16295 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16300 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JE55_RS16300 IPR002942 RNA-binding S4 domain JE55_RS16300 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F JE55_RS16300 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JE55_RS16300 IPR020103 Pseudouridine synthase, catalytic domain JE55_RS16305 IPR003728 Ribosome maturation factor RimP JE55_RS16305 IPR028989 Ribosome maturation factor RimP, N-terminal JE55_RS16305 IPR028998 Ribosome maturation factor RimP, C-terminal JE55_RS16310 IPR003029 Ribosomal protein S1, RNA-binding domain JE55_RS16310 IPR004087 K Homology domain JE55_RS16310 IPR009019 K homology domain, prokaryotic type JE55_RS16310 IPR010213 Transcription termination factor NusA JE55_RS16310 IPR010214 Transcription termination factor NusA, C-terminal duplication JE55_RS16310 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical JE55_RS16310 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16310 IPR013735 Transcription factor NusA, N-terminal JE55_RS16310 IPR015946 K homology domain-like, alpha/beta JE55_RS16310 IPR022967 RNA-binding domain, S1 JE55_RS16310 IPR025249 KH domain, NusA-like JE55_RS16310 IPR030842 JE55_RS16310 JE55_RS16315 IPR000178 Translation initiation factor aIF-2, bacterial-like JE55_RS16315 IPR005225 Small GTP-binding protein domain JE55_RS16315 IPR006847 Translation initiation factor IF-2, N-terminal JE55_RS16315 IPR009000 Translation protein, beta-barrel domain JE55_RS16315 IPR009061 DNA binding domain, putative JE55_RS16315 IPR013575 Initiation factor 2 associated domain, bacterial JE55_RS16315 IPR023115 Translation initiation factor IF- 2, domain 3 JE55_RS16315 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16320 IPR000238 Ribosome-binding factor A JE55_RS16320 IPR015946 K homology domain-like, alpha/beta JE55_RS16320 IPR023799 Ribosome-binding factor A domain JE55_RS16325 IPR002501 Pseudouridine synthase II JE55_RS16325 IPR014780 tRNA pseudouridine synthase II, TruB JE55_RS16325 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal JE55_RS16325 IPR015947 PUA-like domain JE55_RS16325 IPR020103 Pseudouridine synthase, catalytic domain JE55_RS16325 IPR032819 JE55_RS16325 JE55_RS16330 IPR004638 Drug resistance transporter EmrB/QacA subfamily JE55_RS16330 IPR011701 Major facilitator superfamily JE55_RS16330 IPR020846 Major facilitator superfamily domain JE55_RS16335 IPR005694 Efflux pump membrane protein Emr JE55_RS16335 IPR006143 RND efflux pump, membrane fusion protein JE55_RS16335 IPR032317 JE55_RS16335 JE55_RS16340 IPR003423 Outer membrane efflux protein JE55_RS16340 IPR010131 RND efflux system, outer membrane lipoprotein, NodT JE55_RS16345 IPR000835 MarR-type HTH domain JE55_RS16345 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16350 IPR000640 Translation elongation factor EFG, V domain JE55_RS16350 IPR000795 Elongation factor, GTP-binding domain JE55_RS16350 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 JE55_RS16350 IPR005225 Small GTP-binding protein domain JE55_RS16350 IPR006298 GTP-binding protein TypA JE55_RS16350 IPR009000 Translation protein, beta-barrel domain JE55_RS16350 IPR009022 Elongation factor G, III-V domain JE55_RS16350 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16350 IPR031157 JE55_RS16350 JE55_RS16365 IPR001017 Dehydrogenase, E1 component JE55_RS16365 IPR005475 Transketolase-like, pyrimidine-binding domain JE55_RS16365 IPR011603 2-oxoglutarate dehydrogenase E1 component JE55_RS16365 IPR029061 Thiamin diphosphate-binding fold JE55_RS16365 IPR031717 JE55_RS16365 JE55_RS16365 IPR032106 JE55_RS16365 JE55_RS16370 IPR000089 Biotin/lipoyl attachment JE55_RS16370 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain JE55_RS16370 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JE55_RS16370 IPR004167 E3 binding JE55_RS16370 IPR006255 Dihydrolipoamide succinyltransferase JE55_RS16370 IPR011053 Single hybrid motif JE55_RS16370 IPR023213 Chloramphenicol acetyltransferase-like domain JE55_RS16375 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JE55_RS16375 IPR006258 Dihydrolipoamide dehydrogenase JE55_RS16375 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site JE55_RS16375 IPR016156 FAD/NAD-linked reductase, dimerisation domain JE55_RS16375 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS16380 IPR005654 ATPase, AFG1-like JE55_RS16380 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16385 IPR025161 Putative transposase IS4/IS5 family JE55_RS16390 IPR019223 Domain of unknown function DUF2147 JE55_RS16395 IPR013686 Polypeptide-transport-associated, ShlB-type JE55_RS16400 IPR031929 JE55_RS16400 JE55_RS16405 IPR031929 JE55_RS16405 JE55_RS16415 IPR007047 Flp/Fap pilin component JE55_RS16420 IPR000045 Prepilin type IV endopeptidase, peptidase domain JE55_RS16420 IPR014032 Peptidase A24A, prepilin type IV, bacterial JE55_RS16425 IPR012495 TadE-like JE55_RS16430 IPR013974 SAF domain JE55_RS16430 IPR017592 Pilus assembly, Flp-type CpaB JE55_RS16430 IPR031571 JE55_RS16430 JE55_RS16435 IPR001775 GspD/PilQ family JE55_RS16435 IPR004846 Type II/III secretion system JE55_RS16435 IPR032789 JE55_RS16435 JE55_RS16440 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16440 IPR031580 JE55_RS16440 JE55_RS16445 IPR001482 Type II secretion system protein E JE55_RS16445 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16450 IPR018076 Type II secretion system F domain JE55_RS16455 IPR018076 Type II secretion system F domain JE55_RS16460 IPR011990 Tetratricopeptide-like helical domain JE55_RS16460 IPR016931 Uncharacterised conserved protein UCP029658, TPR JE55_RS16460 IPR019734 Tetratricopeptide repeat JE55_RS16465 IPR022053 Protein of unknown function DUF3613 JE55_RS16470 IPR018705 Domain of unknown function DUF2134, membrane JE55_RS16475 IPR002078 RNA polymerase sigma factor 54 interaction domain JE55_RS16475 IPR002197 DNA binding HTH domain, Fis-type JE55_RS16475 IPR003593 AAA+ ATPase domain JE55_RS16475 IPR009057 Homeodomain-like JE55_RS16475 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JE55_RS16475 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS16475 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS16475 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16480 IPR021350 Protein of unknown function DUF2968 JE55_RS16485 IPR005001 Host factor Hfq JE55_RS16485 IPR010920 Like-Sm (LSM) domain JE55_RS16490 IPR024446 JE55_RS16490 JE55_RS16495 IPR011465 Protein of unknown function DUF1571 JE55_RS16500 IPR000873 AMP-dependent synthetase/ligase JE55_RS16500 IPR020845 AMP-binding, conserved site JE55_RS16500 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS16505 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS16505 IPR009057 Homeodomain-like JE55_RS16505 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS16505 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS16505 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JE55_RS16510 IPR005828 General substrate transporter JE55_RS16510 IPR005829 Sugar transporter, conserved site JE55_RS16510 IPR011701 Major facilitator superfamily JE55_RS16510 IPR020846 Major facilitator superfamily domain JE55_RS16515 IPR000182 GNAT domain JE55_RS16515 IPR016181 Acyl-CoA N-acyltransferase JE55_RS16520 IPR003115 ParB/Sulfiredoxin JE55_RS16520 IPR014956 Putative ParB-like nuclease JE55_RS16520 IPR016932 Uncharacterised conserved protein UCP029669 JE55_RS16525 IPR001902 Sulphate anion transporter JE55_RS16525 IPR002645 STAS domain JE55_RS16525 IPR011547 Sulphate transporter JE55_RS16530 IPR003137 Protease-associated domain, PA JE55_RS16535 IPR007312 Phosphoesterase JE55_RS16535 IPR017850 Alkaline-phosphatase-like, core domain JE55_RS16540 IPR003660 HAMP linker domain JE55_RS16540 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JE55_RS16555 IPR003029 Ribosomal protein S1, RNA-binding domain JE55_RS16555 IPR004476 Ribonuclease II/ribonuclease R JE55_RS16555 IPR011129 Cold shock protein JE55_RS16555 IPR011805 Ribonuclease R JE55_RS16555 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16555 IPR013223 Ribonuclease B, N-terminal OB domain JE55_RS16555 IPR022966 Ribonuclease II/R, conserved site JE55_RS16555 IPR022967 RNA-binding domain, S1 JE55_RS16560 IPR001537 tRNA/rRNA methyltransferase, SpoU type JE55_RS16560 IPR004441 RNA methyltransferase TrmH family JE55_RS16560 IPR013123 RNA 2-O ribose methyltransferase, substrate binding JE55_RS16560 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB JE55_RS16560 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS16560 IPR029028 Alpha/beta knot methyltransferases JE55_RS16560 IPR029064 50S ribosomal protein L30e-like JE55_RS16570 IPR002477 Peptidoglycan binding-like JE55_RS16570 IPR002502 N-acetylmuramoyl-L-alanine amidase domain JE55_RS16575 IPR004788 Ribose 5-phosphate isomerase, type A JE55_RS16575 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup JE55_RS16580 IPR000524 Transcription regulator HTH, GntR JE55_RS16580 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS16580 IPR011711 GntR, C-terminal JE55_RS16580 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16585 IPR000683 Oxidoreductase, N-terminal JE55_RS16585 IPR016040 NAD(P)-binding domain JE55_RS16590 IPR000515 MetI-like domain JE55_RS16590 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family JE55_RS16595 IPR001320 Ionotropic glutamate receptor JE55_RS16595 IPR001638 Extracellular solute-binding protein, family 3 JE55_RS16595 IPR018313 Extracellular solute-binding protein, family 3, conserved site JE55_RS16600 IPR001295 Dihydroorotate dehydrogenase, conserved site JE55_RS16600 IPR005719 Dihydroorotate dehydrogenase, class 2 JE55_RS16600 IPR005720 Dihydroorotate dehydrogenase domain JE55_RS16600 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 JE55_RS16600 IPR013785 Aldolase-type TIM barrel JE55_RS16605 IPR007471 Arginine-tRNA-protein transferase, N-terminal JE55_RS16605 IPR007472 Arginine-tRNA-protein transferase, C-terminal JE55_RS16605 IPR016181 Acyl-CoA N-acyltransferase JE55_RS16605 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic JE55_RS16605 IPR030700 JE55_RS16605 JE55_RS16610 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase JE55_RS16610 IPR016181 Acyl-CoA N-acyltransferase JE55_RS16615 IPR000086 NUDIX hydrolase domain JE55_RS16615 IPR015797 NUDIX hydrolase domain-like JE55_RS16615 IPR020084 NUDIX hydrolase, conserved site JE55_RS16615 IPR020476 NUDIX hydrolase JE55_RS16615 IPR029401 Nudix hydrolase, N-terminal JE55_RS16625 IPR005624 Domain of unknown function DUF336 JE55_RS16625 IPR010371 Uncharacterised protein family UPF0303 JE55_RS16630 IPR000390 Small multidrug resistance protein family JE55_RS16635 IPR014748 Crontonase, C-terminal JE55_RS16635 IPR029045 ClpP/crotonase-like domain JE55_RS16635 IPR032259 JE55_RS16635 JE55_RS16645 IPR011251 Luciferase-like domain JE55_RS16645 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent JE55_RS16650 IPR000515 MetI-like domain JE55_RS16655 IPR003439 ABC transporter-like JE55_RS16655 IPR003593 AAA+ ATPase domain JE55_RS16655 IPR017871 ABC transporter, conserved site JE55_RS16655 IPR017875 ABC transporter, aliphatic sulphonate import, ATP-binding protein JE55_RS16655 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16660 IPR004606 Molybdenum-pterin binding JE55_RS16660 IPR005116 Transport-associated OB, type 1 JE55_RS16660 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS16665 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16675 IPR008490 Transposase InsH, N-terminal JE55_RS16675 IPR025668 Transposase DDE domain JE55_RS16685 IPR001269 tRNA-dihydrouridine synthase JE55_RS16685 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN JE55_RS16685 IPR013785 Aldolase-type TIM barrel JE55_RS16685 IPR018517 tRNA-dihydrouridine synthase, conserved site JE55_RS16690 IPR001991 Sodium:dicarboxylate symporter JE55_RS16690 IPR033380 JE55_RS16690 JE55_RS16700 IPR002577 Helix-turn-helix, HxlR type JE55_RS16700 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16705 IPR003736 Phenylacetic acid degradation-related domain JE55_RS16705 IPR006683 Thioesterase superfamily JE55_RS16705 IPR029069 HotDog domain JE55_RS16710 IPR001395 Aldo/keto reductase JE55_RS16710 IPR023210 NADP-dependent oxidoreductase domain JE55_RS16715 IPR005524 Protein of unknown function DUF318, transmembrane JE55_RS16725 IPR000412 ABC-2 transporter JE55_RS16725 IPR005981 ABC-2 type transporter, NodJ JE55_RS16725 IPR013525 ABC-2 type transporter JE55_RS16730 IPR003439 ABC transporter-like JE55_RS16730 IPR003593 AAA+ ATPase domain JE55_RS16730 IPR005978 Nodulation ABC transporter, NodI JE55_RS16730 IPR017871 ABC transporter, conserved site JE55_RS16730 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16735 IPR006015 Universal stress protein A JE55_RS16735 IPR006016 UspA JE55_RS16735 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS16740 IPR021330 Protein of unknown function DUF2939 JE55_RS16750 IPR006197 Peptidase S24, LexA-like JE55_RS16750 IPR006199 LexA repressor, DNA-binding domain JE55_RS16750 IPR006200 LexA repressor JE55_RS16750 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16750 IPR015927 Peptidase S24/S26A/S26B/S26C JE55_RS16750 IPR019759 Peptidase S24/S26A/S26B JE55_RS16750 IPR028360 Peptidase S24/S26, beta-ribbon domain JE55_RS16755 IPR000957 Sulphate/thiosulphate-binding, conserved site JE55_RS16755 IPR005669 Thiosulphate/Sulfate-binding protein JE55_RS16760 IPR000515 MetI-like domain JE55_RS16760 IPR005667 Sulphate ABC transporter permease protein 2 JE55_RS16760 IPR011865 Sulphate ABC transporter, permease protein CysT JE55_RS16765 IPR000515 MetI-like domain JE55_RS16765 IPR005667 Sulphate ABC transporter permease protein 2 JE55_RS16765 IPR011866 Sulphate ABC transporter, permease protein CysW JE55_RS16770 IPR003439 ABC transporter-like JE55_RS16770 IPR003593 AAA+ ATPase domain JE55_RS16770 IPR005666 Sulphate transport system permease protein 1 JE55_RS16770 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS16770 IPR017871 ABC transporter, conserved site JE55_RS16770 IPR024765 TOBE-like domain JE55_RS16770 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16775 IPR000847 Transcription regulator HTH, LysR JE55_RS16775 IPR005119 LysR, substrate-binding JE55_RS16775 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16780 IPR025997 Periplasmic binding protein domain JE55_RS16780 IPR028082 Periplasmic binding protein-like I JE55_RS16785 IPR003439 ABC transporter-like JE55_RS16785 IPR003593 AAA+ ATPase domain JE55_RS16785 IPR017871 ABC transporter, conserved site JE55_RS16785 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16790 IPR001851 ABC transporter, permease JE55_RS16795 IPR000843 Transcription regulator HTH, LacI JE55_RS16795 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS16795 IPR028082 Periplasmic binding protein-like I JE55_RS16800 IPR002139 Ribokinase JE55_RS16800 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JE55_RS16800 IPR011611 Carbohydrate kinase PfkB JE55_RS16800 IPR011877 Ribokinase, bacterial JE55_RS16800 IPR029056 Ribokinase-like JE55_RS16805 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding JE55_RS16805 IPR003660 HAMP linker domain JE55_RS16805 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JE55_RS16805 IPR004090 Chemotaxis methyl-accepting receptor JE55_RS16810 IPR010650 PrkA C-terminal domain JE55_RS16810 IPR013153 PrkA AAA domain JE55_RS16810 IPR016230 Serine-protein kinase, PrkA JE55_RS16810 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16815 IPR002035 von Willebrand factor, type A JE55_RS16815 IPR006698 Thermus phage phiYS40, Orf56 JE55_RS16820 IPR007390 Sporulation stage V, protein R JE55_RS16825 IPR004736 Citrate-proton symport JE55_RS16825 IPR005829 Sugar transporter, conserved site JE55_RS16825 IPR011701 Major facilitator superfamily JE55_RS16825 IPR020846 Major facilitator superfamily domain JE55_RS16835 IPR008160 Collagen triple helix repeat JE55_RS16840 IPR003439 ABC transporter-like JE55_RS16840 IPR003593 AAA+ ATPase domain JE55_RS16840 IPR017871 ABC transporter, conserved site JE55_RS16840 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16845 IPR000515 MetI-like domain JE55_RS16850 IPR007047 Flp/Fap pilin component JE55_RS16855 IPR000045 Prepilin type IV endopeptidase, peptidase domain JE55_RS16860 IPR017592 Pilus assembly, Flp-type CpaB JE55_RS16860 IPR031571 JE55_RS16860 JE55_RS16865 IPR001775 GspD/PilQ family JE55_RS16865 IPR004846 Type II/III secretion system JE55_RS16865 IPR032789 JE55_RS16865 JE55_RS16870 IPR019027 Pilus biogenesis CpaD-related JE55_RS16875 IPR011006 CheY-like superfamily JE55_RS16875 IPR025669 AAA domain JE55_RS16875 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16885 IPR018076 Type II secretion system F domain JE55_RS16890 IPR018076 Type II secretion system F domain JE55_RS16895 IPR011990 Tetratricopeptide-like helical domain JE55_RS16900 IPR012495 TadE-like JE55_RS16905 IPR012495 TadE-like JE55_RS16905 IPR018705 Domain of unknown function DUF2134, membrane JE55_RS16910 IPR001638 Extracellular solute-binding protein, family 3 JE55_RS16920 IPR000515 MetI-like domain JE55_RS16920 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family JE55_RS16925 IPR000515 MetI-like domain JE55_RS16925 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family JE55_RS16930 IPR011055 Duplicated hybrid motif JE55_RS16930 IPR016047 Peptidase M23 JE55_RS16935 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS16935 IPR009057 Homeodomain-like JE55_RS16935 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS16935 IPR013572 Transcription regulator MAATS, C-terminal JE55_RS16935 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS16940 IPR006143 RND efflux pump, membrane fusion protein JE55_RS16940 IPR032317 JE55_RS16940 JE55_RS16945 IPR001036 Acriflavin resistance protein JE55_RS16945 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 JE55_RS16945 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS16960 IPR000259 Fimbrial-type adhesion domain JE55_RS16960 IPR008966 Adhesion domain JE55_RS16965 IPR000015 Outer membrane usher protein JE55_RS16965 IPR018030 Fimbrial membrane usher, conserved site JE55_RS16965 IPR025885 PapC, N-terminal domain JE55_RS16965 IPR025949 PapC-like, C-terminal domain JE55_RS16970 IPR001829 Pili assembly chaperone, bacterial JE55_RS16970 IPR008962 PapD-like JE55_RS16970 IPR016147 PapD, N-terminal, bacterial JE55_RS16970 IPR016148 Pili assembly chaperone, C-terminal domain JE55_RS16970 IPR018046 Pili assembly chaperone, conserved site JE55_RS16975 IPR000259 Fimbrial-type adhesion domain JE55_RS16975 IPR008966 Adhesion domain JE55_RS16980 IPR003439 ABC transporter-like JE55_RS16980 IPR003593 AAA+ ATPase domain JE55_RS16980 IPR011527 ABC transporter type 1, transmembrane domain JE55_RS16980 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16985 IPR001962 Asparagine synthase JE55_RS16985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS16985 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS16990 IPR032708 JE55_RS16990 JE55_RS16995 IPR003313 AraC-type arabinose-binding/dimerisation domain JE55_RS16995 IPR009057 Homeodomain-like JE55_RS16995 IPR014710 RmlC-like jelly roll fold JE55_RS16995 IPR018060 DNA binding HTH domain, AraC-type JE55_RS16995 IPR018062 HTH domain AraC-type, conserved site JE55_RS17000 IPR025997 Periplasmic binding protein domain JE55_RS17000 IPR028082 Periplasmic binding protein-like I JE55_RS17005 IPR003439 ABC transporter-like JE55_RS17005 IPR003593 AAA+ ATPase domain JE55_RS17005 IPR017871 ABC transporter, conserved site JE55_RS17005 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17010 IPR001851 ABC transporter, permease JE55_RS17015 IPR002085 Alcohol dehydrogenase superfamily, zinc-type JE55_RS17015 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site JE55_RS17015 IPR011032 GroES (chaperonin 10)-like JE55_RS17015 IPR013149 Alcohol dehydrogenase, C-terminal JE55_RS17015 IPR013154 Alcohol dehydrogenase GroES-like JE55_RS17015 IPR016040 NAD(P)-binding domain JE55_RS17020 IPR000577 JE55_RS17020 JE55_RS17020 IPR018483 Carbohydrate kinase, FGGY, conserved site JE55_RS17020 IPR018484 Carbohydrate kinase, FGGY, N-terminal JE55_RS17020 IPR018485 Carbohydrate kinase, FGGY, C-terminal JE55_RS17025 IPR002347 Glucose/ribitol dehydrogenase JE55_RS17025 IPR016040 NAD(P)-binding domain JE55_RS17025 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS17035 IPR007627 RNA polymerase sigma-70 region 2 JE55_RS17035 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17035 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JE55_RS17035 IPR013324 RNA polymerase sigma factor, region 3/4 JE55_RS17035 IPR013325 RNA polymerase sigma factor, region 2 JE55_RS17035 IPR014284 RNA polymerase sigma-70 like domain JE55_RS17040 IPR005153 MbtH-like protein JE55_RS17045 IPR003819 Taurine catabolism dioxygenase TauD/TfdA JE55_RS17050 IPR003439 ABC transporter-like JE55_RS17050 IPR003593 AAA+ ATPase domain JE55_RS17050 IPR017871 ABC transporter, conserved site JE55_RS17050 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17055 IPR000522 ABC transporter, permease protein JE55_RS17055 IPR029022 ABC transporter, BtuC-like JE55_RS17060 IPR008090 Ferric iron reductase JE55_RS17060 IPR022770 Ferric iron reductase FhuF domain JE55_RS17060 IPR024726 Ferric iron reductase, C-terminal JE55_RS17065 IPR002491 ABC transporter periplasmic binding domain JE55_RS17065 IPR008091 Ferrichrome-binding periplasmic protein JE55_RS17070 IPR018531 Domain of unknown function DUF1993 JE55_RS17070 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase JE55_RS17080 IPR003439 ABC transporter-like JE55_RS17080 IPR003593 AAA+ ATPase domain JE55_RS17080 IPR005898 Cyclic peptide transporter JE55_RS17080 IPR011527 ABC transporter type 1, transmembrane domain JE55_RS17080 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17085 IPR000873 AMP-dependent synthetase/ligase JE55_RS17085 IPR001242 Condensation domain JE55_RS17085 IPR006162 Phosphopantetheine attachment site JE55_RS17085 IPR009081 Acyl carrier protein-like JE55_RS17085 IPR010060 Non-ribosomal peptide synthase JE55_RS17085 IPR010071 Amino acid adenylation domain JE55_RS17085 IPR020806 Polyketide synthase, phosphopantetheine-binding domain JE55_RS17085 IPR020845 AMP-binding, conserved site JE55_RS17085 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17090 IPR000873 AMP-dependent synthetase/ligase JE55_RS17090 IPR001242 Condensation domain JE55_RS17090 IPR006162 Phosphopantetheine attachment site JE55_RS17090 IPR009081 Acyl carrier protein-like JE55_RS17090 IPR010071 Amino acid adenylation domain JE55_RS17090 IPR020845 AMP-binding, conserved site JE55_RS17090 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17095 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS17095 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase JE55_RS17100 IPR000531 TonB-dependent receptor, beta-barrel JE55_RS17100 IPR010105 TonB-dependent siderophore receptor JE55_RS17100 IPR012910 TonB-dependent receptor, plug JE55_RS17105 IPR002376 Formyl transferase, N-terminal JE55_RS17115 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS17115 IPR011698 CobB/CobQ-like glutamine amidotransferase JE55_RS17115 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17115 IPR029062 Class I glutamine amidotransferase-like JE55_RS17120 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR JE55_RS17120 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17125 IPR002750 CobE/GbiG C-terminal domain JE55_RS17135 IPR004688 Nickel/cobalt transporter, high-affinity, bacteria JE55_RS17135 IPR011541 Nickel/cobalt transporter, high-affinity JE55_RS17140 IPR003495 CobW/HypB/UreG domain JE55_RS17140 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS17140 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW JE55_RS17140 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17145 IPR003672 CobN/magnesium chelatase JE55_RS17145 IPR011953 Cobaltochelatase, CobN subunit JE55_RS17155 IPR003593 AAA+ ATPase domain JE55_RS17155 IPR011704 ATPase, dynein-related, AAA domain JE55_RS17155 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17160 IPR002035 von Willebrand factor, type A JE55_RS17165 IPR003140 Phospholipase/carboxylesterase/thioesterase JE55_RS17165 IPR029058 Alpha/Beta hydrolase fold JE55_RS17175 IPR001223 Glycoside hydrolase, family 18, catalytic domain JE55_RS17175 IPR003610 Carbohydrate-binding module family 5/12 JE55_RS17175 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS17175 IPR017853 Glycoside hydrolase, superfamily JE55_RS17180 IPR000878 Tetrapyrrole methylase JE55_RS17180 IPR006363 Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core JE55_RS17180 IPR014776 Tetrapyrrole methylase, subdomain 2 JE55_RS17180 IPR014777 Tetrapyrrole methylase, subdomain 1 JE55_RS17180 IPR021744 Cobalamin synthesis G, N-terminal JE55_RS17185 IPR000878 Tetrapyrrole methylase JE55_RS17185 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site JE55_RS17185 IPR006364 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core JE55_RS17185 IPR012382 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase JE55_RS17185 IPR014777 Tetrapyrrole methylase, subdomain 1 JE55_RS17190 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase JE55_RS17195 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain JE55_RS17195 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain JE55_RS17195 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like JE55_RS17200 IPR000878 Tetrapyrrole methylase JE55_RS17200 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase JE55_RS17200 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase JE55_RS17200 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit JE55_RS17200 IPR014776 Tetrapyrrole methylase, subdomain 2 JE55_RS17200 IPR014777 Tetrapyrrole methylase, subdomain 1 JE55_RS17200 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS17205 IPR002748 Cobalamin (vitamin B12) biosynthesis CbiD JE55_RS17210 IPR003723 Precorrin-6x reductase JE55_RS17220 IPR000878 Tetrapyrrole methylase JE55_RS17220 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site JE55_RS17220 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase JE55_RS17220 IPR014776 Tetrapyrrole methylase, subdomain 2 JE55_RS17220 IPR014777 Tetrapyrrole methylase, subdomain 1 JE55_RS17225 IPR003790 Protein of unknown function DUF187 JE55_RS17225 IPR013783 Immunoglobulin-like fold JE55_RS17225 IPR017853 Glycoside hydrolase, superfamily JE55_RS17230 IPR011701 Major facilitator superfamily JE55_RS17230 IPR020846 Major facilitator superfamily domain JE55_RS17235 IPR000835 MarR-type HTH domain JE55_RS17235 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17235 IPR023187 Transcriptional regulator MarR-type, conserved site JE55_RS17240 IPR000709 Leu/Ile/Val-binding protein JE55_RS17240 IPR028081 Leucine-binding protein domain JE55_RS17240 IPR028082 Periplasmic binding protein-like I JE55_RS17250 IPR004045 Glutathione S-transferase, N-terminal JE55_RS17250 IPR004046 Glutathione S-transferase, C-terminal JE55_RS17250 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS17250 IPR012336 Thioredoxin-like fold JE55_RS17255 IPR000847 Transcription regulator HTH, LysR JE55_RS17255 IPR005119 LysR, substrate-binding JE55_RS17255 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17260 IPR005624 Domain of unknown function DUF336 JE55_RS17265 IPR002347 Glucose/ribitol dehydrogenase JE55_RS17265 IPR016040 NAD(P)-binding domain JE55_RS17265 IPR020904 Short-chain dehydrogenase/reductase, conserved site JE55_RS17270 IPR001048 Aspartate/glutamate/uridylate kinase JE55_RS17270 IPR003964 Carbamate kinase JE55_RS17275 IPR002292 Ornithine/putrescine carbamoyltransferase JE55_RS17275 IPR006130 Aspartate/ornithine carbamoyltransferase JE55_RS17275 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain JE55_RS17275 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding JE55_RS17275 IPR024904 Ornithine carbamoyltransferase JE55_RS17280 IPR003876 Arginine deiminase JE55_RS17280 IPR033199 JE55_RS17280 JE55_RS17285 IPR002293 Amino acid/polyamine transporter I JE55_RS17285 IPR004754 Amino acid antiporter JE55_RS17285 IPR022461 Arginine/ornithine antiporter JE55_RS17295 IPR000515 MetI-like domain JE55_RS17300 IPR003439 ABC transporter-like JE55_RS17300 IPR003593 AAA+ ATPase domain JE55_RS17300 IPR017871 ABC transporter, conserved site JE55_RS17300 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17305 IPR000515 MetI-like domain JE55_RS17310 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain JE55_RS17315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS17320 IPR011701 Major facilitator superfamily JE55_RS17320 IPR020846 Major facilitator superfamily domain JE55_RS17325 IPR000873 AMP-dependent synthetase/ligase JE55_RS17325 IPR020845 AMP-binding, conserved site JE55_RS17325 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17330 IPR021945 Protein of unknown function DUF3562 JE55_RS17340 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JE55_RS17340 IPR004090 Chemotaxis methyl-accepting receptor JE55_RS17340 IPR024478 4HB MCP domain JE55_RS17345 IPR002545 CheW-like protein JE55_RS17350 IPR000620 Drug/metabolite transporter JE55_RS17355 IPR003313 AraC-type arabinose-binding/dimerisation domain JE55_RS17355 IPR009057 Homeodomain-like JE55_RS17355 IPR018060 DNA binding HTH domain, AraC-type JE55_RS17355 IPR018062 HTH domain AraC-type, conserved site JE55_RS17360 IPR001702 Porin, Gram-negative type JE55_RS17360 IPR023614 Porin domain JE55_RS17370 IPR001031 Thioesterase JE55_RS17370 IPR009081 Acyl carrier protein-like JE55_RS17370 IPR020802 Polyketide synthase, thioesterase domain JE55_RS17370 IPR020806 Polyketide synthase, phosphopantetheine-binding domain JE55_RS17370 IPR029058 Alpha/Beta hydrolase fold JE55_RS17375 IPR005153 MbtH-like protein JE55_RS17380 IPR003347 JmjC domain JE55_RS17385 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site JE55_RS17385 IPR004839 Aminotransferase, class I/classII JE55_RS17385 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS17385 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS17385 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS17390 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17390 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS17395 IPR002376 Formyl transferase, N-terminal JE55_RS17400 IPR001518 Argininosuccinate synthase JE55_RS17400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS17400 IPR018223 Argininosuccinate synthase, conserved site JE55_RS17400 IPR023434 Argininosuccinate synthase, type 1 subfamily JE55_RS17400 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body JE55_RS17405 IPR000362 Fumarate lyase family JE55_RS17405 IPR008948 L-Aspartase-like JE55_RS17405 IPR009049 Argininosuccinate lyase JE55_RS17405 IPR020557 Fumarate lyase, conserved site JE55_RS17405 IPR022761 Fumarate lyase, N-terminal JE55_RS17405 IPR024083 Fumarase/histidase, N-terminal JE55_RS17405 IPR029419 Argininosuccinate lyase, C-terminal JE55_RS17415 IPR011701 Major facilitator superfamily JE55_RS17415 IPR020846 Major facilitator superfamily domain JE55_RS17425 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS17430 IPR000362 Fumarate lyase family JE55_RS17430 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain JE55_RS17430 IPR008948 L-Aspartase-like JE55_RS17430 IPR009049 Argininosuccinate lyase JE55_RS17430 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS17430 IPR020557 Fumarate lyase, conserved site JE55_RS17430 IPR022761 Fumarate lyase, N-terminal JE55_RS17435 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase JE55_RS17435 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS17435 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS17435 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS17435 IPR023603 Threonine aldolase JE55_RS17440 IPR000182 GNAT domain JE55_RS17440 IPR016181 Acyl-CoA N-acyltransferase JE55_RS17445 IPR000873 AMP-dependent synthetase/ligase JE55_RS17445 IPR001242 Condensation domain JE55_RS17445 IPR006162 Phosphopantetheine attachment site JE55_RS17445 IPR009081 Acyl carrier protein-like JE55_RS17445 IPR010071 Amino acid adenylation domain JE55_RS17445 IPR020806 Polyketide synthase, phosphopantetheine-binding domain JE55_RS17445 IPR020845 AMP-binding, conserved site JE55_RS17445 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17450 IPR003696 Carbamoyltransferase JE55_RS17450 IPR031730 JE55_RS17450 JE55_RS17455 IPR002692 Penicillin amidase-like JE55_RS17455 IPR014395 Penicillin/cephalosporin acylase JE55_RS17455 IPR023343 Penicillin amidase type, domain1 JE55_RS17455 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS17465 IPR021225 Protein of unknown function DUF2778 JE55_RS17470 IPR018740 Protein of unknown function DUF2282, integral membrane JE55_RS17475 IPR007801 Uncharacterised protein family UPF0276 JE55_RS17475 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS17480 IPR018640 Protein of unknown function DUF2063 JE55_RS17485 IPR032808 JE55_RS17485 JE55_RS17490 IPR009495 Protein of unknown function DUF1109 JE55_RS17495 IPR009495 Protein of unknown function DUF1109 JE55_RS17500 IPR007627 RNA polymerase sigma-70 region 2 JE55_RS17500 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17500 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JE55_RS17500 IPR013324 RNA polymerase sigma factor, region 3/4 JE55_RS17500 IPR013325 RNA polymerase sigma factor, region 2 JE55_RS17500 IPR014284 RNA polymerase sigma-70 like domain JE55_RS17505 IPR001207 Transposase, mutator type JE55_RS17515 IPR008878 Transposase IS66, Orf2 JE55_RS17520 IPR001584 Integrase, catalytic core JE55_RS17520 IPR012337 Ribonuclease H-like domain JE55_RS17520 IPR025948 HTH-like domain JE55_RS17525 IPR002514 Transposase IS3/IS911family JE55_RS17525 IPR009057 Homeodomain-like JE55_RS17540 IPR021847 Protein of unknown function DUF3443 JE55_RS17545 IPR021267 Protein of unknown function DUF2844 JE55_RS17550 IPR025161 Putative transposase IS4/IS5 family JE55_RS17555 IPR001789 Signal transduction response regulator, receiver domain JE55_RS17555 IPR001867 Signal transduction response regulator, C-terminal JE55_RS17555 IPR011006 CheY-like superfamily JE55_RS17555 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17555 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS17560 IPR002891 Adenylylsulphate kinase JE55_RS17560 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17570 IPR002201 Glycosyl transferase, family 9 JE55_RS17570 IPR011990 Tetratricopeptide-like helical domain JE55_RS17575 IPR002201 Glycosyl transferase, family 9 JE55_RS17575 IPR011990 Tetratricopeptide-like helical domain JE55_RS17575 IPR013216 Methyltransferase type 11 JE55_RS17575 IPR019734 Tetratricopeptide repeat JE55_RS17575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS17580 IPR003997 RTX secretion protein D, Gram-negative bacteria JE55_RS17580 IPR006144 Secretion protein HlyD, conserved site JE55_RS17580 IPR010129 Type I secretion membrane fusion protein, HlyD JE55_RS17585 IPR003439 ABC transporter-like JE55_RS17585 IPR003593 AAA+ ATPase domain JE55_RS17585 IPR011527 ABC transporter type 1, transmembrane domain JE55_RS17585 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17590 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17600 IPR013519 Integrin alpha beta-propellor JE55_RS17600 IPR018511 Hemolysin-type calcium-binding conserved site JE55_RS17600 IPR022038 Bacterial Ig-like domain JE55_RS17605 IPR003423 Outer membrane efflux protein JE55_RS17610 IPR006664 Outer membrane protein, bacterial JE55_RS17610 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal JE55_RS17610 IPR007450 Lipoprotein SmpA/OmlA JE55_RS17615 IPR001801 Histone-like protein H-NS JE55_RS17615 IPR027444 Histone-like protein H-NS, C-terminal domain JE55_RS17625 IPR001702 Porin, Gram-negative type JE55_RS17625 IPR002299 Porin, Neisseria sp. type JE55_RS17625 IPR023614 Porin domain JE55_RS17630 IPR010102 Succinate semialdehyde dehydrogenase JE55_RS17630 IPR015590 Aldehyde dehydrogenase domain JE55_RS17630 IPR016160 Aldehyde dehydrogenase, cysteine active site JE55_RS17630 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS17630 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS17630 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS17630 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JE55_RS17635 IPR000524 Transcription regulator HTH, GntR JE55_RS17635 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS17635 IPR011711 GntR, C-terminal JE55_RS17635 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17640 IPR003439 ABC transporter-like JE55_RS17640 IPR003593 AAA+ ATPase domain JE55_RS17640 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS17640 IPR013611 Transport-associated OB, type 2 JE55_RS17640 IPR017871 ABC transporter, conserved site JE55_RS17640 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17645 IPR000515 MetI-like domain JE55_RS17650 IPR000515 MetI-like domain JE55_RS17660 IPR011008 Dimeric alpha-beta barrel JE55_RS17660 IPR012577 NIPSNAP JE55_RS17665 IPR015590 Aldehyde dehydrogenase domain JE55_RS17665 IPR016160 Aldehyde dehydrogenase, cysteine active site JE55_RS17665 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS17665 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS17665 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS17665 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JE55_RS17670 IPR011251 Luciferase-like domain JE55_RS17675 IPR002563 Flavin reductase-like, FMN-binding JE55_RS17675 IPR012349 FMN-binding split barrel JE55_RS17680 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS17680 IPR029058 Alpha/Beta hydrolase fold JE55_RS17685 IPR009569 Amino acid synthesis, putative JE55_RS17690 IPR002514 Transposase IS3/IS911family JE55_RS17690 IPR009057 Homeodomain-like JE55_RS17700 IPR000524 Transcription regulator HTH, GntR JE55_RS17700 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS17700 IPR011711 GntR, C-terminal JE55_RS17700 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17710 IPR001207 Transposase, mutator type JE55_RS17715 IPR001207 Transposase, mutator type JE55_RS17725 IPR001801 Histone-like protein H-NS JE55_RS17725 IPR027444 Histone-like protein H-NS, C-terminal domain JE55_RS17735 IPR001633 EAL domain JE55_RS17740 IPR001789 Signal transduction response regulator, receiver domain JE55_RS17740 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS17740 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS17740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JE55_RS17740 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JE55_RS17740 IPR011006 CheY-like superfamily JE55_RS17745 IPR000792 Transcription regulator LuxR, C-terminal JE55_RS17745 IPR001789 Signal transduction response regulator, receiver domain JE55_RS17745 IPR011006 CheY-like superfamily JE55_RS17745 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17745 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS17760 IPR005594 YadA-like, C-terminal JE55_RS17785 IPR000259 Fimbrial-type adhesion domain JE55_RS17785 IPR008966 Adhesion domain JE55_RS17790 IPR000015 Outer membrane usher protein JE55_RS17790 IPR018030 Fimbrial membrane usher, conserved site JE55_RS17790 IPR025885 PapC, N-terminal domain JE55_RS17790 IPR025949 PapC-like, C-terminal domain JE55_RS17795 IPR001829 Pili assembly chaperone, bacterial JE55_RS17795 IPR008962 PapD-like JE55_RS17795 IPR016147 PapD, N-terminal, bacterial JE55_RS17795 IPR016148 Pili assembly chaperone, C-terminal domain JE55_RS17800 IPR000259 Fimbrial-type adhesion domain JE55_RS17800 IPR008966 Adhesion domain JE55_RS17810 IPR000014 PAS domain JE55_RS17810 IPR013978 MEKHLA JE55_RS17820 IPR010126 Esterase, PHB depolymerase JE55_RS17820 IPR029058 Alpha/Beta hydrolase fold JE55_RS17850 IPR006905 Tryptophan halogenase JE55_RS17850 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS17855 IPR006153 Cation/H+ exchanger JE55_RS17860 IPR017941 Rieske [2Fe-2S] iron-sulphur domain JE55_RS17875 IPR004006 Dak kinase JE55_RS17875 IPR004007 DhaL domain JE55_RS17885 IPR003660 HAMP linker domain JE55_RS17885 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JE55_RS17885 IPR004090 Chemotaxis methyl-accepting receptor JE55_RS17890 IPR000412 ABC-2 transporter JE55_RS17890 IPR013525 ABC-2 type transporter JE55_RS17895 IPR003439 ABC transporter-like JE55_RS17895 IPR003593 AAA+ ATPase domain JE55_RS17895 IPR017871 ABC transporter, conserved site JE55_RS17895 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17900 IPR003374 ApbE-like domain JE55_RS17900 IPR024932 Flavin transferase ApbE JE55_RS17910 IPR002429 Cytochrome c oxidase subunit II C-terminal JE55_RS17910 IPR008972 Cupredoxin JE55_RS17910 IPR011045 Nitrous oxide reductase, N-terminal JE55_RS17910 IPR015943 WD40/YVTN repeat-like-containing domain JE55_RS17910 IPR023644 Nitrous-oxide reductase JE55_RS17915 IPR006626 Parallel beta-helix repeat JE55_RS17915 IPR006633 Carbohydrate-binding/sugar hydrolysis domain JE55_RS17915 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain JE55_RS17915 IPR011050 Pectin lyase fold/virulence factor JE55_RS17915 IPR012334 Pectin lyase fold JE55_RS17915 IPR022441 Parallel beta-helix repeat-2 JE55_RS17915 IPR026464 Nitrous oxide reductase family maturation protein NosD JE55_RS17920 IPR003439 ABC transporter-like JE55_RS17920 IPR003593 AAA+ ATPase domain JE55_RS17920 IPR017871 ABC transporter, conserved site JE55_RS17920 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17925 IPR032688 JE55_RS17925 JE55_RS17930 IPR008719 Nitrous oxide reductase accessory protein NosL JE55_RS17945 IPR002323 Cytochrome c, class IE JE55_RS17945 IPR009056 Cytochrome c-like domain JE55_RS17950 IPR007329 FMN-binding JE55_RS17950 IPR011399 Nitrous oxide reductase expression regulator NosR JE55_RS17950 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS17950 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS17955 IPR006685 Mechanosensitive ion channel MscS JE55_RS17955 IPR010920 Like-Sm (LSM) domain JE55_RS17955 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 JE55_RS17955 IPR011066 Mechanosensitive ion channel MscS, C-terminal JE55_RS17955 IPR022249 Protein of unknown function DUF3772 JE55_RS17980 IPR005545 YCII-related JE55_RS17980 IPR011008 Dimeric alpha-beta barrel JE55_RS17985 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB JE55_RS17985 IPR004488 Magnesium/cobalt transport protein CorA JE55_RS17990 IPR011724 Cyd operon protein YbgT JE55_RS17990 IPR012994 Membrane bound YbgT-like JE55_RS17995 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18005 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase JE55_RS18005 IPR016040 NAD(P)-binding domain JE55_RS18005 IPR032095 JE55_RS18005 JE55_RS18020 IPR000485 AsnC-type HTH domain JE55_RS18020 IPR011008 Dimeric alpha-beta barrel JE55_RS18020 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS18020 IPR019887 Transcription regulator AsnC-type, C-terminal JE55_RS18020 IPR019888 Transcription regulator AsnC-type JE55_RS18035 IPR012899 LTXXQ motif family protein JE55_RS18040 IPR010126 Esterase, PHB depolymerase JE55_RS18040 IPR029058 Alpha/Beta hydrolase fold JE55_RS18045 IPR025688 PGDYG protein JE55_RS18055 IPR021389 Protein of unknown function DUF3022 JE55_RS18060 IPR011397 Uncharacterised conserved protein UCP033101 JE55_RS18065 IPR000843 Transcription regulator HTH, LacI JE55_RS18065 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS18065 IPR028082 Periplasmic binding protein-like I JE55_RS18070 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JE55_RS18070 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JE55_RS18070 IPR016040 NAD(P)-binding domain JE55_RS18070 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JE55_RS18070 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JE55_RS18075 IPR011701 Major facilitator superfamily JE55_RS18075 IPR020846 Major facilitator superfamily domain JE55_RS18080 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JE55_RS18080 IPR011611 Carbohydrate kinase PfkB JE55_RS18080 IPR029056 Ribokinase-like JE55_RS18085 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS18090 IPR025962 SdpI/YhfL protein family JE55_RS18095 IPR000847 Transcription regulator HTH, LysR JE55_RS18095 IPR005119 LysR, substrate-binding JE55_RS18095 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS18100 IPR004630 Uncharacterised protein family UPF0324, bacteria JE55_RS18100 IPR018383 Uncharacterised protein family UPF0324, prokaryote JE55_RS18105 IPR000644 CBS domain JE55_RS18105 IPR001807 Chloride channel, voltage gated JE55_RS18105 IPR014743 Chloride channel, core JE55_RS18110 IPR001647 DNA-binding HTH domain, TetR-type JE55_RS18110 IPR009057 Homeodomain-like JE55_RS18110 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS18110 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal JE55_RS18115 IPR006143 RND efflux pump, membrane fusion protein JE55_RS18115 IPR032317 JE55_RS18115 JE55_RS18120 IPR001036 Acriflavin resistance protein JE55_RS18120 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS18125 IPR003423 Outer membrane efflux protein JE55_RS18125 IPR010131 RND efflux system, outer membrane lipoprotein, NodT JE55_RS18135 IPR000551 MerR-type HTH domain JE55_RS18135 IPR009061 DNA binding domain, putative JE55_RS18145 IPR001387 Cro/C1-type helix-turn-helix domain JE55_RS18145 IPR010982 Lambda repressor-like, DNA-binding domain JE55_RS18150 IPR021354 Protein of unknown function DUF2975 JE55_RS18155 IPR000014 PAS domain JE55_RS18155 IPR002078 RNA polymerase sigma factor 54 interaction domain JE55_RS18155 IPR003593 AAA+ ATPase domain JE55_RS18155 IPR009057 Homeodomain-like JE55_RS18155 IPR013656 PAS fold-4 JE55_RS18155 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JE55_RS18155 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS18155 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS18155 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18160 IPR001279 Beta-lactamase-like JE55_RS18165 IPR005939 Beta-lactamase hydrolase-like JE55_RS18165 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS18165 IPR029021 Protein-tyrosine phosphatase-like JE55_RS18170 IPR002781 Transmembrane protein TauE like JE55_RS18175 IPR000515 MetI-like domain JE55_RS18180 IPR000515 MetI-like domain JE55_RS18185 IPR003439 ABC transporter-like JE55_RS18185 IPR003593 AAA+ ATPase domain JE55_RS18185 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit JE55_RS18185 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS18185 IPR013611 Transport-associated OB, type 2 JE55_RS18185 IPR017871 ABC transporter, conserved site JE55_RS18185 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18190 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein JE55_RS18195 IPR001046 NRAMP family JE55_RS18200 IPR010710 Protein of unknown function DUF1289 JE55_RS18205 IPR005618 Outer membrane protein, OmpW JE55_RS18205 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel JE55_RS18210 IPR004136 2-nitropropane dioxygenase, NPD JE55_RS18210 IPR013785 Aldolase-type TIM barrel JE55_RS18215 IPR015590 Aldehyde dehydrogenase domain JE55_RS18215 IPR016161 Aldehyde/histidinol dehydrogenase JE55_RS18215 IPR016162 Aldehyde dehydrogenase, N-terminal JE55_RS18215 IPR016163 Aldehyde dehydrogenase, C-terminal JE55_RS18215 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JE55_RS18225 IPR003439 ABC transporter-like JE55_RS18225 IPR003593 AAA+ ATPase domain JE55_RS18225 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18225 IPR032781 JE55_RS18225 JE55_RS18235 IPR007844 AsmA JE55_RS18240 IPR003439 ABC transporter-like JE55_RS18240 IPR003593 AAA+ ATPase domain JE55_RS18240 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18245 IPR005226 UPF0014 family JE55_RS18370 IPR003855 K+ potassium transporter JE55_RS18480 IPR021029 DNA polymerase III, tau subunit, domain V JE55_RS18555 IPR003593 AAA+ ATPase domain JE55_RS18555 IPR003959 ATPase, AAA-type, core JE55_RS18555 IPR018368 ClpA/B, conserved site 1 JE55_RS18555 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18575 IPR001453 Molybdopterin binding domain JE55_RS18575 IPR005110 MoeA, N-terminal and linker domain JE55_RS18575 IPR005111 MoeA, C-terminal, domain IV JE55_RS18575 IPR008284 Molybdenum cofactor biosynthesis, conserved site JE55_RS18765 IPR001753 Crotonase superfamily JE55_RS18765 IPR029045 ClpP/crotonase-like domain JE55_RS18795 IPR029062 Class I glutamine amidotransferase-like JE55_RS18810 IPR016188 PurM, N-terminal-like JE55_RS19185 IPR002125 CMP/dCMP deaminase, zinc-binding JE55_RS19185 IPR016192 APOBEC/CMP deaminase, zinc-binding JE55_RS19185 IPR016193 Cytidine deaminase-like JE55_RS19265 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding JE55_RS19265 IPR008279 PEP-utilising enzyme, mobile domain JE55_RS19265 IPR013815 ATP-grasp fold, subdomain 1 JE55_RS19265 IPR013816 ATP-grasp fold, subdomain 2 JE55_RS19265 IPR018274 PEP-utilising enzyme, active site JE55_RS19330 IPR010827 Surface antigen variable number JE55_RS19395 IPR004150 NAD-dependent DNA ligase, OB-fold JE55_RS19395 IPR012340 Nucleic acid-binding, OB-fold JE55_RS19395 IPR013839 NAD-dependent DNA ligase, adenylation JE55_RS19395 IPR013840 NAD-dependent DNA ligase, N-terminal JE55_RS19395 IPR033136 JE55_RS19395 JE55_RS19485 IPR011701 Major facilitator superfamily JE55_RS19485 IPR020846 Major facilitator superfamily domain JE55_RS19505 IPR015003 Protein of unknown function DUF1853 JE55_RS19525 IPR006254 Isocitrate lyase JE55_RS19525 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain JE55_RS19525 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site JE55_RS19700 IPR000192 Aminotransferase class V domain JE55_RS19700 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS19700 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS19760 IPR000873 AMP-dependent synthetase/ligase JE55_RS19760 IPR020845 AMP-binding, conserved site JE55_RS19770 IPR001242 Condensation domain JE55_RS19800 IPR000873 AMP-dependent synthetase/ligase JE55_RS19825 IPR001036 Acriflavin resistance protein JE55_RS19825 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS19880 IPR015262 Lysidine-tRNA(Ile) synthetase, substrate-binding domain JE55_RS20065 IPR007936 Virulence-associated E JE55_RS20345 IPR000014 PAS domain JE55_RS20345 IPR001610 PAC motif JE55_RS20345 IPR013767 PAS fold JE55_RS20375 IPR001567 Peptidase M3A/M3B JE55_RS20375 IPR024079 Metallopeptidase, catalytic domain JE55_RS20460 IPR002078 RNA polymerase sigma factor 54 interaction domain JE55_RS20460 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS20460 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS20460 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS20540 IPR006089 Acyl-CoA dehydrogenase, conserved site JE55_RS20540 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JE55_RS20540 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JE55_RS20540 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain JE55_RS20570 IPR006680 Amidohydrolase 1 JE55_RS20570 IPR010252 Formiminoglutamate deiminase JE55_RS20570 IPR032466 JE55_RS20570 JE55_RS20575 IPR006680 Amidohydrolase 1 JE55_RS20575 IPR010252 Formiminoglutamate deiminase JE55_RS20575 IPR032466 JE55_RS20575 JE55_RS20700 IPR001539 Peptidase U32 JE55_RS20760 IPR000825 SUF system FeS cluster assembly, SufBD JE55_RS20840 IPR000515 MetI-like domain JE55_RS20840 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family JE55_RS20895 IPR006076 FAD dependent oxidoreductase JE55_RS20895 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS21265 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal JE55_RS21265 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JE55_RS21265 IPR016039 Thiolase-like JE55_RS21295 IPR006439 HAD hydrolase, subfamily IA JE55_RS21295 IPR023214 HAD-like domain JE55_RS21405 IPR000362 Fumarate lyase family JE55_RS21405 IPR008948 L-Aspartase-like JE55_RS21405 IPR022761 Fumarate lyase, N-terminal JE55_RS21405 IPR024083 Fumarase/histidase, N-terminal JE55_RS21550 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain JE55_RS21750 IPR002938 Monooxygenase, FAD-binding JE55_RS21750 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain JE55_RS21775 IPR011697 Peptidase C26 JE55_RS21875 IPR000305 GIY-YIG nuclease superfamily JE55_RS21935 IPR005828 General substrate transporter JE55_RS21935 IPR020846 Major facilitator superfamily domain JE55_RS22050 IPR003836 Glucokinase JE55_RS22155 IPR003824 Undecaprenyl-diphosphatase UppP JE55_RS22315 IPR001173 Glycosyltransferase 2-like JE55_RS22315 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS22500 IPR002577 Helix-turn-helix, HxlR type JE55_RS22500 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS22565 IPR000847 Transcription regulator HTH, LysR JE55_RS22565 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS22695 IPR001279 Beta-lactamase-like JE55_RS22700 IPR001633 EAL domain JE55_RS22740 IPR001085 Serine hydroxymethyltransferase JE55_RS22740 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS22740 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS22845 IPR004839 Aminotransferase, class I/classII JE55_RS22845 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 JE55_RS22845 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS22855 IPR013968 Polyketide synthase, KR JE55_RS22855 IPR016040 NAD(P)-binding domain JE55_RS22965 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal JE55_RS22965 IPR005835 Nucleotidyl transferase JE55_RS22965 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS23015 IPR016188 PurM, N-terminal-like JE55_RS23120 IPR004604 DNA recombination/repair protein RecN JE55_RS23120 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS23125 IPR004604 DNA recombination/repair protein RecN JE55_RS23125 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS23160 IPR025263 Domain of unknown function DUF3971 JE55_RS23175 IPR002510 TldD/PmbA JE55_RS23265 IPR008773 Phosphonate metabolism protein PhnI JE55_RS23310 IPR012340 Nucleic acid-binding, OB-fold JE55_RS23310 IPR033454 JE55_RS23310 JE55_RS23355 IPR007498 Paraquat-inducible protein A JE55_RS23375 IPR000241 Putative RNA methylase domain JE55_RS23375 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JE55_RS23375 IPR004114 THUMP JE55_RS23375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like JE55_RS23795 IPR001264 Glycosyl transferase, family 51 JE55_RS23795 IPR023346 Lysozyme-like domain JE55_RS23870 IPR000788 Ribonucleotide reductase large subunit, C-terminal JE55_RS23950 IPR010751 TrfA JE55_RS24135 IPR004101 Mur ligase, C-terminal JE55_RS24135 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase JE55_RS24135 IPR013221 Mur ligase, central JE55_RS24245 IPR007963 Peptidase M61, catalytic domain JE55_RS24425 IPR003439 ABC transporter-like JE55_RS24425 IPR011527 ABC transporter type 1, transmembrane domain JE55_RS24425 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS24465 IPR017748 Type VI secretion system-associated, BMAA0400 JE55_RS24605 IPR014059 Conjugative relaxase, N-terminal JE55_RS24605 IPR014862 TrwC relaxase JE55_RS24605 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS24665 IPR005797 Cytochrome b/b6, N-terminal JE55_RS24665 IPR016174 Di-haem cytochrome, transmembrane JE55_RS24665 IPR027387 Cytochrome b/b6-like domain JE55_RS24865 IPR000183 Ornithine/DAP/Arg decarboxylase JE55_RS24865 IPR002986 Diaminopimelate decarboxylase, LysA JE55_RS24865 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal JE55_RS24865 IPR029066 PLP-binding barrel JE55_RS24900 IPR008168 Cytochrome c, class IC JE55_RS24900 IPR009056 Cytochrome c-like domain JE55_RS25035 IPR007066 RNA polymerase Rpb1, domain 3 JE55_RS25035 IPR007081 RNA polymerase Rpb1, domain 5 JE55_RS25035 IPR007083 RNA polymerase Rpb1, domain 4 JE55_RS25050 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 JE55_RS25050 IPR007121 RNA polymerase, beta subunit, conserved site JE55_RS25050 IPR014724 RNA polymerase Rpb2, OB-fold JE55_RS25050 IPR015712 DNA-directed RNA polymerase, subunit 2 JE55_RS25055 IPR007642 RNA polymerase Rpb2, domain 2 JE55_RS25055 IPR007644 RNA polymerase, beta subunit, protrusion JE55_RS25055 IPR007645 RNA polymerase Rpb2, domain 3 JE55_RS25055 IPR015712 DNA-directed RNA polymerase, subunit 2 JE55_RS25055 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain JE55_RS25160 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain JE55_RS25160 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JE55_RS25160 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain JE55_RS25160 IPR029061 Thiamin diphosphate-binding fold JE55_RS26025 IPR013727 Two-component sensor kinase N-terminal JE55_RS26030 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain JE55_RS26275 IPR003313 AraC-type arabinose-binding/dimerisation domain JE55_RS26275 IPR009057 Homeodomain-like JE55_RS26275 IPR014710 RmlC-like jelly roll fold JE55_RS26275 IPR018060 DNA binding HTH domain, AraC-type JE55_RS26275 IPR020449 Transcription regulator HTH, AraC- type JE55_RS26315 IPR012963 Protein of unknown function DUF1700 JE55_RS26355 IPR001753 Crotonase superfamily JE55_RS26355 IPR016040 NAD(P)-binding domain JE55_RS26355 IPR029045 ClpP/crotonase-like domain JE55_RS26405 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase JE55_RS26405 IPR016174 Di-haem cytochrome, transmembrane JE55_RS26490 IPR000182 GNAT domain JE55_RS26490 IPR016181 Acyl-CoA N-acyltransferase JE55_RS26535 IPR005119 LysR, substrate-binding JE55_RS26535 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS26665 IPR005311 Penicillin-binding protein, dimerisation domain JE55_RS26695 IPR004808 AP endonuclease 1 JE55_RS26695 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS26930 IPR008622 Flagellar protein FliT JE55_RS27020 IPR003439 ABC transporter-like JE55_RS27020 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS27030 IPR002816 Pheromone shutdown, TraB JE55_RS27035 IPR010374 Protein of unknown function DUF969 JE55_RS27050 IPR003778 Allophanate hydrolase subunit 2 JE55_RS27130 IPR001782 Flagellar P-ring protein JE55_RS27170 IPR006043 Xanthine/uracil/vitamin C permease JE55_RS27210 IPR001046 NRAMP family JE55_RS27350 IPR016040 NAD(P)-binding domain JE55_RS27430 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS27430 IPR029058 Alpha/Beta hydrolase fold JE55_RS27550 IPR029058 Alpha/Beta hydrolase fold JE55_RS27580 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain JE55_RS27580 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain JE55_RS27595 IPR006153 Cation/H+ exchanger JE55_RS27595 IPR018422 Cation/H+ exchanger, CPA1 family JE55_RS27620 IPR001952 Alkaline phosphatase JE55_RS27620 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha JE55_RS27620 IPR017850 Alkaline-phosphatase-like, core domain JE55_RS27750 IPR004223 Vitamin B12-dependent methionine synthase, activation domain JE55_RS27750 IPR006158 Cobalamin (vitamin B12)-binding domain JE55_RS27820 IPR006146 5'-Nucleotidase, conserved site JE55_RS27820 IPR006179 5'-Nucleotidase/apyrase JE55_RS27820 IPR029052 Metallo-dependent phosphatase-like JE55_RS28065 IPR002994 Surfeit locus 1/Shy1 JE55_RS28080 IPR003782 Copper chaperone SCO1/SenC JE55_RS28080 IPR012336 Thioredoxin-like fold JE55_RS28120 IPR001851 ABC transporter, permease JE55_RS28130 IPR003439 ABC transporter-like JE55_RS28130 IPR003593 AAA+ ATPase domain JE55_RS28130 IPR017871 ABC transporter, conserved site JE55_RS28130 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS28155 IPR029460 DNA polymerase, helix-hairpin-helix motif JE55_RS28185 IPR003819 Taurine catabolism dioxygenase TauD/TfdA JE55_RS28210 IPR016039 Thiolase-like JE55_RS28290 IPR003148 Regulator of K+ conductance, N-terminal JE55_RS28290 IPR006037 Regulator of K+ conductance, C-terminal JE55_RS28290 IPR016040 NAD(P)-binding domain JE55_RS28515 IPR000160 GGDEF domain JE55_RS28515 IPR029787 Nucleotide cyclase JE55_RS28555 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal JE55_RS28555 IPR005835 Nucleotidyl transferase JE55_RS28555 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase JE55_RS28555 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS28595 IPR029058 Alpha/Beta hydrolase fold JE55_RS28700 IPR000281 Helix-turn-helix protein RpiR JE55_RS28700 IPR001347 Sugar isomerase (SIS) JE55_RS28700 IPR009057 Homeodomain-like JE55_RS28700 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS28840 IPR007543 Organic solvent tolerance protein, C-terminal JE55_RS28845 IPR007543 Organic solvent tolerance protein, C-terminal JE55_RS29010 IPR018483 Carbohydrate kinase, FGGY, conserved site JE55_RS29010 IPR018484 Carbohydrate kinase, FGGY, N-terminal JE55_RS29010 IPR018485 Carbohydrate kinase, FGGY, C-terminal JE55_RS29060 IPR015213 Cholesterol oxidase, substrate-binding JE55_RS29060 IPR016164 FAD-linked oxidase-like, C-terminal JE55_RS29060 IPR016166 FAD-binding, type 2 JE55_RS29060 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 JE55_RS29060 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain JE55_RS29075 IPR001763 Rhodanese-like domain JE55_RS29075 IPR017582 tRNA 2-selenouridine synthase JE55_RS29075 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS29105 IPR007815 Erythromycin esterase JE55_RS29135 IPR001264 Glycosyl transferase, family 51 JE55_RS29135 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS29135 IPR023346 Lysozyme-like domain JE55_RS29210 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS29300 IPR001915 Peptidase M48 JE55_RS29335 IPR001576 Phosphoglycerate kinase JE55_RS29335 IPR015824 Phosphoglycerate kinase, N-terminal JE55_RS29335 IPR015911 Phosphoglycerate kinase, conserved site JE55_RS29355 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain JE55_RS29430 IPR003423 Outer membrane efflux protein JE55_RS29430 IPR010131 RND efflux system, outer membrane lipoprotein, NodT JE55_RS29500 IPR000515 MetI-like domain JE55_RS29665 IPR002347 Glucose/ribitol dehydrogenase JE55_RS29665 IPR016040 NAD(P)-binding domain JE55_RS29715 IPR009305 Protein of unknown function DUF962 JE55_RS29920 IPR003439 ABC transporter-like JE55_RS29920 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS29920 IPR032823 JE55_RS29920 JE55_RS29925 IPR003439 ABC transporter-like JE55_RS29925 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS30140 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS30140 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS30145 IPR003190 Aspartate decarboxylase JE55_RS30145 IPR009010 Aspartate decarboxylase-like domain JE55_RS30160 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA JE55_RS30200 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding JE55_RS30200 IPR012340 Nucleic acid-binding, OB-fold JE55_RS30210 IPR027367 YMGG-like Gly-zipper JE55_RS30230 IPR000310 Orn/Lys/Arg decarboxylase, major domain JE55_RS30230 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal JE55_RS30230 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 JE55_RS30230 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS30400 IPR025961 Heavy-metal resistance protein JE55_RS30445 IPR001830 Glycosyl transferase, family 20 JE55_RS30565 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS30565 IPR029058 Alpha/Beta hydrolase fold JE55_RS30635 IPR000160 GGDEF domain JE55_RS30635 IPR001633 EAL domain JE55_RS30635 IPR029787 Nucleotide cyclase JE55_RS30760 IPR011045 Nitrous oxide reductase, N-terminal JE55_RS30760 IPR015943 WD40/YVTN repeat-like-containing domain JE55_RS30760 IPR019405 Lactonase, 7-bladed beta propeller JE55_RS30865 IPR002201 Glycosyl transferase, family 9 JE55_RS30925 IPR004963 Protein notum homologue JE55_RS30925 IPR029058 Alpha/Beta hydrolase fold JE55_RS31125 IPR003838 Permease FtsX-like JE55_RS31205 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JE55_RS31205 IPR029061 Thiamin diphosphate-binding fold JE55_RS31410 IPR000834 Peptidase M14, carboxypeptidase A JE55_RS31420 IPR000792 Transcription regulator LuxR, C-terminal JE55_RS31420 IPR010518 Flagellar regulatory FleQ JE55_RS31420 IPR011006 CheY-like superfamily JE55_RS31420 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS31420 IPR016032 Signal transduction response regulator, C-terminal effector JE55_RS31565 IPR001036 Acriflavin resistance protein JE55_RS31570 IPR001036 Acriflavin resistance protein JE55_RS31570 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS31580 IPR001036 Acriflavin resistance protein JE55_RS31580 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS31635 IPR000515 MetI-like domain JE55_RS31650 IPR002293 Amino acid/polyamine transporter I JE55_RS31650 IPR004840 Amino acid permease, conserved site JE55_RS31650 IPR004841 Amino acid permease/ SLC12A domain JE55_RS31705 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS31720 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS31870 IPR005829 Sugar transporter, conserved site JE55_RS31870 IPR011701 Major facilitator superfamily JE55_RS31870 IPR020846 Major facilitator superfamily domain JE55_RS32150 IPR006048 Alpha-amylase, C-terminal all beta JE55_RS32150 IPR013780 Glycosyl hydrolase, family 13, all-beta JE55_RS32150 IPR013781 Glycoside hydrolase, catalytic domain JE55_RS32150 IPR015902 Glycoside hydrolase, family 13 JE55_RS32150 IPR017853 Glycoside hydrolase, superfamily JE55_RS32165 IPR011009 Protein kinase-like domain JE55_RS32165 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain JE55_RS32195 IPR020136 Transcriptional repressor KorC JE55_RS32205 IPR010751 TrfA JE55_RS32250 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS32250 IPR022310 NAD/GMP synthase