JE55_RS13635 38664be6f69f02140c7d6c72723df65d 499 Pfam PF10067 Predicted membrane protein (DUF2306) 100 242 2.2E-14 T 22-04-2016 IPR018750 Protein of unknown function DUF2306, membrane JE55_RS03590 44437f488e86604ba1c179005260bb86 107 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 1.5E-38 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 JE55_RS03590 44437f488e86604ba1c179005260bb86 107 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 28.661 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 JE55_RS03590 44437f488e86604ba1c179005260bb86 107 PANTHER PTHR33175 1 91 8.9E-41 T 22-04-2016 JE55_RS03590 44437f488e86604ba1c179005260bb86 107 Gene3D G3DSA:4.10.520.10 1 92 2.2E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 JE55_RS03590 44437f488e86604ba1c179005260bb86 107 SMART SM00411 1 91 2.5E-39 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS03590 44437f488e86604ba1c179005260bb86 107 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.3E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS03590 44437f488e86604ba1c179005260bb86 107 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS03590 44437f488e86604ba1c179005260bb86 107 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS03590 44437f488e86604ba1c179005260bb86 107 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.9E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS03590 44437f488e86604ba1c179005260bb86 107 PANTHER PTHR33175:SF5 1 91 8.9E-41 T 22-04-2016 JE55_RS03590 44437f488e86604ba1c179005260bb86 107 SUPERFAMILY SSF47729 1 93 4.86E-30 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 Gene3D G3DSA:3.40.50.300 3 228 2.4E-129 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 Gene3D G3DSA:3.40.50.300 372 419 2.4E-129 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 PANTHER PTHR30612 5 523 0.0 T 22-04-2016 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 PANTHER PTHR30612 560 931 0.0 T 22-04-2016 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 842 20.178 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 SUPERFAMILY SSF81886 907 919 2.49E-82 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 SUPERFAMILY SSF81886 632 850 2.49E-82 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 SUPERFAMILY SSF81767 227 371 1.31E-44 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 827 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 PRINTS PR00906 SecA protein signature 379 396 2.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 PRINTS PR00906 SecA protein signature 416 429 2.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 PRINTS PR00906 SecA protein signature 170 190 2.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 PRINTS PR00906 SecA protein signature 342 364 2.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 PRINTS PR00906 SecA protein signature 101 115 2.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 PRINTS PR00906 SecA protein signature 63 87 2.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 PRINTS PR00906 SecA protein signature 117 127 2.9E-70 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 Gene3D G3DSA:3.90.1440.10 230 371 7.4E-46 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 SUPERFAMILY SSF52540 420 628 7.99E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 Pfam PF01043 SecA preprotein cross-linking domain 233 361 8.4E-38 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 Pfam PF07517 SecA DEAD-like domain 6 405 5.0E-133 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 SMART SM00957 6 405 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 Gene3D G3DSA:1.10.3060.10 658 841 2.2E-59 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 Pfam PF07516 SecA Wing and Scaffold domain 627 840 7.5E-66 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 SUPERFAMILY SSF52540 371 418 2.51E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 SUPERFAMILY SSF52540 5 228 2.51E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 SMART SM00958 228 361 7.2E-82 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 Gene3D G3DSA:3.40.50.300 421 629 1.8E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 ProSitePatterns PS01312 SecA family signature. 503 518 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 JE55_RS06250 e07847a724261c163b25e7cc543964a1 931 Pfam PF02810 SEC-C motif 911 929 1.8E-10 T 22-04-2016 IPR004027 SEC-C motif JE55_RS00055 a7ef12d6064ea8577a0200ebb81a63b7 278 Gene3D G3DSA:3.60.140.10 9 276 2.1E-94 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase JE55_RS00055 a7ef12d6064ea8577a0200ebb81a63b7 278 SUPERFAMILY SSF64438 4 276 3.3E-78 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic JE55_RS00055 a7ef12d6064ea8577a0200ebb81a63b7 278 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 53 276 8.3E-56 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase JE55_RS00055 a7ef12d6064ea8577a0200ebb81a63b7 278 PANTHER PTHR30616 13 278 2.2E-103 T 22-04-2016 JE55_RS00055 a7ef12d6064ea8577a0200ebb81a63b7 278 PANTHER PTHR30616:SF3 13 278 2.2E-103 T 22-04-2016 JE55_RS00055 a7ef12d6064ea8577a0200ebb81a63b7 278 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 28 275 8.0E-74 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase JE55_RS00270 acc29ebe829de7397633d47d811ed508 87 SUPERFAMILY SSF143800 1 79 1.69E-22 T 22-04-2016 JE55_RS00270 acc29ebe829de7397633d47d811ed508 87 PANTHER PTHR33280:SF2 1 80 1.4E-29 T 22-04-2016 JE55_RS00270 acc29ebe829de7397633d47d811ed508 87 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 6.4E-23 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00270 acc29ebe829de7397633d47d811ed508 87 Pfam PF01197 Ribosomal protein L31 1 78 4.2E-31 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00270 acc29ebe829de7397633d47d811ed508 87 PRINTS PR01249 Ribosomal protein L31 signature 59 77 4.4E-17 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00270 acc29ebe829de7397633d47d811ed508 87 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.4E-17 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00270 acc29ebe829de7397633d47d811ed508 87 PRINTS PR01249 Ribosomal protein L31 signature 44 59 4.4E-17 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00270 acc29ebe829de7397633d47d811ed508 87 PANTHER PTHR33280 1 80 1.4E-29 T 22-04-2016 JE55_RS00270 acc29ebe829de7397633d47d811ed508 87 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 23.977 T 22-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS14870 7e8465ba8006a28d7db197eb4cdb81be 398 Pfam PF07690 Major Facilitator Superfamily 21 359 4.6E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS14870 7e8465ba8006a28d7db197eb4cdb81be 398 SUPERFAMILY SSF103473 8 392 4.97E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS14870 7e8465ba8006a28d7db197eb4cdb81be 398 PANTHER PTHR23501 16 393 2.2E-115 T 22-04-2016 JE55_RS14870 7e8465ba8006a28d7db197eb4cdb81be 398 Gene3D G3DSA:1.20.1250.20 228 391 6.8E-15 T 22-04-2016 JE55_RS14870 7e8465ba8006a28d7db197eb4cdb81be 398 Gene3D G3DSA:1.20.1250.20 19 198 3.8E-18 T 22-04-2016 JE55_RS14870 7e8465ba8006a28d7db197eb4cdb81be 398 PANTHER PTHR23501:SF79 16 393 2.2E-115 T 22-04-2016 JE55_RS03665 b9c4e47c5a7896255a7890a721f9a211 521 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 439 450 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 JE55_RS03665 b9c4e47c5a7896255a7890a721f9a211 521 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 428 509 5.9E-31 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 JE55_RS03665 b9c4e47c5a7896255a7890a721f9a211 521 PANTHER PTHR11780:SF0 2 508 1.0E-219 T 22-04-2016 JE55_RS03665 b9c4e47c5a7896255a7890a721f9a211 521 SUPERFAMILY SSF142984 340 421 8.76E-21 T 22-04-2016 JE55_RS03665 b9c4e47c5a7896255a7890a721f9a211 521 SUPERFAMILY SSF52833 3 87 9.39E-6 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS03665 b9c4e47c5a7896255a7890a721f9a211 521 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 147 316 4.3E-45 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain JE55_RS03665 b9c4e47c5a7896255a7890a721f9a211 521 SUPERFAMILY SSF142019 97 337 8.63E-82 T 22-04-2016 JE55_RS03665 b9c4e47c5a7896255a7890a721f9a211 521 SUPERFAMILY SSF140490 424 508 4.58E-27 T 22-04-2016 JE55_RS03665 b9c4e47c5a7896255a7890a721f9a211 521 PANTHER PTHR11780 2 508 1.0E-219 T 22-04-2016 JE55_RS03665 b9c4e47c5a7896255a7890a721f9a211 521 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 264 279 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 JE55_RS03665 b9c4e47c5a7896255a7890a721f9a211 521 SMART SM00928 426 471 2.0E-17 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 Gene3D G3DSA:3.40.50.300 178 360 1.3E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 Gene3D G3DSA:3.40.50.300 3 172 1.8E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 PANTHER PTHR11649 1 437 9.6E-143 T 22-04-2016 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 PIRSF PIRSF006485 1 443 8.9E-171 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 435 6.8E-172 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 Pfam PF01926 50S ribosome-binding GTPase 5 120 2.9E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 Pfam PF01926 50S ribosome-binding GTPase 181 299 5.2E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 3.3E-19 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 341 4.3E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 SUPERFAMILY SSF52540 138 442 1.54E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 PANTHER PTHR11649:SF5 1 437 9.6E-143 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 SUPERFAMILY SSF52540 4 168 5.28E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 Gene3D G3DSA:3.30.300.20 361 437 2.0E-25 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 2.1E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.1E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 Hamap MF_00195 GTPase Der [der]. 2 438 38.091 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 435 2.2E-25 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 SMART SM00382 1 140 3.3 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS00135 7c948f9c03d943c0495d649bcc642aa9 445 SMART SM00382 178 321 0.31 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 1.2E-23 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 PIRSF PIRSF036684 1 756 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 SUPERFAMILY SSF51735 163 452 2.77E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 SUPERFAMILY SSF53223 10 161 4.53E-52 T 22-04-2016 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 Gene3D G3DSA:3.40.50.10750 568 725 3.4E-50 T 22-04-2016 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 SMART SM01274 18 151 2.5E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 Pfam PF01515 Phosphate acetyl/butaryl transferase 429 750 6.9E-94 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 SUPERFAMILY SSF53659 429 753 2.47E-86 T 22-04-2016 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 SMART SM00919 163 400 4.0E-143 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 Gene3D G3DSA:3.40.50.720 161 448 4.2E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 PANTHER PTHR23406 372 419 4.5E-168 T 22-04-2016 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 PANTHER PTHR23406 34 354 4.5E-168 T 22-04-2016 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 PRINTS PR00072 Malic enzyme signature 80 102 5.2E-5 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 PRINTS PR00072 Malic enzyme signature 190 206 5.2E-5 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 PRINTS PR00072 Malic enzyme signature 159 175 5.2E-5 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 1.1E-26 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JE55_RS07580 d1b9b6e0fa0735ec0746f52b78d14c6a 756 Gene3D G3DSA:3.40.50.10380 7 160 1.4E-51 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JE55_RS11080 fa4b65ba3f951a20424075322538d005 208 Pfam PF03602 Conserved hypothetical protein 95 25 202 1.3E-46 T 22-04-2016 JE55_RS11080 fa4b65ba3f951a20424075322538d005 208 PIRSF PIRSF004553 24 206 2.3E-41 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS11080 fa4b65ba3f951a20424075322538d005 208 Gene3D G3DSA:3.40.50.150 19 206 5.5E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS11080 fa4b65ba3f951a20424075322538d005 208 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 24 205 7.9E-40 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS11080 fa4b65ba3f951a20424075322538d005 208 PANTHER PTHR18895 25 208 9.6E-37 T 22-04-2016 JE55_RS11080 fa4b65ba3f951a20424075322538d005 208 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 138 144 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JE55_RS11080 fa4b65ba3f951a20424075322538d005 208 PANTHER PTHR18895:SF60 25 208 9.6E-37 T 22-04-2016 JE55_RS11080 fa4b65ba3f951a20424075322538d005 208 SUPERFAMILY SSF53335 25 203 5.03E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS29335 56bbe1a8d1a9d5e666f4290f838a7576 374 Pfam PF00162 Phosphoglycerate kinase 207 373 1.7E-55 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS29335 56bbe1a8d1a9d5e666f4290f838a7576 374 PRINTS PR00477 Phosphoglycerate kinase family signature 209 225 9.4E-34 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS29335 56bbe1a8d1a9d5e666f4290f838a7576 374 PRINTS PR00477 Phosphoglycerate kinase family signature 333 355 9.4E-34 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS29335 56bbe1a8d1a9d5e666f4290f838a7576 374 PRINTS PR00477 Phosphoglycerate kinase family signature 231 253 9.4E-34 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS29335 56bbe1a8d1a9d5e666f4290f838a7576 374 PRINTS PR00477 Phosphoglycerate kinase family signature 364 374 9.4E-34 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS29335 56bbe1a8d1a9d5e666f4290f838a7576 374 PRINTS PR00477 Phosphoglycerate kinase family signature 305 320 9.4E-34 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS29335 56bbe1a8d1a9d5e666f4290f838a7576 374 SUPERFAMILY SSF53748 206 373 4.83E-53 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS29335 56bbe1a8d1a9d5e666f4290f838a7576 374 Gene3D G3DSA:3.40.50.1260 205 373 1.7E-62 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS29335 56bbe1a8d1a9d5e666f4290f838a7576 374 PANTHER PTHR11406 146 374 1.5E-81 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS29335 56bbe1a8d1a9d5e666f4290f838a7576 374 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 214 224 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 PANTHER PTHR30115 1 112 2.2E-69 T 22-04-2016 JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 Gene3D G3DSA:3.30.70.120 1 112 8.4E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.8E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 SUPERFAMILY SSF54913 1 112 2.57E-45 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 PANTHER PTHR30115:SF12 1 112 2.2E-69 T 22-04-2016 JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 SMART SM00938 4 105 4.3E-67 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 PRINTS PR00340 P-II protein signature 23 41 7.5E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 PRINTS PR00340 P-II protein signature 83 103 7.5E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 PRINTS PR00340 P-II protein signature 2 17 7.5E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 PRINTS PR00340 P-II protein signature 52 75 7.5E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS10645 64e98e32a9196bb3315e2edeb6a7d074 112 PIRSF PIRSF039144 1 112 1.5E-53 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS05590 fd00b3c44acbc1b593e91d346cca7f75 152 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 150 32.169 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 JE55_RS05590 fd00b3c44acbc1b593e91d346cca7f75 152 Gene3D G3DSA:3.50.80.10 1 149 8.3E-50 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain JE55_RS05590 fd00b3c44acbc1b593e91d346cca7f75 152 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 150 6.9E-51 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 JE55_RS05590 fd00b3c44acbc1b593e91d346cca7f75 152 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 148 4.4E-47 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 JE55_RS05590 fd00b3c44acbc1b593e91d346cca7f75 152 SUPERFAMILY SSF69500 1 149 1.83E-49 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain JE55_RS05590 fd00b3c44acbc1b593e91d346cca7f75 152 PANTHER PTHR10472 2 152 3.2E-58 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 JE55_RS17645 0d3184285acb4fcd6be3960dd79c15f6 264 PANTHER PTHR30193 12 264 1.8E-65 T 22-04-2016 JE55_RS17645 0d3184285acb4fcd6be3960dd79c15f6 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 262 6.3E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17645 0d3184285acb4fcd6be3960dd79c15f6 264 SUPERFAMILY SSF161098 12 262 5.42E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17645 0d3184285acb4fcd6be3960dd79c15f6 264 Gene3D G3DSA:1.10.3720.10 14 262 5.5E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17645 0d3184285acb4fcd6be3960dd79c15f6 264 PANTHER PTHR30193:SF20 12 264 1.8E-65 T 22-04-2016 JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 Gene3D G3DSA:3.40.50.300 13 34 1.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 Gene3D G3DSA:3.40.50.300 103 215 1.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 PANTHER PTHR23117 21 221 7.0E-83 T 22-04-2016 JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 Hamap MF_00328 Guanylate kinase [gmk]. 19 202 34.658 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 21 199 8.3E-72 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 ProSitePatterns PS00856 Guanylate kinase-like signature. 55 72 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 Pfam PF00625 Guanylate kinase 23 199 1.8E-46 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 Gene3D G3DSA:3.30.63.10 61 102 6.7E-26 T 22-04-2016 JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 PANTHER PTHR23117:SF13 21 221 7.0E-83 T 22-04-2016 JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 SMART SM00072 20 202 7.8E-53 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 Gene3D G3DSA:3.40.50.300 35 60 9.0E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03870 9e34d16e3f37a920b75b324268124598 227 SUPERFAMILY SSF52540 20 204 3.35E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05515 636ba39ddb2193e430b1b3761bc2ac4e 383 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 360 4.0E-131 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 JE55_RS05515 636ba39ddb2193e430b1b3761bc2ac4e 383 Pfam PF03054 tRNA methyl transferase 5 360 2.1E-132 T 22-04-2016 JE55_RS05515 636ba39ddb2193e430b1b3761bc2ac4e 383 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 361 38.94 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 JE55_RS05515 636ba39ddb2193e430b1b3761bc2ac4e 383 Gene3D G3DSA:2.30.30.280 210 278 1.3E-32 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 JE55_RS05515 636ba39ddb2193e430b1b3761bc2ac4e 383 PANTHER PTHR11933:SF10 1 363 8.2E-184 T 22-04-2016 JE55_RS05515 636ba39ddb2193e430b1b3761bc2ac4e 383 Gene3D G3DSA:2.40.30.10 279 364 4.9E-31 T 22-04-2016 JE55_RS05515 636ba39ddb2193e430b1b3761bc2ac4e 383 Gene3D G3DSA:3.40.50.620 2 208 1.4E-94 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS05515 636ba39ddb2193e430b1b3761bc2ac4e 383 SUPERFAMILY SSF52402 2 241 3.75E-55 T 22-04-2016 JE55_RS05515 636ba39ddb2193e430b1b3761bc2ac4e 383 PANTHER PTHR11933 1 363 8.2E-184 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 JE55_RS09600 28e254c9eb3dee1e9beef322cedf9dc7 279 SMART SM00387 168 265 7.8E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09600 28e254c9eb3dee1e9beef322cedf9dc7 279 Gene3D G3DSA:3.30.565.10 174 257 1.9E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09600 28e254c9eb3dee1e9beef322cedf9dc7 279 Pfam PF07730 Histidine kinase 62 128 1.0E-9 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 JE55_RS09600 28e254c9eb3dee1e9beef322cedf9dc7 279 SUPERFAMILY SSF55874 170 259 1.31E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09600 28e254c9eb3dee1e9beef322cedf9dc7 279 PANTHER PTHR24421 35 274 3.9E-33 T 22-04-2016 JE55_RS09600 28e254c9eb3dee1e9beef322cedf9dc7 279 PANTHER PTHR24421:SF1 35 274 3.9E-33 T 22-04-2016 JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 SMART SM00052 531 783 6.3E-66 T 22-04-2016 IPR001633 EAL domain JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 354 519 2.3E-31 T 22-04-2016 IPR000160 GGDEF domain JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 Pfam PF00990 Diguanylate cyclase, GGDEF domain 359 515 1.3E-32 T 22-04-2016 IPR000160 GGDEF domain JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 SUPERFAMILY SSF55073 363 521 3.92E-39 T 22-04-2016 IPR029787 Nucleotide cyclase JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 PANTHER PTHR33121 537 780 7.7E-62 T 22-04-2016 JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 PANTHER PTHR33121:SF10 537 780 7.7E-62 T 22-04-2016 JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 Gene3D G3DSA:3.30.450.20 197 323 4.9E-9 T 22-04-2016 JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 SMART SM00267 347 519 3.4E-50 T 22-04-2016 IPR000160 GGDEF domain JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 SUPERFAMILY SSF141868 538 783 2.09E-68 T 22-04-2016 IPR001633 EAL domain JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 Gene3D G3DSA:3.20.20.450 535 783 1.0E-77 T 22-04-2016 IPR001633 EAL domain JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 SUPERFAMILY SSF55785 197 256 1.5E-7 T 22-04-2016 IPR000014 PAS domain JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 Gene3D G3DSA:3.30.70.270 359 523 2.5E-45 T 22-04-2016 JE55_RS11375 500a03bf1796b9b7fcb23d20fc6d162e 787 Pfam PF00563 EAL domain 538 778 3.0E-60 T 22-04-2016 IPR001633 EAL domain JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 153 1.9E-24 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 SUPERFAMILY SSF51735 160 333 1.1E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 PANTHER PTHR11695:SF560 128 368 9.0E-195 T 22-04-2016 JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 PANTHER PTHR11695:SF560 15 108 9.0E-195 T 22-04-2016 JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 Pfam PF00107 Zinc-binding dehydrogenase 197 319 7.3E-25 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 367 1.1E-189 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 PANTHER PTHR11695 128 368 9.0E-195 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 PANTHER PTHR11695 15 108 9.0E-195 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 SUPERFAMILY SSF50129 318 368 6.59E-13 T 22-04-2016 IPR011032 GroES-like JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 SMART SM00829 12 366 3.9E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 SUPERFAMILY SSF50129 1 185 4.11E-71 T 22-04-2016 IPR011032 GroES-like JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 Gene3D G3DSA:3.90.180.10 1 189 1.9E-64 T 22-04-2016 IPR011032 GroES-like JE55_RS12395 273f37a66d6110b979fa1cda14997f9d 368 Gene3D G3DSA:3.40.50.720 190 306 4.0E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 SUPERFAMILY SSF56281 588 833 1.97E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 Pfam PF03772 Competence protein 247 566 4.5E-60 T 22-04-2016 IPR004477 ComEC/Rec2-related protein JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 Pfam PF13567 Domain of unknown function (DUF4131) 24 204 1.2E-24 T 22-04-2016 IPR025405 Domain of unknown function DUF4131 JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 SMART SM00849 601 798 3.4E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 268 394 1.8E-17 T 22-04-2016 IPR004477 ComEC/Rec2-related protein JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 PANTHER PTHR30619:SF2 77 399 1.2E-147 T 22-04-2016 JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 PANTHER PTHR30619:SF2 440 852 1.2E-147 T 22-04-2016 JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 Gene3D G3DSA:3.60.15.10 591 820 1.1E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 PANTHER PTHR30619 77 399 1.2E-147 T 22-04-2016 JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 PANTHER PTHR30619 440 852 1.2E-147 T 22-04-2016 JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 Pfam PF00753 Metallo-beta-lactamase superfamily 598 792 7.1E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS02095 44e0094fb9911ed3d8bd402b4430f907 856 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 450 827 2.2E-59 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 JE55_RS01505 cbc6faf70955ba5b841dd646263305f9 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 58 2.9E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS01505 cbc6faf70955ba5b841dd646263305f9 188 Gene3D G3DSA:1.10.357.10 61 174 9.6E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS01505 cbc6faf70955ba5b841dd646263305f9 188 PANTHER PTHR30055:SF59 1 178 2.6E-27 T 22-04-2016 JE55_RS01505 cbc6faf70955ba5b841dd646263305f9 188 PANTHER PTHR30055 1 178 2.6E-27 T 22-04-2016 JE55_RS01505 cbc6faf70955ba5b841dd646263305f9 188 SUPERFAMILY SSF46689 1 76 2.0E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS01505 cbc6faf70955ba5b841dd646263305f9 188 Gene3D G3DSA:1.10.10.60 3 60 8.0E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS01505 cbc6faf70955ba5b841dd646263305f9 188 SUPERFAMILY SSF48498 77 173 9.34E-23 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 Gene3D G3DSA:3.30.70.870 411 485 2.6E-39 T 22-04-2016 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 SUPERFAMILY SSF52540 6 288 1.44E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 PANTHER PTHR23115 308 698 0.0 T 22-04-2016 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 Gene3D G3DSA:2.40.30.10 310 410 2.4E-37 T 22-04-2016 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 4.3E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.3E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 4.3E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.3E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 4.3E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 Pfam PF03764 Elongation factor G, domain IV 484 604 4.5E-48 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 Gene3D G3DSA:3.40.50.300 6 293 3.4E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 SUPERFAMILY SSF54980 409 486 9.71E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.4E-64 T 22-04-2016 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 SMART SM00889 485 604 1.9E-74 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 110.416 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 SMART SM00838 606 694 6.1E-56 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 Pfam PF14492 Elongation Factor G, domain II 409 483 1.9E-35 T 22-04-2016 IPR009022 Elongation factor G, III-V domain JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 SUPERFAMILY SSF50447 271 407 3.77E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 SUPERFAMILY SSF54980 609 696 5.4E-30 T 22-04-2016 IPR009022 Elongation factor G, III-V domain JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 PANTHER PTHR23115:SF66 308 698 0.0 T 22-04-2016 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 186 3.1E-31 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 Gene3D G3DSA:3.30.230.10 489 604 5.2E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 Gene3D G3DSA:3.30.70.240 605 692 1.1E-34 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.1E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 SUPERFAMILY SSF54211 484 605 5.82E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 699 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 JE55_RS07400 8b9bbcb99801658d365bb315fb0474fd 700 Pfam PF00679 Elongation factor G C-terminus 607 693 6.1E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain JE55_RS04465 1d798d486e842689b00d194a279703cc 192 Gene3D G3DSA:3.30.70.1300 48 135 4.5E-30 T 22-04-2016 JE55_RS04465 1d798d486e842689b00d194a279703cc 192 PANTHER PTHR30327:SF1 1 192 2.6E-58 T 22-04-2016 JE55_RS04465 1d798d486e842689b00d194a279703cc 192 PANTHER PTHR30327 1 192 2.6E-58 T 22-04-2016 JE55_RS04465 1d798d486e842689b00d194a279703cc 192 Pfam PF02622 Uncharacterized ACR, COG1678 19 179 2.7E-50 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 JE55_RS04465 1d798d486e842689b00d194a279703cc 192 Gene3D G3DSA:3.40.1740.10 6 47 2.7E-34 T 22-04-2016 JE55_RS04465 1d798d486e842689b00d194a279703cc 192 Gene3D G3DSA:3.40.1740.10 136 181 2.7E-34 T 22-04-2016 JE55_RS04465 1d798d486e842689b00d194a279703cc 192 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 8 192 38.298 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 JE55_RS04465 1d798d486e842689b00d194a279703cc 192 SUPERFAMILY SSF143456 8 192 4.06E-63 T 22-04-2016 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 Pfam PF02096 60Kd inner membrane protein 367 545 7.1E-61 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR00701 60kDa inner membrane protein signature 428 451 4.43E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR00701 60kDa inner membrane protein signature 337 357 4.43E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR00701 60kDa inner membrane protein signature 176 196 4.43E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR00701 60kDa inner membrane protein signature 264 279 4.43E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR00701 60kDa inner membrane protein signature 475 497 4.43E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR00701 60kDa inner membrane protein signature 229 247 4.43E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR00701 60kDa inner membrane protein signature 89 110 4.43E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR00701 60kDa inner membrane protein signature 511 534 4.43E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR00701 60kDa inner membrane protein signature 2 23 4.43E-71 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 366 545 2.5E-71 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR01900 YidC translocation/secretion protein signature 500 524 2.29E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR01900 YidC translocation/secretion protein signature 352 368 2.29E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PRINTS PR01900 YidC translocation/secretion protein signature 481 496 2.29E-25 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 Pfam PF14849 YidC periplasmic domain 84 356 6.0E-82 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 547 24.523 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 365 6.4E-110 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PANTHER PTHR12428 183 545 5.2E-100 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 JE55_RS09005 200c128fe6928e35e38f2ded4710b31c 557 PANTHER PTHR12428:SF14 183 545 5.2E-100 T 22-04-2016 JE55_RS03750 c34aab1f8ea30641e54212e9e912365a 764 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 757 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 JE55_RS03750 c34aab1f8ea30641e54212e9e912365a 764 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 430 752 6.1E-144 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 JE55_RS03750 c34aab1f8ea30641e54212e9e912365a 764 PANTHER PTHR30519 1 762 0.0 T 22-04-2016 JE55_RS03750 c34aab1f8ea30641e54212e9e912365a 764 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 757 36.272 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 JE55_RS03750 c34aab1f8ea30641e54212e9e912365a 764 SUPERFAMILY SSF51726 395 756 5.62E-117 T 22-04-2016 JE55_RS03750 c34aab1f8ea30641e54212e9e912365a 764 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 313 3.3E-117 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 JE55_RS03750 c34aab1f8ea30641e54212e9e912365a 764 Gene3D G3DSA:3.20.20.210 3 388 4.9E-143 T 22-04-2016 JE55_RS03750 c34aab1f8ea30641e54212e9e912365a 764 SUPERFAMILY SSF51726 4 393 5.36E-108 T 22-04-2016 JE55_RS03750 c34aab1f8ea30641e54212e9e912365a 764 PIRSF PIRSF000382 1 762 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 JE55_RS03750 c34aab1f8ea30641e54212e9e912365a 764 PANTHER PTHR30519:SF0 1 762 0.0 T 22-04-2016 JE55_RS03750 c34aab1f8ea30641e54212e9e912365a 764 Gene3D G3DSA:3.20.20.210 391 758 5.5E-125 T 22-04-2016 JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 Gene3D G3DSA:1.10.40.30 418 463 1.6E-33 T 22-04-2016 JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 PANTHER PTHR11444:SF1 1 464 1.6E-255 T 22-04-2016 JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 SUPERFAMILY SSF48557 6 464 8.8E-160 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 PRINTS PR00145 Argininosuccinate lyase family signature 176 196 7.3E-7 T 22-04-2016 JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 PRINTS PR00145 Argininosuccinate lyase family signature 134 156 7.3E-7 T 22-04-2016 JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 7.3E-7 T 22-04-2016 JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 Pfam PF10415 Fumarase C C-terminus 409 462 9.6E-27 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 1.6E-35 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 1.6E-35 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 1.6E-35 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 1.6E-35 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 462 3.8E-237 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 Gene3D G3DSA:1.20.200.10 140 417 3.8E-108 T 22-04-2016 JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 463 92.35 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 PANTHER PTHR11444 1 464 1.6E-255 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 Pfam PF00206 Lyase 13 343 3.6E-119 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 Gene3D G3DSA:1.10.275.10 4 139 4.5E-61 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal JE55_RS03335 bd11120a234b2809a938ce80010a3d6f 464 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 310 2.2E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 389 6.2E-16 T 22-04-2016 IPR019489 Clp ATPase, C-terminal JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 SMART SM00994 12 51 8.7E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 SUPERFAMILY SSF57716 13 48 9.98E-12 T 22-04-2016 JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 412 1.3E-206 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 SMART SM01086 317 412 1.4E-34 T 22-04-2016 IPR019489 Clp ATPase, C-terminal JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 SUPERFAMILY SSF52540 64 404 7.49E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 PANTHER PTHR11262 3 416 1.3E-246 T 22-04-2016 JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 Gene3D G3DSA:1.10.8.60 316 418 9.9E-36 T 22-04-2016 JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 Pfam PF06689 ClpX C4-type zinc finger 13 49 3.4E-20 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 PANTHER PTHR11262:SF4 3 416 1.3E-246 T 22-04-2016 JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 415 53.718 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 Gene3D G3DSA:3.40.50.300 68 255 2.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 Gene3D G3DSA:3.40.50.300 294 311 2.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00735 1c7456bbabfa29ec20259a5e132a5577 423 SMART SM00382 113 333 3.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS13935 4313510b208628152b2d3c78ca894f72 390 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 98 301 1.4E-30 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 JE55_RS13935 4313510b208628152b2d3c78ca894f72 390 Gene3D G3DSA:3.40.50.2000 179 366 1.9E-49 T 22-04-2016 JE55_RS13935 4313510b208628152b2d3c78ca894f72 390 PANTHER PTHR30160 4 376 2.3E-53 T 22-04-2016 JE55_RS13935 4313510b208628152b2d3c78ca894f72 390 PANTHER PTHR30160:SF1 4 376 2.3E-53 T 22-04-2016 JE55_RS13935 4313510b208628152b2d3c78ca894f72 390 SUPERFAMILY SSF53756 8 366 3.77E-74 T 22-04-2016 JE55_RS13935 4313510b208628152b2d3c78ca894f72 390 Gene3D G3DSA:3.40.50.2000 10 151 2.7E-32 T 22-04-2016 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 SUPERFAMILY SSF52540 1 204 2.48E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 SUPERFAMILY SSF52540 442 581 2.48E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Gene3D G3DSA:3.30.1490.20 210 258 4.2E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Gene3D G3DSA:3.30.1490.20 130 153 4.2E-30 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 951 22.37 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Gene3D G3DSA:1.20.1580.10 259 292 1.6E-49 T 22-04-2016 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Gene3D G3DSA:1.20.1580.10 91 129 1.6E-49 T 22-04-2016 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Gene3D G3DSA:1.20.1580.10 415 489 1.6E-49 T 22-04-2016 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Gene3D G3DSA:1.20.1580.10 705 831 1.2E-53 T 22-04-2016 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Gene3D G3DSA:3.40.50.300 2 51 2.9E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Gene3D G3DSA:3.40.50.300 832 951 1.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Gene3D G3DSA:3.40.50.300 620 703 1.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Gene3D G3DSA:3.40.50.300 490 609 2.9E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 Gene3D G3DSA:1.10.8.280 295 414 2.9E-43 T 22-04-2016 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 PANTHER PTHR32282:SF2 1 183 0.0 T 22-04-2016 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 PANTHER PTHR32282:SF2 200 955 0.0 T 22-04-2016 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 936 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 SUPERFAMILY SSF52540 631 924 9.13E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 PANTHER PTHR32282 1 183 0.0 T 22-04-2016 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 PANTHER PTHR32282 200 955 0.0 T 22-04-2016 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS11230 852b16094ca59b8f4d151b69e3de735b 955 ProSitePatterns PS00211 ABC transporters family signature. 841 855 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS03695 01fa15a3ba079678da46643fc020e4da 445 Pfam PF07722 Peptidase C26 212 417 1.1E-51 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 JE55_RS03695 01fa15a3ba079678da46643fc020e4da 445 PANTHER PTHR11922:SF18 251 420 5.6E-46 T 22-04-2016 JE55_RS03695 01fa15a3ba079678da46643fc020e4da 445 PANTHER PTHR11922 251 420 5.6E-46 T 22-04-2016 JE55_RS03695 01fa15a3ba079678da46643fc020e4da 445 SUPERFAMILY SSF52317 239 443 3.73E-36 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS03695 01fa15a3ba079678da46643fc020e4da 445 Gene3D G3DSA:3.40.50.880 193 441 5.3E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS03165 2fead096e5ded3f2868d32fdae3a646d 412 SUPERFAMILY SSF53901 214 411 1.23E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS03165 2fead096e5ded3f2868d32fdae3a646d 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site JE55_RS03165 2fead096e5ded3f2868d32fdae3a646d 412 Gene3D G3DSA:3.40.47.10 263 411 3.5E-61 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS03165 2fead096e5ded3f2868d32fdae3a646d 412 SUPERFAMILY SSF53901 4 252 3.4E-81 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS03165 2fead096e5ded3f2868d32fdae3a646d 412 Gene3D G3DSA:3.40.47.10 3 260 1.3E-82 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS03165 2fead096e5ded3f2868d32fdae3a646d 412 SMART SM00825 Beta-ketoacyl synthase 6 412 6.5E-16 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JE55_RS03165 2fead096e5ded3f2868d32fdae3a646d 412 PANTHER PTHR11712 3 412 2.3E-222 T 22-04-2016 JE55_RS03165 2fead096e5ded3f2868d32fdae3a646d 412 PIRSF PIRSF000447 1 412 5.7E-195 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 JE55_RS03165 2fead096e5ded3f2868d32fdae3a646d 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 410 8.4E-204 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 JE55_RS03165 2fead096e5ded3f2868d32fdae3a646d 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 3.5E-61 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal JE55_RS03165 2fead096e5ded3f2868d32fdae3a646d 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.1E-37 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal JE55_RS01600 7d003b88ce81e3232130aa930ef33a90 466 SUPERFAMILY SSF51905 2 231 2.33E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS01600 7d003b88ce81e3232130aa930ef33a90 466 PANTHER PTHR40254 3 465 3.4E-73 T 22-04-2016 JE55_RS01600 7d003b88ce81e3232130aa930ef33a90 466 Gene3D G3DSA:3.50.50.60 3 230 1.2E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS01600 7d003b88ce81e3232130aa930ef33a90 466 PANTHER PTHR40254:SF1 3 465 3.4E-73 T 22-04-2016 JE55_RS01600 7d003b88ce81e3232130aa930ef33a90 466 Gene3D G3DSA:3.50.50.60 249 386 1.4E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS01600 7d003b88ce81e3232130aa930ef33a90 466 Pfam PF13454 FAD-NAD(P)-binding 7 157 1.5E-33 T 22-04-2016 JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 251 1.9E-59 T 22-04-2016 JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.2E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 8.2E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 8.2E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 8.2E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.2E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 8.2E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 SUPERFAMILY SSF51735 2 251 2.09E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 Gene3D G3DSA:3.40.50.720 2 251 1.2E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 PANTHER PTHR24322 161 192 6.9E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 PANTHER PTHR24322 11 144 6.9E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.3E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.3E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14260 3f327dd857dcd3cd486e54836e1889b1 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.3E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 3.0E-23 T 22-04-2016 JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 SUPERFAMILY SSF74731 2 116 2.49E-50 T 22-04-2016 JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.092 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 Pfam PF00453 Ribosomal protein L20 3 109 1.2E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 PANTHER PTHR10986:SF12 2 117 1.4E-62 T 22-04-2016 JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 Gene3D G3DSA:1.10.1900.20 55 117 8.8E-31 T 22-04-2016 JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.2E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.2E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.2E-40 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 PANTHER PTHR10986 2 117 1.4E-62 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 JE55_RS16200 c3fa05de142d9a0912c5d087f7d2a589 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.6E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 PANTHER PTHR32089:SF48 151 514 1.0E-148 T 22-04-2016 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 PANTHER PTHR32089 151 514 1.0E-148 T 22-04-2016 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 SMART SM00304 211 263 2.7E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 Pfam PF00672 HAMP domain 192 258 9.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 510 4.0E-61 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 SUPERFAMILY SSF47170 44 159 1.05E-7 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 Pfam PF02203 Tar ligand binding domain homologue 3 173 3.5E-45 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 362 389 4.1E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 285 314 4.1E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 4.1E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 420 4.1E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 439 468 4.1E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 Gene3D G3DSA:1.10.287.950 279 483 2.4E-61 T 22-04-2016 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 SUPERFAMILY SSF58104 232 512 3.79E-72 T 22-04-2016 JE55_RS16805 ffeaf48406ce90a6117108cf7fd4251c 626 SMART SM00283 264 511 1.7E-88 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS01130 ab3bd8f91fc53079ab306856cdd7b9ca 388 Gene3D G3DSA:3.40.50.2000 163 292 6.5E-7 T 22-04-2016 JE55_RS01130 ab3bd8f91fc53079ab306856cdd7b9ca 388 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 378 1.9E-97 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 JE55_RS01130 ab3bd8f91fc53079ab306856cdd7b9ca 388 PANTHER PTHR30372:SF0 7 385 1.7E-105 T 22-04-2016 JE55_RS01130 ab3bd8f91fc53079ab306856cdd7b9ca 388 PANTHER PTHR30372 7 385 1.7E-105 T 22-04-2016 JE55_RS01130 ab3bd8f91fc53079ab306856cdd7b9ca 388 Pfam PF02684 Lipid-A-disaccharide synthetase 10 377 5.2E-97 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 JE55_RS01130 ab3bd8f91fc53079ab306856cdd7b9ca 388 SUPERFAMILY SSF53756 9 383 1.01E-30 T 22-04-2016 JE55_RS01130 ab3bd8f91fc53079ab306856cdd7b9ca 388 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 7 383 37.339 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 JE55_RS12085 00e166e2a468a7f1f7a4d0a1ac826151 291 Pfam PF00072 Response regulator receiver domain 161 245 9.5E-6 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS12085 00e166e2a468a7f1f7a4d0a1ac826151 291 Pfam PF08667 BetR domain 8 150 1.2E-62 T 22-04-2016 IPR013975 Transcription regulator BetR, N-terminal JE55_RS12085 00e166e2a468a7f1f7a4d0a1ac826151 291 Gene3D G3DSA:1.10.260.40 33 76 3.1E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS12085 00e166e2a468a7f1f7a4d0a1ac826151 291 SMART SM00448 159 276 0.0043 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS12085 00e166e2a468a7f1f7a4d0a1ac826151 291 SUPERFAMILY SSF47413 34 78 7.7E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS12085 00e166e2a468a7f1f7a4d0a1ac826151 291 SUPERFAMILY SSF52172 159 283 1.71E-12 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS12085 00e166e2a468a7f1f7a4d0a1ac826151 291 Gene3D G3DSA:3.40.50.2300 159 281 6.5E-12 T 22-04-2016 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 SUPERFAMILY SSF48168 160 371 3.79E-63 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 756 778 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 Gene3D G3DSA:3.20.70.20 767 812 8.5E-86 T 22-04-2016 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 Gene3D G3DSA:3.20.70.20 873 915 8.5E-86 T 22-04-2016 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 Gene3D G3DSA:3.20.70.20 288 494 8.5E-86 T 22-04-2016 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 Gene3D G3DSA:3.20.70.20 549 711 8.5E-86 T 22-04-2016 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 PRINTS PR01183 Ribonucleotide reductase large chain signature 663 685 4.0E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 PRINTS PR01183 Ribonucleotide reductase large chain signature 448 467 4.0E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 PRINTS PR01183 Ribonucleotide reductase large chain signature 691 714 4.0E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 PRINTS PR01183 Ribonucleotide reductase large chain signature 583 594 4.0E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 PRINTS PR01183 Ribonucleotide reductase large chain signature 767 794 4.0E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 PRINTS PR01183 Ribonucleotide reductase large chain signature 625 648 4.0E-44 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 SUPERFAMILY SSF51998 372 816 1.74E-179 T 22-04-2016 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 SUPERFAMILY SSF51998 847 915 1.74E-179 T 22-04-2016 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 Pfam PF02867 Ribonucleotide reductase, barrel domain 373 912 4.0E-181 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 PANTHER PTHR11573 157 926 0.0 T 22-04-2016 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 296 369 2.3E-22 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 Pfam PF03477 ATP cone domain 39 135 2.3E-18 T 22-04-2016 IPR005144 ATP-cone domain JE55_RS06050 2b1a077074aeb74fa04fa70d1076e6e6 995 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 299 915 3.5E-211 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 JE55_RS15410 bb5cbb6bbd87432499781f43c2c866cb 167 Pfam PF13503 Domain of unknown function (DUF4123) 24 144 2.8E-22 T 22-04-2016 IPR025391 Domain of unknown function DUF4123 JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 Gene3D G3DSA:2.40.50.140 368 437 7.5E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 86 727 7.7E-189 T 22-04-2016 JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 Pfam PF00912 Transglycosylase 78 250 6.7E-66 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 Pfam PF00905 Penicillin binding protein transpeptidase domain 445 687 5.6E-31 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 PANTHER PTHR32282 437 740 1.6E-237 T 22-04-2016 JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 PANTHER PTHR32282 21 331 1.6E-237 T 22-04-2016 JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 Pfam PF17092 Penicillin-binding protein OB-like domain 337 441 9.2E-23 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 SUPERFAMILY SSF56601 438 744 9.05E-118 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 SUPERFAMILY SSF56601 232 254 9.05E-118 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 SUPERFAMILY SSF56601 283 334 9.05E-118 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 Gene3D G3DSA:3.40.710.10 438 742 3.2E-126 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 Gene3D G3DSA:3.40.710.10 253 334 3.2E-126 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 SUPERFAMILY SSF53955 63 276 6.19E-79 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 Gene3D G3DSA:1.10.3810.10 77 252 1.2E-76 T 22-04-2016 JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 PANTHER PTHR32282:SF5 437 740 1.6E-237 T 22-04-2016 JE55_RS07185 bf2e5be763e7c752e28c53c531576b3c 797 PANTHER PTHR32282:SF5 21 331 1.6E-237 T 22-04-2016 JE55_RS11035 477f8dc5cddc0cf1d94959edd25d99fe 546 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 443 3.0E-214 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 JE55_RS11035 477f8dc5cddc0cf1d94959edd25d99fe 546 PANTHER PTHR10277 1 434 2.4E-240 T 22-04-2016 JE55_RS11035 477f8dc5cddc0cf1d94959edd25d99fe 546 Pfam PF00682 HMGL-like 31 311 4.0E-74 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 JE55_RS11035 477f8dc5cddc0cf1d94959edd25d99fe 546 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 JE55_RS11035 477f8dc5cddc0cf1d94959edd25d99fe 546 SUPERFAMILY SSF89000 387 436 5.1E-11 T 22-04-2016 JE55_RS11035 477f8dc5cddc0cf1d94959edd25d99fe 546 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 JE55_RS11035 477f8dc5cddc0cf1d94959edd25d99fe 546 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 537 49.542 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 JE55_RS11035 477f8dc5cddc0cf1d94959edd25d99fe 546 PANTHER PTHR10277:SF28 1 434 2.4E-240 T 22-04-2016 JE55_RS11035 477f8dc5cddc0cf1d94959edd25d99fe 546 SUPERFAMILY SSF51569 20 328 3.81E-98 T 22-04-2016 JE55_RS11035 477f8dc5cddc0cf1d94959edd25d99fe 546 Gene3D G3DSA:3.20.20.70 8 392 2.5E-143 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS06015 250625fa9ec3355e9ae19f65242d997f 300 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 290 4.3E-72 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 JE55_RS06015 250625fa9ec3355e9ae19f65242d997f 300 PANTHER PTHR18895 16 298 1.6E-82 T 22-04-2016 JE55_RS06015 250625fa9ec3355e9ae19f65242d997f 300 PIRSF PIRSF000401 1 298 2.0E-97 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 JE55_RS06015 250625fa9ec3355e9ae19f65242d997f 300 PANTHER PTHR18895:SF69 16 298 1.6E-82 T 22-04-2016 JE55_RS06015 250625fa9ec3355e9ae19f65242d997f 300 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 296 32.391 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 JE55_RS06015 250625fa9ec3355e9ae19f65242d997f 300 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 296 3.6E-91 T 22-04-2016 JE55_RS06015 250625fa9ec3355e9ae19f65242d997f 300 SUPERFAMILY SSF53335 73 277 9.22E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS06015 250625fa9ec3355e9ae19f65242d997f 300 Gene3D G3DSA:3.40.50.150 108 292 1.7E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS12490 d36f3ccc6e97a5d79dfc2b0c12b19a6d 493 SUPERFAMILY SSF53067 2 246 3.81E-72 T 22-04-2016 JE55_RS12490 d36f3ccc6e97a5d79dfc2b0c12b19a6d 493 PANTHER PTHR10196 1 493 2.7E-198 T 22-04-2016 JE55_RS12490 d36f3ccc6e97a5d79dfc2b0c12b19a6d 493 SUPERFAMILY SSF53067 245 484 2.85E-56 T 22-04-2016 JE55_RS12490 d36f3ccc6e97a5d79dfc2b0c12b19a6d 493 PANTHER PTHR10196:SF72 1 493 2.7E-198 T 22-04-2016 JE55_RS12490 d36f3ccc6e97a5d79dfc2b0c12b19a6d 493 Gene3D G3DSA:3.30.420.40 246 485 3.6E-46 T 22-04-2016 JE55_RS12490 d36f3ccc6e97a5d79dfc2b0c12b19a6d 493 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 254 439 1.5E-30 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JE55_RS12490 d36f3ccc6e97a5d79dfc2b0c12b19a6d 493 Gene3D G3DSA:3.30.420.40 1 243 3.9E-63 T 22-04-2016 JE55_RS12490 d36f3ccc6e97a5d79dfc2b0c12b19a6d 493 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 243 2.0E-67 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JE55_RS12490 d36f3ccc6e97a5d79dfc2b0c12b19a6d 493 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 128 140 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 JE55_RS12490 d36f3ccc6e97a5d79dfc2b0c12b19a6d 493 TIGRFAM TIGR01312 XylB: xylulokinase 3 478 8.8E-164 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 JE55_RS12490 d36f3ccc6e97a5d79dfc2b0c12b19a6d 493 PIRSF PIRSF000538 1 490 1.1E-126 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 JE55_RS06030 91792722281ae010d027ccb5cb610631 312 Pfam PF00294 pfkB family carbohydrate kinase 34 295 1.8E-38 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB JE55_RS06030 91792722281ae010d027ccb5cb610631 312 PANTHER PTHR10584:SF15 4 304 1.2E-90 T 22-04-2016 JE55_RS06030 91792722281ae010d027ccb5cb610631 312 PANTHER PTHR10584 4 304 1.2E-90 T 22-04-2016 JE55_RS06030 91792722281ae010d027ccb5cb610631 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JE55_RS06030 91792722281ae010d027ccb5cb610631 312 Gene3D G3DSA:3.40.1190.20 4 304 1.2E-55 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS06030 91792722281ae010d027ccb5cb610631 312 SUPERFAMILY SSF53613 4 298 1.71E-62 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 Gene3D G3DSA:1.10.10.10 4 55 3.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 PANTHER PTHR30154:SF28 3 152 4.7E-59 T 22-04-2016 JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 SUPERFAMILY SSF46785 2 62 5.74E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.2E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.2E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.2E-13 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 SMART SM00344 3 112 2.2E-43 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 SUPERFAMILY SSF54909 63 152 1.74E-22 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 PANTHER PTHR30154 3 152 4.7E-59 T 22-04-2016 JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 Pfam PF01037 Lrp/AsnC ligand binding domain 70 143 3.5E-25 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 Gene3D G3DSA:3.30.70.920 56 152 1.8E-30 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS07820 d69dffd2a21457e474b88db3f9db6386 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 5.3E-16 T 22-04-2016 JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 PANTHER PTHR32039 155 522 5.9E-213 T 22-04-2016 JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 PANTHER PTHR32039 1 132 5.9E-213 T 22-04-2016 JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 Pfam PF01078 Magnesium chelatase, subunit ChlI 216 421 1.3E-92 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 158 522 3.7E-117 T 22-04-2016 IPR004482 Mg chelatase-related protein JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 SUPERFAMILY SSF52540 216 523 7.16E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 Gene3D G3DSA:3.30.230.10 16 186 1.5E-17 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 Gene3D G3DSA:3.40.50.300 215 414 3.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 131 3.3E-41 T 22-04-2016 JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 430 522 1.1E-28 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 343 356 2.7E-6 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 235 250 2.7E-6 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 315 329 2.7E-6 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 367 379 2.7E-6 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 SUPERFAMILY SSF54211 15 191 4.17E-23 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 SMART SM00382 236 418 1.8E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 PANTHER PTHR32039:SF7 155 522 5.9E-213 T 22-04-2016 IPR004482 Mg chelatase-related protein JE55_RS10635 7a875ce723116d653e09cde7759f7f4f 528 PANTHER PTHR32039:SF7 1 132 5.9E-213 T 22-04-2016 IPR004482 Mg chelatase-related protein JE55_RS04240 db1971800265b61aad84797ee730b318 217 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 10 196 2.0E-38 T 22-04-2016 JE55_RS04240 db1971800265b61aad84797ee730b318 217 Gene3D G3DSA:3.40.50.150 10 214 5.8E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS04240 db1971800265b61aad84797ee730b318 217 PANTHER PTHR11579:SF0 1 170 6.5E-39 T 22-04-2016 JE55_RS04240 db1971800265b61aad84797ee730b318 217 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 JE55_RS04240 db1971800265b61aad84797ee730b318 217 SMART SM00650 65 214 6.4E-4 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 JE55_RS04240 db1971800265b61aad84797ee730b318 217 PANTHER PTHR11579 1 170 6.5E-39 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 JE55_RS04240 db1971800265b61aad84797ee730b318 217 SUPERFAMILY SSF53335 1 178 2.94E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 PANTHER PTHR20856 352 372 4.3E-207 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 Pfam PF04563 RNA polymerase beta subunit 64 109 4.2E-7 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 Pfam PF04561 RNA polymerase Rpb2, domain 2 3 63 2.1E-12 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 Gene3D G3DSA:2.30.150.10 201 265 1.3E-26 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 PANTHER PTHR20856 4 334 4.3E-207 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 Gene3D G3DSA:2.40.50.100 324 372 6.5E-11 T 22-04-2016 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 PANTHER PTHR20856:SF20 4 334 4.3E-207 T 22-04-2016 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 Pfam PF10385 RNA polymerase beta subunit external 1 domain 200 265 1.5E-23 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 PANTHER PTHR20856:SF20 352 372 4.3E-207 T 22-04-2016 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 SUPERFAMILY SSF64484 3 372 6.1E-133 T 22-04-2016 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 Gene3D G3DSA:3.90.1110.10 2 50 3.8E-13 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 Gene3D G3DSA:3.90.1100.10 51 200 7.1E-113 T 22-04-2016 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 Gene3D G3DSA:3.90.1100.10 268 322 7.1E-113 T 22-04-2016 JE55_RS25055 9ab93cb31fc7f1bcd312248a8d033b54 373 Pfam PF04565 RNA polymerase Rpb2, domain 3 122 189 1.8E-32 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07905 3e86683908b82cc524b6aa1ae97242d1 166 PANTHER PTHR33990 5 166 4.2E-69 T 22-04-2016 JE55_RS07905 3e86683908b82cc524b6aa1ae97242d1 166 SUPERFAMILY SSF54593 7 164 2.1E-49 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS07905 3e86683908b82cc524b6aa1ae97242d1 166 PIRSF PIRSF021700 3 166 2.3E-61 T 22-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase JE55_RS07905 3e86683908b82cc524b6aa1ae97242d1 166 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 126 2.3E-46 T 22-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase JE55_RS07905 3e86683908b82cc524b6aa1ae97242d1 166 Gene3D G3DSA:3.10.180.10 6 138 1.8E-48 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS07905 3e86683908b82cc524b6aa1ae97242d1 166 PANTHER PTHR33990:SF2 5 166 4.2E-69 T 22-04-2016 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 Pfam PF09334 tRNA synthetases class I (M) 20 413 3.7E-145 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 Pfam PF01588 Putative tRNA binding domain 625 722 5.5E-23 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 SUPERFAMILY SSF52374 17 153 3.52E-95 T 22-04-2016 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 SUPERFAMILY SSF52374 188 404 3.52E-95 T 22-04-2016 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 PANTHER PTHR11946:SF86 15 676 1.2E-212 T 22-04-2016 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 Gene3D G3DSA:3.40.50.620 18 156 3.6E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 Gene3D G3DSA:3.40.50.620 195 396 3.6E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 27 38 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 SUPERFAMILY SSF57770 154 188 4.58E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 Gene3D G3DSA:2.40.50.140 613 725 2.9E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 SUPERFAMILY SSF50249 618 724 2.69E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 Gene3D G3DSA:1.10.730.10 397 553 5.2E-39 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 PRINTS PR01041 Methionyl-tRNA synthetase signature 102 113 1.5E-23 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 PRINTS PR01041 Methionyl-tRNA synthetase signature 54 68 1.5E-23 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 PRINTS PR01041 Methionyl-tRNA synthetase signature 22 35 1.5E-23 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 PRINTS PR01041 Methionyl-tRNA synthetase signature 268 279 1.5E-23 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 PRINTS PR01041 Methionyl-tRNA synthetase signature 401 412 1.5E-23 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 PRINTS PR01041 Methionyl-tRNA synthetase signature 307 322 1.5E-23 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 Gene3D G3DSA:2.20.28.20 157 188 3.2E-18 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 SUPERFAMILY SSF47323 610 633 2.43E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 SUPERFAMILY SSF47323 403 578 2.43E-38 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 594 725 5.2E-40 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 PANTHER PTHR11946 15 676 1.2E-212 T 22-04-2016 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 Hamap MF_00098 Methionine--tRNA ligase [metG]. 18 564 39.229 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 JE55_RS13280 28373c5e7573d4bc44ee99d308f7baaa 725 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 20 528 2.9E-158 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 JE55_RS00130 89fd369ad21aca237e2d71d200e8be05 79 PANTHER PTHR34772:SF1 2 79 2.6E-36 T 22-04-2016 JE55_RS00130 89fd369ad21aca237e2d71d200e8be05 79 SUPERFAMILY SSF50182 8 71 1.53E-23 T 22-04-2016 IPR010920 LSM domain JE55_RS00130 89fd369ad21aca237e2d71d200e8be05 79 PANTHER PTHR34772 2 79 2.6E-36 T 22-04-2016 JE55_RS00130 89fd369ad21aca237e2d71d200e8be05 79 Gene3D G3DSA:2.30.30.100 2 71 3.7E-37 T 22-04-2016 JE55_RS00130 89fd369ad21aca237e2d71d200e8be05 79 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 27.79 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 JE55_RS00130 89fd369ad21aca237e2d71d200e8be05 79 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 8 65 1.1E-28 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 Pfam PF01256 Carbohydrate kinase 267 493 4.1E-52 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 SUPERFAMILY SSF53613 241 517 5.11E-65 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 SUPERFAMILY SSF64153 26 264 2.75E-54 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 27 234 20.374 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 39 228 3.1E-26 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 Gene3D G3DSA:3.40.50.10260 26 249 1.5E-62 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 249 514 5.9E-60 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 PIRSF PIRSF017184 26 521 1.4E-106 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 PANTHER PTHR12592:SF0 16 523 3.4E-106 T 22-04-2016 JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 PANTHER PTHR12592 16 523 3.4E-106 T 22-04-2016 JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 Gene3D G3DSA:3.40.1190.20 250 517 2.1E-78 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 243 515 22.365 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 JE55_RS00670 c9191853f6266fef4e4bbe8bfb575122 531 Pfam PF03853 YjeF-related protein N-terminus 47 211 1.5E-40 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 JE55_RS06955 2f62fbc74d3edb41de72f470a6f8d8ea 121 PANTHER PTHR23089 4 115 1.3E-42 T 22-04-2016 IPR001310 Histidine triad (HIT) protein JE55_RS06955 2f62fbc74d3edb41de72f470a6f8d8ea 121 Pfam PF01230 HIT domain 15 113 1.8E-25 T 22-04-2016 IPR001310 Histidine triad (HIT) protein JE55_RS06955 2f62fbc74d3edb41de72f470a6f8d8ea 121 PRINTS PR00332 Histidine triad family signature 101 111 5.3E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein JE55_RS06955 2f62fbc74d3edb41de72f470a6f8d8ea 121 PRINTS PR00332 Histidine triad family signature 29 47 5.3E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein JE55_RS06955 2f62fbc74d3edb41de72f470a6f8d8ea 121 PRINTS PR00332 Histidine triad family signature 8 24 5.3E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein JE55_RS06955 2f62fbc74d3edb41de72f470a6f8d8ea 121 SUPERFAMILY SSF54197 1 115 6.5E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 JE55_RS06955 2f62fbc74d3edb41de72f470a6f8d8ea 121 Gene3D G3DSA:3.30.428.10 2 115 1.2E-38 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 JE55_RS05420 fc41db53c40dfe5b0276a2df21e6489f 192 SMART SM00867 26 190 2.4E-62 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JE55_RS05420 fc41db53c40dfe5b0276a2df21e6489f 192 PANTHER PTHR34406:SF1 6 192 1.5E-37 T 22-04-2016 JE55_RS05420 fc41db53c40dfe5b0276a2df21e6489f 192 Gene3D G3DSA:2.40.128.110 24 192 1.2E-48 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JE55_RS05420 fc41db53c40dfe5b0276a2df21e6489f 192 SUPERFAMILY SSF101874 23 192 7.32E-46 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JE55_RS05420 fc41db53c40dfe5b0276a2df21e6489f 192 PANTHER PTHR34406 6 192 1.5E-37 T 22-04-2016 JE55_RS05420 fc41db53c40dfe5b0276a2df21e6489f 192 Pfam PF04264 YceI-like domain 27 178 3.0E-34 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JE55_RS01695 7394d827901308d1d0433076e9f5c336 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 JE55_RS01695 7394d827901308d1d0433076e9f5c336 163 PANTHER PTHR11071 1 163 1.2E-71 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 JE55_RS01695 7394d827901308d1d0433076e9f5c336 163 SUPERFAMILY SSF50891 1 162 9.06E-58 T 22-04-2016 IPR029000 Cyclophilin-like domain JE55_RS01695 7394d827901308d1d0433076e9f5c336 163 PIRSF PIRSF001467 1 163 2.5E-26 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 JE55_RS01695 7394d827901308d1d0433076e9f5c336 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.7E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 JE55_RS01695 7394d827901308d1d0433076e9f5c336 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.7E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 JE55_RS01695 7394d827901308d1d0433076e9f5c336 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.7E-12 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 JE55_RS01695 7394d827901308d1d0433076e9f5c336 163 Gene3D G3DSA:2.40.100.10 2 162 2.0E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain JE55_RS01695 7394d827901308d1d0433076e9f5c336 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 160 5.8E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 JE55_RS01695 7394d827901308d1d0433076e9f5c336 163 PANTHER PTHR11071:SF192 1 163 1.2E-71 T 22-04-2016 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 Pfam PF00072 Response regulator receiver domain 4 113 2.0E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 Pfam PF00158 Sigma-54 interaction domain 138 303 7.6E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 Gene3D G3DSA:1.10.10.60 348 382 1.9E-37 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 Gene3D G3DSA:1.10.10.60 455 510 1.9E-37 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 490 510 3.5E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 473 490 3.5E-8 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 Gene3D G3DSA:3.40.50.300 134 309 2.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 SMART SM00448 2 113 4.2E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 SUPERFAMILY SSF52172 2 182 2.85E-39 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 4 389 2.5E-189 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 Pfam PF02954 Bacterial regulatory protein, Fis family 468 507 8.5E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 PANTHER PTHR32071:SF15 427 510 1.2E-213 T 22-04-2016 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 PANTHER PTHR32071:SF15 1 388 1.2E-213 T 22-04-2016 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 SMART SM00382 157 300 2.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 PANTHER PTHR32071 427 510 1.2E-213 T 22-04-2016 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 PANTHER PTHR32071 1 388 1.2E-213 T 22-04-2016 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 Gene3D G3DSA:3.40.50.2300 3 119 4.6E-32 T 22-04-2016 JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 SUPERFAMILY SSF52540 137 380 2.88E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02305 a4449bda83e50683237ad2e3220b2a83 511 SUPERFAMILY SSF46689 438 510 2.6E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS18070 8408398b9335ad734d0e2f94a8c5073f 325 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 221 237 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JE55_RS18070 8408398b9335ad734d0e2f94a8c5073f 325 Gene3D G3DSA:3.40.50.720 109 282 1.4E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS18070 8408398b9335ad734d0e2f94a8c5073f 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 282 1.7E-63 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JE55_RS18070 8408398b9335ad734d0e2f94a8c5073f 325 SUPERFAMILY SSF52283 1 128 5.86E-29 T 22-04-2016 JE55_RS18070 8408398b9335ad734d0e2f94a8c5073f 325 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 143 171 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JE55_RS18070 8408398b9335ad734d0e2f94a8c5073f 325 PANTHER PTHR10996:SF118 1 320 1.3E-135 T 22-04-2016 JE55_RS18070 8408398b9335ad734d0e2f94a8c5073f 325 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 314 5.7E-27 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 JE55_RS18070 8408398b9335ad734d0e2f94a8c5073f 325 Gene3D G3DSA:3.40.50.720 3 108 1.1E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS18070 8408398b9335ad734d0e2f94a8c5073f 325 SUPERFAMILY SSF51735 95 283 3.48E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS18070 8408398b9335ad734d0e2f94a8c5073f 325 PANTHER PTHR10996 1 320 1.3E-135 T 22-04-2016 JE55_RS12950 65e8a306981a68864b92e91c2ca8d759 316 PANTHER PTHR11795:SF371 1 315 3.6E-117 T 22-04-2016 JE55_RS12950 65e8a306981a68864b92e91c2ca8d759 316 PANTHER PTHR11795 1 315 3.6E-117 T 22-04-2016 JE55_RS12950 65e8a306981a68864b92e91c2ca8d759 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 300 1.1E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS04670 7f9b02d2259e913d4c89e165131425f7 315 PANTHER PTHR11019 57 314 3.7E-44 T 22-04-2016 JE55_RS04670 7f9b02d2259e913d4c89e165131425f7 315 Gene3D G3DSA:1.10.10.60 264 312 1.7E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS04670 7f9b02d2259e913d4c89e165131425f7 315 SUPERFAMILY SSF46689 263 312 9.41E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS04670 7f9b02d2259e913d4c89e165131425f7 315 SUPERFAMILY SSF46689 213 259 5.91E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS04670 7f9b02d2259e913d4c89e165131425f7 315 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 263 305 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JE55_RS04670 7f9b02d2259e913d4c89e165131425f7 315 PANTHER PTHR11019:SF105 57 314 3.7E-44 T 22-04-2016 JE55_RS04670 7f9b02d2259e913d4c89e165131425f7 315 SMART SM00342 226 309 8.5E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS04670 7f9b02d2259e913d4c89e165131425f7 315 Pfam PF12833 Helix-turn-helix domain 232 310 2.5E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS04670 7f9b02d2259e913d4c89e165131425f7 315 Gene3D G3DSA:1.10.10.60 208 263 4.5E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS05440 dbcb922c4b0a113255ff06e90182fbb8 218 Pfam PF04403 Paraquat-inducible protein A 45 196 1.6E-43 T 22-04-2016 IPR007498 Paraquat-inducible protein A JE55_RS05440 dbcb922c4b0a113255ff06e90182fbb8 218 PANTHER PTHR30462:SF3 1 195 5.9E-25 T 22-04-2016 JE55_RS05440 dbcb922c4b0a113255ff06e90182fbb8 218 PANTHER PTHR30462 1 195 5.9E-25 T 22-04-2016 JE55_RS06990 1223a0d25c552273e71795183c0c777a 206 PANTHER PTHR33508 1 206 3.6E-72 T 22-04-2016 JE55_RS06990 1223a0d25c552273e71795183c0c777a 206 PANTHER PTHR33508:SF1 1 206 3.6E-72 T 22-04-2016 JE55_RS06990 1223a0d25c552273e71795183c0c777a 206 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 198 3.9E-60 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JE55_RS06990 1223a0d25c552273e71795183c0c777a 206 Pfam PF01914 MarC family integral membrane protein 3 201 4.6E-60 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Gene3D G3DSA:3.30.56.20 406 479 5.8E-27 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Gene3D G3DSA:3.30.70.380 709 809 8.0E-23 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 803 46.121 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Gene3D G3DSA:3.50.40.10 206 397 7.9E-76 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 SMART SM00873 218 391 1.4E-80 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 SUPERFAMILY SSF56037 202 397 4.18E-67 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 809 4.1E-232 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Gene3D G3DSA:2.40.50.140 42 160 3.8E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Gene3D G3DSA:3.30.56.10 1 38 1.1E-24 T 22-04-2016 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Gene3D G3DSA:3.30.56.10 161 190 1.1E-24 T 22-04-2016 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Pfam PF03483 B3/4 domain 219 391 4.9E-61 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Pfam PF03484 tRNA synthetase B5 domain 410 475 3.4E-20 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 SUPERFAMILY SSF54991 704 809 1.15E-20 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 SUPERFAMILY SSF55681 471 696 1.99E-49 T 22-04-2016 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 809 1.5E-25 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 SMART SM00874 407 475 1.2E-30 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 SUPERFAMILY SSF50249 40 201 8.08E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Pfam PF01588 Putative tRNA binding domain 45 151 2.9E-25 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 SMART SM00896 707 809 1.2E-32 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 Gene3D G3DSA:3.30.930.10 494 696 3.9E-62 T 22-04-2016 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 SUPERFAMILY SSF46955 408 479 1.56E-20 T 22-04-2016 IPR009061 Putative DNA-binding domain JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 PANTHER PTHR10947 2 809 7.7E-262 T 22-04-2016 JE55_RS16210 cf0d8455bc74fe0f9d07fcbebef1c8cb 810 PANTHER PTHR10947:SF0 2 809 7.7E-262 T 22-04-2016 JE55_RS15585 ff9c387d94e63fb1d895f4ecccdd8fe1 276 SUPERFAMILY SSF53474 13 268 4.65E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS15585 ff9c387d94e63fb1d895f4ecccdd8fe1 276 Gene3D G3DSA:3.40.50.1820 33 269 4.3E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS15585 ff9c387d94e63fb1d895f4ecccdd8fe1 276 PANTHER PTHR23024:SF233 45 265 3.3E-23 T 22-04-2016 JE55_RS15585 ff9c387d94e63fb1d895f4ecccdd8fe1 276 PANTHER PTHR23024 45 265 3.3E-23 T 22-04-2016 JE55_RS15585 ff9c387d94e63fb1d895f4ecccdd8fe1 276 Pfam PF07859 alpha/beta hydrolase fold 74 251 1.6E-9 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 JE55_RS07360 f8c30e3b3093f771d1f183a7c65738d0 109 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.1E-42 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 JE55_RS07360 f8c30e3b3093f771d1f183a7c65738d0 109 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 109 24.44 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 JE55_RS07360 f8c30e3b3093f771d1f183a7c65738d0 109 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07360 f8c30e3b3093f771d1f183a7c65738d0 109 SUPERFAMILY SSF54843 1 108 3.27E-40 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 JE55_RS07360 f8c30e3b3093f771d1f183a7c65738d0 109 PANTHER PTHR13501 1 107 1.5E-45 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 JE55_RS07360 f8c30e3b3093f771d1f183a7c65738d0 109 Gene3D G3DSA:3.90.470.10 1 108 6.2E-41 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 JE55_RS07360 f8c30e3b3093f771d1f183a7c65738d0 109 Pfam PF00237 Ribosomal protein L22p/L17e 9 107 3.3E-32 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 JE55_RS17370 fac62dc9297d9eefa1c65e1d08dcf577 636 SUPERFAMILY SSF52777 49 184 5.45E-8 T 22-04-2016 JE55_RS17370 fac62dc9297d9eefa1c65e1d08dcf577 636 SUPERFAMILY SSF47336 254 323 8.51E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17370 fac62dc9297d9eefa1c65e1d08dcf577 636 SUPERFAMILY SSF53474 357 626 3.82E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17370 fac62dc9297d9eefa1c65e1d08dcf577 636 Pfam PF00550 Phosphopantetheine attachment site 259 322 9.3E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17370 fac62dc9297d9eefa1c65e1d08dcf577 636 Pfam PF00975 Thioesterase domain 378 618 1.7E-23 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 JE55_RS17370 fac62dc9297d9eefa1c65e1d08dcf577 636 Gene3D G3DSA:3.40.50.1820 566 632 5.8E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17370 fac62dc9297d9eefa1c65e1d08dcf577 636 Gene3D G3DSA:3.40.50.1820 359 481 5.8E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17370 fac62dc9297d9eefa1c65e1d08dcf577 636 SMART SM00824 Thioesterase 380 633 5.3E-5 T 22-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 JE55_RS17370 fac62dc9297d9eefa1c65e1d08dcf577 636 Gene3D G3DSA:1.10.1200.10 253 327 1.9E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17370 fac62dc9297d9eefa1c65e1d08dcf577 636 SMART SM00823 Phosphopantetheine attachment site 257 326 0.0068 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 SUPERFAMILY SSF46785 9 79 1.11E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 30 44 7.4E-10 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 44 62 7.4E-10 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 PANTHER PTHR30363:SF1 6 259 4.7E-103 T 22-04-2016 JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 SMART SM01134 78 239 1.6E-73 T 22-04-2016 JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 Gene3D G3DSA:1.10.10.10 6 61 2.4E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 ProSitePatterns PS00894 DeoR-type HTH domain signature. 12 46 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 PANTHER PTHR30363 6 259 4.7E-103 T 22-04-2016 JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 Gene3D G3DSA:3.30.750.70 79 179 2.2E-13 T 22-04-2016 JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 Pfam PF00455 DeoR C terminal sensor domain 81 238 5.8E-53 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 SUPERFAMILY SSF100950 80 239 3.77E-28 T 22-04-2016 JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 Pfam PF08220 DeoR-like helix-turn-helix domain 12 67 6.3E-19 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JE55_RS11840 87159072e31cc1dbe575367c65acdc5a 259 SMART SM00420 12 64 7.9E-21 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 Gene3D G3DSA:3.40.190.10 179 256 1.2E-24 T 22-04-2016 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 PANTHER PTHR21022 1 358 5.6E-128 T 22-04-2016 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 Gene3D G3DSA:3.40.190.10 90 178 3.7E-32 T 22-04-2016 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 Pfam PF01842 ACT domain 279 344 2.9E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 SUPERFAMILY SSF48600 8 95 3.11E-23 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 Pfam PF00800 Prephenate dehydratase 94 270 2.2E-60 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 Pfam PF01817 Chorismate mutase type II 13 90 4.8E-25 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 Gene3D G3DSA:3.30.70.260 274 359 1.2E-31 T 22-04-2016 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 TIGRFAM TIGR01807 CM_P2: chorismate mutase 9 82 8.7E-27 T 22-04-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 SMART SM00830 13 92 2.1E-31 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 Gene3D G3DSA:1.20.59.10 4 89 3.6E-25 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 PANTHER PTHR21022:SF0 1 358 5.6E-128 T 22-04-2016 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 SUPERFAMILY SSF53850 93 276 1.3E-57 T 22-04-2016 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 SUPERFAMILY SSF55021 263 358 6.34E-29 T 22-04-2016 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 PIRSF PIRSF001500 2 360 4.9E-141 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 JE55_RS03610 4ede87aab7b793ebe7389d5b0bec1fe3 360 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 306 313 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 2.6E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 271 300 2.6E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 406 2.6E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 348 375 2.6E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 Pfam PF00672 HAMP domain 178 244 1.7E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 Gene3D G3DSA:1.10.287.950 265 469 7.6E-54 T 22-04-2016 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 308 496 1.6E-50 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 PANTHER PTHR32089:SF63 141 500 6.2E-112 T 22-04-2016 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 PANTHER PTHR32089 141 500 6.2E-112 T 22-04-2016 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 SMART SM00304 196 249 3.2E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 SUPERFAMILY SSF58104 217 498 1.96E-65 T 22-04-2016 JE55_RS17885 446a1ce48f371cac37ebbb8f0abe0ad4 529 SMART SM00283 250 497 5.8E-77 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 Gene3D G3DSA:3.30.1360.30 280 416 6.4E-45 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 Gene3D G3DSA:2.40.50.140 3 109 6.6E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 PANTHER PTHR22594:SF5 374 580 2.3E-243 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 PANTHER PTHR22594:SF5 1 300 2.3E-243 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 567 2.9E-106 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 Pfam PF01336 OB-fold nucleic acid binding domain 20 103 6.7E-17 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 3 572 36.09 T 22-04-2016 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 SUPERFAMILY SSF55261 294 419 4.25E-42 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 527 541 1.3E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 1.3E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 1.3E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 PRINTS PR01042 Aspartyl-tRNA synthetase signature 483 499 1.3E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 SUPERFAMILY SSF55681 113 295 5.57E-105 T 22-04-2016 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 SUPERFAMILY SSF55681 433 594 5.57E-105 T 22-04-2016 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 591 1.4E-244 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 SUPERFAMILY SSF50249 3 107 3.24E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 Pfam PF02938 GAD domain 311 410 1.1E-25 T 22-04-2016 IPR029351 GAD domain JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 PANTHER PTHR22594 374 580 2.3E-243 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 PANTHER PTHR22594 1 300 2.3E-243 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 Gene3D G3DSA:3.30.930.10 417 594 5.4E-112 T 22-04-2016 JE55_RS11595 91cf30afd93cbbc246334e6dd43a15c5 600 Gene3D G3DSA:3.30.930.10 134 279 5.4E-112 T 22-04-2016 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 Gene3D G3DSA:3.30.70.240 401 489 5.2E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 5.5E-50 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 SMART SM00838 398 486 0.0066 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 PANTHER PTHR23115:SF175 397 595 1.9E-283 T 22-04-2016 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 PANTHER PTHR23115:SF175 2 373 1.9E-283 T 22-04-2016 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 Gene3D G3DSA:3.40.50.300 2 192 5.7E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 1.8E-51 T 22-04-2016 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 Gene3D G3DSA:3.30.70.870 291 369 9.0E-26 T 22-04-2016 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 TIGRFAM TIGR01393 lepA: elongation factor 4 3 595 1.8E-301 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 SUPERFAMILY SSF50447 165 288 4.24E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 171 2.0E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 PANTHER PTHR23115 397 595 1.9E-283 T 22-04-2016 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 PANTHER PTHR23115 2 373 1.9E-283 T 22-04-2016 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 Gene3D G3DSA:2.40.30.10 193 290 5.1E-26 T 22-04-2016 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.886 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 SUPERFAMILY SSF52540 2 205 2.12E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 Pfam PF00679 Elongation factor G C-terminus 399 483 1.5E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 SUPERFAMILY SSF54980 399 493 1.34E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 SUPERFAMILY SSF54980 292 370 5.76E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain JE55_RS03130 da2466e65574fa4242af958bb1e32490 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 8.7E-8 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 189 265 1.0E-5 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 Gene3D G3DSA:3.30.160.70 180 265 2.5E-29 T 22-04-2016 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 SUPERFAMILY SSF46689 82 131 5.82E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 269 347 1.8E-32 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 Pfam PF02805 Metal binding domain of Ada 11 75 1.7E-30 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 PANTHER PTHR10815:SF9 156 347 2.6E-71 T 22-04-2016 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 SUPERFAMILY SSF53155 186 265 5.49E-20 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 PANTHER PTHR10815 156 347 2.6E-71 T 22-04-2016 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 SUPERFAMILY SSF46767 268 347 2.62E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 318 324 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 Gene3D G3DSA:3.40.10.10 5 84 9.9E-34 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 SMART SM00342 98 180 8.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 PIRSF PIRSF000409 1 357 2.9E-138 T 22-04-2016 IPR016221 Bifunctional regulatory protein Ada JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 Gene3D G3DSA:1.10.10.60 144 179 3.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 268 347 3.5E-34 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 Gene3D G3DSA:1.10.10.10 267 349 1.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 SUPERFAMILY SSF57884 2 84 4.58E-32 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 Gene3D G3DSA:1.10.10.60 85 135 5.6E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS09100 398d8cf90a7aa4f29c917efafab38577 364 Pfam PF12833 Helix-turn-helix domain 104 181 9.4E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 Gene3D G3DSA:3.40.50.150 12 250 8.4E-94 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 Pfam PF01266 FAD dependent oxidoreductase 262 627 1.2E-40 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 122 240 1.6E-35 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 262 657 5.6E-125 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 Gene3D G3DSA:3.50.50.60 255 301 2.6E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 SUPERFAMILY SSF54373 480 564 4.32E-10 T 22-04-2016 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 PANTHER PTHR13847 598 658 8.0E-36 T 22-04-2016 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 PANTHER PTHR13847 223 582 8.0E-36 T 22-04-2016 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 PANTHER PTHR13847:SF206 598 658 8.0E-36 T 22-04-2016 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 PANTHER PTHR13847:SF206 223 582 8.0E-36 T 22-04-2016 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 6 652 24.821 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 Gene3D G3DSA:3.30.9.10 415 565 3.6E-20 T 22-04-2016 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 SUPERFAMILY SSF51905 601 655 5.63E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08620 d8dbce1194c09776d3a4b2682a2a6cef 660 SUPERFAMILY SSF51905 262 479 5.63E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 Gene3D G3DSA:3.30.70.1170 205 260 6.1E-18 T 22-04-2016 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 Pfam PF01189 16S rRNA methyltransferase RsmB/F 271 466 6.2E-49 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 SUPERFAMILY SSF53335 173 469 1.91E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 Gene3D G3DSA:3.40.50.150 262 468 1.8E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 345 356 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 PANTHER PTHR22807 71 469 3.2E-71 T 22-04-2016 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 252 266 1.7E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 396 412 1.7E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 451 468 1.7E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 346 358 1.7E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 281 291 1.7E-25 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 SUPERFAMILY SSF48013 38 181 2.4E-15 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 38 469 4.3E-87 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 Pfam PF01029 NusB family 60 158 1.7E-5 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 PANTHER PTHR22807:SF30 71 469 3.2E-71 T 22-04-2016 JE55_RS09240 f1ff38dba41e1ab1bc4284cab77a16ee 469 Gene3D G3DSA:1.10.940.10 38 181 8.7E-15 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 SMART SM00437 279 556 4.7E-74 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 316 331 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 SMART SM00436 126 221 1.0E-23 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 Gene3D G3DSA:1.10.290.10 290 417 1.9E-40 T 22-04-2016 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 Gene3D G3DSA:3.40.50.140 4 149 3.3E-43 T 22-04-2016 IPR006171 Toprim domain JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 Pfam PF01751 Toprim domain 5 132 6.1E-12 T 22-04-2016 IPR006171 Toprim domain JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 SMART SM00493 3 126 9.9E-14 T 22-04-2016 IPR006171 Toprim domain JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 Pfam PF13342 C-terminal repeat of topoisomerase 756 816 9.2E-19 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 Pfam PF13342 C-terminal repeat of topoisomerase 645 709 1.0E-19 T 22-04-2016 IPR025589 Topoisomerase C-terminal repeat JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 404 420 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 519 533 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 3.9E-27 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 Gene3D G3DSA:1.10.460.10 156 215 2.0E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 Gene3D G3DSA:1.10.460.10 489 610 2.0E-51 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 SUPERFAMILY SSF56712 3 609 3.4E-173 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 PANTHER PTHR11390 519 631 3.7E-154 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 PANTHER PTHR11390 1 502 3.7E-154 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 619 1.2E-168 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 JE55_RS09200 12bee19483313763c830bbb5ab956aa7 869 Pfam PF01131 DNA topoisomerase 154 595 8.4E-117 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 Gene3D G3DSA:1.10.287.130 232 299 3.5E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 Pfam PF08521 Two-component sensor kinase N-terminal 17 160 5.3E-38 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 456 4.3E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 303 1.4E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 PANTHER PTHR24423 6 21 5.2E-61 T 22-04-2016 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 PANTHER PTHR24423 179 459 5.2E-61 T 22-04-2016 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 PANTHER PTHR24423:SF474 6 21 5.2E-61 T 22-04-2016 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 PANTHER PTHR24423:SF474 179 459 5.2E-61 T 22-04-2016 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 SMART SM00388 238 304 5.8E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 SUPERFAMILY SSF55874 294 456 1.09E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 SUPERFAMILY SSF47384 222 303 1.41E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 SMART SM00387 349 458 3.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08800 9c7b5193ec3da81b5077236723217dea 459 Gene3D G3DSA:3.30.565.10 312 456 3.5E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 Pfam PF02811 PHP domain 8 173 8.5E-43 T 22-04-2016 IPR004013 PHP domain GO:0003824 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 SUPERFAMILY SSF89550 162 227 2.35E-10 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 SUPERFAMILY SSF89550 7 90 2.35E-10 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 Gene3D G3DSA:1.10.150.280 836 870 1.3E-4 T 22-04-2016 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 SMART SM00481 7 74 3.9E-23 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 Pfam PF14579 Helix-hairpin-helix motif 803 898 3.2E-29 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 Pfam PF01336 OB-fold nucleic acid binding domain 988 1061 3.7E-7 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 Gene3D G3DSA:2.40.50.140 971 1067 1.2E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 PANTHER PTHR32294:SF0 2 1103 0.0 T 22-04-2016 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 PANTHER PTHR32294:SF0 1128 1174 0.0 T 22-04-2016 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1022 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 PANTHER PTHR32294 2 1103 0.0 T 22-04-2016 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 PANTHER PTHR32294 1128 1174 0.0 T 22-04-2016 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 Gene3D G3DSA:3.20.20.140 6 256 2.8E-19 T 22-04-2016 JE55_RS13905 041a3645b17fdd9e2d7097adb7160ec3 1174 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 293 730 1.3E-176 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS00855 9538efdfdf6b1f68bbd990b9f075d1b8 241 SMART SM00862 159 235 3.9E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS00855 9538efdfdf6b1f68bbd990b9f075d1b8 241 PANTHER PTHR26402:SF292 7 240 1.6E-109 T 22-04-2016 JE55_RS00855 9538efdfdf6b1f68bbd990b9f075d1b8 241 SUPERFAMILY SSF52172 4 127 5.12E-42 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS00855 9538efdfdf6b1f68bbd990b9f075d1b8 241 Pfam PF00072 Response regulator receiver domain 9 118 5.0E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS00855 9538efdfdf6b1f68bbd990b9f075d1b8 241 SMART SM00448 7 118 3.8E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS00855 9538efdfdf6b1f68bbd990b9f075d1b8 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 235 9.9E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS00855 9538efdfdf6b1f68bbd990b9f075d1b8 241 Gene3D G3DSA:1.10.10.10 136 237 7.0E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00855 9538efdfdf6b1f68bbd990b9f075d1b8 241 PANTHER PTHR26402 7 240 1.6E-109 T 22-04-2016 JE55_RS00855 9538efdfdf6b1f68bbd990b9f075d1b8 241 SUPERFAMILY SSF46894 136 237 4.25E-29 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS00855 9538efdfdf6b1f68bbd990b9f075d1b8 241 Gene3D G3DSA:3.40.50.2300 4 127 5.8E-41 T 22-04-2016 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 Pfam PF01842 ACT domain 277 331 6.6E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 413 1.0E-127 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 Pfam PF00696 Amino acid kinase family 3 229 4.2E-50 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 PIRSF PIRSF000726 57 416 3.5E-140 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 SUPERFAMILY SSF53633 4 250 1.44E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 412 2.5E-113 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 PANTHER PTHR21499 1 415 2.1E-162 T 22-04-2016 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 SUPERFAMILY SSF55021 342 414 8.51E-25 T 22-04-2016 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 SUPERFAMILY SSF55021 257 335 5.89E-18 T 22-04-2016 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 Gene3D G3DSA:3.40.1160.10 1 255 1.5E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 Pfam PF13840 ACT domain 349 409 6.0E-17 T 22-04-2016 IPR027795 GATS-like ACT domain JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 8.1E-5 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 8.1E-5 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 JE55_RS01660 1e79eeef1d5f019cacc5c4b475ef87cf 416 PANTHER PTHR21499:SF27 1 415 2.1E-162 T 22-04-2016 JE55_RS12235 26f88ef59f041d4a7c748fc64a663d5e 344 PANTHER PTHR10794 17 344 3.3E-60 T 22-04-2016 JE55_RS12235 26f88ef59f041d4a7c748fc64a663d5e 344 SUPERFAMILY SSF53474 41 328 5.83E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS12235 26f88ef59f041d4a7c748fc64a663d5e 344 Pfam PF00561 alpha/beta hydrolase fold 84 321 2.7E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS12235 26f88ef59f041d4a7c748fc64a663d5e 344 Gene3D G3DSA:3.40.50.1820 80 194 7.1E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS12235 26f88ef59f041d4a7c748fc64a663d5e 344 Gene3D G3DSA:3.40.50.1820 268 338 7.1E-29 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS12235 26f88ef59f041d4a7c748fc64a663d5e 344 PIRSF PIRSF005211 3 344 3.0E-105 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- JE55_RS17850 988ab7f2e45e4ad5c7c2de1ab902aee1 480 PANTHER PTHR10617:SF113 1 434 6.4E-79 T 22-04-2016 JE55_RS17850 988ab7f2e45e4ad5c7c2de1ab902aee1 480 Gene3D G3DSA:3.50.50.60 281 325 5.1E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS17850 988ab7f2e45e4ad5c7c2de1ab902aee1 480 Gene3D G3DSA:3.50.50.60 4 182 5.1E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS17850 988ab7f2e45e4ad5c7c2de1ab902aee1 480 SUPERFAMILY SSF51905 7 177 1.79E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS17850 988ab7f2e45e4ad5c7c2de1ab902aee1 480 SUPERFAMILY SSF51905 276 362 1.79E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS17850 988ab7f2e45e4ad5c7c2de1ab902aee1 480 PANTHER PTHR10617 1 434 6.4E-79 T 22-04-2016 JE55_RS17850 988ab7f2e45e4ad5c7c2de1ab902aee1 480 Pfam PF04820 Tryptophan halogenase 8 95 6.4E-14 T 22-04-2016 IPR006905 Tryptophan halogenase JE55_RS17850 988ab7f2e45e4ad5c7c2de1ab902aee1 480 Pfam PF04820 Tryptophan halogenase 97 363 1.1E-24 T 22-04-2016 IPR006905 Tryptophan halogenase JE55_RS17850 988ab7f2e45e4ad5c7c2de1ab902aee1 480 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.8E-10 T 22-04-2016 JE55_RS17850 988ab7f2e45e4ad5c7c2de1ab902aee1 480 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 1.8E-10 T 22-04-2016 JE55_RS17850 988ab7f2e45e4ad5c7c2de1ab902aee1 480 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 1.8E-10 T 22-04-2016 JE55_RS11785 434d98c78307e3c122f736b6e61d270f 288 PANTHER PTHR22911 1 279 4.9E-24 T 22-04-2016 JE55_RS11785 434d98c78307e3c122f736b6e61d270f 288 PANTHER PTHR22911:SF54 1 279 4.9E-24 T 22-04-2016 JE55_RS11785 434d98c78307e3c122f736b6e61d270f 288 SUPERFAMILY SSF103481 185 282 1.7E-11 T 22-04-2016 JE55_RS11785 434d98c78307e3c122f736b6e61d270f 288 Pfam PF00892 EamA-like transporter family 2 134 1.2E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS11785 434d98c78307e3c122f736b6e61d270f 288 Pfam PF00892 EamA-like transporter family 150 279 8.2E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 512 1.1E-62 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 SMART SM00283 266 513 5.1E-97 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 PANTHER PTHR32089:SF63 191 516 8.7E-148 T 22-04-2016 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 1.6E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 1.6E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 1.6E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 1.6E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 Gene3D G3DSA:3.30.450.20 22 180 7.5E-49 T 22-04-2016 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 SMART SM01049 33 127 1.1E-41 T 22-04-2016 IPR033480 Single Cache domain 2 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 SUPERFAMILY SSF58104 235 514 7.32E-74 T 22-04-2016 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 PANTHER PTHR32089 191 516 8.7E-148 T 22-04-2016 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 Pfam PF17200 Single Cache domain 2 38 186 1.7E-39 T 22-04-2016 IPR033480 Single Cache domain 2 JE55_RS10805 a5f89307a984e6c263082cfab8fc64c7 546 Gene3D G3DSA:1.10.287.950 281 485 1.2E-64 T 22-04-2016 JE55_RS02355 39f858b8d92e1b5b93b1c9ae8cc6078e 91 Gene3D G3DSA:1.10.3880.10 1 90 4.0E-43 T 22-04-2016 JE55_RS02355 39f858b8d92e1b5b93b1c9ae8cc6078e 91 PANTHER PTHR36965:SF1 2 91 6.8E-45 T 22-04-2016 JE55_RS02355 39f858b8d92e1b5b93b1c9ae8cc6078e 91 PIRSF PIRSF029827 1 90 2.4E-41 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 JE55_RS02355 39f858b8d92e1b5b93b1c9ae8cc6078e 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.7E-44 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 JE55_RS02355 39f858b8d92e1b5b93b1c9ae8cc6078e 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 29.212 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 JE55_RS02355 39f858b8d92e1b5b93b1c9ae8cc6078e 91 PANTHER PTHR36965 2 91 6.8E-45 T 22-04-2016 JE55_RS02355 39f858b8d92e1b5b93b1c9ae8cc6078e 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 2.0E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 JE55_RS02355 39f858b8d92e1b5b93b1c9ae8cc6078e 91 SUPERFAMILY SSF111148 1 89 1.57E-40 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 JE55_RS14510 32040358b406a7e18d8a84abf9e2e70c 408 Gene3D G3DSA:1.20.140.10 239 403 1.1E-48 T 22-04-2016 JE55_RS14510 32040358b406a7e18d8a84abf9e2e70c 408 Gene3D G3DSA:1.10.540.10 1 134 2.5E-33 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS14510 32040358b406a7e18d8a84abf9e2e70c 408 PANTHER PTHR10909:SF282 1 402 8.7E-225 T 22-04-2016 JE55_RS14510 32040358b406a7e18d8a84abf9e2e70c 408 PANTHER PTHR10909 1 402 8.7E-225 T 22-04-2016 JE55_RS14510 32040358b406a7e18d8a84abf9e2e70c 408 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 249 397 1.1E-36 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS14510 32040358b406a7e18d8a84abf9e2e70c 408 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 136 232 6.4E-22 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS14510 32040358b406a7e18d8a84abf9e2e70c 408 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 131 1.8E-14 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS14510 32040358b406a7e18d8a84abf9e2e70c 408 Gene3D G3DSA:2.40.110.10 135 238 1.5E-41 T 22-04-2016 JE55_RS14510 32040358b406a7e18d8a84abf9e2e70c 408 SUPERFAMILY SSF56645 2 262 8.51E-67 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS14510 32040358b406a7e18d8a84abf9e2e70c 408 SUPERFAMILY SSF47203 247 403 8.7E-46 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS07445 f5ad93e290f302056862564fb63e9ba5 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site JE55_RS07445 f5ad93e290f302056862564fb63e9ba5 232 Gene3D G3DSA:3.40.50.790 69 159 2.4E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich JE55_RS07445 f5ad93e290f302056862564fb63e9ba5 232 PIRSF PIRSF002155 1 227 2.1E-77 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 JE55_RS07445 f5ad93e290f302056862564fb63e9ba5 232 SUPERFAMILY SSF56808 6 225 2.49E-80 T 22-04-2016 IPR023674 Ribosomal protein L1-like JE55_RS07445 f5ad93e290f302056862564fb63e9ba5 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 3.2E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein JE55_RS07445 f5ad93e290f302056862564fb63e9ba5 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.13 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 JE55_RS07445 f5ad93e290f302056862564fb63e9ba5 232 Gene3D G3DSA:3.30.190.20 161 225 1.5E-45 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 JE55_RS07445 f5ad93e290f302056862564fb63e9ba5 232 Gene3D G3DSA:3.30.190.20 16 68 1.5E-45 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 JE55_RS07445 f5ad93e290f302056862564fb63e9ba5 232 PANTHER PTHR23105:SF5 17 225 3.8E-75 T 22-04-2016 JE55_RS07445 f5ad93e290f302056862564fb63e9ba5 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 3.4E-105 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 JE55_RS07445 f5ad93e290f302056862564fb63e9ba5 232 PANTHER PTHR23105 17 225 3.8E-75 T 22-04-2016 JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 Gene3D G3DSA:1.10.8.10 216 246 4.5E-31 T 22-04-2016 JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 Gene3D G3DSA:1.10.8.10 111 180 4.5E-31 T 22-04-2016 JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 Gene3D G3DSA:3.40.50.300 4 110 1.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 Gene3D G3DSA:3.40.50.300 248 335 1.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 Gene3D G3DSA:1.10.8.60 339 447 3.2E-31 T 22-04-2016 JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 PANTHER PTHR11262 221 447 6.1E-196 T 22-04-2016 JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 Pfam PF07724 AAA domain (Cdc48 subfamily) 183 333 2.2E-39 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 447 42.857 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 PANTHER PTHR11262 2 105 6.1E-196 T 22-04-2016 JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 PANTHER PTHR11262:SF3 2 105 6.1E-196 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 SUPERFAMILY SSF52540 3 444 7.79E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 SMART SM01086 339 438 1.2E-15 T 22-04-2016 IPR019489 Clp ATPase, C-terminal JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 PANTHER PTHR11262:SF3 221 447 6.1E-196 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 447 1.3E-204 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 346 409 1.0E-4 T 22-04-2016 IPR019489 Clp ATPase, C-terminal JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 SMART SM00382 49 336 1.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS09405 c6076d692653a075dddc357f1a0229c0 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 98 3.4E-6 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS04110 45437f0d0eb76a4c3721607f1dd4e2e9 211 Gene3D G3DSA:2.40.30.20 5 106 2.2E-22 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS04110 45437f0d0eb76a4c3721607f1dd4e2e9 211 Gene3D G3DSA:2.40.30.20 107 204 5.3E-32 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS04110 45437f0d0eb76a4c3721607f1dd4e2e9 211 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 204 4.9E-52 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04110 45437f0d0eb76a4c3721607f1dd4e2e9 211 SUPERFAMILY SSF63380 95 202 1.11E-31 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 JE55_RS04110 45437f0d0eb76a4c3721607f1dd4e2e9 211 Pfam PF00677 Lumazine binding domain 102 190 3.7E-22 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04110 45437f0d0eb76a4c3721607f1dd4e2e9 211 Pfam PF00677 Lumazine binding domain 3 89 8.9E-14 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04110 45437f0d0eb76a4c3721607f1dd4e2e9 211 PANTHER PTHR21098 1 200 7.3E-83 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04110 45437f0d0eb76a4c3721607f1dd4e2e9 211 SUPERFAMILY SSF63380 1 95 3.23E-16 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 JE55_RS04110 45437f0d0eb76a4c3721607f1dd4e2e9 211 PIRSF PIRSF000498 1 211 1.9E-68 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS11485 2ba484823f053524f68107815c37c904 321 SUPERFAMILY SSF53474 23 305 2.68E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS11485 2ba484823f053524f68107815c37c904 321 Pfam PF07859 alpha/beta hydrolase fold 82 283 2.2E-56 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 JE55_RS11485 2ba484823f053524f68107815c37c904 321 Gene3D G3DSA:3.40.50.1820 75 306 2.5E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS11485 2ba484823f053524f68107815c37c904 321 PANTHER PTHR23024:SF47 80 321 1.9E-70 T 22-04-2016 JE55_RS11485 2ba484823f053524f68107815c37c904 321 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 82 98 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 JE55_RS11485 2ba484823f053524f68107815c37c904 321 PANTHER PTHR23024 80 321 1.9E-70 T 22-04-2016 JE55_RS05275 da9e2de7abb05f59d330197cd1a91af6 232 Pfam PF01168 Alanine racemase, N-terminal domain 9 228 1.1E-31 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS05275 da9e2de7abb05f59d330197cd1a91af6 232 PIRSF PIRSF004848 1 232 2.5E-74 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 JE55_RS05275 da9e2de7abb05f59d330197cd1a91af6 232 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 78 92 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 JE55_RS05275 da9e2de7abb05f59d330197cd1a91af6 232 PANTHER PTHR10146 1 230 4.1E-106 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 JE55_RS05275 da9e2de7abb05f59d330197cd1a91af6 232 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 228 5.7E-80 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 JE55_RS05275 da9e2de7abb05f59d330197cd1a91af6 232 Gene3D G3DSA:3.20.20.10 1 231 4.5E-96 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS05275 da9e2de7abb05f59d330197cd1a91af6 232 SUPERFAMILY SSF51419 1 226 5.89E-82 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 PANTHER PTHR30126:SF3 3 293 9.5E-89 T 22-04-2016 JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.9E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 SUPERFAMILY SSF46785 2 112 9.7E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 Pfam PF03466 LysR substrate binding domain 90 296 6.1E-29 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 SUPERFAMILY SSF53850 92 297 6.79E-31 T 22-04-2016 JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 Gene3D G3DSA:1.10.10.10 3 89 5.6E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 Gene3D G3DSA:3.40.190.10 92 178 2.4E-12 T 22-04-2016 JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 PANTHER PTHR30126 3 293 9.5E-89 T 22-04-2016 JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS12500 ab84b192dabebe4111bcd49d48a9acc2 304 Gene3D G3DSA:3.40.190.10 179 267 6.4E-12 T 22-04-2016 JE55_RS04285 401e68c55af8d20c8174a9299756ee19 100 PANTHER PTHR33569:SF1 2 99 2.2E-45 T 22-04-2016 JE55_RS04285 401e68c55af8d20c8174a9299756ee19 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 7.7E-54 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04285 401e68c55af8d20c8174a9299756ee19 100 Gene3D G3DSA:3.30.280.10 1 99 1.4E-49 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04285 401e68c55af8d20c8174a9299756ee19 100 PIRSF PIRSF001223 1 100 7.6E-51 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04285 401e68c55af8d20c8174a9299756ee19 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 7.0E-37 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04285 401e68c55af8d20c8174a9299756ee19 100 PANTHER PTHR33569 2 99 2.2E-45 T 22-04-2016 JE55_RS04285 401e68c55af8d20c8174a9299756ee19 100 Pfam PF00547 Urease, gamma subunit 1 99 1.8E-47 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04285 401e68c55af8d20c8174a9299756ee19 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.827 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04285 401e68c55af8d20c8174a9299756ee19 100 SUPERFAMILY SSF54111 1 99 1.16E-46 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 Pfam PF00072 Response regulator receiver domain 5 114 3.9E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 Gene3D G3DSA:1.10.8.60 326 393 1.1E-11 T 22-04-2016 JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 445 465 1.7E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 445 1.7E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 SUPERFAMILY SSF52172 1 188 8.4E-39 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 Pfam PF02954 Bacterial regulatory protein, Fis family 422 461 7.8E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 SMART SM00448 2 115 9.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 SMART SM00382 164 316 1.5E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 SUPERFAMILY SSF46689 371 464 7.47E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 Gene3D G3DSA:1.10.10.60 419 461 1.6E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 Gene3D G3DSA:3.40.50.2300 1 126 3.1E-29 T 22-04-2016 JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 Gene3D G3DSA:3.40.50.300 141 206 1.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 Gene3D G3DSA:3.40.50.300 239 325 1.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 PANTHER PTHR32071 5 464 7.3E-119 T 22-04-2016 JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 SUPERFAMILY SSF52540 144 388 1.27E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03090 c54c80ab3e7f71c2b3b6366a97a70159 465 Pfam PF00158 Sigma-54 interaction domain 144 319 3.1E-47 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 PANTHER PTHR10887 173 331 2.7E-50 T 22-04-2016 JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 PANTHER PTHR10887 815 868 2.7E-50 T 22-04-2016 JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 PANTHER PTHR10887 614 742 2.7E-50 T 22-04-2016 JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 PANTHER PTHR10887:SF284 173 331 2.7E-50 T 22-04-2016 JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 PANTHER PTHR10887:SF284 815 868 2.7E-50 T 22-04-2016 JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 PANTHER PTHR10887:SF284 614 742 2.7E-50 T 22-04-2016 JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 SUPERFAMILY SSF52540 622 653 6.64E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 SUPERFAMILY SSF52540 715 885 6.64E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 Gene3D G3DSA:3.40.50.300 174 311 1.0E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 Pfam PF13538 UvrD-like helicase C-terminal domain 815 861 3.3E-13 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 Gene3D G3DSA:3.40.50.300 629 655 5.6E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 Gene3D G3DSA:3.40.50.300 694 745 5.6E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 Gene3D G3DSA:3.40.50.300 803 874 5.6E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 Gene3D G3DSA:3.40.50.300 312 326 5.6E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 Pfam PF13604 AAA domain 179 362 4.4E-31 T 22-04-2016 JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 35 886 45.64 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 JE55_RS14795 a2c704f4de42db2d6aa6ec216f98ac51 898 SUPERFAMILY SSF52540 171 330 1.16E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12880 d80053200a73d5643356decedc816dec 220 Gene3D G3DSA:3.40.50.170 1 194 5.1E-71 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS12880 d80053200a73d5643356decedc816dec 220 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.248 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 JE55_RS12880 d80053200a73d5643356decedc816dec 220 SUPERFAMILY SSF53328 2 201 3.79E-65 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS12880 d80053200a73d5643356decedc816dec 220 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 3.0E-73 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 JE55_RS12880 d80053200a73d5643356decedc816dec 220 Pfam PF00551 Formyl transferase 2 182 4.9E-59 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS12880 d80053200a73d5643356decedc816dec 220 PANTHER PTHR10520 1 194 6.2E-97 T 22-04-2016 JE55_RS13090 702e89fb375eb9d3f0c67737fb12a594 257 PANTHER PTHR21091 1 210 9.7E-59 T 22-04-2016 JE55_RS13090 702e89fb375eb9d3f0c67737fb12a594 257 Gene3D G3DSA:3.30.950.10 117 236 2.0E-30 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 JE55_RS13090 702e89fb375eb9d3f0c67737fb12a594 257 Gene3D G3DSA:3.40.1010.10 1 116 1.8E-42 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 JE55_RS13090 702e89fb375eb9d3f0c67737fb12a594 257 PANTHER PTHR21091:SF16 1 210 9.7E-59 T 22-04-2016 JE55_RS13090 702e89fb375eb9d3f0c67737fb12a594 257 SUPERFAMILY SSF53790 1 236 1.22E-62 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS13090 702e89fb375eb9d3f0c67737fb12a594 257 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 81 114 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 JE55_RS13090 702e89fb375eb9d3f0c67737fb12a594 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 209 5.6E-47 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS13090 702e89fb375eb9d3f0c67737fb12a594 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 JE55_RS13090 702e89fb375eb9d3f0c67737fb12a594 257 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 233 2.4E-80 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 JE55_RS10010 4164df943921e0244ba2074c336b5fb6 331 Gene3D G3DSA:3.40.50.620 50 233 1.7E-21 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS10010 4164df943921e0244ba2074c336b5fb6 331 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 36 297 57.207 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 JE55_RS10010 4164df943921e0244ba2074c336b5fb6 331 PANTHER PTHR11807 24 292 1.2E-110 T 22-04-2016 JE55_RS10010 4164df943921e0244ba2074c336b5fb6 331 Pfam PF01171 PP-loop family 67 229 1.6E-15 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal JE55_RS10010 4164df943921e0244ba2074c336b5fb6 331 SUPERFAMILY SSF52402 43 261 3.56E-55 T 22-04-2016 JE55_RS10010 4164df943921e0244ba2074c336b5fb6 331 PANTHER PTHR11807:SF16 24 292 1.2E-110 T 22-04-2016 JE55_RS18075 7471534549887a6d000b15bbbe1f553f 425 Gene3D G3DSA:1.20.1250.20 11 204 6.9E-40 T 22-04-2016 JE55_RS18075 7471534549887a6d000b15bbbe1f553f 425 Gene3D G3DSA:1.20.1250.20 221 411 7.8E-31 T 22-04-2016 JE55_RS18075 7471534549887a6d000b15bbbe1f553f 425 SUPERFAMILY SSF103473 6 409 9.81E-82 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS18075 7471534549887a6d000b15bbbe1f553f 425 PANTHER PTHR11662:SF3 8 411 2.6E-117 T 22-04-2016 JE55_RS18075 7471534549887a6d000b15bbbe1f553f 425 Pfam PF07690 Major Facilitator Superfamily 268 412 1.5E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS18075 7471534549887a6d000b15bbbe1f553f 425 Pfam PF07690 Major Facilitator Superfamily 17 258 4.6E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS18075 7471534549887a6d000b15bbbe1f553f 425 PANTHER PTHR11662 8 411 2.6E-117 T 22-04-2016 JE55_RS01585 893ba94f8bb0d1e16d3a7e6af77d0987 292 PANTHER PTHR30468 1 281 9.7E-70 T 22-04-2016 JE55_RS01585 893ba94f8bb0d1e16d3a7e6af77d0987 292 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 5 269 1.4E-55 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 JE55_RS01585 893ba94f8bb0d1e16d3a7e6af77d0987 292 Gene3D G3DSA:3.60.130.10 2 283 2.0E-84 T 22-04-2016 JE55_RS01585 893ba94f8bb0d1e16d3a7e6af77d0987 292 SUPERFAMILY SSF51197 3 281 3.71E-82 T 22-04-2016 JE55_RS01585 893ba94f8bb0d1e16d3a7e6af77d0987 292 PANTHER PTHR30468:SF5 1 281 9.7E-70 T 22-04-2016 JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 SUPERFAMILY SSF52518 367 569 3.75E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 SUPERFAMILY SSF52467 156 355 1.08E-36 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 PANTHER PTHR18968 3 603 3.6E-220 T 22-04-2016 JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 327 1.5E-21 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 Gene3D G3DSA:3.40.50.970 344 555 1.4E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 Gene3D G3DSA:3.40.50.1220 192 343 2.2E-37 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 SUPERFAMILY SSF52518 2 172 3.26E-46 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 Gene3D G3DSA:3.40.50.970 3 175 2.4E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 171 2.4E-46 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 PANTHER PTHR18968:SF124 3 603 3.6E-220 T 22-04-2016 JE55_RS12030 39567ecd9b7bfdbbdbb7475fa14a5e77 608 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 545 4.1E-25 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JE55_RS09635 b16c3c4bf455c193976713d297c453ac 373 PANTHER PTHR13847 1 366 1.8E-157 T 22-04-2016 JE55_RS09635 b16c3c4bf455c193976713d297c453ac 373 Gene3D G3DSA:3.50.50.60 141 222 4.2E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09635 b16c3c4bf455c193976713d297c453ac 373 Gene3D G3DSA:3.50.50.60 5 86 4.2E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09635 b16c3c4bf455c193976713d297c453ac 373 Gene3D G3DSA:3.50.50.60 325 370 4.2E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09635 b16c3c4bf455c193976713d297c453ac 373 Gene3D G3DSA:3.30.9.10 226 244 1.4E-5 T 22-04-2016 JE55_RS09635 b16c3c4bf455c193976713d297c453ac 373 Gene3D G3DSA:3.30.9.10 88 140 1.4E-5 T 22-04-2016 JE55_RS09635 b16c3c4bf455c193976713d297c453ac 373 Pfam PF01266 FAD dependent oxidoreductase 7 365 4.2E-68 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JE55_RS09635 b16c3c4bf455c193976713d297c453ac 373 PANTHER PTHR13847:SF207 1 366 1.8E-157 T 22-04-2016 JE55_RS09635 b16c3c4bf455c193976713d297c453ac 373 SUPERFAMILY SSF51905 7 223 5.61E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS29010 2c92099a8189ada33d96765ba5232f5f 291 SUPERFAMILY SSF53067 1 202 4.53E-72 T 22-04-2016 JE55_RS29010 2c92099a8189ada33d96765ba5232f5f 291 PANTHER PTHR10196 9 288 1.1E-142 T 22-04-2016 JE55_RS29010 2c92099a8189ada33d96765ba5232f5f 291 PANTHER PTHR10196:SF69 9 288 1.1E-142 T 22-04-2016 JE55_RS29010 2c92099a8189ada33d96765ba5232f5f 291 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 199 1.7E-62 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JE55_RS29010 2c92099a8189ada33d96765ba5232f5f 291 SUPERFAMILY SSF53067 201 290 2.5E-23 T 22-04-2016 JE55_RS29010 2c92099a8189ada33d96765ba5232f5f 291 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 83 95 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 JE55_RS29010 2c92099a8189ada33d96765ba5232f5f 291 Gene3D G3DSA:3.30.420.40 1 200 1.0E-81 T 22-04-2016 JE55_RS29010 2c92099a8189ada33d96765ba5232f5f 291 Gene3D G3DSA:3.30.420.40 201 290 1.7E-31 T 22-04-2016 JE55_RS29010 2c92099a8189ada33d96765ba5232f5f 291 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 209 289 5.7E-15 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JE55_RS07035 9169c51875152694eb79ca974028899f 89 SUPERFAMILY SSF52091 10 85 5.69E-11 T 22-04-2016 IPR002645 STAS domain JE55_RS07035 9169c51875152694eb79ca974028899f 89 Gene3D G3DSA:3.30.750.24 14 85 8.8E-10 T 22-04-2016 IPR002645 STAS domain JE55_RS07035 9169c51875152694eb79ca974028899f 89 Pfam PF13466 STAS domain 9 82 2.7E-18 T 22-04-2016 IPR002645 STAS domain JE55_RS00165 cff765fe913a502895a175d78d9512b0 378 Pfam PF04055 Radical SAM superfamily 110 286 2.2E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS00165 cff765fe913a502895a175d78d9512b0 378 SUPERFAMILY SSF102114 105 327 2.65E-12 T 22-04-2016 JE55_RS00165 cff765fe913a502895a175d78d9512b0 378 PANTHER PTHR30544 8 376 1.7E-162 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS00165 cff765fe913a502895a175d78d9512b0 378 PIRSF PIRSF006004 5 372 1.1E-143 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS00165 cff765fe913a502895a175d78d9512b0 378 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 5 363 2.8E-131 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS00165 cff765fe913a502895a175d78d9512b0 378 Gene3D G3DSA:3.20.20.70 106 313 5.7E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS00165 cff765fe913a502895a175d78d9512b0 378 PANTHER PTHR30544:SF5 8 376 1.7E-162 T 22-04-2016 JE55_RS00165 cff765fe913a502895a175d78d9512b0 378 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 6 359 72.496 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS04490 11586e7041dd2da64e8d9a5b171ea5e8 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.4E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS04490 11586e7041dd2da64e8d9a5b171ea5e8 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.4E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS04490 11586e7041dd2da64e8d9a5b171ea5e8 97 PRINTS PR00297 10kDa chaperonin signature 81 94 1.4E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS04490 11586e7041dd2da64e8d9a5b171ea5e8 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.4E-33 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS04490 11586e7041dd2da64e8d9a5b171ea5e8 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 JE55_RS04490 11586e7041dd2da64e8d9a5b171ea5e8 97 Gene3D G3DSA:2.30.33.40 1 94 8.7E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS04490 11586e7041dd2da64e8d9a5b171ea5e8 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.2E-35 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS04490 11586e7041dd2da64e8d9a5b171ea5e8 97 SUPERFAMILY SSF50129 1 95 2.47E-34 T 22-04-2016 IPR011032 GroES-like JE55_RS04490 11586e7041dd2da64e8d9a5b171ea5e8 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 26.725 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS04490 11586e7041dd2da64e8d9a5b171ea5e8 97 PANTHER PTHR10772 1 94 1.8E-42 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS04490 11586e7041dd2da64e8d9a5b171ea5e8 97 SMART SM00883 2 94 2.9E-57 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS01670 9b613255f00daa0196041dad06b09100 323 PANTHER PTHR22855:SF42 1 318 2.6E-125 T 22-04-2016 JE55_RS01670 9b613255f00daa0196041dad06b09100 323 Gene3D G3DSA:3.90.226.10 58 274 5.0E-48 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS01670 9b613255f00daa0196041dad06b09100 323 PANTHER PTHR22855 1 318 2.6E-125 T 22-04-2016 JE55_RS01670 9b613255f00daa0196041dad06b09100 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 1.6E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 JE55_RS01670 9b613255f00daa0196041dad06b09100 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 1.6E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 JE55_RS01670 9b613255f00daa0196041dad06b09100 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 1.6E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 JE55_RS01670 9b613255f00daa0196041dad06b09100 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 1.6E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 JE55_RS01670 9b613255f00daa0196041dad06b09100 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 1.6E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 JE55_RS01670 9b613255f00daa0196041dad06b09100 323 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 1.6E-45 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 JE55_RS01670 9b613255f00daa0196041dad06b09100 323 SUPERFAMILY SSF52096 5 316 3.28E-102 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS01670 9b613255f00daa0196041dad06b09100 323 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 9.3E-67 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 JE55_RS01670 9b613255f00daa0196041dad06b09100 323 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.264 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 JE55_RS01670 9b613255f00daa0196041dad06b09100 323 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.3E-150 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 JE55_RS03890 eab6ca0f14453f07ce33edbddd37b1aa 405 PANTHER PTHR13932:SF7 27 404 1.1E-171 T 22-04-2016 JE55_RS03890 eab6ca0f14453f07ce33edbddd37b1aa 405 Gene3D G3DSA:3.80.30.20 31 261 2.2E-29 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS03890 eab6ca0f14453f07ce33edbddd37b1aa 405 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 30 381 3.5E-111 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- JE55_RS03890 eab6ca0f14453f07ce33edbddd37b1aa 405 PANTHER PTHR13932 27 404 1.1E-171 T 22-04-2016 JE55_RS03890 eab6ca0f14453f07ce33edbddd37b1aa 405 SUPERFAMILY SSF102114 24 402 1.44E-106 T 22-04-2016 JE55_RS03890 eab6ca0f14453f07ce33edbddd37b1aa 405 Pfam PF06969 HemN C-terminal domain 330 391 1.5E-11 T 22-04-2016 IPR010723 HemN, C-terminal JE55_RS03890 eab6ca0f14453f07ce33edbddd37b1aa 405 Pfam PF04055 Radical SAM superfamily 33 203 7.1E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS03890 eab6ca0f14453f07ce33edbddd37b1aa 405 SMART SM00729 28 245 8.2E-50 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 JE55_RS04600 e8625c3b490907d2f6897ef14777a6bc 473 Pfam PF16868 NMT1-like family 78 329 5.2E-14 T 22-04-2016 IPR011852 TRAP transporter solute receptor, TAXI family JE55_RS04600 e8625c3b490907d2f6897ef14777a6bc 473 Gene3D G3DSA:3.40.190.10 53 120 1.5E-6 T 22-04-2016 JE55_RS04600 e8625c3b490907d2f6897ef14777a6bc 473 PANTHER PTHR30024:SF13 19 258 2.1E-37 T 22-04-2016 JE55_RS04600 e8625c3b490907d2f6897ef14777a6bc 473 PANTHER PTHR30024:SF13 279 434 2.1E-37 T 22-04-2016 JE55_RS04600 e8625c3b490907d2f6897ef14777a6bc 473 SUPERFAMILY SSF53850 52 329 2.51E-38 T 22-04-2016 JE55_RS04600 e8625c3b490907d2f6897ef14777a6bc 473 PANTHER PTHR30024 19 258 2.1E-37 T 22-04-2016 JE55_RS04600 e8625c3b490907d2f6897ef14777a6bc 473 PANTHER PTHR30024 279 434 2.1E-37 T 22-04-2016 JE55_RS04600 e8625c3b490907d2f6897ef14777a6bc 473 Gene3D G3DSA:3.40.190.10 145 270 5.7E-18 T 22-04-2016 JE55_RS10680 cd9913348da22a0b4a7b9b2d989f6eea 252 SUPERFAMILY SSF69572 2 247 3.53E-85 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JE55_RS10680 cd9913348da22a0b4a7b9b2d989f6eea 252 PANTHER PTHR10953 1 247 4.1E-88 T 22-04-2016 JE55_RS10680 cd9913348da22a0b4a7b9b2d989f6eea 252 Gene3D G3DSA:3.40.50.720 3 247 2.8E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10680 cd9913348da22a0b4a7b9b2d989f6eea 252 Pfam PF00899 ThiF family 9 243 2.5E-62 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JE55_RS10680 cd9913348da22a0b4a7b9b2d989f6eea 252 PANTHER PTHR10953:SF158 1 247 4.1E-88 T 22-04-2016 JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 Gene3D G3DSA:3.40.190.10 195 262 7.9E-16 T 22-04-2016 JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 Gene3D G3DSA:1.10.10.10 2 81 3.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 Gene3D G3DSA:3.40.190.10 82 194 1.2E-20 T 22-04-2016 JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 Pfam PF03466 LysR substrate binding domain 86 273 4.5E-32 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 PANTHER PTHR30126:SF8 1 309 8.2E-107 T 22-04-2016 JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.7E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 SUPERFAMILY SSF53850 87 296 1.1E-30 T 22-04-2016 JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 SUPERFAMILY SSF46785 2 83 1.43E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 PANTHER PTHR30126 1 309 8.2E-107 T 22-04-2016 JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS07625 7feacf3f2cc1a19ac326e7f84dfaf2c6 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.4E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS02580 4f63bbf9d88a0c01015c7af92228f82d 484 Pfam PF01458 Uncharacterized protein family (UPF0051) 222 455 3.1E-65 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 JE55_RS02580 4f63bbf9d88a0c01015c7af92228f82d 484 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 17 475 1.8E-177 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 JE55_RS02580 4f63bbf9d88a0c01015c7af92228f82d 484 SUPERFAMILY SSF101960 110 481 3.27E-129 T 22-04-2016 JE55_RS02580 4f63bbf9d88a0c01015c7af92228f82d 484 SUPERFAMILY SSF101960 39 83 3.27E-129 T 22-04-2016 JE55_RS02580 4f63bbf9d88a0c01015c7af92228f82d 484 PANTHER PTHR30508 5 484 4.2E-291 T 22-04-2016 JE55_RS02580 4f63bbf9d88a0c01015c7af92228f82d 484 PANTHER PTHR30508:SF1 5 484 4.2E-291 T 22-04-2016 JE55_RS11800 bf192a09e4b063b64c3aff4ffefc8b31 451 Gene3D G3DSA:3.65.10.10 29 225 3.6E-31 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS11800 bf192a09e4b063b64c3aff4ffefc8b31 451 SUPERFAMILY SSF55205 12 438 2.94E-84 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JE55_RS11800 bf192a09e4b063b64c3aff4ffefc8b31 451 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 15 429 8.7E-64 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS11800 bf192a09e4b063b64c3aff4ffefc8b31 451 PANTHER PTHR21090 12 441 4.4E-86 T 22-04-2016 JE55_RS11800 bf192a09e4b063b64c3aff4ffefc8b31 451 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 18 437 27.405 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS11800 bf192a09e4b063b64c3aff4ffefc8b31 451 PANTHER PTHR21090:SF5 12 441 4.4E-86 T 22-04-2016 JE55_RS11800 bf192a09e4b063b64c3aff4ffefc8b31 451 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 22 436 1.8E-86 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS11800 bf192a09e4b063b64c3aff4ffefc8b31 451 ProSitePatterns PS00885 EPSP synthase signature 2. 346 364 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS11800 bf192a09e4b063b64c3aff4ffefc8b31 451 PIRSF PIRSF000505 10 441 2.9E-124 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS11800 bf192a09e4b063b64c3aff4ffefc8b31 451 Gene3D G3DSA:3.65.10.10 231 436 7.7E-38 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS06265 297978d7f04c743d5c4c8b25164edfc8 305 Gene3D G3DSA:3.30.1700.10 128 282 3.8E-60 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 JE55_RS06265 297978d7f04c743d5c4c8b25164edfc8 305 SUPERFAMILY SSF54211 133 276 3.94E-52 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS06265 297978d7f04c743d5c4c8b25164edfc8 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 280 49.481 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 JE55_RS06265 297978d7f04c743d5c4c8b25164edfc8 305 PANTHER PTHR33694 1 296 3.8E-130 T 22-04-2016 JE55_RS06265 297978d7f04c743d5c4c8b25164edfc8 305 PANTHER PTHR33694:SF1 1 296 3.8E-130 T 22-04-2016 JE55_RS06265 297978d7f04c743d5c4c8b25164edfc8 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 296 1.8E-126 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 JE55_RS06265 297978d7f04c743d5c4c8b25164edfc8 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 1.3E-107 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 JE55_RS06265 297978d7f04c743d5c4c8b25164edfc8 305 Gene3D G3DSA:3.30.230.20 3 125 1.0E-44 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 JE55_RS06265 297978d7f04c743d5c4c8b25164edfc8 305 SUPERFAMILY SSF54211 3 124 2.96E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS15600 27804eeacc63aed873985d35dc2ecdb5 616 PANTHER PTHR35370 2 616 1.8E-102 T 22-04-2016 JE55_RS15600 27804eeacc63aed873985d35dc2ecdb5 616 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 615 8.2E-180 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like JE55_RS15600 27804eeacc63aed873985d35dc2ecdb5 616 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 5 612 1.6E-174 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like JE55_RS15600 27804eeacc63aed873985d35dc2ecdb5 616 PANTHER PTHR35370:SF1 2 616 1.8E-102 T 22-04-2016 JE55_RS15600 27804eeacc63aed873985d35dc2ecdb5 616 PIRSF PIRSF028304 1 615 1.3E-146 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 SUPERFAMILY SSF53901 280 400 1.92E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 Pfam PF02803 Thiolase, C-terminal domain 279 400 1.5E-44 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 SUPERFAMILY SSF53901 2 278 3.01E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 Gene3D G3DSA:3.40.47.10 3 125 6.1E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 Gene3D G3DSA:3.40.47.10 184 284 6.1E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 PIRSF PIRSF000429 1 401 2.3E-112 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 Pfam PF00108 Thiolase, N-terminal domain 4 227 1.8E-47 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 PANTHER PTHR18919:SF12 1 227 6.1E-211 T 22-04-2016 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 PANTHER PTHR18919:SF12 249 401 6.1E-211 T 22-04-2016 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 PANTHER PTHR18919 1 227 6.1E-211 T 22-04-2016 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 PANTHER PTHR18919 249 401 6.1E-211 T 22-04-2016 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 399 4.7E-125 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 Gene3D G3DSA:3.40.47.10 145 183 1.1E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08915 d3f80e0a22940ff097bde6c4851dc16a 401 Gene3D G3DSA:3.40.47.10 285 400 1.1E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS04945 4f975f25f0ca28b88970cdab115487b4 355 PANTHER PTHR30576 147 355 6.3E-105 T 22-04-2016 JE55_RS04945 4f975f25f0ca28b88970cdab115487b4 355 Pfam PF02397 Bacterial sugar transferase 159 349 4.0E-54 T 22-04-2016 IPR003362 Bacterial sugar transferase JE55_RS04945 4f975f25f0ca28b88970cdab115487b4 355 PANTHER PTHR30576:SF4 147 355 6.3E-105 T 22-04-2016 JE55_RS04945 4f975f25f0ca28b88970cdab115487b4 355 Pfam PF13727 CoA-binding domain 52 159 3.0E-12 T 22-04-2016 JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 SMART SM00564 187 219 460.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 SMART SM00564 102 133 140.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 SMART SM00564 318 349 37.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 SMART SM00564 63 94 9.2E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 SMART SM00564 141 173 0.0045 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 SMART SM00564 276 308 13.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 Pfam PF13360 PQQ-like domain 76 307 6.1E-58 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 PANTHER PTHR32303:SF8 27 362 1.5E-58 T 22-04-2016 JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 SUPERFAMILY SSF50998 28 371 2.92E-74 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 PANTHER PTHR32303 27 362 1.5E-58 T 22-04-2016 JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 11 378 1.3E-130 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 Gene3D G3DSA:2.140.10.10 8 380 1.7E-70 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain JE55_RS00140 9388da9c76a27e544154849468fdca1d 381 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 5 380 38.091 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB JE55_RS16930 115e8054087b2b916e3cecb0113470c4 471 Pfam PF01551 Peptidase family M23 305 402 9.9E-32 T 22-04-2016 IPR016047 Peptidase M23 JE55_RS16930 115e8054087b2b916e3cecb0113470c4 471 SUPERFAMILY SSF51261 196 405 1.94E-56 T 22-04-2016 IPR011055 Duplicated hybrid motif JE55_RS16930 115e8054087b2b916e3cecb0113470c4 471 Gene3D G3DSA:2.70.70.10 265 406 1.1E-46 T 22-04-2016 JE55_RS16930 115e8054087b2b916e3cecb0113470c4 471 PANTHER PTHR21666 201 403 9.7E-42 T 22-04-2016 JE55_RS11710 44691b25ac741370f299673f619d0e94 187 PANTHER PTHR23133 1 181 4.2E-72 T 22-04-2016 JE55_RS11710 44691b25ac741370f299673f619d0e94 187 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 9 148 1.9E-46 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 JE55_RS11710 44691b25ac741370f299673f619d0e94 187 PIRSF PIRSF004682 1 182 6.2E-53 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 JE55_RS11710 44691b25ac741370f299673f619d0e94 187 Pfam PF13242 HAD-hyrolase-like 105 175 8.4E-12 T 22-04-2016 JE55_RS11710 44691b25ac741370f299673f619d0e94 187 Gene3D G3DSA:3.40.50.1000 6 177 4.2E-57 T 22-04-2016 IPR023214 HAD-like domain JE55_RS11710 44691b25ac741370f299673f619d0e94 187 PANTHER PTHR23133:SF7 1 181 4.2E-72 T 22-04-2016 JE55_RS11710 44691b25ac741370f299673f619d0e94 187 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 8 150 2.8E-36 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA JE55_RS11710 44691b25ac741370f299673f619d0e94 187 SUPERFAMILY SSF56784 5 174 1.63E-47 T 22-04-2016 IPR023214 HAD-like domain JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 PRINTS PR01050 Pyruvate kinase family signature 296 314 1.1E-56 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 PRINTS PR01050 Pyruvate kinase family signature 271 295 1.1E-56 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 PRINTS PR01050 Pyruvate kinase family signature 185 199 1.1E-56 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 PRINTS PR01050 Pyruvate kinase family signature 219 245 1.1E-56 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 PRINTS PR01050 Pyruvate kinase family signature 60 76 1.1E-56 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 PRINTS PR01050 Pyruvate kinase family signature 246 270 1.1E-56 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 PRINTS PR01050 Pyruvate kinase family signature 315 331 1.1E-56 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 SUPERFAMILY SSF52935 349 475 1.83E-38 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 472 1.9E-30 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 Gene3D G3DSA:2.40.33.10 74 167 6.4E-28 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 SUPERFAMILY SSF50800 71 164 1.05E-24 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 474 7.0E-157 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 PANTHER PTHR11817:SF17 1 476 1.4E-234 T 22-04-2016 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 PANTHER PTHR11817 1 476 1.4E-234 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 Pfam PF00224 Pyruvate kinase, barrel domain 3 340 2.6E-117 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 Gene3D G3DSA:3.20.20.60 168 328 1.9E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 Gene3D G3DSA:3.20.20.60 3 73 1.9E-94 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 Gene3D G3DSA:3.40.1380.20 329 474 3.8E-38 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 SUPERFAMILY SSF51621 166 340 9.77E-90 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS12275 90734ef4cf0456ade708a344d363c6cc 478 SUPERFAMILY SSF51621 2 76 9.77E-90 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 14 797 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 SUPERFAMILY SSF51621 473 797 2.88E-92 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 489 797 1.2E-58 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 Pfam PF00391 PEP-utilising enzyme, mobile domain 392 463 6.0E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 Gene3D G3DSA:3.30.1490.20 12 202 6.4E-68 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 Gene3D G3DSA:3.30.470.20 205 365 1.2E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 SUPERFAMILY SSF52009 356 475 5.62E-34 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 PANTHER PTHR22931 1 796 0.0 T 22-04-2016 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 PIRSF PIRSF000854 8 799 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 Gene3D G3DSA:3.20.20.60 489 797 9.1E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 422 433 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 702 720 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 PANTHER PTHR22931:SF7 1 796 0.0 T 22-04-2016 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 26 351 4.6E-117 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 Gene3D G3DSA:3.50.30.10 381 482 9.3E-37 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS01095 a7ce3e06eb84fff688b22990a95cec1c 799 SUPERFAMILY SSF56059 11 393 3.3E-109 T 22-04-2016 JE55_RS11760 00de44b9961d2b19020d87ff8e7745d5 310 PANTHER PTHR30537 1 300 1.5E-103 T 22-04-2016 JE55_RS11760 00de44b9961d2b19020d87ff8e7745d5 310 Gene3D G3DSA:1.10.10.10 3 86 4.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11760 00de44b9961d2b19020d87ff8e7745d5 310 Gene3D G3DSA:3.40.190.10 92 175 2.6E-22 T 22-04-2016 JE55_RS11760 00de44b9961d2b19020d87ff8e7745d5 310 SUPERFAMILY SSF46785 3 112 7.65E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11760 00de44b9961d2b19020d87ff8e7745d5 310 PANTHER PTHR30537:SF5 1 300 1.5E-103 T 22-04-2016 JE55_RS11760 00de44b9961d2b19020d87ff8e7745d5 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS11760 00de44b9961d2b19020d87ff8e7745d5 310 SUPERFAMILY SSF53850 90 298 9.93E-41 T 22-04-2016 JE55_RS11760 00de44b9961d2b19020d87ff8e7745d5 310 Pfam PF03466 LysR substrate binding domain 90 295 1.9E-38 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS11760 00de44b9961d2b19020d87ff8e7745d5 310 Gene3D G3DSA:3.40.190.10 176 263 1.8E-17 T 22-04-2016 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 PANTHER PTHR23115:SF66 309 699 0.0 T 22-04-2016 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 PANTHER PTHR23115:SF66 6 184 0.0 T 22-04-2016 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 Gene3D G3DSA:3.30.70.240 603 700 1.7E-34 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain JE55_RS12800 35dce7a582b803d313185988faa515f4 704 PANTHER PTHR23115 262 290 0.0 T 22-04-2016 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 SUPERFAMILY SSF54980 609 698 2.05E-31 T 22-04-2016 IPR009022 Elongation factor G, III-V domain JE55_RS12800 35dce7a582b803d313185988faa515f4 704 SUPERFAMILY SSF52540 6 289 1.59E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12800 35dce7a582b803d313185988faa515f4 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 699 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site JE55_RS12800 35dce7a582b803d313185988faa515f4 704 Gene3D G3DSA:2.40.30.10 311 411 1.4E-38 T 22-04-2016 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 Gene3D G3DSA:3.30.230.10 490 602 2.2E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS12800 35dce7a582b803d313185988faa515f4 704 PANTHER PTHR23115:SF66 262 290 0.0 T 22-04-2016 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 Pfam PF03764 Elongation factor G, domain IV 485 604 1.3E-46 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 Gene3D G3DSA:3.40.50.300 6 294 2.7E-103 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12800 35dce7a582b803d313185988faa515f4 704 Gene3D G3DSA:3.30.70.870 412 486 1.3E-39 T 22-04-2016 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 Pfam PF00679 Elongation factor G C-terminus 606 693 6.4E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain JE55_RS12800 35dce7a582b803d313185988faa515f4 704 PANTHER PTHR23115 309 699 0.0 T 22-04-2016 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 PANTHER PTHR23115 6 184 0.0 T 22-04-2016 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 Pfam PF14492 Elongation Factor G, domain II 410 484 8.6E-36 T 22-04-2016 IPR009022 Elongation factor G, III-V domain JE55_RS12800 35dce7a582b803d313185988faa515f4 704 SUPERFAMILY SSF54980 410 487 6.83E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain JE55_RS12800 35dce7a582b803d313185988faa515f4 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 289 2.3E-67 T 22-04-2016 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 1.9E-31 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 699 110.98 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 SMART SM00838 606 695 7.9E-55 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain JE55_RS12800 35dce7a582b803d313185988faa515f4 704 Pfam PF03144 Elongation factor Tu domain 2 330 397 8.7E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 SUPERFAMILY SSF54211 485 605 2.4E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS12800 35dce7a582b803d313185988faa515f4 704 SMART SM00889 486 604 5.8E-71 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 JE55_RS12800 35dce7a582b803d313185988faa515f4 704 SUPERFAMILY SSF50447 272 410 3.09E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS16080 738dde69275c86706f44e7c0629f4549 644 Gene3D G3DSA:1.20.1250.20 28 222 5.3E-9 T 22-04-2016 JE55_RS16080 738dde69275c86706f44e7c0629f4549 644 Gene3D G3DSA:1.20.1250.20 241 441 7.7E-10 T 22-04-2016 JE55_RS16080 738dde69275c86706f44e7c0629f4549 644 SUPERFAMILY SSF69593 416 628 3.53E-31 T 22-04-2016 JE55_RS16080 738dde69275c86706f44e7c0629f4549 644 PANTHER PTHR10434:SF15 363 640 1.0E-113 T 22-04-2016 JE55_RS16080 738dde69275c86706f44e7c0629f4549 644 Pfam PF01553 Acyltransferase 462 586 9.8E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 JE55_RS16080 738dde69275c86706f44e7c0629f4549 644 SMART SM00563 473 589 1.7E-29 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 JE55_RS16080 738dde69275c86706f44e7c0629f4549 644 PANTHER PTHR10434 363 640 1.0E-113 T 22-04-2016 JE55_RS16080 738dde69275c86706f44e7c0629f4549 644 Gene3D G3DSA:3.40.1130.10 457 586 4.0E-17 T 22-04-2016 JE55_RS16080 738dde69275c86706f44e7c0629f4549 644 Pfam PF07690 Major Facilitator Superfamily 36 404 2.1E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS16080 738dde69275c86706f44e7c0629f4549 644 SUPERFAMILY SSF103473 15 442 3.01E-29 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS07605 620bc43b154fc6e55893036e00f85370 406 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 44 86 1.6E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger JE55_RS07605 620bc43b154fc6e55893036e00f85370 406 PANTHER PTHR33498:SF1 39 393 6.0E-48 T 22-04-2016 JE55_RS07605 620bc43b154fc6e55893036e00f85370 406 Pfam PF01610 Transposase 157 397 3.3E-66 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JE55_RS07605 620bc43b154fc6e55893036e00f85370 406 PANTHER PTHR33498 39 393 6.0E-48 T 22-04-2016 JE55_RS07605 620bc43b154fc6e55893036e00f85370 406 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 139 1.1E-11 T 22-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain JE55_RS12305 d6a86b545baa575f0b1d983ee6487561 379 PANTHER PTHR22835 46 368 6.1E-23 T 22-04-2016 JE55_RS12305 d6a86b545baa575f0b1d983ee6487561 379 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 56 367 1.1E-8 T 22-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 JE55_RS12305 d6a86b545baa575f0b1d983ee6487561 379 SUPERFAMILY SSF52266 344 372 1.69E-9 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS12305 d6a86b545baa575f0b1d983ee6487561 379 SUPERFAMILY SSF52266 54 294 1.69E-9 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS12305 d6a86b545baa575f0b1d983ee6487561 379 Gene3D G3DSA:3.40.50.1110 54 375 1.1E-69 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS12305 d6a86b545baa575f0b1d983ee6487561 379 PANTHER PTHR22835:SF222 46 368 6.1E-23 T 22-04-2016 JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 113 193 4.6E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 PANTHER PTHR18901:SF14 1 221 1.9E-48 T 22-04-2016 JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 Gene3D G3DSA:3.40.50.1000 95 228 5.8E-42 T 22-04-2016 IPR023214 HAD-like domain JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 Gene3D G3DSA:3.40.50.1000 10 28 5.8E-42 T 22-04-2016 IPR023214 HAD-like domain JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 1.4E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 1.4E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 1.4E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 Gene3D G3DSA:1.10.150.240 29 94 5.2E-11 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 PANTHER PTHR18901 1 221 1.9E-48 T 22-04-2016 JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 199 1.8E-32 T 22-04-2016 IPR023214 HAD-like domain JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 16 223 9.5E-61 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 SUPERFAMILY SSF56784 12 222 1.29E-53 T 22-04-2016 IPR023214 HAD-like domain JE55_RS06445 ac33191de555d0e4f36574b03b5db8fa 242 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 82 197 4.3E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS06945 f8355b1abd102041f9beb54f21131fbb 175 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 139 15.541 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 JE55_RS06945 f8355b1abd102041f9beb54f21131fbb 175 Pfam PF02416 mttA/Hcf106 family 4 34 2.9E-7 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 JE55_RS06945 f8355b1abd102041f9beb54f21131fbb 175 PANTHER PTHR33162 1 69 8.2E-15 T 22-04-2016 JE55_RS06945 f8355b1abd102041f9beb54f21131fbb 175 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.9E-13 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 JE55_RS06945 f8355b1abd102041f9beb54f21131fbb 175 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.9E-13 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 JE55_RS06945 f8355b1abd102041f9beb54f21131fbb 175 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.9E-13 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 JE55_RS06945 f8355b1abd102041f9beb54f21131fbb 175 PANTHER PTHR33162:SF4 1 69 8.2E-15 T 22-04-2016 JE55_RS06945 f8355b1abd102041f9beb54f21131fbb 175 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 3 76 3.3E-18 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 JE55_RS15800 178aa70e2ffc071620fcc8e786429644 468 Gene3D G3DSA:1.10.760.10 91 278 4.0E-36 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS15800 178aa70e2ffc071620fcc8e786429644 468 Gene3D G3DSA:1.10.760.10 279 458 3.8E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS15800 178aa70e2ffc071620fcc8e786429644 468 SUPERFAMILY SSF46626 356 454 8.64E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS15800 178aa70e2ffc071620fcc8e786429644 468 SUPERFAMILY SSF46626 259 325 8.64E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS15800 178aa70e2ffc071620fcc8e786429644 468 PANTHER PTHR30600 94 393 6.9E-81 T 22-04-2016 JE55_RS15800 178aa70e2ffc071620fcc8e786429644 468 PANTHER PTHR30600 428 463 6.9E-81 T 22-04-2016 JE55_RS15800 178aa70e2ffc071620fcc8e786429644 468 Pfam PF03150 Di-haem cytochrome c peroxidase 94 275 8.8E-36 T 22-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 JE55_RS15800 178aa70e2ffc071620fcc8e786429644 468 PANTHER PTHR30600:SF5 94 393 6.9E-81 T 22-04-2016 JE55_RS15800 178aa70e2ffc071620fcc8e786429644 468 PANTHER PTHR30600:SF5 428 463 6.9E-81 T 22-04-2016 JE55_RS15800 178aa70e2ffc071620fcc8e786429644 468 SUPERFAMILY SSF46626 93 255 8.9E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14125 dc489e1cd18e53943a81ddbe702d332b 156 Gene3D G3DSA:3.40.1280.10 1 155 1.6E-56 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS14125 dc489e1cd18e53943a81ddbe702d332b 156 PIRSF PIRSF004505 1 155 4.1E-48 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS14125 dc489e1cd18e53943a81ddbe702d332b 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 5.9E-51 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS14125 dc489e1cd18e53943a81ddbe702d332b 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 5.9E-49 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS14125 dc489e1cd18e53943a81ddbe702d332b 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 29.163 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS14125 dc489e1cd18e53943a81ddbe702d332b 156 PANTHER PTHR33603:SF1 1 155 4.1E-59 T 22-04-2016 JE55_RS14125 dc489e1cd18e53943a81ddbe702d332b 156 SUPERFAMILY SSF75217 1 153 3.14E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases JE55_RS14125 dc489e1cd18e53943a81ddbe702d332b 156 PANTHER PTHR33603 1 155 4.1E-59 T 22-04-2016 JE55_RS08515 085fa3df125b349af01c9ba98f96c0da 294 PANTHER PTHR11795:SF379 1 293 2.9E-123 T 22-04-2016 JE55_RS08515 085fa3df125b349af01c9ba98f96c0da 294 Pfam PF02653 Branched-chain amino acid transport system / permease component 16 282 3.6E-42 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS08515 085fa3df125b349af01c9ba98f96c0da 294 PANTHER PTHR11795 1 293 2.9E-123 T 22-04-2016 JE55_RS02560 79d9967636e9e25da1f51eb51abefb20 229 SUPERFAMILY SSF51206 10 142 1.96E-33 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like JE55_RS02560 79d9967636e9e25da1f51eb51abefb20 229 Pfam PF13545 Crp-like helix-turn-helix domain 155 224 5.9E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JE55_RS02560 79d9967636e9e25da1f51eb51abefb20 229 PANTHER PTHR24567:SF30 8 228 4.5E-38 T 22-04-2016 JE55_RS02560 79d9967636e9e25da1f51eb51abefb20 229 SMART SM00100 17 135 8.6E-18 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain JE55_RS02560 79d9967636e9e25da1f51eb51abefb20 229 Gene3D G3DSA:2.60.120.10 13 149 3.1E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS02560 79d9967636e9e25da1f51eb51abefb20 229 SUPERFAMILY SSF46785 154 226 2.72E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02560 79d9967636e9e25da1f51eb51abefb20 229 PANTHER PTHR24567 8 228 4.5E-38 T 22-04-2016 JE55_RS02560 79d9967636e9e25da1f51eb51abefb20 229 Pfam PF00027 Cyclic nucleotide-binding domain 36 121 2.0E-18 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain JE55_RS02560 79d9967636e9e25da1f51eb51abefb20 229 SMART SM00419 171 219 0.003 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JE55_RS02560 79d9967636e9e25da1f51eb51abefb20 229 Gene3D G3DSA:1.10.10.10 155 225 5.2E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12025 c84c14f6a3e3671037401cba3edd3ff7 378 Pfam PF00034 Cytochrome c 291 377 1.5E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12025 c84c14f6a3e3671037401cba3edd3ff7 378 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 82 275 8.9E-46 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 JE55_RS12025 c84c14f6a3e3671037401cba3edd3ff7 378 PANTHER PTHR22888 25 310 1.0E-51 T 22-04-2016 JE55_RS12025 c84c14f6a3e3671037401cba3edd3ff7 378 Gene3D G3DSA:2.60.40.420 163 278 2.5E-35 T 22-04-2016 IPR008972 Cupredoxin JE55_RS12025 c84c14f6a3e3671037401cba3edd3ff7 378 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 211 259 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 JE55_RS12025 c84c14f6a3e3671037401cba3edd3ff7 378 Gene3D G3DSA:1.10.760.10 279 377 6.9E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12025 c84c14f6a3e3671037401cba3edd3ff7 378 SUPERFAMILY SSF46626 142 157 1.98E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12025 c84c14f6a3e3671037401cba3edd3ff7 378 SUPERFAMILY SSF46626 285 377 1.98E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12025 c84c14f6a3e3671037401cba3edd3ff7 378 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 190 263 5.0E-18 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 JE55_RS12025 c84c14f6a3e3671037401cba3edd3ff7 378 SUPERFAMILY SSF49503 159 327 5.48E-46 T 22-04-2016 IPR008972 Cupredoxin JE55_RS07700 62a6c59ef2c1bb36b8a434a26a00e074 919 Gene3D G3DSA:3.40.50.150 476 572 3.8E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS07700 62a6c59ef2c1bb36b8a434a26a00e074 919 Gene3D G3DSA:3.40.50.150 338 443 3.8E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS07700 62a6c59ef2c1bb36b8a434a26a00e074 919 PANTHER PTHR33841 86 902 4.1E-98 T 22-04-2016 JE55_RS07700 62a6c59ef2c1bb36b8a434a26a00e074 919 PANTHER PTHR33841:SF3 86 902 4.1E-98 T 22-04-2016 JE55_RS07700 62a6c59ef2c1bb36b8a434a26a00e074 919 SUPERFAMILY SSF53335 481 598 2.17E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS07700 62a6c59ef2c1bb36b8a434a26a00e074 919 SUPERFAMILY SSF53335 167 448 2.17E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS13380 11d3f979db49128e2efb940bc825b46c 396 Gene3D G3DSA:1.25.40.10 84 290 2.6E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS13380 11d3f979db49128e2efb940bc825b46c 396 Gene3D G3DSA:1.25.40.10 322 389 2.6E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS13380 11d3f979db49128e2efb940bc825b46c 396 SUPERFAMILY SSF48452 307 388 8.35E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS13380 11d3f979db49128e2efb940bc825b46c 396 SMART SM00028 86 119 89.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS13380 11d3f979db49128e2efb940bc825b46c 396 SMART SM00028 363 396 77.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS13380 11d3f979db49128e2efb940bc825b46c 396 SMART SM00028 326 359 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS13380 11d3f979db49128e2efb940bc825b46c 396 Pfam PF13424 Tetratricopeptide repeat 327 389 7.6E-8 T 22-04-2016 JE55_RS13380 11d3f979db49128e2efb940bc825b46c 396 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 389 2.0E-136 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 JE55_RS13380 11d3f979db49128e2efb940bc825b46c 396 Pfam PF07219 HemY protein N-terminus 28 133 3.8E-29 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 SMART SM00382 35 221 3.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 SMART SM00382 374 536 1.7E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 SUPERFAMILY SSF52540 370 531 7.64E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 PANTHER PTHR19211:SF6 287 530 1.4E-144 T 22-04-2016 JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 PANTHER PTHR19211:SF6 11 260 1.4E-144 T 22-04-2016 JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 SUPERFAMILY SSF52540 14 224 1.15E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 PANTHER PTHR19211 287 530 1.4E-144 T 22-04-2016 JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 PANTHER PTHR19211 11 260 1.4E-144 T 22-04-2016 JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 Pfam PF00005 ABC transporter 370 495 2.0E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 Pfam PF00005 ABC transporter 40 179 2.3E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 Gene3D G3DSA:3.40.50.300 10 265 6.9E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10345 3c1a65d3e8edf367ad2732b9cb05ac43 548 Gene3D G3DSA:3.40.50.300 376 530 6.4E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10810 60e9117c5e80d139875b34884552cfdb 272 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 26 270 2.9E-84 T 22-04-2016 IPR004872 Lipoprotein NlpA family JE55_RS10810 60e9117c5e80d139875b34884552cfdb 272 Pfam PF03180 NLPA lipoprotein 33 270 7.6E-99 T 22-04-2016 IPR004872 Lipoprotein NlpA family JE55_RS10810 60e9117c5e80d139875b34884552cfdb 272 Gene3D G3DSA:3.40.190.10 30 161 4.9E-59 T 22-04-2016 JE55_RS10810 60e9117c5e80d139875b34884552cfdb 272 PIRSF PIRSF002854 1 272 3.2E-110 T 22-04-2016 IPR004872 Lipoprotein NlpA family JE55_RS10810 60e9117c5e80d139875b34884552cfdb 272 SUPERFAMILY SSF53850 33 271 3.26E-89 T 22-04-2016 JE55_RS10810 60e9117c5e80d139875b34884552cfdb 272 PANTHER PTHR30429 1 272 4.1E-134 T 22-04-2016 IPR004872 Lipoprotein NlpA family JE55_RS03350 031053a210cdb19be4cd84d71b1f58c6 236 PANTHER PTHR39168:SF1 8 236 6.3E-61 T 22-04-2016 JE55_RS03350 031053a210cdb19be4cd84d71b1f58c6 236 SMART SM00418 15 94 9.3E-16 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 JE55_RS03350 031053a210cdb19be4cd84d71b1f58c6 236 SUPERFAMILY SSF46785 10 94 3.86E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03350 031053a210cdb19be4cd84d71b1f58c6 236 Gene3D G3DSA:1.10.10.10 7 98 4.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03350 031053a210cdb19be4cd84d71b1f58c6 236 Pfam PF12840 Helix-turn-helix domain 19 73 9.1E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03350 031053a210cdb19be4cd84d71b1f58c6 236 PANTHER PTHR39168 8 236 6.3E-61 T 22-04-2016 JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 SUPERFAMILY SSF55920 339 592 4.58E-51 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 Gene3D G3DSA:3.90.230.10 338 593 1.1E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 PANTHER PTHR10804:SF86 26 209 4.0E-67 T 22-04-2016 JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 PANTHER PTHR10804:SF86 319 601 4.0E-67 T 22-04-2016 JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 Pfam PF16189 Creatinase/Prolidase N-terminal domain 183 340 2.9E-10 T 22-04-2016 JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 Pfam PF16188 C-terminal region of peptidase_M24 567 606 1.6E-7 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 PANTHER PTHR10804 26 209 4.0E-67 T 22-04-2016 JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 PANTHER PTHR10804 319 601 4.0E-67 T 22-04-2016 JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 Pfam PF01321 Creatinase/Prolidase N-terminal domain 26 158 4.1E-9 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 505 517 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 Pfam PF00557 Metallopeptidase family M24 345 559 1.9E-43 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS14600 cb32ec7e1d25a2e81128ffc6becf4a85 616 Gene3D G3DSA:3.40.350.10 28 156 1.5E-7 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JE55_RS16650 b6120e4c5ea96bfa6ba307338ada0d98 273 Gene3D G3DSA:1.10.3720.10 67 260 7.2E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16650 b6120e4c5ea96bfa6ba307338ada0d98 273 SUPERFAMILY SSF161098 67 250 1.83E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16650 b6120e4c5ea96bfa6ba307338ada0d98 273 PANTHER PTHR30151:SF22 18 272 6.2E-148 T 22-04-2016 JE55_RS16650 b6120e4c5ea96bfa6ba307338ada0d98 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 260 1.2E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16650 b6120e4c5ea96bfa6ba307338ada0d98 273 PANTHER PTHR30151 18 272 6.2E-148 T 22-04-2016 JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 SMART SM00421 158 215 1.9E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 SUPERFAMILY SSF52172 9 132 3.98E-18 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 215 1.8E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 Gene3D G3DSA:3.40.50.2300 7 163 6.1E-22 T 22-04-2016 JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 PANTHER PTHR26402 9 221 1.0E-36 T 22-04-2016 JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 SUPERFAMILY SSF46894 153 221 5.1E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 Gene3D G3DSA:1.10.10.10 164 221 1.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 5.3E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 5.3E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 5.3E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 SMART SM00448 9 126 6.5E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 PANTHER PTHR26402:SF458 9 221 1.0E-36 T 22-04-2016 JE55_RS17745 8892c2357a36705cf831ff61444c5980 221 Pfam PF00072 Response regulator receiver domain 11 122 4.7E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS08625 89a96b1f83cc9fc9d2d51e17f6f33804 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 JE55_RS08625 89a96b1f83cc9fc9d2d51e17f6f33804 92 SMART SM00411 1 90 2.1E-39 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS08625 89a96b1f83cc9fc9d2d51e17f6f33804 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.4E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS08625 89a96b1f83cc9fc9d2d51e17f6f33804 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.4E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS08625 89a96b1f83cc9fc9d2d51e17f6f33804 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.4E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS08625 89a96b1f83cc9fc9d2d51e17f6f33804 92 Gene3D G3DSA:4.10.520.10 1 91 1.3E-37 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 JE55_RS08625 89a96b1f83cc9fc9d2d51e17f6f33804 92 SUPERFAMILY SSF47729 1 90 3.68E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 JE55_RS08625 89a96b1f83cc9fc9d2d51e17f6f33804 92 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.4E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS08625 89a96b1f83cc9fc9d2d51e17f6f33804 92 PANTHER PTHR33175 1 90 6.1E-39 T 22-04-2016 JE55_RS11570 ab7490869795416d813bb12b4ab29a41 215 PANTHER PTHR38693 1 207 1.9E-18 T 22-04-2016 JE55_RS11570 ab7490869795416d813bb12b4ab29a41 215 PANTHER PTHR38693:SF1 1 207 1.9E-18 T 22-04-2016 JE55_RS11570 ab7490869795416d813bb12b4ab29a41 215 Pfam PF02036 SCP-2 sterol transfer family 12 113 8.5E-13 T 22-04-2016 IPR003033 SCP2 sterol-binding domain JE55_RS00565 112c4a2738b27f9fd3945e192a685e22 348 PANTHER PTHR22602:SF0 38 266 2.4E-37 T 22-04-2016 JE55_RS00565 112c4a2738b27f9fd3945e192a685e22 348 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 207 271 2.9E-24 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site JE55_RS00565 112c4a2738b27f9fd3945e192a685e22 348 SUPERFAMILY SSF103025 26 262 2.83E-58 T 22-04-2016 JE55_RS00565 112c4a2738b27f9fd3945e192a685e22 348 Pfam PF01571 Aminomethyltransferase folate-binding domain 43 137 2.1E-6 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal JE55_RS00565 112c4a2738b27f9fd3945e192a685e22 348 PANTHER PTHR22602 38 266 2.4E-37 T 22-04-2016 JE55_RS00565 112c4a2738b27f9fd3945e192a685e22 348 Gene3D G3DSA:3.30.70.1400 44 129 1.6E-30 T 22-04-2016 JE55_RS13010 08a63b8d0fb8511c8999a7916997bfe2 320 Gene3D G3DSA:1.10.10.10 7 85 7.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13010 08a63b8d0fb8511c8999a7916997bfe2 320 Gene3D G3DSA:3.40.190.10 94 178 2.2E-27 T 22-04-2016 JE55_RS13010 08a63b8d0fb8511c8999a7916997bfe2 320 PANTHER PTHR30537:SF12 1 311 1.0E-132 T 22-04-2016 JE55_RS13010 08a63b8d0fb8511c8999a7916997bfe2 320 SUPERFAMILY SSF53850 92 295 1.43E-41 T 22-04-2016 JE55_RS13010 08a63b8d0fb8511c8999a7916997bfe2 320 Gene3D G3DSA:3.40.190.10 179 258 6.9E-10 T 22-04-2016 JE55_RS13010 08a63b8d0fb8511c8999a7916997bfe2 320 Pfam PF03466 LysR substrate binding domain 91 294 1.1E-40 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS13010 08a63b8d0fb8511c8999a7916997bfe2 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 1.2E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13010 08a63b8d0fb8511c8999a7916997bfe2 320 PANTHER PTHR30537 1 311 1.0E-132 T 22-04-2016 JE55_RS13010 08a63b8d0fb8511c8999a7916997bfe2 320 SUPERFAMILY SSF46785 8 87 5.67E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13785 07fff3de20d89229c84e339e8ddc48f2 317 PANTHER PTHR10683 1 315 6.2E-179 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 JE55_RS13785 07fff3de20d89229c84e339e8ddc48f2 317 Gene3D G3DSA:3.20.20.70 2 315 1.9E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS13785 07fff3de20d89229c84e339e8ddc48f2 317 PANTHER PTHR10683:SF18 1 315 6.2E-179 T 22-04-2016 JE55_RS13785 07fff3de20d89229c84e339e8ddc48f2 317 TIGRFAM TIGR00874 talAB: transaldolase 4 315 7.9E-140 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 JE55_RS13785 07fff3de20d89229c84e339e8ddc48f2 317 Pfam PF00923 Transaldolase 14 313 5.7E-96 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 JE55_RS13785 07fff3de20d89229c84e339e8ddc48f2 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 JE55_RS13785 07fff3de20d89229c84e339e8ddc48f2 317 ProSitePatterns PS00958 Transaldolase active site. 123 140 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 JE55_RS13785 07fff3de20d89229c84e339e8ddc48f2 317 SUPERFAMILY SSF51569 1 316 4.19E-112 T 22-04-2016 JE55_RS13785 07fff3de20d89229c84e339e8ddc48f2 317 Hamap MF_00492 Transaldolase [tal]. 2 317 48.962 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 JE55_RS09815 6bb69d741cbaf3fe7603f6d15fa8bdbc 410 SUPERFAMILY SSF64518 1 408 1.27E-69 T 22-04-2016 JE55_RS09815 6bb69d741cbaf3fe7603f6d15fa8bdbc 410 PANTHER PTHR30244:SF5 236 409 6.7E-60 T 22-04-2016 JE55_RS09815 6bb69d741cbaf3fe7603f6d15fa8bdbc 410 PANTHER PTHR30244:SF5 1 185 6.7E-60 T 22-04-2016 JE55_RS09815 6bb69d741cbaf3fe7603f6d15fa8bdbc 410 PANTHER PTHR30244 236 409 6.7E-60 T 22-04-2016 JE55_RS09815 6bb69d741cbaf3fe7603f6d15fa8bdbc 410 PANTHER PTHR30244 1 185 6.7E-60 T 22-04-2016 JE55_RS09815 6bb69d741cbaf3fe7603f6d15fa8bdbc 410 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 138 7.4E-18 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JE55_RS09815 6bb69d741cbaf3fe7603f6d15fa8bdbc 410 Gene3D G3DSA:1.20.1330.10 313 365 1.6E-18 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JE55_RS09815 6bb69d741cbaf3fe7603f6d15fa8bdbc 410 Gene3D G3DSA:1.20.1330.10 54 168 1.6E-18 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JE55_RS09815 6bb69d741cbaf3fe7603f6d15fa8bdbc 410 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 408 8.4E-112 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 JE55_RS01380 319c5f38271b5eab4a9f85a7dcc21de1 135 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 127 1.4E-18 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like JE55_RS01380 319c5f38271b5eab4a9f85a7dcc21de1 135 Gene3D G3DSA:3.10.490.10 1 133 5.4E-29 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like JE55_RS01380 319c5f38271b5eab4a9f85a7dcc21de1 135 SUPERFAMILY SSF110857 1 133 2.22E-29 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like JE55_RS05600 084eda8e27b128a404ffde17e5a873ed 387 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 9 387 39.372 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 JE55_RS05600 084eda8e27b128a404ffde17e5a873ed 387 Pfam PF03702 Uncharacterised protein family (UPF0075) 10 386 7.9E-129 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 JE55_RS05600 084eda8e27b128a404ffde17e5a873ed 387 Gene3D G3DSA:3.30.420.40 149 346 1.7E-69 T 22-04-2016 JE55_RS05600 084eda8e27b128a404ffde17e5a873ed 387 PANTHER PTHR30605:SF0 3 386 4.6E-133 T 22-04-2016 JE55_RS05600 084eda8e27b128a404ffde17e5a873ed 387 SUPERFAMILY SSF53067 147 359 2.16E-22 T 22-04-2016 JE55_RS05600 084eda8e27b128a404ffde17e5a873ed 387 SUPERFAMILY SSF53067 72 117 2.16E-22 T 22-04-2016 JE55_RS05600 084eda8e27b128a404ffde17e5a873ed 387 PANTHER PTHR30605 3 386 4.6E-133 T 22-04-2016 JE55_RS30760 a6ab400c547458942b52cd648580ef77 301 PANTHER PTHR30344 36 301 8.4E-76 T 22-04-2016 JE55_RS30760 a6ab400c547458942b52cd648580ef77 301 PANTHER PTHR30344:SF1 36 301 8.4E-76 T 22-04-2016 JE55_RS30760 a6ab400c547458942b52cd648580ef77 301 SUPERFAMILY SSF50974 35 290 2.14E-35 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal JE55_RS30760 a6ab400c547458942b52cd648580ef77 301 Gene3D G3DSA:2.130.10.10 37 301 3.0E-77 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 JE55_RS30760 a6ab400c547458942b52cd648580ef77 301 Pfam PF10282 Lactonase, 7-bladed beta-propeller 39 301 4.7E-78 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 PRINTS PR01607 Apyrase family signature 569 588 2.4E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 PRINTS PR01607 Apyrase family signature 335 355 2.4E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 PRINTS PR01607 Apyrase family signature 291 314 2.4E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 PRINTS PR01607 Apyrase family signature 479 502 2.4E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 PRINTS PR01607 Apyrase family signature 47 65 2.4E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 PRINTS PR01607 Apyrase family signature 263 280 2.4E-27 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 SUPERFAMILY SSF55816 405 627 8.76E-41 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 SUPERFAMILY SSF56300 47 404 3.08E-74 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 PANTHER PTHR11575:SF6 48 685 1.3E-168 T 22-04-2016 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 Pfam PF02872 5'-nucleotidase, C-terminal domain 408 594 1.8E-25 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 Gene3D G3DSA:3.90.780.10 407 627 1.2E-43 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 PANTHER PTHR11575 48 685 1.3E-168 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 ProSitePatterns PS00786 5'-nucleotidase signature 2. 135 146 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 JE55_RS10465 a78a9b57041a70d3ec3ce00c3aa1074e 686 Gene3D G3DSA:3.60.21.10 41 405 2.0E-79 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS02600 13a4d521f98a04bd6c5e52884c453eee 163 SUPERFAMILY SSF82649 15 150 2.51E-46 T 22-04-2016 JE55_RS02600 13a4d521f98a04bd6c5e52884c453eee 163 Pfam PF01592 NifU-like N terminal domain 18 136 1.2E-22 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 JE55_RS02600 13a4d521f98a04bd6c5e52884c453eee 163 PANTHER PTHR10093 7 149 4.0E-32 T 22-04-2016 JE55_RS02600 13a4d521f98a04bd6c5e52884c453eee 163 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 16 148 9.6E-43 T 22-04-2016 JE55_RS02600 13a4d521f98a04bd6c5e52884c453eee 163 Gene3D G3DSA:3.90.1010.10 17 150 3.9E-39 T 22-04-2016 JE55_RS16340 6c8c3ccd74aa09935615365f2c13927e 498 PANTHER PTHR30203:SF6 12 491 3.5E-117 T 22-04-2016 JE55_RS16340 6c8c3ccd74aa09935615365f2c13927e 498 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 16 472 4.1E-122 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 JE55_RS16340 6c8c3ccd74aa09935615365f2c13927e 498 PANTHER PTHR30203 12 491 3.5E-117 T 22-04-2016 JE55_RS16340 6c8c3ccd74aa09935615365f2c13927e 498 Pfam PF02321 Outer membrane efflux protein 72 261 2.0E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS16340 6c8c3ccd74aa09935615365f2c13927e 498 Pfam PF02321 Outer membrane efflux protein 285 470 9.3E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS16340 6c8c3ccd74aa09935615365f2c13927e 498 Gene3D G3DSA:2.20.200.10 106 148 3.1E-24 T 22-04-2016 JE55_RS16340 6c8c3ccd74aa09935615365f2c13927e 498 Gene3D G3DSA:2.20.200.10 322 357 3.1E-24 T 22-04-2016 JE55_RS16340 6c8c3ccd74aa09935615365f2c13927e 498 SUPERFAMILY SSF56954 7 474 1.44E-97 T 22-04-2016 JE55_RS16340 6c8c3ccd74aa09935615365f2c13927e 498 Gene3D G3DSA:1.20.1600.10 57 96 4.1E-88 T 22-04-2016 JE55_RS16340 6c8c3ccd74aa09935615365f2c13927e 498 Gene3D G3DSA:1.20.1600.10 149 321 4.1E-88 T 22-04-2016 JE55_RS16340 6c8c3ccd74aa09935615365f2c13927e 498 Gene3D G3DSA:1.20.1600.10 359 473 4.1E-88 T 22-04-2016 JE55_RS12675 206d4f5c6bdccfb9e07a8dc72c65ff31 280 PANTHER PTHR31350 28 276 3.7E-42 T 22-04-2016 JE55_RS12675 206d4f5c6bdccfb9e07a8dc72c65ff31 280 Gene3D G3DSA:1.25.40.10 186 261 3.5E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS12675 206d4f5c6bdccfb9e07a8dc72c65ff31 280 Pfam PF13369 Transglutaminase-like superfamily 39 194 7.8E-52 T 22-04-2016 IPR032698 Protein SirB1, N-terminal JE55_RS12675 206d4f5c6bdccfb9e07a8dc72c65ff31 280 PANTHER PTHR31350:SF1 28 276 3.7E-42 T 22-04-2016 JE55_RS12675 206d4f5c6bdccfb9e07a8dc72c65ff31 280 Pfam PF13371 Tetratricopeptide repeat 196 267 3.1E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS09710 0543aa2b2a1782567af1823bc645e79f 170 SUPERFAMILY SSF46785 23 157 4.71E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09710 0543aa2b2a1782567af1823bc645e79f 170 Gene3D G3DSA:1.10.10.10 20 155 1.7E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09710 0543aa2b2a1782567af1823bc645e79f 170 PIRSF PIRSF036158 1 170 5.3E-66 T 22-04-2016 IPR014601 Transcriptional regulator with MarR-type HTH domain JE55_RS09710 0543aa2b2a1782567af1823bc645e79f 170 Pfam PF13463 Winged helix DNA-binding domain 52 117 6.3E-21 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 SUPERFAMILY SSF81271 280 360 1.48E-35 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 PANTHER PTHR23305 1 364 2.5E-205 T 22-04-2016 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 4.8E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 Gene3D G3DSA:3.10.20.30 268 364 3.1E-49 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 PIRSF PIRSF006641 1 364 6.7E-154 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 SUPERFAMILY SSF52540 3 302 2.44E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 Gene3D G3DSA:3.40.50.300 202 267 6.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 Gene3D G3DSA:3.40.50.300 4 131 6.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 44.933 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 7.8E-156 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 Pfam PF01926 50S ribosome-binding GTPase 5 115 3.7E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS06510 fd29439b00d85e44b6c6050799960aed 364 Gene3D G3DSA:1.10.150.300 132 201 7.2E-26 T 22-04-2016 IPR023192 TGS-like domain JE55_RS05610 dc131e5fe331d89c85366565b622d304 234 Pfam PF02798 Glutathione S-transferase, N-terminal domain 5 74 8.7E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JE55_RS05610 dc131e5fe331d89c85366565b622d304 234 Gene3D G3DSA:3.40.30.10 2 81 1.9E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS05610 dc131e5fe331d89c85366565b622d304 234 PANTHER PTHR11260 9 198 1.7E-65 T 22-04-2016 JE55_RS05610 dc131e5fe331d89c85366565b622d304 234 Gene3D G3DSA:1.20.1050.10 82 197 7.6E-38 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS05610 dc131e5fe331d89c85366565b622d304 234 PANTHER PTHR11260:SF157 9 198 1.7E-65 T 22-04-2016 JE55_RS05610 dc131e5fe331d89c85366565b622d304 234 Pfam PF00043 Glutathione S-transferase, C-terminal domain 136 193 9.6E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal JE55_RS05610 dc131e5fe331d89c85366565b622d304 234 SUPERFAMILY SSF47616 71 198 6.26E-29 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS05610 dc131e5fe331d89c85366565b622d304 234 SUPERFAMILY SSF52833 4 78 1.21E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 Gene3D G3DSA:3.40.50.620 219 394 7.0E-57 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 SUPERFAMILY SSF52402 192 414 1.48E-58 T 22-04-2016 JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 539 54.184 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 Pfam PF02540 NAD synthase 216 249 1.4E-6 T 22-04-2016 IPR022310 NAD/GMP synthase JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 SUPERFAMILY SSF54810 400 539 7.72E-44 T 22-04-2016 JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 539 2.7E-140 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 PANTHER PTHR11922:SF2 1 536 1.0E-271 T 22-04-2016 JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 Gene3D G3DSA:3.40.50.880 2 218 2.1E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 Pfam PF00958 GMP synthase C terminal domain 453 538 3.8E-40 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 199 9.4E-69 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 PANTHER PTHR11922 1 536 1.0E-271 T 22-04-2016 JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 Gene3D G3DSA:3.30.300.10 396 539 1.4E-49 T 22-04-2016 JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 SUPERFAMILY SSF52317 1 232 2.75E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS01035 0971e5a46485e0fe0010ff02a02fe1b4 539 Pfam PF00117 Glutamine amidotransferase class-I 7 195 1.3E-31 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 JE55_RS08470 f256b8498ad0cf7c1d82643df43e6b9b 256 SUPERFAMILY SSF52540 1 254 1.95E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08470 f256b8498ad0cf7c1d82643df43e6b9b 256 PANTHER PTHR13696:SF52 1 254 3.0E-85 T 22-04-2016 JE55_RS08470 f256b8498ad0cf7c1d82643df43e6b9b 256 Gene3D G3DSA:3.40.50.300 3 254 1.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08470 f256b8498ad0cf7c1d82643df43e6b9b 256 PANTHER PTHR13696 1 254 3.0E-85 T 22-04-2016 JE55_RS08470 f256b8498ad0cf7c1d82643df43e6b9b 256 Pfam PF13614 AAA domain 3 178 1.2E-65 T 22-04-2016 IPR025669 AAA domain JE55_RS00145 6398f52b6ed1fab371adf3ef2ea7a243 209 PIRSF PIRSF006170 1 209 1.4E-54 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 JE55_RS00145 6398f52b6ed1fab371adf3ef2ea7a243 209 Pfam PF09976 Tetratricopeptide repeat-like domain 14 208 5.7E-65 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain JE55_RS00145 6398f52b6ed1fab371adf3ef2ea7a243 209 PANTHER PTHR38035 1 209 5.3E-35 T 22-04-2016 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 SUPERFAMILY SSF52540 203 463 4.51E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 Pfam PF00271 Helicase conserved C-terminal domain 239 332 3.1E-14 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 Pfam PF00570 HRDC domain 546 612 6.0E-24 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 SMART SM00956 412 519 1.5E-54 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 467 7.8E-149 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 613 6.4E-239 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 Gene3D G3DSA:1.10.10.10 346 522 7.1E-59 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 Pfam PF00270 DEAD/DEAH box helicase 21 180 1.1E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 PANTHER PTHR13710 1 613 4.8E-279 T 22-04-2016 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 SMART SM00490 251 332 1.5E-24 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 SMART SM00487 13 213 7.3E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 Gene3D G3DSA:1.10.150.80 545 612 3.9E-15 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 SUPERFAMILY SSF52540 5 200 1.45E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 Pfam PF09382 RQC domain 407 522 4.0E-40 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 SMART SM00341 542 615 2.8E-12 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 Gene3D G3DSA:3.40.50.300 201 345 5.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 PANTHER PTHR13710:SF81 1 613 4.8E-279 T 22-04-2016 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 Pfam PF16124 RecQ zinc-binding 344 405 5.8E-18 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 SUPERFAMILY SSF47819 539 614 4.14E-22 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 JE55_RS07415 f0b9f110d4b75f0f903fe51a03ae2c7b 615 Gene3D G3DSA:3.40.50.300 4 197 1.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 Gene3D G3DSA:2.30.38.10 349 421 1.2E-18 T 22-04-2016 JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 ProSitePatterns PS00012 Phosphopantetheine attachment site. 567 582 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 SMART SM00823 Phosphopantetheine attachment site 543 612 2.3E-10 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 Pfam PF00550 Phosphopantetheine attachment site 545 608 7.6E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 63 457 9.6E-97 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 Gene3D G3DSA:3.30.300.30 427 526 8.8E-34 T 22-04-2016 JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 Gene3D G3DSA:1.10.1200.10 531 608 6.4E-26 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 PANTHER PTHR24095 26 608 1.3E-139 T 22-04-2016 JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 PANTHER PTHR24095:SF137 26 608 1.3E-139 T 22-04-2016 JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 Gene3D G3DSA:3.40.50.980 37 201 1.6E-30 T 22-04-2016 JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 ProSitePatterns PS00455 Putative AMP-binding domain signature. 180 191 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 Gene3D G3DSA:3.40.50.980 202 348 4.5E-27 T 22-04-2016 JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 SUPERFAMILY SSF47336 537 608 2.09E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 Pfam PF00501 AMP-binding enzyme 42 433 5.2E-70 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 Pfam PF13193 AMP-binding enzyme C-terminal domain 441 516 7.9E-13 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS01610 0ea80e5529a558a8b7546779c70c8ade 612 SUPERFAMILY SSF56801 37 554 5.36E-124 T 22-04-2016 JE55_RS06485 2dfb012fc780f1c7c162945ddd32894f 609 PIRSF PIRSF016493 1 601 2.0E-223 T 22-04-2016 IPR024191 Peptidase M61 JE55_RS06485 2dfb012fc780f1c7c162945ddd32894f 609 SUPERFAMILY SSF55486 219 459 2.71E-10 T 22-04-2016 JE55_RS06485 2dfb012fc780f1c7c162945ddd32894f 609 SMART SM00228 474 564 2.3E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS06485 2dfb012fc780f1c7c162945ddd32894f 609 Pfam PF13180 PDZ domain 499 573 2.0E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS06485 2dfb012fc780f1c7c162945ddd32894f 609 PANTHER PTHR22939:SF73 509 581 2.0E-12 T 22-04-2016 JE55_RS06485 2dfb012fc780f1c7c162945ddd32894f 609 Pfam PF05299 M61 glycyl aminopeptidase 280 395 2.5E-48 T 22-04-2016 IPR007963 Peptidase M61, catalytic domain JE55_RS06485 2dfb012fc780f1c7c162945ddd32894f 609 PANTHER PTHR22939 509 581 2.0E-12 T 22-04-2016 JE55_RS06485 2dfb012fc780f1c7c162945ddd32894f 609 SUPERFAMILY SSF50156 496 578 1.31E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS06485 2dfb012fc780f1c7c162945ddd32894f 609 Gene3D G3DSA:2.30.42.10 508 574 3.2E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS01170 b14f5ee48bd4bbf2f68d4dd9ac41f0c1 273 PANTHER PTHR13773:SF0 1 272 9.8E-52 T 22-04-2016 JE55_RS01170 b14f5ee48bd4bbf2f68d4dd9ac41f0c1 273 PANTHER PTHR13773 1 272 9.8E-52 T 22-04-2016 JE55_RS01170 b14f5ee48bd4bbf2f68d4dd9ac41f0c1 273 Pfam PF01148 Cytidylyltransferase family 3 272 1.8E-56 T 22-04-2016 JE55_RS01170 b14f5ee48bd4bbf2f68d4dd9ac41f0c1 273 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 233 259 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 JE55_RS05630 f02508bd54d642113f7f2da3071d6379 142 PANTHER PTHR11545 1 142 1.3E-72 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JE55_RS05630 f02508bd54d642113f7f2da3071d6379 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.352 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JE55_RS05630 f02508bd54d642113f7f2da3071d6379 142 Pfam PF00572 Ribosomal protein L13 14 138 1.2E-54 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JE55_RS05630 f02508bd54d642113f7f2da3071d6379 142 PIRSF PIRSF002181 1 142 4.1E-47 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 JE55_RS05630 f02508bd54d642113f7f2da3071d6379 142 SUPERFAMILY SSF52161 1 139 1.83E-59 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 JE55_RS05630 f02508bd54d642113f7f2da3071d6379 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 141 4.9E-62 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 JE55_RS05630 f02508bd54d642113f7f2da3071d6379 142 Gene3D G3DSA:3.90.1180.10 3 141 9.1E-64 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 SUPERFAMILY SSF52540 440 743 1.92E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 Gene3D G3DSA:3.40.50.300 174 353 2.9E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 Gene3D G3DSA:1.10.8.60 668 746 1.5E-27 T 22-04-2016 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 61 6.1E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 Gene3D G3DSA:3.40.50.300 445 667 9.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 Gene3D G3DSA:1.10.8.60 354 436 3.2E-30 T 22-04-2016 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 649 2.5E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 SUPERFAMILY SSF52540 172 424 2.96E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 PANTHER PTHR11638 1 766 0.0 T 22-04-2016 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 SMART SM00382 490 639 7.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 SMART SM00382 209 353 7.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 PANTHER PTHR11638:SF111 1 766 0.0 T 22-04-2016 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 2.85E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 2.85E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 2.85E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 2.85E-38 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 SMART SM01086 656 746 2.8E-31 T 22-04-2016 IPR019489 Clp ATPase, C-terminal JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 Gene3D G3DSA:1.10.1780.10 1 143 3.3E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 1.9E-12 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 5.4E-22 T 22-04-2016 IPR019489 Clp ATPase, C-terminal JE55_RS12835 fa8b64e257049dc4171b5bfb4b5f9bd0 766 SUPERFAMILY SSF81923 1 143 8.11E-58 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 PANTHER PTHR11548 1 134 1.6E-78 T 22-04-2016 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 PANTHER PTHR11548 155 323 1.6E-78 T 22-04-2016 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 PRINTS PR00108 Thymidylate synthase family signature 207 233 3.3E-25 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 PRINTS PR00108 Thymidylate synthase family signature 187 202 3.3E-25 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.3E-25 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 PRINTS PR00108 Thymidylate synthase family signature 161 180 3.3E-25 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 PRINTS PR00108 Thymidylate synthase family signature 245 262 3.3E-25 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 Gene3D G3DSA:3.30.572.10 1 323 7.8E-95 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 153 323 1.6E-33 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 Hamap MF_00008 Thymidylate synthase [thyA]. 1 323 36.632 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 Pfam PF00303 Thymidylate synthase 2 323 2.3E-82 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 SUPERFAMILY SSF55831 1 123 4.45E-94 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 JE55_RS03360 7d4f9ae95a00e440663260d40fb49bd5 323 SUPERFAMILY SSF55831 151 323 4.45E-94 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 JE55_RS10130 eeb4c1e4f5e116ff0d271450fe2f89bb 209 SUPERFAMILY SSF53474 11 173 4.41E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS10130 eeb4c1e4f5e116ff0d271450fe2f89bb 209 Gene3D G3DSA:3.40.50.1820 10 177 9.1E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS10130 eeb4c1e4f5e116ff0d271450fe2f89bb 209 Pfam PF06821 Serine hydrolase 14 174 1.3E-49 T 22-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- JE55_RS12650 9005e58cc08f94c3c8cf0925b48ac317 349 Gene3D G3DSA:3.90.78.10 250 349 7.5E-43 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS12650 9005e58cc08f94c3c8cf0925b48ac317 349 Pfam PF01565 FAD binding domain 32 163 3.4E-21 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JE55_RS12650 9005e58cc08f94c3c8cf0925b48ac317 349 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 18 345 4.5E-70 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS12650 9005e58cc08f94c3c8cf0925b48ac317 349 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 226 348 1.8E-34 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS12650 9005e58cc08f94c3c8cf0925b48ac317 349 Gene3D G3DSA:3.30.43.10 16 80 1.1E-19 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 JE55_RS12650 9005e58cc08f94c3c8cf0925b48ac317 349 PANTHER PTHR21071 4 347 1.3E-144 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS12650 9005e58cc08f94c3c8cf0925b48ac317 349 Gene3D G3DSA:3.30.465.10 86 249 2.3E-53 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 JE55_RS12650 9005e58cc08f94c3c8cf0925b48ac317 349 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 349 83.885 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS12650 9005e58cc08f94c3c8cf0925b48ac317 349 SUPERFAMILY SSF56176 16 205 8.18E-44 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS12650 9005e58cc08f94c3c8cf0925b48ac317 349 PANTHER PTHR21071:SF6 4 347 1.3E-144 T 22-04-2016 JE55_RS12650 9005e58cc08f94c3c8cf0925b48ac317 349 SUPERFAMILY SSF56194 223 349 1.15E-47 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS09465 fe01efda7099b542c46caa5b76c9526e 297 SUPERFAMILY SSF51197 51 296 6.96E-56 T 22-04-2016 JE55_RS09465 fe01efda7099b542c46caa5b76c9526e 297 PANTHER PTHR20883 53 281 5.5E-30 T 22-04-2016 JE55_RS09465 fe01efda7099b542c46caa5b76c9526e 297 Gene3D G3DSA:2.60.120.620 44 291 5.7E-57 T 22-04-2016 JE55_RS09465 fe01efda7099b542c46caa5b76c9526e 297 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 58 269 6.1E-33 T 22-04-2016 IPR008775 Phytanoyl-CoA dioxygenase JE55_RS08695 4ad70ad68ccd00a945ef4eb9576a3926 263 Pfam PF01203 Type II secretion system (T2SS), protein N 48 255 5.8E-41 T 22-04-2016 IPR022792 Type II secretion system, protein N JE55_RS02765 1685a738f46097b116feab5e60c2c643 382 Pfam PF13458 Periplasmic binding protein 31 372 3.8E-63 T 22-04-2016 IPR028081 Leucine-binding protein domain JE55_RS02765 1685a738f46097b116feab5e60c2c643 382 PANTHER PTHR30483 9 377 2.6E-83 T 22-04-2016 JE55_RS02765 1685a738f46097b116feab5e60c2c643 382 SUPERFAMILY SSF53822 31 376 1.99E-90 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS02765 1685a738f46097b116feab5e60c2c643 382 PANTHER PTHR30483:SF20 9 377 2.6E-83 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JE55_RS02765 1685a738f46097b116feab5e60c2c643 382 Gene3D G3DSA:3.40.50.2300 31 233 9.9E-58 T 22-04-2016 JE55_RS13780 e6d1ce2c5411ded68ea4299db765f03f 144 PANTHER PTHR33990 1 138 4.6E-42 T 22-04-2016 JE55_RS13780 e6d1ce2c5411ded68ea4299db765f03f 144 SUPERFAMILY SSF54593 1 138 7.2E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS13780 e6d1ce2c5411ded68ea4299db765f03f 144 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 135 5.9E-11 T 22-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase JE55_RS13780 e6d1ce2c5411ded68ea4299db765f03f 144 Gene3D G3DSA:3.10.180.10 7 140 2.8E-44 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS05670 f1b56712d6e050c2b130006d394cadf9 105 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 JE55_RS05670 f1b56712d6e050c2b130006d394cadf9 105 Gene3D G3DSA:2.30.33.40 2 95 2.1E-34 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS05670 f1b56712d6e050c2b130006d394cadf9 105 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 25.503 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS05670 f1b56712d6e050c2b130006d394cadf9 105 PANTHER PTHR10772 1 104 1.9E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS05670 f1b56712d6e050c2b130006d394cadf9 105 PRINTS PR00297 10kDa chaperonin signature 60 72 4.0E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS05670 f1b56712d6e050c2b130006d394cadf9 105 PRINTS PR00297 10kDa chaperonin signature 25 46 4.0E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS05670 f1b56712d6e050c2b130006d394cadf9 105 PRINTS PR00297 10kDa chaperonin signature 81 94 4.0E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS05670 f1b56712d6e050c2b130006d394cadf9 105 PRINTS PR00297 10kDa chaperonin signature 3 18 4.0E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS05670 f1b56712d6e050c2b130006d394cadf9 105 SMART SM00883 2 94 1.4E-52 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS05670 f1b56712d6e050c2b130006d394cadf9 105 SUPERFAMILY SSF50129 1 95 8.95E-32 T 22-04-2016 IPR011032 GroES-like JE55_RS05670 f1b56712d6e050c2b130006d394cadf9 105 Pfam PF00166 Chaperonin 10 Kd subunit 3 93 4.7E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 JE55_RS01005 8124fe0793056ca11822268facf45fdf 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 4.3E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS01005 8124fe0793056ca11822268facf45fdf 231 SUPERFAMILY SSF46785 11 78 2.66E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS01005 8124fe0793056ca11822268facf45fdf 231 PANTHER PTHR11751 14 101 1.1E-21 T 22-04-2016 JE55_RS01005 8124fe0793056ca11822268facf45fdf 231 Pfam PF07729 FCD domain 84 206 9.4E-21 T 22-04-2016 IPR011711 GntR, C-terminal JE55_RS01005 8124fe0793056ca11822268facf45fdf 231 Gene3D G3DSA:1.10.10.10 3 75 7.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS01005 8124fe0793056ca11822268facf45fdf 231 Gene3D G3DSA:1.20.120.530 77 218 6.2E-36 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS01005 8124fe0793056ca11822268facf45fdf 231 SUPERFAMILY SSF48008 80 212 1.1E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS01005 8124fe0793056ca11822268facf45fdf 231 SMART SM00895 84 207 1.1E-18 T 22-04-2016 IPR011711 GntR, C-terminal JE55_RS01005 8124fe0793056ca11822268facf45fdf 231 SMART SM00345 16 74 1.6E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS14420 a904e80766e5b39a5e048b04d098878b 436 PANTHER PTHR11780 20 428 4.5E-208 T 22-04-2016 JE55_RS14420 a904e80766e5b39a5e048b04d098878b 436 SUPERFAMILY SSF142984 246 329 2.09E-25 T 22-04-2016 JE55_RS14420 a904e80766e5b39a5e048b04d098878b 436 SMART SM00928 334 379 3.1E-24 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 JE55_RS14420 a904e80766e5b39a5e048b04d098878b 436 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 53 224 1.5E-45 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain JE55_RS14420 a904e80766e5b39a5e048b04d098878b 436 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 338 419 8.6E-30 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 JE55_RS14420 a904e80766e5b39a5e048b04d098878b 436 SUPERFAMILY SSF140490 331 428 6.28E-37 T 22-04-2016 JE55_RS14420 a904e80766e5b39a5e048b04d098878b 436 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 347 358 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 JE55_RS14420 a904e80766e5b39a5e048b04d098878b 436 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 20 420 1.1E-190 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 JE55_RS14420 a904e80766e5b39a5e048b04d098878b 436 PANTHER PTHR11780:SF10 20 428 4.5E-208 T 22-04-2016 JE55_RS14420 a904e80766e5b39a5e048b04d098878b 436 Pfam PF10531 SLBB domain 248 296 9.6E-12 T 22-04-2016 IPR019554 Soluble ligand binding domain JE55_RS14420 a904e80766e5b39a5e048b04d098878b 436 SUPERFAMILY SSF142019 17 245 2.48E-81 T 22-04-2016 JE55_RS10650 53efdd6098c7899c3fc6c3c694b7ed30 498 Gene3D G3DSA:1.10.3430.10 94 479 1.7E-141 T 22-04-2016 IPR029020 Ammonium/urea transporter JE55_RS10650 53efdd6098c7899c3fc6c3c694b7ed30 498 PANTHER PTHR11730:SF17 71 495 3.4E-189 T 22-04-2016 JE55_RS10650 53efdd6098c7899c3fc6c3c694b7ed30 498 PANTHER PTHR11730 71 495 3.4E-189 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 JE55_RS10650 53efdd6098c7899c3fc6c3c694b7ed30 498 Pfam PF00909 Ammonium Transporter Family 101 496 6.3E-118 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 JE55_RS10650 53efdd6098c7899c3fc6c3c694b7ed30 498 SUPERFAMILY SSF111352 95 479 2.09E-130 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 JE55_RS10650 53efdd6098c7899c3fc6c3c694b7ed30 498 ProSitePatterns PS01219 Ammonium transporters signature. 262 287 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 JE55_RS10650 53efdd6098c7899c3fc6c3c694b7ed30 498 TIGRFAM TIGR00836 amt: ammonium transporter 99 495 2.0E-134 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 JE55_RS15095 3e9a7198cb9df4c00092518f74ce0b9f 315 Pfam PF01039 Carboxyl transferase domain 24 203 1.8E-11 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 JE55_RS15095 3e9a7198cb9df4c00092518f74ce0b9f 315 PANTHER PTHR22855 23 247 5.4E-77 T 22-04-2016 JE55_RS15095 3e9a7198cb9df4c00092518f74ce0b9f 315 PANTHER PTHR22855:SF21 23 247 5.4E-77 T 22-04-2016 JE55_RS15095 3e9a7198cb9df4c00092518f74ce0b9f 315 SUPERFAMILY SSF52096 22 242 4.97E-37 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS15095 3e9a7198cb9df4c00092518f74ce0b9f 315 Gene3D G3DSA:3.90.226.10 19 197 7.6E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS15095 3e9a7198cb9df4c00092518f74ce0b9f 315 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 18 285 4.7E-114 T 22-04-2016 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 SUPERFAMILY SSF52540 29 259 9.49E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 SUPERFAMILY SSF46785 265 339 2.09E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 33 335 1.2E-146 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 Gene3D G3DSA:1.10.10.10 266 336 1.9E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 262 335 2.5E-32 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 264 337 1.0E-36 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 Gene3D G3DSA:1.10.8.60 192 263 7.1E-33 T 22-04-2016 JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 PANTHER PTHR13779 3 350 3.2E-185 T 22-04-2016 JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 Gene3D G3DSA:3.40.50.300 29 185 2.1E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 18 244 2.3E-119 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 SMART SM00382 60 187 4.9E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 PANTHER PTHR13779:SF25 3 350 3.2E-185 T 22-04-2016 JE55_RS05570 2f3ff7e49e9152a59931b95d05026995 356 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 356 182.986 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 JE55_RS16330 bcf7cbc9f85ead37fe064204a8a4837d 519 SUPERFAMILY SSF103473 478 507 5.62E-68 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS16330 bcf7cbc9f85ead37fe064204a8a4837d 519 SUPERFAMILY SSF103473 10 200 5.62E-68 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS16330 bcf7cbc9f85ead37fe064204a8a4837d 519 SUPERFAMILY SSF103473 255 426 5.62E-68 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS16330 bcf7cbc9f85ead37fe064204a8a4837d 519 PANTHER PTHR23501:SF52 10 507 3.2E-226 T 22-04-2016 JE55_RS16330 bcf7cbc9f85ead37fe064204a8a4837d 519 Gene3D G3DSA:1.20.1250.20 20 204 4.2E-31 T 22-04-2016 JE55_RS16330 bcf7cbc9f85ead37fe064204a8a4837d 519 Pfam PF07690 Major Facilitator Superfamily 24 416 2.2E-52 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS16330 bcf7cbc9f85ead37fe064204a8a4837d 519 Gene3D G3DSA:1.20.1250.20 479 505 1.2E-19 T 22-04-2016 JE55_RS16330 bcf7cbc9f85ead37fe064204a8a4837d 519 Gene3D G3DSA:1.20.1250.20 272 427 1.2E-19 T 22-04-2016 JE55_RS16330 bcf7cbc9f85ead37fe064204a8a4837d 519 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 499 2.4E-158 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 JE55_RS16330 bcf7cbc9f85ead37fe064204a8a4837d 519 PANTHER PTHR23501 10 507 3.2E-226 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 5523 5678 5.1E-46 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 3370 3535 5.1E-34 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 2303 2471 1.1E-40 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 4449 4602 1.1E-37 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF52777 5247 5498 1.89E-47 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF52777 3089 3333 1.89E-49 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF52777 1827 2037 2.33E-43 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:2.30.38.10 359 436 4.7E-20 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF13193 AMP-binding enzyme C-terminal domain 1646 1719 4.6E-13 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF13193 AMP-binding enzyme C-terminal domain 2716 2791 3.7E-10 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF13193 AMP-binding enzyme C-terminal domain 3786 3868 7.9E-8 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF13193 AMP-binding enzyme C-terminal domain 4866 4941 6.4E-10 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF52777 2902 3081 1.56E-44 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00550 Phosphopantetheine attachment site 6203 6262 3.4E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00550 Phosphopantetheine attachment site 1745 1808 4.6E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00550 Phosphopantetheine attachment site 604 666 5.2E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00550 Phosphopantetheine attachment site 4971 5034 2.4E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00550 Phosphopantetheine attachment site 2819 2882 1.6E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00550 Phosphopantetheine attachment site 3894 3954 2.6E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF47336 3889 3997 9.42E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.30.300.30 6143 6205 4.3E-29 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.30.300.30 4853 4972 3.6E-38 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.30.300.30 1633 1745 4.2E-33 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.30.300.30 2699 2818 5.3E-34 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.30.300.30 5925 5981 4.3E-29 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.30.300.30 3773 3898 1.2E-28 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF56801 1219 1755 8.11E-137 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2841 2856 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1767 1782 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF56801 2282 2829 3.27E-130 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF47336 1738 1809 2.49E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 1390 1532 3.0E-27 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 2472 2614 1.4E-25 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 3536 3676 2.8E-29 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF56801 6 556 8.63E-105 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF52777 2025 2275 9.12E-42 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF52777 751 916 5.56E-32 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00668 Condensation domain 751 1033 2.3E-49 T 22-04-2016 IPR001242 Condensation domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00668 Condensation domain 2900 3199 3.1E-65 T 22-04-2016 IPR001242 Condensation domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00668 Condensation domain 5056 5358 5.1E-50 T 22-04-2016 IPR001242 Condensation domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00668 Condensation domain 3983 4285 4.4E-72 T 22-04-2016 IPR001242 Condensation domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00668 Condensation domain 1831 2140 2.8E-59 T 22-04-2016 IPR001242 Condensation domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00501 AMP-binding enzyme 3376 3777 1.5E-72 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00501 AMP-binding enzyme 4453 4858 1.1E-80 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00501 AMP-binding enzyme 5530 5929 1.8E-91 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00501 AMP-binding enzyme 1227 1638 1.9E-79 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00501 AMP-binding enzyme 2308 2704 3.1E-78 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF00501 AMP-binding enzyme 13 447 2.0E-82 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 3396 3802 1.1E-106 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 4474 4882 5.5E-111 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 5551 5952 9.5E-114 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1248 1661 6.1E-115 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2330 2728 1.2E-114 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF47336 2812 2882 9.42E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF47336 6195 6266 6.02E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 4603 4751 3.4E-39 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 5679 5840 3.5E-43 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 171 332 4.0E-31 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.30.300.30 438 552 1.8E-10 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 PANTHER PTHR24095:SF137 3957 5986 0.0 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 PANTHER PTHR24095:SF137 1402 1903 0.0 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF52777 4173 4421 3.45E-61 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF52777 5060 5240 1.33E-35 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 PANTHER PTHR24095 3957 5986 0.0 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 PANTHER PTHR24095 1402 1903 0.0 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF52777 3986 4167 9.67E-45 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF56801 4412 4982 4.58E-140 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 1222 1387 1.2E-40 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF47336 4962 5034 1.83E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:3.40.50.980 9 170 1.1E-27 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:2.30.38.10 5841 5918 2.3E-20 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:2.30.38.10 1543 1628 3.1E-22 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:2.30.38.10 4771 4848 1.0E-23 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:2.30.38.10 2615 2694 1.6E-22 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:2.30.38.10 3690 3768 5.9E-20 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2450 2461 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 ProSitePatterns PS00455 Putative AMP-binding domain signature. 5670 5681 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 ProSitePatterns PS00455 Putative AMP-binding domain signature. 4594 4605 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 ProSitePatterns PS00455 Putative AMP-binding domain signature. 3513 3524 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF47336 600 679 2.22E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF52777 923 1185 6.34E-45 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF56801 6138 6214 2.75E-139 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF56801 5522 5978 2.75E-139 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SMART SM00823 Phosphopantetheine attachment site 6201 6270 0.034 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SMART SM00823 Phosphopantetheine attachment site 599 670 7.2E-5 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SMART SM00823 Phosphopantetheine attachment site 4969 5038 0.011 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SMART SM00823 Phosphopantetheine attachment site 1743 1812 4.9E-4 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SMART SM00823 Phosphopantetheine attachment site 2817 2886 0.1 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SMART SM00823 Phosphopantetheine attachment site 3892 3961 9.6E-5 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 SUPERFAMILY SSF56801 3368 3904 9.03E-125 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:1.10.1200.10 1746 1812 1.2E-21 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:1.10.1200.10 604 668 4.6E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:1.10.1200.10 4973 5038 1.2E-24 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:1.10.1200.10 3899 3962 4.2E-21 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:1.10.1200.10 2819 2887 1.1E-18 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Gene3D G3DSA:1.10.1200.10 6206 6269 1.8E-20 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF13745 HxxPF-repeated domain 1056 1168 3.8E-6 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF13745 HxxPF-repeated domain 5381 5477 9.3E-16 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF13745 HxxPF-repeated domain 2164 2246 4.3E-6 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF13745 HxxPF-repeated domain 4308 4399 2.1E-20 T 22-04-2016 JE55_RS17445 51ef5e2b0fe3a33461197dd1aa221d0a 6270 Pfam PF13745 HxxPF-repeated domain 3222 3311 5.1E-10 T 22-04-2016 JE55_RS13135 453dced451d2246af3505568d70fe631 557 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 5 557 43.802 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS13135 453dced451d2246af3505568d70fe631 557 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS13135 453dced451d2246af3505568d70fe631 557 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 556 6.4E-226 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS13135 453dced451d2246af3505568d70fe631 557 SUPERFAMILY SSF52016 380 556 3.45E-57 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel JE55_RS13135 453dced451d2246af3505568d70fe631 557 Pfam PF00920 Dehydratase family 35 554 2.0E-205 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS13135 453dced451d2246af3505568d70fe631 557 SUPERFAMILY SSF143975 3 378 6.41E-133 T 22-04-2016 JE55_RS13135 453dced451d2246af3505568d70fe631 557 PANTHER PTHR21000 4 556 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS13135 453dced451d2246af3505568d70fe631 557 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS13135 453dced451d2246af3505568d70fe631 557 PANTHER PTHR21000:SF5 4 556 0.0 T 22-04-2016 JE55_RS11395 74c5b96ccaec7dbcf8b2e3655d082fc8 216 Gene3D G3DSA:3.40.630.30 1 149 1.3E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS11395 74c5b96ccaec7dbcf8b2e3655d082fc8 216 SUPERFAMILY SSF55729 1 152 7.69E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02430 958c9d9322c171fe25e340b7a13e7f82 460 SUPERFAMILY SSF51338 383 458 2.36E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS02430 958c9d9322c171fe25e340b7a13e7f82 460 PANTHER PTHR11271:SF4 1 460 2.4E-154 T 22-04-2016 IPR010252 Formiminoglutamate deiminase JE55_RS02430 958c9d9322c171fe25e340b7a13e7f82 460 SUPERFAMILY SSF51556 55 380 5.67E-74 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS02430 958c9d9322c171fe25e340b7a13e7f82 460 PANTHER PTHR11271 1 460 2.4E-154 T 22-04-2016 JE55_RS02430 958c9d9322c171fe25e340b7a13e7f82 460 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 7 459 3.2E-183 T 22-04-2016 IPR010252 Formiminoglutamate deiminase JE55_RS02430 958c9d9322c171fe25e340b7a13e7f82 460 Pfam PF01979 Amidohydrolase family 53 435 1.2E-36 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 JE55_RS02430 958c9d9322c171fe25e340b7a13e7f82 460 Gene3D G3DSA:3.20.20.140 59 401 6.2E-79 T 22-04-2016 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 PRINTS PR00992 Alanine racemase signature 61 79 1.5E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 PRINTS PR00992 Alanine racemase signature 27 43 1.5E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 PRINTS PR00992 Alanine racemase signature 265 280 1.5E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 PRINTS PR00992 Alanine racemase signature 248 263 1.5E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 PRINTS PR00992 Alanine racemase signature 286 303 1.5E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 PRINTS PR00992 Alanine racemase signature 190 217 1.5E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 PRINTS PR00992 Alanine racemase signature 155 166 1.5E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 PRINTS PR00992 Alanine racemase signature 338 351 1.5E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 PRINTS PR00992 Alanine racemase signature 121 133 1.5E-70 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 Hamap MF_01201 Alanine racemase. 2 356 33.297 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 TIGRFAM TIGR00492 alr: alanine racemase 5 353 1.4E-114 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 PANTHER PTHR30511 3 351 7.0E-134 T 22-04-2016 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 SMART SM01005 232 356 2.2E-58 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 PANTHER PTHR30511:SF4 3 351 7.0E-134 T 22-04-2016 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 Gene3D G3DSA:2.40.37.10 208 352 2.9E-53 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 1.8E-68 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 Pfam PF00842 Alanine racemase, C-terminal domain 233 353 1.6E-36 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 SUPERFAMILY SSF51419 9 233 7.29E-63 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 SUPERFAMILY SSF50621 227 353 6.98E-44 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 JE55_RS01305 9fec51ea206e71b58f1de8122971c930 356 Gene3D G3DSA:3.20.20.10 12 207 3.1E-66 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 PRINTS PR00094 Adenylate kinase signature 156 171 3.2E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 PRINTS PR00094 Adenylate kinase signature 81 97 3.2E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 PRINTS PR00094 Adenylate kinase signature 4 17 3.2E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 PRINTS PR00094 Adenylate kinase signature 32 46 3.2E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 PRINTS PR00094 Adenylate kinase signature 173 187 3.2E-34 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 Hamap MF_00235 Adenylate kinase [adk]. 1 220 54.731 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 Gene3D G3DSA:3.40.50.300 1 218 3.8E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 TIGRFAM TIGR01351 adk: adenylate kinase 2 184 1.2E-74 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 SUPERFAMILY SSF52540 1 218 7.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 Pfam PF00406 Adenylate kinase 5 184 1.1E-56 T 22-04-2016 JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 PANTHER PTHR23359 1 182 1.4E-109 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 JE55_RS12685 8b6eba29616c5efd0e22198c7fb7cfcf 220 Pfam PF05191 Adenylate kinase, active site lid 123 158 4.6E-18 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 JE55_RS09300 1b3d852be0091c7d242828ef889edf01 170 PANTHER PTHR37484 5 164 5.0E-20 T 22-04-2016 JE55_RS09300 1b3d852be0091c7d242828ef889edf01 170 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 12 155 9.0E-29 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 JE55_RS09300 1b3d852be0091c7d242828ef889edf01 170 Pfam PF04093 rod shape-determining protein MreD 12 154 4.3E-16 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 JE55_RS09300 1b3d852be0091c7d242828ef889edf01 170 PIRSF PIRSF018472 4 163 2.2E-41 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 PANTHER PTHR23083:SF195 63 602 3.1E-40 T 22-04-2016 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 Pfam PF14559 Tetratricopeptide repeat 434 496 1.5E-7 T 22-04-2016 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 Pfam PF14559 Tetratricopeptide repeat 538 599 7.9E-7 T 22-04-2016 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 SMART SM00028 490 524 190.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 SMART SM00028 558 591 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 SMART SM00028 214 247 9.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 SMART SM00028 387 420 140.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 Gene3D G3DSA:1.25.40.10 353 593 5.1E-35 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 SUPERFAMILY SSF48452 429 592 8.76E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 Gene3D G3DSA:1.25.40.10 102 163 4.8E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 Gene3D G3DSA:1.25.40.10 200 348 4.8E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 Pfam PF13432 Tetratricopeptide repeat 261 314 0.015 T 22-04-2016 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 Pfam PF13432 Tetratricopeptide repeat 319 383 1.2E-4 T 22-04-2016 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 SUPERFAMILY SSF48452 310 423 5.22E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 SUPERFAMILY SSF48452 103 344 8.23E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS11130 ae4b8b1fa86d7e6684568b4555f128b7 606 PANTHER PTHR23083 63 602 3.1E-40 T 22-04-2016 JE55_RS13565 68268c128a1941a25dc13e1fbeb370b4 158 Pfam PF08816 Inhibitor of vertebrate lysozyme (Ivy) 41 156 1.4E-42 T 22-04-2016 JE55_RS13565 68268c128a1941a25dc13e1fbeb370b4 158 Gene3D G3DSA:3.40.1420.10 34 158 6.0E-51 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 JE55_RS13565 68268c128a1941a25dc13e1fbeb370b4 158 SUPERFAMILY SSF89872 32 158 1.96E-49 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 JE55_RS13565 68268c128a1941a25dc13e1fbeb370b4 158 PIRSF PIRSF009103 2 158 2.7E-65 T 22-04-2016 IPR014453 Inhibitor of vertebrate lysozyme GO:0042597|GO:0043086 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PANTHER PTHR10724 11 523 4.7E-243 T 22-04-2016 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 12 529 5.3E-206 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SUPERFAMILY SSF50249 351 449 3.13E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PRINTS PR00681 Ribosomal protein S1 signature 339 357 1.2E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PRINTS PR00681 Ribosomal protein S1 signature 164 184 1.2E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PRINTS PR00681 Ribosomal protein S1 signature 299 318 1.2E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PRINTS PR00681 Ribosomal protein S1 signature 135 152 1.2E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PRINTS PR00681 Ribosomal protein S1 signature 117 133 1.2E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PRINTS PR00681 Ribosomal protein S1 signature 221 242 1.2E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PRINTS PR00681 Ribosomal protein S1 signature 93 112 1.2E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PRINTS PR00681 Ribosomal protein S1 signature 48 62 1.2E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PRINTS PR00681 Ribosomal protein S1 signature 30 48 1.2E-80 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SUPERFAMILY SSF50249 264 363 1.5E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Pfam PF00575 S1 RNA binding domain 285 356 1.7E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Pfam PF00575 S1 RNA binding domain 459 529 2.2E-14 T 22-04-2016 IPR003029 S1 domain GO:0003676 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Pfam PF00575 S1 RNA binding domain 28 94 5.7E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Pfam PF00575 S1 RNA binding domain 370 443 2.2E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Pfam PF00575 S1 RNA binding domain 114 180 8.8E-12 T 22-04-2016 IPR003029 S1 domain GO:0003676 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Pfam PF00575 S1 RNA binding domain 198 269 6.7E-23 T 22-04-2016 IPR003029 S1 domain GO:0003676 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SMART SM00316 284 356 7.2E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SMART SM00316 458 529 3.2E-19 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SMART SM00316 112 180 4.4E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SMART SM00316 199 269 1.9E-29 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SMART SM00316 371 443 2.2E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SMART SM00316 28 96 0.11 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SUPERFAMILY SSF50249 113 193 8.92E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Gene3D G3DSA:2.40.50.140 30 110 2.8E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Gene3D G3DSA:2.40.50.140 290 372 2.8E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Gene3D G3DSA:2.40.50.140 373 452 1.8E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PANTHER PTHR10724:SF6 11 523 4.7E-243 T 22-04-2016 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Gene3D G3DSA:2.40.50.140 111 181 2.5E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Gene3D G3DSA:2.40.50.140 193 271 3.6E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 Gene3D G3DSA:2.40.50.140 453 530 6.9E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SUPERFAMILY SSF50249 440 539 3.43E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SUPERFAMILY SSF50249 198 285 1.0E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 PIRSF PIRSF002111 1 546 9.3E-216 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS03595 a1dcb2cb9e167b55428f2f997a9be660 570 SUPERFAMILY SSF50249 13 122 1.64E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS05750 7a03ac6e318b38018b8b4df0428c6de3 332 Gene3D G3DSA:1.10.10.10 2 75 4.7E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05750 7a03ac6e318b38018b8b4df0428c6de3 332 PANTHER PTHR30514:SF1 1 294 5.7E-80 T 22-04-2016 JE55_RS05750 7a03ac6e318b38018b8b4df0428c6de3 332 Pfam PF01380 SIS domain 122 250 1.7E-24 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS05750 7a03ac6e318b38018b8b4df0428c6de3 332 SUPERFAMILY SSF53697 92 265 8.62E-42 T 22-04-2016 JE55_RS05750 7a03ac6e318b38018b8b4df0428c6de3 332 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 73 7.3E-21 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 JE55_RS05750 7a03ac6e318b38018b8b4df0428c6de3 332 PANTHER PTHR30514 1 294 5.7E-80 T 22-04-2016 JE55_RS05750 7a03ac6e318b38018b8b4df0428c6de3 332 Gene3D G3DSA:3.40.50.10490 103 259 4.8E-40 T 22-04-2016 JE55_RS05750 7a03ac6e318b38018b8b4df0428c6de3 332 SUPERFAMILY SSF46689 2 75 1.29E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS15900 9c90b451970d7b8b14497c0c2ac46ab0 267 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 16 262 1.1E-95 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 JE55_RS15900 9c90b451970d7b8b14497c0c2ac46ab0 267 PIRSF PIRSF036628 1 266 5.2E-101 T 22-04-2016 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30|UniPathway: UPA00076 JE55_RS15900 9c90b451970d7b8b14497c0c2ac46ab0 267 SUPERFAMILY SSF51182 16 251 1.08E-63 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS15900 9c90b451970d7b8b14497c0c2ac46ab0 267 Gene3D G3DSA:2.60.120.10 120 264 4.0E-66 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS15900 9c90b451970d7b8b14497c0c2ac46ab0 267 Pfam PF04962 KduI/IolB family 9 262 2.0E-104 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 JE55_RS15900 9c90b451970d7b8b14497c0c2ac46ab0 267 PANTHER PTHR39193 10 264 1.9E-95 T 22-04-2016 JE55_RS15900 9c90b451970d7b8b14497c0c2ac46ab0 267 Gene3D G3DSA:2.60.120.10 14 119 7.9E-39 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS15900 9c90b451970d7b8b14497c0c2ac46ab0 267 PANTHER PTHR39193:SF1 10 264 1.9E-95 T 22-04-2016 JE55_RS11420 4e70239295661c5a407199bee3d0528a 839 SUPERFAMILY SSF49785 31 183 1.63E-22 T 22-04-2016 IPR008979 Galactose-binding domain-like JE55_RS11420 4e70239295661c5a407199bee3d0528a 839 Gene3D G3DSA:3.20.20.80 284 518 9.0E-40 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS11420 4e70239295661c5a407199bee3d0528a 839 Gene3D G3DSA:3.20.20.80 564 630 9.0E-40 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS11420 4e70239295661c5a407199bee3d0528a 839 SUPERFAMILY SSF49303 196 286 9.35E-11 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 JE55_RS11420 4e70239295661c5a407199bee3d0528a 839 SUPERFAMILY SSF51445 283 628 4.08E-75 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS11420 4e70239295661c5a407199bee3d0528a 839 PANTHER PTHR10066 29 131 1.8E-58 T 22-04-2016 JE55_RS11420 4e70239295661c5a407199bee3d0528a 839 PANTHER PTHR10066 157 663 1.8E-58 T 22-04-2016 JE55_RS11420 4e70239295661c5a407199bee3d0528a 839 PANTHER PTHR10066:SF12 29 131 1.8E-58 T 22-04-2016 JE55_RS11420 4e70239295661c5a407199bee3d0528a 839 PANTHER PTHR10066:SF12 157 663 1.8E-58 T 22-04-2016 JE55_RS11420 4e70239295661c5a407199bee3d0528a 839 Gene3D G3DSA:2.60.40.320 196 283 1.1E-8 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 JE55_RS08965 f88bfd18276f017685c62edde072ba42 361 Pfam PF00199 Catalase 65 345 9.0E-27 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 JE55_RS08965 f88bfd18276f017685c62edde072ba42 361 PIRSF PIRSF000296 17 347 4.4E-116 T 22-04-2016 IPR024168 Catalase, SrpA-type, predicted JE55_RS08965 f88bfd18276f017685c62edde072ba42 361 Gene3D G3DSA:2.40.180.10 45 347 5.7E-76 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 JE55_RS08965 f88bfd18276f017685c62edde072ba42 361 PANTHER PTHR11465 1 350 6.2E-97 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 JE55_RS08965 f88bfd18276f017685c62edde072ba42 361 SUPERFAMILY SSF56634 25 343 3.4E-91 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 JE55_RS08965 f88bfd18276f017685c62edde072ba42 361 PRINTS PR00067 Catalase signature 95 113 3.8E-5 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 JE55_RS08965 f88bfd18276f017685c62edde072ba42 361 PRINTS PR00067 Catalase signature 58 80 3.8E-5 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 JE55_RS08965 f88bfd18276f017685c62edde072ba42 361 PRINTS PR00067 Catalase signature 319 345 3.8E-5 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 JE55_RS08965 f88bfd18276f017685c62edde072ba42 361 SMART SM01060 20 361 5.5E-8 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 JE55_RS08965 f88bfd18276f017685c62edde072ba42 361 PANTHER PTHR11465:SF16 1 350 6.2E-97 T 22-04-2016 JE55_RS12160 64033672c3f3d6b9190236f64d2fdfe7 247 PANTHER PTHR26402 1 219 5.7E-80 T 22-04-2016 JE55_RS12160 64033672c3f3d6b9190236f64d2fdfe7 247 Pfam PF00072 Response regulator receiver domain 3 112 2.2E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS12160 64033672c3f3d6b9190236f64d2fdfe7 247 Gene3D G3DSA:1.10.10.10 124 220 1.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12160 64033672c3f3d6b9190236f64d2fdfe7 247 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 218 7.2E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS12160 64033672c3f3d6b9190236f64d2fdfe7 247 Gene3D G3DSA:3.40.50.2300 1 119 4.9E-38 T 22-04-2016 JE55_RS12160 64033672c3f3d6b9190236f64d2fdfe7 247 SMART SM00862 145 218 9.5E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS12160 64033672c3f3d6b9190236f64d2fdfe7 247 SUPERFAMILY SSF52172 1 172 1.02E-37 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS12160 64033672c3f3d6b9190236f64d2fdfe7 247 SMART SM00448 1 112 5.0E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS12160 64033672c3f3d6b9190236f64d2fdfe7 247 PANTHER PTHR26402:SF279 1 219 5.7E-80 T 22-04-2016 JE55_RS15235 ac882b74b99f860dae3f147b72d257af 296 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 28 43 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 JE55_RS15235 ac882b74b99f860dae3f147b72d257af 296 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 28 288 1.2E-92 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 JE55_RS15235 ac882b74b99f860dae3f147b72d257af 296 SUPERFAMILY SSF51717 15 291 1.06E-97 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 JE55_RS15235 ac882b74b99f860dae3f147b72d257af 296 Pfam PF00809 Pterin binding enzyme 29 274 2.6E-80 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 JE55_RS15235 ac882b74b99f860dae3f147b72d257af 296 PANTHER PTHR20941 22 294 2.9E-110 T 22-04-2016 JE55_RS15235 ac882b74b99f860dae3f147b72d257af 296 PANTHER PTHR20941:SF1 22 294 2.9E-110 T 22-04-2016 JE55_RS15235 ac882b74b99f860dae3f147b72d257af 296 Gene3D G3DSA:3.20.20.20 23 291 3.5E-107 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 JE55_RS15235 ac882b74b99f860dae3f147b72d257af 296 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 62 75 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 JE55_RS13295 60e90555ca9802fb9a44f93edbd48359 179 SUPERFAMILY SSF49329 44 177 2.23E-31 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS13295 60e90555ca9802fb9a44f93edbd48359 179 PANTHER PTHR10003 42 177 5.4E-19 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 JE55_RS13295 60e90555ca9802fb9a44f93edbd48359 179 Gene3D G3DSA:2.60.40.200 46 178 8.3E-32 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS13295 60e90555ca9802fb9a44f93edbd48359 179 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 115 124 7.7E-5 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS13295 60e90555ca9802fb9a44f93edbd48359 179 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 134 156 7.7E-5 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS13295 60e90555ca9802fb9a44f93edbd48359 179 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 50 177 2.8E-26 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS10830 f4580ce0e1a38279170015418ba5a411 264 PANTHER PTHR24220 3 250 2.7E-121 T 22-04-2016 JE55_RS10830 f4580ce0e1a38279170015418ba5a411 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS10830 f4580ce0e1a38279170015418ba5a411 264 SUPERFAMILY SSF52540 2 229 1.95E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10830 f4580ce0e1a38279170015418ba5a411 264 SMART SM00382 31 243 1.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS10830 f4580ce0e1a38279170015418ba5a411 264 PANTHER PTHR24220:SF534 3 250 2.7E-121 T 22-04-2016 JE55_RS10830 f4580ce0e1a38279170015418ba5a411 264 Pfam PF00005 ABC transporter 22 177 9.8E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS10830 f4580ce0e1a38279170015418ba5a411 264 Gene3D G3DSA:3.40.50.300 1 230 1.9E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11005 8c2f786dae56409be83d6548df3ee5ee 531 PANTHER PTHR30365:SF0 1 312 5.0E-255 T 22-04-2016 JE55_RS11005 8c2f786dae56409be83d6548df3ee5ee 531 PANTHER PTHR30365:SF0 378 524 5.0E-255 T 22-04-2016 JE55_RS11005 8c2f786dae56409be83d6548df3ee5ee 531 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 505 2.1E-177 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 JE55_RS11005 8c2f786dae56409be83d6548df3ee5ee 531 PANTHER PTHR30365 1 312 5.0E-255 T 22-04-2016 JE55_RS11005 8c2f786dae56409be83d6548df3ee5ee 531 PANTHER PTHR30365 378 524 5.0E-255 T 22-04-2016 JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 4 268 5.3E-115 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 245 4.1E-37 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 PANTHER PTHR11451 2 242 7.5E-86 T 22-04-2016 JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 Gene3D G3DSA:3.40.50.620 4 69 1.0E-38 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 Gene3D G3DSA:3.40.50.620 182 231 1.0E-38 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 Gene3D G3DSA:3.90.800.10 70 179 5.5E-16 T 22-04-2016 JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 PANTHER PTHR11451:SF35 2 242 7.5E-86 T 22-04-2016 JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 295 43.637 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 180 190 1.1E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.1E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.1E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 204 1.1E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS13890 50023f82bad810b9c7a101c6c071b665 297 SUPERFAMILY SSF52374 4 270 7.24E-81 T 22-04-2016 JE55_RS10510 97f281205954880276dc134e7b8cade8 315 PANTHER PTHR11825:SF38 18 310 4.5E-83 T 22-04-2016 JE55_RS10510 97f281205954880276dc134e7b8cade8 315 SUPERFAMILY SSF56752 18 295 5.1E-74 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 JE55_RS10510 97f281205954880276dc134e7b8cade8 315 Gene3D G3DSA:3.20.10.10 140 295 3.6E-43 T 22-04-2016 JE55_RS10510 97f281205954880276dc134e7b8cade8 315 Gene3D G3DSA:3.30.470.10 18 137 9.5E-33 T 22-04-2016 JE55_RS10510 97f281205954880276dc134e7b8cade8 315 PANTHER PTHR11825 18 310 4.5E-83 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 JE55_RS10510 97f281205954880276dc134e7b8cade8 315 Pfam PF01063 Amino-transferase class IV 40 270 9.1E-47 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 JE55_RS14665 e8c65cc8790d501f1e0945d43a2fc6ea 541 Gene3D G3DSA:1.20.210.10 4 495 8.4E-74 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS14665 e8c65cc8790d501f1e0945d43a2fc6ea 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 409 430 1.7E-14 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS14665 e8c65cc8790d501f1e0945d43a2fc6ea 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 111 123 1.7E-14 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS14665 e8c65cc8790d501f1e0945d43a2fc6ea 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 44 67 1.7E-14 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS14665 e8c65cc8790d501f1e0945d43a2fc6ea 541 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 377 1.7E-14 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS14665 e8c65cc8790d501f1e0945d43a2fc6ea 541 SUPERFAMILY SSF81442 4 529 8.76E-111 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS14665 e8c65cc8790d501f1e0945d43a2fc6ea 541 PANTHER PTHR10422:SF17 1 472 2.6E-159 T 22-04-2016 JE55_RS14665 e8c65cc8790d501f1e0945d43a2fc6ea 541 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 7 456 3.4E-82 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS14665 e8c65cc8790d501f1e0945d43a2fc6ea 541 PANTHER PTHR10422 1 472 2.6E-159 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS14805 aac0ba88c4a78e6358b36f87e4e1ae2d 427 SUPERFAMILY SSF141868 33 260 9.15E-52 T 22-04-2016 IPR001633 EAL domain JE55_RS14805 aac0ba88c4a78e6358b36f87e4e1ae2d 427 Gene3D G3DSA:3.20.20.450 32 258 6.8E-47 T 22-04-2016 IPR001633 EAL domain JE55_RS14805 aac0ba88c4a78e6358b36f87e4e1ae2d 427 Pfam PF00563 EAL domain 31 253 5.0E-45 T 22-04-2016 IPR001633 EAL domain JE55_RS14805 aac0ba88c4a78e6358b36f87e4e1ae2d 427 SMART SM00052 20 258 6.3E-27 T 22-04-2016 IPR001633 EAL domain JE55_RS14805 aac0ba88c4a78e6358b36f87e4e1ae2d 427 PANTHER PTHR33121 36 300 2.0E-38 T 22-04-2016 JE55_RS14805 aac0ba88c4a78e6358b36f87e4e1ae2d 427 PANTHER PTHR33121:SF10 36 300 2.0E-38 T 22-04-2016 JE55_RS14805 aac0ba88c4a78e6358b36f87e4e1ae2d 427 SUPERFAMILY SSF103190 319 422 1.26E-9 T 22-04-2016 IPR029151 Periplasmic sensor domain-like JE55_RS14805 aac0ba88c4a78e6358b36f87e4e1ae2d 427 Gene3D G3DSA:3.30.450.20 320 421 1.7E-5 T 22-04-2016 JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 Gene3D G3DSA:3.30.70.920 59 158 1.9E-37 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 Gene3D G3DSA:1.10.10.10 2 57 1.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 PANTHER PTHR30154 1 81 1.8E-59 T 22-04-2016 JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 PANTHER PTHR30154 97 171 1.8E-59 T 22-04-2016 JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 SUPERFAMILY SSF54909 98 170 6.03E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 5.8E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 5.8E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 5.8E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 SMART SM00344 6 130 2.1E-42 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 3.2E-23 T 22-04-2016 JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 PANTHER PTHR30154:SF0 1 81 1.8E-59 T 22-04-2016 JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 PANTHER PTHR30154:SF0 97 171 1.8E-59 T 22-04-2016 JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 SUPERFAMILY SSF46785 5 65 3.11E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07560 e4f49a9fbc90e66ad4e0311a957777c8 171 Pfam PF01037 Lrp/AsnC ligand binding domain 98 161 3.2E-23 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 Gene3D G3DSA:3.40.50.720 28 124 1.9E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 PANTHER PTHR23135 29 491 4.9E-244 T 22-04-2016 JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 Pfam PF02875 Mur ligase family, glutamate ligase domain 348 423 5.4E-10 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 SUPERFAMILY SSF53623 132 345 5.63E-54 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 PANTHER PTHR23135:SF17 29 491 4.9E-244 T 22-04-2016 JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 Pfam PF01225 Mur ligase family, catalytic domain 36 133 2.2E-18 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 35 492 59.718 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 Gene3D G3DSA:3.40.1190.10 126 349 1.4E-91 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 36 491 8.6E-217 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 Pfam PF08245 Mur ligase middle domain 142 328 5.1E-22 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 SUPERFAMILY SSF53244 348 491 7.72E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 Gene3D G3DSA:3.90.190.20 350 492 1.8E-33 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS05985 e03b31c233a35d8d9b0859c2c5c0d71a 504 SUPERFAMILY SSF51984 35 124 2.35E-21 T 22-04-2016 JE55_RS02110 793b1412774e76c4b3f8a5edec308eaa 417 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 417 1.7E-145 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 JE55_RS02110 793b1412774e76c4b3f8a5edec308eaa 417 PANTHER PTHR30489:SF8 9 417 1.9E-100 T 22-04-2016 JE55_RS02110 793b1412774e76c4b3f8a5edec308eaa 417 Pfam PF12704 MacB-like periplasmic core domain 31 245 2.2E-22 T 22-04-2016 IPR025857 MacB-like periplasmic core domain JE55_RS02110 793b1412774e76c4b3f8a5edec308eaa 417 PANTHER PTHR30489 9 417 1.9E-100 T 22-04-2016 JE55_RS02110 793b1412774e76c4b3f8a5edec308eaa 417 Pfam PF02687 FtsX-like permease family 277 410 1.3E-15 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 JE55_RS07535 039e131ee965e83b8b49ce03f1f28827 206 SUPERFAMILY SSF117916 36 131 1.41E-22 T 22-04-2016 JE55_RS07535 039e131ee965e83b8b49ce03f1f28827 206 Pfam PF01883 Domain of unknown function DUF59 40 101 1.8E-10 T 22-04-2016 IPR002744 Domain of unknown function DUF59 JE55_RS07535 039e131ee965e83b8b49ce03f1f28827 206 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 47 205 2.9E-56 T 22-04-2016 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit UniPathway: UPA00930 JE55_RS00870 649f24fad03487d2cc7d4c1b1d68fcbf 175 SUPERFAMILY SSF69118 3 172 2.76E-38 T 22-04-2016 IPR029032 AhpD-like JE55_RS00870 649f24fad03487d2cc7d4c1b1d68fcbf 175 Hamap MF_01676 Alkyl hydroperoxide reductase AhpD [ahpD]. 1 175 75.364 T 22-04-2016 IPR004674 Alkylhydroperoxidase AhpD GO:0006979|GO:0032843|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS00870 649f24fad03487d2cc7d4c1b1d68fcbf 175 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 111 159 1.5E-7 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS00870 649f24fad03487d2cc7d4c1b1d68fcbf 175 Pfam PF02627 Carboxymuconolactone decarboxylase family 94 169 5.7E-13 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS00870 649f24fad03487d2cc7d4c1b1d68fcbf 175 Gene3D G3DSA:1.20.1290.10 3 172 9.9E-43 T 22-04-2016 IPR029032 AhpD-like JE55_RS26405 35f601ff55897a080ef331aef87e182d 253 PANTHER PTHR30529:SF1 85 253 2.5E-50 T 22-04-2016 JE55_RS26405 35f601ff55897a080ef331aef87e182d 253 PANTHER PTHR30529 85 253 2.5E-50 T 22-04-2016 JE55_RS26405 35f601ff55897a080ef331aef87e182d 253 SUPERFAMILY SSF81342 90 247 3.27E-29 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 JE55_RS26405 35f601ff55897a080ef331aef87e182d 253 Pfam PF01292 Prokaryotic cytochrome b561 92 252 4.4E-22 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JE55_RS14470 611c9d44e6f8774a79a5d0fe7db0d39a 196 ProSitePatterns PS00893 Nudix box signature. 84 105 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JE55_RS14470 611c9d44e6f8774a79a5d0fe7db0d39a 196 PANTHER PTHR11839 16 180 9.1E-50 T 22-04-2016 JE55_RS14470 611c9d44e6f8774a79a5d0fe7db0d39a 196 SUPERFAMILY SSF55811 16 181 4.87E-49 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS14470 611c9d44e6f8774a79a5d0fe7db0d39a 196 Pfam PF00293 NUDIX domain 50 159 3.9E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 JE55_RS14470 611c9d44e6f8774a79a5d0fe7db0d39a 196 PANTHER PTHR11839:SF9 16 180 9.1E-50 T 22-04-2016 JE55_RS14470 611c9d44e6f8774a79a5d0fe7db0d39a 196 Gene3D G3DSA:3.90.79.10 14 182 9.0E-56 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS03205 84e6834392eb77843765f18bab18f446 215 PANTHER PTHR11746:SF102 134 198 1.3E-20 T 22-04-2016 JE55_RS03205 84e6834392eb77843765f18bab18f446 215 PANTHER PTHR11746 134 198 1.3E-20 T 22-04-2016 JE55_RS03205 84e6834392eb77843765f18bab18f446 215 Hamap MF_00528 Septum formation protein Maf [maf]. 10 201 28.973 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 JE55_RS03205 84e6834392eb77843765f18bab18f446 215 SUPERFAMILY SSF52972 8 195 6.08E-53 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like JE55_RS03205 84e6834392eb77843765f18bab18f446 215 TIGRFAM TIGR00172 maf: septum formation protein Maf 8 195 1.4E-41 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 JE55_RS03205 84e6834392eb77843765f18bab18f446 215 Pfam PF02545 Maf-like protein 10 196 1.4E-41 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 JE55_RS03205 84e6834392eb77843765f18bab18f446 215 Gene3D G3DSA:3.90.950.10 9 199 4.6E-52 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like JE55_RS03205 84e6834392eb77843765f18bab18f446 215 PIRSF PIRSF006305 2 201 4.1E-42 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 Pfam PF04408 Helicase associated domain (HA2) 497 568 1.4E-18 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 Gene3D G3DSA:3.40.50.300 79 240 4.1E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 Pfam PF11898 Domain of unknown function (DUF3418) 739 1371 1.7E-216 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 SUPERFAMILY SSF52540 82 274 3.6E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 SUPERFAMILY SSF52540 676 710 3.6E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 SUPERFAMILY SSF52540 301 592 3.6E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 69 1045 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 637 724 1.0E-13 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 PANTHER PTHR18934 765 899 0.0 T 22-04-2016 JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 PANTHER PTHR18934 77 728 0.0 T 22-04-2016 JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 SMART SM00487 77 269 1.4E-23 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 Gene3D G3DSA:3.40.50.300 308 446 8.2E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 PANTHER PTHR18934:SF109 765 899 0.0 T 22-04-2016 JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 PANTHER PTHR18934:SF109 77 728 0.0 T 22-04-2016 JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 Pfam PF00271 Helicase conserved C-terminal domain 316 433 1.6E-10 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 SMART SM00490 334 434 1.6E-15 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 SMART SM00847 494 584 6.0E-36 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 JE55_RS02345 e3f714d8cd178702f168e88fb91d2ac0 1375 SMART SM00382 94 400 3.6E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS00265 39727fc3f8f7cdcc01d69a4c7b8d6521 281 PANTHER PTHR30164 8 270 1.3E-80 T 22-04-2016 JE55_RS00265 39727fc3f8f7cdcc01d69a4c7b8d6521 281 Pfam PF06167 Glucose-regulated metallo-peptidase M90 11 265 1.9E-95 T 22-04-2016 IPR010384 MtfA family JE55_RS00265 39727fc3f8f7cdcc01d69a4c7b8d6521 281 SUPERFAMILY SSF55486 43 267 1.61E-41 T 22-04-2016 JE55_RS00265 39727fc3f8f7cdcc01d69a4c7b8d6521 281 Gene3D G3DSA:3.40.390.10 35 266 1.1E-37 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 Gene3D G3DSA:2.40.50.100 1163 1215 5.2E-6 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1373 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 SMART SM00663 235 514 8.1E-176 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 PANTHER PTHR19376 1309 1410 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 PANTHER PTHR19376 1183 1268 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 PANTHER PTHR19376 575 948 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 PANTHER PTHR19376 975 1164 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 SUPERFAMILY SSF64484 17 949 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 SUPERFAMILY SSF64484 1140 1369 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 PANTHER PTHR19376:SF32 1309 1410 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 PANTHER PTHR19376:SF32 1183 1268 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 PANTHER PTHR19376:SF32 575 948 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 PANTHER PTHR19376:SF32 975 1164 0.0 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 593 32.344 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 649 7.3E-20 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1382 10.43 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 Pfam PF04997 RNA polymerase Rpb1, domain 1 16 342 6.2E-88 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 392 5.1E-8 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 Pfam PF00623 RNA polymerase Rpb1, domain 2 391 485 1.3E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 Pfam PF05000 RNA polymerase Rpb1, domain 4 679 768 8.3E-19 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 Pfam PF04998 RNA polymerase Rpb1, domain 5 771 1322 4.8E-78 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 Gene3D G3DSA:2.40.40.20 349 376 1.6E-36 T 22-04-2016 JE55_RS07425 757f9b4195e979ba147723f67530033a 1412 Gene3D G3DSA:2.40.40.20 417 489 1.6E-36 T 22-04-2016 JE55_RS03585 9fbbd5bd03ff2031d77f039b2df59ba2 97 Pfam PF06305 Protein of unknown function (DUF1049) 23 82 2.3E-15 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 JE55_RS00980 42cff2974278c73bfbab0d697e0d8bd0 337 SUPERFAMILY SSF49785 14 172 4.04E-61 T 22-04-2016 IPR008979 Galactose-binding domain-like JE55_RS00980 42cff2974278c73bfbab0d697e0d8bd0 337 TIGRFAM TIGR02961 allantoicase: allantoicase 17 333 1.1E-145 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS00980 42cff2974278c73bfbab0d697e0d8bd0 337 Gene3D G3DSA:2.60.120.260 177 335 6.4E-58 T 22-04-2016 IPR008979 Galactose-binding domain-like JE55_RS00980 42cff2974278c73bfbab0d697e0d8bd0 337 Gene3D G3DSA:2.60.120.260 11 172 2.4E-63 T 22-04-2016 IPR008979 Galactose-binding domain-like JE55_RS00980 42cff2974278c73bfbab0d697e0d8bd0 337 SUPERFAMILY SSF49785 182 335 8.08E-56 T 22-04-2016 IPR008979 Galactose-binding domain-like JE55_RS00980 42cff2974278c73bfbab0d697e0d8bd0 337 Hamap MF_00813 Probable allantoicase [alc]. 6 336 61.092 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS00980 42cff2974278c73bfbab0d697e0d8bd0 337 PIRSF PIRSF016516 2 337 1.3E-157 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS00980 42cff2974278c73bfbab0d697e0d8bd0 337 Pfam PF03561 Allantoicase repeat 193 333 7.4E-47 T 22-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS00980 42cff2974278c73bfbab0d697e0d8bd0 337 Pfam PF03561 Allantoicase repeat 26 170 2.2E-48 T 22-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS00980 42cff2974278c73bfbab0d697e0d8bd0 337 PANTHER PTHR12045 3 333 2.6E-150 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS08540 c2e172a4cb7906942fd451ea77bf1933 508 SUPERFAMILY SSF53720 12 493 1.02E-153 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS08540 c2e172a4cb7906942fd451ea77bf1933 508 PANTHER PTHR11699 1 496 9.6E-281 T 22-04-2016 JE55_RS08540 c2e172a4cb7906942fd451ea77bf1933 508 Pfam PF00171 Aldehyde dehydrogenase family 30 488 4.5E-145 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS08540 c2e172a4cb7906942fd451ea77bf1933 508 Gene3D G3DSA:3.40.605.10 16 271 1.8E-92 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS08540 c2e172a4cb7906942fd451ea77bf1933 508 PANTHER PTHR11699:SF188 1 496 9.6E-281 T 22-04-2016 JE55_RS08540 c2e172a4cb7906942fd451ea77bf1933 508 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 16 492 3.0E-214 T 22-04-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373 JE55_RS08540 c2e172a4cb7906942fd451ea77bf1933 508 Gene3D G3DSA:3.40.309.10 272 453 5.9E-66 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS08540 c2e172a4cb7906942fd451ea77bf1933 508 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 285 296 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 JE55_RS18810 97f927e5714e72be52f008d2fd654e6f 291 SUPERFAMILY SSF109736 103 169 3.53E-23 T 22-04-2016 JE55_RS18810 97f927e5714e72be52f008d2fd654e6f 291 SUPERFAMILY SSF82697 6 100 9.42E-27 T 22-04-2016 JE55_RS18810 97f927e5714e72be52f008d2fd654e6f 291 Gene3D G3DSA:3.30.1330.10 160 289 4.1E-24 T 22-04-2016 IPR016188 PurM-like, N-terminal domain JE55_RS18810 97f927e5714e72be52f008d2fd654e6f 291 PANTHER PTHR10099:SF5 10 291 1.8E-145 T 22-04-2016 JE55_RS18810 97f927e5714e72be52f008d2fd654e6f 291 SUPERFAMILY SSF55326 170 290 4.88E-34 T 22-04-2016 JE55_RS18810 97f927e5714e72be52f008d2fd654e6f 291 PANTHER PTHR10099 10 291 1.8E-145 T 22-04-2016 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 SUPERFAMILY SSF81296 788 827 6.86E-9 T 22-04-2016 IPR014756 Immunoglobulin E-set JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 ProSitePatterns PS00018 EF-hand calcium-binding domain. 423 435 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 Gene3D G3DSA:3.20.20.80 340 829 7.1E-136 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 Gene3D G3DSA:2.60.40.290 55 193 6.6E-49 T 22-04-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 Gene3D G3DSA:3.30.379.10 232 339 1.5E-18 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 342 771 1.8E-100 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 SUPERFAMILY SSF49384 54 217 6.91E-47 T 22-04-2016 IPR008965 Carbohydrate-binding domain GO:0030246 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PRINTS PR00738 Glycosyl hydrolase family 20 signature 508 526 1.7E-42 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PRINTS PR00738 Glycosyl hydrolase family 20 signature 303 323 1.7E-42 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PRINTS PR00738 Glycosyl hydrolase family 20 signature 365 386 1.7E-42 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PRINTS PR00738 Glycosyl hydrolase family 20 signature 336 353 1.7E-42 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PRINTS PR00738 Glycosyl hydrolase family 20 signature 535 548 1.7E-42 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PRINTS PR00738 Glycosyl hydrolase family 20 signature 735 751 1.7E-42 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PRINTS PR00738 Glycosyl hydrolase family 20 signature 441 458 1.7E-42 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PRINTS PR00738 Glycosyl hydrolase family 20 signature 753 770 1.7E-42 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PANTHER PTHR22600:SF12 424 465 3.8E-156 T 22-04-2016 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PANTHER PTHR22600:SF12 483 547 3.8E-156 T 22-04-2016 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PANTHER PTHR22600:SF12 800 826 3.8E-156 T 22-04-2016 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PANTHER PTHR22600:SF12 294 402 3.8E-156 T 22-04-2016 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PANTHER PTHR22600:SF12 574 781 3.8E-156 T 22-04-2016 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 SUPERFAMILY SSF51445 342 783 3.5E-132 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 SUPERFAMILY SSF55545 221 341 3.4E-20 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PANTHER PTHR22600 424 465 3.8E-156 T 22-04-2016 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PANTHER PTHR22600 483 547 3.8E-156 T 22-04-2016 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PANTHER PTHR22600 800 826 3.8E-156 T 22-04-2016 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PANTHER PTHR22600 294 402 3.8E-156 T 22-04-2016 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 PANTHER PTHR22600 574 781 3.8E-156 T 22-04-2016 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 Pfam PF03173 Putative carbohydrate binding domain 61 205 1.2E-33 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 226 339 2.5E-13 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 JE55_RS10985 b5bc2ddf92bfee816d1d132b740ce321 833 SMART SM01081 59 222 3.8E-62 T 22-04-2016 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00349 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 20 756 1.5E-234 T 22-04-2016 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 13 768 33.259 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 41 498 1.7E-131 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 SUPERFAMILY SSF101904 529 758 2.88E-46 T 22-04-2016 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 PANTHER PTHR10169:SF30 300 550 9.7E-202 T 22-04-2016 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 PANTHER PTHR10169:SF30 20 276 9.7E-202 T 22-04-2016 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 Gene3D G3DSA:2.120.10.90 524 731 1.2E-26 T 22-04-2016 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 PANTHER PTHR10169 300 550 9.7E-202 T 22-04-2016 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 PANTHER PTHR10169 20 276 9.7E-202 T 22-04-2016 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 Gene3D G3DSA:3.90.199.10 40 245 7.4E-109 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 Gene3D G3DSA:3.90.199.10 364 429 7.4E-109 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 SUPERFAMILY SSF56719 40 514 3.53E-150 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 SMART SM00434 20 492 4.6E-221 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13660 adc0c8950b84b7e7807485e5e8b79342 772 Gene3D G3DSA:3.30.1360.40 246 362 6.4E-21 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 454 1.2E-190 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 SUPERFAMILY SSF54631 93 201 3.78E-28 T 22-04-2016 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 SMART SM01240 6 472 0.0 T 22-04-2016 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 Pfam PF00571 CBS domain 147 200 1.1E-6 T 22-04-2016 IPR000644 CBS domain JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 Pfam PF00571 CBS domain 94 138 1.2E-9 T 22-04-2016 IPR000644 CBS domain JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 PIRSF PIRSF000130 1 486 3.5E-205 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 472 9.3E-165 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 SUPERFAMILY SSF51412 215 476 4.58E-126 T 22-04-2016 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 SUPERFAMILY SSF51412 2 89 4.58E-126 T 22-04-2016 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 Gene3D G3DSA:3.20.20.70 4 484 1.6E-203 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 SMART SM00116 95 142 2.2E-11 T 22-04-2016 IPR000644 CBS domain JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 SMART SM00116 156 204 7.5E-8 T 22-04-2016 IPR000644 CBS domain JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 485 85.218 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 PANTHER PTHR11911 1 279 1.1E-247 T 22-04-2016 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 PANTHER PTHR11911 297 483 1.1E-247 T 22-04-2016 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 PANTHER PTHR11911:SF6 1 279 1.1E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 JE55_RS01045 dc15ab7f5cd5d168912ab690a5abf8d8 486 PANTHER PTHR11911:SF6 297 483 1.1E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 JE55_RS04445 366486941cb6c30211988d018e88e8d8 425 PANTHER PTHR11647:SF70 1 424 1.9E-127 T 22-04-2016 JE55_RS04445 366486941cb6c30211988d018e88e8d8 425 SUPERFAMILY SSF51556 56 367 5.45E-86 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS04445 366486941cb6c30211988d018e88e8d8 425 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 18 423 4.0E-96 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS04445 366486941cb6c30211988d018e88e8d8 425 Gene3D G3DSA:3.20.20.140 70 388 3.1E-85 T 22-04-2016 JE55_RS04445 366486941cb6c30211988d018e88e8d8 425 Hamap MF_00220_B Dihydroorotase [pyrC]. 2 425 32.025 T 22-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS04445 366486941cb6c30211988d018e88e8d8 425 Pfam PF01979 Amidohydrolase family 281 420 2.1E-12 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 JE55_RS04445 366486941cb6c30211988d018e88e8d8 425 Gene3D G3DSA:2.30.40.10 2 69 1.1E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS04445 366486941cb6c30211988d018e88e8d8 425 PANTHER PTHR11647 1 424 1.9E-127 T 22-04-2016 JE55_RS04445 366486941cb6c30211988d018e88e8d8 425 SUPERFAMILY SSF51338 1 55 7.43E-29 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS04445 366486941cb6c30211988d018e88e8d8 425 SUPERFAMILY SSF51338 367 423 7.43E-29 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 PANTHER PTHR32234 38 151 7.8E-134 T 22-04-2016 JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 PANTHER PTHR32234 170 623 7.8E-134 T 22-04-2016 JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 PANTHER PTHR32234:SF0 38 151 7.8E-134 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 PANTHER PTHR32234:SF0 170 623 7.8E-134 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 SUPERFAMILY SSF52833 510 616 5.05E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 Pfam PF13899 Thioredoxin-like 519 594 1.6E-9 T 22-04-2016 JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 206 408 1.3E-15 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 Pfam PF11412 Disulphide bond corrector protein DsbC 37 149 2.1E-33 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 SUPERFAMILY SSF74863 35 151 1.2E-34 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 Gene3D G3DSA:2.60.40.1250 32 153 6.9E-40 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 ProSitePatterns PS00194 Thioredoxin family active site. 529 547 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 JE55_RS07240 7678e1c7a3870d4ea1f6ce822887d608 627 Gene3D G3DSA:3.40.30.10 514 618 1.0E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS16395 a34d327559d6022e20ec71e6959b4716 559 Gene3D G3DSA:3.10.20.310 69 140 3.5E-8 T 22-04-2016 JE55_RS16395 a34d327559d6022e20ec71e6959b4716 559 PANTHER PTHR34597 82 558 2.3E-37 T 22-04-2016 JE55_RS16395 a34d327559d6022e20ec71e6959b4716 559 Gene3D G3DSA:2.40.160.50 176 557 1.7E-60 T 22-04-2016 JE55_RS16395 a34d327559d6022e20ec71e6959b4716 559 Pfam PF08479 POTRA domain, ShlB-type 66 140 1.0E-18 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type JE55_RS11095 8b7a0c48c35db3882289dd8089b77bc2 356 Pfam PF00155 Aminotransferase class I and II 27 350 2.5E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS11095 8b7a0c48c35db3882289dd8089b77bc2 356 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 210 219 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 JE55_RS11095 8b7a0c48c35db3882289dd8089b77bc2 356 SUPERFAMILY SSF53383 4 354 2.99E-78 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS11095 8b7a0c48c35db3882289dd8089b77bc2 356 Gene3D G3DSA:3.40.640.10 38 255 1.5E-63 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS11095 8b7a0c48c35db3882289dd8089b77bc2 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 354 55.515 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 JE55_RS11095 8b7a0c48c35db3882289dd8089b77bc2 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 352 3.9E-89 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 JE55_RS11095 8b7a0c48c35db3882289dd8089b77bc2 356 Gene3D G3DSA:3.90.1150.10 256 354 4.7E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS11095 8b7a0c48c35db3882289dd8089b77bc2 356 PANTHER PTHR11751 3 353 7.8E-112 T 22-04-2016 JE55_RS11095 8b7a0c48c35db3882289dd8089b77bc2 356 PANTHER PTHR11751:SF398 3 353 7.8E-112 T 22-04-2016 JE55_RS16820 366657dc6e1ac0321ba1f150c30543e8 560 PANTHER PTHR30029 56 560 3.0E-211 T 22-04-2016 JE55_RS16820 366657dc6e1ac0321ba1f150c30543e8 560 PANTHER PTHR30029:SF2 56 560 3.0E-211 T 22-04-2016 JE55_RS16820 366657dc6e1ac0321ba1f150c30543e8 560 Pfam PF04293 SpoVR like protein 66 498 7.3E-173 T 22-04-2016 IPR007390 Sporulation stage V, protein R JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 Gene3D G3DSA:3.40.190.10 97 181 1.3E-15 T 22-04-2016 JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 Gene3D G3DSA:1.10.10.10 9 91 8.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 Gene3D G3DSA:3.40.190.10 182 267 7.0E-19 T 22-04-2016 JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 PANTHER PTHR30537 1 306 3.5E-97 T 22-04-2016 JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 PANTHER PTHR30537:SF5 1 306 3.5E-97 T 22-04-2016 JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 SUPERFAMILY SSF46785 8 92 2.36E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 2.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 SUPERFAMILY SSF53850 92 302 6.21E-37 T 22-04-2016 JE55_RS17255 aabfb6b7fd7c0197e6136c36ce8134ea 306 Pfam PF03466 LysR substrate binding domain 92 300 1.8E-34 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS12665 9430d28125aa8929cd65bd1ec2598e12 92 PANTHER PTHR33398 1 90 1.1E-29 T 22-04-2016 JE55_RS12665 9430d28125aa8929cd65bd1ec2598e12 92 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 9.4E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS12665 9430d28125aa8929cd65bd1ec2598e12 92 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 91 1.0E-32 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS12665 9430d28125aa8929cd65bd1ec2598e12 92 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.417 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS12665 9430d28125aa8929cd65bd1ec2598e12 92 Gene3D G3DSA:1.20.58.110 1 87 1.0E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS12665 9430d28125aa8929cd65bd1ec2598e12 92 SUPERFAMILY SSF46992 3 86 7.85E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS12665 9430d28125aa8929cd65bd1ec2598e12 92 Pfam PF01649 Ribosomal protein S20 2 84 7.3E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS05635 00154e6e531cd2bc6de702f12af50231 140 Pfam PF02566 OsmC-like protein 35 131 8.1E-16 T 22-04-2016 IPR003718 OsmC/Ohr family JE55_RS05635 00154e6e531cd2bc6de702f12af50231 140 Gene3D G3DSA:3.30.300.20 41 138 4.2E-42 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta JE55_RS05635 00154e6e531cd2bc6de702f12af50231 140 PANTHER PTHR34352 1 140 3.1E-39 T 22-04-2016 JE55_RS05635 00154e6e531cd2bc6de702f12af50231 140 Gene3D G3DSA:2.20.25.10 1 35 1.6E-15 T 22-04-2016 JE55_RS05635 00154e6e531cd2bc6de702f12af50231 140 SUPERFAMILY SSF82784 1 138 7.72E-38 T 22-04-2016 IPR003718 OsmC/Ohr family JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 PANTHER PTHR24220 5 343 4.2E-160 T 22-04-2016 JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 Gene3D G3DSA:2.40.50.140 286 344 2.0E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 Gene3D G3DSA:3.40.50.300 5 236 1.2E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 SMART SM00382 28 211 3.5E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 Pfam PF08402 TOBE domain 281 353 1.6E-8 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 Gene3D G3DSA:2.40.50.100 347 360 9.0E-20 T 22-04-2016 JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 Gene3D G3DSA:2.40.50.100 239 285 9.0E-20 T 22-04-2016 JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 SUPERFAMILY SSF52540 5 242 3.78E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 PANTHER PTHR24220:SF572 5 343 4.2E-160 T 22-04-2016 JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 Pfam PF00005 ABC transporter 19 161 8.9E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS12460 aeaf7906d6600200723bc949a0d9ec0a 370 SUPERFAMILY SSF50331 236 360 1.87E-27 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 Gene3D G3DSA:3.90.226.10 10 288 1.0E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 SUPERFAMILY SSF48179 610 701 5.36E-21 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 SUPERFAMILY SSF48179 484 627 2.3E-27 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 614 699 3.8E-5 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 485 578 1.3E-21 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 SUPERFAMILY SSF51735 301 481 3.65E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 SUPERFAMILY SSF52096 9 293 8.67E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 Gene3D G3DSA:1.10.1040.10 487 578 5.7E-18 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 Gene3D G3DSA:1.10.1040.10 619 701 6.6E-13 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 Gene3D G3DSA:3.40.50.720 299 486 1.5E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 201 2.3E-35 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 PANTHER PTHR23309:SF9 10 703 4.3E-280 T 22-04-2016 JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 PANTHER PTHR23309 10 703 4.3E-280 T 22-04-2016 JE55_RS10565 c950fe171068e46bfb09acea97f4edf1 708 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 305 480 7.3E-57 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS10490 8e211512393de8cf17b4c644c4615fef 397 Pfam PF04892 VanZ like family 23 132 1.6E-8 T 22-04-2016 IPR006976 VanZ-like JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 Hamap MF_00163 Peptide deformylase [def]. 2 163 30.452 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 161 4.5E-59 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 PANTHER PTHR10458:SF10 1 165 9.7E-87 T 22-04-2016 JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 SUPERFAMILY SSF56420 1 162 4.19E-62 T 22-04-2016 IPR023635 Peptide deformylase JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 PRINTS PR01576 Peptide deformylase signature 102 120 3.9E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 PRINTS PR01576 Peptide deformylase signature 90 101 3.9E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 PRINTS PR01576 Peptide deformylase signature 121 150 3.9E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 PRINTS PR01576 Peptide deformylase signature 33 62 3.9E-37 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 PANTHER PTHR10458 1 165 9.7E-87 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 Gene3D G3DSA:3.90.45.10 5 165 3.1E-65 T 22-04-2016 IPR023635 Peptide deformylase JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 Pfam PF01327 Polypeptide deformylase 4 152 7.4E-51 T 22-04-2016 IPR023635 Peptide deformylase JE55_RS09215 862391d18bc8fcbd6e0cc6345f6df1ee 167 PIRSF PIRSF004749 1 167 1.6E-56 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS07640 00dcae15f1d506caed4a43d78de77c64 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 277 3.5E-16 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JE55_RS07640 00dcae15f1d506caed4a43d78de77c64 289 SUPERFAMILY SSF51735 1 158 1.97E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07640 00dcae15f1d506caed4a43d78de77c64 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 154 5.4E-34 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 JE55_RS07640 00dcae15f1d506caed4a43d78de77c64 289 SUPERFAMILY SSF48179 164 288 1.13E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS07640 00dcae15f1d506caed4a43d78de77c64 289 PANTHER PTHR22981:SF62 1 288 3.8E-88 T 22-04-2016 JE55_RS07640 00dcae15f1d506caed4a43d78de77c64 289 Gene3D G3DSA:1.10.1040.10 164 288 3.4E-28 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS07640 00dcae15f1d506caed4a43d78de77c64 289 PIRSF PIRSF000103 1 289 1.8E-68 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 JE55_RS07640 00dcae15f1d506caed4a43d78de77c64 289 Gene3D G3DSA:3.40.50.720 1 159 2.4E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07640 00dcae15f1d506caed4a43d78de77c64 289 PANTHER PTHR22981 1 288 3.8E-88 T 22-04-2016 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 SMART SM00562 3 140 4.6E-80 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 Gene3D G3DSA:3.30.70.141 1 138 5.1E-58 T 22-04-2016 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.1E-37 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.1E-37 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.1E-37 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.1E-37 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.1E-37 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 PANTHER PTHR11349 1 135 2.5E-65 T 22-04-2016 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 Pfam PF00334 Nucleoside diphosphate kinase 4 137 8.0E-55 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 SUPERFAMILY SSF54919 1 139 4.58E-57 T 22-04-2016 JE55_RS00170 0ee4cbccff027978e98b66f1847062ac 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.608 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS14425 876a29306addac0715d1f943661ae936 776 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 122 2.3E-16 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 JE55_RS14425 876a29306addac0715d1f943661ae936 776 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 626 4.0E-210 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 JE55_RS14425 876a29306addac0715d1f943661ae936 776 PANTHER PTHR11615:SF115 575 644 3.3E-167 T 22-04-2016 JE55_RS14425 876a29306addac0715d1f943661ae936 776 PANTHER PTHR11615:SF115 439 546 3.3E-167 T 22-04-2016 JE55_RS14425 876a29306addac0715d1f943661ae936 776 PANTHER PTHR11615:SF115 3 351 3.3E-167 T 22-04-2016 JE55_RS14425 876a29306addac0715d1f943661ae936 776 SUPERFAMILY SSF54862 75 211 1.3E-36 T 22-04-2016 JE55_RS14425 876a29306addac0715d1f943661ae936 776 SUPERFAMILY SSF53706 214 648 4.11E-95 T 22-04-2016 JE55_RS14425 876a29306addac0715d1f943661ae936 776 PANTHER PTHR11615 575 644 3.3E-167 T 22-04-2016 JE55_RS14425 876a29306addac0715d1f943661ae936 776 PANTHER PTHR11615 439 546 3.3E-167 T 22-04-2016 JE55_RS14425 876a29306addac0715d1f943661ae936 776 PANTHER PTHR11615 3 351 3.3E-167 T 22-04-2016 JE55_RS14425 876a29306addac0715d1f943661ae936 776 Gene3D G3DSA:3.40.50.740 273 412 6.4E-50 T 22-04-2016 JE55_RS14425 876a29306addac0715d1f943661ae936 776 Gene3D G3DSA:3.40.50.740 520 644 6.4E-50 T 22-04-2016 JE55_RS14425 876a29306addac0715d1f943661ae936 776 Pfam PF00384 Molybdopterin oxidoreductase 273 626 5.1E-34 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 JE55_RS14425 876a29306addac0715d1f943661ae936 776 SMART SM00929 83 123 6.5E-20 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 JE55_RS14425 876a29306addac0715d1f943661ae936 776 SUPERFAMILY SSF54292 1 74 4.18E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JE55_RS14425 876a29306addac0715d1f943661ae936 776 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 JE55_RS14425 876a29306addac0715d1f943661ae936 776 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 JE55_RS14425 876a29306addac0715d1f943661ae936 776 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 76 4.6E-20 T 22-04-2016 JE55_RS14425 876a29306addac0715d1f943661ae936 776 Gene3D G3DSA:3.10.20.30 2 55 4.5E-7 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS14425 876a29306addac0715d1f943661ae936 776 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 PANTHER PTHR32089 158 518 9.7E-147 T 22-04-2016 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 SUPERFAMILY SSF58104 235 516 5.89E-71 T 22-04-2016 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 Pfam PF02203 Tar ligand binding domain homologue 1 176 6.5E-47 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 SMART SM00304 215 267 1.6E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 Pfam PF00672 HAMP domain 197 261 2.9E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 PANTHER PTHR32089:SF48 158 518 9.7E-147 T 22-04-2016 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 SMART SM00283 268 515 7.7E-85 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 424 1.6E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 366 393 1.6E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 443 472 1.6E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 289 318 1.6E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 61 76 1.6E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 512 2.3E-58 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 SUPERFAMILY SSF47170 26 179 2.75E-20 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 Gene3D G3DSA:1.10.287.950 283 487 3.9E-61 T 22-04-2016 JE55_RS07945 c804221e8dba145d45ce406af85d17f5 671 Gene3D G3DSA:1.20.120.30 53 128 6.0E-5 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 JE55_RS14320 fb5ec8459358ec801d37dbbf90d7ebd7 338 SUPERFAMILY SSF48179 183 332 2.55E-71 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS14320 fb5ec8459358ec801d37dbbf90d7ebd7 338 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 328 45.406 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS14320 fb5ec8459358ec801d37dbbf90d7ebd7 338 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 5.7E-73 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS14320 fb5ec8459358ec801d37dbbf90d7ebd7 338 PANTHER PTHR21371 1 337 1.4E-187 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS14320 fb5ec8459358ec801d37dbbf90d7ebd7 338 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 326 8.2E-67 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS14320 fb5ec8459358ec801d37dbbf90d7ebd7 338 Gene3D G3DSA:1.10.1040.10 39 325 6.1E-115 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS14320 fb5ec8459358ec801d37dbbf90d7ebd7 338 Gene3D G3DSA:3.50.50.60 6 38 3.4E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS14320 fb5ec8459358ec801d37dbbf90d7ebd7 338 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 326 5.1E-135 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS14320 fb5ec8459358ec801d37dbbf90d7ebd7 338 SUPERFAMILY SSF51735 1 182 6.65E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS16935 69685b6c497930a766103a4d803a5d02 223 SUPERFAMILY SSF46689 1 72 2.19E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS16935 69685b6c497930a766103a4d803a5d02 223 SUPERFAMILY SSF48498 81 199 1.57E-11 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS16935 69685b6c497930a766103a4d803a5d02 223 Gene3D G3DSA:1.10.357.10 1 194 1.7E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS16935 69685b6c497930a766103a4d803a5d02 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 57 1.1E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS16935 69685b6c497930a766103a4d803a5d02 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.3E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS16935 69685b6c497930a766103a4d803a5d02 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.3E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS16935 69685b6c497930a766103a4d803a5d02 223 PANTHER PTHR30055 1 194 5.9E-28 T 22-04-2016 JE55_RS16935 69685b6c497930a766103a4d803a5d02 223 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 83 199 2.9E-10 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 JE55_RS16935 69685b6c497930a766103a4d803a5d02 223 PANTHER PTHR30055:SF66 1 194 5.9E-28 T 22-04-2016 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 PANTHER PTHR24423 409 665 1.5E-70 T 22-04-2016 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 PANTHER PTHR24423 132 229 1.5E-70 T 22-04-2016 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 Gene3D G3DSA:1.10.287.130 429 483 2.7E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 Pfam PF00512 His Kinase A (phospho-acceptor) domain 432 492 1.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 PANTHER PTHR24423:SF451 409 665 1.5E-70 T 22-04-2016 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 PANTHER PTHR24423:SF451 132 229 1.5E-70 T 22-04-2016 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 SMART SM00388 432 500 1.6E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 SUPERFAMILY SSF55874 526 666 7.33E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 Gene3D G3DSA:3.30.565.10 484 515 3.7E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 Gene3D G3DSA:3.30.565.10 550 669 3.7E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 SMART SM00387 557 667 3.5E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 SUPERFAMILY SSF47384 416 494 4.71E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 Pfam PF02743 Cache domain 84 265 1.3E-13 T 22-04-2016 IPR033479 Double Cache domain 1 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 624 3.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 664 3.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 645 3.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 610 3.4E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 SUPERFAMILY SSF103190 99 231 2.16E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 560 665 2.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 Gene3D G3DSA:3.30.450.20 137 226 1.0E-4 T 22-04-2016 JE55_RS10600 4f20569a295a6722ffdec41c0a7b6728 677 PIRSF PIRSF036431 37 674 5.2E-242 T 22-04-2016 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) JE55_RS07120 6fc9025a04f6fca576975552007a7d35 243 Gene3D G3DSA:2.40.160.20 25 243 1.4E-64 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS07120 6fc9025a04f6fca576975552007a7d35 243 Pfam PF03922 OmpW family 27 243 1.5E-29 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 JE55_RS07120 6fc9025a04f6fca576975552007a7d35 243 PANTHER PTHR36920 3 243 9.7E-33 T 22-04-2016 JE55_RS07120 6fc9025a04f6fca576975552007a7d35 243 PANTHER PTHR36920:SF1 3 243 9.7E-33 T 22-04-2016 JE55_RS07120 6fc9025a04f6fca576975552007a7d35 243 SUPERFAMILY SSF56925 25 243 7.85E-23 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 335 351 1.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 428 441 1.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 402 417 1.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 296 313 1.3E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 PANTHER PTHR22642:SF7 25 297 2.0E-257 T 22-04-2016 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 PANTHER PTHR22642:SF7 321 502 2.0E-257 T 22-04-2016 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 SUPERFAMILY SSF51338 421 478 1.89E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 PANTHER PTHR22642 25 297 2.0E-257 T 22-04-2016 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 PANTHER PTHR22642 321 502 2.0E-257 T 22-04-2016 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 SUPERFAMILY SSF51556 130 433 2.63E-203 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 SUPERFAMILY SSF51556 482 568 2.63E-203 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 5 568 4.2E-299 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 Pfam PF01979 Amidohydrolase family 126 454 2.3E-82 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 120 6.6E-56 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 SUPERFAMILY SSF51338 4 178 1.98E-62 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 ProSitePatterns PS01120 Urease nickel ligands signature. 128 141 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 Gene3D G3DSA:2.30.40.10 69 144 3.7E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 Hamap MF_01953 Urease subunit alpha [ureC]. 3 568 57.776 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 ProSitePatterns PS00145 Urease active site. 318 334 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 Gene3D G3DSA:3.20.20.140 145 430 6.5E-215 T 22-04-2016 JE55_RS04295 cb3befe723833e85ccf414c931be80a7 568 Gene3D G3DSA:3.20.20.140 489 566 6.5E-215 T 22-04-2016 JE55_RS11635 9003b4648dc0e9296075ae27a1eb1497 274 SUPERFAMILY SSF53927 14 271 5.11E-72 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 JE55_RS11635 9003b4648dc0e9296075ae27a1eb1497 274 PIRSF PIRSF015626 2 274 1.3E-83 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 JE55_RS11635 9003b4648dc0e9296075ae27a1eb1497 274 Pfam PF02634 FdhD/NarQ family 34 267 1.5E-68 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 JE55_RS11635 9003b4648dc0e9296075ae27a1eb1497 274 Gene3D G3DSA:3.40.140.10 146 271 1.5E-45 T 22-04-2016 JE55_RS11635 9003b4648dc0e9296075ae27a1eb1497 274 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 30 265 4.8E-61 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 JE55_RS11635 9003b4648dc0e9296075ae27a1eb1497 274 PANTHER PTHR30592:SF1 1 268 2.1E-87 T 22-04-2016 JE55_RS11635 9003b4648dc0e9296075ae27a1eb1497 274 Gene3D G3DSA:3.10.20.10 35 124 4.9E-28 T 22-04-2016 JE55_RS11635 9003b4648dc0e9296075ae27a1eb1497 274 Hamap MF_00187 Protein FdhD [fdhD]. 5 274 30.817 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 JE55_RS11635 9003b4648dc0e9296075ae27a1eb1497 274 PANTHER PTHR30592 1 268 2.1E-87 T 22-04-2016 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 SUPERFAMILY SSF54373 290 472 8.04E-51 T 22-04-2016 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 Gene3D G3DSA:3.50.50.60 188 313 2.1E-115 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 Gene3D G3DSA:3.50.50.60 465 529 2.1E-115 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 Gene3D G3DSA:3.50.50.60 2 127 2.1E-115 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 254 268 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 PIRSF PIRSF000137 1 536 3.4E-144 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 Pfam PF00732 GMC oxidoreductase 3 295 4.3E-83 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 Pfam PF05199 GMC oxidoreductase 387 522 3.4E-41 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 SUPERFAMILY SSF51905 468 529 7.63E-87 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 SUPERFAMILY SSF51905 1 283 7.63E-87 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 83 106 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 JE55_RS09520 0761ca7be8febdfa3d184ecc9ed383af 547 PANTHER PTHR11552 1 545 2.1E-196 T 22-04-2016 JE55_RS17360 20e01ef4515ae6c7287983c1d6f96868 407 Gene3D G3DSA:2.40.160.10 38 407 1.1E-98 T 22-04-2016 IPR023614 Porin domain JE55_RS17360 20e01ef4515ae6c7287983c1d6f96868 407 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 349 366 2.5E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS17360 20e01ef4515ae6c7287983c1d6f96868 407 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 120 130 2.5E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS17360 20e01ef4515ae6c7287983c1d6f96868 407 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 182 193 2.5E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS17360 20e01ef4515ae6c7287983c1d6f96868 407 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 210 222 2.5E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS17360 20e01ef4515ae6c7287983c1d6f96868 407 SUPERFAMILY SSF56935 38 407 1.94E-82 T 22-04-2016 JE55_RS17360 20e01ef4515ae6c7287983c1d6f96868 407 Pfam PF13609 Gram-negative porin 22 373 2.9E-44 T 22-04-2016 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 12 393 2.3E-119 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 PANTHER PTHR13789 1 393 2.2E-92 T 22-04-2016 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 298 311 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 Pfam PF01494 FAD binding domain 11 348 1.9E-27 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 PANTHER PTHR13789:SF5 1 393 2.2E-92 T 22-04-2016 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 1.9E-20 T 22-04-2016 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 1.9E-20 T 22-04-2016 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 1.9E-20 T 22-04-2016 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 1.9E-20 T 22-04-2016 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 SUPERFAMILY SSF51905 271 387 6.33E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 SUPERFAMILY SSF51905 11 181 6.33E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 Gene3D G3DSA:3.50.50.60 11 186 1.0E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS06495 bc92cc1892c0f408f99c3bfb715a2fe2 393 Gene3D G3DSA:3.50.50.60 272 359 1.0E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02670 5617b4cac6dd05a69145642d0f2e1ef8 446 Pfam PF04996 Succinylarginine dihydrolase 3 445 2.6E-216 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 JE55_RS02670 5617b4cac6dd05a69145642d0f2e1ef8 446 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 3 445 2.7E-244 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 JE55_RS02670 5617b4cac6dd05a69145642d0f2e1ef8 446 Gene3D G3DSA:3.75.10.20 1 446 3.1E-222 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 JE55_RS02670 5617b4cac6dd05a69145642d0f2e1ef8 446 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 446 59.572 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 JE55_RS02670 5617b4cac6dd05a69145642d0f2e1ef8 446 SUPERFAMILY SSF55909 3 446 3.92E-203 T 22-04-2016 JE55_RS02670 5617b4cac6dd05a69145642d0f2e1ef8 446 PANTHER PTHR30420:SF2 2 446 6.5E-263 T 22-04-2016 JE55_RS02670 5617b4cac6dd05a69145642d0f2e1ef8 446 PANTHER PTHR30420 2 446 6.5E-263 T 22-04-2016 JE55_RS04185 9c1076412456d27c784ebe6b869a35bb 406 Gene3D G3DSA:3.40.50.200 63 403 8.3E-70 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JE55_RS04185 9c1076412456d27c784ebe6b869a35bb 406 PANTHER PTHR14218:SF15 62 405 8.1E-34 T 22-04-2016 JE55_RS04185 9c1076412456d27c784ebe6b869a35bb 406 PANTHER PTHR14218 62 405 8.1E-34 T 22-04-2016 JE55_RS04185 9c1076412456d27c784ebe6b869a35bb 406 SUPERFAMILY SSF52743 71 402 7.2E-55 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JE55_RS14205 c242ee7f76c9313e9f0d28c06c1936b2 232 Pfam PF00072 Response regulator receiver domain 8 117 1.3E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS14205 c242ee7f76c9313e9f0d28c06c1936b2 232 SMART SM00862 152 228 1.5E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS14205 c242ee7f76c9313e9f0d28c06c1936b2 232 Gene3D G3DSA:3.40.50.2300 4 125 6.2E-37 T 22-04-2016 JE55_RS14205 c242ee7f76c9313e9f0d28c06c1936b2 232 Gene3D G3DSA:1.10.10.10 130 229 1.3E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14205 c242ee7f76c9313e9f0d28c06c1936b2 232 SUPERFAMILY SSF52172 4 127 1.14E-37 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS14205 c242ee7f76c9313e9f0d28c06c1936b2 232 PANTHER PTHR26402 6 231 5.9E-96 T 22-04-2016 JE55_RS14205 c242ee7f76c9313e9f0d28c06c1936b2 232 SUPERFAMILY SSF46894 129 229 3.4E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS14205 c242ee7f76c9313e9f0d28c06c1936b2 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.3E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS14205 c242ee7f76c9313e9f0d28c06c1936b2 232 PANTHER PTHR26402:SF516 6 231 5.9E-96 T 22-04-2016 JE55_RS14205 c242ee7f76c9313e9f0d28c06c1936b2 232 SMART SM00448 6 116 7.1E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS10865 7589855db7d9cee3e5cd041c827be170 450 Pfam PF00202 Aminotransferase class-III 25 435 7.2E-94 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS10865 7589855db7d9cee3e5cd041c827be170 450 Gene3D G3DSA:3.40.640.10 62 312 6.5E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS10865 7589855db7d9cee3e5cd041c827be170 450 PANTHER PTHR11986 12 446 4.8E-154 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS10865 7589855db7d9cee3e5cd041c827be170 450 SUPERFAMILY SSF53383 16 438 5.25E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS10865 7589855db7d9cee3e5cd041c827be170 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 285 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS10865 7589855db7d9cee3e5cd041c827be170 450 Gene3D G3DSA:3.90.1150.10 313 441 1.4E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS10865 7589855db7d9cee3e5cd041c827be170 450 PANTHER PTHR11986:SF7 12 446 4.8E-154 T 22-04-2016 JE55_RS10865 7589855db7d9cee3e5cd041c827be170 450 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 14 433 1.1E-154 T 22-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 JE55_RS27750 287f08766a06766a94f20df2b342166f 317 Pfam PF02310 B12 binding domain 2 77 3.0E-9 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 JE55_RS27750 287f08766a06766a94f20df2b342166f 317 Gene3D G3DSA:3.10.196.10 197 310 2.5E-33 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 JE55_RS27750 287f08766a06766a94f20df2b342166f 317 SUPERFAMILY SSF52242 1 134 1.57E-30 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 JE55_RS27750 287f08766a06766a94f20df2b342166f 317 Gene3D G3DSA:3.40.50.280 1 135 1.4E-48 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 JE55_RS27750 287f08766a06766a94f20df2b342166f 317 SUPERFAMILY SSF56507 142 316 2.09E-51 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 JE55_RS27750 287f08766a06766a94f20df2b342166f 317 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 177 316 4.0E-46 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 JE55_RS06890 2ea21e086ce52fb3d15522eb7c71285c 348 Gene3D G3DSA:1.10.150.130 60 159 8.0E-10 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal JE55_RS06890 2ea21e086ce52fb3d15522eb7c71285c 348 PANTHER PTHR30349 59 346 2.0E-48 T 22-04-2016 JE55_RS06890 2ea21e086ce52fb3d15522eb7c71285c 348 PANTHER PTHR30349:SF20 59 346 2.0E-48 T 22-04-2016 JE55_RS06890 2ea21e086ce52fb3d15522eb7c71285c 348 Gene3D G3DSA:1.10.443.10 166 341 7.0E-41 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS06890 2ea21e086ce52fb3d15522eb7c71285c 348 Pfam PF00589 Phage integrase family 167 334 5.5E-30 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS06890 2ea21e086ce52fb3d15522eb7c71285c 348 SUPERFAMILY SSF56349 59 341 1.91E-64 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 Pfam PF00270 DEAD/DEAH box helicase 605 762 4.9E-17 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 SUPERFAMILY SSF52540 783 990 4.76E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 Gene3D G3DSA:3.40.50.300 590 786 4.5E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 SUPERFAMILY SSF52540 523 783 5.63E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 SUPERFAMILY SSF52540 15 351 8.5E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 PANTHER PTHR14025 383 1141 0.0 T 22-04-2016 JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 SMART SM01058 479 576 7.3E-50 T 22-04-2016 IPR003711 CarD-like/TRCF domain JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 Gene3D G3DSA:3.40.50.300 796 956 1.1E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 SUPERFAMILY SSF52540 356 464 4.09E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 155 1081 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 SMART SM00490 826 910 4.4E-17 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 PANTHER PTHR14025:SF21 383 1141 0.0 T 22-04-2016 JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 SMART SM00982 1008 1108 1.3E-45 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 Gene3D G3DSA:3.30.2060.10 138 211 1.7E-12 T 22-04-2016 JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 SUPERFAMILY SSF143517 994 1145 3.01E-39 T 22-04-2016 JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 SMART SM00487 600 790 8.7E-32 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 SUPERFAMILY SSF141259 471 548 1.96E-23 T 22-04-2016 IPR003711 CarD-like/TRCF domain JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 Pfam PF02559 CarD-like/TRCF domain 480 575 9.7E-27 T 22-04-2016 IPR003711 CarD-like/TRCF domain JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 Pfam PF03461 TRCF domain 1009 1101 2.0E-25 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 Pfam PF00271 Helicase conserved C-terminal domain 806 909 1.0E-17 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS00885 c198c56a3f610f64e833d26dd0b0bf39 1157 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 43 1144 28.122 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 Gene3D G3DSA:3.30.930.10 391 473 3.6E-107 T 22-04-2016 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 Gene3D G3DSA:3.30.930.10 10 234 3.6E-107 T 22-04-2016 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 461 8.0E-47 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 SUPERFAMILY SSF52954 465 572 9.65E-31 T 22-04-2016 IPR004154 Anticodon-binding JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 Gene3D G3DSA:3.40.50.800 474 573 3.3E-30 T 22-04-2016 IPR004154 Anticodon-binding JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 Pfam PF04073 Aminoacyl-tRNA editing domain 257 381 2.7E-27 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 PANTHER PTHR11451:SF3 4 244 4.4E-151 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 PANTHER PTHR11451:SF3 401 573 4.4E-151 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.1E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.1E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.1E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.1E-19 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 SUPERFAMILY SSF55826 218 392 2.49E-36 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 566 9.3E-235 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 Pfam PF03129 Anticodon binding domain 478 570 3.6E-16 T 22-04-2016 IPR004154 Anticodon-binding JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 573 42.136 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 PIRSF PIRSF001535 1 576 1.2E-272 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 PANTHER PTHR11451 4 244 4.4E-151 T 22-04-2016 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 PANTHER PTHR11451 401 573 4.4E-151 T 22-04-2016 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 Gene3D G3DSA:3.90.960.10 251 390 3.4E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 SUPERFAMILY SSF55681 409 479 4.02E-103 T 22-04-2016 JE55_RS06085 a7e71b0f87fdc02e8649bf8a72a7571c 578 SUPERFAMILY SSF55681 10 237 4.02E-103 T 22-04-2016 JE55_RS10265 25cb16ab4be374d46a970a509b6dd2b6 479 Gene3D G3DSA:3.40.720.10 35 479 1.5E-148 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 JE55_RS10265 25cb16ab4be374d46a970a509b6dd2b6 479 SMART SM00098 41 479 2.1E-101 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10265 25cb16ab4be374d46a970a509b6dd2b6 479 SUPERFAMILY SSF53649 36 478 4.52E-134 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 JE55_RS10265 25cb16ab4be374d46a970a509b6dd2b6 479 Pfam PF00245 Alkaline phosphatase 40 479 7.1E-108 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10265 25cb16ab4be374d46a970a509b6dd2b6 479 PRINTS PR00113 Alkaline phosphatase signature 145 165 6.2E-41 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10265 25cb16ab4be374d46a970a509b6dd2b6 479 PRINTS PR00113 Alkaline phosphatase signature 40 60 6.2E-41 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10265 25cb16ab4be374d46a970a509b6dd2b6 479 PRINTS PR00113 Alkaline phosphatase signature 277 306 6.2E-41 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10265 25cb16ab4be374d46a970a509b6dd2b6 479 PRINTS PR00113 Alkaline phosphatase signature 199 209 6.2E-41 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10265 25cb16ab4be374d46a970a509b6dd2b6 479 PANTHER PTHR11596 37 479 4.0E-157 T 22-04-2016 JE55_RS06655 22655790f4a71591f7a63306b216b516 214 PANTHER PTHR30055:SF47 16 190 7.2E-33 T 22-04-2016 JE55_RS06655 22655790f4a71591f7a63306b216b516 214 PANTHER PTHR30055 16 190 7.2E-33 T 22-04-2016 JE55_RS06655 22655790f4a71591f7a63306b216b516 214 Gene3D G3DSA:1.10.357.10 32 196 3.6E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS06655 22655790f4a71591f7a63306b216b516 214 SUPERFAMILY SSF48498 104 194 2.14E-15 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS06655 22655790f4a71591f7a63306b216b516 214 SUPERFAMILY SSF46689 22 101 2.62E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS06655 22655790f4a71591f7a63306b216b516 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 48 1.3E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS06655 22655790f4a71591f7a63306b216b516 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 56 79 1.3E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS06655 22655790f4a71591f7a63306b216b516 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 80 6.1E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS01120 a918f673700cdb3caccfd8bf9bab1487 262 SUPERFAMILY SSF75217 98 258 4.19E-42 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases JE55_RS01120 a918f673700cdb3caccfd8bf9bab1487 262 Gene3D G3DSA:3.40.1280.10 114 258 2.2E-47 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS01120 a918f673700cdb3caccfd8bf9bab1487 262 SUPERFAMILY SSF55315 3 103 1.53E-15 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like JE55_RS01120 a918f673700cdb3caccfd8bf9bab1487 262 Gene3D G3DSA:3.30.1330.30 3 103 4.0E-11 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like JE55_RS01120 a918f673700cdb3caccfd8bf9bab1487 262 Pfam PF00588 SpoU rRNA Methylase family 115 251 1.6E-32 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JE55_RS01120 a918f673700cdb3caccfd8bf9bab1487 262 PANTHER PTHR12029 1 258 7.3E-41 T 22-04-2016 JE55_RS15555 9c71ae53d67f7822196d4d6182771f05 509 SMART SM00028 77 110 0.044 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS15555 9c71ae53d67f7822196d4d6182771f05 509 SMART SM00028 145 178 36.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS15555 9c71ae53d67f7822196d4d6182771f05 509 SMART SM00028 43 76 71.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS15555 9c71ae53d67f7822196d4d6182771f05 509 SMART SM00028 9 42 41.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS15555 9c71ae53d67f7822196d4d6182771f05 509 Gene3D G3DSA:1.25.40.10 10 188 8.5E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS15555 9c71ae53d67f7822196d4d6182771f05 509 SUPERFAMILY SSF53756 232 481 1.07E-16 T 22-04-2016 JE55_RS15555 9c71ae53d67f7822196d4d6182771f05 509 PANTHER PTHR23083 9 208 9.4E-22 T 22-04-2016 JE55_RS15555 9c71ae53d67f7822196d4d6182771f05 509 Gene3D G3DSA:3.40.50.2000 414 477 2.8E-10 T 22-04-2016 JE55_RS15555 9c71ae53d67f7822196d4d6182771f05 509 Gene3D G3DSA:3.40.50.2000 341 378 2.8E-10 T 22-04-2016 JE55_RS15555 9c71ae53d67f7822196d4d6182771f05 509 SUPERFAMILY SSF48452 10 175 4.49E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS16035 ef76f583c0f65646f44884fbc6f652b7 313 SUPERFAMILY SSF46785 4 86 1.25E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16035 ef76f583c0f65646f44884fbc6f652b7 313 Gene3D G3DSA:3.40.190.10 179 263 1.9E-15 T 22-04-2016 JE55_RS16035 ef76f583c0f65646f44884fbc6f652b7 313 Gene3D G3DSA:3.40.190.10 92 178 1.2E-21 T 22-04-2016 JE55_RS16035 ef76f583c0f65646f44884fbc6f652b7 313 Gene3D G3DSA:1.10.10.10 3 86 2.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16035 ef76f583c0f65646f44884fbc6f652b7 313 PANTHER PTHR30126 1 309 5.6E-142 T 22-04-2016 JE55_RS16035 ef76f583c0f65646f44884fbc6f652b7 313 PANTHER PTHR30126:SF26 1 309 5.6E-142 T 22-04-2016 JE55_RS16035 ef76f583c0f65646f44884fbc6f652b7 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS16035 ef76f583c0f65646f44884fbc6f652b7 313 SUPERFAMILY SSF53850 90 298 1.18E-40 T 22-04-2016 JE55_RS16035 ef76f583c0f65646f44884fbc6f652b7 313 Pfam PF03466 LysR substrate binding domain 88 295 7.4E-42 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 SUPERFAMILY SSF51230 3 94 2.62E-23 T 22-04-2016 IPR011053 Single hybrid motif JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 PANTHER PTHR23151:SF68 24 284 2.0E-253 T 22-04-2016 JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 PANTHER PTHR23151:SF68 302 546 2.0E-253 T 22-04-2016 JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 Gene3D G3DSA:4.10.320.10 237 283 1.2E-18 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 320 545 5.7E-81 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 SUPERFAMILY SSF51230 117 210 1.44E-24 T 22-04-2016 IPR011053 Single hybrid motif JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 Pfam PF02817 e3 binding domain 244 277 2.2E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 101 546 9.8E-195 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 SUPERFAMILY SSF47005 241 282 1.02E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 Gene3D G3DSA:2.40.50.100 5 79 8.2E-23 T 22-04-2016 JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 Gene3D G3DSA:2.40.50.100 118 194 1.3E-22 T 22-04-2016 JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 PANTHER PTHR23151 24 284 2.0E-253 T 22-04-2016 JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 PANTHER PTHR23151 302 546 2.0E-253 T 22-04-2016 JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 Gene3D G3DSA:3.30.559.10 309 545 1.0E-86 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 141 170 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 Pfam PF00364 Biotin-requiring enzyme 6 76 1.1E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 Pfam PF00364 Biotin-requiring enzyme 119 190 6.4E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment JE55_RS02220 6aecc9e2d7be6cc70e223b9e87ceb6fd 546 SUPERFAMILY SSF52777 308 546 9.78E-86 T 22-04-2016 JE55_RS08360 0901c24f1e40c3640bf8c42e59d3d9ea 546 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 288 438 1.6E-37 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS08360 0901c24f1e40c3640bf8c42e59d3d9ea 546 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 179 278 1.5E-14 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS08360 0901c24f1e40c3640bf8c42e59d3d9ea 546 Gene3D G3DSA:1.20.140.10 280 443 5.5E-44 T 22-04-2016 JE55_RS08360 0901c24f1e40c3640bf8c42e59d3d9ea 546 Gene3D G3DSA:2.40.110.10 179 279 1.3E-19 T 22-04-2016 JE55_RS08360 0901c24f1e40c3640bf8c42e59d3d9ea 546 SUPERFAMILY SSF47203 286 442 3.54E-40 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS08360 0901c24f1e40c3640bf8c42e59d3d9ea 546 SUPERFAMILY SSF56645 52 295 3.95E-35 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS08360 0901c24f1e40c3640bf8c42e59d3d9ea 546 PANTHER PTHR10909:SF289 29 458 4.5E-156 T 22-04-2016 JE55_RS08360 0901c24f1e40c3640bf8c42e59d3d9ea 546 PANTHER PTHR10909 29 458 4.5E-156 T 22-04-2016 JE55_RS08360 0901c24f1e40c3640bf8c42e59d3d9ea 546 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 397 416 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JE55_RS06925 cb5fae08ef64932b75728a0afba571fc 248 Gene3D G3DSA:3.40.1390.30 108 215 1.0E-32 T 22-04-2016 JE55_RS06925 cb5fae08ef64932b75728a0afba571fc 248 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 246 1.9E-61 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JE55_RS06925 cb5fae08ef64932b75728a0afba571fc 248 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 9 236 2.2E-61 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JE55_RS06925 cb5fae08ef64932b75728a0afba571fc 248 SUPERFAMILY SSF102705 1 247 2.35E-80 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JE55_RS06925 cb5fae08ef64932b75728a0afba571fc 248 PANTHER PTHR13799 1 245 9.0E-77 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JE55_RS06925 cb5fae08ef64932b75728a0afba571fc 248 Gene3D G3DSA:3.40.1390.30 1 107 1.3E-36 T 22-04-2016 JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 PIRSF PIRSF001549 8 437 4.1E-115 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 9 435 32.323 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 PANTHER PTHR11476 1 441 6.4E-199 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 SUPERFAMILY SSF55681 14 328 1.68E-98 T 22-04-2016 JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 14 412 1.4E-151 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 SUPERFAMILY SSF52954 333 435 3.32E-21 T 22-04-2016 IPR004154 Anticodon-binding JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 Pfam PF03129 Anticodon binding domain 336 435 4.5E-10 T 22-04-2016 IPR004154 Anticodon-binding JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 Gene3D G3DSA:3.40.50.800 331 434 8.1E-33 T 22-04-2016 IPR004154 Anticodon-binding JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 Pfam PF13393 Histidyl-tRNA synthetase 16 318 2.7E-50 T 22-04-2016 JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 PANTHER PTHR11476:SF9 1 441 6.4E-199 T 22-04-2016 JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 Gene3D G3DSA:3.30.930.10 227 330 5.4E-91 T 22-04-2016 JE55_RS00150 cbb2293c56c05382b7d85c41bb2b7e26 446 Gene3D G3DSA:3.30.930.10 14 191 5.4E-91 T 22-04-2016 JE55_RS08510 c0d6573f1648ae30670a14379782d238 324 Pfam PF02653 Branched-chain amino acid transport system / permease component 27 302 8.9E-34 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS08510 c0d6573f1648ae30670a14379782d238 324 PANTHER PTHR30482:SF8 14 323 5.0E-112 T 22-04-2016 JE55_RS08510 c0d6573f1648ae30670a14379782d238 324 PANTHER PTHR30482 14 323 5.0E-112 T 22-04-2016 JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 PANTHER PTHR10937:SF0 1 92 1.3E-281 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 PANTHER PTHR10937:SF0 124 638 1.3E-281 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 SUPERFAMILY SSF53697 276 638 9.28E-107 T 22-04-2016 JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 Gene3D G3DSA:3.40.50.10490 472 638 1.2E-58 T 22-04-2016 JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 Pfam PF01380 SIS domain 318 445 5.2E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 Pfam PF01380 SIS domain 491 620 7.9E-22 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 Gene3D G3DSA:3.60.20.10 125 267 1.8E-73 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 Gene3D G3DSA:3.60.20.10 2 90 1.8E-73 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 PANTHER PTHR10937 1 92 1.3E-281 T 22-04-2016 JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 PANTHER PTHR10937 124 638 1.3E-281 T 22-04-2016 JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 Pfam PF13537 Glutamine amidotransferase domain 122 228 8.5E-16 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 SUPERFAMILY SSF56235 1 88 2.22E-41 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 SUPERFAMILY SSF56235 127 255 2.22E-41 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 Gene3D G3DSA:3.40.50.10490 275 471 1.1E-66 T 22-04-2016 JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 111 638 1.7E-190 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 JE55_RS14975 cdf870e712d56b3a4b1823ec9d724665 638 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 638 37.284 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 JE55_RS07030 afd1f9bc34853bdb3a06a053c1c349b2 308 PANTHER PTHR24220 5 230 3.3E-100 T 22-04-2016 JE55_RS07030 afd1f9bc34853bdb3a06a053c1c349b2 308 Gene3D G3DSA:3.40.50.300 3 224 8.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07030 afd1f9bc34853bdb3a06a053c1c349b2 308 PANTHER PTHR24220:SF305 5 230 3.3E-100 T 22-04-2016 JE55_RS07030 afd1f9bc34853bdb3a06a053c1c349b2 308 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS07030 afd1f9bc34853bdb3a06a053c1c349b2 308 SUPERFAMILY SSF52540 3 227 7.79E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07030 afd1f9bc34853bdb3a06a053c1c349b2 308 SMART SM00382 28 217 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS07030 afd1f9bc34853bdb3a06a053c1c349b2 308 Pfam PF00005 ABC transporter 19 161 3.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS11695 a35786d4ba6ff842ae3b8644b0f24174 129 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 127 4.7E-67 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 JE55_RS11695 a35786d4ba6ff842ae3b8644b0f24174 129 PANTHER PTHR10374 1 125 1.1E-62 T 22-04-2016 JE55_RS11695 a35786d4ba6ff842ae3b8644b0f24174 129 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 JE55_RS11695 a35786d4ba6ff842ae3b8644b0f24174 129 Gene3D G3DSA:3.10.180.10 1 127 6.1E-49 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS11695 a35786d4ba6ff842ae3b8644b0f24174 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.7E-26 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JE55_RS11695 a35786d4ba6ff842ae3b8644b0f24174 129 SUPERFAMILY SSF54593 1 126 3.62E-39 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS27130 7efdfd085c0bf6c25f5bb07250f8ea25 129 PANTHER PTHR30381 25 128 2.6E-47 T 22-04-2016 JE55_RS27130 7efdfd085c0bf6c25f5bb07250f8ea25 129 Pfam PF02119 Flagellar P-ring protein 39 129 3.4E-34 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS27130 7efdfd085c0bf6c25f5bb07250f8ea25 129 PANTHER PTHR30381:SF1 25 128 2.6E-47 T 22-04-2016 JE55_RS27130 7efdfd085c0bf6c25f5bb07250f8ea25 129 PRINTS PR01010 Flagellar P-ring protein signature 54 69 2.7E-24 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS27130 7efdfd085c0bf6c25f5bb07250f8ea25 129 PRINTS PR01010 Flagellar P-ring protein signature 74 89 2.7E-24 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS27130 7efdfd085c0bf6c25f5bb07250f8ea25 129 PRINTS PR01010 Flagellar P-ring protein signature 39 54 2.7E-24 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.8E-17 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 SUPERFAMILY SSF52540 97 302 6.04E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 SMART SM00962 104 300 8.2E-114 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 Gene3D G3DSA:1.20.120.140 2 88 2.0E-31 T 22-04-2016 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 SMART SM00382 103 305 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 434 4.1E-172 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 451 33.081 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 SMART SM00963 1 86 3.5E-29 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 PANTHER PTHR11564 1 439 1.3E-242 T 22-04-2016 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 Gene3D G3DSA:1.10.260.30 333 436 4.1E-38 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 SUPERFAMILY SSF47446 302 435 1.03E-43 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 Pfam PF00448 SRP54-type protein, GTPase domain 105 300 3.5E-71 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 SUPERFAMILY SSF47364 1 90 8.9E-25 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 PANTHER PTHR11564:SF7 1 439 1.3E-242 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 Pfam PF02978 Signal peptide binding domain 333 432 2.4E-32 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 JE55_RS06070 eccdbee794df94f47aa9f01d7d7a9289 455 Gene3D G3DSA:3.40.50.300 98 301 8.9E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00240 ef205f0fd45b23b3e6b4e9618efa50b4 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 6.0E-40 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JE55_RS00240 ef205f0fd45b23b3e6b4e9618efa50b4 108 Pfam PF00085 Thioredoxin 5 107 2.8E-35 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 JE55_RS00240 ef205f0fd45b23b3e6b4e9618efa50b4 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 JE55_RS00240 ef205f0fd45b23b3e6b4e9618efa50b4 108 PANTHER PTHR10438 4 108 3.0E-41 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JE55_RS00240 ef205f0fd45b23b3e6b4e9618efa50b4 108 PIRSF PIRSF000077 2 108 1.8E-45 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JE55_RS00240 ef205f0fd45b23b3e6b4e9618efa50b4 108 PRINTS PR00421 Thioredoxin family signature 72 83 7.7E-10 T 22-04-2016 JE55_RS00240 ef205f0fd45b23b3e6b4e9618efa50b4 108 PRINTS PR00421 Thioredoxin family signature 24 32 7.7E-10 T 22-04-2016 JE55_RS00240 ef205f0fd45b23b3e6b4e9618efa50b4 108 PRINTS PR00421 Thioredoxin family signature 32 41 7.7E-10 T 22-04-2016 JE55_RS00240 ef205f0fd45b23b3e6b4e9618efa50b4 108 Gene3D G3DSA:3.40.30.10 2 108 4.3E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS00240 ef205f0fd45b23b3e6b4e9618efa50b4 108 SUPERFAMILY SSF52833 3 108 2.6E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS13420 ff5dac1c77f580deb76036b1b36c6739 567 PANTHER PTHR23090 2 93 1.1E-160 T 22-04-2016 JE55_RS13420 ff5dac1c77f580deb76036b1b36c6739 567 PANTHER PTHR23090 116 562 1.1E-160 T 22-04-2016 JE55_RS13420 ff5dac1c77f580deb76036b1b36c6739 567 SUPERFAMILY SSF56317 3 268 3.79E-61 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS13420 ff5dac1c77f580deb76036b1b36c6739 567 Gene3D G3DSA:3.40.50.620 282 546 1.8E-77 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13420 ff5dac1c77f580deb76036b1b36c6739 567 Pfam PF02540 NAD synthase 286 539 5.6E-72 T 22-04-2016 IPR022310 NAD/GMP synthase JE55_RS13420 ff5dac1c77f580deb76036b1b36c6739 567 Gene3D G3DSA:3.60.110.10 1 267 5.1E-67 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS13420 ff5dac1c77f580deb76036b1b36c6739 567 Pfam PF00795 Carbon-nitrogen hydrolase 4 267 4.8E-27 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS13420 ff5dac1c77f580deb76036b1b36c6739 567 TIGRFAM TIGR00552 nadE: NAD+ synthetase 293 542 6.0E-60 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 JE55_RS13420 ff5dac1c77f580deb76036b1b36c6739 567 SUPERFAMILY SSF52402 282 547 1.7E-77 T 22-04-2016 JE55_RS04500 a1c5c7203ddea348e8bf27e048d13c0b 144 SUPERFAMILY SSF46785 9 112 1.88E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04500 a1c5c7203ddea348e8bf27e048d13c0b 144 Pfam PF01638 HxlR-like helix-turn-helix 20 108 4.2E-34 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type JE55_RS04500 a1c5c7203ddea348e8bf27e048d13c0b 144 PANTHER PTHR33204 4 106 2.9E-49 T 22-04-2016 JE55_RS04500 a1c5c7203ddea348e8bf27e048d13c0b 144 Gene3D G3DSA:1.10.10.10 8 109 1.2E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04500 a1c5c7203ddea348e8bf27e048d13c0b 144 PANTHER PTHR33204:SF5 4 106 2.9E-49 T 22-04-2016 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 Pfam PF00512 His Kinase A (phospho-acceptor) domain 89 149 1.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 SMART SM00388 84 149 7.3E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 197 308 4.8E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 Gene3D G3DSA:1.10.287.130 75 144 4.9E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 SUPERFAMILY SSF52172 439 562 3.84E-32 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 Gene3D G3DSA:3.40.50.2300 437 559 4.7E-33 T 22-04-2016 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 Gene3D G3DSA:3.30.565.10 150 311 3.9E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 PANTHER PTHR24423 77 315 6.2E-113 T 22-04-2016 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 PANTHER PTHR24423 396 574 6.2E-113 T 22-04-2016 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 Pfam PF00072 Response regulator receiver domain 441 553 7.0E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 SMART SM00448 439 554 3.8E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 PANTHER PTHR24423:SF382 77 315 6.2E-113 T 22-04-2016 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 PANTHER PTHR24423:SF382 396 574 6.2E-113 T 22-04-2016 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 SMART SM00387 196 312 8.3E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 SUPERFAMILY SSF47384 72 150 5.49E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 255 265 6.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 272 290 6.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 237 251 6.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 PRINTS PR00344 Bacterial sensor protein C-terminal signature 296 309 6.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15760 635713ad6667dd6c5e139ab28571b0e9 693 SUPERFAMILY SSF55874 138 308 4.32E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09900 0900cc4ec96c31fb5266bb018b4e393e 558 Pfam PF01566 Natural resistance-associated macrophage protein 73 427 1.4E-81 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 446 69.293 T 22-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 PANTHER PTHR11587 1 425 6.5E-174 T 22-04-2016 JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 9.3E-160 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 Pfam PF00764 Arginosuccinate synthase 16 410 7.9E-62 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 Gene3D G3DSA:3.40.50.620 4 174 1.1E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 Gene3D G3DSA:1.10.287.400 377 440 9.8E-34 T 22-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 Gene3D G3DSA:3.90.1260.10 175 372 1.5E-65 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 SUPERFAMILY SSF52402 4 185 1.35E-32 T 22-04-2016 JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 PANTHER PTHR11587:SF2 1 425 6.5E-174 T 22-04-2016 JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 SUPERFAMILY SSF69864 190 443 6.67E-79 T 22-04-2016 JE55_RS09920 c448114d5719f1bfea089576f62e4161 446 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS03135 19bde55e4af7305a458f180a724de9f9 64 Gene3D G3DSA:3.40.30.10 1 62 9.4E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS03135 19bde55e4af7305a458f180a724de9f9 64 Pfam PF05768 Glutaredoxin-like domain (DUF836) 2 59 6.2E-8 T 22-04-2016 IPR008554 Glutaredoxin-like JE55_RS03135 19bde55e4af7305a458f180a724de9f9 64 SUPERFAMILY SSF52833 2 61 1.34E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 PANTHER PTHR30218:SF0 8 682 0.0 T 22-04-2016 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 Gene3D G3DSA:3.30.1840.10 109 302 7.3E-63 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 SUPERFAMILY SSF140356 7 108 5.23E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 681 6.7E-288 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 Pfam PF13090 Polyphosphate kinase C-terminal domain 332 678 3.2E-152 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 SUPERFAMILY SSF56024 317 498 4.4E-57 T 22-04-2016 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 PANTHER PTHR30218 8 682 0.0 T 22-04-2016 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 Pfam PF02503 Polyphosphate kinase middle domain 122 323 5.2E-55 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 Pfam PF13089 Polyphosphate kinase N-terminal domain 8 112 8.3E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 Gene3D G3DSA:3.30.870.10 317 505 2.9E-78 T 22-04-2016 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 SUPERFAMILY SSF56024 507 681 3.36E-68 T 22-04-2016 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 SUPERFAMILY SSF143724 110 315 1.79E-60 T 22-04-2016 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 PIRSF PIRSF015589 2 685 7.9E-259 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 686 31.494 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 JE55_RS15280 7741c1ea9fcaae427d6f8208b39a90ce 686 Gene3D G3DSA:3.30.870.10 506 682 2.2E-71 T 22-04-2016 JE55_RS02835 f3d26948e4ea22161f88c42e7cba1760 170 Gene3D G3DSA:3.30.450.40 14 156 1.6E-48 T 22-04-2016 IPR029016 GAF domain-like JE55_RS02835 f3d26948e4ea22161f88c42e7cba1760 170 SUPERFAMILY SSF55781 15 155 4.71E-39 T 22-04-2016 IPR029016 GAF domain-like JE55_RS02835 f3d26948e4ea22161f88c42e7cba1760 170 PANTHER PTHR21021 1 167 1.4E-52 T 22-04-2016 JE55_RS02835 f3d26948e4ea22161f88c42e7cba1760 170 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 99 116 - T 22-04-2016 IPR000614 Free Met sulfoxide reductase conserved site JE55_RS02835 f3d26948e4ea22161f88c42e7cba1760 170 Pfam PF13185 GAF domain 54 147 3.7E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 JE55_RS05110 570622b5b417417cb73f0118f60ce04a 226 Pfam PF09335 SNARE associated Golgi protein 49 177 2.8E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein JE55_RS05110 570622b5b417417cb73f0118f60ce04a 226 PANTHER PTHR30353 1 223 6.0E-72 T 22-04-2016 IPR032818 DedA family JE55_RS05110 570622b5b417417cb73f0118f60ce04a 226 PANTHER PTHR30353:SF0 1 223 6.0E-72 T 22-04-2016 JE55_RS26490 36de6e945dff3a391bb4ff5ace9981f4 109 SUPERFAMILY SSF55729 2 109 2.13E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS26490 36de6e945dff3a391bb4ff5ace9981f4 109 PANTHER PTHR13256 1 109 2.1E-41 T 22-04-2016 JE55_RS26490 36de6e945dff3a391bb4ff5ace9981f4 109 Gene3D G3DSA:3.40.630.30 2 109 1.8E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS26490 36de6e945dff3a391bb4ff5ace9981f4 109 Pfam PF13302 Acetyltransferase (GNAT) domain 3 109 1.1E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS26490 36de6e945dff3a391bb4ff5ace9981f4 109 PANTHER PTHR13256:SF21 1 109 2.1E-41 T 22-04-2016 JE55_RS02125 f897e47baa42ec8a85a30df4c66ade7f 248 SUPERFAMILY SSF75620 1 245 1.23E-116 T 22-04-2016 JE55_RS02125 f897e47baa42ec8a85a30df4c66ade7f 248 SMART SM00937 1 78 2.9E-29 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 JE55_RS02125 f897e47baa42ec8a85a30df4c66ade7f 248 Pfam PF00472 RF-1 domain 112 220 1.6E-40 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JE55_RS02125 f897e47baa42ec8a85a30df4c66ade7f 248 Pfam PF03462 PCRF domain 4 103 2.2E-41 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 JE55_RS02125 f897e47baa42ec8a85a30df4c66ade7f 248 Gene3D G3DSA:3.30.160.20 111 189 2.0E-38 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain JE55_RS02125 f897e47baa42ec8a85a30df4c66ade7f 248 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 246 3.8E-131 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 JE55_RS02125 f897e47baa42ec8a85a30df4c66ade7f 248 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 128 144 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JE55_RS02125 f897e47baa42ec8a85a30df4c66ade7f 248 PANTHER PTHR11075 1 246 5.4E-138 T 22-04-2016 JE55_RS02125 f897e47baa42ec8a85a30df4c66ade7f 248 PANTHER PTHR11075:SF6 1 246 5.4E-138 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 JE55_RS17875 c23746a9c210552d0b42c4e4cfddb91a 570 SUPERFAMILY SSF82549 10 331 1.02E-113 T 22-04-2016 JE55_RS17875 c23746a9c210552d0b42c4e4cfddb91a 570 Pfam PF02734 DAK2 domain 395 565 1.2E-41 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 JE55_RS17875 c23746a9c210552d0b42c4e4cfddb91a 570 SUPERFAMILY SSF101473 364 567 7.06E-47 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 JE55_RS17875 c23746a9c210552d0b42c4e4cfddb91a 570 Gene3D G3DSA:3.40.50.10440 11 183 7.2E-70 T 22-04-2016 JE55_RS17875 c23746a9c210552d0b42c4e4cfddb91a 570 Gene3D G3DSA:3.30.1180.20 187 332 5.9E-55 T 22-04-2016 JE55_RS17875 c23746a9c210552d0b42c4e4cfddb91a 570 SMART SM01120 394 567 1.7E-52 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 JE55_RS17875 c23746a9c210552d0b42c4e4cfddb91a 570 Pfam PF02733 Dak1 domain 17 328 6.2E-118 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 JE55_RS17875 c23746a9c210552d0b42c4e4cfddb91a 570 PANTHER PTHR28629 1 565 2.1E-228 T 22-04-2016 JE55_RS05745 c4935fc50a1176897f55b6e3c4a2859c 617 SUPERFAMILY SSF143975 4 421 1.24E-149 T 22-04-2016 JE55_RS05745 c4935fc50a1176897f55b6e3c4a2859c 617 Pfam PF00920 Dehydratase family 69 602 1.9E-164 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS05745 c4935fc50a1176897f55b6e3c4a2859c 617 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 5 605 3.0E-296 T 22-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 JE55_RS05745 c4935fc50a1176897f55b6e3c4a2859c 617 PANTHER PTHR21000:SF9 4 602 0.0 T 22-04-2016 JE55_RS05745 c4935fc50a1176897f55b6e3c4a2859c 617 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 157 167 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS05745 c4935fc50a1176897f55b6e3c4a2859c 617 PANTHER PTHR21000 4 602 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS05745 c4935fc50a1176897f55b6e3c4a2859c 617 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 508 519 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS05745 c4935fc50a1176897f55b6e3c4a2859c 617 SUPERFAMILY SSF52016 422 605 6.04E-54 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel JE55_RS14735 8464edabc914b50a9750fe32750a2aba 213 SUPERFAMILY SSF51735 7 208 1.3E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14735 8464edabc914b50a9750fe32750a2aba 213 Pfam PF13460 NAD(P)H-binding 12 199 3.0E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14735 8464edabc914b50a9750fe32750a2aba 213 Gene3D G3DSA:3.40.50.720 7 209 2.4E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14735 8464edabc914b50a9750fe32750a2aba 213 PANTHER PTHR15020:SF29 6 213 1.2E-61 T 22-04-2016 JE55_RS14735 8464edabc914b50a9750fe32750a2aba 213 PANTHER PTHR15020 6 213 1.2E-61 T 22-04-2016 JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 Gene3D G3DSA:3.40.50.920 716 897 2.0E-76 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 Gene3D G3DSA:3.40.50.970 66 474 5.8E-156 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 PIRSF PIRSF000156 6 898 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 SUPERFAMILY SSF52518 66 473 1.33E-137 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 121 303 6.2E-8 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 SUPERFAMILY SSF52922 712 897 4.71E-59 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 16 897 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 Gene3D G3DSA:3.40.50.970 478 711 2.3E-118 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 PANTHER PTHR11624:SF67 797 880 0.0 T 22-04-2016 JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 PANTHER PTHR11624:SF67 560 778 0.0 T 22-04-2016 JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 PANTHER PTHR11624:SF67 480 542 0.0 T 22-04-2016 JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 PANTHER PTHR11624:SF67 369 458 0.0 T 22-04-2016 JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 PANTHER PTHR11624:SF67 83 301 0.0 T 22-04-2016 JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 PANTHER PTHR11624 797 880 0.0 T 22-04-2016 IPR033247 Transketolase family JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 PANTHER PTHR11624 560 778 0.0 T 22-04-2016 IPR033247 Transketolase family JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 PANTHER PTHR11624 480 542 0.0 T 22-04-2016 IPR033247 Transketolase family JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 PANTHER PTHR11624 369 458 0.0 T 22-04-2016 IPR033247 Transketolase family JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 PANTHER PTHR11624 83 301 0.0 T 22-04-2016 IPR033247 Transketolase family JE55_RS02225 9939af2e972bf179462c24d9c29e441b 898 SUPERFAMILY SSF52518 479 707 1.77E-96 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 Gene3D G3DSA:3.30.590.10 108 458 3.6E-141 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 PANTHER PTHR20852 4 140 2.7E-257 T 22-04-2016 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 PANTHER PTHR20852 162 471 2.7E-257 T 22-04-2016 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 Gene3D G3DSA:3.10.20.70 5 107 5.7E-40 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 470 4.6E-201 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 SUPERFAMILY SSF55931 104 470 1.47E-138 T 22-04-2016 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 SUPERFAMILY SSF54368 4 101 2.75E-35 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 388 400 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 Pfam PF00120 Glutamine synthetase, catalytic domain 104 468 2.8E-138 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 9.7E-31 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 PANTHER PTHR20852:SF15 4 140 2.7E-257 T 22-04-2016 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 PANTHER PTHR20852:SF15 162 471 2.7E-257 T 22-04-2016 JE55_RS02315 c35ef4d1d75d89f0c5d8877aa6b8d91e 471 SMART SM01230 104 381 3.3E-149 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS11150 dbf93f47db186937e60ebfbac1e8a5a2 297 Pfam PF03668 P-loop ATPase protein family 1 284 1.7E-86 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 JE55_RS11150 dbf93f47db186937e60ebfbac1e8a5a2 297 PIRSF PIRSF005052 1 289 4.1E-106 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 JE55_RS11150 dbf93f47db186937e60ebfbac1e8a5a2 297 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 287 39.418 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 JE55_RS11150 dbf93f47db186937e60ebfbac1e8a5a2 297 SUPERFAMILY SSF52540 1 163 1.47E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11150 dbf93f47db186937e60ebfbac1e8a5a2 297 PANTHER PTHR30448 1 294 6.5E-113 T 22-04-2016 JE55_RS11150 dbf93f47db186937e60ebfbac1e8a5a2 297 Gene3D G3DSA:3.40.50.300 1 162 4.3E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11150 dbf93f47db186937e60ebfbac1e8a5a2 297 PANTHER PTHR30448:SF0 1 294 6.5E-113 T 22-04-2016 JE55_RS06395 1a4abd8f1464348c76469f75267b5790 258 SUPERFAMILY SSF52096 1 258 2.78E-90 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS06395 1a4abd8f1464348c76469f75267b5790 258 PANTHER PTHR11941 1 255 3.9E-123 T 22-04-2016 JE55_RS06395 1a4abd8f1464348c76469f75267b5790 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 7.2E-83 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 JE55_RS06395 1a4abd8f1464348c76469f75267b5790 258 Gene3D G3DSA:3.90.226.10 1 256 4.8E-99 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS06395 1a4abd8f1464348c76469f75267b5790 258 PANTHER PTHR11941:SF54 1 255 3.9E-123 T 22-04-2016 JE55_RS06395 1a4abd8f1464348c76469f75267b5790 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 SMART SM00422 3 72 7.9E-23 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 Gene3D G3DSA:1.10.1660.10 3 112 1.2E-29 T 22-04-2016 JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 357 609 4.8E-56 T 22-04-2016 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 Pfam PF13411 MerR HTH family regulatory protein 4 70 6.6E-15 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 SUPERFAMILY SSF53335 356 616 1.37E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 SUPERFAMILY SSF46955 3 109 1.47E-26 T 22-04-2016 IPR009061 Putative DNA-binding domain JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 Pfam PF04072 Leucine carboxyl methyltransferase 358 534 3.8E-45 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.1E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 1.1E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.1E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 PANTHER PTHR13600 318 547 4.4E-46 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 Gene3D G3DSA:3.40.50.150 409 565 2.0E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS15420 49e9cee6f2b95f8e9a3cd46153ee9af7 630 PANTHER PTHR13600:SF12 318 547 4.4E-46 T 22-04-2016 JE55_RS09210 1c065c8b5d5e14a85172c75398b761ce 434 SUPERFAMILY SSF102405 127 333 1.43E-41 T 22-04-2016 JE55_RS09210 1c065c8b5d5e14a85172c75398b761ce 434 PANTHER PTHR32039 105 412 3.5E-100 T 22-04-2016 JE55_RS09210 1c065c8b5d5e14a85172c75398b761ce 434 SUPERFAMILY SSF47781 38 107 4.82E-6 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 JE55_RS09210 1c065c8b5d5e14a85172c75398b761ce 434 Gene3D G3DSA:1.10.10.10 364 411 5.8E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09210 1c065c8b5d5e14a85172c75398b761ce 434 Gene3D G3DSA:1.10.150.20 55 100 3.5E-6 T 22-04-2016 JE55_RS09210 1c065c8b5d5e14a85172c75398b761ce 434 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 116 332 2.5E-73 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 JE55_RS09210 1c065c8b5d5e14a85172c75398b761ce 434 Gene3D G3DSA:3.40.50.450 159 329 5.8E-13 T 22-04-2016 JE55_RS09210 1c065c8b5d5e14a85172c75398b761ce 434 Pfam PF02481 DNA recombination-mediator protein A 120 324 1.0E-73 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 JE55_RS09210 1c065c8b5d5e14a85172c75398b761ce 434 PANTHER PTHR32039:SF8 105 412 3.5E-100 T 22-04-2016 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 PANTHER PTHR19375:SF176 19 575 1.3E-261 T 22-04-2016 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 Gene3D G3DSA:3.30.420.40 205 237 5.8E-29 T 22-04-2016 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 Gene3D G3DSA:3.30.420.40 319 361 5.8E-29 T 22-04-2016 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 Gene3D G3DSA:3.30.30.30 59 95 7.2E-8 T 22-04-2016 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 SUPERFAMILY SSF100934 510 621 5.69E-36 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 Gene3D G3DSA:3.30.420.40 10 46 5.1E-52 T 22-04-2016 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 Gene3D G3DSA:3.30.420.40 97 204 5.1E-52 T 22-04-2016 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 621 2.3E-282 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 Gene3D G3DSA:2.60.34.10 393 534 3.7E-50 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 PRINTS PR00301 70kDa heat shock protein signature 391 410 1.2E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 PRINTS PR00301 70kDa heat shock protein signature 334 350 1.2E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 PRINTS PR00301 70kDa heat shock protein signature 151 171 1.2E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.2E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 PRINTS PR00301 70kDa heat shock protein signature 365 385 1.2E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 PRINTS PR00301 70kDa heat shock protein signature 472 488 1.2E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.2E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 PRINTS PR00301 70kDa heat shock protein signature 210 220 1.2E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 PRINTS PR00301 70kDa heat shock protein signature 71 79 1.2E-55 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 SUPERFAMILY SSF53067 200 382 7.5E-51 T 22-04-2016 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 Gene3D G3DSA:1.20.1270.10 535 621 2.7E-31 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 SUPERFAMILY SSF53067 19 195 2.09E-53 T 22-04-2016 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 Pfam PF00012 Hsp70 protein 21 605 1.8E-177 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 PANTHER PTHR19375 19 575 1.3E-261 T 22-04-2016 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 622 43.511 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 Gene3D G3DSA:3.90.640.10 238 315 3.6E-9 T 22-04-2016 JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 SUPERFAMILY SSF100920 389 542 1.23E-49 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain JE55_RS02150 6599584aee1c86e55da852db2d9eb9b5 622 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 204 217 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site JE55_RS06620 1add117da75dcebfb46b506ad2404110 198 PANTHER PTHR30108:SF10 8 193 2.6E-79 T 22-04-2016 JE55_RS06620 1add117da75dcebfb46b506ad2404110 198 SUPERFAMILY SSF52507 9 193 3.79E-61 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 JE55_RS06620 1add117da75dcebfb46b506ad2404110 198 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 10 190 3.0E-70 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 JE55_RS06620 1add117da75dcebfb46b506ad2404110 198 Pfam PF02441 Flavoprotein 10 134 4.3E-27 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 JE55_RS06620 1add117da75dcebfb46b506ad2404110 198 PANTHER PTHR30108 8 193 2.6E-79 T 22-04-2016 JE55_RS06620 1add117da75dcebfb46b506ad2404110 198 Gene3D G3DSA:3.40.50.1950 9 193 2.3E-76 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 JE55_RS06620 1add117da75dcebfb46b506ad2404110 198 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 9 193 37.194 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 Gene3D G3DSA:3.90.480.10 28 97 1.6E-32 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 Gene3D G3DSA:3.90.480.10 294 373 1.6E-32 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 113 271 1.4E-10 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 SUPERFAMILY SSF55124 9 94 5.72E-18 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 303 367 6.3E-16 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 33 81 4.4E-12 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 SUPERFAMILY SSF56014 113 276 1.83E-21 T 22-04-2016 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 TIGRFAM TIGR02435 CobG: precorrin-3B synthase 16 438 1.6E-100 T 22-04-2016 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 SUPERFAMILY SSF55124 224 371 7.52E-24 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 Gene3D G3DSA:3.30.413.10 380 468 4.4E-8 T 22-04-2016 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 Gene3D G3DSA:3.30.413.10 113 267 1.8E-10 T 22-04-2016 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 SUPERFAMILY SSF56014 379 470 9.16E-13 T 22-04-2016 JE55_RS17195 ad193727aa99cedf05ede7efbf47102f 482 PANTHER PTHR11493 19 471 2.8E-54 T 22-04-2016 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 SUPERFAMILY SSF55604 505 572 9.94E-10 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 Gene3D G3DSA:3.30.1360.60 504 573 7.7E-13 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 Gene3D G3DSA:3.30.1360.60 396 471 1.7E-23 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 Pfam PF00367 phosphotransferase system, EIIB 399 430 9.6E-11 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 Pfam PF00367 phosphotransferase system, EIIB 506 538 3.5E-8 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 PANTHER PTHR30009 6 481 3.3E-203 T 22-04-2016 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 359 456 2.1E-15 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 409 426 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 PANTHER PTHR30009:SF4 6 481 3.3E-203 T 22-04-2016 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 SUPERFAMILY SSF55604 397 470 1.31E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 Pfam PF02378 Phosphotransferase system, EIIC 14 302 7.4E-75 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 JE55_RS10980 f0a0c2cbeed7ad013b6e2e3a5aecc297 586 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 9 467 1.6E-179 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 JE55_RS06980 f4ac9ea6618e4538edd2e33005b29002 251 Pfam PF00977 Histidine biosynthesis protein 3 232 2.8E-80 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 JE55_RS06980 f4ac9ea6618e4538edd2e33005b29002 251 PANTHER PTHR21235 1 250 3.2E-98 T 22-04-2016 JE55_RS06980 f4ac9ea6618e4538edd2e33005b29002 251 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 2.0E-78 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 JE55_RS06980 f4ac9ea6618e4538edd2e33005b29002 251 PANTHER PTHR21235:SF15 1 250 3.2E-98 T 22-04-2016 JE55_RS06980 f4ac9ea6618e4538edd2e33005b29002 251 Gene3D G3DSA:3.20.20.70 1 239 3.9E-89 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS06980 f4ac9ea6618e4538edd2e33005b29002 251 SUPERFAMILY SSF51366 1 238 3.38E-75 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 JE55_RS06980 f4ac9ea6618e4538edd2e33005b29002 251 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 240 36.652 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 JE55_RS02800 81682432058bea69034cfbba69ed5141 250 PANTHER PTHR10788:SF42 14 247 7.5E-56 T 22-04-2016 JE55_RS02800 81682432058bea69034cfbba69ed5141 250 PANTHER PTHR10788 14 247 7.5E-56 T 22-04-2016 JE55_RS02800 81682432058bea69034cfbba69ed5141 250 Gene3D G3DSA:3.40.50.1000 13 88 6.0E-43 T 22-04-2016 IPR023214 HAD-like domain JE55_RS02800 81682432058bea69034cfbba69ed5141 250 Gene3D G3DSA:3.40.50.1000 164 244 6.0E-43 T 22-04-2016 IPR023214 HAD-like domain JE55_RS02800 81682432058bea69034cfbba69ed5141 250 SUPERFAMILY SSF56784 14 243 1.63E-43 T 22-04-2016 IPR023214 HAD-like domain JE55_RS02800 81682432058bea69034cfbba69ed5141 250 Pfam PF02358 Trehalose-phosphatase 16 223 8.8E-45 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 JE55_RS02800 81682432058bea69034cfbba69ed5141 250 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 12 235 3.0E-45 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 JE55_RS02800 81682432058bea69034cfbba69ed5141 250 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 15 211 2.7E-20 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 JE55_RS06760 4bd22ed2df38bdc797715fa3550d1556 612 PANTHER PTHR35370 2 612 4.5E-129 T 22-04-2016 JE55_RS06760 4bd22ed2df38bdc797715fa3550d1556 612 PANTHER PTHR35370:SF1 2 612 4.5E-129 T 22-04-2016 JE55_RS06760 4bd22ed2df38bdc797715fa3550d1556 612 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 611 1.5E-212 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like JE55_RS06760 4bd22ed2df38bdc797715fa3550d1556 612 PIRSF PIRSF028304 1 611 4.5E-192 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like JE55_RS06760 4bd22ed2df38bdc797715fa3550d1556 612 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 5 609 1.3E-208 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like JE55_RS00415 c5933b16610f06be910225369b57041a 460 Gene3D G3DSA:3.40.50.300 189 452 1.9E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00415 c5933b16610f06be910225369b57041a 460 Pfam PF00772 DnaB-like helicase N terminal domain 15 116 3.3E-35 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 JE55_RS00415 c5933b16610f06be910225369b57041a 460 SMART SM00382 212 410 1.1E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS00415 c5933b16610f06be910225369b57041a 460 SUPERFAMILY SSF52540 193 443 2.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00415 c5933b16610f06be910225369b57041a 460 Pfam PF03796 DnaB-like helicase C terminal domain 195 450 3.3E-117 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 JE55_RS00415 c5933b16610f06be910225369b57041a 460 Gene3D G3DSA:1.10.860.10 15 117 1.6E-37 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JE55_RS00415 c5933b16610f06be910225369b57041a 460 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 15 451 2.4E-174 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 JE55_RS00415 c5933b16610f06be910225369b57041a 460 SUPERFAMILY SSF48024 13 124 2.22E-37 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 JE55_RS00415 c5933b16610f06be910225369b57041a 460 PANTHER PTHR30153 1 460 8.2E-209 T 22-04-2016 JE55_RS00090 788cf6d2c388d01a5fe1b12ff3d9d60d 630 PANTHER PTHR30540:SF36 17 630 1.1E-228 T 22-04-2016 JE55_RS00090 788cf6d2c388d01a5fe1b12ff3d9d60d 630 Pfam PF02705 K+ potassium transporter 19 551 3.1E-207 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 JE55_RS00090 788cf6d2c388d01a5fe1b12ff3d9d60d 630 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 10 630 34.206 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup JE55_RS00090 788cf6d2c388d01a5fe1b12ff3d9d60d 630 PANTHER PTHR30540 17 630 1.1E-228 T 22-04-2016 JE55_RS01340 2cfb56b96a56f460279f22205c991574 253 Gene3D G3DSA:3.30.420.40 6 148 2.5E-36 T 22-04-2016 JE55_RS01340 2cfb56b96a56f460279f22205c991574 253 Pfam PF00814 Glycoprotease family 47 153 2.9E-24 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 JE55_RS01340 2cfb56b96a56f460279f22205c991574 253 SUPERFAMILY SSF53067 6 116 1.77E-23 T 22-04-2016 JE55_RS01340 2cfb56b96a56f460279f22205c991574 253 SUPERFAMILY SSF53067 125 231 7.77E-20 T 22-04-2016 JE55_RS01340 2cfb56b96a56f460279f22205c991574 253 PANTHER PTHR11735:SF11 1 148 1.3E-35 T 22-04-2016 JE55_RS01340 2cfb56b96a56f460279f22205c991574 253 PANTHER PTHR11735 1 148 1.3E-35 T 22-04-2016 JE55_RS01340 2cfb56b96a56f460279f22205c991574 253 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 6 233 6.4E-54 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 JE55_RS10015 f75b5bc91bc414be8b557cb11f39d4cd 134 SUPERFAMILY SSF55620 14 127 8.89E-27 T 22-04-2016 JE55_RS10015 f75b5bc91bc414be8b557cb11f39d4cd 134 Gene3D G3DSA:3.30.1130.10 15 127 1.4E-31 T 22-04-2016 JE55_RS10015 f75b5bc91bc414be8b557cb11f39d4cd 134 SMART SM00905 16 127 1.8E-26 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 JE55_RS10015 f75b5bc91bc414be8b557cb11f39d4cd 134 Pfam PF02152 Dihydroneopterin aldolase 17 125 2.3E-24 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 JE55_RS10015 f75b5bc91bc414be8b557cb11f39d4cd 134 TIGRFAM TIGR00526 folB_dom: FolB domain 15 128 3.9E-13 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 JE55_RS16070 ba96d67c4dfa65fea4355bf90fa68f70 106 PANTHER PTHR34205 4 106 2.4E-47 T 22-04-2016 JE55_RS16070 ba96d67c4dfa65fea4355bf90fa68f70 106 Pfam PF06127 Protein of unknown function (DUF962) 10 104 2.9E-35 T 22-04-2016 IPR009305 Protein of unknown function DUF962 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 PANTHER PTHR24078 1 349 4.1E-157 T 22-04-2016 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 Pfam PF00684 DnaJ central domain 149 209 5.8E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 SUPERFAMILY SSF49493 260 346 7.06E-24 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 SMART SM00271 4 62 3.2E-30 T 22-04-2016 IPR001623 DnaJ domain JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 374 42.115 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 PANTHER PTHR24078:SF190 1 349 4.1E-157 T 22-04-2016 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 Gene3D G3DSA:1.10.287.110 1 101 6.3E-38 T 22-04-2016 IPR001623 DnaJ domain JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 SUPERFAMILY SSF46565 1 108 9.16E-37 T 22-04-2016 IPR001623 DnaJ domain JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 Gene3D G3DSA:2.60.260.20 213 256 2.0E-20 T 22-04-2016 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 Gene3D G3DSA:2.60.260.20 116 143 2.0E-20 T 22-04-2016 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 PRINTS PR00625 DnaJ domain signature 62 81 1.8E-32 T 22-04-2016 IPR001623 DnaJ domain JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 PRINTS PR00625 DnaJ domain signature 42 62 1.8E-32 T 22-04-2016 IPR001623 DnaJ domain JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 PRINTS PR00625 DnaJ domain signature 25 40 1.8E-32 T 22-04-2016 IPR001623 DnaJ domain JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 PRINTS PR00625 DnaJ domain signature 7 25 1.8E-32 T 22-04-2016 IPR001623 DnaJ domain JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 Gene3D G3DSA:2.60.260.20 258 335 3.3E-24 T 22-04-2016 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 SUPERFAMILY SSF57938 136 213 2.75E-22 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 Pfam PF00226 DnaJ domain 5 67 4.6E-28 T 22-04-2016 IPR001623 DnaJ domain JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 Pfam PF01556 DnaJ C terminal domain 123 335 1.4E-43 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 Gene3D G3DSA:2.10.230.10 144 212 3.2E-24 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 SUPERFAMILY SSF49493 117 171 4.58E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 SUPERFAMILY SSF49493 215 261 4.58E-19 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 JE55_RS05170 cdc625d59cf79e22cc44d8274b2b7fd0 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 1.2E-138 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 JE55_RS03225 12f343f3d06861074d3a7173044c0189 219 Gene3D G3DSA:3.40.50.1000 76 217 2.1E-42 T 22-04-2016 IPR023214 HAD-like domain JE55_RS03225 12f343f3d06861074d3a7173044c0189 219 SUPERFAMILY SSF56784 6 216 5.97E-58 T 22-04-2016 IPR023214 HAD-like domain JE55_RS03225 12f343f3d06861074d3a7173044c0189 219 Gene3D G3DSA:1.10.150.240 24 75 5.0E-8 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 JE55_RS03225 12f343f3d06861074d3a7173044c0189 219 PANTHER PTHR18901 1 215 6.8E-52 T 22-04-2016 JE55_RS03225 12f343f3d06861074d3a7173044c0189 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 180 3.3E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS03225 12f343f3d06861074d3a7173044c0189 219 PANTHER PTHR18901:SF40 1 215 6.8E-52 T 22-04-2016 JE55_RS03225 12f343f3d06861074d3a7173044c0189 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 84 186 5.7E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS03225 12f343f3d06861074d3a7173044c0189 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 184 6.9E-33 T 22-04-2016 IPR023214 HAD-like domain JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 SUPERFAMILY SSF56037 363 485 2.62E-23 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 30 213 2.0E-47 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 SMART SM00977 408 482 2.7E-16 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 Pfam PF09179 TilS substrate binding domain 259 324 6.6E-13 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 Gene3D G3DSA:3.40.50.620 27 189 6.7E-14 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 Pfam PF01171 PP-loop family 30 208 1.1E-51 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 17 318 22.918 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 Pfam PF11734 TilS substrate C-terminal domain 409 482 1.2E-20 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 PANTHER PTHR11807 19 458 5.0E-57 T 22-04-2016 JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 SUPERFAMILY SSF52402 23 243 7.59E-56 T 22-04-2016 JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 413 450 2.8E-7 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JE55_RS01665 9063e0942a99e5aa1f6bfe43392fda25 489 SUPERFAMILY SSF82829 257 329 1.07E-15 T 22-04-2016 JE55_RS04310 c99f38411af60ac484dea6cff69bac24 216 Hamap MF_01389 Urease accessory protein UreG [ureG]. 17 215 45.979 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 JE55_RS04310 c99f38411af60ac484dea6cff69bac24 216 SUPERFAMILY SSF52540 17 210 8.2E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04310 c99f38411af60ac484dea6cff69bac24 216 PANTHER PTHR31715 18 216 8.8E-120 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 JE55_RS04310 c99f38411af60ac484dea6cff69bac24 216 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 19 214 2.9E-98 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 JE55_RS04310 c99f38411af60ac484dea6cff69bac24 216 PIRSF PIRSF005624 3 214 3.5E-45 T 22-04-2016 JE55_RS04310 c99f38411af60ac484dea6cff69bac24 216 Gene3D G3DSA:3.40.50.300 18 185 1.4E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04310 c99f38411af60ac484dea6cff69bac24 216 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 21 190 1.0E-36 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JE55_RS12865 3e48add471b6d76c7d9959dc69e72837 166 PANTHER PTHR33695 16 166 8.8E-53 T 22-04-2016 JE55_RS12865 3e48add471b6d76c7d9959dc69e72837 166 TIGRFAM TIGR00077 lspA: signal peptidase II 19 160 2.2E-42 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 JE55_RS12865 3e48add471b6d76c7d9959dc69e72837 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 104 119 4.0E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 JE55_RS12865 3e48add471b6d76c7d9959dc69e72837 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 140 156 4.0E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 JE55_RS12865 3e48add471b6d76c7d9959dc69e72837 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 57 65 4.0E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 JE55_RS12865 3e48add471b6d76c7d9959dc69e72837 166 ProSitePatterns PS00855 Signal peptidases II signature. 107 119 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 JE55_RS12865 3e48add471b6d76c7d9959dc69e72837 166 PANTHER PTHR33695:SF1 16 166 8.8E-53 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 JE55_RS12865 3e48add471b6d76c7d9959dc69e72837 166 Pfam PF01252 Signal peptidase (SPase) II 20 158 1.0E-40 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 JE55_RS12865 3e48add471b6d76c7d9959dc69e72837 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 11 165 17.066 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 JE55_RS08395 917f40ac8a5aa061ff57c91d6e17bf82 261 PANTHER PTHR18966 30 260 2.7E-98 T 22-04-2016 JE55_RS08395 917f40ac8a5aa061ff57c91d6e17bf82 261 SMART SM00062 40 261 2.1E-39 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS08395 917f40ac8a5aa061ff57c91d6e17bf82 261 Gene3D G3DSA:3.40.190.10 222 260 7.8E-30 T 22-04-2016 JE55_RS08395 917f40ac8a5aa061ff57c91d6e17bf82 261 Gene3D G3DSA:3.40.190.10 38 116 7.8E-30 T 22-04-2016 JE55_RS08395 917f40ac8a5aa061ff57c91d6e17bf82 261 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 JE55_RS08395 917f40ac8a5aa061ff57c91d6e17bf82 261 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 260 3.9E-44 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS08395 917f40ac8a5aa061ff57c91d6e17bf82 261 SUPERFAMILY SSF53850 1 260 2.9E-51 T 22-04-2016 JE55_RS08395 917f40ac8a5aa061ff57c91d6e17bf82 261 PANTHER PTHR18966:SF243 30 260 2.7E-98 T 22-04-2016 JE55_RS08395 917f40ac8a5aa061ff57c91d6e17bf82 261 Gene3D G3DSA:3.40.190.10 117 202 1.1E-8 T 22-04-2016 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 Hamap MF_00318 Enolase [eno]. 2 411 44.519 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 425 1.5E-207 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 Gene3D G3DSA:3.30.390.10 4 126 2.8E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 SUPERFAMILY SSF54826 4 136 5.3E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 424 6.7E-131 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 ProSitePatterns PS00164 Enolase signature. 334 347 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 PRINTS PR00148 Enolase signature 334 348 4.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 PRINTS PR00148 Enolase signature 37 51 4.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 PRINTS PR00148 Enolase signature 161 174 4.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 PRINTS PR00148 Enolase signature 107 123 4.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 PRINTS PR00148 Enolase signature 311 322 4.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 PRINTS PR00148 Enolase signature 363 380 4.0E-43 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 PIRSF PIRSF001400 1 425 4.4E-188 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 Pfam PF03952 Enolase, N-terminal domain 4 133 2.1E-58 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 SMART SM01193 4 134 1.1E-93 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 SMART SM01192 139 425 1.1E-220 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 JE55_RS02075 f163b669faf88d39022aac0637afff79 427 SUPERFAMILY SSF51604 139 426 1.7E-127 T 22-04-2016 IPR029065 Enolase C-terminal domain-like JE55_RS02075 f163b669faf88d39022aac0637afff79 427 Gene3D G3DSA:3.20.20.120 128 424 6.1E-132 T 22-04-2016 IPR029065 Enolase C-terminal domain-like JE55_RS02075 f163b669faf88d39022aac0637afff79 427 PANTHER PTHR11902 1 427 3.9E-254 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS08650 63f565bc230ec25a92e48aed1d3a24c5 405 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 5.3E-27 T 22-04-2016 IPR018076 Type II secretion system F domain JE55_RS08650 63f565bc230ec25a92e48aed1d3a24c5 405 Pfam PF00482 Type II secretion system (T2SS), protein F 72 194 1.0E-31 T 22-04-2016 IPR018076 Type II secretion system F domain JE55_RS08650 63f565bc230ec25a92e48aed1d3a24c5 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 404 1.6E-176 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 JE55_RS08650 63f565bc230ec25a92e48aed1d3a24c5 405 PANTHER PTHR30012 2 405 1.4E-165 T 22-04-2016 JE55_RS08650 63f565bc230ec25a92e48aed1d3a24c5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.7E-29 T 22-04-2016 IPR003004 GspF/PilC family JE55_RS08650 63f565bc230ec25a92e48aed1d3a24c5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.7E-29 T 22-04-2016 IPR003004 GspF/PilC family JE55_RS08650 63f565bc230ec25a92e48aed1d3a24c5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.7E-29 T 22-04-2016 IPR003004 GspF/PilC family JE55_RS08650 63f565bc230ec25a92e48aed1d3a24c5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.7E-29 T 22-04-2016 IPR003004 GspF/PilC family JE55_RS08650 63f565bc230ec25a92e48aed1d3a24c5 405 PANTHER PTHR30012:SF5 2 405 1.4E-165 T 22-04-2016 JE55_RS12155 882de039b471eac3937e71f580e8213e 518 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 348 3.3E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12155 882de039b471eac3937e71f580e8213e 518 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 400 509 5.4E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12155 882de039b471eac3937e71f580e8213e 518 SUPERFAMILY SSF47384 267 348 2.55E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12155 882de039b471eac3937e71f580e8213e 518 Pfam PF00672 HAMP domain 217 280 2.8E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS12155 882de039b471eac3937e71f580e8213e 518 Gene3D G3DSA:1.10.287.130 276 334 7.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12155 882de039b471eac3937e71f580e8213e 518 SMART SM00387 397 514 1.0E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12155 882de039b471eac3937e71f580e8213e 518 PANTHER PTHR24423:SF474 22 40 9.3E-65 T 22-04-2016 JE55_RS12155 882de039b471eac3937e71f580e8213e 518 PANTHER PTHR24423:SF474 225 493 9.3E-65 T 22-04-2016 JE55_RS12155 882de039b471eac3937e71f580e8213e 518 PANTHER PTHR24423 22 40 9.3E-65 T 22-04-2016 JE55_RS12155 882de039b471eac3937e71f580e8213e 518 PANTHER PTHR24423 225 493 9.3E-65 T 22-04-2016 JE55_RS12155 882de039b471eac3937e71f580e8213e 518 Pfam PF08521 Two-component sensor kinase N-terminal 62 207 3.5E-42 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal JE55_RS12155 882de039b471eac3937e71f580e8213e 518 SUPERFAMILY SSF55874 339 496 7.86E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12155 882de039b471eac3937e71f580e8213e 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 3.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS12155 882de039b471eac3937e71f580e8213e 518 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 450 3.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS12155 882de039b471eac3937e71f580e8213e 518 Gene3D G3DSA:3.30.565.10 335 496 1.9E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12155 882de039b471eac3937e71f580e8213e 518 SMART SM00388 284 349 1.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS13175 259efda57f4ec6efacfcfc1259cb1ba6 333 Gene3D G3DSA:1.10.3470.10 3 331 3.3E-95 T 22-04-2016 IPR029022 ABC transporter, BtuC-like JE55_RS13175 259efda57f4ec6efacfcfc1259cb1ba6 333 SUPERFAMILY SSF81345 5 329 5.49E-70 T 22-04-2016 IPR029022 ABC transporter, BtuC-like JE55_RS13175 259efda57f4ec6efacfcfc1259cb1ba6 333 Pfam PF01032 FecCD transport family 19 329 5.3E-79 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 JE55_RS13175 259efda57f4ec6efacfcfc1259cb1ba6 333 PANTHER PTHR30472 1 333 4.9E-81 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 JE55_RS00365 4f8daa86e3bcbf96fb7aba1b57b31a26 383 PIRSF PIRSF000390 5 381 7.6E-108 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JE55_RS00365 4f8daa86e3bcbf96fb7aba1b57b31a26 383 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 374 1.1E-113 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JE55_RS00365 4f8daa86e3bcbf96fb7aba1b57b31a26 383 Gene3D G3DSA:3.90.1150.10 250 380 3.3E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS00365 4f8daa86e3bcbf96fb7aba1b57b31a26 383 PANTHER PTHR30244 1 381 1.5E-131 T 22-04-2016 JE55_RS00365 4f8daa86e3bcbf96fb7aba1b57b31a26 383 PANTHER PTHR30244:SF3 1 381 1.5E-131 T 22-04-2016 JE55_RS00365 4f8daa86e3bcbf96fb7aba1b57b31a26 383 SUPERFAMILY SSF53383 8 379 5.42E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS00365 4f8daa86e3bcbf96fb7aba1b57b31a26 383 Gene3D G3DSA:3.40.640.10 9 248 2.8E-80 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS11315 2ead90c0df716750103cd4c417716b00 363 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 232 244 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 JE55_RS11315 2ead90c0df716750103cd4c417716b00 363 Gene3D G3DSA:1.10.600.10 26 351 3.4E-67 T 22-04-2016 IPR008949 Isoprenoid synthase domain JE55_RS11315 2ead90c0df716750103cd4c417716b00 363 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 104 118 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 JE55_RS11315 2ead90c0df716750103cd4c417716b00 363 Pfam PF00348 Polyprenyl synthetase 52 286 2.9E-50 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 JE55_RS11315 2ead90c0df716750103cd4c417716b00 363 SUPERFAMILY SSF48576 24 352 8.64E-64 T 22-04-2016 IPR008949 Isoprenoid synthase domain JE55_RS11315 2ead90c0df716750103cd4c417716b00 363 PANTHER PTHR12001 53 353 1.8E-64 T 22-04-2016 IPR017446 Polyprenyl synthetase-related JE55_RS11315 2ead90c0df716750103cd4c417716b00 363 PANTHER PTHR12001:SF47 53 353 1.8E-64 T 22-04-2016 JE55_RS29925 c18f5f123766557112b9f03ba024177e 69 PANTHER PTHR24220:SF568 11 69 9.6E-25 T 22-04-2016 JE55_RS29925 c18f5f123766557112b9f03ba024177e 69 Pfam PF00005 ABC transporter 26 69 8.8E-11 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS29925 c18f5f123766557112b9f03ba024177e 69 SUPERFAMILY SSF52540 7 69 3.17E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS29925 c18f5f123766557112b9f03ba024177e 69 PANTHER PTHR24220 11 69 9.6E-25 T 22-04-2016 JE55_RS29925 c18f5f123766557112b9f03ba024177e 69 Gene3D G3DSA:3.40.50.300 6 69 2.2E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 SUPERFAMILY SSF46785 2 82 2.63E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 PANTHER PTHR30346 1 290 7.2E-85 T 22-04-2016 JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 PANTHER PTHR30346:SF6 1 290 7.2E-85 T 22-04-2016 JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 Pfam PF03466 LysR substrate binding domain 91 296 2.5E-39 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 Gene3D G3DSA:1.10.10.10 3 82 6.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 SUPERFAMILY SSF53850 91 299 1.19E-33 T 22-04-2016 JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 Gene3D G3DSA:3.40.190.10 89 179 5.2E-18 T 22-04-2016 JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 Gene3D G3DSA:3.40.190.10 180 270 4.5E-30 T 22-04-2016 JE55_RS10955 3595d1b6ba7f073fd34f74b6cc9b98ed 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.1E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS28700 918cf687ba568cf1a96adbb0aaa6a321 264 Gene3D G3DSA:1.10.10.10 23 95 1.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS28700 918cf687ba568cf1a96adbb0aaa6a321 264 PANTHER PTHR30514:SF1 23 264 5.2E-42 T 22-04-2016 JE55_RS28700 918cf687ba568cf1a96adbb0aaa6a321 264 Pfam PF01380 SIS domain 146 250 1.7E-12 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS28700 918cf687ba568cf1a96adbb0aaa6a321 264 SUPERFAMILY SSF53697 117 258 1.26E-26 T 22-04-2016 JE55_RS28700 918cf687ba568cf1a96adbb0aaa6a321 264 Gene3D G3DSA:3.40.50.10490 118 254 4.4E-20 T 22-04-2016 JE55_RS28700 918cf687ba568cf1a96adbb0aaa6a321 264 PANTHER PTHR30514 23 264 5.2E-42 T 22-04-2016 JE55_RS28700 918cf687ba568cf1a96adbb0aaa6a321 264 Pfam PF01418 Helix-turn-helix domain, rpiR family 26 96 3.9E-13 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 JE55_RS28700 918cf687ba568cf1a96adbb0aaa6a321 264 SUPERFAMILY SSF46689 22 94 5.38E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS14645 c098b901de1ec9b62addcb069ee3fb65 238 PIRSF PIRSF000005 1 215 2.9E-61 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 JE55_RS14645 c098b901de1ec9b62addcb069ee3fb65 238 Pfam PF00034 Cytochrome c 144 213 3.2E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14645 c098b901de1ec9b62addcb069ee3fb65 238 Pfam PF00034 Cytochrome c 42 83 2.3E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14645 c098b901de1ec9b62addcb069ee3fb65 238 PANTHER PTHR33751 37 220 1.6E-74 T 22-04-2016 JE55_RS14645 c098b901de1ec9b62addcb069ee3fb65 238 SUPERFAMILY SSF46626 111 222 1.89E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14645 c098b901de1ec9b62addcb069ee3fb65 238 SUPERFAMILY SSF46626 42 112 1.25E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14645 c098b901de1ec9b62addcb069ee3fb65 238 PANTHER PTHR33751:SF2 37 220 1.6E-74 T 22-04-2016 JE55_RS14645 c098b901de1ec9b62addcb069ee3fb65 238 Gene3D G3DSA:1.10.760.10 35 108 3.8E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14645 c098b901de1ec9b62addcb069ee3fb65 238 Gene3D G3DSA:1.10.760.10 133 213 2.5E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 Pfam PF03958 Bacterial type II/III secretion system short domain 268 406 2.7E-18 T 22-04-2016 IPR005644 NolW-like JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 Pfam PF03958 Bacterial type II/III secretion system short domain 129 187 1.4E-11 T 22-04-2016 IPR005644 NolW-like JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 Pfam PF03958 Bacterial type II/III secretion system short domain 192 262 7.3E-14 T 22-04-2016 IPR005644 NolW-like JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 Pfam PF00263 Bacterial type II and III secretion system protein 501 666 4.5E-51 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 PANTHER PTHR30332:SF8 20 744 4.4E-155 T 22-04-2016 JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 PANTHER PTHR30332 20 744 4.4E-155 T 22-04-2016 JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 32 676 1.5E-218 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 PRINTS PR00811 Bacterial general secretion pathway protein D signature 631 649 5.1E-29 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 PRINTS PR00811 Bacterial general secretion pathway protein D signature 654 668 5.1E-29 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 PRINTS PR00811 Bacterial general secretion pathway protein D signature 406 416 5.1E-29 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 PRINTS PR00811 Bacterial general secretion pathway protein D signature 493 517 5.1E-29 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS08640 fa3bfdb74f2dfdaf2c669b96cfe01b1c 757 PRINTS PR00811 Bacterial general secretion pathway protein D signature 528 538 5.1E-29 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS17300 f16429433903126b113dc2dbed40a199 312 PANTHER PTHR24220 259 305 5.2E-121 T 22-04-2016 JE55_RS17300 f16429433903126b113dc2dbed40a199 312 PANTHER PTHR24220 3 242 5.2E-121 T 22-04-2016 JE55_RS17300 f16429433903126b113dc2dbed40a199 312 Gene3D G3DSA:3.40.50.300 1 230 1.3E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17300 f16429433903126b113dc2dbed40a199 312 SMART SM00382 26 213 4.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS17300 f16429433903126b113dc2dbed40a199 312 PANTHER PTHR24220:SF434 259 305 5.2E-121 T 22-04-2016 JE55_RS17300 f16429433903126b113dc2dbed40a199 312 PANTHER PTHR24220:SF434 3 242 5.2E-121 T 22-04-2016 JE55_RS17300 f16429433903126b113dc2dbed40a199 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS17300 f16429433903126b113dc2dbed40a199 312 Pfam PF00005 ABC transporter 18 163 4.2E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS17300 f16429433903126b113dc2dbed40a199 312 SUPERFAMILY SSF52540 1 237 7.53E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10255 7257cd48abe553e3989c414d8939d19b 429 SUPERFAMILY SSF103190 312 420 4.79E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like JE55_RS10255 7257cd48abe553e3989c414d8939d19b 429 SMART SM00052 13 262 1.0E-18 T 22-04-2016 IPR001633 EAL domain JE55_RS10255 7257cd48abe553e3989c414d8939d19b 429 PANTHER PTHR33121 41 296 3.3E-35 T 22-04-2016 JE55_RS10255 7257cd48abe553e3989c414d8939d19b 429 Gene3D G3DSA:3.20.20.450 34 250 5.4E-48 T 22-04-2016 IPR001633 EAL domain JE55_RS10255 7257cd48abe553e3989c414d8939d19b 429 Gene3D G3DSA:3.30.450.20 325 420 4.9E-11 T 22-04-2016 JE55_RS10255 7257cd48abe553e3989c414d8939d19b 429 SUPERFAMILY SSF141868 37 259 1.83E-54 T 22-04-2016 IPR001633 EAL domain JE55_RS10255 7257cd48abe553e3989c414d8939d19b 429 Pfam PF00563 EAL domain 36 257 1.8E-46 T 22-04-2016 IPR001633 EAL domain JE55_RS10255 7257cd48abe553e3989c414d8939d19b 429 PANTHER PTHR33121:SF10 41 296 3.3E-35 T 22-04-2016 JE55_RS16605 f749e6d582c521d530a342db6476b97c 276 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 250 46.485 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic JE55_RS16605 f749e6d582c521d530a342db6476b97c 276 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 113 240 9.2E-39 T 22-04-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 JE55_RS16605 f749e6d582c521d530a342db6476b97c 276 SUPERFAMILY SSF55729 86 248 1.13E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS16605 f749e6d582c521d530a342db6476b97c 276 PIRSF PIRSF037208 8 256 2.0E-91 T 22-04-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic JE55_RS16605 f749e6d582c521d530a342db6476b97c 276 PANTHER PTHR21367:SF0 23 250 5.2E-62 T 22-04-2016 JE55_RS16605 f749e6d582c521d530a342db6476b97c 276 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 23 93 1.8E-18 T 22-04-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 JE55_RS16605 f749e6d582c521d530a342db6476b97c 276 PANTHER PTHR21367 23 250 5.2E-62 T 22-04-2016 IPR030700 Arginine-tRNA-protein transferase JE55_RS06245 acd9b61514ec125219ea63ed3a5b5306 413 PANTHER PTHR23100:SF0 18 413 3.9E-171 T 22-04-2016 JE55_RS06245 acd9b61514ec125219ea63ed3a5b5306 413 PANTHER PTHR23100 18 413 3.9E-171 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 JE55_RS06245 acd9b61514ec125219ea63ed3a5b5306 413 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 413 159.168 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 JE55_RS06245 acd9b61514ec125219ea63ed3a5b5306 413 SUPERFAMILY SSF56266 16 410 1.96E-136 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 JE55_RS06245 acd9b61514ec125219ea63ed3a5b5306 413 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 24 411 0.0 T 22-04-2016 JE55_RS06245 acd9b61514ec125219ea63ed3a5b5306 413 Gene3D G3DSA:3.60.70.12 12 284 3.0E-97 T 22-04-2016 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 JE55_RS06245 acd9b61514ec125219ea63ed3a5b5306 413 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 18 413 4.4E-119 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 JE55_RS06245 acd9b61514ec125219ea63ed3a5b5306 413 Pfam PF01960 ArgJ family 24 413 8.6E-143 T 22-04-2016 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068|UniPathway: UPA00068 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 SUPERFAMILY SSF82866 820 1042 1.96E-47 T 22-04-2016 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 SUPERFAMILY SSF82693 146 192 2.41E-15 T 22-04-2016 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 SUPERFAMILY SSF82693 283 333 2.41E-15 T 22-04-2016 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 Gene3D G3DSA:1.10.3850.10 828 1039 3.5E-51 T 22-04-2016 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 SUPERFAMILY SSF82714 737 820 1.83E-11 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 Gene3D G3DSA:3.30.2090.10 195 275 6.4E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 Gene3D G3DSA:3.30.2090.10 736 820 3.2E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 Gene3D G3DSA:1.20.1640.10 300 513 1.0E-37 T 22-04-2016 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 Gene3D G3DSA:3.30.70.1430 50 148 7.9E-21 T 22-04-2016 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 Gene3D G3DSA:3.30.70.1430 587 661 1.2E-5 T 22-04-2016 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 SUPERFAMILY SSF82866 312 503 9.94E-32 T 22-04-2016 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 PRINTS PR00702 Acriflavin resistance protein family signature 569 586 2.5E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 PRINTS PR00702 Acriflavin resistance protein family signature 399 423 2.5E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 2.5E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 2.5E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 PRINTS PR00702 Acriflavin resistance protein family signature 345 368 2.5E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 PRINTS PR00702 Acriflavin resistance protein family signature 48 66 2.5E-21 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 SUPERFAMILY SSF82693 583 663 1.36E-6 T 22-04-2016 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 PANTHER PTHR32063 10 1048 0.0 T 22-04-2016 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 Pfam PF00873 AcrB/AcrD/AcrF family 17 1035 1.2E-147 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 SUPERFAMILY SSF82714 195 275 2.49E-12 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 SUPERFAMILY SSF82693 50 145 1.31E-18 T 22-04-2016 JE55_RS18120 0fd8a521dd289a99221805bf27d76ac0 1056 PANTHER PTHR32063:SF18 10 1048 0.0 T 22-04-2016 JE55_RS14845 dcc1577ba2ccdc242665217ad2db645d 274 Pfam PF06764 Protein of unknown function (DUF1223) 47 256 2.8E-56 T 22-04-2016 IPR010634 Protein of unknown function DUF1223 JE55_RS14845 dcc1577ba2ccdc242665217ad2db645d 274 PANTHER PTHR36057 3 274 1.4E-28 T 22-04-2016 JE55_RS14845 dcc1577ba2ccdc242665217ad2db645d 274 PANTHER PTHR36057:SF1 3 274 1.4E-28 T 22-04-2016 JE55_RS14845 dcc1577ba2ccdc242665217ad2db645d 274 SUPERFAMILY SSF52833 41 272 3.91E-58 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 SUPERFAMILY SSF55594 191 269 2.88E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 554 834 2.2E-96 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 12 132 2.1E-37 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 Pfam PF00391 PEP-utilising enzyme, mobile domain 450 523 4.6E-21 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 Gene3D G3DSA:3.30.1340.10 190 266 2.1E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 SUPERFAMILY SSF52009 424 542 1.29E-28 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 740 758 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 482 493 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 Gene3D G3DSA:2.70.70.10 4 155 1.4E-52 T 22-04-2016 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 11 135 5.3E-42 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 74 86 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 Pfam PF05524 PEP-utilising enzyme, N-terminal 306 425 3.6E-20 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 Gene3D G3DSA:3.20.20.60 555 860 1.6E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 SUPERFAMILY SSF51621 554 842 3.43E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 Gene3D G3DSA:3.50.30.10 431 554 1.9E-32 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 189 265 1.5E-14 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 PANTHER PTHR22931:SF15 339 843 2.0E-193 T 22-04-2016 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 PANTHER PTHR22931 339 843 2.0E-193 T 22-04-2016 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 SUPERFAMILY SSF51261 7 155 7.32E-48 T 22-04-2016 IPR011055 Duplicated hybrid motif JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 200 207 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 PRINTS PR00107 Phosphocarrier protein signature 200 216 5.2E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 PRINTS PR00107 Phosphocarrier protein signature 240 257 5.2E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 PRINTS PR00107 Phosphocarrier protein signature 225 240 5.2E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 Gene3D G3DSA:1.10.274.10 324 430 1.7E-27 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 305 855 5.4E-136 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 SUPERFAMILY SSF47831 326 440 1.44E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 Pfam PF00381 PTS HPr component phosphorylation site 190 265 1.6E-13 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 740 755 9.2E-18 T 22-04-2016 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 757 772 9.2E-18 T 22-04-2016 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 591 610 9.2E-18 T 22-04-2016 JE55_RS10975 6c4ca21522bc5093363d5cfaa5132c06 865 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 793 805 9.2E-18 T 22-04-2016 JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 PANTHER PTHR10804 7 252 1.0E-126 T 22-04-2016 JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 Hamap MF_01974 Methionine aminopeptidase [map]. 7 254 39.882 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 171 189 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 73 86 2.6E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 165 177 2.6E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 208 2.6E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 95 111 2.6E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 PANTHER PTHR10804:SF75 7 252 1.0E-126 T 22-04-2016 JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 8 252 8.5E-93 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 Gene3D G3DSA:3.90.230.10 9 258 6.2E-94 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 Pfam PF00557 Metallopeptidase family M24 17 245 3.0E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS01510 5741d0e2065423c0aa170c47eac3b762 272 SUPERFAMILY SSF55920 9 257 2.09E-90 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS13005 9b9e67479368af7a69464a7e3383c505 123 Gene3D G3DSA:2.60.40.1220 27 123 5.7E-27 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like JE55_RS13005 9b9e67479368af7a69464a7e3383c505 123 PANTHER PTHR34820 7 122 1.1E-12 T 22-04-2016 JE55_RS13005 9b9e67479368af7a69464a7e3383c505 123 SUPERFAMILY SSF81296 27 123 1.18E-25 T 22-04-2016 IPR014756 Immunoglobulin E-set JE55_RS13005 9b9e67479368af7a69464a7e3383c505 123 PANTHER PTHR34820:SF1 7 122 1.1E-12 T 22-04-2016 IPR032694 Copper transport protein YcnJ GO:0006825 JE55_RS13005 9b9e67479368af7a69464a7e3383c505 123 Pfam PF04234 CopC domain 28 122 1.6E-22 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PANTHER PTHR22912:SF160 110 576 1.2E-257 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 Gene3D G3DSA:2.40.50.100 5 79 5.0E-22 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 124 575 1.4E-143 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 464 572 6.9E-32 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 Gene3D G3DSA:3.50.50.60 376 459 1.3E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 SUPERFAMILY SSF51230 2 95 1.31E-23 T 22-04-2016 IPR011053 Single hybrid motif JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PIRSF PIRSF000350 15 583 4.8E-81 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 311 1.8E-40 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 410 432 1.8E-40 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 126 145 1.8E-40 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 273 1.8E-40 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 381 397 1.8E-40 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 Pfam PF00364 Biotin-requiring enzyme 5 75 8.3E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PANTHER PTHR22912 110 576 1.2E-257 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 Gene3D G3DSA:3.50.50.60 273 375 3.8E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 Gene3D G3DSA:3.50.50.60 123 266 2.2E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 Gene3D G3DSA:3.30.390.30 460 575 6.9E-43 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 SUPERFAMILY SSF51905 121 454 2.53E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 159 169 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 460 481 1.9E-70 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 173 1.9E-70 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 125 147 1.9E-70 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 258 267 1.9E-70 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 525 540 1.9E-70 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 432 1.9E-70 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 293 318 1.9E-70 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 547 567 1.9E-70 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 382 396 1.9E-70 T 22-04-2016 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 125 445 2.4E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02215 c8ab3c43cea7cc8f7a62986ab699c164 589 SUPERFAMILY SSF55424 460 583 3.09E-37 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 Gene3D G3DSA:3.40.50.10420 187 293 1.2E-43 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 Gene3D G3DSA:3.40.50.10420 62 125 1.2E-43 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 PANTHER PTHR32479 13 475 2.9E-147 T 22-04-2016 JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 Pfam PF13183 4Fe-4S dicluster domain 307 374 2.8E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 SUPERFAMILY SSF54862 308 401 1.72E-15 T 22-04-2016 JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 Pfam PF11870 Domain of unknown function (DUF3390) 393 471 1.1E-9 T 22-04-2016 IPR024569 4Fe-4S binding protein, C-terminal JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 67 292 3.6E-52 T 22-04-2016 IPR003741 LUD domain JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 Gene3D G3DSA:1.10.1060.10 305 397 1.1E-12 T 22-04-2016 JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 PANTHER PTHR32479:SF10 13 475 2.9E-147 T 22-04-2016 JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 SUPERFAMILY SSF100950 132 293 2.8E-34 T 22-04-2016 JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 SUPERFAMILY SSF100950 62 86 2.8E-34 T 22-04-2016 JE55_RS02190 23e1c8ed53b0a647151cfcaf8407128e 483 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 310 321 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS07645 a91d72b96e41d91d94c61b7d706dc449 251 Gene3D G3DSA:3.10.20.30 28 75 2.3E-8 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS07645 a91d72b96e41d91d94c61b7d706dc449 251 Pfam PF01927 Mut7-C RNAse domain 96 239 3.4E-48 T 22-04-2016 IPR002782 Mut7-C RNAse domain JE55_RS07645 a91d72b96e41d91d94c61b7d706dc449 251 SUPERFAMILY SSF54285 24 75 1.8E-6 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JE55_RS07645 a91d72b96e41d91d94c61b7d706dc449 251 PANTHER PTHR12124 48 241 1.2E-17 T 22-04-2016 JE55_RS07645 a91d72b96e41d91d94c61b7d706dc449 251 Pfam PF14451 Mut7-C ubiquitin 1 81 5.0E-38 T 22-04-2016 IPR027798 Ubiquitin Mut7-C domain JE55_RS07645 a91d72b96e41d91d94c61b7d706dc449 251 PANTHER PTHR12124:SF44 48 241 1.2E-17 T 22-04-2016 JE55_RS14970 b43dae5768c1375c982c1c13c1d8d427 164 PANTHER PTHR30154:SF28 1 141 5.8E-40 T 22-04-2016 JE55_RS14970 b43dae5768c1375c982c1c13c1d8d427 164 Gene3D G3DSA:3.30.70.920 58 142 1.5E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS14970 b43dae5768c1375c982c1c13c1d8d427 164 SUPERFAMILY SSF46785 2 89 5.97E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14970 b43dae5768c1375c982c1c13c1d8d427 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 1.2E-7 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS14970 b43dae5768c1375c982c1c13c1d8d427 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 1.2E-7 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS14970 b43dae5768c1375c982c1c13c1d8d427 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 52 2.7E-15 T 22-04-2016 JE55_RS14970 b43dae5768c1375c982c1c13c1d8d427 164 Pfam PF01037 Lrp/AsnC ligand binding domain 71 143 2.6E-15 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS14970 b43dae5768c1375c982c1c13c1d8d427 164 PANTHER PTHR30154 1 141 5.8E-40 T 22-04-2016 JE55_RS14970 b43dae5768c1375c982c1c13c1d8d427 164 SMART SM00344 5 114 1.6E-30 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JE55_RS14970 b43dae5768c1375c982c1c13c1d8d427 164 Gene3D G3DSA:1.10.10.10 3 53 8.3E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14970 b43dae5768c1375c982c1c13c1d8d427 164 SUPERFAMILY SSF54909 67 146 5.5E-14 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS17860 1bd5cee17c9e55767b87bb5e4a99ad4f 332 PANTHER PTHR21266 15 121 3.1E-36 T 22-04-2016 JE55_RS17860 1bd5cee17c9e55767b87bb5e4a99ad4f 332 Pfam PF00355 Rieske [2Fe-2S] domain 15 98 2.0E-19 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS17860 1bd5cee17c9e55767b87bb5e4a99ad4f 332 SUPERFAMILY SSF50022 14 124 6.02E-31 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS17860 1bd5cee17c9e55767b87bb5e4a99ad4f 332 Gene3D G3DSA:2.102.10.10 14 125 4.7E-30 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 PANTHER PTHR10055 242 399 2.8E-157 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 PANTHER PTHR10055 5 171 2.8E-157 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 SUPERFAMILY SSF52374 3 172 9.65E-90 T 22-04-2016 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 SUPERFAMILY SSF52374 243 397 9.65E-90 T 22-04-2016 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 Gene3D G3DSA:1.10.240.10 275 365 1.4E-32 T 22-04-2016 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 Gene3D G3DSA:3.40.50.620 4 170 5.5E-88 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 Gene3D G3DSA:3.40.50.620 241 274 5.5E-88 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 PANTHER PTHR10055:SF6 242 399 2.8E-157 T 22-04-2016 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 PANTHER PTHR10055:SF6 5 171 2.8E-157 T 22-04-2016 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 5 176 9.8E-58 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 1.0E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.0E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 145 166 1.0E-22 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 Pfam PF00579 tRNA synthetases class I (W and Y) 5 344 5.5E-58 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS02025 f8c4f3917987469ad91456f4a5038728 400 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 398 35.339 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 JE55_RS00480 481310d834fd3f110bf7835a9245735f 156 Gene3D G3DSA:3.10.350.10 103 154 2.3E-12 T 22-04-2016 IPR018392 LysM domain JE55_RS00480 481310d834fd3f110bf7835a9245735f 156 SMART SM00257 104 153 1.3E-12 T 22-04-2016 IPR018392 LysM domain JE55_RS00480 481310d834fd3f110bf7835a9245735f 156 SUPERFAMILY SSF54106 103 153 3.01E-8 T 22-04-2016 IPR018392 LysM domain JE55_RS00480 481310d834fd3f110bf7835a9245735f 156 Pfam PF01476 LysM domain 105 153 9.1E-12 T 22-04-2016 IPR018392 LysM domain JE55_RS00480 481310d834fd3f110bf7835a9245735f 156 Pfam PF04972 BON domain 33 92 5.6E-7 T 22-04-2016 IPR007055 BON domain JE55_RS00480 481310d834fd3f110bf7835a9245735f 156 PANTHER PTHR34700 1 155 4.0E-18 T 22-04-2016 JE55_RS16595 bba9cab8353cbc5cbd6df93d53231981 264 SMART SM00062 38 258 3.6E-77 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS16595 bba9cab8353cbc5cbd6df93d53231981 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 256 4.6E-65 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS16595 bba9cab8353cbc5cbd6df93d53231981 264 SUPERFAMILY SSF53850 8 258 1.74E-71 T 22-04-2016 JE55_RS16595 bba9cab8353cbc5cbd6df93d53231981 264 PANTHER PTHR18966:SF191 27 256 1.8E-54 T 22-04-2016 JE55_RS16595 bba9cab8353cbc5cbd6df93d53231981 264 PANTHER PTHR18966 27 256 1.8E-54 T 22-04-2016 JE55_RS16595 bba9cab8353cbc5cbd6df93d53231981 264 Gene3D G3DSA:3.40.190.10 124 202 2.0E-26 T 22-04-2016 JE55_RS16595 bba9cab8353cbc5cbd6df93d53231981 264 Gene3D G3DSA:3.40.190.10 34 123 2.6E-43 T 22-04-2016 JE55_RS16595 bba9cab8353cbc5cbd6df93d53231981 264 Gene3D G3DSA:3.40.190.10 217 260 2.6E-43 T 22-04-2016 JE55_RS16595 bba9cab8353cbc5cbd6df93d53231981 264 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 JE55_RS16595 bba9cab8353cbc5cbd6df93d53231981 264 SMART SM00079 38 257 0.003 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 SUPERFAMILY SSF46785 11 84 1.18E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 Gene3D G3DSA:3.40.1410.10 88 241 2.0E-45 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 SMART SM00345 22 81 5.8E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 Pfam PF07702 UTRA domain 102 237 4.6E-37 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 Gene3D G3DSA:1.10.10.10 12 84 6.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 SUPERFAMILY SSF64288 69 244 8.48E-46 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 1.8E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 1.8E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 PANTHER PTHR11751 130 152 2.1E-20 T 22-04-2016 JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 PANTHER PTHR11751 11 84 2.1E-20 T 22-04-2016 JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 SMART SM00866 101 237 1.1E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 PANTHER PTHR11751:SF333 130 152 2.1E-20 T 22-04-2016 JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 PANTHER PTHR11751:SF333 11 84 2.1E-20 T 22-04-2016 JE55_RS10960 71f155e7150b94b3ee44bdf93a7517c7 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 81 1.6E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS17310 0b238a3b594093472d07d592ab735aa1 312 Gene3D G3DSA:3.40.190.120 138 248 1.3E-25 T 22-04-2016 JE55_RS17310 0b238a3b594093472d07d592ab735aa1 312 SUPERFAMILY SSF53850 33 311 5.97E-55 T 22-04-2016 JE55_RS17310 0b238a3b594093472d07d592ab735aa1 312 Gene3D G3DSA:3.40.190.10 31 137 3.4E-52 T 22-04-2016 JE55_RS17310 0b238a3b594093472d07d592ab735aa1 312 Gene3D G3DSA:3.40.190.10 255 312 3.4E-52 T 22-04-2016 JE55_RS17310 0b238a3b594093472d07d592ab735aa1 312 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 33 307 1.8E-55 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 JE55_RS17310 0b238a3b594093472d07d592ab735aa1 312 PANTHER PTHR30177:SF12 34 311 3.6E-107 T 22-04-2016 JE55_RS17310 0b238a3b594093472d07d592ab735aa1 312 PANTHER PTHR30177 34 311 3.6E-107 T 22-04-2016 JE55_RS12930 40803085005886c909cdf1e7013c82fa 278 PANTHER PTHR30471 52 278 1.7E-92 T 22-04-2016 JE55_RS12930 40803085005886c909cdf1e7013c82fa 278 Gene3D G3DSA:1.10.150.20 101 132 3.9E-4 T 22-04-2016 JE55_RS12930 40803085005886c909cdf1e7013c82fa 278 Pfam PF04002 RadC-like JAB domain 158 276 1.3E-38 T 22-04-2016 IPR025657 RadC-like JAB domain JE55_RS12930 40803085005886c909cdf1e7013c82fa 278 TIGRFAM TIGR00608 radc: DNA repair protein RadC 66 278 3.8E-68 T 22-04-2016 IPR001405 RadC protein JE55_RS12930 40803085005886c909cdf1e7013c82fa 278 Gene3D G3DSA:3.40.140.10 154 278 2.8E-44 T 22-04-2016 JE55_RS12930 40803085005886c909cdf1e7013c82fa 278 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 227 232 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site JE55_RS12930 40803085005886c909cdf1e7013c82fa 278 SUPERFAMILY SSF102712 207 245 9.81E-5 T 22-04-2016 JE55_RS12930 40803085005886c909cdf1e7013c82fa 278 PANTHER PTHR30471:SF5 52 278 1.7E-92 T 22-04-2016 JE55_RS12930 40803085005886c909cdf1e7013c82fa 278 SUPERFAMILY SSF47781 69 142 3.91E-9 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 JE55_RS09230 f3d814dad252b1a634f91bd6984ddf8b 285 Hamap MF_00188 Protease HtpX [htpX]. 4 278 28.98 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 JE55_RS09230 f3d814dad252b1a634f91bd6984ddf8b 285 Pfam PF01435 Peptidase family M48 66 278 2.0E-38 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JE55_RS09230 f3d814dad252b1a634f91bd6984ddf8b 285 PANTHER PTHR10120 1 280 7.3E-104 T 22-04-2016 JE55_RS09230 f3d814dad252b1a634f91bd6984ddf8b 285 PANTHER PTHR10120:SF19 1 280 7.3E-104 T 22-04-2016 JE55_RS09230 f3d814dad252b1a634f91bd6984ddf8b 285 Gene3D G3DSA:3.30.2010.10 56 146 1.6E-34 T 22-04-2016 JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 Pfam PF01380 SIS domain 294 417 1.8E-26 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 Pfam PF01380 SIS domain 463 591 2.0E-23 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 SUPERFAMILY SSF56235 2 235 1.37E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 PANTHER PTHR10937 1 610 5.8E-298 T 22-04-2016 JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 Pfam PF13522 Glutamine amidotransferase domain 66 190 8.1E-24 T 22-04-2016 JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 SUPERFAMILY SSF53697 248 610 5.84E-108 T 22-04-2016 JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 Gene3D G3DSA:3.40.50.10490 444 610 9.1E-63 T 22-04-2016 JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 38.418 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 6.9E-241 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 PANTHER PTHR10937:SF0 1 610 5.8E-298 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 Gene3D G3DSA:3.60.20.10 2 235 8.4E-73 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS10000 172bef802260adaf6df6b8c1ca6b7075 610 Gene3D G3DSA:3.40.50.10490 247 443 1.2E-70 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 Gene3D G3DSA:3.30.70.1430 558 648 1.5E-9 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 SUPERFAMILY SSF82693 40 130 9.42E-23 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 SUPERFAMILY SSF82693 268 324 3.14E-22 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 Gene3D G3DSA:3.30.2090.10 183 266 5.2E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 Gene3D G3DSA:1.10.3850.10 799 1012 4.1E-52 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 SUPERFAMILY SSF82693 556 653 7.32E-16 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 Gene3D G3DSA:3.30.70.1430 40 141 1.6E-29 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 SUPERFAMILY SSF82866 290 491 4.19E-46 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 PANTHER PTHR32063:SF21 1 1026 0.0 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 Gene3D G3DSA:1.20.1640.10 285 500 1.6E-57 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 SUPERFAMILY SSF82866 816 1011 2.75E-44 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 SUPERFAMILY SSF82714 708 791 6.8E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 SUPERFAMILY SSF82693 793 842 6.28E-12 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 SUPERFAMILY SSF82693 666 706 6.28E-12 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 SUPERFAMILY SSF82714 183 265 2.35E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 SUPERFAMILY SSF82693 136 182 3.14E-22 T 22-04-2016 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 Gene3D G3DSA:3.30.2090.10 707 795 3.3E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.2E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.2E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 PRINTS PR00702 Acriflavin resistance protein family signature 610 624 1.2E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.2E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.2E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.2E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 1.2E-76 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14705 2cd3775c46c2ad927bb194fbb12df873 1036 PANTHER PTHR32063 1 1026 0.0 T 22-04-2016 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 PANTHER PTHR30603 11 150 5.0E-105 T 22-04-2016 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 PANTHER PTHR30603 206 482 5.0E-105 T 22-04-2016 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 270 283 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 Gene3D G3DSA:1.10.601.10 238 315 3.0E-51 T 22-04-2016 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 Gene3D G3DSA:1.10.601.10 77 141 3.0E-51 T 22-04-2016 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 439 465 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 Pfam PF00140 Sigma-70 factor, region 1.2 109 141 4.3E-7 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 Pfam PF04539 Sigma-70 region 3 327 395 6.5E-14 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 PRINTS PR00046 Major sigma-70 factor signature 439 454 9.1E-20 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 PRINTS PR00046 Major sigma-70 factor signature 270 283 9.1E-20 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 PRINTS PR00046 Major sigma-70 factor signature 454 465 9.1E-20 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 PRINTS PR00046 Major sigma-70 factor signature 418 430 9.1E-20 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 PRINTS PR00046 Major sigma-70 factor signature 294 302 9.1E-20 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 SUPERFAMILY SSF88659 377 471 1.31E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 SUPERFAMILY SSF88946 208 316 8.77E-46 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 SUPERFAMILY SSF88946 108 165 8.77E-46 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 Pfam PF04542 Sigma-70 region 2 247 315 1.8E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 Gene3D G3DSA:1.10.10.10 411 479 1.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 243 467 4.4E-31 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 Pfam PF04545 Sigma-70, region 4 414 466 9.5E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 Gene3D G3DSA:1.10.10.10 316 365 7.9E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 PANTHER PTHR30603:SF0 11 150 5.0E-105 T 22-04-2016 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 PANTHER PTHR30603:SF0 206 482 5.0E-105 T 22-04-2016 JE55_RS09115 6e9618f8bc2ed65b5e33fbfd803a984e 482 SUPERFAMILY SSF88659 319 392 5.23E-11 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 SUPERFAMILY SSF48452 111 254 1.19E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 SUPERFAMILY SSF52833 4 106 3.18E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 Pfam PF00085 Thioredoxin 4 103 2.2E-25 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 PANTHER PTHR10438:SF282 1 107 4.5E-36 T 22-04-2016 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 PANTHER PTHR10438:SF282 224 245 4.5E-36 T 22-04-2016 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 Pfam PF14559 Tetratricopeptide repeat 119 186 5.3E-14 T 22-04-2016 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 Gene3D G3DSA:1.25.40.10 195 281 5.3E-29 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 Pfam PF14561 Tetratricopeptide repeat 195 281 1.8E-25 T 22-04-2016 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 TIGRFAM TIGR01068 thioredoxin: thioredoxin 18 103 1.4E-30 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 PANTHER PTHR10438 1 107 4.5E-36 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 PANTHER PTHR10438 224 245 4.5E-36 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 Gene3D G3DSA:1.25.40.10 106 189 6.2E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 JE55_RS12590 17d9dcc814857016dcd65fe5ce22f93e 282 Gene3D G3DSA:3.40.30.10 4 105 4.3E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 Gene3D G3DSA:2.40.50.100 259 295 1.5E-12 T 22-04-2016 JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 Gene3D G3DSA:2.40.50.100 67 102 1.5E-12 T 22-04-2016 JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 390 405 6.3E-14 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 422 6.3E-14 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 278 299 6.3E-14 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 311 335 6.3E-14 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 6.3E-14 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 Pfam PF13533 Biotin-lipoyl like 72 118 2.6E-5 T 22-04-2016 JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 Pfam PF13437 HlyD family secretion protein 266 393 1.2E-11 T 22-04-2016 JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 PANTHER PTHR30386:SF8 1 422 1.2E-79 T 22-04-2016 JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 PANTHER PTHR30386 1 422 1.2E-79 T 22-04-2016 JE55_RS06705 7fa9745d99ab9e6ad493d222d5291477 422 SUPERFAMILY SSF111369 71 156 7.32E-8 T 22-04-2016 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 SUPERFAMILY SSF51735 199 433 1.91E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 232 252 3.4E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 110 124 3.4E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 359 370 3.4E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 190 212 3.4E-33 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 PANTHER PTHR11606 30 432 2.5E-178 T 22-04-2016 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 SMART SM00839 201 431 9.6E-102 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 53 181 1.3E-54 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 Gene3D G3DSA:3.40.50.720 199 433 2.3E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 PIRSF PIRSF000185 24 434 2.6E-162 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 SUPERFAMILY SSF53223 16 201 8.64E-69 T 22-04-2016 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 118 131 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 199 431 6.9E-77 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 JE55_RS05710 66a38b2a294d07261fa267248a11ec07 434 Gene3D G3DSA:3.40.192.10 55 197 3.2E-58 T 22-04-2016 JE55_RS05910 f0bfc07f8f9c00dda10a4f07c6c46c35 357 PANTHER PTHR10091:SF5 23 340 1.2E-27 T 22-04-2016 JE55_RS05910 f0bfc07f8f9c00dda10a4f07c6c46c35 357 Pfam PF01263 Aldose 1-epimerase 53 332 3.9E-28 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 JE55_RS05910 f0bfc07f8f9c00dda10a4f07c6c46c35 357 Gene3D G3DSA:2.70.98.10 50 337 6.9E-18 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 JE55_RS05910 f0bfc07f8f9c00dda10a4f07c6c46c35 357 PANTHER PTHR10091 23 340 1.2E-27 T 22-04-2016 JE55_RS05910 f0bfc07f8f9c00dda10a4f07c6c46c35 357 SUPERFAMILY SSF74650 52 338 1.26E-48 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 JE55_RS10310 037fefcf95eb5c87d28282d2ad638664 442 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 96 229 2.3E-9 T 22-04-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 JE55_RS10310 037fefcf95eb5c87d28282d2ad638664 442 SUPERFAMILY SSF53474 90 323 2.04E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS10310 037fefcf95eb5c87d28282d2ad638664 442 Gene3D G3DSA:3.40.50.1820 84 292 1.6E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS16910 6f0b1d06ebd0d657448c6f6c35bb22a5 271 Gene3D G3DSA:3.40.190.10 215 256 8.7E-39 T 22-04-2016 JE55_RS16910 6f0b1d06ebd0d657448c6f6c35bb22a5 271 Gene3D G3DSA:3.40.190.10 32 113 8.7E-39 T 22-04-2016 JE55_RS16910 6f0b1d06ebd0d657448c6f6c35bb22a5 271 PANTHER PTHR18966 22 267 3.6E-86 T 22-04-2016 JE55_RS16910 6f0b1d06ebd0d657448c6f6c35bb22a5 271 Gene3D G3DSA:3.40.190.10 114 201 3.5E-18 T 22-04-2016 JE55_RS16910 6f0b1d06ebd0d657448c6f6c35bb22a5 271 SUPERFAMILY SSF53850 7 256 2.61E-67 T 22-04-2016 JE55_RS16910 6f0b1d06ebd0d657448c6f6c35bb22a5 271 PANTHER PTHR18966:SF191 22 267 3.6E-86 T 22-04-2016 JE55_RS16910 6f0b1d06ebd0d657448c6f6c35bb22a5 271 SMART SM00062 35 256 1.2E-68 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS16910 6f0b1d06ebd0d657448c6f6c35bb22a5 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 254 1.5E-59 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS03080 669fbb49ee9b84eb6b652738a2a2cb07 406 TIGRFAM TIGR03837 efp_adjacent_2: conserved hypothetical protein, PP_1857 family 29 401 8.7E-148 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 JE55_RS03080 669fbb49ee9b84eb6b652738a2a2cb07 406 Pfam PF10093 Uncharacterized protein conserved in bacteria (DUF2331) 29 401 9.9E-148 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 JE55_RS03080 669fbb49ee9b84eb6b652738a2a2cb07 406 PIRSF PIRSF015557 24 406 1.3E-179 T 22-04-2016 IPR016633 Uncharacterised conserved protein UCP015557 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 PIRSF PIRSF001365 6 300 2.7E-95 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 PANTHER PTHR12128:SF34 1 300 6.1E-134 T 22-04-2016 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 SMART SM01130 10 298 5.2E-146 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 80 98 1.0E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 137 154 1.0E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 112 128 1.0E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 44 65 1.0E-33 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 SUPERFAMILY SSF51569 11 298 3.04E-106 T 22-04-2016 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 142 172 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 14 296 4.0E-111 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 10 296 66.873 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 Pfam PF00701 Dihydrodipicolinate synthetase family 11 295 5.7E-103 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 PANTHER PTHR12128 1 300 6.1E-134 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS02015 f26bdb578f3b1f9c5db212e65389c5f8 300 Gene3D G3DSA:3.20.20.70 10 300 3.5E-120 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 PANTHER PTHR30050 1 103 1.6E-198 T 22-04-2016 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 PANTHER PTHR30050 196 533 1.6E-198 T 22-04-2016 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 SMART SM00760 441 510 3.9E-44 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 SUPERFAMILY SSF52540 197 409 2.93E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 Pfam PF11638 DnaA N-terminal domain 3 66 3.1E-17 T 22-04-2016 IPR024633 DnaA N-terminal domain JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 231 251 1.3E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 295 309 1.3E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 329 356 1.3E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 491 510 1.3E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 263 277 1.3E-49 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 SUPERFAMILY SSF48295 429 532 4.97E-38 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 5 531 1.6E-169 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 PANTHER PTHR30050:SF2 1 103 1.6E-198 T 22-04-2016 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 PANTHER PTHR30050:SF2 196 533 1.6E-198 T 22-04-2016 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 SMART SM00382 230 364 5.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 Gene3D G3DSA:1.10.8.60 364 431 2.9E-29 T 22-04-2016 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 Gene3D G3DSA:3.40.50.300 191 362 4.6E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 2 532 32.055 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 ProSitePatterns PS01008 DnaA protein signature. 491 510 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 Gene3D G3DSA:1.10.1750.10 432 532 3.6E-42 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 Pfam PF00308 Bacterial dnaA protein 198 415 7.0E-86 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA JE55_RS08985 444d5d2bd7f77ba8e58213b3eca92669 533 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 442 510 1.3E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 JE55_RS27620 7fbd5bc9099a6b2bc702f746fd11e803 103 PRINTS PR00113 Alkaline phosphatase signature 56 71 1.6E-14 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS27620 7fbd5bc9099a6b2bc702f746fd11e803 103 PRINTS PR00113 Alkaline phosphatase signature 6 26 1.6E-14 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS27620 7fbd5bc9099a6b2bc702f746fd11e803 103 SUPERFAMILY SSF53649 3 84 7.48E-30 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 JE55_RS27620 7fbd5bc9099a6b2bc702f746fd11e803 103 Pfam PF00245 Alkaline phosphatase 6 83 3.5E-21 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS27620 7fbd5bc9099a6b2bc702f746fd11e803 103 Gene3D G3DSA:3.40.720.10 3 84 1.5E-32 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 JE55_RS27620 7fbd5bc9099a6b2bc702f746fd11e803 103 PANTHER PTHR11596 5 96 1.2E-29 T 22-04-2016 JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 Pfam PF14622 Ribonuclease-III-like 16 138 8.1E-36 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 Hamap MF_00104 Ribonuclease 3 [rnc]. 6 217 29.257 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 SUPERFAMILY SSF54768 106 228 9.27E-26 T 22-04-2016 JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 Gene3D G3DSA:1.10.1520.10 3 145 1.9E-47 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 SMART SM00535 18 146 6.6E-50 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 SMART SM00358 153 221 3.1E-16 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 PANTHER PTHR11207 2 218 3.5E-81 T 22-04-2016 JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 Gene3D G3DSA:3.30.160.20 150 219 8.0E-25 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 6 219 9.4E-71 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 ProSitePatterns PS00517 Ribonuclease III family signature. 35 43 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 SUPERFAMILY SSF69065 3 155 2.96E-47 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 JE55_RS03120 c07b1c998e0b9ddc8e65e02574745118 467 Pfam PF00035 Double-stranded RNA binding motif 153 218 1.2E-11 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain JE55_RS03955 51df36565b0b5a1be81be80abc4c8f59 271 Gene3D G3DSA:3.40.50.300 1 248 2.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03955 51df36565b0b5a1be81be80abc4c8f59 271 PANTHER PTHR13696 1 258 4.6E-88 T 22-04-2016 JE55_RS03955 51df36565b0b5a1be81be80abc4c8f59 271 SUPERFAMILY SSF52540 1 269 4.21E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03955 51df36565b0b5a1be81be80abc4c8f59 271 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 1.1E-29 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS03955 51df36565b0b5a1be81be80abc4c8f59 271 PIRSF PIRSF003092 1 271 5.6E-91 T 22-04-2016 IPR025501 ATP binding protein MinD JE55_RS03955 51df36565b0b5a1be81be80abc4c8f59 271 PANTHER PTHR13696:SF1 1 258 4.6E-88 T 22-04-2016 JE55_RS03955 51df36565b0b5a1be81be80abc4c8f59 271 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 269 1.7E-106 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 JE55_RS08765 8cded8a80a238c973437fc442ea95e32 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 252 5.0E-70 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 JE55_RS08765 8cded8a80a238c973437fc442ea95e32 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.6E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JE55_RS08765 8cded8a80a238c973437fc442ea95e32 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.6E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JE55_RS08765 8cded8a80a238c973437fc442ea95e32 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.6E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JE55_RS08765 8cded8a80a238c973437fc442ea95e32 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.6E-28 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JE55_RS08765 8cded8a80a238c973437fc442ea95e32 260 PANTHER PTHR30065:SF1 2 260 2.8E-77 T 22-04-2016 JE55_RS08765 8cded8a80a238c973437fc442ea95e32 260 Pfam PF01311 Bacterial export proteins, family 1 14 246 1.8E-70 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 JE55_RS08765 8cded8a80a238c973437fc442ea95e32 260 PANTHER PTHR30065 2 260 2.8E-77 T 22-04-2016 JE55_RS05010 25a1fad8657ac8618e541e20242d398c 189 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 149 3.6E-27 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA JE55_RS05010 25a1fad8657ac8618e541e20242d398c 189 SUPERFAMILY SSF56784 3 179 1.35E-40 T 22-04-2016 IPR023214 HAD-like domain JE55_RS05010 25a1fad8657ac8618e541e20242d398c 189 PANTHER PTHR23133:SF3 1 181 6.8E-49 T 22-04-2016 JE55_RS05010 25a1fad8657ac8618e541e20242d398c 189 PIRSF PIRSF004682 1 175 9.6E-52 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 JE55_RS05010 25a1fad8657ac8618e541e20242d398c 189 Pfam PF13242 HAD-hyrolase-like 107 151 1.2E-8 T 22-04-2016 JE55_RS05010 25a1fad8657ac8618e541e20242d398c 189 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 3 156 2.3E-52 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 JE55_RS05010 25a1fad8657ac8618e541e20242d398c 189 PANTHER PTHR23133 1 181 6.8E-49 T 22-04-2016 JE55_RS05010 25a1fad8657ac8618e541e20242d398c 189 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 150 2.1E-32 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 JE55_RS05010 25a1fad8657ac8618e541e20242d398c 189 Gene3D G3DSA:3.40.50.1000 2 179 7.2E-49 T 22-04-2016 IPR023214 HAD-like domain JE55_RS05135 f5ce798c1b17564d32cdf453f85ae673 241 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 6 228 6.2E-76 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 JE55_RS05135 f5ce798c1b17564d32cdf453f85ae673 241 Gene3D G3DSA:3.40.50.300 4 159 6.4E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05135 f5ce798c1b17564d32cdf453f85ae673 241 Gene3D G3DSA:1.10.8.60 163 228 1.5E-27 T 22-04-2016 JE55_RS05135 f5ce798c1b17564d32cdf453f85ae673 241 SUPERFAMILY SSF52540 13 208 1.59E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05135 f5ce798c1b17564d32cdf453f85ae673 241 PANTHER PTHR30050:SF5 5 227 4.5E-43 T 22-04-2016 JE55_RS05135 f5ce798c1b17564d32cdf453f85ae673 241 PANTHER PTHR30050 5 227 4.5E-43 T 22-04-2016 JE55_RS05135 f5ce798c1b17564d32cdf453f85ae673 241 Pfam PF00308 Bacterial dnaA protein 97 206 1.7E-7 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA JE55_RS13285 0ad72b2e111b3ae157d9e9977b1ceaa7 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 191 211 6.5E-7 T 22-04-2016 JE55_RS13285 0ad72b2e111b3ae157d9e9977b1ceaa7 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 171 190 6.5E-7 T 22-04-2016 JE55_RS13285 0ad72b2e111b3ae157d9e9977b1ceaa7 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 153 170 6.5E-7 T 22-04-2016 JE55_RS13285 0ad72b2e111b3ae157d9e9977b1ceaa7 215 Pfam PF00691 OmpA family 107 202 3.0E-22 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS13285 0ad72b2e111b3ae157d9e9977b1ceaa7 215 Pfam PF13441 YMGG-like Gly-zipper 29 70 1.1E-7 T 22-04-2016 IPR027367 YMGG-like Gly-zipper JE55_RS13285 0ad72b2e111b3ae157d9e9977b1ceaa7 215 PANTHER PTHR30128 33 209 1.2E-50 T 22-04-2016 JE55_RS13285 0ad72b2e111b3ae157d9e9977b1ceaa7 215 Gene3D G3DSA:3.30.1330.60 89 208 1.0E-41 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS13285 0ad72b2e111b3ae157d9e9977b1ceaa7 215 PRINTS PR01021 OMPA domain signature 108 130 1.2E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS13285 0ad72b2e111b3ae157d9e9977b1ceaa7 215 PRINTS PR01021 OMPA domain signature 138 153 1.2E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS13285 0ad72b2e111b3ae157d9e9977b1ceaa7 215 PRINTS PR01021 OMPA domain signature 153 169 1.2E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS13285 0ad72b2e111b3ae157d9e9977b1ceaa7 215 SUPERFAMILY SSF103088 96 208 4.84E-39 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 Gene3D G3DSA:3.40.190.10 176 274 8.6E-26 T 22-04-2016 JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 Pfam PF03466 LysR substrate binding domain 102 302 1.3E-23 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 PANTHER PTHR30118 1 306 2.1E-78 T 22-04-2016 JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 PANTHER PTHR30118:SF8 1 306 2.1E-78 T 22-04-2016 JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 SUPERFAMILY SSF53850 92 301 5.07E-42 T 22-04-2016 JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 68 6.8E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 Gene3D G3DSA:3.40.190.10 278 305 2.2E-28 T 22-04-2016 JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 Gene3D G3DSA:3.40.190.10 92 175 2.2E-28 T 22-04-2016 JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 Gene3D G3DSA:1.10.10.10 3 85 4.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00955 c3c328468175ce8fe23b672b1bece696 309 SUPERFAMILY SSF46785 8 85 4.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10880 55b216c3c25316c2d032d44f857e52a0 347 PANTHER PTHR24220 67 253 1.3E-27 T 22-04-2016 JE55_RS10880 55b216c3c25316c2d032d44f857e52a0 347 SUPERFAMILY SSF52540 63 259 8.59E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10880 55b216c3c25316c2d032d44f857e52a0 347 PANTHER PTHR24220:SF414 67 253 1.3E-27 T 22-04-2016 JE55_RS10880 55b216c3c25316c2d032d44f857e52a0 347 Pfam PF00005 ABC transporter 67 201 3.7E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS10880 55b216c3c25316c2d032d44f857e52a0 347 SMART SM00382 72 248 7.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS10880 55b216c3c25316c2d032d44f857e52a0 347 Gene3D G3DSA:3.40.50.300 64 269 2.3E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16940 a94bb2204a0a4d6eb0dba901dd9179a8 399 PANTHER PTHR30158 1 399 1.3E-164 T 22-04-2016 JE55_RS16940 a94bb2204a0a4d6eb0dba901dd9179a8 399 PANTHER PTHR30158:SF7 1 399 1.3E-164 T 22-04-2016 JE55_RS16940 a94bb2204a0a4d6eb0dba901dd9179a8 399 SUPERFAMILY SSF111369 53 299 8.11E-72 T 22-04-2016 JE55_RS16940 a94bb2204a0a4d6eb0dba901dd9179a8 399 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 60 294 2.4E-15 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JE55_RS16940 a94bb2204a0a4d6eb0dba901dd9179a8 399 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 375 4.7E-74 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 JE55_RS16940 a94bb2204a0a4d6eb0dba901dd9179a8 399 Gene3D G3DSA:2.40.50.100 64 98 4.5E-22 T 22-04-2016 JE55_RS16940 a94bb2204a0a4d6eb0dba901dd9179a8 399 Gene3D G3DSA:2.40.50.100 173 207 4.5E-22 T 22-04-2016 JE55_RS09770 10d92d4b6c016d8ca67c82eb0b18f995 280 Pfam PF03963 Flagellar hook capping protein - N-terminal region 46 116 2.9E-20 T 22-04-2016 IPR005648 Flagellar hook capping protein JE55_RS09770 10d92d4b6c016d8ca67c82eb0b18f995 280 Pfam PF13860 FlgD Ig-like domain 141 218 1.9E-23 T 22-04-2016 IPR025965 FlgD Ig-like domain JE55_RS09770 10d92d4b6c016d8ca67c82eb0b18f995 280 PANTHER PTHR30435 50 278 1.1E-40 T 22-04-2016 JE55_RS09770 10d92d4b6c016d8ca67c82eb0b18f995 280 Pfam PF13861 FlgD Tudor-like domain 125 259 7.8E-13 T 22-04-2016 IPR025963 FlgD Tudor-like domain JE55_RS09770 10d92d4b6c016d8ca67c82eb0b18f995 280 PANTHER PTHR30435:SF15 50 278 1.1E-40 T 22-04-2016 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 SUPERFAMILY SSF56059 128 408 2.83E-107 T 22-04-2016 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.1E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 304 333 2.1E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 211 230 2.1E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.1E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 175 187 2.1E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 387 405 2.1E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 246 263 2.1E-66 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 PANTHER PTHR11405:SF5 1 1072 0.0 T 22-04-2016 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Gene3D G3DSA:3.40.50.1380 948 1082 3.7E-41 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 SUPERFAMILY SSF56059 675 944 1.29E-100 T 22-04-2016 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 SUPERFAMILY SSF52335 946 1082 3.92E-38 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 711 725 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 171 185 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 SMART SM00851 966 1053 1.2E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Gene3D G3DSA:3.30.1490.20 143 206 2.0E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 304 311 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 849 856 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 SUPERFAMILY SSF52440 559 677 9.93E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 SUPERFAMILY SSF52440 1 127 2.59E-51 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Gene3D G3DSA:3.40.50.20 3 108 2.8E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Gene3D G3DSA:3.30.470.20 747 945 7.0E-78 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Gene3D G3DSA:3.30.470.20 207 406 1.6E-76 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 PANTHER PTHR11405 1 1072 0.0 T 22-04-2016 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 341 1.2E-70 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 675 886 3.1E-32 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Gene3D G3DSA:3.30.1490.20 689 746 4.6E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Gene3D G3DSA:1.10.1030.10 407 540 8.1E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Pfam PF02142 MGS-like domain 967 1053 9.5E-21 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 SMART SM01096 426 549 1.3E-74 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Gene3D G3DSA:3.40.50.20 541 664 1.6E-61 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1079 13.354 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1063 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 429 549 9.0E-39 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 SUPERFAMILY SSF48108 403 556 7.85E-53 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15205 edd8b357ffd4ff94d98e7c042d510f93 1084 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1074 13.171 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS17700 11e526eccb1196537c7a0a7bb765a331 232 Gene3D G3DSA:1.10.10.10 8 76 1.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17700 11e526eccb1196537c7a0a7bb765a331 232 Gene3D G3DSA:1.20.120.530 80 222 4.5E-26 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS17700 11e526eccb1196537c7a0a7bb765a331 232 SMART SM00895 85 209 2.1E-19 T 22-04-2016 IPR011711 GntR, C-terminal JE55_RS17700 11e526eccb1196537c7a0a7bb765a331 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 19 72 1.3E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS17700 11e526eccb1196537c7a0a7bb765a331 232 SMART SM00345 17 75 4.7E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS17700 11e526eccb1196537c7a0a7bb765a331 232 SUPERFAMILY SSF46785 10 79 2.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17700 11e526eccb1196537c7a0a7bb765a331 232 SUPERFAMILY SSF48008 84 217 3.14E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS17700 11e526eccb1196537c7a0a7bb765a331 232 PANTHER PTHR11751 14 101 9.4E-25 T 22-04-2016 JE55_RS17700 11e526eccb1196537c7a0a7bb765a331 232 Pfam PF07729 FCD domain 85 209 3.1E-27 T 22-04-2016 IPR011711 GntR, C-terminal JE55_RS17700 11e526eccb1196537c7a0a7bb765a331 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 4.4E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS17700 11e526eccb1196537c7a0a7bb765a331 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 4.4E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 SMART SM00863 653 695 3.1E-18 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 SUPERFAMILY SSF101353 252 444 4.71E-61 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 Gene3D G3DSA:3.30.930.10 1 247 7.2E-126 T 22-04-2016 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 PANTHER PTHR11777 1 874 0.0 T 22-04-2016 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 SUPERFAMILY SSF55186 552 707 5.89E-49 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 Pfam PF01411 tRNA synthetases class II (A) 5 555 3.5E-223 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 SUPERFAMILY SSF50447 453 552 8.7E-19 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 695 3.5E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 PANTHER PTHR11777:SF9 1 874 0.0 T 22-04-2016 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 Pfam PF02272 DHHA1 domain 800 866 2.7E-15 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 1.9E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 205 216 1.9E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 1.9E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 232 245 1.9E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.9E-32 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 874 205.783 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 SUPERFAMILY SSF55681 2 251 2.16E-109 T 22-04-2016 JE55_RS15840 fb89e5b9451afc7f6b174802cc616b35 874 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 853 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 SMART SM00642 121 510 3.9E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 PIRSF PIRSF006337 10 597 1.5E-222 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 PANTHER PTHR10357:SF110 495 577 7.7E-107 T 22-04-2016 JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 PANTHER PTHR10357:SF110 14 460 7.7E-107 T 22-04-2016 JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 Pfam PF00128 Alpha amylase, catalytic domain 133 211 1.2E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 Gene3D G3DSA:2.60.40.10 15 99 1.2E-25 T 22-04-2016 IPR013783 Immunoglobulin-like fold JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 24 564 8.1E-199 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 Gene3D G3DSA:3.20.20.80 494 512 2.7E-76 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 Gene3D G3DSA:3.20.20.80 113 459 2.7E-76 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 Pfam PF11941 Domain of unknown function (DUF3459) 502 597 1.4E-10 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 SUPERFAMILY SSF81296 8 99 3.27E-18 T 22-04-2016 IPR014756 Immunoglobulin E-set JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 SUPERFAMILY SSF51445 96 512 1.77E-104 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 PANTHER PTHR10357 495 577 7.7E-107 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS15450 c18705635417addc0144b4ae3ae4f680 634 PANTHER PTHR10357 14 460 7.7E-107 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS32165 eb4bdfae4d8936c1c05182903c9441a7 397 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 11 397 4.2E-152 T 22-04-2016 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain JE55_RS32165 eb4bdfae4d8936c1c05182903c9441a7 397 SUPERFAMILY SSF56112 161 251 9.95E-9 T 22-04-2016 IPR011009 Protein kinase-like domain JE55_RS32165 eb4bdfae4d8936c1c05182903c9441a7 397 SUPERFAMILY SSF56112 297 396 9.95E-9 T 22-04-2016 IPR011009 Protein kinase-like domain JE55_RS03230 b0ed43a1b4456b713cb0b16d2639c1d1 335 Pfam PF01479 S4 domain 29 75 5.0E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS03230 b0ed43a1b4456b713cb0b16d2639c1d1 335 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 148 162 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS03230 b0ed43a1b4456b713cb0b16d2639c1d1 335 PANTHER PTHR11079 16 333 9.2E-119 T 22-04-2016 JE55_RS03230 b0ed43a1b4456b713cb0b16d2639c1d1 335 Pfam PF00849 RNA pseudouridylate synthase 110 261 5.1E-26 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS03230 b0ed43a1b4456b713cb0b16d2639c1d1 335 SUPERFAMILY SSF55174 28 79 1.37E-7 T 22-04-2016 JE55_RS03230 b0ed43a1b4456b713cb0b16d2639c1d1 335 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 26 328 1.5E-77 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS03230 b0ed43a1b4456b713cb0b16d2639c1d1 335 PANTHER PTHR11079:SF84 16 333 9.2E-119 T 22-04-2016 JE55_RS03230 b0ed43a1b4456b713cb0b16d2639c1d1 335 SUPERFAMILY SSF55120 95 328 1.57E-64 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS03230 b0ed43a1b4456b713cb0b16d2639c1d1 335 SMART SM00363 29 88 1.3E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS05760 a863f734c75b0cdc674f57f32dcb7560 423 Pfam PF00171 Aldehyde dehydrogenase family 12 311 7.5E-14 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS05760 a863f734c75b0cdc674f57f32dcb7560 423 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 329 350 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 JE55_RS05760 a863f734c75b0cdc674f57f32dcb7560 423 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 6 422 40.897 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 JE55_RS05760 a863f734c75b0cdc674f57f32dcb7560 423 Gene3D G3DSA:3.40.309.10 227 380 1.4E-40 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS05760 a863f734c75b0cdc674f57f32dcb7560 423 PIRSF PIRSF000151 1 423 1.9E-169 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 JE55_RS05760 a863f734c75b0cdc674f57f32dcb7560 423 Gene3D G3DSA:3.40.605.10 3 225 2.6E-96 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS05760 a863f734c75b0cdc674f57f32dcb7560 423 Gene3D G3DSA:3.40.605.10 381 421 2.6E-96 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS05760 a863f734c75b0cdc674f57f32dcb7560 423 PANTHER PTHR11063:SF8 4 420 9.9E-170 T 22-04-2016 JE55_RS05760 a863f734c75b0cdc674f57f32dcb7560 423 PANTHER PTHR11063 4 420 9.9E-170 T 22-04-2016 JE55_RS05760 a863f734c75b0cdc674f57f32dcb7560 423 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 14 412 6.0E-147 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 JE55_RS05760 a863f734c75b0cdc674f57f32dcb7560 423 SUPERFAMILY SSF53720 6 420 3.14E-115 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 144 163 2.4E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 472 486 2.4E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 486 499 2.4E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 454 472 2.4E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 256 274 2.4E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 PRINTS PR00662 Glucose-6-phosphate isomerase signature 333 354 2.4E-52 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 Gene3D G3DSA:3.40.50.10490 110 285 3.9E-74 T 22-04-2016 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 260 273 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 Gene3D G3DSA:1.10.1390.10 496 536 2.6E-16 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 513 40.057 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 PANTHER PTHR11469 1 533 4.0E-262 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 Pfam PF00342 Phosphoglucose isomerase 52 531 5.1E-196 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 SUPERFAMILY SSF53697 2 536 5.84E-198 T 22-04-2016 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 Gene3D G3DSA:3.40.50.10490 6 98 5.1E-127 T 22-04-2016 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 Gene3D G3DSA:3.40.50.10490 288 495 5.1E-127 T 22-04-2016 JE55_RS00675 28645588393fe9a39c84ada5378e8f39 540 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 486 503 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS07865 7b7b06438b2870a8a36e9a726cb8ac2c 276 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 6 274 2.5E-101 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 JE55_RS07865 7b7b06438b2870a8a36e9a726cb8ac2c 276 PANTHER PTHR21091 133 262 7.2E-39 T 22-04-2016 JE55_RS07865 7b7b06438b2870a8a36e9a726cb8ac2c 276 Gene3D G3DSA:3.20.20.220 6 275 2.3E-107 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like JE55_RS07865 7b7b06438b2870a8a36e9a726cb8ac2c 276 PANTHER PTHR21091:SF31 133 262 7.2E-39 T 22-04-2016 JE55_RS07865 7b7b06438b2870a8a36e9a726cb8ac2c 276 Pfam PF02219 Methylenetetrahydrofolate reductase 5 275 6.0E-92 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 JE55_RS07865 7b7b06438b2870a8a36e9a726cb8ac2c 276 SUPERFAMILY SSF51730 5 275 2.16E-99 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 Pfam PF10396 GTP-binding protein TrmE N-terminus 8 130 8.0E-33 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 PANTHER PTHR11649:SF56 10 467 3.1E-143 T 22-04-2016 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 PANTHER PTHR11649 10 467 3.1E-143 T 22-04-2016 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 13 467 2.3E-96 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 SUPERFAMILY SSF52540 78 173 4.38E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 SUPERFAMILY SSF52540 207 383 4.38E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 Gene3D G3DSA:3.40.50.300 296 386 8.1E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 Pfam PF12631 MnmE helical domain 133 464 1.6E-55 T 22-04-2016 IPR025867 MnmE, helical domain JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 Gene3D G3DSA:3.40.50.300 226 258 3.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 Pfam PF01926 50S ribosome-binding GTPase 229 342 4.7E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 Gene3D G3DSA:3.30.1360.120 3 131 8.8E-39 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 296 314 9.5E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 229 249 9.5E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 Gene3D G3DSA:1.20.120.430 396 467 3.3E-55 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 Gene3D G3DSA:1.20.120.430 259 281 3.3E-55 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 Gene3D G3DSA:1.20.120.430 132 192 3.3E-55 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 228 381 2.7E-24 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 SUPERFAMILY SSF116878 391 467 3.01E-48 T 22-04-2016 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 SUPERFAMILY SSF116878 131 230 3.01E-48 T 22-04-2016 JE55_RS09015 56dde714ea49e6a16b817920e3213f9b 467 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 7 467 31.845 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 JE55_RS10950 e0ecb03596579547b6b0c844e28a610f 588 PANTHER PTHR22754 30 572 1.4E-77 T 22-04-2016 JE55_RS10950 e0ecb03596579547b6b0c844e28a610f 588 Gene3D G3DSA:3.40.50.980 36 174 1.1E-15 T 22-04-2016 JE55_RS10950 e0ecb03596579547b6b0c844e28a610f 588 Gene3D G3DSA:3.40.50.980 175 337 6.9E-27 T 22-04-2016 JE55_RS10950 e0ecb03596579547b6b0c844e28a610f 588 Gene3D G3DSA:3.30.300.30 458 561 7.4E-20 T 22-04-2016 JE55_RS10950 e0ecb03596579547b6b0c844e28a610f 588 Gene3D G3DSA:2.30.38.10 383 457 5.0E-17 T 22-04-2016 JE55_RS10950 e0ecb03596579547b6b0c844e28a610f 588 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS10950 e0ecb03596579547b6b0c844e28a610f 588 SUPERFAMILY SSF56801 379 566 4.97E-92 T 22-04-2016 JE55_RS10950 e0ecb03596579547b6b0c844e28a610f 588 SUPERFAMILY SSF56801 30 343 4.97E-92 T 22-04-2016 JE55_RS10950 e0ecb03596579547b6b0c844e28a610f 588 Pfam PF00501 AMP-binding enzyme 35 465 1.0E-59 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS10950 e0ecb03596579547b6b0c844e28a610f 588 Pfam PF13193 AMP-binding enzyme C-terminal domain 473 553 2.1E-7 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 Gene3D G3DSA:2.60.40.10 801 897 2.3E-28 T 22-04-2016 IPR013783 Immunoglobulin-like fold JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 PANTHER PTHR32208 453 897 6.4E-99 T 22-04-2016 JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 SUPERFAMILY SSF89372 87 356 1.44E-5 T 22-04-2016 JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 Gene3D G3DSA:2.130.10.80 425 800 4.1E-69 T 22-04-2016 IPR015916 Galactose oxidase, beta-propeller JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 PANTHER PTHR32208:SF21 453 897 6.4E-99 T 22-04-2016 JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 SUPERFAMILY SSF81296 796 897 2.38E-23 T 22-04-2016 IPR014756 Immunoglobulin E-set JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 Pfam PF07250 Glyoxal oxidase N-terminus 452 651 4.3E-23 T 22-04-2016 IPR009880 Glyoxal oxidase, N-terminal JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 SMART SM00612 482 527 0.0081 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 SMART SM00612 710 762 0.023 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 Pfam PF09118 Domain of unknown function (DUF1929) 800 897 8.9E-23 T 22-04-2016 IPR015202 Domain of unknown function DUF1929 JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 Pfam PF13964 Kelch motif 703 752 5.0E-6 T 22-04-2016 JE55_RS10180 c66ab6d3f4ba2125a850540ae9b8c144 947 SUPERFAMILY SSF50965 451 796 7.98E-44 T 22-04-2016 IPR011043 Galactose oxidase/kelch, beta-propeller JE55_RS16500 175c6e250424cc48a50ebe5175a00293 590 Gene3D G3DSA:3.30.300.30 477 574 9.5E-31 T 22-04-2016 JE55_RS16500 175c6e250424cc48a50ebe5175a00293 590 ProSitePatterns PS00455 Putative AMP-binding domain signature. 229 240 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS16500 175c6e250424cc48a50ebe5175a00293 590 SUPERFAMILY SSF56801 21 578 1.44E-153 T 22-04-2016 JE55_RS16500 175c6e250424cc48a50ebe5175a00293 590 Pfam PF00501 AMP-binding enzyme 47 482 6.8E-109 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS16500 175c6e250424cc48a50ebe5175a00293 590 Gene3D G3DSA:2.30.38.10 401 472 1.8E-26 T 22-04-2016 JE55_RS16500 175c6e250424cc48a50ebe5175a00293 590 PANTHER PTHR24096 200 574 2.5E-169 T 22-04-2016 JE55_RS16500 175c6e250424cc48a50ebe5175a00293 590 PANTHER PTHR24096 17 170 2.5E-169 T 22-04-2016 JE55_RS16500 175c6e250424cc48a50ebe5175a00293 590 Pfam PF13193 AMP-binding enzyme C-terminal domain 491 565 1.5E-20 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS16500 175c6e250424cc48a50ebe5175a00293 590 Gene3D G3DSA:3.40.50.980 40 167 2.8E-42 T 22-04-2016 JE55_RS16500 175c6e250424cc48a50ebe5175a00293 590 Gene3D G3DSA:3.40.50.980 203 234 2.8E-42 T 22-04-2016 JE55_RS16500 175c6e250424cc48a50ebe5175a00293 590 Gene3D G3DSA:3.40.50.980 235 400 1.1E-44 T 22-04-2016 JE55_RS20540 5613e57c584e2a11ce5e3c80a04a6411 561 PANTHER PTHR10909:SF262 14 498 2.2E-171 T 22-04-2016 JE55_RS20540 5613e57c584e2a11ce5e3c80a04a6411 561 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 208 311 4.1E-14 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS20540 5613e57c584e2a11ce5e3c80a04a6411 561 SUPERFAMILY SSF56645 126 331 1.16E-39 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS20540 5613e57c584e2a11ce5e3c80a04a6411 561 Gene3D G3DSA:2.40.110.10 207 310 2.4E-20 T 22-04-2016 JE55_RS20540 5613e57c584e2a11ce5e3c80a04a6411 561 PANTHER PTHR10909 14 498 2.2E-171 T 22-04-2016 JE55_RS20540 5613e57c584e2a11ce5e3c80a04a6411 561 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 322 478 5.2E-35 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS20540 5613e57c584e2a11ce5e3c80a04a6411 561 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 437 456 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JE55_RS20540 5613e57c584e2a11ce5e3c80a04a6411 561 Gene3D G3DSA:1.20.140.10 311 480 9.7E-41 T 22-04-2016 JE55_RS20540 5613e57c584e2a11ce5e3c80a04a6411 561 SUPERFAMILY SSF47203 320 480 3.54E-39 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 PANTHER PTHR24095:SF173 518 1117 3.2E-278 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 PANTHER PTHR24095:SF173 1693 1729 3.2E-278 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 PANTHER PTHR24095:SF173 45 486 3.2E-278 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 Pfam PF13745 HxxPF-repeated domain 365 455 1.9E-25 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 Gene3D G3DSA:2.30.38.10 854 935 3.1E-20 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 Gene3D G3DSA:3.30.300.30 941 1060 5.9E-40 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 SUPERFAMILY SSF47336 1055 1103 1.8E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 Pfam PF00501 AMP-binding enzyme 542 946 1.2E-75 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 Pfam PF00550 Phosphopantetheine attachment site 1059 1103 8.8E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 Gene3D G3DSA:1.10.1200.10 1061 1103 2.8E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 563 970 3.5E-115 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 ProSitePatterns PS00455 Putative AMP-binding domain signature. 681 692 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 PANTHER PTHR24095 518 1117 3.2E-278 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 PANTHER PTHR24095 1693 1729 3.2E-278 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 PANTHER PTHR24095 45 486 3.2E-278 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 SUPERFAMILY SSF52777 48 224 1.11E-46 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1081 1096 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 Pfam PF00668 Condensation domain 44 339 8.6E-64 T 22-04-2016 IPR001242 Condensation domain JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 SUPERFAMILY SSF52777 231 491 1.78E-50 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 Gene3D G3DSA:3.40.50.980 687 836 3.5E-34 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 Gene3D G3DSA:3.40.50.980 536 686 6.8E-40 T 22-04-2016 JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 Pfam PF13193 AMP-binding enzyme C-terminal domain 954 1033 3.9E-12 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17090 1f88455f7712a2558fc7fbe80f6212d2 1731 SUPERFAMILY SSF56801 524 1070 7.33E-137 T 22-04-2016 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 Pfam PF00654 Voltage gated chloride channel 79 420 1.3E-89 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 Gene3D G3DSA:1.10.3080.10 15 436 3.0E-89 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 SMART SM00116 521 571 4.8 T 22-04-2016 IPR000644 CBS domain JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 SMART SM00116 456 504 1.5 T 22-04-2016 IPR000644 CBS domain JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 Pfam PF00571 CBS domain 518 569 3.5E-4 T 22-04-2016 IPR000644 CBS domain JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 PRINTS PR00762 Chloride channel signature 172 191 1.4E-24 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 PRINTS PR00762 Chloride channel signature 388 407 1.4E-24 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 PRINTS PR00762 Chloride channel signature 335 355 1.4E-24 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 PRINTS PR00762 Chloride channel signature 370 386 1.4E-24 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 PRINTS PR00762 Chloride channel signature 121 140 1.4E-24 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 PANTHER PTHR11689:SF14 6 574 3.2E-86 T 22-04-2016 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 SUPERFAMILY SSF81340 11 438 3.27E-108 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 SUPERFAMILY SSF54631 450 572 1.13E-16 T 22-04-2016 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 Gene3D G3DSA:3.10.580.10 449 570 1.3E-14 T 22-04-2016 JE55_RS18105 f9df4ee67366d358c8b36a917c3b692a 579 PANTHER PTHR11689 6 574 3.2E-86 T 22-04-2016 JE55_RS01235 6988c4ca7d5ec047c5af8f203b96ad1d 423 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 277 405 2.0E-6 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 JE55_RS01235 6988c4ca7d5ec047c5af8f203b96ad1d 423 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 277 397 4.4E-10 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 JE55_RS01235 6988c4ca7d5ec047c5af8f203b96ad1d 423 Gene3D G3DSA:3.30.1400.10 272 405 1.7E-28 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 JE55_RS01235 6988c4ca7d5ec047c5af8f203b96ad1d 423 SMART SM00771 273 398 7.9E-19 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 JE55_RS01235 6988c4ca7d5ec047c5af8f203b96ad1d 423 SUPERFAMILY SSF64383 273 405 9.15E-25 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 JE55_RS08115 79e7440c1c8cda68fea9280d2ca27bf7 225 Gene3D G3DSA:3.40.50.10070 46 131 6.3E-5 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 JE55_RS08115 79e7440c1c8cda68fea9280d2ca27bf7 225 PANTHER PTHR41164 1 222 2.0E-57 T 22-04-2016 JE55_RS08115 79e7440c1c8cda68fea9280d2ca27bf7 225 SUPERFAMILY SSF52964 47 145 1.18E-7 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 JE55_RS08115 79e7440c1c8cda68fea9280d2ca27bf7 225 Pfam PF03783 Curli production assembly/transport component CsgG 40 218 3.2E-31 T 22-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 JE55_RS08115 79e7440c1c8cda68fea9280d2ca27bf7 225 PANTHER PTHR41164:SF1 1 222 2.0E-57 T 22-04-2016 JE55_RS13470 fc99f0f0e616413d027f98fe7d6768be 241 SMART SM00862 154 230 7.1E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS13470 fc99f0f0e616413d027f98fe7d6768be 241 PANTHER PTHR26402 3 233 1.5E-89 T 22-04-2016 JE55_RS13470 fc99f0f0e616413d027f98fe7d6768be 241 PANTHER PTHR26402:SF292 3 233 1.5E-89 T 22-04-2016 JE55_RS13470 fc99f0f0e616413d027f98fe7d6768be 241 SMART SM00448 3 114 1.0E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS13470 fc99f0f0e616413d027f98fe7d6768be 241 SUPERFAMILY SSF46894 132 232 2.55E-25 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS13470 fc99f0f0e616413d027f98fe7d6768be 241 SUPERFAMILY SSF52172 3 127 9.11E-42 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS13470 fc99f0f0e616413d027f98fe7d6768be 241 Gene3D G3DSA:3.40.50.2300 3 125 1.2E-41 T 22-04-2016 JE55_RS13470 fc99f0f0e616413d027f98fe7d6768be 241 Gene3D G3DSA:1.10.10.10 131 233 6.0E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13470 fc99f0f0e616413d027f98fe7d6768be 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 230 8.7E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS13470 fc99f0f0e616413d027f98fe7d6768be 241 Pfam PF00072 Response regulator receiver domain 5 114 1.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 Gene3D G3DSA:3.40.50.40 233 346 1.2E-36 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 PIRSF PIRSF500176 19 347 5.6E-79 T 22-04-2016 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 SUPERFAMILY SSF53774 19 346 7.2E-101 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 PANTHER PTHR11707:SF29 18 345 4.7E-85 T 22-04-2016 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 PRINTS PR00139 Asparaginase/glutaminase family signature 23 34 4.0E-22 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 PRINTS PR00139 Asparaginase/glutaminase family signature 280 298 4.0E-22 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 4.0E-22 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 PIRSF PIRSF001220 17 347 4.6E-87 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 17 347 5.1E-117 T 22-04-2016 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 25 33 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 SMART SM00870 22 338 1.5E-139 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 Gene3D G3DSA:3.40.50.1170 20 226 1.4E-72 T 22-04-2016 IPR027474 L-asparaginase, N-terminal JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 PANTHER PTHR11707 18 345 4.7E-85 T 22-04-2016 JE55_RS00490 28626f0c5f73088ffcc237db6878bd63 347 Pfam PF00710 Asparaginase, N-terminal 22 215 3.3E-61 T 22-04-2016 IPR027474 L-asparaginase, N-terminal JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 Gene3D G3DSA:3.50.50.60 154 344 3.0E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 3.2E-37 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PANTHER PTHR22912:SF131 1 127 5.6E-234 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PANTHER PTHR22912:SF131 145 469 5.6E-234 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 SUPERFAMILY SSF51905 1 348 1.04E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 Gene3D G3DSA:3.50.50.60 2 153 1.0E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 Gene3D G3DSA:3.30.390.30 345 472 7.7E-50 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 290 5.8E-45 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 5.8E-45 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 204 5.8E-45 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 5.8E-45 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.8E-45 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PANTHER PTHR22912 1 127 5.6E-234 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PANTHER PTHR22912 145 469 5.6E-234 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PIRSF PIRSF000350 1 474 1.9E-89 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 186 211 1.1E-79 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 1.1E-79 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 1.1E-79 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 1.1E-79 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 289 1.1E-79 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 159 1.1E-79 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.1E-79 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 1.1E-79 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 1.1E-79 T 22-04-2016 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 474 1.6E-170 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 SUPERFAMILY SSF55424 353 472 1.37E-41 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 338 1.5E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS16375 3a1cb0dd17d1f90f630a0a7e8ac1af29 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 JE55_RS02760 ade6dfb372efbd03a7106859ee730d1d 700 Pfam PF05506 Domain of unknown function (DUF756) 506 591 5.9E-22 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 JE55_RS02760 ade6dfb372efbd03a7106859ee730d1d 700 Pfam PF05506 Domain of unknown function (DUF756) 603 684 2.8E-22 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 JE55_RS02760 ade6dfb372efbd03a7106859ee730d1d 700 Pfam PF04185 Phosphoesterase family 47 432 3.3E-127 T 22-04-2016 IPR007312 Phosphoesterase GO:0016788 JE55_RS02760 ade6dfb372efbd03a7106859ee730d1d 700 PANTHER PTHR31956:SF1 4 512 7.1E-168 T 22-04-2016 JE55_RS02760 ade6dfb372efbd03a7106859ee730d1d 700 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 5 698 6.9E-286 T 22-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 JE55_RS02760 ade6dfb372efbd03a7106859ee730d1d 700 PANTHER PTHR31956 4 512 7.1E-168 T 22-04-2016 JE55_RS02760 ade6dfb372efbd03a7106859ee730d1d 700 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 32 0.0012 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JE55_RS14865 c18fb3d2efe04aad1644c5738a4fb6fe 311 Pfam PF00892 EamA-like transporter family 167 300 5.0E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS14865 c18fb3d2efe04aad1644c5738a4fb6fe 311 Pfam PF00892 EamA-like transporter family 28 156 1.3E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS14865 c18fb3d2efe04aad1644c5738a4fb6fe 311 SUPERFAMILY SSF103481 59 160 6.54E-10 T 22-04-2016 JE55_RS14865 c18fb3d2efe04aad1644c5738a4fb6fe 311 PANTHER PTHR32322:SF8 15 297 2.0E-53 T 22-04-2016 JE55_RS14865 c18fb3d2efe04aad1644c5738a4fb6fe 311 SUPERFAMILY SSF103481 221 303 5.23E-10 T 22-04-2016 JE55_RS14865 c18fb3d2efe04aad1644c5738a4fb6fe 311 PANTHER PTHR32322 15 297 2.0E-53 T 22-04-2016 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Gene3D G3DSA:3.30.1300.30 987 1090 3.5E-20 T 22-04-2016 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Gene3D G3DSA:1.20.5.170 606 642 2.0E-5 T 22-04-2016 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 SUPERFAMILY SSF101967 915 992 3.53E-15 T 22-04-2016 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 SUPERFAMILY SSF101967 756 857 8.76E-15 T 22-04-2016 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Pfam PF05658 Head domain of trimeric autotransporter adhesin 356 381 3.8E-4 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Pfam PF05658 Head domain of trimeric autotransporter adhesin 925 951 6.5E-6 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Pfam PF05658 Head domain of trimeric autotransporter adhesin 765 791 3.3E-4 T 22-04-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Pfam PF03895 YadA-like C-terminal region 1015 1090 2.3E-21 T 22-04-2016 IPR005594 YadA-like, C-terminal JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 SUPERFAMILY SSF101967 337 506 7.19E-28 T 22-04-2016 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 682 699 1.1E-8 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 969 989 1.6E-8 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 606 627 2.5E-8 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 829 852 9.9E-10 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 478 501 7.4E-8 T 22-04-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 SUPERFAMILY SSF54523 981 1090 5.18E-22 T 22-04-2016 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 SUPERFAMILY SSF101967 71 204 9.02E-7 T 22-04-2016 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 SUPERFAMILY SSF101967 665 702 4.84E-7 T 22-04-2016 JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Gene3D G3DSA:2.150.10.10 761 856 7.4E-18 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Gene3D G3DSA:2.150.10.10 280 506 3.9E-33 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Gene3D G3DSA:2.150.10.10 910 986 3.3E-16 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Gene3D G3DSA:2.150.10.10 73 203 3.0E-8 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Gene3D G3DSA:2.150.10.10 672 703 3.1E-5 T 22-04-2016 IPR011049 Serralysin-like metalloprotease, C-terminal JE55_RS15545 211e04ceb45f8b4a7eb4787754a191fe 1090 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 4.2E-9 T 22-04-2016 IPR024973 ESPR domain JE55_RS04720 1f4b3878eef8884e5e93465d2737eeca 451 SUPERFAMILY SSF103473 13 443 5.23E-80 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS04720 1f4b3878eef8884e5e93465d2737eeca 451 Pfam PF07690 Major Facilitator Superfamily 35 310 3.8E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS04720 1f4b3878eef8884e5e93465d2737eeca 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 125 150 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS04720 1f4b3878eef8884e5e93465d2737eeca 451 Gene3D G3DSA:1.20.1250.20 22 208 1.4E-35 T 22-04-2016 JE55_RS04720 1f4b3878eef8884e5e93465d2737eeca 451 Gene3D G3DSA:1.20.1250.20 258 437 2.0E-24 T 22-04-2016 JE55_RS04720 1f4b3878eef8884e5e93465d2737eeca 451 PANTHER PTHR24064 37 443 1.8E-108 T 22-04-2016 JE55_RS04720 1f4b3878eef8884e5e93465d2737eeca 451 ProSitePatterns PS00216 Sugar transport proteins signature 1. 83 100 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS04720 1f4b3878eef8884e5e93465d2737eeca 451 PANTHER PTHR24064:SF234 37 443 1.8E-108 T 22-04-2016 JE55_RS17045 cf4750b02eebdbe4416b7877ec4689b5 340 PANTHER PTHR10696 45 208 1.9E-71 T 22-04-2016 JE55_RS17045 cf4750b02eebdbe4416b7877ec4689b5 340 PANTHER PTHR10696 225 333 1.9E-71 T 22-04-2016 JE55_RS17045 cf4750b02eebdbe4416b7877ec4689b5 340 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 35 329 2.0E-45 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 JE55_RS17045 cf4750b02eebdbe4416b7877ec4689b5 340 PANTHER PTHR10696:SF27 45 208 1.9E-71 T 22-04-2016 JE55_RS17045 cf4750b02eebdbe4416b7877ec4689b5 340 PANTHER PTHR10696:SF27 225 333 1.9E-71 T 22-04-2016 JE55_RS17045 cf4750b02eebdbe4416b7877ec4689b5 340 SUPERFAMILY SSF51197 37 330 9.62E-81 T 22-04-2016 JE55_RS17045 cf4750b02eebdbe4416b7877ec4689b5 340 Gene3D G3DSA:3.60.130.10 28 173 1.9E-68 T 22-04-2016 JE55_RS17045 cf4750b02eebdbe4416b7877ec4689b5 340 Gene3D G3DSA:3.60.130.10 205 332 1.9E-68 T 22-04-2016 JE55_RS02155 49f1ae46b1b0c6fcd5524091713386e1 175 Gene3D G3DSA:1.10.287.110 5 77 1.1E-25 T 22-04-2016 IPR001623 DnaJ domain JE55_RS02155 49f1ae46b1b0c6fcd5524091713386e1 175 SUPERFAMILY SSF47144 82 173 8.11E-24 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 JE55_RS02155 49f1ae46b1b0c6fcd5524091713386e1 175 PANTHER PTHR14021:SF15 7 175 3.3E-47 T 22-04-2016 JE55_RS02155 49f1ae46b1b0c6fcd5524091713386e1 175 Gene3D G3DSA:1.20.1280.20 86 173 9.2E-28 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 JE55_RS02155 49f1ae46b1b0c6fcd5524091713386e1 175 SUPERFAMILY SSF46565 7 79 3.53E-17 T 22-04-2016 IPR001623 DnaJ domain JE55_RS02155 49f1ae46b1b0c6fcd5524091713386e1 175 PANTHER PTHR14021 7 175 3.3E-47 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 JE55_RS02155 49f1ae46b1b0c6fcd5524091713386e1 175 SMART SM00271 6 71 1.3E-6 T 22-04-2016 IPR001623 DnaJ domain JE55_RS02155 49f1ae46b1b0c6fcd5524091713386e1 175 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 18 172 2.9E-31 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 JE55_RS02155 49f1ae46b1b0c6fcd5524091713386e1 175 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 6 174 23.826 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 JE55_RS02155 49f1ae46b1b0c6fcd5524091713386e1 175 Pfam PF07743 HSCB C-terminal oligomerisation domain 92 166 1.4E-19 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 JE55_RS02060 e9251dd262890c8d8ba33785665933d3 316 Gene3D G3DSA:1.10.287.480 196 243 2.3E-10 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain JE55_RS02060 e9251dd262890c8d8ba33785665933d3 316 PIRSF PIRSF005261 1 303 2.1E-72 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 JE55_RS02060 e9251dd262890c8d8ba33785665933d3 316 SUPERFAMILY SSF64397 2 250 3.14E-64 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 JE55_RS02060 e9251dd262890c8d8ba33785665933d3 316 Gene3D G3DSA:3.90.1280.10 244 300 6.0E-25 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 JE55_RS02060 e9251dd262890c8d8ba33785665933d3 316 SUPERFAMILY SSF118352 244 300 2.49E-19 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 JE55_RS02060 e9251dd262890c8d8ba33785665933d3 316 PANTHER PTHR30111 3 306 1.4E-52 T 22-04-2016 JE55_RS02060 e9251dd262890c8d8ba33785665933d3 316 PANTHER PTHR30111:SF1 3 306 1.4E-52 T 22-04-2016 JE55_RS02060 e9251dd262890c8d8ba33785665933d3 316 Pfam PF01430 Hsp33 protein 3 291 2.0E-84 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 JE55_RS02060 e9251dd262890c8d8ba33785665933d3 316 Gene3D G3DSA:3.55.30.10 2 186 6.3E-63 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 JE55_RS17010 b3e0eb085781f7100074b198266aa150 339 PANTHER PTHR32196 13 333 1.9E-108 T 22-04-2016 JE55_RS17010 b3e0eb085781f7100074b198266aa150 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 66 330 1.3E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS17010 b3e0eb085781f7100074b198266aa150 339 PANTHER PTHR32196:SF21 13 333 1.9E-108 T 22-04-2016 JE55_RS03520 74c6a6e612806b02fe68e210e502f8a7 259 Gene3D G3DSA:3.40.190.10 21 151 2.6E-56 T 22-04-2016 JE55_RS03520 74c6a6e612806b02fe68e210e502f8a7 259 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 11 259 1.4E-82 T 22-04-2016 IPR004872 Lipoprotein NlpA family JE55_RS03520 74c6a6e612806b02fe68e210e502f8a7 259 SUPERFAMILY SSF53850 23 259 2.29E-88 T 22-04-2016 JE55_RS03520 74c6a6e612806b02fe68e210e502f8a7 259 PIRSF PIRSF002854 1 259 1.2E-104 T 22-04-2016 IPR004872 Lipoprotein NlpA family JE55_RS03520 74c6a6e612806b02fe68e210e502f8a7 259 PANTHER PTHR30429 1 259 2.5E-129 T 22-04-2016 IPR004872 Lipoprotein NlpA family JE55_RS03520 74c6a6e612806b02fe68e210e502f8a7 259 Pfam PF03180 NLPA lipoprotein 24 259 1.0E-95 T 22-04-2016 IPR004872 Lipoprotein NlpA family JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 SMART SM00382 166 317 4.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 PANTHER PTHR32071 4 451 4.4E-216 T 22-04-2016 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 Gene3D G3DSA:3.40.50.2300 3 128 1.2E-32 T 22-04-2016 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 Pfam PF02954 Bacterial regulatory protein, Fis family 401 441 8.4E-9 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 SUPERFAMILY SSF52540 146 377 2.15E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 SUPERFAMILY SSF46689 358 443 1.39E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 SMART SM00448 5 116 3.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 Gene3D G3DSA:1.10.8.60 319 370 3.9E-19 T 22-04-2016 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 Gene3D G3DSA:3.40.50.300 145 317 6.7E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 Pfam PF00072 Response regulator receiver domain 7 116 7.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 PANTHER PTHR32071:SF11 4 451 4.4E-216 T 22-04-2016 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 Pfam PF00158 Sigma-54 interaction domain 146 312 2.1E-66 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 SUPERFAMILY SSF52172 3 190 2.56E-39 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 444 3.5E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 407 424 3.5E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS10605 da2ac7adf24804986820301104ed4c51 451 Gene3D G3DSA:1.10.10.60 371 443 6.8E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS14525 5fd3264fedb9b9bc68a5a98e46c0f69e 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 262 2.9E-55 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 JE55_RS14525 5fd3264fedb9b9bc68a5a98e46c0f69e 263 Gene3D G3DSA:3.90.226.10 14 262 1.1E-71 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS14525 5fd3264fedb9b9bc68a5a98e46c0f69e 263 PANTHER PTHR11941 12 261 1.9E-73 T 22-04-2016 JE55_RS14525 5fd3264fedb9b9bc68a5a98e46c0f69e 263 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 JE55_RS14525 5fd3264fedb9b9bc68a5a98e46c0f69e 263 SUPERFAMILY SSF52096 14 262 3.58E-72 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS09825 888ca0a816ae412333ead37771e67fcb 293 Gene3D G3DSA:3.40.190.10 94 175 6.5E-6 T 22-04-2016 JE55_RS09825 888ca0a816ae412333ead37771e67fcb 293 SUPERFAMILY SSF53850 92 291 6.52E-39 T 22-04-2016 JE55_RS09825 888ca0a816ae412333ead37771e67fcb 293 PANTHER PTHR30537:SF16 1 289 1.0E-107 T 22-04-2016 JE55_RS09825 888ca0a816ae412333ead37771e67fcb 293 Pfam PF03466 LysR substrate binding domain 91 290 2.3E-39 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS09825 888ca0a816ae412333ead37771e67fcb 293 Gene3D G3DSA:3.40.190.10 176 256 9.6E-33 T 22-04-2016 JE55_RS09825 888ca0a816ae412333ead37771e67fcb 293 PANTHER PTHR30537 1 289 1.0E-107 T 22-04-2016 JE55_RS09825 888ca0a816ae412333ead37771e67fcb 293 Gene3D G3DSA:1.10.10.10 3 87 8.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09825 888ca0a816ae412333ead37771e67fcb 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 6.8E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS09825 888ca0a816ae412333ead37771e67fcb 293 SUPERFAMILY SSF46785 4 83 1.82E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17740 2b055be95058423643373720508af258 1082 Pfam PF01627 Hpt domain 996 1079 4.0E-5 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 JE55_RS17740 2b055be95058423643373720508af258 1082 SUPERFAMILY SSF47226 947 1066 5.36E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 JE55_RS17740 2b055be95058423643373720508af258 1082 Pfam PF00072 Response regulator receiver domain 855 964 9.4E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS17740 2b055be95058423643373720508af258 1082 SMART SM00388 493 558 5.6E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS17740 2b055be95058423643373720508af258 1082 Gene3D G3DSA:3.30.450.20 362 500 6.3E-5 T 22-04-2016 JE55_RS17740 2b055be95058423643373720508af258 1082 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 606 714 2.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS17740 2b055be95058423643373720508af258 1082 SUPERFAMILY SSF55874 547 714 1.28E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS17740 2b055be95058423643373720508af258 1082 Gene3D G3DSA:1.10.287.130 501 554 3.9E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS17740 2b055be95058423643373720508af258 1082 Gene3D G3DSA:3.40.50.2300 851 975 1.2E-37 T 22-04-2016 JE55_RS17740 2b055be95058423643373720508af258 1082 PANTHER PTHR24423 840 965 1.5E-127 T 22-04-2016 JE55_RS17740 2b055be95058423643373720508af258 1082 PANTHER PTHR24423 17 25 1.5E-127 T 22-04-2016 JE55_RS17740 2b055be95058423643373720508af258 1082 PANTHER PTHR24423 362 719 1.5E-127 T 22-04-2016 JE55_RS17740 2b055be95058423643373720508af258 1082 PRINTS PR00344 Bacterial sensor protein C-terminal signature 700 713 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS17740 2b055be95058423643373720508af258 1082 PRINTS PR00344 Bacterial sensor protein C-terminal signature 641 655 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS17740 2b055be95058423643373720508af258 1082 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 694 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS17740 2b055be95058423643373720508af258 1082 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 669 4.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS17740 2b055be95058423643373720508af258 1082 Gene3D G3DSA:1.20.120.160 988 1058 3.6E-7 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 JE55_RS17740 2b055be95058423643373720508af258 1082 SUPERFAMILY SSF52172 852 969 6.69E-36 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS17740 2b055be95058423643373720508af258 1082 PANTHER PTHR24423:SF382 840 965 1.5E-127 T 22-04-2016 JE55_RS17740 2b055be95058423643373720508af258 1082 PANTHER PTHR24423:SF382 17 25 1.5E-127 T 22-04-2016 JE55_RS17740 2b055be95058423643373720508af258 1082 PANTHER PTHR24423:SF382 362 719 1.5E-127 T 22-04-2016 JE55_RS17740 2b055be95058423643373720508af258 1082 Pfam PF00512 His Kinase A (phospho-acceptor) domain 494 556 9.8E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS17740 2b055be95058423643373720508af258 1082 SMART SM00448 853 964 1.8E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS17740 2b055be95058423643373720508af258 1082 SUPERFAMILY SSF47384 484 559 1.49E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS17740 2b055be95058423643373720508af258 1082 SMART SM00387 605 716 7.3E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS17740 2b055be95058423643373720508af258 1082 Gene3D G3DSA:3.30.565.10 560 720 9.2E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS05520 1f347a686008c0a32793851eb5b59175 546 PIRSF PIRSF500060 8 528 8.6E-236 T 22-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria JE55_RS05520 1f347a686008c0a32793851eb5b59175 546 Gene3D G3DSA:3.20.20.70 48 489 3.3E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS05520 1f347a686008c0a32793851eb5b59175 546 PANTHER PTHR11938:SF50 152 501 2.5E-93 T 22-04-2016 JE55_RS05520 1f347a686008c0a32793851eb5b59175 546 SUPERFAMILY SSF51395 17 494 2.46E-136 T 22-04-2016 JE55_RS05520 1f347a686008c0a32793851eb5b59175 546 Pfam PF01645 Conserved region in glutamate synthase 154 470 5.4E-85 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 JE55_RS05520 1f347a686008c0a32793851eb5b59175 546 PIRSF PIRSF006429 3 508 1.6E-161 T 22-04-2016 IPR024188 Glutamate synthase large subunit-like protein JE55_RS05520 1f347a686008c0a32793851eb5b59175 546 PANTHER PTHR11938 152 501 2.5E-93 T 22-04-2016 JE55_RS08645 b4c5b845d259dc2bac411ac8897aed58 497 Gene3D G3DSA:3.30.450.90 105 234 1.3E-52 T 22-04-2016 JE55_RS08645 b4c5b845d259dc2bac411ac8897aed58 497 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 18 91 4.4E-5 T 22-04-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 JE55_RS08645 b4c5b845d259dc2bac411ac8897aed58 497 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 24 494 6.5E-232 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 JE55_RS08645 b4c5b845d259dc2bac411ac8897aed58 497 SUPERFAMILY SSF160246 24 87 6.8E-8 T 22-04-2016 JE55_RS08645 b4c5b845d259dc2bac411ac8897aed58 497 PANTHER PTHR30258 24 494 1.1E-217 T 22-04-2016 JE55_RS08645 b4c5b845d259dc2bac411ac8897aed58 497 SUPERFAMILY SSF52540 113 494 4.64E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08645 b4c5b845d259dc2bac411ac8897aed58 497 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 329 343 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 JE55_RS08645 b4c5b845d259dc2bac411ac8897aed58 497 Gene3D G3DSA:3.40.50.300 240 494 2.3E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08645 b4c5b845d259dc2bac411ac8897aed58 497 SMART SM00382 262 385 5.9E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS08645 b4c5b845d259dc2bac411ac8897aed58 497 PANTHER PTHR30258:SF9 24 494 1.1E-217 T 22-04-2016 JE55_RS08645 b4c5b845d259dc2bac411ac8897aed58 497 Pfam PF00437 Type II/IV secretion system protein 138 401 2.1E-83 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 JE55_RS14980 fff3b221ce33c089ea6865e75e6a2370 443 PANTHER PTHR10543 8 441 5.8E-106 T 22-04-2016 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 JE55_RS14980 fff3b221ce33c089ea6865e75e6a2370 443 Pfam PF03055 Retinal pigment epithelial membrane protein 12 439 1.9E-91 T 22-04-2016 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 JE55_RS15145 776cdc76b3175a8504545ed684bdb36a 495 ProSitePatterns PS00217 Sugar transport proteins signature 2. 147 172 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS15145 776cdc76b3175a8504545ed684bdb36a 495 Gene3D G3DSA:1.20.1250.20 263 453 6.4E-27 T 22-04-2016 JE55_RS15145 776cdc76b3175a8504545ed684bdb36a 495 Gene3D G3DSA:1.20.1250.20 35 245 8.5E-27 T 22-04-2016 JE55_RS15145 776cdc76b3175a8504545ed684bdb36a 495 PANTHER PTHR23508 25 470 6.6E-253 T 22-04-2016 JE55_RS15145 776cdc76b3175a8504545ed684bdb36a 495 Pfam PF00083 Sugar (and other) transporter 41 455 1.4E-42 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JE55_RS15145 776cdc76b3175a8504545ed684bdb36a 495 PANTHER PTHR23508:SF17 25 470 6.6E-253 T 22-04-2016 JE55_RS15145 776cdc76b3175a8504545ed684bdb36a 495 SUPERFAMILY SSF103473 35 451 3.27E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS15145 776cdc76b3175a8504545ed684bdb36a 495 ProSitePatterns PS00216 Sugar transport proteins signature 1. 322 338 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS17060 b730e6e3fe008e583964556f7c233571 268 Pfam PF06276 Ferric iron reductase FhuF-like transporter 82 217 5.3E-23 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain JE55_RS17060 b730e6e3fe008e583964556f7c233571 268 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 231 252 5.4E-7 T 22-04-2016 IPR024726 Ferric iron reductase, C-terminal GO:0051537 JE55_RS17060 b730e6e3fe008e583964556f7c233571 268 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 76 252 2.7E-57 T 22-04-2016 IPR008090 Ferric iron reductase JE55_RS05770 78b946a91b2364349997685394acd855 183 PANTHER PTHR38098 1 167 8.0E-16 T 22-04-2016 JE55_RS05770 78b946a91b2364349997685394acd855 183 Pfam PF04390 Lipopolysaccharide-assembly 12 155 3.5E-15 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 JE55_RS05770 78b946a91b2364349997685394acd855 183 Gene3D G3DSA:3.30.160.150 19 161 3.5E-37 T 22-04-2016 JE55_RS05770 78b946a91b2364349997685394acd855 183 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 160 22.813 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 JE55_RS05770 78b946a91b2364349997685394acd855 183 PANTHER PTHR38098:SF1 1 167 8.0E-16 T 22-04-2016 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 SUPERFAMILY SSF46557 3 77 1.15E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.328 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 PANTHER PTHR30437 1 157 4.9E-63 T 22-04-2016 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 Gene3D G3DSA:1.10.287.180 1 75 1.4E-34 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 1.4E-31 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 SUPERFAMILY SSF54534 83 157 4.71E-23 T 22-04-2016 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 Gene3D G3DSA:3.10.50.30 82 157 4.1E-30 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 3.4E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.4E-57 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JE55_RS15210 ab30d29efa4b692fdbe01d7dd84622a8 158 PIRSF PIRSF006092 1 157 3.9E-52 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 JE55_RS14315 7307276024eee673877c0a0593072f3d 163 PANTHER PTHR30239 1 161 2.8E-81 T 22-04-2016 JE55_RS14315 7307276024eee673877c0a0593072f3d 163 Pfam PF10369 Small subunit of acetolactate synthase 84 157 5.1E-27 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS14315 7307276024eee673877c0a0593072f3d 163 Gene3D G3DSA:3.30.70.260 1 78 2.2E-35 T 22-04-2016 JE55_RS14315 7307276024eee673877c0a0593072f3d 163 Gene3D G3DSA:3.30.70.1150 83 162 2.6E-29 T 22-04-2016 JE55_RS14315 7307276024eee673877c0a0593072f3d 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 1.0E-36 T 22-04-2016 JE55_RS14315 7307276024eee673877c0a0593072f3d 163 SUPERFAMILY SSF55021 1 76 3.23E-21 T 22-04-2016 JE55_RS14315 7307276024eee673877c0a0593072f3d 163 Pfam PF13710 ACT domain 12 73 2.9E-15 T 22-04-2016 JE55_RS14315 7307276024eee673877c0a0593072f3d 163 SUPERFAMILY SSF55021 79 162 6.87E-26 T 22-04-2016 JE55_RS14315 7307276024eee673877c0a0593072f3d 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 157 2.3E-62 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS08250 2f06160761d8657b7045580317338a51 567 SUPERFAMILY SSF52467 165 362 3.74E-37 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS08250 2f06160761d8657b7045580317338a51 567 PANTHER PTHR18968:SF120 1 541 3.1E-244 T 22-04-2016 JE55_RS08250 2f06160761d8657b7045580317338a51 567 SUPERFAMILY SSF52518 7 189 5.44E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS08250 2f06160761d8657b7045580317338a51 567 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 181 2.0E-52 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JE55_RS08250 2f06160761d8657b7045580317338a51 567 Gene3D G3DSA:3.40.50.970 373 552 2.0E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS08250 2f06160761d8657b7045580317338a51 567 SUPERFAMILY SSF52518 376 550 2.5E-58 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS08250 2f06160761d8657b7045580317338a51 567 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 JE55_RS08250 2f06160761d8657b7045580317338a51 567 Gene3D G3DSA:3.40.50.970 7 190 1.5E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS08250 2f06160761d8657b7045580317338a51 567 Gene3D G3DSA:3.40.50.1220 194 344 3.2E-38 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS08250 2f06160761d8657b7045580317338a51 567 PANTHER PTHR18968 1 541 3.1E-244 T 22-04-2016 JE55_RS08250 2f06160761d8657b7045580317338a51 567 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 541 2.1E-42 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JE55_RS08250 2f06160761d8657b7045580317338a51 567 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 338 5.8E-28 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JE55_RS07765 f5bf32deeef8617c2194872af56045b1 277 Pfam PF13276 HTH-like domain 37 91 6.6E-12 T 22-04-2016 IPR025948 HTH-like domain JE55_RS07765 f5bf32deeef8617c2194872af56045b1 277 PANTHER PTHR32552 1 259 1.6E-125 T 22-04-2016 JE55_RS07765 f5bf32deeef8617c2194872af56045b1 277 Pfam PF13683 Integrase core domain 190 256 9.7E-32 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 JE55_RS07765 f5bf32deeef8617c2194872af56045b1 277 SUPERFAMILY SSF53098 102 267 6.7E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS07765 f5bf32deeef8617c2194872af56045b1 277 PANTHER PTHR32552:SF35 1 259 1.6E-125 T 22-04-2016 JE55_RS07765 f5bf32deeef8617c2194872af56045b1 277 Gene3D G3DSA:3.30.420.10 103 256 2.3E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS06690 4a3eb9a8aa22b8c2f86fcf4900683d6d 718 SUPERFAMILY SSF55486 301 551 1.61E-60 T 22-04-2016 JE55_RS06690 4a3eb9a8aa22b8c2f86fcf4900683d6d 718 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 359 369 1.4E-20 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS06690 4a3eb9a8aa22b8c2f86fcf4900683d6d 718 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 411 423 1.4E-20 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS06690 4a3eb9a8aa22b8c2f86fcf4900683d6d 718 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 268 283 1.4E-20 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS06690 4a3eb9a8aa22b8c2f86fcf4900683d6d 718 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 220 235 1.4E-20 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS06690 4a3eb9a8aa22b8c2f86fcf4900683d6d 718 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 392 407 1.4E-20 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS06690 4a3eb9a8aa22b8c2f86fcf4900683d6d 718 SUPERFAMILY SSF63737 63 282 9.42E-35 T 22-04-2016 JE55_RS06690 4a3eb9a8aa22b8c2f86fcf4900683d6d 718 Gene3D G3DSA:1.10.390.10 405 552 2.1E-34 T 22-04-2016 JE55_RS06690 4a3eb9a8aa22b8c2f86fcf4900683d6d 718 Pfam PF01433 Peptidase family M1 67 466 2.4E-66 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS06690 4a3eb9a8aa22b8c2f86fcf4900683d6d 718 PANTHER PTHR11533 68 164 3.6E-103 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 JE55_RS06690 4a3eb9a8aa22b8c2f86fcf4900683d6d 718 PANTHER PTHR11533 185 643 3.6E-103 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 JE55_RS13250 6666b7b9eb953d00cfb858727e2344cb 291 PANTHER PTHR33969:SF2 42 286 5.8E-74 T 22-04-2016 JE55_RS13250 6666b7b9eb953d00cfb858727e2344cb 291 PANTHER PTHR33969 42 286 5.8E-74 T 22-04-2016 JE55_RS13250 6666b7b9eb953d00cfb858727e2344cb 291 Hamap MF_01805 Segregation and condensation protein A [scpA]. 58 288 21.293 T 22-04-2016 IPR003768 Segregation and condensation protein A JE55_RS13250 6666b7b9eb953d00cfb858727e2344cb 291 Pfam PF02616 Segregation and condensation protein ScpA 75 286 5.8E-32 T 22-04-2016 IPR003768 Segregation and condensation protein A JE55_RS11905 f804f4aeb632ecfdc4e9f35c1e25534e 481 Gene3D G3DSA:3.40.50.2300 44 169 2.2E-35 T 22-04-2016 JE55_RS11905 f804f4aeb632ecfdc4e9f35c1e25534e 481 Pfam PF00072 Response regulator receiver domain 44 154 3.7E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS11905 f804f4aeb632ecfdc4e9f35c1e25534e 481 PANTHER PTHR26402 42 396 2.1E-38 T 22-04-2016 JE55_RS11905 f804f4aeb632ecfdc4e9f35c1e25534e 481 Pfam PF13487 HD domain 288 349 1.5E-19 T 22-04-2016 JE55_RS11905 f804f4aeb632ecfdc4e9f35c1e25534e 481 SMART SM00448 42 154 3.8E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS11905 f804f4aeb632ecfdc4e9f35c1e25534e 481 SUPERFAMILY SSF52172 44 208 1.04E-36 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS11905 f804f4aeb632ecfdc4e9f35c1e25534e 481 PANTHER PTHR26402:SF515 42 396 2.1E-38 T 22-04-2016 JE55_RS11905 f804f4aeb632ecfdc4e9f35c1e25534e 481 Gene3D G3DSA:1.10.3210.10 239 399 1.4E-8 T 22-04-2016 IPR006674 HD domain JE55_RS11905 f804f4aeb632ecfdc4e9f35c1e25534e 481 SUPERFAMILY SSF109604 239 399 9.14E-11 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 375 5.3E-149 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 SUPERFAMILY SSF53067 197 375 1.09E-49 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 PANTHER PTHR32432:SF4 1 384 2.3E-155 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 Gene3D G3DSA:3.90.640.10 234 296 1.9E-18 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 Gene3D G3DSA:3.30.420.40 209 233 8.0E-34 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 Gene3D G3DSA:3.30.420.40 297 351 8.0E-34 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 Gene3D G3DSA:3.30.1490.110 85 156 3.0E-18 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 Hamap MF_02033 Cell division protein FtsA [ftsA]. 5 410 31.671 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 SMART SM00842 9 195 1.1E-104 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 PANTHER PTHR32432 1 384 2.3E-155 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 Pfam PF14450 Cell division protein FtsA 206 373 4.3E-25 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 Pfam PF14450 Cell division protein FtsA 10 193 2.7E-12 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 Pfam PF02491 SHS2 domain inserted in FTSA 84 161 1.0E-32 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 SUPERFAMILY SSF53067 7 196 2.02E-62 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 Gene3D G3DSA:3.30.420.40 157 208 1.2E-25 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 Gene3D G3DSA:3.30.420.40 3 82 1.2E-25 T 22-04-2016 JE55_RS06280 eb2db751c5ba1446202dec370abb9b36 410 PIRSF PIRSF003101 1 410 6.8E-152 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 Pfam PF08676 MutL C terminal dimerisation domain 490 637 7.3E-46 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 120 126 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 SUPERFAMILY SSF55874 30 228 2.23E-51 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 SUPERFAMILY SSF118116 490 679 3.4E-57 T 22-04-2016 JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 51 152 8.8E-11 T 22-04-2016 JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 SMART SM00853 494 637 2.1E-51 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 Gene3D G3DSA:3.30.565.10 29 222 1.1E-68 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 28 677 27.641 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 SMART SM01340 231 349 1.2E-56 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 SUPERFAMILY SSF54211 214 349 1.74E-35 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 29 329 4.1E-89 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 PANTHER PTHR10073 30 677 4.3E-147 T 22-04-2016 JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 232 348 5.5E-37 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 JE55_RS05115 2e0957102f063c83a2e7efc63e6c752c 681 Gene3D G3DSA:3.30.230.10 223 348 1.7E-36 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 PANTHER PTHR23152 4 953 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 49 7.0E-18 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 Pfam PF02779 Transketolase, pyrimidine binding domain 599 798 1.1E-65 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 Pfam PF00676 Dehydrogenase E1 component 221 524 5.9E-49 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 Gene3D G3DSA:3.40.50.970 606 801 7.4E-22 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 802 944 1.9E-51 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 SMART SM00861 600 797 3.4E-62 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 SUPERFAMILY SSF52518 126 552 2.0E-89 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 SUPERFAMILY SSF52518 583 804 8.51E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 PANTHER PTHR23152:SF4 4 953 0.0 T 22-04-2016 JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 PIRSF PIRSF000157 1 946 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 943 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 JE55_RS16365 c66878b024f0b0cf9a0dbca2cc083102 954 Gene3D G3DSA:3.40.50.970 167 523 5.6E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS00865 334703b211b2e9e2823f4f9ca5122ea8 182 SUPERFAMILY SSF52833 18 181 4.26E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS00865 334703b211b2e9e2823f4f9ca5122ea8 182 Gene3D G3DSA:3.40.30.10 3 181 1.3E-51 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS00865 334703b211b2e9e2823f4f9ca5122ea8 182 PANTHER PTHR10681:SF87 11 182 2.3E-72 T 22-04-2016 JE55_RS00865 334703b211b2e9e2823f4f9ca5122ea8 182 PIRSF PIRSF000239 1 182 4.0E-39 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 JE55_RS00865 334703b211b2e9e2823f4f9ca5122ea8 182 Pfam PF00578 AhpC/TSA family 5 143 1.1E-26 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS00865 334703b211b2e9e2823f4f9ca5122ea8 182 PANTHER PTHR10681 11 182 2.3E-72 T 22-04-2016 JE55_RS07420 ab007de56b95c846d39b83998de4836e 406 Pfam PF01610 Transposase 157 397 6.0E-66 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JE55_RS07420 ab007de56b95c846d39b83998de4836e 406 PANTHER PTHR33498 39 393 1.1E-46 T 22-04-2016 JE55_RS07420 ab007de56b95c846d39b83998de4836e 406 PANTHER PTHR33498:SF1 39 393 1.1E-46 T 22-04-2016 JE55_RS07420 ab007de56b95c846d39b83998de4836e 406 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 139 1.8E-11 T 22-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain JE55_RS07420 ab007de56b95c846d39b83998de4836e 406 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 44 86 1.6E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 Gene3D G3DSA:3.90.1380.10 1 84 4.4E-30 T 22-04-2016 IPR029144 Threonine synthase, N-terminal JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 Gene3D G3DSA:3.40.50.1100 218 454 4.2E-91 T 22-04-2016 JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 PANTHER PTHR10314 55 347 2.8E-120 T 22-04-2016 JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 PANTHER PTHR10314 381 481 2.8E-120 T 22-04-2016 JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 PANTHER PTHR10314 27 38 2.8E-120 T 22-04-2016 JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 PANTHER PTHR10314:SF1 55 347 2.8E-120 T 22-04-2016 JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 PANTHER PTHR10314:SF1 381 481 2.8E-120 T 22-04-2016 JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 PANTHER PTHR10314:SF1 27 38 2.8E-120 T 22-04-2016 JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 116 130 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 Gene3D G3DSA:3.40.50.1100 125 217 8.4E-7 T 22-04-2016 JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 TIGRFAM TIGR00260 thrC: threonine synthase 112 445 2.1E-65 T 22-04-2016 IPR004450 Threonine synthase-like JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 99 351 8.0E-12 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 SUPERFAMILY SSF53686 1 481 1.73E-148 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS00335 ab66f04c119829137e69faa4e9af277d 483 Pfam PF14821 Threonine synthase N terminus 2 81 1.1E-27 T 22-04-2016 IPR029144 Threonine synthase, N-terminal JE55_RS16045 24fd7899202f409cb0ad278877ac9022 323 SUPERFAMILY SSF56300 2 112 5.7E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS16045 24fd7899202f409cb0ad278877ac9022 323 SUPERFAMILY SSF56300 217 307 5.7E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS16045 24fd7899202f409cb0ad278877ac9022 323 PANTHER PTHR37844 1 145 7.5E-25 T 22-04-2016 JE55_RS16045 24fd7899202f409cb0ad278877ac9022 323 PANTHER PTHR37844 208 322 7.5E-25 T 22-04-2016 JE55_RS16045 24fd7899202f409cb0ad278877ac9022 323 Gene3D G3DSA:3.60.21.10 2 123 1.3E-19 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS16045 24fd7899202f409cb0ad278877ac9022 323 Gene3D G3DSA:3.60.21.10 218 310 1.3E-19 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS16045 24fd7899202f409cb0ad278877ac9022 323 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 80 3.4E-6 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type JE55_RS12975 b0ef84064bc78b952a44720dd10b521d 152 PANTHER PTHR23091 5 143 2.6E-26 T 22-04-2016 JE55_RS12975 b0ef84064bc78b952a44720dd10b521d 152 SUPERFAMILY SSF55729 3 143 2.57E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS12975 b0ef84064bc78b952a44720dd10b521d 152 Gene3D G3DSA:3.40.630.30 6 143 1.1E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS12975 b0ef84064bc78b952a44720dd10b521d 152 Pfam PF00583 Acetyltransferase (GNAT) family 64 138 3.7E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS02020 7244b0147b35e768c793ec762f56cffd 205 SUPERFAMILY SSF53335 21 183 1.59E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS02020 7244b0147b35e768c793ec762f56cffd 205 Gene3D G3DSA:3.40.50.150 22 181 1.3E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS03145 ef7b4a877c1aa717e2b9029ee61bda17 350 Pfam PF17188 MucB/RseB C-terminal domain 245 345 6.6E-27 T 22-04-2016 IPR033436 MucB/RseB, C-terminal JE55_RS03145 ef7b4a877c1aa717e2b9029ee61bda17 350 Gene3D G3DSA:2.50.20.10 47 210 7.7E-12 T 22-04-2016 JE55_RS03145 ef7b4a877c1aa717e2b9029ee61bda17 350 Pfam PF03888 MucB/RseB N-terminal domain 47 220 2.9E-64 T 22-04-2016 IPR033434 MucB/RseB, N-terminal JE55_RS03145 ef7b4a877c1aa717e2b9029ee61bda17 350 PANTHER PTHR38782:SF1 16 350 3.1E-49 T 22-04-2016 JE55_RS03145 ef7b4a877c1aa717e2b9029ee61bda17 350 PIRSF PIRSF005427 13 350 4.2E-96 T 22-04-2016 IPR005588 MucB/RseB JE55_RS03145 ef7b4a877c1aa717e2b9029ee61bda17 350 PANTHER PTHR38782 16 350 3.1E-49 T 22-04-2016 JE55_RS06670 4a812b1758252970239d73d1e38c4c2f 378 Pfam PF05175 Methyltransferase small domain 173 316 9.9E-10 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 JE55_RS06670 4a812b1758252970239d73d1e38c4c2f 378 PANTHER PTHR18895 204 315 1.6E-17 T 22-04-2016 JE55_RS06670 4a812b1758252970239d73d1e38c4c2f 378 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 266 272 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JE55_RS06670 4a812b1758252970239d73d1e38c4c2f 378 SUPERFAMILY SSF53335 168 316 7.15E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS06670 4a812b1758252970239d73d1e38c4c2f 378 Gene3D G3DSA:3.40.50.150 159 332 3.3E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS01375 882b164fa9893248ef627f45963de655 530 Gene3D G3DSA:3.20.20.360 73 409 2.0E-116 T 22-04-2016 JE55_RS01375 882b164fa9893248ef627f45963de655 530 PIRSF PIRSF001363 2 530 2.9E-254 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 JE55_RS01375 882b164fa9893248ef627f45963de655 530 Gene3D G3DSA:1.20.1220.12 413 524 1.5E-31 T 22-04-2016 JE55_RS01375 882b164fa9893248ef627f45963de655 530 PANTHER PTHR21631:SF1 1 530 2.2E-272 T 22-04-2016 JE55_RS01375 882b164fa9893248ef627f45963de655 530 Pfam PF01274 Malate synthase 12 530 2.4E-202 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 JE55_RS01375 882b164fa9893248ef627f45963de655 530 PANTHER PTHR21631 1 530 2.2E-272 T 22-04-2016 JE55_RS01375 882b164fa9893248ef627f45963de655 530 SUPERFAMILY SSF51645 7 530 8.5E-192 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 JE55_RS01375 882b164fa9893248ef627f45963de655 530 ProSitePatterns PS00510 Malate synthase signature. 265 280 - T 22-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 JE55_RS01375 882b164fa9893248ef627f45963de655 530 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 24 530 3.1E-234 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 JE55_RS22855 1fcfa9fff5bab208b1ac842b437d740c 172 SUPERFAMILY SSF51735 35 172 4.13E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS22855 1fcfa9fff5bab208b1ac842b437d740c 172 Pfam PF08659 KR domain 35 172 9.6E-44 T 22-04-2016 IPR013968 Polyketide synthase, ketoreductase domain JE55_RS22855 1fcfa9fff5bab208b1ac842b437d740c 172 PANTHER PTHR11712 1 172 8.8E-46 T 22-04-2016 JE55_RS22855 1fcfa9fff5bab208b1ac842b437d740c 172 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 35 171 4.5E-9 T 22-04-2016 JE55_RS22855 1fcfa9fff5bab208b1ac842b437d740c 172 Gene3D G3DSA:3.40.50.720 36 171 1.7E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS15920 215e4b13caabbe582ab7831bafd77e71 266 Gene3D G3DSA:3.40.50.300 8 247 1.9E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15920 215e4b13caabbe582ab7831bafd77e71 266 SMART SM00382 35 237 5.7E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS15920 215e4b13caabbe582ab7831bafd77e71 266 PANTHER PTHR24220 12 262 7.7E-102 T 22-04-2016 JE55_RS15920 215e4b13caabbe582ab7831bafd77e71 266 Pfam PF00005 ABC transporter 26 181 9.7E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS15920 215e4b13caabbe582ab7831bafd77e71 266 SUPERFAMILY SSF52540 9 242 4.18E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15920 215e4b13caabbe582ab7831bafd77e71 266 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS15920 215e4b13caabbe582ab7831bafd77e71 266 PANTHER PTHR24220:SF520 12 262 7.7E-102 T 22-04-2016 JE55_RS13640 1005932b5774cf008650a265e0ee2e2a 60 PRINTS PR00163 Rubredoxin signature 9 25 3.4E-7 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 JE55_RS13640 1005932b5774cf008650a265e0ee2e2a 60 PRINTS PR00163 Rubredoxin signature 39 55 3.4E-7 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 JE55_RS13640 1005932b5774cf008650a265e0ee2e2a 60 Pfam PF00301 Rubredoxin 10 55 1.5E-21 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 JE55_RS13640 1005932b5774cf008650a265e0ee2e2a 60 ProSitePatterns PS00202 Rubredoxin signature. 39 49 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 JE55_RS13640 1005932b5774cf008650a265e0ee2e2a 60 Gene3D G3DSA:2.20.28.10 4 59 1.6E-24 T 22-04-2016 IPR004039 Rubredoxin-type fold JE55_RS13640 1005932b5774cf008650a265e0ee2e2a 60 SUPERFAMILY SSF57802 5 59 5.72E-22 T 22-04-2016 JE55_RS10560 ca3bb1122e27ee909904f28795c4f7f0 300 PANTHER PTHR30537 1 292 5.1E-72 T 22-04-2016 JE55_RS10560 ca3bb1122e27ee909904f28795c4f7f0 300 SUPERFAMILY SSF46785 1 110 3.96E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10560 ca3bb1122e27ee909904f28795c4f7f0 300 Gene3D G3DSA:3.40.190.10 268 295 9.9E-9 T 22-04-2016 JE55_RS10560 ca3bb1122e27ee909904f28795c4f7f0 300 Gene3D G3DSA:3.40.190.10 88 161 9.9E-9 T 22-04-2016 JE55_RS10560 ca3bb1122e27ee909904f28795c4f7f0 300 SUPERFAMILY SSF53850 87 296 3.26E-40 T 22-04-2016 JE55_RS10560 ca3bb1122e27ee909904f28795c4f7f0 300 PANTHER PTHR30537:SF5 1 292 5.1E-72 T 22-04-2016 JE55_RS10560 ca3bb1122e27ee909904f28795c4f7f0 300 Gene3D G3DSA:1.10.10.10 1 85 3.5E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10560 ca3bb1122e27ee909904f28795c4f7f0 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.5E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS10560 ca3bb1122e27ee909904f28795c4f7f0 300 Gene3D G3DSA:3.40.190.10 162 257 5.7E-17 T 22-04-2016 JE55_RS10560 ca3bb1122e27ee909904f28795c4f7f0 300 Pfam PF03466 LysR substrate binding domain 87 293 2.0E-36 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 SUPERFAMILY SSF53244 357 495 5.19E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 SUPERFAMILY SSF53623 121 266 9.16E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 SUPERFAMILY SSF53623 298 355 9.16E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 Gene3D G3DSA:3.40.1190.10 103 264 5.4E-73 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 Gene3D G3DSA:3.40.1190.10 296 357 5.4E-73 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 Gene3D G3DSA:3.90.190.20 359 493 7.8E-48 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 Gene3D G3DSA:3.40.50.720 7 102 6.4E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 10 494 1.9E-110 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 Pfam PF02875 Mur ligase family, glutamate ligase domain 359 419 6.8E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 8 496 32.788 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 Pfam PF08245 Mur ligase middle domain 127 338 2.9E-27 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 PANTHER PTHR23135:SF2 1 500 2.4E-133 T 22-04-2016 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 SUPERFAMILY SSF51984 5 103 1.57E-13 T 22-04-2016 JE55_RS06310 360aaaa1fc039c06a1e1e15178d4c4a3 504 PANTHER PTHR23135 1 500 2.4E-133 T 22-04-2016 JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 TIGRFAM TIGR01380 glut_syn: glutathione synthase 1 316 6.6E-123 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 1 124 4.4E-42 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 PANTHER PTHR21621 1 47 6.5E-118 T 22-04-2016 JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 PANTHER PTHR21621 64 315 6.5E-118 T 22-04-2016 JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 Hamap MF_00162 Glutathione synthetase [gshB]. 1 318 162.54 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 PANTHER PTHR21621:SF4 1 47 6.5E-118 T 22-04-2016 JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 PANTHER PTHR21621:SF4 64 315 6.5E-118 T 22-04-2016 JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 SUPERFAMILY SSF52440 1 126 9.78E-39 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 Gene3D G3DSA:3.40.50.20 1 132 1.3E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 SUPERFAMILY SSF56059 128 315 2.91E-57 T 22-04-2016 JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 128 301 1.1E-72 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 Gene3D G3DSA:3.30.1490.20 141 195 2.3E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS10660 bacdce8c0a3eba546af3691256eaf378 318 Gene3D G3DSA:3.30.470.20 196 304 1.2E-46 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.3E-70 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.729 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 Pfam PF00164 Ribosomal protein S12/S23 3 123 1.1E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 PIRSF PIRSF002133 1 124 1.5E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 PRINTS PR01034 Ribosomal protein S12 signature 110 122 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 PRINTS PR01034 Ribosomal protein S12 signature 77 94 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 PRINTS PR01034 Ribosomal protein S12 signature 58 77 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 PRINTS PR01034 Ribosomal protein S12 signature 42 57 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 PRINTS PR01034 Ribosomal protein S12 signature 94 110 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 PRINTS PR01034 Ribosomal protein S12 signature 27 42 1.4E-59 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 SUPERFAMILY SSF50249 2 123 1.03E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 Gene3D G3DSA:2.40.50.140 1 123 2.9E-66 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07410 bb41339aff0bfe75dffe1738bda2feba 126 PANTHER PTHR11652 1 116 3.1E-76 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS12895 65a17d85b9a7cb1519b635c08de4d7fb 398 PANTHER PTHR11351:SF33 15 384 4.2E-141 T 22-04-2016 JE55_RS12895 65a17d85b9a7cb1519b635c08de4d7fb 398 Pfam PF00487 Fatty acid desaturase 18 221 5.4E-13 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 JE55_RS12895 65a17d85b9a7cb1519b635c08de4d7fb 398 Pfam PF01610 Transposase 278 397 1.5E-10 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JE55_RS12895 65a17d85b9a7cb1519b635c08de4d7fb 398 PANTHER PTHR11351 15 384 4.2E-141 T 22-04-2016 JE55_RS12895 65a17d85b9a7cb1519b635c08de4d7fb 398 PRINTS PR00075 Fatty acid desaturase family 1 signature 78 107 1.5E-5 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 JE55_RS12895 65a17d85b9a7cb1519b635c08de4d7fb 398 PRINTS PR00075 Fatty acid desaturase family 1 signature 166 187 1.5E-5 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 JE55_RS12895 65a17d85b9a7cb1519b635c08de4d7fb 398 PRINTS PR00075 Fatty acid desaturase family 1 signature 18 40 1.5E-5 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 JE55_RS12895 65a17d85b9a7cb1519b635c08de4d7fb 398 PRINTS PR00075 Fatty acid desaturase family 1 signature 41 61 1.5E-5 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 JE55_RS12895 65a17d85b9a7cb1519b635c08de4d7fb 398 PRINTS PR00075 Fatty acid desaturase family 1 signature 209 223 1.5E-5 T 22-04-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 SUPERFAMILY SSF47789 248 320 5.23E-27 T 22-04-2016 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 313 4.8E-106 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 PANTHER PTHR32108:SF0 6 325 2.8E-137 T 22-04-2016 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 PANTHER PTHR32108 6 325 2.8E-137 T 22-04-2016 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 Gene3D G3DSA:1.10.150.20 244 321 1.8E-36 T 22-04-2016 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 SMART SM00662 20 230 1.3E-93 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 SUPERFAMILY SSF56553 50 174 5.23E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 SUPERFAMILY SSF55257 175 228 1.77E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 SUPERFAMILY SSF55257 5 50 1.77E-31 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 248 305 7.8E-25 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 323 6.0E-35 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 150 1.5E-23 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 Gene3D G3DSA:2.170.120.12 63 173 4.9E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 Gene3D G3DSA:3.30.1360.10 5 62 5.0E-11 T 22-04-2016 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 Gene3D G3DSA:3.30.1360.10 176 227 3.3E-7 T 22-04-2016 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 2 314 35.125 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07255 b087bb3f8c35bec80793ee894ff8cee9 325 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 224 6.8E-22 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS28595 670492f9dceec368a83fca522c1f1245 371 SUPERFAMILY SSF53474 63 198 1.15E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS28595 670492f9dceec368a83fca522c1f1245 371 SUPERFAMILY SSF53474 277 349 1.15E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS28595 670492f9dceec368a83fca522c1f1245 371 Gene3D G3DSA:3.40.50.1820 277 307 5.9E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS28595 670492f9dceec368a83fca522c1f1245 371 Gene3D G3DSA:3.40.50.1820 62 199 5.9E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS12745 3843923e946213f509c6e04f10b997e3 201 Gene3D G3DSA:3.40.50.150 39 190 7.1E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS12745 3843923e946213f509c6e04f10b997e3 201 Pfam PF13649 Methyltransferase domain 44 133 1.5E-11 T 22-04-2016 JE55_RS12745 3843923e946213f509c6e04f10b997e3 201 SUPERFAMILY SSF53335 19 179 7.5E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS16015 12848c00bc90dbd786bd3ef849db4641 293 SUPERFAMILY SSF111369 41 204 1.44E-24 T 22-04-2016 JE55_RS16015 12848c00bc90dbd786bd3ef849db4641 293 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 228 5.4E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JE55_RS16015 12848c00bc90dbd786bd3ef849db4641 293 PANTHER PTHR30367:SF5 9 285 2.6E-131 T 22-04-2016 JE55_RS16015 12848c00bc90dbd786bd3ef849db4641 293 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 228 4.6E-33 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 JE55_RS16015 12848c00bc90dbd786bd3ef849db4641 293 PANTHER PTHR30367 9 285 2.6E-131 T 22-04-2016 JE55_RS16015 12848c00bc90dbd786bd3ef849db4641 293 Gene3D G3DSA:2.40.50.100 45 78 4.0E-19 T 22-04-2016 JE55_RS16015 12848c00bc90dbd786bd3ef849db4641 293 Gene3D G3DSA:2.40.50.100 152 185 4.0E-19 T 22-04-2016 JE55_RS13700 b375e2fbfc146bd8fe872e8b2a7d17c8 341 Pfam PF00850 Histone deacetylase domain 51 332 1.1E-66 T 22-04-2016 IPR023801 Histone deacetylase domain JE55_RS13700 b375e2fbfc146bd8fe872e8b2a7d17c8 341 SUPERFAMILY SSF52768 2 336 1.77E-87 T 22-04-2016 JE55_RS13700 b375e2fbfc146bd8fe872e8b2a7d17c8 341 PRINTS PR01270 Histone deacetylase superfamily signature 271 281 1.2E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS13700 b375e2fbfc146bd8fe872e8b2a7d17c8 341 PRINTS PR01270 Histone deacetylase superfamily signature 185 200 1.2E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS13700 b375e2fbfc146bd8fe872e8b2a7d17c8 341 PRINTS PR01270 Histone deacetylase superfamily signature 153 176 1.2E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS13700 b375e2fbfc146bd8fe872e8b2a7d17c8 341 PANTHER PTHR10625:SF121 111 329 1.5E-71 T 22-04-2016 JE55_RS13700 b375e2fbfc146bd8fe872e8b2a7d17c8 341 PANTHER PTHR10625:SF121 22 88 1.5E-71 T 22-04-2016 JE55_RS13700 b375e2fbfc146bd8fe872e8b2a7d17c8 341 Gene3D G3DSA:3.40.800.20 4 332 2.3E-77 T 22-04-2016 IPR023801 Histone deacetylase domain JE55_RS13700 b375e2fbfc146bd8fe872e8b2a7d17c8 341 PANTHER PTHR10625 111 329 1.5E-71 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS13700 b375e2fbfc146bd8fe872e8b2a7d17c8 341 PANTHER PTHR10625 22 88 1.5E-71 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS03825 39257e033e55c93bc3834ee5c1fae69b 381 PANTHER PTHR30231 9 162 2.1E-44 T 22-04-2016 JE55_RS03825 39257e033e55c93bc3834ee5c1fae69b 381 SMART SM00479 14 178 1.4E-41 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III JE55_RS03825 39257e033e55c93bc3834ee5c1fae69b 381 SUPERFAMILY SSF82771 210 286 2.35E-5 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily JE55_RS03825 39257e033e55c93bc3834ee5c1fae69b 381 Pfam PF00929 Exonuclease 17 163 9.8E-30 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III JE55_RS03825 39257e033e55c93bc3834ee5c1fae69b 381 Gene3D G3DSA:3.30.420.10 11 177 4.6E-51 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS03825 39257e033e55c93bc3834ee5c1fae69b 381 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 18 171 1.6E-26 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS03825 39257e033e55c93bc3834ee5c1fae69b 381 SUPERFAMILY SSF53098 10 174 1.05E-52 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS06975 a6d9a1d8dbce1e0a77d2884fda4cb035 257 SUPERFAMILY SSF51366 3 256 1.26E-84 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 JE55_RS06975 a6d9a1d8dbce1e0a77d2884fda4cb035 257 Pfam PF00977 Histidine biosynthesis protein 6 239 5.3E-91 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 JE55_RS06975 a6d9a1d8dbce1e0a77d2884fda4cb035 257 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 256 3.4E-114 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 JE55_RS06975 a6d9a1d8dbce1e0a77d2884fda4cb035 257 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 256 49.219 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 JE55_RS06975 a6d9a1d8dbce1e0a77d2884fda4cb035 257 Gene3D G3DSA:3.20.20.70 5 257 5.9E-108 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS06975 a6d9a1d8dbce1e0a77d2884fda4cb035 257 PANTHER PTHR21235 3 257 1.8E-126 T 22-04-2016 JE55_RS06975 a6d9a1d8dbce1e0a77d2884fda4cb035 257 PANTHER PTHR21235:SF2 3 257 1.8E-126 T 22-04-2016 JE55_RS16505 efcfe0cc93d5dd65d9d6419f8f9c0878 318 Gene3D G3DSA:1.10.357.10 6 215 5.4E-41 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS16505 efcfe0cc93d5dd65d9d6419f8f9c0878 318 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 6.8E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS16505 efcfe0cc93d5dd65d9d6419f8f9c0878 318 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 60 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JE55_RS16505 efcfe0cc93d5dd65d9d6419f8f9c0878 318 SUPERFAMILY SSF48498 88 219 4.45E-39 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS16505 efcfe0cc93d5dd65d9d6419f8f9c0878 318 SUPERFAMILY SSF46689 4 82 2.46E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS16505 efcfe0cc93d5dd65d9d6419f8f9c0878 318 PANTHER PTHR30055 1 174 8.9E-31 T 22-04-2016 JE55_RS16505 efcfe0cc93d5dd65d9d6419f8f9c0878 318 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 4.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS16505 efcfe0cc93d5dd65d9d6419f8f9c0878 318 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 4.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS16505 efcfe0cc93d5dd65d9d6419f8f9c0878 318 PANTHER PTHR30055:SF73 1 174 8.9E-31 T 22-04-2016 JE55_RS05255 79b8bbdee367b3b0d0b24f07a222c6b0 469 SUPERFAMILY SSF56176 10 224 6.07E-69 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS05255 79b8bbdee367b3b0d0b24f07a222c6b0 469 PANTHER PTHR11748 14 468 1.0E-222 T 22-04-2016 JE55_RS05255 79b8bbdee367b3b0d0b24f07a222c6b0 469 Gene3D G3DSA:3.30.43.10 6 105 2.7E-27 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 JE55_RS05255 79b8bbdee367b3b0d0b24f07a222c6b0 469 Gene3D G3DSA:1.10.45.10 425 464 2.2E-16 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JE55_RS05255 79b8bbdee367b3b0d0b24f07a222c6b0 469 Pfam PF02913 FAD linked oxidases, C-terminal domain 224 464 1.7E-63 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 JE55_RS05255 79b8bbdee367b3b0d0b24f07a222c6b0 469 SUPERFAMILY SSF55103 197 465 3.6E-73 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JE55_RS05255 79b8bbdee367b3b0d0b24f07a222c6b0 469 PANTHER PTHR11748:SF97 14 468 1.0E-222 T 22-04-2016 JE55_RS05255 79b8bbdee367b3b0d0b24f07a222c6b0 469 Gene3D G3DSA:3.30.465.10 106 224 3.8E-48 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 JE55_RS05255 79b8bbdee367b3b0d0b24f07a222c6b0 469 Pfam PF01565 FAD binding domain 50 187 1.6E-37 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JE55_RS13355 ac80389fdfa3bbfb1ef67d16a7977a5b 493 PANTHER PTHR33408 3 489 1.8E-32 T 22-04-2016 JE55_RS13355 ac80389fdfa3bbfb1ef67d16a7977a5b 493 Pfam PF05598 Transposase domain (DUF772) 58 134 2.2E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal JE55_RS13355 ac80389fdfa3bbfb1ef67d16a7977a5b 493 Pfam PF13751 Transposase DDE domain 331 449 3.3E-28 T 22-04-2016 IPR025668 Transposase DDE domain JE55_RS07040 262bdb1f15a7153cdb1e4c9e3c995140 210 Gene3D G3DSA:3.10.450.50 117 171 2.2E-33 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS07040 262bdb1f15a7153cdb1e4c9e3c995140 210 Gene3D G3DSA:3.10.450.50 29 72 2.2E-33 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS07040 262bdb1f15a7153cdb1e4c9e3c995140 210 Pfam PF05494 MlaC protein 36 197 3.5E-52 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC JE55_RS07040 262bdb1f15a7153cdb1e4c9e3c995140 210 Gene3D G3DSA:1.10.10.640 172 207 1.6E-33 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical JE55_RS07040 262bdb1f15a7153cdb1e4c9e3c995140 210 Gene3D G3DSA:1.10.10.640 73 113 1.6E-33 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical JE55_RS07040 262bdb1f15a7153cdb1e4c9e3c995140 210 PANTHER PTHR36573 3 210 1.5E-32 T 22-04-2016 JE55_RS07040 262bdb1f15a7153cdb1e4c9e3c995140 210 PIRSF PIRSF004649 1 210 3.7E-45 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC JE55_RS15500 51b912f1262e048302d1a395a46675dc 474 Gene3D G3DSA:3.20.20.80 83 311 2.8E-9 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15500 51b912f1262e048302d1a395a46675dc 474 SUPERFAMILY SSF51445 80 354 3.71E-27 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15500 51b912f1262e048302d1a395a46675dc 474 PANTHER PTHR36183 92 474 2.9E-21 T 22-04-2016 JE55_RS15500 51b912f1262e048302d1a395a46675dc 474 Pfam PF12891 Glycoside hydrolase family 44 164 230 6.1E-6 T 22-04-2016 IPR024745 Glycoside hydrolase, family 44 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 JE55_RS09515 6d3aa5eab17a6ca5893a12b9bcbaf22e 559 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 183 282 2.0E-17 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS09515 6d3aa5eab17a6ca5893a12b9bcbaf22e 559 SUPERFAMILY SSF47203 298 453 1.58E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS09515 6d3aa5eab17a6ca5893a12b9bcbaf22e 559 Gene3D G3DSA:1.20.140.10 281 455 1.4E-39 T 22-04-2016 JE55_RS09515 6d3aa5eab17a6ca5893a12b9bcbaf22e 559 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 293 450 3.9E-34 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS09515 6d3aa5eab17a6ca5893a12b9bcbaf22e 559 PANTHER PTHR10909:SF289 1 470 2.3E-182 T 22-04-2016 JE55_RS09515 6d3aa5eab17a6ca5893a12b9bcbaf22e 559 SUPERFAMILY SSF56645 54 300 2.96E-34 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS09515 6d3aa5eab17a6ca5893a12b9bcbaf22e 559 PANTHER PTHR10909 1 470 2.3E-182 T 22-04-2016 JE55_RS09515 6d3aa5eab17a6ca5893a12b9bcbaf22e 559 Gene3D G3DSA:2.40.110.10 183 280 1.7E-20 T 22-04-2016 JE55_RS00225 5348fe54d16ef6050501bbc9fb027e24 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 97.494 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 JE55_RS00225 5348fe54d16ef6050501bbc9fb027e24 198 SUPERFAMILY SSF111304 4 198 7.19E-73 T 22-04-2016 IPR023627 Recombination protein RecR JE55_RS00225 5348fe54d16ef6050501bbc9fb027e24 198 Pfam PF13662 Toprim domain 82 171 7.1E-24 T 22-04-2016 IPR006171 Toprim domain JE55_RS00225 5348fe54d16ef6050501bbc9fb027e24 198 PANTHER PTHR30446:SF0 1 198 3.7E-96 T 22-04-2016 JE55_RS00225 5348fe54d16ef6050501bbc9fb027e24 198 TIGRFAM TIGR00615 recR: recombination protein RecR 5 196 3.3E-70 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 JE55_RS00225 5348fe54d16ef6050501bbc9fb027e24 198 Pfam PF02132 RecR protein 40 78 1.0E-13 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger JE55_RS00225 5348fe54d16ef6050501bbc9fb027e24 198 SMART SM00493 80 165 1.9E-7 T 22-04-2016 IPR006171 Toprim domain JE55_RS00225 5348fe54d16ef6050501bbc9fb027e24 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 JE55_RS00225 5348fe54d16ef6050501bbc9fb027e24 198 PANTHER PTHR30446 1 198 3.7E-96 T 22-04-2016 JE55_RS04820 ca0c6fafbed82798562390d104cc466f 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 8 415 52.846 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 JE55_RS04820 ca0c6fafbed82798562390d104cc466f 415 PANTHER PTHR11680:SF9 1 414 6.0E-257 T 22-04-2016 JE55_RS04820 ca0c6fafbed82798562390d104cc466f 415 PIRSF PIRSF000412 1 415 7.4E-169 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 JE55_RS04820 ca0c6fafbed82798562390d104cc466f 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 JE55_RS04820 ca0c6fafbed82798562390d104cc466f 415 Gene3D G3DSA:3.90.1150.10 284 414 2.0E-55 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS04820 ca0c6fafbed82798562390d104cc466f 415 Pfam PF00464 Serine hydroxymethyltransferase 10 384 1.5E-175 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 JE55_RS04820 ca0c6fafbed82798562390d104cc466f 415 PANTHER PTHR11680 1 414 6.0E-257 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 JE55_RS04820 ca0c6fafbed82798562390d104cc466f 415 SUPERFAMILY SSF53383 6 414 2.18E-182 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS04820 ca0c6fafbed82798562390d104cc466f 415 Gene3D G3DSA:3.40.640.10 38 283 4.6E-107 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS30865 4d57cdd3add69d4751a62bcad9ee3fa4 169 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 66 168 4.8E-13 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 JE55_RS30865 4d57cdd3add69d4751a62bcad9ee3fa4 169 SUPERFAMILY SSF53756 5 168 2.04E-21 T 22-04-2016 JE55_RS30865 4d57cdd3add69d4751a62bcad9ee3fa4 169 Gene3D G3DSA:3.40.50.2000 93 168 6.5E-18 T 22-04-2016 JE55_RS22565 05af3d31261443153edeaf7a87481acb 72 Gene3D G3DSA:1.10.10.10 2 70 9.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS22565 05af3d31261443153edeaf7a87481acb 72 PANTHER PTHR30118:SF8 2 71 1.0E-18 T 22-04-2016 JE55_RS22565 05af3d31261443153edeaf7a87481acb 72 PANTHER PTHR30118 2 71 1.0E-18 T 22-04-2016 JE55_RS22565 05af3d31261443153edeaf7a87481acb 72 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 56 1.3E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS22565 05af3d31261443153edeaf7a87481acb 72 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 3.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS22565 05af3d31261443153edeaf7a87481acb 72 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 3.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS22565 05af3d31261443153edeaf7a87481acb 72 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 3.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS22565 05af3d31261443153edeaf7a87481acb 72 SUPERFAMILY SSF46785 2 71 2.9E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00450 0d1c30f569be326e3c24961434aa538f 306 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 10 38 4.0E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JE55_RS00450 0d1c30f569be326e3c24961434aa538f 306 PANTHER PTHR22953 59 231 4.8E-14 T 22-04-2016 JE55_RS00450 0d1c30f569be326e3c24961434aa538f 306 Gene3D G3DSA:3.60.21.10 39 284 4.8E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS00450 0d1c30f569be326e3c24961434aa538f 306 Pfam PF00149 Calcineurin-like phosphoesterase 44 232 3.7E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 JE55_RS00450 0d1c30f569be326e3c24961434aa538f 306 SUPERFAMILY SSF56300 41 283 1.18E-43 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS05345 db9d08e31ca97e7d1f7613fc2bf6d64e 184 SMART SM00072 3 182 2.4E-6 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JE55_RS05345 db9d08e31ca97e7d1f7613fc2bf6d64e 184 PANTHER PTHR23117:SF8 5 179 6.9E-53 T 22-04-2016 JE55_RS05345 db9d08e31ca97e7d1f7613fc2bf6d64e 184 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 3 179 35.54 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 JE55_RS05345 db9d08e31ca97e7d1f7613fc2bf6d64e 184 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 5 179 8.2E-66 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 JE55_RS05345 db9d08e31ca97e7d1f7613fc2bf6d64e 184 Gene3D G3DSA:3.40.50.300 2 26 4.3E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05345 db9d08e31ca97e7d1f7613fc2bf6d64e 184 Gene3D G3DSA:3.40.50.300 74 150 4.3E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05345 db9d08e31ca97e7d1f7613fc2bf6d64e 184 Pfam PF13238 AAA domain 8 140 7.5E-8 T 22-04-2016 JE55_RS05345 db9d08e31ca97e7d1f7613fc2bf6d64e 184 SUPERFAMILY SSF52540 4 182 1.84E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05345 db9d08e31ca97e7d1f7613fc2bf6d64e 184 PANTHER PTHR23117 5 179 6.9E-53 T 22-04-2016 JE55_RS04995 978a0e675cc5da0d111cd04b69b24ff3 510 Gene3D G3DSA:3.40.720.10 261 450 2.0E-19 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 JE55_RS04995 978a0e675cc5da0d111cd04b69b24ff3 510 Pfam PF00884 Sulfatase 213 474 5.3E-37 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 JE55_RS04995 978a0e675cc5da0d111cd04b69b24ff3 510 SUPERFAMILY SSF53649 240 448 4.8E-23 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 JE55_RS17690 09f99573bc0b3622f3464af0629f318d 100 PANTHER PTHR33215:SF4 1 100 1.5E-21 T 22-04-2016 JE55_RS17690 09f99573bc0b3622f3464af0629f318d 100 Gene3D G3DSA:1.10.10.60 7 89 5.9E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS17690 09f99573bc0b3622f3464af0629f318d 100 Pfam PF01527 Transposase 3 80 2.5E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 JE55_RS17690 09f99573bc0b3622f3464af0629f318d 100 PANTHER PTHR33215 1 100 1.5E-21 T 22-04-2016 JE55_RS17690 09f99573bc0b3622f3464af0629f318d 100 SUPERFAMILY SSF46689 1 94 2.33E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS11265 09f99573bc0b3622f3464af0629f318d 100 PANTHER PTHR33215:SF4 1 100 1.5E-21 T 22-04-2016 JE55_RS11265 09f99573bc0b3622f3464af0629f318d 100 Gene3D G3DSA:1.10.10.60 7 89 5.9E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS11265 09f99573bc0b3622f3464af0629f318d 100 Pfam PF01527 Transposase 3 80 2.5E-13 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 JE55_RS11265 09f99573bc0b3622f3464af0629f318d 100 PANTHER PTHR33215 1 100 1.5E-21 T 22-04-2016 JE55_RS11265 09f99573bc0b3622f3464af0629f318d 100 SUPERFAMILY SSF46689 1 94 2.33E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS14530 34d0b5ffbf06137938b2e32286e54bf8 218 Gene3D G3DSA:1.20.1050.10 89 209 1.3E-30 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS14530 34d0b5ffbf06137938b2e32286e54bf8 218 SUPERFAMILY SSF47616 75 208 1.18E-14 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS14530 34d0b5ffbf06137938b2e32286e54bf8 218 PANTHER PTHR11260 2 207 2.8E-21 T 22-04-2016 JE55_RS14530 34d0b5ffbf06137938b2e32286e54bf8 218 Gene3D G3DSA:3.40.30.10 1 88 3.1E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS14530 34d0b5ffbf06137938b2e32286e54bf8 218 SUPERFAMILY SSF52833 1 98 5.95E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS14530 34d0b5ffbf06137938b2e32286e54bf8 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 78 9.4E-20 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JE55_RS14530 34d0b5ffbf06137938b2e32286e54bf8 218 Pfam PF13410 Glutathione S-transferase, C-terminal domain 126 192 9.6E-6 T 22-04-2016 JE55_RS08000 08feb5e7f3904bb8a3f6abf19b6aeffc 273 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 1.5E-25 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 JE55_RS08000 08feb5e7f3904bb8a3f6abf19b6aeffc 273 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 259 1.3E-53 T 22-04-2016 IPR023214 HAD-like domain JE55_RS08000 08feb5e7f3904bb8a3f6abf19b6aeffc 273 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 JE55_RS08000 08feb5e7f3904bb8a3f6abf19b6aeffc 273 PANTHER PTHR10000 1 267 7.2E-85 T 22-04-2016 JE55_RS08000 08feb5e7f3904bb8a3f6abf19b6aeffc 273 SUPERFAMILY SSF56784 1 265 1.68E-63 T 22-04-2016 IPR023214 HAD-like domain JE55_RS08000 08feb5e7f3904bb8a3f6abf19b6aeffc 273 Gene3D G3DSA:3.30.1240.10 102 177 9.2E-19 T 22-04-2016 JE55_RS08000 08feb5e7f3904bb8a3f6abf19b6aeffc 273 PANTHER PTHR10000:SF20 1 267 7.2E-85 T 22-04-2016 JE55_RS08000 08feb5e7f3904bb8a3f6abf19b6aeffc 273 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 22-04-2016 JE55_RS08000 08feb5e7f3904bb8a3f6abf19b6aeffc 273 Gene3D G3DSA:3.40.50.1000 1 72 3.4E-47 T 22-04-2016 IPR023214 HAD-like domain JE55_RS08000 08feb5e7f3904bb8a3f6abf19b6aeffc 273 Gene3D G3DSA:3.40.50.1000 178 267 3.4E-47 T 22-04-2016 IPR023214 HAD-like domain JE55_RS08000 08feb5e7f3904bb8a3f6abf19b6aeffc 273 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 5.5E-48 T 22-04-2016 IPR000150 Cof protein GO:0016787 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PANTHER PTHR20854 1 267 3.2E-103 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.5E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 207 231 1.5E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 1.5E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 1.5E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 1.5E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 176 197 1.5E-61 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 1.5E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 197 209 1.5E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 103 122 1.5E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 155 181 1.5E-29 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 PANTHER PTHR20854:SF4 1 267 3.2E-103 T 22-04-2016 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 Gene3D G3DSA:3.30.540.10 2 150 5.6E-56 T 22-04-2016 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 SUPERFAMILY SSF56655 1 259 1.57E-85 T 22-04-2016 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 Gene3D G3DSA:3.40.190.80 151 259 3.8E-33 T 22-04-2016 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 Pfam PF00459 Inositol monophosphatase family 2 253 1.0E-67 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 JE55_RS01715 51522a95fb10cd17f094f5d00226f456 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 210 224 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 JE55_RS04675 aa49723846342c24b15c7afff6996554 404 SUPERFAMILY SSF53383 25 379 1.67E-83 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS04675 aa49723846342c24b15c7afff6996554 404 PANTHER PTHR21152:SF21 22 401 3.2E-75 T 22-04-2016 JE55_RS04675 aa49723846342c24b15c7afff6996554 404 PIRSF PIRSF000524 20 403 2.6E-91 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 JE55_RS04675 aa49723846342c24b15c7afff6996554 404 PANTHER PTHR21152 22 401 3.2E-75 T 22-04-2016 JE55_RS04675 aa49723846342c24b15c7afff6996554 404 Gene3D G3DSA:3.90.1150.10 278 384 1.3E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS04675 aa49723846342c24b15c7afff6996554 404 Gene3D G3DSA:3.40.640.10 44 277 4.2E-52 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS04675 aa49723846342c24b15c7afff6996554 404 Pfam PF00266 Aminotransferase class-V 48 324 1.5E-33 T 22-04-2016 IPR000192 Aminotransferase class V domain JE55_RS04675 aa49723846342c24b15c7afff6996554 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 203 223 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 289 1.3E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 SMART SM00388 234 293 9.6E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 SMART SM00387 331 447 6.1E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 Gene3D G3DSA:1.10.287.130 224 289 2.5E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 1.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 1.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 Pfam PF00672 HAMP domain 164 229 6.7E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 445 2.9E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 Pfam PF16524 Periplasmic domain of Sensor histidine kinase RisS 47 152 2.1E-40 T 22-04-2016 IPR032408 Sensor histidine kinase RisS, periplasmic domain JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 SMART SM00304 181 233 2.5E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 SUPERFAMILY SSF55874 286 445 3.8E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 SUPERFAMILY SSF47384 219 290 1.08E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 Gene3D G3DSA:3.30.565.10 294 449 1.2E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 PANTHER PTHR24423 2 17 2.9E-53 T 22-04-2016 JE55_RS00860 74e4cc635ad5614ac33d124b6ce15012 452 PANTHER PTHR24423 175 444 2.9E-53 T 22-04-2016 JE55_RS18145 f442d0de739a30c7df5d66dcd198d3eb 74 Gene3D G3DSA:1.10.260.40 1 67 9.3E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS18145 f442d0de739a30c7df5d66dcd198d3eb 74 PANTHER PTHR37301 2 72 2.1E-32 T 22-04-2016 JE55_RS18145 f442d0de739a30c7df5d66dcd198d3eb 74 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 3.7E-20 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JE55_RS18145 f442d0de739a30c7df5d66dcd198d3eb 74 SUPERFAMILY SSF47413 1 68 2.06E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS01080 740f761de02032cbb6f86c97fb655915 148 Gene3D G3DSA:2.40.280.10 3 122 3.5E-48 T 22-04-2016 IPR023620 Small protein B JE55_RS01080 740f761de02032cbb6f86c97fb655915 148 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 127 1.0E-67 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 JE55_RS01080 740f761de02032cbb6f86c97fb655915 148 Hamap MF_00023 SsrA-binding protein [smpB]. 1 148 72.832 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 JE55_RS01080 740f761de02032cbb6f86c97fb655915 148 Pfam PF01668 SmpB protein 3 65 8.9E-27 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 JE55_RS01080 740f761de02032cbb6f86c97fb655915 148 SUPERFAMILY SSF74982 3 127 4.32E-50 T 22-04-2016 IPR023620 Small protein B JE55_RS01080 740f761de02032cbb6f86c97fb655915 148 PANTHER PTHR30308:SF2 3 147 2.7E-71 T 22-04-2016 JE55_RS01080 740f761de02032cbb6f86c97fb655915 148 PANTHER PTHR30308 3 147 2.7E-71 T 22-04-2016 JE55_RS01080 740f761de02032cbb6f86c97fb655915 148 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 144 6.5E-54 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 JE55_RS01080 740f761de02032cbb6f86c97fb655915 148 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site JE55_RS07160 819529c3066edc0c9e0057aba62d0bee 184 PANTHER PTHR21087 9 156 2.1E-59 T 22-04-2016 JE55_RS07160 819529c3066edc0c9e0057aba62d0bee 184 ProSitePatterns PS01128 Shikimate kinase signature. 63 88 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS07160 819529c3066edc0c9e0057aba62d0bee 184 Gene3D G3DSA:3.40.50.300 9 178 6.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07160 819529c3066edc0c9e0057aba62d0bee 184 SUPERFAMILY SSF52540 8 171 1.04E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07160 819529c3066edc0c9e0057aba62d0bee 184 Pfam PF01202 Shikimate kinase 16 172 4.1E-53 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS07160 819529c3066edc0c9e0057aba62d0bee 184 PRINTS PR01100 Shikimate kinase family signature 80 89 1.6E-21 T 22-04-2016 JE55_RS07160 819529c3066edc0c9e0057aba62d0bee 184 PRINTS PR01100 Shikimate kinase family signature 62 70 1.6E-21 T 22-04-2016 JE55_RS07160 819529c3066edc0c9e0057aba62d0bee 184 PRINTS PR01100 Shikimate kinase family signature 34 47 1.6E-21 T 22-04-2016 JE55_RS07160 819529c3066edc0c9e0057aba62d0bee 184 PRINTS PR01100 Shikimate kinase family signature 101 118 1.6E-21 T 22-04-2016 JE55_RS07160 819529c3066edc0c9e0057aba62d0bee 184 PRINTS PR01100 Shikimate kinase family signature 10 25 1.6E-21 T 22-04-2016 JE55_RS07160 819529c3066edc0c9e0057aba62d0bee 184 Hamap MF_00109 Shikimate kinase [aroK]. 7 173 30.377 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 Gene3D G3DSA:1.10.10.10 190 247 3.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 70 358 4.6E-140 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 Gene3D G3DSA:1.10.10.10 290 354 1.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 112 346 1.0E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 Pfam PF04542 Sigma-70 region 2 117 186 7.2E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 SUPERFAMILY SSF88659 190 272 3.79E-7 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 141 154 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 PANTHER PTHR30603:SF15 34 354 2.7E-103 T 22-04-2016 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 PRINTS PR00046 Major sigma-70 factor signature 297 309 1.0E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 PRINTS PR00046 Major sigma-70 factor signature 165 173 1.0E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 PRINTS PR00046 Major sigma-70 factor signature 318 333 1.0E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 PRINTS PR00046 Major sigma-70 factor signature 141 154 1.0E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 PRINTS PR00046 Major sigma-70 factor signature 333 344 1.0E-23 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 SUPERFAMILY SSF88946 79 187 4.08E-44 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 Pfam PF00140 Sigma-70 factor, region 1.2 79 112 3.5E-8 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 PANTHER PTHR30603 34 354 2.7E-103 T 22-04-2016 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 359 38.364 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 318 344 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 Gene3D G3DSA:1.10.601.10 73 186 9.9E-56 T 22-04-2016 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 Pfam PF04545 Sigma-70, region 4 293 345 6.0E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 Pfam PF04539 Sigma-70 region 3 198 279 4.2E-7 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00200 11f1f19cc956bc684c8f38114d682489 359 SUPERFAMILY SSF88659 256 353 2.13E-24 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS06285 05019c97bdce7e6cdd73ec7f6005da2f 250 PANTHER PTHR35851 2 250 1.8E-44 T 22-04-2016 JE55_RS06285 05019c97bdce7e6cdd73ec7f6005da2f 250 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 7 235 24.862 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 JE55_RS06285 05019c97bdce7e6cdd73ec7f6005da2f 250 PANTHER PTHR35851:SF1 2 250 1.8E-44 T 22-04-2016 JE55_RS06285 05019c97bdce7e6cdd73ec7f6005da2f 250 Pfam PF08478 POTRA domain, FtsQ-type 37 106 5.6E-17 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type JE55_RS06285 05019c97bdce7e6cdd73ec7f6005da2f 250 Pfam PF03799 Cell division protein FtsQ 111 227 7.0E-27 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB JE55_RS05865 1017191a0f6158f51badbbb47267aae4 255 PANTHER PTHR30027 10 255 1.2E-72 T 22-04-2016 JE55_RS05865 1017191a0f6158f51badbbb47267aae4 255 Gene3D G3DSA:2.40.240.20 10 77 1.2E-23 T 22-04-2016 JE55_RS05865 1017191a0f6158f51badbbb47267aae4 255 Pfam PF04452 RNA methyltransferase 27 249 4.8E-63 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS05865 1017191a0f6158f51badbbb47267aae4 255 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 14 251 6.2E-49 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS05865 1017191a0f6158f51badbbb47267aae4 255 SUPERFAMILY SSF75217 80 255 2.66E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases JE55_RS05865 1017191a0f6158f51badbbb47267aae4 255 PANTHER PTHR30027:SF3 10 255 1.2E-72 T 22-04-2016 JE55_RS05865 1017191a0f6158f51badbbb47267aae4 255 Gene3D G3DSA:3.40.1280.10 81 255 2.1E-57 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS05865 1017191a0f6158f51badbbb47267aae4 255 SUPERFAMILY SSF88697 10 76 7.46E-15 T 22-04-2016 IPR015947 PUA-like domain JE55_RS05865 1017191a0f6158f51badbbb47267aae4 255 PIRSF PIRSF015601 9 255 1.1E-54 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 673 8.9E-244 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 Pfam PF00361 Proton-conducting membrane transporter 137 419 1.6E-83 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 161 182 8.1E-64 T 22-04-2016 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 114 134 8.1E-64 T 22-04-2016 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 234 255 8.1E-64 T 22-04-2016 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 324 336 8.1E-64 T 22-04-2016 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 86 111 8.1E-64 T 22-04-2016 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 429 448 8.1E-64 T 22-04-2016 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 256 282 8.1E-64 T 22-04-2016 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PANTHER PTHR22773 1 627 5.4E-256 T 22-04-2016 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 Pfam PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus 479 576 3.0E-6 T 22-04-2016 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal KEGG: 00624+1.6.5.- JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 88 108 2.8E-16 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 428 450 2.8E-16 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 274 296 2.8E-16 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 62 86 2.8E-16 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 488 509 2.8E-16 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 PANTHER PTHR22773:SF50 1 627 5.4E-256 T 22-04-2016 JE55_RS14450 f121b52d3ae1f35bd1a35f14832d1e7e 679 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 68 125 5.5E-26 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal JE55_RS02740 4f8f16504ada00ff783980602fe2c379 336 Pfam PF00296 Luciferase-like monooxygenase 4 302 1.1E-37 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JE55_RS02740 4f8f16504ada00ff783980602fe2c379 336 SUPERFAMILY SSF51679 2 325 6.28E-88 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JE55_RS02740 4f8f16504ada00ff783980602fe2c379 336 PANTHER PTHR30137 1 326 8.7E-144 T 22-04-2016 JE55_RS02740 4f8f16504ada00ff783980602fe2c379 336 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 325 2.2E-139 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 JE55_RS02740 4f8f16504ada00ff783980602fe2c379 336 PANTHER PTHR30137:SF2 1 326 8.7E-144 T 22-04-2016 JE55_RS02740 4f8f16504ada00ff783980602fe2c379 336 Gene3D G3DSA:3.20.20.30 3 332 3.4E-95 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 Gene3D G3DSA:1.10.540.10 1 121 1.2E-28 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 120 3.6E-22 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 219 1.3E-19 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 Gene3D G3DSA:2.40.110.10 124 221 2.6E-36 T 22-04-2016 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 PANTHER PTHR10909:SF229 366 398 1.5E-160 T 22-04-2016 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 PANTHER PTHR10909:SF229 1 347 1.5E-160 T 22-04-2016 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 Gene3D G3DSA:1.20.140.10 222 397 4.8E-33 T 22-04-2016 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 SUPERFAMILY SSF56645 2 244 2.36E-76 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 PANTHER PTHR10909 366 398 1.5E-160 T 22-04-2016 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 PANTHER PTHR10909 1 347 1.5E-160 T 22-04-2016 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 395 9.1E-27 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS14480 e1833a82a72b1a31e90188716dc96c24 398 SUPERFAMILY SSF47203 231 398 9.08E-27 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS05800 a35d761734b27539a9a74a35254c0964 142 PANTHER PTHR33202 7 132 6.0E-38 T 22-04-2016 JE55_RS05800 a35d761734b27539a9a74a35254c0964 142 Pfam PF01475 Ferric uptake regulator family 10 129 1.3E-45 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 JE55_RS05800 a35d761734b27539a9a74a35254c0964 142 SUPERFAMILY SSF46785 7 133 1.02E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05800 a35d761734b27539a9a74a35254c0964 142 Gene3D G3DSA:1.10.10.10 6 82 1.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09715 abe67d59bb22aa184abe47753bea979d 198 SUPERFAMILY SSF100950 14 196 3.49E-46 T 22-04-2016 JE55_RS09715 abe67d59bb22aa184abe47753bea979d 198 PIRSF PIRSF006806 11 193 2.4E-30 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase JE55_RS09715 abe67d59bb22aa184abe47753bea979d 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 14 190 5.1E-41 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase JE55_RS09715 abe67d59bb22aa184abe47753bea979d 198 PANTHER PTHR23407 5 195 5.2E-33 T 22-04-2016 JE55_RS09715 abe67d59bb22aa184abe47753bea979d 198 Gene3D G3DSA:3.40.50.10420 14 196 6.0E-44 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain JE55_RS09715 abe67d59bb22aa184abe47753bea979d 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 14 190 1.2E-28 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase JE55_RS09715 abe67d59bb22aa184abe47753bea979d 198 PANTHER PTHR23407:SF1 5 195 5.2E-33 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 SUPERFAMILY SSF82693 104 197 2.07E-19 T 22-04-2016 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 Pfam PF00873 AcrB/AcrD/AcrF family 68 476 1.1E-125 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 PANTHER PTHR32063 65 476 2.9E-215 T 22-04-2016 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 PANTHER PTHR32063:SF30 65 476 2.9E-215 T 22-04-2016 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 Gene3D G3DSA:3.30.2090.10 246 330 1.1E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 SUPERFAMILY SSF82714 247 330 2.35E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 Gene3D G3DSA:3.30.70.1430 104 205 4.6E-25 T 22-04-2016 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 Gene3D G3DSA:1.10.3850.10 340 475 4.7E-36 T 22-04-2016 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 PRINTS PR00702 Acriflavin resistance protein family signature 102 120 1.6E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 PRINTS PR00702 Acriflavin resistance protein family signature 449 473 1.6E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 PRINTS PR00702 Acriflavin resistance protein family signature 421 442 1.6E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 PRINTS PR00702 Acriflavin resistance protein family signature 74 98 1.6E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 PRINTS PR00702 Acriflavin resistance protein family signature 394 417 1.6E-39 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 SUPERFAMILY SSF82866 354 475 9.16E-27 T 22-04-2016 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 SUPERFAMILY SSF82693 201 246 9.94E-23 T 22-04-2016 JE55_RS19825 5b967480127c0e78940d6027b138ab9f 476 SUPERFAMILY SSF82693 332 388 9.94E-23 T 22-04-2016 JE55_RS15740 d297b72614d94ad9e89b65cd6d514fdd 174 SUPERFAMILY SSF49401 74 174 6.09E-6 T 22-04-2016 IPR008966 Adhesion domain JE55_RS15740 d297b72614d94ad9e89b65cd6d514fdd 174 Pfam PF05229 Spore Coat Protein U domain 29 171 6.7E-30 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS15740 d297b72614d94ad9e89b65cd6d514fdd 174 PANTHER PTHR37089 7 174 2.5E-22 T 22-04-2016 JE55_RS15740 d297b72614d94ad9e89b65cd6d514fdd 174 SMART SM00972 116 171 2.5E-12 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 Gene3D G3DSA:1.10.340.30 35 136 2.3E-45 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 50 181 5.9E-19 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 PANTHER PTHR10359 24 319 2.7E-83 T 22-04-2016 JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 Pfam PF00633 Helix-hairpin-helix motif 113 142 1.1E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 Gene3D G3DSA:1.10.1670.10 137 242 1.0E-36 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 Gene3D G3DSA:3.90.79.10 248 363 1.4E-20 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 ProSitePatterns PS01155 Endonuclease III family signature. 116 145 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 SUPERFAMILY SSF48150 17 242 4.08E-74 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 Pfam PF14815 NUDIX domain 251 361 2.8E-24 T 22-04-2016 IPR029119 MutY, C-terminal JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 SMART SM00478 53 208 2.7E-45 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 20 290 5.7E-104 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 JE55_RS11140 a99afe1d4de054f207a72347f535af80 368 SUPERFAMILY SSF55811 238 363 2.11E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS16785 751392e6d2b9b1f3dc1e30bb4924ec34 523 SUPERFAMILY SSF52540 14 235 9.24E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16785 751392e6d2b9b1f3dc1e30bb4924ec34 523 PANTHER PTHR24220:SF308 16 389 1.4E-153 T 22-04-2016 JE55_RS16785 751392e6d2b9b1f3dc1e30bb4924ec34 523 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS16785 751392e6d2b9b1f3dc1e30bb4924ec34 523 Gene3D G3DSA:3.40.50.300 12 234 3.0E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16785 751392e6d2b9b1f3dc1e30bb4924ec34 523 Pfam PF00005 ABC transporter 279 434 1.3E-14 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS16785 751392e6d2b9b1f3dc1e30bb4924ec34 523 Pfam PF00005 ABC transporter 29 179 2.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS16785 751392e6d2b9b1f3dc1e30bb4924ec34 523 SMART SM00382 38 227 2.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS16785 751392e6d2b9b1f3dc1e30bb4924ec34 523 SMART SM00382 287 483 0.0078 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS16785 751392e6d2b9b1f3dc1e30bb4924ec34 523 Gene3D G3DSA:3.40.50.300 274 486 1.6E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16785 751392e6d2b9b1f3dc1e30bb4924ec34 523 PANTHER PTHR24220 16 389 1.4E-153 T 22-04-2016 JE55_RS16785 751392e6d2b9b1f3dc1e30bb4924ec34 523 SUPERFAMILY SSF52540 269 487 2.57E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01625 faa5d4d6ed186400be001e15359139c0 412 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 47 373 5.6E-80 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 JE55_RS01625 faa5d4d6ed186400be001e15359139c0 412 PANTHER PTHR30469 1 383 7.4E-112 T 22-04-2016 JE55_RS01625 faa5d4d6ed186400be001e15359139c0 412 PANTHER PTHR30469:SF12 1 383 7.4E-112 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA JE55_RS01625 faa5d4d6ed186400be001e15359139c0 412 SUPERFAMILY SSF111369 63 295 6.15E-50 T 22-04-2016 JE55_RS01625 faa5d4d6ed186400be001e15359139c0 412 Gene3D G3DSA:2.40.50.100 180 213 8.1E-24 T 22-04-2016 JE55_RS01625 faa5d4d6ed186400be001e15359139c0 412 Gene3D G3DSA:2.40.50.100 72 105 8.1E-24 T 22-04-2016 JE55_RS01625 faa5d4d6ed186400be001e15359139c0 412 Pfam PF13533 Biotin-lipoyl like 73 119 2.3E-13 T 22-04-2016 JE55_RS01625 faa5d4d6ed186400be001e15359139c0 412 Pfam PF13437 HlyD family secretion protein 182 282 5.7E-5 T 22-04-2016 JE55_RS05665 f6e0df9b348f23a1b9de6251364d69fd 146 SUPERFAMILY SSF49764 6 145 8.72E-35 T 22-04-2016 IPR008978 HSP20-like chaperone JE55_RS05665 f6e0df9b348f23a1b9de6251364d69fd 146 PANTHER PTHR11527 1 146 6.1E-27 T 22-04-2016 IPR031107 Small heat shock protein HSP20 JE55_RS05665 f6e0df9b348f23a1b9de6251364d69fd 146 PANTHER PTHR11527:SF122 1 146 6.1E-27 T 22-04-2016 JE55_RS05665 f6e0df9b348f23a1b9de6251364d69fd 146 Pfam PF00011 Hsp20/alpha crystallin family 47 146 2.8E-19 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain JE55_RS05665 f6e0df9b348f23a1b9de6251364d69fd 146 Gene3D G3DSA:2.60.40.790 5 146 1.6E-34 T 22-04-2016 IPR008978 HSP20-like chaperone JE55_RS07595 1c03ad1bf7d6345b92cad5983a408f79 191 Gene3D G3DSA:3.40.50.360 1 185 6.8E-63 T 22-04-2016 IPR029039 Flavoprotein-like domain JE55_RS07595 1c03ad1bf7d6345b92cad5983a408f79 191 PANTHER PTHR30546:SF0 1 126 3.4E-32 T 22-04-2016 JE55_RS07595 1c03ad1bf7d6345b92cad5983a408f79 191 PANTHER PTHR30546 1 126 3.4E-32 T 22-04-2016 JE55_RS07595 1c03ad1bf7d6345b92cad5983a408f79 191 Pfam PF03358 NADPH-dependent FMN reductase 15 130 5.8E-12 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JE55_RS07595 1c03ad1bf7d6345b92cad5983a408f79 191 SUPERFAMILY SSF52218 1 184 1.7E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain JE55_RS07595 1c03ad1bf7d6345b92cad5983a408f79 191 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 33 59 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 SUPERFAMILY SSF46785 14 75 1.64E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 SUPERFAMILY SSF54909 77 150 7.64E-13 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 42 1.9E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 15 31 1.9E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 42 61 1.9E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 PANTHER PTHR30154:SF14 7 159 5.5E-65 T 22-04-2016 JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 Pfam PF01037 Lrp/AsnC ligand binding domain 81 147 9.8E-11 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 PANTHER PTHR30154 7 159 5.5E-65 T 22-04-2016 JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 SMART SM00344 15 121 1.9E-30 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 15 61 9.3E-14 T 22-04-2016 JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 Gene3D G3DSA:1.10.10.10 13 66 6.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10095 6a600dedc572abefe543c94230d0dc76 162 Gene3D G3DSA:3.30.70.920 68 136 9.1E-15 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS01110 97b390268556ba5e8b0896ff6f62f9a0 633 Pfam PF09286 Pro-kumamolisin, activation domain 75 207 1.7E-29 T 22-04-2016 IPR015366 Peptidase S53, propeptide GO:0008236 JE55_RS01110 97b390268556ba5e8b0896ff6f62f9a0 633 PANTHER PTHR14218:SF15 488 625 8.7E-46 T 22-04-2016 JE55_RS01110 97b390268556ba5e8b0896ff6f62f9a0 633 PANTHER PTHR14218:SF15 75 470 8.7E-46 T 22-04-2016 JE55_RS01110 97b390268556ba5e8b0896ff6f62f9a0 633 SUPERFAMILY SSF54897 76 219 9.52E-44 T 22-04-2016 IPR009020 Proteinase inhibitor, propeptide JE55_RS01110 97b390268556ba5e8b0896ff6f62f9a0 633 SMART SM00944 67 208 3.3E-54 T 22-04-2016 IPR015366 Peptidase S53, propeptide GO:0008236 JE55_RS01110 97b390268556ba5e8b0896ff6f62f9a0 633 Gene3D G3DSA:3.40.50.200 249 627 2.5E-75 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JE55_RS01110 97b390268556ba5e8b0896ff6f62f9a0 633 PANTHER PTHR14218 488 625 8.7E-46 T 22-04-2016 JE55_RS01110 97b390268556ba5e8b0896ff6f62f9a0 633 PANTHER PTHR14218 75 470 8.7E-46 T 22-04-2016 JE55_RS01110 97b390268556ba5e8b0896ff6f62f9a0 633 Pfam PF00082 Subtilase family 352 566 1.2E-10 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JE55_RS01110 97b390268556ba5e8b0896ff6f62f9a0 633 SUPERFAMILY SSF52743 257 626 2.47E-65 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 JE55_RS01110 97b390268556ba5e8b0896ff6f62f9a0 633 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 545 555 - T 22-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site JE55_RS17185 f76fbd8a398942e870b23c0da1b2637e 244 Gene3D G3DSA:3.40.1010.10 5 137 1.1E-34 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 JE55_RS17185 f76fbd8a398942e870b23c0da1b2637e 244 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 6 238 3.7E-65 T 22-04-2016 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 JE55_RS17185 f76fbd8a398942e870b23c0da1b2637e 244 PANTHER PTHR21091:SF127 6 219 1.0E-73 T 22-04-2016 JE55_RS17185 f76fbd8a398942e870b23c0da1b2637e 244 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 104 136 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 JE55_RS17185 f76fbd8a398942e870b23c0da1b2637e 244 PANTHER PTHR21091 6 219 1.0E-73 T 22-04-2016 JE55_RS17185 f76fbd8a398942e870b23c0da1b2637e 244 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 220 6.5E-46 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS17185 f76fbd8a398942e870b23c0da1b2637e 244 SUPERFAMILY SSF53790 3 239 6.02E-48 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS17185 f76fbd8a398942e870b23c0da1b2637e 244 PIRSF PIRSF036427 4 244 9.2E-71 T 22-04-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 SUPERFAMILY SSF47384 370 433 3.14E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Gene3D G3DSA:1.10.287.560 369 433 5.8E-23 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 SMART SM00073 5 102 1.9E-33 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 SUPERFAMILY SSF55874 435 615 1.83E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 SUPERFAMILY SSF47226 5 126 2.75E-33 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Pfam PF09078 CheY binding 212 274 8.6E-27 T 22-04-2016 IPR015162 CheY binding JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Gene3D G3DSA:2.40.50.180 641 703 2.5E-12 T 22-04-2016 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 PANTHER PTHR22617:SF20 1 151 5.7E-276 T 22-04-2016 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 PANTHER PTHR22617:SF20 184 765 5.7E-276 T 22-04-2016 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Pfam PF01584 CheW-like domain 622 750 7.9E-22 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Pfam PF01627 Hpt domain 8 93 1.0E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 PANTHER PTHR22617 1 151 5.7E-276 T 22-04-2016 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 PANTHER PTHR22617 184 765 5.7E-276 T 22-04-2016 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 SUPERFAMILY SSF50341 616 748 5.23E-29 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Gene3D G3DSA:3.30.565.10 434 616 2.5E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 SMART SM00260 609 749 4.1E-33 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Gene3D G3DSA:1.20.120.160 4 144 2.7E-40 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 SMART SM00387 477 617 3.7E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 616 4.1E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 SMART SM01231 369 432 2.8E-21 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Gene3D G3DSA:2.30.30.40 704 748 8.3E-23 T 22-04-2016 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Gene3D G3DSA:2.30.30.40 617 638 8.3E-23 T 22-04-2016 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 370 432 5.2E-18 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 536 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 571 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 601 614 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 577 595 2.7E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 SUPERFAMILY SSF55052 210 276 4.97E-23 T 22-04-2016 IPR015162 CheY binding JE55_RS07955 fff641d83b45a828038039867f2a5aab 767 Gene3D G3DSA:3.30.70.400 208 275 2.5E-29 T 22-04-2016 IPR015162 CheY binding JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 Gene3D G3DSA:1.10.510.10 108 306 6.3E-43 T 22-04-2016 JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 Pfam PF00069 Protein kinase domain 39 305 6.9E-46 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 TIGRFAM TIGR03903 TOMM_kin_cyc: TOMM system kinase/cyclase fusion protein 59 1347 0.0 T 22-04-2016 IPR023889 TOMM system kinase/cyclase fusion protein JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 Pfam PF13191 AAA ATPase domain 557 736 1.4E-19 T 22-04-2016 JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 Gene3D G3DSA:3.30.200.20 36 107 9.9E-19 T 22-04-2016 JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 SUPERFAMILY SSF52540 671 802 2.39E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 SUPERFAMILY SSF52540 553 635 2.39E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 SMART SM00220 38 307 8.2E-57 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 PANTHER PTHR24362 35 309 9.8E-62 T 22-04-2016 JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 Gene3D G3DSA:3.40.50.300 682 751 1.1E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 Gene3D G3DSA:3.40.50.300 541 628 1.1E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 SUPERFAMILY SSF55073 354 516 5.34E-14 T 22-04-2016 IPR029787 Nucleotide cyclase JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 Gene3D G3DSA:3.30.70.1230 380 512 6.3E-4 T 22-04-2016 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase GO:0009190|GO:0016849|GO:0035556 JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 162 174 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 JE55_RS11350 56a9261e4d24030ebf6660295e466b44 1359 SUPERFAMILY SSF56112 36 307 1.29E-62 T 22-04-2016 IPR011009 Protein kinase-like domain JE55_RS10915 b5dd033dbfd00072e25c4bb216241afe 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 75 87 5.7E-7 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 JE55_RS10915 b5dd033dbfd00072e25c4bb216241afe 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 180 193 5.7E-7 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 JE55_RS10915 b5dd033dbfd00072e25c4bb216241afe 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 264 283 5.7E-7 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 JE55_RS10915 b5dd033dbfd00072e25c4bb216241afe 398 SUPERFAMILY SSF51419 33 277 8.14E-33 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS10915 b5dd033dbfd00072e25c4bb216241afe 398 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 394 7.0E-10 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 JE55_RS10915 b5dd033dbfd00072e25c4bb216241afe 398 SUPERFAMILY SSF50621 253 395 6.28E-25 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 JE55_RS10915 b5dd033dbfd00072e25c4bb216241afe 398 Gene3D G3DSA:3.20.20.10 41 263 2.9E-25 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS10915 b5dd033dbfd00072e25c4bb216241afe 398 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 52 274 8.8E-14 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 JE55_RS10915 b5dd033dbfd00072e25c4bb216241afe 398 PANTHER PTHR11482 336 376 3.4E-21 T 22-04-2016 JE55_RS10915 b5dd033dbfd00072e25c4bb216241afe 398 PANTHER PTHR11482 21 320 3.4E-21 T 22-04-2016 JE55_RS10915 b5dd033dbfd00072e25c4bb216241afe 398 Gene3D G3DSA:2.40.37.10 264 396 1.3E-21 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 JE55_RS04685 4254a63b9b3a5cba836280fd922cfe60 334 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 298 1.2E-58 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JE55_RS04685 4254a63b9b3a5cba836280fd922cfe60 334 PANTHER PTHR10996 2 324 1.8E-158 T 22-04-2016 JE55_RS04685 4254a63b9b3a5cba836280fd922cfe60 334 PANTHER PTHR10996:SF161 2 324 1.8E-158 T 22-04-2016 JE55_RS04685 4254a63b9b3a5cba836280fd922cfe60 334 SUPERFAMILY SSF52283 2 135 8.72E-40 T 22-04-2016 JE55_RS04685 4254a63b9b3a5cba836280fd922cfe60 334 SUPERFAMILY SSF51735 102 299 1.19E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04685 4254a63b9b3a5cba836280fd922cfe60 334 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 328 2.7E-30 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 JE55_RS04685 4254a63b9b3a5cba836280fd922cfe60 334 Gene3D G3DSA:3.40.50.720 139 305 1.6E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04685 4254a63b9b3a5cba836280fd922cfe60 334 Gene3D G3DSA:3.40.50.720 2 138 7.7E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04685 4254a63b9b3a5cba836280fd922cfe60 334 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JE55_RS04685 4254a63b9b3a5cba836280fd922cfe60 334 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JE55_RS17000 707d8ce5879d2ac2b133eb1beb303e93 315 Gene3D G3DSA:3.40.50.2300 156 303 2.5E-38 T 22-04-2016 JE55_RS17000 707d8ce5879d2ac2b133eb1beb303e93 315 SUPERFAMILY SSF53822 15 313 1.18E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS17000 707d8ce5879d2ac2b133eb1beb303e93 315 Gene3D G3DSA:3.40.50.2300 38 155 6.8E-46 T 22-04-2016 JE55_RS17000 707d8ce5879d2ac2b133eb1beb303e93 315 PANTHER PTHR32196:SF9 28 307 1.5E-73 T 22-04-2016 JE55_RS17000 707d8ce5879d2ac2b133eb1beb303e93 315 Pfam PF13407 Periplasmic binding protein domain 41 284 3.3E-52 T 22-04-2016 IPR025997 Periplasmic binding protein JE55_RS17000 707d8ce5879d2ac2b133eb1beb303e93 315 PANTHER PTHR32196 28 307 1.5E-73 T 22-04-2016 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 SUPERFAMILY SSF53901 4 270 8.52E-80 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 SUPERFAMILY SSF53901 272 393 8.87E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 PANTHER PTHR18919 1 394 1.7E-196 T 22-04-2016 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 Gene3D G3DSA:3.40.47.10 144 194 1.5E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 Gene3D G3DSA:3.40.47.10 278 393 1.5E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 Gene3D G3DSA:3.40.47.10 4 125 2.4E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 Gene3D G3DSA:3.40.47.10 195 276 2.4E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 PIRSF PIRSF000429 1 394 3.7E-127 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 Pfam PF00108 Thiolase, N-terminal domain 5 263 1.2E-91 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 Pfam PF02803 Thiolase, C-terminal domain 272 393 7.2E-46 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 PANTHER PTHR18919:SF95 1 394 1.7E-196 T 22-04-2016 JE55_RS00020 5d90986bcdc3e79c17e57c271f288c71 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 5.4E-138 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS13915 8fae3e51a3a3db491ee7c439f18e5cb3 360 Pfam PF13439 Glycosyltransferase Family 4 14 169 9.9E-21 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JE55_RS13915 8fae3e51a3a3db491ee7c439f18e5cb3 360 Gene3D G3DSA:3.40.50.2000 151 315 3.1E-17 T 22-04-2016 JE55_RS13915 8fae3e51a3a3db491ee7c439f18e5cb3 360 PANTHER PTHR12526 1 360 2.0E-31 T 22-04-2016 JE55_RS13915 8fae3e51a3a3db491ee7c439f18e5cb3 360 SUPERFAMILY SSF53756 1 350 2.78E-52 T 22-04-2016 JE55_RS13915 8fae3e51a3a3db491ee7c439f18e5cb3 360 Pfam PF00534 Glycosyl transferases group 1 231 315 1.3E-11 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS13185 148a2e7b0d8d5e3a3667a630ae046bfd 352 SUPERFAMILY SSF52733 14 348 4.19E-118 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 JE55_RS13185 148a2e7b0d8d5e3a3667a630ae046bfd 352 PANTHER PTHR21712:SF4 11 352 7.1E-115 T 22-04-2016 JE55_RS13185 148a2e7b0d8d5e3a3667a630ae046bfd 352 PANTHER PTHR21712 11 352 7.1E-115 T 22-04-2016 JE55_RS13185 148a2e7b0d8d5e3a3667a630ae046bfd 352 Pfam PF02277 Phosphoribosyltransferase 16 347 3.5E-131 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 JE55_RS13185 148a2e7b0d8d5e3a3667a630ae046bfd 352 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 14 349 36.403 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 JE55_RS13185 148a2e7b0d8d5e3a3667a630ae046bfd 352 Gene3D G3DSA:3.40.50.10210 74 330 2.3E-109 T 22-04-2016 JE55_RS13185 148a2e7b0d8d5e3a3667a630ae046bfd 352 Gene3D G3DSA:1.10.1610.10 6 73 1.4E-31 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 JE55_RS13185 148a2e7b0d8d5e3a3667a630ae046bfd 352 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 16 347 1.7E-139 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 JE55_RS09725 d3771ff1d86758e231e0365228d75521 319 SUPERFAMILY SSF51735 1 262 3.47E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS09725 d3771ff1d86758e231e0365228d75521 319 Gene3D G3DSA:3.40.50.720 1 231 9.1E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS09725 d3771ff1d86758e231e0365228d75521 319 Pfam PF13460 NAD(P)H-binding 10 159 1.1E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS09725 d3771ff1d86758e231e0365228d75521 319 PANTHER PTHR12126 3 303 7.0E-60 T 22-04-2016 JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 PANTHER PTHR10242:SF3 15 59 4.7E-78 T 22-04-2016 JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 SUPERFAMILY SSF55945 16 114 1.29E-26 T 22-04-2016 JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 SMART SM01009 16 134 2.1E-44 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 SMART SM00478 144 303 1.5E-6 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 PANTHER PTHR10242 81 300 4.7E-78 T 22-04-2016 JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 PANTHER PTHR10242 15 59 4.7E-78 T 22-04-2016 JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 PANTHER PTHR10242:SF3 81 300 4.7E-78 T 22-04-2016 JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 Gene3D G3DSA:1.10.340.30 135 253 3.3E-37 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 Pfam PF06029 AlkA N-terminal domain 16 134 3.9E-32 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 140 292 5.8E-8 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 Gene3D G3DSA:1.10.1670.10 255 303 1.9E-14 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 Gene3D G3DSA:3.30.310.20 17 134 2.7E-33 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal JE55_RS09105 012b5c1c6a6f77c49f9634ea60da801b 313 SUPERFAMILY SSF48150 125 300 1.43E-41 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 SUPERFAMILY SSF55874 417 574 1.83E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 Gene3D G3DSA:3.30.565.10 432 577 6.8E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 559 572 2.0E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 2.0E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 2.0E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 553 2.0E-20 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 109 4.1E-19 T 22-04-2016 IPR005330 MHYT domain JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 Pfam PF03707 Bacterial signalling protein N terminal repeat 115 163 4.0E-16 T 22-04-2016 IPR005330 MHYT domain JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 Pfam PF03707 Bacterial signalling protein N terminal repeat 183 241 2.6E-6 T 22-04-2016 IPR005330 MHYT domain JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 573 9.6E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 SUPERFAMILY SSF47384 321 361 7.85E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 SUPERFAMILY SSF47384 395 424 7.85E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 SMART SM00387 467 575 9.7E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 Pfam PF00512 His Kinase A (phospho-acceptor) domain 327 424 6.5E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 PANTHER PTHR24423 296 354 2.9E-83 T 22-04-2016 JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 PANTHER PTHR24423 391 585 2.9E-83 T 22-04-2016 JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 PANTHER PTHR24423:SF497 296 354 2.9E-83 T 22-04-2016 JE55_RS11900 2e07468f5ebe7dcb55df531031915d8d 630 PANTHER PTHR24423:SF497 391 585 2.9E-83 T 22-04-2016 JE55_RS13450 835c05e774f4af763dde32fd0a8b2f4a 258 PANTHER PTHR18966:SF237 21 250 3.7E-93 T 22-04-2016 JE55_RS13450 835c05e774f4af763dde32fd0a8b2f4a 258 Gene3D G3DSA:3.40.190.10 112 207 3.8E-31 T 22-04-2016 JE55_RS13450 835c05e774f4af763dde32fd0a8b2f4a 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 250 3.2E-89 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 JE55_RS13450 835c05e774f4af763dde32fd0a8b2f4a 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 JE55_RS13450 835c05e774f4af763dde32fd0a8b2f4a 258 PANTHER PTHR18966 21 250 3.7E-93 T 22-04-2016 JE55_RS13450 835c05e774f4af763dde32fd0a8b2f4a 258 Gene3D G3DSA:3.40.190.10 212 255 3.2E-44 T 22-04-2016 JE55_RS13450 835c05e774f4af763dde32fd0a8b2f4a 258 Gene3D G3DSA:3.40.190.10 21 110 3.2E-44 T 22-04-2016 JE55_RS13450 835c05e774f4af763dde32fd0a8b2f4a 258 SUPERFAMILY SSF53850 1 253 7.97E-69 T 22-04-2016 JE55_RS13450 835c05e774f4af763dde32fd0a8b2f4a 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 251 1.4E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS13450 835c05e774f4af763dde32fd0a8b2f4a 258 SMART SM00062 24 253 8.1E-72 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS13770 981fba32f3095c241c129a4ad2b94452 79 PANTHER PTHR40034 9 75 3.7E-15 T 22-04-2016 JE55_RS13770 981fba32f3095c241c129a4ad2b94452 79 Pfam PF11755 Protein of unknown function (DUF3311) 16 73 8.8E-25 T 22-04-2016 IPR021741 Protein of unknown function DUF3311 JE55_RS13770 981fba32f3095c241c129a4ad2b94452 79 PANTHER PTHR40034:SF1 9 75 3.7E-15 T 22-04-2016 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 7 60 1.1E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 SUPERFAMILY SSF50692 529 690 8.82E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 Pfam PF00384 Molybdopterin oxidoreductase 63 475 3.1E-52 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 PANTHER PTHR11615 9 690 3.2E-185 T 22-04-2016 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 Gene3D G3DSA:2.20.25.90 7 64 3.9E-17 T 22-04-2016 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 Gene3D G3DSA:2.40.40.20 550 690 3.3E-44 T 22-04-2016 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 Pfam PF01568 Molydopterin dinucleotide binding domain 575 684 2.3E-23 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 Gene3D G3DSA:3.40.50.740 65 140 2.0E-52 T 22-04-2016 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 Gene3D G3DSA:3.40.50.740 323 542 2.0E-52 T 22-04-2016 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 SUPERFAMILY SSF53706 7 567 6.41E-166 T 22-04-2016 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 PANTHER PTHR11615:SF127 9 690 3.2E-185 T 22-04-2016 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 421 438 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 Gene3D G3DSA:3.40.228.10 141 322 2.0E-58 T 22-04-2016 JE55_RS06365 b9336f2b6f78fb5744d221cc634bd8de 691 SMART SM00926 5 60 1.6E-18 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 JE55_RS05855 e9a3a854ebe8392c2954cb40d4852fb5 285 Pfam PF01564 Spermine/spermidine synthase 26 232 1.4E-46 T 22-04-2016 JE55_RS05855 e9a3a854ebe8392c2954cb40d4852fb5 285 PANTHER PTHR11558 27 282 3.2E-80 T 22-04-2016 JE55_RS05855 e9a3a854ebe8392c2954cb40d4852fb5 285 Gene3D G3DSA:3.40.50.150 57 281 4.9E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS05855 e9a3a854ebe8392c2954cb40d4852fb5 285 SUPERFAMILY SSF53335 6 281 6.62E-71 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS05855 e9a3a854ebe8392c2954cb40d4852fb5 285 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 5 282 30.668 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 JE55_RS05855 e9a3a854ebe8392c2954cb40d4852fb5 285 Gene3D G3DSA:2.30.140.10 10 54 8.6E-10 T 22-04-2016 JE55_RS08960 ef4c98d7dbefb0d1b6f8d4c25ae19f9d 171 SUPERFAMILY SSF88659 95 157 2.62E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS08960 ef4c98d7dbefb0d1b6f8d4c25ae19f9d 171 SUPERFAMILY SSF88946 10 92 3.61E-15 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS08960 ef4c98d7dbefb0d1b6f8d4c25ae19f9d 171 PANTHER PTHR30173:SF6 11 170 1.4E-34 T 22-04-2016 JE55_RS08960 ef4c98d7dbefb0d1b6f8d4c25ae19f9d 171 Gene3D G3DSA:1.10.1740.10 9 76 2.3E-17 T 22-04-2016 JE55_RS08960 ef4c98d7dbefb0d1b6f8d4c25ae19f9d 171 PANTHER PTHR30173 11 170 1.4E-34 T 22-04-2016 JE55_RS08960 ef4c98d7dbefb0d1b6f8d4c25ae19f9d 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 155 2.3E-22 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS08960 ef4c98d7dbefb0d1b6f8d4c25ae19f9d 171 Pfam PF08281 Sigma-70, region 4 104 154 5.8E-16 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS08960 ef4c98d7dbefb0d1b6f8d4c25ae19f9d 171 Gene3D G3DSA:1.10.10.10 96 157 5.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08960 ef4c98d7dbefb0d1b6f8d4c25ae19f9d 171 Pfam PF04542 Sigma-70 region 2 11 76 1.3E-10 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 SMART SM00422 1 70 2.9E-28 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.3E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.3E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.3E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 1 126 1.5E-54 T 22-04-2016 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 Pfam PF13411 MerR HTH family regulatory protein 1 68 6.8E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 PANTHER PTHR30204:SF18 1 115 3.7E-48 T 22-04-2016 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 PANTHER PTHR30204 1 115 3.7E-48 T 22-04-2016 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 Gene3D G3DSA:1.10.1660.10 1 54 2.2E-26 T 22-04-2016 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 Gene3D G3DSA:1.10.1660.10 55 131 2.0E-27 T 22-04-2016 JE55_RS08325 b9ffae2e140ac689ef0c9dbdb2002e4a 143 SUPERFAMILY SSF46955 1 126 2.75E-35 T 22-04-2016 IPR009061 Putative DNA-binding domain JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 Gene3D G3DSA:1.10.10.10 342 419 2.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 PANTHER PTHR30514 14 336 6.1E-83 T 22-04-2016 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 PANTHER PTHR30514:SF0 14 336 6.1E-83 T 22-04-2016 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 TIGRFAM TIGR00749 glk: glucokinase 21 323 2.3E-98 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 Gene3D G3DSA:3.40.367.20 115 314 6.8E-70 T 22-04-2016 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 Pfam PF01380 SIS domain 465 592 9.7E-18 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 SUPERFAMILY SSF53697 437 598 6.07E-37 T 22-04-2016 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 Hamap MF_00524 Glucokinase [glk]. 17 331 37.295 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 Pfam PF01418 Helix-turn-helix domain, rpiR family 344 412 1.3E-18 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 SUPERFAMILY SSF53067 23 333 2.28E-60 T 22-04-2016 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 Gene3D G3DSA:3.40.50.10490 437 600 5.4E-35 T 22-04-2016 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 SUPERFAMILY SSF46689 343 416 8.96E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 ProSitePatterns PS00356 LacI-type HTH domain signature. 377 395 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS04055 b55cfaf38eec8600f3d53726a171dd8d 641 Pfam PF02685 Glucokinase 21 329 1.8E-111 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 JE55_RS00155 100c442e553b3fe16efcf9b71d7b2e94 434 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 27 419 5.6E-114 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 JE55_RS00155 100c442e553b3fe16efcf9b71d7b2e94 434 PANTHER PTHR30454 41 432 1.8E-138 T 22-04-2016 JE55_RS00155 100c442e553b3fe16efcf9b71d7b2e94 434 PIRSF PIRSF004640 21 430 2.1E-125 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 JE55_RS00155 100c442e553b3fe16efcf9b71d7b2e94 434 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 28 424 27.557 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 JE55_RS00155 100c442e553b3fe16efcf9b71d7b2e94 434 Pfam PF04551 GcpE protein 41 420 1.1E-110 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 JE55_RS02385 7379c8cc438688caef923fc0cb88a028 83 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 3 82 2.4E-7 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JE55_RS02385 7379c8cc438688caef923fc0cb88a028 83 PANTHER PTHR33755 1 83 3.2E-14 T 22-04-2016 JE55_RS02385 7379c8cc438688caef923fc0cb88a028 83 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 82 6.2E-14 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JE55_RS14250 3043281a0befeec40cb4bce077413c1d 432 PANTHER PTHR23508 10 427 2.2E-204 T 22-04-2016 JE55_RS14250 3043281a0befeec40cb4bce077413c1d 432 PANTHER PTHR23508:SF13 10 427 2.2E-204 T 22-04-2016 JE55_RS14250 3043281a0befeec40cb4bce077413c1d 432 SUPERFAMILY SSF103473 18 422 3.01E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS14250 3043281a0befeec40cb4bce077413c1d 432 Pfam PF07690 Major Facilitator Superfamily 25 381 1.2E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS14250 3043281a0befeec40cb4bce077413c1d 432 Gene3D G3DSA:1.20.1250.20 18 220 1.4E-24 T 22-04-2016 JE55_RS14250 3043281a0befeec40cb4bce077413c1d 432 Gene3D G3DSA:1.20.1250.20 234 426 4.7E-17 T 22-04-2016 JE55_RS14250 3043281a0befeec40cb4bce077413c1d 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 80 96 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS14250 3043281a0befeec40cb4bce077413c1d 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS05535 d60350341146419d323263da10f84fa0 397 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 13 392 2.3E-98 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 JE55_RS05535 d60350341146419d323263da10f84fa0 397 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 303 316 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 JE55_RS05535 d60350341146419d323263da10f84fa0 397 SUPERFAMILY SSF51905 276 387 2.81E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS05535 d60350341146419d323263da10f84fa0 397 SUPERFAMILY SSF51905 11 182 2.81E-45 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS05535 d60350341146419d323263da10f84fa0 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 6.1E-18 T 22-04-2016 JE55_RS05535 d60350341146419d323263da10f84fa0 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 6.1E-18 T 22-04-2016 JE55_RS05535 d60350341146419d323263da10f84fa0 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 13 35 6.1E-18 T 22-04-2016 JE55_RS05535 d60350341146419d323263da10f84fa0 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 6.1E-18 T 22-04-2016 JE55_RS05535 d60350341146419d323263da10f84fa0 397 PANTHER PTHR13789 11 392 1.5E-88 T 22-04-2016 JE55_RS05535 d60350341146419d323263da10f84fa0 397 PANTHER PTHR13789:SF214 11 392 1.5E-88 T 22-04-2016 JE55_RS05535 d60350341146419d323263da10f84fa0 397 Pfam PF01494 FAD binding domain 12 327 1.1E-24 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 JE55_RS05535 d60350341146419d323263da10f84fa0 397 Gene3D G3DSA:3.50.50.60 11 189 9.1E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS05535 d60350341146419d323263da10f84fa0 397 Gene3D G3DSA:3.50.50.60 277 360 9.1E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS13240 28420c7c7bcc18cd97a4a4cb6b6f235b 128 PIRSF PIRSF006246 1 127 1.5E-51 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 JE55_RS13240 28420c7c7bcc18cd97a4a4cb6b6f235b 128 Pfam PF02261 Aspartate decarboxylase 1 115 2.3E-51 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 JE55_RS13240 28420c7c7bcc18cd97a4a4cb6b6f235b 128 PANTHER PTHR21012:SF0 2 127 3.3E-64 T 22-04-2016 JE55_RS13240 28420c7c7bcc18cd97a4a4cb6b6f235b 128 Gene3D G3DSA:2.40.40.20 1 125 1.7E-56 T 22-04-2016 JE55_RS13240 28420c7c7bcc18cd97a4a4cb6b6f235b 128 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 2.0E-65 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 JE55_RS13240 28420c7c7bcc18cd97a4a4cb6b6f235b 128 PANTHER PTHR21012 2 127 3.3E-64 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 JE55_RS13240 28420c7c7bcc18cd97a4a4cb6b6f235b 128 SUPERFAMILY SSF50692 1 121 5.63E-49 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain JE55_RS13240 28420c7c7bcc18cd97a4a4cb6b6f235b 128 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 128 73.447 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 JE55_RS13240 28420c7c7bcc18cd97a4a4cb6b6f235b 128 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 1.1E-53 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 JE55_RS07225 53266f73ac14b12530fecb54b661f949 215 SUPERFAMILY SSF46626 127 213 8.45E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS07225 53266f73ac14b12530fecb54b661f949 215 Gene3D G3DSA:1.10.760.10 149 215 1.2E-27 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS07225 53266f73ac14b12530fecb54b661f949 215 PANTHER PTHR33751 21 215 5.5E-52 T 22-04-2016 JE55_RS07225 53266f73ac14b12530fecb54b661f949 215 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 148 211 8.8E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS07225 53266f73ac14b12530fecb54b661f949 215 PIRSF PIRSF000005 1 215 8.0E-65 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 JE55_RS07225 53266f73ac14b12530fecb54b661f949 215 Gene3D G3DSA:1.10.760.10 37 148 5.3E-32 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS07225 53266f73ac14b12530fecb54b661f949 215 SUPERFAMILY SSF46626 36 130 1.26E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS07225 53266f73ac14b12530fecb54b661f949 215 PANTHER PTHR33751:SF3 21 215 5.5E-52 T 22-04-2016 JE55_RS07225 53266f73ac14b12530fecb54b661f949 215 PRINTS PR00605 Class IC cytochrome C signature 44 55 6.9E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 JE55_RS07225 53266f73ac14b12530fecb54b661f949 215 PRINTS PR00605 Class IC cytochrome C signature 189 211 6.9E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 JE55_RS07225 53266f73ac14b12530fecb54b661f949 215 Pfam PF00034 Cytochrome c 36 114 2.3E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 SUPERFAMILY SSF111369 104 158 1.44E-5 T 22-04-2016 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 ProSitePatterns PS00543 HlyD family secretion proteins signature. 433 455 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 55 469 2.3E-108 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 353 1.0E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 365 389 1.0E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 107 127 1.0E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 433 448 1.0E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 65 88 1.0E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 448 468 1.0E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 389 412 1.0E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 PANTHER PTHR30386 53 150 1.1E-102 T 22-04-2016 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 PANTHER PTHR30386 179 469 1.1E-102 T 22-04-2016 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 SUPERFAMILY SSF111369 264 443 2.09E-5 T 22-04-2016 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 Pfam PF13437 HlyD family secretion protein 320 419 1.9E-14 T 22-04-2016 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 PANTHER PTHR30386:SF4 53 150 1.1E-102 T 22-04-2016 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 PANTHER PTHR30386:SF4 179 469 1.1E-102 T 22-04-2016 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 Pfam PF13533 Biotin-lipoyl like 104 137 1.2E-7 T 22-04-2016 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 Gene3D G3DSA:2.40.50.100 317 352 6.1E-16 T 22-04-2016 JE55_RS17580 7658273e2b7a01092cc3a19846ff0c6d 469 Gene3D G3DSA:2.40.50.100 100 129 6.1E-16 T 22-04-2016 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SMART SM00028 205 238 2.6E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SMART SM00028 273 306 1.6E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SMART SM00028 239 272 1.1E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SMART SM00028 171 204 9.8E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SMART SM00028 103 136 7.4E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SMART SM00028 69 102 3.7E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SMART SM00028 35 68 2.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SMART SM00028 137 170 1.1E-8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SMART SM00028 1 34 55.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SUPERFAMILY SSF53756 357 597 3.77E-21 T 22-04-2016 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 Pfam PF13424 Tetratricopeptide repeat 105 167 1.1E-11 T 22-04-2016 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 Gene3D G3DSA:3.40.50.2000 454 595 2.8E-12 T 22-04-2016 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 PANTHER PTHR23083 13 336 2.0E-79 T 22-04-2016 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 Pfam PF13432 Tetratricopeptide repeat 210 270 3.5E-8 T 22-04-2016 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 512 565 3.1E-5 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SUPERFAMILY SSF48452 7 177 5.5E-38 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 Pfam PF00515 Tetratricopeptide repeat 274 305 8.8E-8 T 22-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 Gene3D G3DSA:1.25.40.10 4 120 9.1E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 Gene3D G3DSA:1.25.40.10 121 221 1.1E-35 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 Gene3D G3DSA:1.25.40.10 222 331 6.9E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 SUPERFAMILY SSF48452 137 323 5.35E-38 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 Pfam PF14559 Tetratricopeptide repeat 47 90 1.3E-6 T 22-04-2016 JE55_RS03685 11f57b607ae09512ba676d8caa0b21c9 614 Pfam PF07719 Tetratricopeptide repeat 172 203 9.7E-6 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 JE55_RS16090 d220b65088e72be7080a25ffc780e5d7 369 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS16090 d220b65088e72be7080a25ffc780e5d7 369 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 35.924 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS16090 d220b65088e72be7080a25ffc780e5d7 369 Gene3D G3DSA:3.60.150.10 9 353 2.4E-152 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS16090 d220b65088e72be7080a25ffc780e5d7 369 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS16090 d220b65088e72be7080a25ffc780e5d7 369 PANTHER PTHR21085 2 366 5.1E-200 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS16090 d220b65088e72be7080a25ffc780e5d7 369 Pfam PF01264 Chorismate synthase 10 345 3.6E-134 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS16090 d220b65088e72be7080a25ffc780e5d7 369 SUPERFAMILY SSF103263 4 351 4.45E-144 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS16090 d220b65088e72be7080a25ffc780e5d7 369 PIRSF PIRSF001456 3 364 1.4E-133 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS16090 d220b65088e72be7080a25ffc780e5d7 369 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.4E-138 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS16090 d220b65088e72be7080a25ffc780e5d7 369 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS14010 3adaffb1b7a0f24cbd1e1dc5f9b65ee9 462 TIGRFAM TIGR03173 pbuX: xanthine permease 40 459 3.8E-126 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 JE55_RS14010 3adaffb1b7a0f24cbd1e1dc5f9b65ee9 462 PANTHER PTHR11119:SF44 16 462 3.5E-230 T 22-04-2016 JE55_RS14010 3adaffb1b7a0f24cbd1e1dc5f9b65ee9 462 Pfam PF00860 Permease family 36 428 7.3E-92 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS14010 3adaffb1b7a0f24cbd1e1dc5f9b65ee9 462 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 34 455 1.9E-117 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 JE55_RS14010 3adaffb1b7a0f24cbd1e1dc5f9b65ee9 462 PANTHER PTHR11119 16 462 3.5E-230 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS14010 3adaffb1b7a0f24cbd1e1dc5f9b65ee9 462 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 JE55_RS10370 cc9a8784d69a03a627f9b9a47822fa49 212 Gene3D G3DSA:3.40.30.10 28 210 4.2E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10370 cc9a8784d69a03a627f9b9a47822fa49 212 SUPERFAMILY SSF52833 26 206 4.51E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10370 cc9a8784d69a03a627f9b9a47822fa49 212 Pfam PF01323 DSBA-like thioredoxin domain 50 183 3.8E-14 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 JE55_RS10370 cc9a8784d69a03a627f9b9a47822fa49 212 PANTHER PTHR35891 1 211 2.2E-50 T 22-04-2016 JE55_RS10370 cc9a8784d69a03a627f9b9a47822fa49 212 PANTHER PTHR35891:SF2 1 211 2.2E-50 T 22-04-2016 JE55_RS10370 cc9a8784d69a03a627f9b9a47822fa49 212 ProSitePatterns PS00194 Thioredoxin family active site. 50 68 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 JE55_RS10370 cc9a8784d69a03a627f9b9a47822fa49 212 PIRSF PIRSF001488 1 211 8.2E-53 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL JE55_RS04760 e3c7a48409fc7494ec893acc8fb2d6bb 395 SUPERFAMILY SSF56645 6 240 7.85E-78 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS04760 e3c7a48409fc7494ec893acc8fb2d6bb 395 PANTHER PTHR10909:SF307 1 394 2.4E-269 T 22-04-2016 JE55_RS04760 e3c7a48409fc7494ec893acc8fb2d6bb 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 131 6.9E-34 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS04760 e3c7a48409fc7494ec893acc8fb2d6bb 395 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 387 1.1E-28 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS04760 e3c7a48409fc7494ec893acc8fb2d6bb 395 Gene3D G3DSA:1.10.540.10 4 133 2.1E-42 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS04760 e3c7a48409fc7494ec893acc8fb2d6bb 395 PANTHER PTHR10909 1 394 2.4E-269 T 22-04-2016 JE55_RS04760 e3c7a48409fc7494ec893acc8fb2d6bb 395 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 347 366 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JE55_RS04760 e3c7a48409fc7494ec893acc8fb2d6bb 395 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 228 1.1E-19 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS04760 e3c7a48409fc7494ec893acc8fb2d6bb 395 Gene3D G3DSA:2.40.110.10 134 229 8.6E-32 T 22-04-2016 JE55_RS04760 e3c7a48409fc7494ec893acc8fb2d6bb 395 Gene3D G3DSA:1.20.140.10 230 390 1.1E-44 T 22-04-2016 JE55_RS04760 e3c7a48409fc7494ec893acc8fb2d6bb 395 SUPERFAMILY SSF47203 245 392 1.51E-42 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS15130 0a3cd731191d7b80dd50c73fdafb940c 293 SUPERFAMILY SSF53474 13 292 2.63E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS15130 0a3cd731191d7b80dd50c73fdafb940c 293 PIRSF PIRSF037442 1 293 1.7E-92 T 22-04-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 JE55_RS15130 0a3cd731191d7b80dd50c73fdafb940c 293 Pfam PF12146 Serine aminopeptidase, S33 51 132 5.1E-9 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 JE55_RS15130 0a3cd731191d7b80dd50c73fdafb940c 293 Gene3D G3DSA:3.40.50.1820 6 292 2.6E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS15130 0a3cd731191d7b80dd50c73fdafb940c 293 PANTHER PTHR11614:SF82 1 291 7.6E-38 T 22-04-2016 JE55_RS15130 0a3cd731191d7b80dd50c73fdafb940c 293 PANTHER PTHR11614 1 291 7.6E-38 T 22-04-2016 JE55_RS13735 37ec6fcdabdc30f8f3ed190f99857583 302 SUPERFAMILY SSF103481 185 286 5.56E-10 T 22-04-2016 JE55_RS13735 37ec6fcdabdc30f8f3ed190f99857583 302 PANTHER PTHR12715 1 291 5.8E-73 T 22-04-2016 JE55_RS13735 37ec6fcdabdc30f8f3ed190f99857583 302 Pfam PF00892 EamA-like transporter family 149 286 4.1E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS13735 37ec6fcdabdc30f8f3ed190f99857583 302 Pfam PF00892 EamA-like transporter family 7 131 1.1E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS13735 37ec6fcdabdc30f8f3ed190f99857583 302 SUPERFAMILY SSF103481 52 142 1.44E-11 T 22-04-2016 JE55_RS13735 37ec6fcdabdc30f8f3ed190f99857583 302 PANTHER PTHR12715:SF9 1 291 5.8E-73 T 22-04-2016 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 PANTHER PTHR12383:SF27 228 293 3.1E-86 T 22-04-2016 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 PANTHER PTHR12383:SF27 1 203 3.1E-86 T 22-04-2016 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 78 287 7.3E-54 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 Pfam PF10502 Signal peptidase, peptidase S26 246 284 1.5E-6 T 22-04-2016 IPR019533 Peptidase S26 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 SUPERFAMILY SSF51306 91 293 2.33E-72 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 Gene3D G3DSA:2.10.109.10 89 167 7.2E-58 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 Gene3D G3DSA:2.10.109.10 247 293 7.2E-58 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 PANTHER PTHR12383 228 293 3.1E-86 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 PANTHER PTHR12383 1 203 3.1E-86 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 247 266 7.1E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 93 109 7.1E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 157 169 7.1E-26 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 Pfam PF00717 Peptidase S24-like 99 181 2.3E-22 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 ProSitePatterns PS00761 Signal peptidases I signature 3. 252 265 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 ProSitePatterns PS00760 Signal peptidases I lysine active site. 159 171 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 JE55_RS03125 79945d14cf8916fac8a34e0ac2e9c9f4 297 ProSitePatterns PS00501 Signal peptidases I serine active site. 102 109 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 Pfam PF00384 Molybdopterin oxidoreductase 84 509 1.7E-82 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 Pfam PF04324 BFD-like [2Fe-2S] binding domain 886 941 8.9E-8 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 19 72 3.3E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 SUPERFAMILY SSF50692 581 734 2.71E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 SMART SM00926 18 77 1.3E-18 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 PANTHER PTHR11615:SF119 19 751 2.4E-240 T 22-04-2016 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 Gene3D G3DSA:3.40.228.10 162 346 8.9E-63 T 22-04-2016 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 Gene3D G3DSA:2.20.25.90 18 73 9.7E-19 T 22-04-2016 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 457 474 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 SUPERFAMILY SSF53706 12 597 1.83E-186 T 22-04-2016 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 PANTHER PTHR11615 19 751 2.4E-240 T 22-04-2016 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 23 41 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 Gene3D G3DSA:2.40.40.20 601 733 1.2E-39 T 22-04-2016 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 Pfam PF01568 Molydopterin dinucleotide binding domain 610 727 3.8E-27 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 Gene3D G3DSA:3.40.50.740 84 161 1.4E-89 T 22-04-2016 JE55_RS11050 314f15383d535d6c3ba047c6182693d9 951 Gene3D G3DSA:3.40.50.740 347 592 1.4E-89 T 22-04-2016 JE55_RS02630 edd348caceb18eb4c761cfbdf16aa1cb 296 Gene3D G3DSA:1.10.287.90 28 113 9.8E-36 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 JE55_RS02630 edd348caceb18eb4c761cfbdf16aa1cb 296 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 19 238 6.8E-114 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 JE55_RS02630 edd348caceb18eb4c761cfbdf16aa1cb 296 Pfam PF06481 COX Aromatic Rich Motif 238 283 3.8E-19 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 JE55_RS02630 edd348caceb18eb4c761cfbdf16aa1cb 296 Gene3D G3DSA:2.60.40.420 114 278 8.6E-42 T 22-04-2016 IPR008972 Cupredoxin JE55_RS02630 edd348caceb18eb4c761cfbdf16aa1cb 296 PANTHER PTHR22888 12 266 2.6E-132 T 22-04-2016 JE55_RS02630 edd348caceb18eb4c761cfbdf16aa1cb 296 PIRSF PIRSF000292 1 295 3.7E-131 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 JE55_RS02630 edd348caceb18eb4c761cfbdf16aa1cb 296 SUPERFAMILY SSF49503 119 279 2.86E-51 T 22-04-2016 IPR008972 Cupredoxin JE55_RS02630 edd348caceb18eb4c761cfbdf16aa1cb 296 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 151 218 1.9E-6 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 JE55_RS02630 edd348caceb18eb4c761cfbdf16aa1cb 296 PANTHER PTHR22888:SF13 12 266 2.6E-132 T 22-04-2016 JE55_RS02630 edd348caceb18eb4c761cfbdf16aa1cb 296 SUPERFAMILY SSF81464 28 117 9.81E-24 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 SMART SM00388 213 278 6.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 Gene3D G3DSA:1.10.287.130 205 274 1.2E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 Pfam PF00672 HAMP domain 141 208 2.0E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 374 2.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 433 2.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 414 2.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 388 2.2E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 PANTHER PTHR24423 154 433 2.8E-70 T 22-04-2016 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 PANTHER PTHR24423 2 10 2.8E-70 T 22-04-2016 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 SUPERFAMILY SSF47384 196 278 1.77E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 Gene3D G3DSA:3.30.565.10 283 434 3.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 278 2.7E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 323 432 1.2E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 PANTHER PTHR24423:SF474 2 10 2.8E-70 T 22-04-2016 JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 SMART SM00387 322 436 5.7E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 SUPERFAMILY SSF55874 268 434 3.41E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12325 ab8e8a76d91ef7c4b665fff61cdb2147 438 PANTHER PTHR24423:SF474 154 433 2.8E-70 T 22-04-2016 JE55_RS14150 affb67e619fa3b9c05d4049eb8b28fb8 242 Gene3D G3DSA:1.10.10.200 1 79 3.9E-35 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like JE55_RS14150 affb67e619fa3b9c05d4049eb8b28fb8 242 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 35.921 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like JE55_RS14150 affb67e619fa3b9c05d4049eb8b28fb8 242 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.2E-96 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like JE55_RS14150 affb67e619fa3b9c05d4049eb8b28fb8 242 Pfam PF01709 Transcriptional regulator 5 237 5.8E-96 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like JE55_RS14150 affb67e619fa3b9c05d4049eb8b28fb8 242 PANTHER PTHR12532 1 241 1.4E-111 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like JE55_RS14150 affb67e619fa3b9c05d4049eb8b28fb8 242 SUPERFAMILY SSF75625 3 238 3.53E-97 T 22-04-2016 IPR029072 YebC-like JE55_RS14150 affb67e619fa3b9c05d4049eb8b28fb8 242 Gene3D G3DSA:3.30.70.980 135 205 3.7E-29 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 JE55_RS14150 affb67e619fa3b9c05d4049eb8b28fb8 242 Gene3D G3DSA:3.30.1270.10 82 134 1.3E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 JE55_RS14150 affb67e619fa3b9c05d4049eb8b28fb8 242 Gene3D G3DSA:3.30.1270.10 212 240 1.3E-38 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 JE55_RS02830 eccd9585caa42f0534bd6d0309f9fec7 302 Gene3D G3DSA:3.40.190.10 94 179 3.0E-13 T 22-04-2016 JE55_RS02830 eccd9585caa42f0534bd6d0309f9fec7 302 SUPERFAMILY SSF53850 89 299 1.23E-33 T 22-04-2016 JE55_RS02830 eccd9585caa42f0534bd6d0309f9fec7 302 Gene3D G3DSA:1.10.10.10 3 83 3.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02830 eccd9585caa42f0534bd6d0309f9fec7 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.6E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS02830 eccd9585caa42f0534bd6d0309f9fec7 302 Gene3D G3DSA:3.40.190.10 180 264 1.4E-19 T 22-04-2016 JE55_RS02830 eccd9585caa42f0534bd6d0309f9fec7 302 PANTHER PTHR30537 1 297 4.7E-164 T 22-04-2016 JE55_RS02830 eccd9585caa42f0534bd6d0309f9fec7 302 SUPERFAMILY SSF46785 3 83 4.61E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02830 eccd9585caa42f0534bd6d0309f9fec7 302 Pfam PF03466 LysR substrate binding domain 88 296 2.7E-32 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS02830 eccd9585caa42f0534bd6d0309f9fec7 302 PANTHER PTHR30537:SF29 1 297 4.7E-164 T 22-04-2016 JE55_RS10040 37110f72a5f3309b7420033ba7ecc3f5 302 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 31 55 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JE55_RS10040 37110f72a5f3309b7420033ba7ecc3f5 302 Pfam PF00294 pfkB family carbohydrate kinase 23 291 7.1E-44 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB JE55_RS10040 37110f72a5f3309b7420033ba7ecc3f5 302 SUPERFAMILY SSF53613 8 299 1.56E-59 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS10040 37110f72a5f3309b7420033ba7ecc3f5 302 PANTHER PTHR10584:SF161 9 301 1.2E-67 T 22-04-2016 JE55_RS10040 37110f72a5f3309b7420033ba7ecc3f5 302 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 244 257 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JE55_RS10040 37110f72a5f3309b7420033ba7ecc3f5 302 PANTHER PTHR10584 9 301 1.2E-67 T 22-04-2016 JE55_RS10040 37110f72a5f3309b7420033ba7ecc3f5 302 Gene3D G3DSA:3.40.1190.20 8 301 2.4E-60 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS13190 799c07573ef34c62aa2b382ba027f0a4 252 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 252 51.621 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 JE55_RS13190 799c07573ef34c62aa2b382ba027f0a4 252 Pfam PF02654 Cobalamin-5-phosphate synthase 13 243 5.4E-50 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 JE55_RS13190 799c07573ef34c62aa2b382ba027f0a4 252 PANTHER PTHR34148 1 252 1.6E-52 T 22-04-2016 JE55_RS13190 799c07573ef34c62aa2b382ba027f0a4 252 PANTHER PTHR34148:SF1 1 252 1.6E-52 T 22-04-2016 JE55_RS09375 87e35b292d6fe50c32a6eed7e7717b92 230 SUPERFAMILY SSF46689 25 99 1.36E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS09375 87e35b292d6fe50c32a6eed7e7717b92 230 Gene3D G3DSA:1.10.357.10 26 229 1.6E-52 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS09375 87e35b292d6fe50c32a6eed7e7717b92 230 PANTHER PTHR30055:SF58 20 228 2.7E-54 T 22-04-2016 JE55_RS09375 87e35b292d6fe50c32a6eed7e7717b92 230 Pfam PF00440 Bacterial regulatory proteins, tetR family 54 82 1.5E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS09375 87e35b292d6fe50c32a6eed7e7717b92 230 PANTHER PTHR30055 20 228 2.7E-54 T 22-04-2016 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 Gene3D G3DSA:3.30.450.20 426 561 4.6E-6 T 22-04-2016 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 SUPERFAMILY SSF47384 560 635 2.16E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 Pfam PF05226 CHASE2 domain 33 317 2.9E-53 T 22-04-2016 IPR007890 CHASE2 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 Gene3D G3DSA:1.10.287.130 562 631 4.2E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 682 791 5.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 Gene3D G3DSA:3.30.565.10 635 793 5.9E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 SMART SM01080 40 325 1.0E-75 T 22-04-2016 IPR007890 CHASE2 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 PANTHER PTHR24423 433 500 3.9E-55 T 22-04-2016 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 PANTHER PTHR24423 522 791 3.9E-55 T 22-04-2016 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 PANTHER PTHR24423 4 23 3.9E-55 T 22-04-2016 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 SMART SM00387 679 793 1.9E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 777 790 2.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 718 732 2.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 736 746 2.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 PRINTS PR00344 Bacterial sensor protein C-terminal signature 753 771 2.6E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 SUPERFAMILY SSF55785 425 562 2.09E-5 T 22-04-2016 IPR000014 PAS domain JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 SUPERFAMILY SSF55874 625 791 5.63E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15970 2fb75ce25d140f08dbe3b2d3ac6b2265 797 PIRSF PIRSF037347 1 796 0.0 T 22-04-2016 IPR017181 Signal transduction histidine kinase, CHASE2/PAS sensor domain-containing, predicted JE55_RS05395 02c34244ca28dee348a1e96489d23294 394 Gene3D G3DSA:3.20.20.105 18 389 1.7E-166 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS05395 02c34244ca28dee348a1e96489d23294 394 Pfam PF01702 Queuine tRNA-ribosyltransferase 146 385 3.2E-91 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS05395 02c34244ca28dee348a1e96489d23294 394 SUPERFAMILY SSF51713 20 387 1.1E-156 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS05395 02c34244ca28dee348a1e96489d23294 394 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 22 389 3.2E-155 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS05395 02c34244ca28dee348a1e96489d23294 394 PANTHER PTHR21148:SF26 14 391 1.0E-172 T 22-04-2016 JE55_RS05395 02c34244ca28dee348a1e96489d23294 394 PANTHER PTHR21148 14 391 1.0E-172 T 22-04-2016 JE55_RS05395 02c34244ca28dee348a1e96489d23294 394 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 22 389 2.0E-163 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS05395 02c34244ca28dee348a1e96489d23294 394 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 20 383 56.053 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS02605 6d3660ee94b3ea978df3d0a3ef74c922 182 SUPERFAMILY SSF117916 86 181 2.06E-25 T 22-04-2016 JE55_RS02605 6d3660ee94b3ea978df3d0a3ef74c922 182 PANTHER PTHR13696 19 180 1.2E-33 T 22-04-2016 JE55_RS02605 6d3660ee94b3ea978df3d0a3ef74c922 182 PANTHER PTHR13696:SF62 19 180 1.2E-33 T 22-04-2016 JE55_RS02605 6d3660ee94b3ea978df3d0a3ef74c922 182 Pfam PF01883 Domain of unknown function DUF59 86 159 1.1E-16 T 22-04-2016 IPR002744 Domain of unknown function DUF59 JE55_RS02605 6d3660ee94b3ea978df3d0a3ef74c922 182 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 8 182 3.2E-73 T 22-04-2016 IPR017776 FeS assembly SUF system protein SufT, putative JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PANTHER PTHR22912:SF135 1 449 1.0E-197 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 3 446 1.3E-186 T 22-04-2016 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PIRSF PIRSF000350 1 443 2.0E-86 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 4.6E-65 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 Gene3D G3DSA:3.50.50.60 142 269 1.3E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PANTHER PTHR22912 1 449 1.0E-197 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 SUPERFAMILY SSF51905 2 363 7.34E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 SUPERFAMILY SSF55424 334 447 1.1E-35 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 337 445 1.4E-36 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 7.1E-66 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 333 354 7.1E-66 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 7.1E-66 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.1E-66 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 7.1E-66 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 7.1E-66 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.1E-66 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 398 413 7.1E-66 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 420 440 7.1E-66 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 Gene3D G3DSA:3.30.390.30 337 448 1.6E-45 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 2.9E-28 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 2.9E-28 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 2.9E-28 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 2.9E-28 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.9E-28 T 22-04-2016 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 Gene3D G3DSA:3.50.50.60 270 330 2.1E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS09915 c94e1d1b3c1e95738a0c82e1552bee82 453 Gene3D G3DSA:3.50.50.60 3 141 2.1E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS12255 b8edb0d1f5170930a010c2a6193e49fe 307 PANTHER PTHR11825 10 306 2.2E-115 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 JE55_RS12255 b8edb0d1f5170930a010c2a6193e49fe 307 ProSitePatterns PS00770 Aminotransferases class-IV signature. 195 223 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 JE55_RS12255 b8edb0d1f5170930a010c2a6193e49fe 307 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 307 5.3E-137 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 JE55_RS12255 b8edb0d1f5170930a010c2a6193e49fe 307 SUPERFAMILY SSF56752 1 304 1.09E-106 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 JE55_RS12255 b8edb0d1f5170930a010c2a6193e49fe 307 Pfam PF01063 Amino-transferase class IV 36 267 2.9E-60 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 JE55_RS12255 b8edb0d1f5170930a010c2a6193e49fe 307 PANTHER PTHR11825:SF7 10 306 2.2E-115 T 22-04-2016 JE55_RS12255 b8edb0d1f5170930a010c2a6193e49fe 307 Gene3D G3DSA:3.30.470.10 8 131 1.6E-42 T 22-04-2016 JE55_RS12255 b8edb0d1f5170930a010c2a6193e49fe 307 Gene3D G3DSA:3.20.10.10 135 296 3.2E-60 T 22-04-2016 JE55_RS17500 6682d0dcad0ff0fac2eb5309b84ccccf 181 Pfam PF08281 Sigma-70, region 4 121 173 1.2E-12 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS17500 6682d0dcad0ff0fac2eb5309b84ccccf 181 Pfam PF04542 Sigma-70 region 2 27 95 2.8E-11 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS17500 6682d0dcad0ff0fac2eb5309b84ccccf 181 SUPERFAMILY SSF88946 10 113 2.35E-17 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS17500 6682d0dcad0ff0fac2eb5309b84ccccf 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 174 2.6E-19 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS17500 6682d0dcad0ff0fac2eb5309b84ccccf 181 Gene3D G3DSA:1.10.10.10 118 177 3.0E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17500 6682d0dcad0ff0fac2eb5309b84ccccf 181 Gene3D G3DSA:1.10.1740.10 17 115 1.3E-17 T 22-04-2016 JE55_RS17500 6682d0dcad0ff0fac2eb5309b84ccccf 181 SUPERFAMILY SSF88659 118 176 1.14E-11 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS17500 6682d0dcad0ff0fac2eb5309b84ccccf 181 PANTHER PTHR30173:SF3 1 177 4.6E-36 T 22-04-2016 JE55_RS17500 6682d0dcad0ff0fac2eb5309b84ccccf 181 PANTHER PTHR30173 1 177 4.6E-36 T 22-04-2016 JE55_RS03550 7ddd37e7f8576f979b54fe758c58cf9f 300 Gene3D G3DSA:3.40.50.1100 46 146 1.6E-38 T 22-04-2016 JE55_RS03550 7ddd37e7f8576f979b54fe758c58cf9f 300 TIGRFAM TIGR01138 cysM: cysteine synthase B 5 298 7.1E-135 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 JE55_RS03550 7ddd37e7f8576f979b54fe758c58cf9f 300 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 287 1.6E-63 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS03550 7ddd37e7f8576f979b54fe758c58cf9f 300 PANTHER PTHR10314:SF100 1 298 1.4E-161 T 22-04-2016 JE55_RS03550 7ddd37e7f8576f979b54fe758c58cf9f 300 TIGRFAM TIGR01136 cysKM: cysteine synthase 6 298 1.7E-116 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 JE55_RS03550 7ddd37e7f8576f979b54fe758c58cf9f 300 PANTHER PTHR10314 1 298 1.4E-161 T 22-04-2016 JE55_RS03550 7ddd37e7f8576f979b54fe758c58cf9f 300 SUPERFAMILY SSF53686 2 298 1.96E-87 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS03550 7ddd37e7f8576f979b54fe758c58cf9f 300 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 JE55_RS03550 7ddd37e7f8576f979b54fe758c58cf9f 300 Gene3D G3DSA:3.40.50.1100 1 45 1.7E-80 T 22-04-2016 JE55_RS03550 7ddd37e7f8576f979b54fe758c58cf9f 300 Gene3D G3DSA:3.40.50.1100 152 299 1.7E-80 T 22-04-2016 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 Gene3D G3DSA:3.40.50.1370 145 320 5.0E-67 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 SUPERFAMILY SSF53671 4 335 9.82E-97 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PANTHER PTHR11405:SF44 299 334 5.8E-193 T 22-04-2016 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PANTHER PTHR11405:SF44 1 277 5.8E-193 T 22-04-2016 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 334 80.11 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 312 323 3.5E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 3.5E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 3.5E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 3.5E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 3.5E-30 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 Gene3D G3DSA:3.40.50.1370 3 144 4.9E-54 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 298 321 2.4E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 7.8E-45 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PANTHER PTHR11405 299 334 5.8E-193 T 22-04-2016 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 PANTHER PTHR11405 1 277 5.8E-193 T 22-04-2016 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 331 2.0E-50 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JE55_RS17275 691fd721867cf8ba872257c508ce8b98 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 333 4.4E-128 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS24425 aec0ddfb3341956d6b1791f747b9cce0 448 SUPERFAMILY SSF52540 353 448 2.73E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS24425 aec0ddfb3341956d6b1791f747b9cce0 448 Gene3D G3DSA:3.40.50.300 357 448 3.8E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS24425 aec0ddfb3341956d6b1791f747b9cce0 448 Pfam PF00005 ABC transporter 374 446 1.1E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS24425 aec0ddfb3341956d6b1791f747b9cce0 448 Pfam PF00664 ABC transporter transmembrane region 42 304 1.3E-42 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS24425 aec0ddfb3341956d6b1791f747b9cce0 448 PANTHER PTHR24221 15 448 4.3E-85 T 22-04-2016 JE55_RS24425 aec0ddfb3341956d6b1791f747b9cce0 448 Gene3D G3DSA:1.20.1560.10 36 332 9.2E-68 T 22-04-2016 JE55_RS24425 aec0ddfb3341956d6b1791f747b9cce0 448 SUPERFAMILY SSF90123 27 332 2.75E-60 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 PANTHER PTHR32089:SF63 67 81 3.1E-124 T 22-04-2016 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 PANTHER PTHR32089:SF63 286 554 3.1E-124 T 22-04-2016 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 Pfam PF12729 Four helix bundle sensory module for signal transduction 36 173 1.3E-10 T 22-04-2016 IPR024478 4HB MCP domain JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 SMART SM00283 304 551 4.3E-86 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 Gene3D G3DSA:1.10.287.950 322 523 7.8E-57 T 22-04-2016 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 364 550 2.9E-58 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 SUPERFAMILY SSF58104 284 552 5.36E-67 T 22-04-2016 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 PANTHER PTHR32089 67 81 3.1E-124 T 22-04-2016 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 PANTHER PTHR32089 286 554 3.1E-124 T 22-04-2016 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 225 245 9.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 479 508 9.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 325 354 9.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 402 429 9.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS16005 643267e93c8a2e9e3be4e084eeb41de5 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 431 460 9.2E-58 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:1.10.1200.10 1653 1714 1.6E-25 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:1.10.1200.10 3207 3271 3.7E-24 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:1.10.1200.10 546 616 3.0E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1673 1688 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:2.30.38.10 1448 1528 3.4E-24 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:2.30.38.10 3012 3088 9.0E-26 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:2.30.38.10 331 409 1.1E-16 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF13193 AMP-binding enzyme C-terminal domain 1546 1620 2.3E-8 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF13193 AMP-binding enzyme C-terminal domain 428 515 1.8E-7 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF13193 AMP-binding enzyme C-terminal domain 3107 3177 1.2E-7 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF00501 AMP-binding enzyme 2679 3099 3.8E-96 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF00501 AMP-binding enzyme 1121 1538 1.6E-80 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF00501 AMP-binding enzyme 18 420 9.1E-75 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1142 1560 9.8E-112 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 38 443 3.1E-109 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2710 3123 1.1E-133 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF52777 2397 2658 3.34E-47 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF00668 Condensation domain 663 961 1.9E-64 T 22-04-2016 IPR001242 Condensation domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF00668 Condensation domain 1740 2040 9.6E-38 T 22-04-2016 IPR001242 Condensation domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF00668 Condensation domain 2214 2514 1.0E-55 T 22-04-2016 IPR001242 Condensation domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF56801 2636 3209 3.4E-152 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:3.30.300.30 3095 3206 2.2E-33 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:3.30.300.30 415 545 9.1E-29 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:3.30.300.30 1533 1652 2.9E-34 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 PANTHER PTHR24095 1449 1704 0.0 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 PANTHER PTHR24095 2154 2167 0.0 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 PANTHER PTHR24095 2190 3177 0.0 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 PANTHER PTHR24095 187 1432 0.0 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF56801 1117 1661 4.32E-134 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:3.40.50.980 2676 2851 9.8E-45 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:3.40.50.980 1118 1273 2.0E-38 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF47336 1643 1711 3.01E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2046 2204 1.6E-30 T 22-04-2016 IPR010060 Non-ribosomal peptide synthase JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF52777 2218 2395 3.22E-40 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF52777 1741 1912 5.34E-33 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2838 2849 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1268 1279 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 ProSitePatterns PS00455 Putative AMP-binding domain signature. 156 167 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF00550 Phosphopantetheine attachment site 546 610 1.4E-4 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF00550 Phosphopantetheine attachment site 1651 1711 1.8E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF00550 Phosphopantetheine attachment site 3203 3266 3.3E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF47336 538 610 3.93E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:3.40.50.980 6 163 5.4E-33 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:3.40.50.980 1274 1426 1.3E-34 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:3.40.50.980 164 313 3.0E-38 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF56801 5 556 2.49E-126 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF52777 1926 2175 3.11E-31 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF52777 665 842 1.11E-43 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SMART SM00823 Phosphopantetheine attachment site 544 614 0.15 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SMART SM00823 Phosphopantetheine attachment site 1649 1717 2.0E-4 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF52777 848 1089 2.89E-44 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Gene3D G3DSA:3.40.50.980 2857 3011 2.9E-45 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 PANTHER PTHR24095:SF173 1449 1704 0.0 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 PANTHER PTHR24095:SF173 2154 2167 0.0 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 PANTHER PTHR24095:SF173 2190 3177 0.0 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 PANTHER PTHR24095:SF173 187 1432 0.0 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 Pfam PF13745 HxxPF-repeated domain 983 1071 9.6E-11 T 22-04-2016 JE55_RS17085 650c30cd59547daefa92685ffdddbad9 3292 SUPERFAMILY SSF47336 3195 3266 9.29E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS03705 b8b0e2171545bbcb06eb4d9ee127e3cc 169 Pfam PF02600 Disulfide bond formation protein DsbB 12 158 1.5E-36 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 JE55_RS03705 b8b0e2171545bbcb06eb4d9ee127e3cc 169 Gene3D G3DSA:1.20.1550.10 1 167 4.6E-53 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain JE55_RS03705 b8b0e2171545bbcb06eb4d9ee127e3cc 169 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 19.977 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB JE55_RS03705 b8b0e2171545bbcb06eb4d9ee127e3cc 169 PANTHER PTHR36570 10 169 2.3E-20 T 22-04-2016 JE55_RS03705 b8b0e2171545bbcb06eb4d9ee127e3cc 169 SUPERFAMILY SSF158442 16 158 9.42E-36 T 22-04-2016 JE55_RS07530 ceb744e9c4c356df5f86894e0dbc406e 267 PANTHER PTHR30458 9 267 6.0E-87 T 22-04-2016 JE55_RS07530 ceb744e9c4c356df5f86894e0dbc406e 267 Gene3D G3DSA:1.20.1260.10 6 267 2.3E-91 T 22-04-2016 IPR012347 Ferritin-related JE55_RS07530 ceb744e9c4c356df5f86894e0dbc406e 267 PIRSF PIRSF037834 1 267 6.3E-98 T 22-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 JE55_RS07530 ceb744e9c4c356df5f86894e0dbc406e 267 Pfam PF05138 Phenylacetic acid catabolic protein 4 267 1.8E-90 T 22-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 JE55_RS07530 ceb744e9c4c356df5f86894e0dbc406e 267 SUPERFAMILY SSF47240 7 261 7.3E-73 T 22-04-2016 IPR009078 Ferritin-like superfamily JE55_RS07530 ceb744e9c4c356df5f86894e0dbc406e 267 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 14 267 3.3E-83 T 22-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 JE55_RS07530 ceb744e9c4c356df5f86894e0dbc406e 267 PANTHER PTHR30458:SF1 9 267 6.0E-87 T 22-04-2016 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 SUPERFAMILY SSF54292 1 89 5.37E-26 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 7.1E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 Gene3D G3DSA:3.40.50.80 201 335 6.2E-41 T 22-04-2016 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 SUPERFAMILY SSF63380 102 199 5.91E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 Gene3D G3DSA:2.40.30.10 101 199 1.6E-32 T 22-04-2016 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PANTHER PTHR19370 32 333 2.0E-70 T 22-04-2016 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 300 308 2.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 2.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 208 227 2.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 233 242 2.7E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PANTHER PTHR19370:SF68 32 333 2.0E-70 T 22-04-2016 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 Pfam PF00970 Oxidoreductase FAD-binding domain 105 197 9.4E-18 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 SUPERFAMILY SSF52343 200 334 2.88E-39 T 22-04-2016 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 Pfam PF00175 Oxidoreductase NAD-binding domain 209 314 9.3E-22 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 5.0E-21 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 5.0E-21 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 5.0E-21 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 5.0E-21 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 5.0E-21 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 5.0E-21 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 JE55_RS12985 df4c718394c13addea69296aa6b3541e 343 Gene3D G3DSA:3.10.20.30 2 96 5.7E-29 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 Pfam PF07676 WD40-like Beta Propeller Repeat 372 398 0.0091 T 22-04-2016 IPR011659 WD40-like Beta Propeller JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 Pfam PF07676 WD40-like Beta Propeller Repeat 237 269 5.2E-8 T 22-04-2016 IPR011659 WD40-like Beta Propeller JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 Pfam PF07676 WD40-like Beta Propeller Repeat 278 314 2.4E-15 T 22-04-2016 IPR011659 WD40-like Beta Propeller JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 Pfam PF07676 WD40-like Beta Propeller Repeat 326 361 1.5E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 Pfam PF07676 WD40-like Beta Propeller Repeat 195 218 0.0024 T 22-04-2016 IPR011659 WD40-like Beta Propeller JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 19 429 7.3E-142 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 Gene3D G3DSA:2.130.10.10 156 430 8.0E-71 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 SUPERFAMILY SSF52964 33 162 5.89E-32 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 PANTHER PTHR11731:SF123 17 122 9.0E-61 T 22-04-2016 JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 PANTHER PTHR11731:SF123 161 430 9.0E-61 T 22-04-2016 JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 Gene3D G3DSA:3.40.50.10070 27 155 2.8E-41 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 Pfam PF04052 TolB amino-terminal domain 29 128 2.6E-26 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 Hamap MF_00671 Protein TolB [tolB]. 9 428 32.257 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 SUPERFAMILY SSF69304 158 430 3.4E-53 T 22-04-2016 JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 PANTHER PTHR11731 17 122 9.0E-61 T 22-04-2016 JE55_RS04850 fe1fc528078869855a5076888ef53beb 433 PANTHER PTHR11731 161 430 9.0E-61 T 22-04-2016 JE55_RS02735 c90000c0cdb712f7b8715dda952ae59b 393 SUPERFAMILY SSF53448 45 289 6.94E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS02735 c90000c0cdb712f7b8715dda952ae59b 393 PANTHER PTHR12726 46 388 6.3E-47 T 22-04-2016 JE55_RS02735 c90000c0cdb712f7b8715dda952ae59b 393 TIGRFAM TIGR03472 HpnI: hopanoid biosynthesis associated glycosyl transferase protein HpnI 6 383 4.0E-159 T 22-04-2016 IPR017835 Hopanoid biosynthesis associated glycosyltransferase, HpnI JE55_RS02735 c90000c0cdb712f7b8715dda952ae59b 393 Gene3D G3DSA:3.90.550.10 46 247 1.9E-11 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS02735 c90000c0cdb712f7b8715dda952ae59b 393 Pfam PF13506 Glycosyl transferase family 21 101 274 5.4E-41 T 22-04-2016 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|UniPathway: UPA00222 JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 PANTHER PTHR11265 1 313 3.8E-137 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 37.55 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 Pfam PF01795 MraW methylase family 4 310 8.2E-101 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 SUPERFAMILY SSF53335 216 311 3.16E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 SUPERFAMILY SSF53335 7 112 3.16E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 PIRSF PIRSF004486 1 312 6.2E-98 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 310 1.8E-104 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 Gene3D G3DSA:3.40.50.150 7 109 1.3E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 Gene3D G3DSA:3.40.50.150 219 311 1.3E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 PANTHER PTHR11265:SF0 1 313 3.8E-137 T 22-04-2016 JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 Gene3D G3DSA:1.10.150.170 112 218 1.3E-36 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS06340 6a92a5106eaef72a610dd537f60be5c6 313 SUPERFAMILY SSF81799 113 216 3.79E-32 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS00760 97358783c9a194040f4b7b239bd75c6e 329 SUPERFAMILY SSF51735 7 172 1.73E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00760 97358783c9a194040f4b7b239bd75c6e 329 SUPERFAMILY SSF48179 202 322 1.17E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS00760 97358783c9a194040f4b7b239bd75c6e 329 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 202 323 3.0E-27 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS00760 97358783c9a194040f4b7b239bd75c6e 329 PANTHER PTHR21708:SF29 143 324 1.1E-81 T 22-04-2016 JE55_RS00760 97358783c9a194040f4b7b239bd75c6e 329 PANTHER PTHR21708:SF29 2 127 1.1E-81 T 22-04-2016 JE55_RS00760 97358783c9a194040f4b7b239bd75c6e 329 PANTHER PTHR21708 143 324 1.1E-81 T 22-04-2016 JE55_RS00760 97358783c9a194040f4b7b239bd75c6e 329 PANTHER PTHR21708 2 127 1.1E-81 T 22-04-2016 JE55_RS00760 97358783c9a194040f4b7b239bd75c6e 329 Pfam PF02558 Ketopantoate reductase PanE/ApbA 9 110 1.6E-20 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS00760 97358783c9a194040f4b7b239bd75c6e 329 Gene3D G3DSA:1.10.1040.10 202 322 1.9E-28 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS00760 97358783c9a194040f4b7b239bd75c6e 329 Gene3D G3DSA:3.40.50.720 5 200 2.2E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 SMART SM00732 330 429 7.6E-36 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 SUPERFAMILY SSF47781 475 563 5.63E-29 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 SUPERFAMILY SSF158832 6 325 2.09E-121 T 22-04-2016 JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 SUPERFAMILY SSF47781 565 637 3.33E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 Pfam PF00575 S1 RNA binding domain 654 725 8.1E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 Gene3D G3DSA:1.10.10.650 4 113 2.7E-48 T 22-04-2016 IPR023319 Tex-like protein, HTH domain JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 PANTHER PTHR10724:SF1 8 762 0.0 T 22-04-2016 JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 Gene3D G3DSA:2.40.50.140 638 725 2.1E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 SMART SM00316 654 725 1.4E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 Pfam PF09371 Tex-like protein N-terminal domain 13 196 1.4E-71 T 22-04-2016 IPR018974 Tex-like protein, N-terminal JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 PANTHER PTHR10724 8 762 0.0 T 22-04-2016 JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 Gene3D G3DSA:3.30.420.140 330 455 2.0E-51 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 Gene3D G3DSA:1.10.150.310 504 635 7.7E-47 T 22-04-2016 IPR023097 Tex RuvX-like domain JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 SUPERFAMILY SSF50249 642 727 1.86E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 Pfam PF16921 Tex protein YqgF-like domain 330 456 2.5E-51 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 SUPERFAMILY SSF53098 326 474 1.29E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 Pfam PF12836 Helix-hairpin-helix motif 496 560 1.4E-27 T 22-04-2016 JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 Gene3D G3DSA:1.10.3500.10 456 502 3.7E-103 T 22-04-2016 IPR023323 Tex-like domain JE55_RS00085 ffccfe4a2369fe191ed463923991eb3c 774 Gene3D G3DSA:1.10.3500.10 114 326 3.7E-103 T 22-04-2016 IPR023323 Tex-like domain JE55_RS07815 b59d21d686fe7d9487ecb549b9ccf28a 218 Gene3D G3DSA:3.30.420.10 12 193 3.1E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS07815 b59d21d686fe7d9487ecb549b9ccf28a 218 SUPERFAMILY SSF53098 8 192 2.96E-23 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.2E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 9.2E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 9.2E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 9.2E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 9.2E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 9.2E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 Gene3D G3DSA:3.40.50.720 2 245 6.5E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 SUPERFAMILY SSF51735 4 245 2.49E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 4.2E-123 T 22-04-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|UniPathway: UPA00917 JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PANTHER PTHR24322 153 185 1.1E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PANTHER PTHR24322 8 137 1.1E-54 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PANTHER PTHR24322:SF328 153 185 1.1E-54 T 22-04-2016 JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 PANTHER PTHR24322:SF328 8 137 1.1E-54 T 22-04-2016 JE55_RS00040 a465ff37eb46c7bb91728df45da5244e 246 Pfam PF00106 short chain dehydrogenase 5 197 5.6E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS06025 7c29ddac149baca16647b40afaeaa379 167 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 JE55_RS06025 7c29ddac149baca16647b40afaeaa379 167 PANTHER PTHR10681 3 167 1.6E-48 T 22-04-2016 JE55_RS06025 7c29ddac149baca16647b40afaeaa379 167 PANTHER PTHR10681:SF81 3 167 1.6E-48 T 22-04-2016 JE55_RS06025 7c29ddac149baca16647b40afaeaa379 167 Pfam PF08534 Redoxin 20 163 6.6E-32 T 22-04-2016 IPR013740 Redoxin GO:0016491 JE55_RS06025 7c29ddac149baca16647b40afaeaa379 167 Gene3D G3DSA:3.40.30.10 3 167 5.0E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS06025 7c29ddac149baca16647b40afaeaa379 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 167 38.344 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 JE55_RS06025 7c29ddac149baca16647b40afaeaa379 167 SUPERFAMILY SSF52833 1 164 6.28E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS16055 3df915decaa0ebc981849bfe17b1a4f9 153 Pfam PF09842 Predicted membrane protein (DUF2069) 15 113 5.3E-30 T 22-04-2016 IPR018643 Protein of unknown function DUF2069, membrane JE55_RS15225 8126c8d937603bce3f26297d8c6619c1 220 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 216 33.055 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 JE55_RS15225 8126c8d937603bce3f26297d8c6619c1 220 PANTHER PTHR10920:SF20 1 217 4.4E-89 T 22-04-2016 JE55_RS15225 8126c8d937603bce3f26297d8c6619c1 220 PANTHER PTHR10920 1 217 4.4E-89 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 JE55_RS15225 8126c8d937603bce3f26297d8c6619c1 220 Gene3D G3DSA:3.40.50.150 3 218 1.7E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS15225 8126c8d937603bce3f26297d8c6619c1 220 PIRSF PIRSF005461 1 220 1.4E-69 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 JE55_RS15225 8126c8d937603bce3f26297d8c6619c1 220 SUPERFAMILY SSF53335 27 216 4.22E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS15225 8126c8d937603bce3f26297d8c6619c1 220 Pfam PF01728 FtsJ-like methyltransferase 28 214 3.5E-52 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 JE55_RS04255 32c0477fa7af850fc7eb9a3f25379584 435 PANTHER PTHR30483:SF8 1 422 2.5E-206 T 22-04-2016 JE55_RS04255 32c0477fa7af850fc7eb9a3f25379584 435 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 35 407 4.7E-180 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA JE55_RS04255 32c0477fa7af850fc7eb9a3f25379584 435 Gene3D G3DSA:3.40.50.2300 150 349 1.0E-73 T 22-04-2016 JE55_RS04255 32c0477fa7af850fc7eb9a3f25379584 435 Pfam PF13433 Periplasmic binding protein domain 35 409 2.7E-170 T 22-04-2016 JE55_RS04255 32c0477fa7af850fc7eb9a3f25379584 435 SUPERFAMILY SSF53822 34 411 4.71E-86 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS04255 32c0477fa7af850fc7eb9a3f25379584 435 PANTHER PTHR30483 1 422 2.5E-206 T 22-04-2016 JE55_RS09705 34687ebbfc20ffa5be4faa799607347c 218 Gene3D G3DSA:3.30.1360.40 4 81 9.7E-19 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain JE55_RS09705 34687ebbfc20ffa5be4faa799607347c 218 PANTHER PTHR34698 1 211 9.0E-90 T 22-04-2016 JE55_RS09705 34687ebbfc20ffa5be4faa799607347c 218 SMART SM00796 4 202 8.0E-107 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D JE55_RS09705 34687ebbfc20ffa5be4faa799607347c 218 SUPERFAMILY SSF50891 88 213 3.0E-46 T 22-04-2016 IPR029000 Cyclophilin-like domain JE55_RS09705 34687ebbfc20ffa5be4faa799607347c 218 Gene3D G3DSA:2.40.100.10 88 211 3.3E-52 T 22-04-2016 IPR029000 Cyclophilin-like domain JE55_RS09705 34687ebbfc20ffa5be4faa799607347c 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 1.2E-78 T 22-04-2016 IPR010016 KipI family JE55_RS09705 34687ebbfc20ffa5be4faa799607347c 218 PANTHER PTHR34698:SF2 1 211 9.0E-90 T 22-04-2016 JE55_RS09705 34687ebbfc20ffa5be4faa799607347c 218 Pfam PF02682 Allophanate hydrolase subunit 1 5 202 2.6E-74 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D JE55_RS09705 34687ebbfc20ffa5be4faa799607347c 218 SUPERFAMILY SSF160467 5 92 5.1E-16 T 22-04-2016 JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 PANTHER PTHR21248 17 479 2.1E-157 T 22-04-2016 JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 Gene3D G3DSA:3.30.870.10 111 313 6.4E-48 T 22-04-2016 JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 Gene3D G3DSA:3.30.870.10 319 476 8.9E-39 T 22-04-2016 JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 Pfam PF13396 Phospholipase_D-nuclease N-terminal 18 59 1.5E-5 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 11 479 2.6E-109 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 Pfam PF13091 PLD-like domain 135 277 5.1E-11 T 22-04-2016 IPR025202 Phospholipase D-like domain JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 Pfam PF13091 PLD-like domain 321 445 2.7E-25 T 22-04-2016 IPR025202 Phospholipase D-like domain JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 SUPERFAMILY SSF56024 270 466 1.53E-48 T 22-04-2016 JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 Hamap MF_00190 Cardiolipin synthase A [clsA]. 1 479 47.302 T 22-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 PANTHER PTHR21248:SF9 17 479 2.1E-157 T 22-04-2016 JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 SMART SM00155 392 419 2.9E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 SMART SM00155 217 244 1.3E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 JE55_RS01280 497370d3dda6dcef68a563ee7ac288f9 479 SUPERFAMILY SSF56024 107 308 2.73E-52 T 22-04-2016 JE55_RS16205 b56b2ac509547a07430c91a8e5831235 337 Gene3D G3DSA:3.30.930.10 8 336 9.4E-125 T 22-04-2016 JE55_RS16205 b56b2ac509547a07430c91a8e5831235 337 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 19 86 8.4E-20 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 JE55_RS16205 b56b2ac509547a07430c91a8e5831235 337 Pfam PF01409 tRNA synthetases class II core domain (F) 91 336 3.3E-96 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 JE55_RS16205 b56b2ac509547a07430c91a8e5831235 337 PANTHER PTHR11538 38 51 2.9E-91 T 22-04-2016 JE55_RS16205 b56b2ac509547a07430c91a8e5831235 337 PANTHER PTHR11538 89 336 2.9E-91 T 22-04-2016 JE55_RS16205 b56b2ac509547a07430c91a8e5831235 337 SUPERFAMILY SSF55681 91 336 2.49E-75 T 22-04-2016 JE55_RS16205 b56b2ac509547a07430c91a8e5831235 337 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 37 336 3.1E-99 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 JE55_RS16205 b56b2ac509547a07430c91a8e5831235 337 SUPERFAMILY SSF46589 14 98 3.56E-19 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 JE55_RS16205 b56b2ac509547a07430c91a8e5831235 337 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 7 336 46.179 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 Pfam PF00512 His Kinase A (phospho-acceptor) domain 154 216 3.8E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 SUPERFAMILY SSF55785 32 80 1.34E-6 T 22-04-2016 IPR000014 PAS domain JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 SUPERFAMILY SSF47384 142 216 3.92E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 SMART SM00388 152 220 3.6E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 260 379 6.4E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 Gene3D G3DSA:3.30.565.10 223 379 1.9E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 Gene3D G3DSA:3.30.450.20 32 120 2.5E-11 T 22-04-2016 JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 PANTHER PTHR24423 32 379 3.0E-81 T 22-04-2016 JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 Gene3D G3DSA:1.10.287.130 144 213 1.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 377 2.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 326 2.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 340 2.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 359 2.6E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 SUPERFAMILY SSF55874 224 378 9.17E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 SMART SM00387 260 380 8.3E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02310 34db6062a309a6781d0aa8d4355aa8a0 380 PANTHER PTHR24423:SF488 32 379 3.0E-81 T 22-04-2016 JE55_RS17020 c1347b9a461be2152416ff1d1665fb24 513 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 252 6.7E-53 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JE55_RS17020 c1347b9a461be2152416ff1d1665fb24 513 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 371 391 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 JE55_RS17020 c1347b9a461be2152416ff1d1665fb24 513 SUPERFAMILY SSF53067 4 256 1.2E-59 T 22-04-2016 JE55_RS17020 c1347b9a461be2152416ff1d1665fb24 513 Gene3D G3DSA:3.30.420.40 256 507 5.9E-54 T 22-04-2016 JE55_RS17020 c1347b9a461be2152416ff1d1665fb24 513 PANTHER PTHR10196 1 512 2.4E-120 T 22-04-2016 JE55_RS17020 c1347b9a461be2152416ff1d1665fb24 513 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 265 459 8.6E-38 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JE55_RS17020 c1347b9a461be2152416ff1d1665fb24 513 SUPERFAMILY SSF53067 255 507 1.11E-55 T 22-04-2016 JE55_RS17020 c1347b9a461be2152416ff1d1665fb24 513 Gene3D G3DSA:3.30.420.40 2 252 2.5E-59 T 22-04-2016 JE55_RS17020 c1347b9a461be2152416ff1d1665fb24 513 PANTHER PTHR10196:SF67 1 512 2.4E-120 T 22-04-2016 JE55_RS17020 c1347b9a461be2152416ff1d1665fb24 513 PIRSF PIRSF000538 1 512 8.5E-142 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 JE55_RS08635 044ba63eea70cd7d9800b51ed0d18a1a 161 PANTHER PTHR11407 1 76 1.6E-16 T 22-04-2016 JE55_RS08635 044ba63eea70cd7d9800b51ed0d18a1a 161 PANTHER PTHR11407:SF34 1 76 1.6E-16 T 22-04-2016 JE55_RS08635 044ba63eea70cd7d9800b51ed0d18a1a 161 Gene3D G3DSA:1.10.530.10 24 124 4.4E-23 T 22-04-2016 JE55_RS08635 044ba63eea70cd7d9800b51ed0d18a1a 161 Pfam PF01464 Transglycosylase SLT domain 26 122 1.2E-20 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 JE55_RS08635 044ba63eea70cd7d9800b51ed0d18a1a 161 SUPERFAMILY SSF53955 21 144 1.79E-42 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS17005 0a48da3b39124161dafc9f5822275877 535 Pfam PF00005 ABC transporter 305 455 1.9E-14 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS17005 0a48da3b39124161dafc9f5822275877 535 Pfam PF00005 ABC transporter 49 199 3.2E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS17005 0a48da3b39124161dafc9f5822275877 535 Gene3D G3DSA:3.40.50.300 305 515 5.6E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17005 0a48da3b39124161dafc9f5822275877 535 SUPERFAMILY SSF52540 32 252 6.85E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17005 0a48da3b39124161dafc9f5822275877 535 SMART SM00382 58 246 3.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS17005 0a48da3b39124161dafc9f5822275877 535 SMART SM00382 309 504 1.1E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS17005 0a48da3b39124161dafc9f5822275877 535 PANTHER PTHR24220 35 409 1.6E-146 T 22-04-2016 JE55_RS17005 0a48da3b39124161dafc9f5822275877 535 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS17005 0a48da3b39124161dafc9f5822275877 535 Gene3D G3DSA:3.40.50.300 30 252 1.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17005 0a48da3b39124161dafc9f5822275877 535 PANTHER PTHR24220:SF416 35 409 1.6E-146 T 22-04-2016 JE55_RS17005 0a48da3b39124161dafc9f5822275877 535 SUPERFAMILY SSF52540 305 513 4.12E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00590 39fdd7ce9f72ed2c9124a8a26c433ad0 160 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 129 7.9E-25 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain JE55_RS00590 39fdd7ce9f72ed2c9124a8a26c433ad0 160 PANTHER PTHR12418 16 146 2.4E-26 T 22-04-2016 JE55_RS00590 39fdd7ce9f72ed2c9124a8a26c433ad0 160 SUPERFAMILY SSF54637 16 132 2.38E-32 T 22-04-2016 IPR029069 HotDog domain JE55_RS00590 39fdd7ce9f72ed2c9124a8a26c433ad0 160 PANTHER PTHR12418:SF27 16 146 2.4E-26 T 22-04-2016 JE55_RS00590 39fdd7ce9f72ed2c9124a8a26c433ad0 160 Gene3D G3DSA:3.10.129.10 15 134 2.7E-35 T 22-04-2016 IPR029069 HotDog domain JE55_RS00590 39fdd7ce9f72ed2c9124a8a26c433ad0 160 Pfam PF03061 Thioesterase superfamily 50 120 6.5E-16 T 22-04-2016 IPR006683 Thioesterase domain JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 SUPERFAMILY SSF69255 419 510 1.41E-17 T 22-04-2016 JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 27 513 6.6E-59 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 SUPERFAMILY SSF69279 224 358 5.27E-8 T 22-04-2016 JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 Gene3D G3DSA:2.40.50.230 425 509 5.6E-20 T 22-04-2016 IPR006531 Gp5 N-terminal JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 PANTHER PTHR32305:SF7 7 514 2.3E-16 T 22-04-2016 JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 SUPERFAMILY SSF69279 390 407 5.27E-8 T 22-04-2016 JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 Gene3D G3DSA:3.55.50.10 106 208 1.1E-14 T 22-04-2016 JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 SUPERFAMILY SSF69279 20 203 3.06E-36 T 22-04-2016 JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 582 687 3.8E-31 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 PANTHER PTHR32305 7 514 2.3E-16 T 22-04-2016 JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 745 902 3.1E-41 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal JE55_RS15615 99669a19fcbfd123b915fff9804d8c08 935 Pfam PF05954 Phage late control gene D protein (GPD) 37 357 2.3E-63 T 22-04-2016 JE55_RS10305 e32c40c42507f723f47fca95da9ef3db 448 PANTHER PTHR11986 6 447 3.9E-166 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS10305 e32c40c42507f723f47fca95da9ef3db 448 Gene3D G3DSA:3.40.640.10 68 341 2.4E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS10305 e32c40c42507f723f47fca95da9ef3db 448 SUPERFAMILY SSF53383 7 440 1.28E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS10305 e32c40c42507f723f47fca95da9ef3db 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS10305 e32c40c42507f723f47fca95da9ef3db 448 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 17 438 4.1E-155 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 JE55_RS10305 e32c40c42507f723f47fca95da9ef3db 448 Gene3D G3DSA:3.90.1150.10 345 444 2.0E-49 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS10305 e32c40c42507f723f47fca95da9ef3db 448 Gene3D G3DSA:3.90.1150.10 6 67 2.0E-49 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS10305 e32c40c42507f723f47fca95da9ef3db 448 PANTHER PTHR11986:SF8 6 447 3.9E-166 T 22-04-2016 JE55_RS10305 e32c40c42507f723f47fca95da9ef3db 448 Pfam PF00202 Aminotransferase class-III 30 437 2.2E-106 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS02040 17db86f4a7f11110de136cb5d191c707 276 Pfam PF02811 PHP domain 4 157 5.0E-7 T 22-04-2016 IPR004013 PHP domain GO:0003824 JE55_RS02040 17db86f4a7f11110de136cb5d191c707 276 PANTHER PTHR30007:SF4 1 251 1.4E-61 T 22-04-2016 JE55_RS02040 17db86f4a7f11110de136cb5d191c707 276 SMART SM00481 3 68 6.4E-11 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 JE55_RS02040 17db86f4a7f11110de136cb5d191c707 276 Gene3D G3DSA:3.20.20.140 1 86 5.5E-38 T 22-04-2016 JE55_RS02040 17db86f4a7f11110de136cb5d191c707 276 Gene3D G3DSA:3.20.20.140 156 253 5.5E-38 T 22-04-2016 JE55_RS02040 17db86f4a7f11110de136cb5d191c707 276 PANTHER PTHR30007 1 251 1.4E-61 T 22-04-2016 JE55_RS02040 17db86f4a7f11110de136cb5d191c707 276 SUPERFAMILY SSF89550 164 275 3.73E-47 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 JE55_RS02040 17db86f4a7f11110de136cb5d191c707 276 SUPERFAMILY SSF89550 1 81 3.73E-47 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 JE55_RS28555 35adb341de99a5de2ac0988230ca677d 458 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 87 457 2.1E-121 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 JE55_RS28555 35adb341de99a5de2ac0988230ca677d 458 Gene3D G3DSA:3.90.550.10 87 369 1.0E-91 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS28555 35adb341de99a5de2ac0988230ca677d 458 SUPERFAMILY SSF53448 86 378 5.63E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS28555 35adb341de99a5de2ac0988230ca677d 458 Pfam PF00483 Nucleotidyl transferase 89 384 2.5E-53 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 JE55_RS28555 35adb341de99a5de2ac0988230ca677d 458 SUPERFAMILY SSF159283 381 446 3.79E-20 T 22-04-2016 JE55_RS28555 35adb341de99a5de2ac0988230ca677d 458 PANTHER PTHR12526 240 387 3.1E-38 T 22-04-2016 JE55_RS28555 35adb341de99a5de2ac0988230ca677d 458 Pfam PF01050 Mannose-6-phosphate isomerase 413 457 9.7E-9 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 JE55_RS16510 53c67bbddced7c8ecffecc5b26ff119f 408 Pfam PF00083 Sugar (and other) transporter 246 390 3.6E-11 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JE55_RS16510 53c67bbddced7c8ecffecc5b26ff119f 408 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS16510 53c67bbddced7c8ecffecc5b26ff119f 408 Gene3D G3DSA:1.20.1250.20 209 392 2.2E-23 T 22-04-2016 JE55_RS16510 53c67bbddced7c8ecffecc5b26ff119f 408 PANTHER PTHR23508 6 397 2.3E-147 T 22-04-2016 JE55_RS16510 53c67bbddced7c8ecffecc5b26ff119f 408 Gene3D G3DSA:1.20.1250.20 13 196 2.1E-33 T 22-04-2016 JE55_RS16510 53c67bbddced7c8ecffecc5b26ff119f 408 Pfam PF07690 Major Facilitator Superfamily 22 245 1.9E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS16510 53c67bbddced7c8ecffecc5b26ff119f 408 PANTHER PTHR23508:SF10 6 397 2.3E-147 T 22-04-2016 JE55_RS16510 53c67bbddced7c8ecffecc5b26ff119f 408 SUPERFAMILY SSF103473 5 397 1.12E-75 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 SUPERFAMILY SSF54211 244 415 8.54E-59 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 SMART SM00433 43 815 2.9E-258 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 SUPERFAMILY SSF55874 13 239 8.18E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR01159 DNA gyrase subunit B signature 243 265 3.5E-73 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR01159 DNA gyrase subunit B signature 219 232 3.5E-73 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR01159 DNA gyrase subunit B signature 335 351 3.5E-73 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR01159 DNA gyrase subunit B signature 397 417 3.5E-73 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR01159 DNA gyrase subunit B signature 13 23 3.5E-73 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR01159 DNA gyrase subunit B signature 791 807 3.5E-73 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR01159 DNA gyrase subunit B signature 204 219 3.5E-73 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR01159 DNA gyrase subunit B signature 775 787 3.5E-73 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR01159 DNA gyrase subunit B signature 383 397 3.5E-73 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR01159 DNA gyrase subunit B signature 493 502 3.5E-73 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 SMART SM00387 39 199 9.7E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 ProSitePatterns PS00177 DNA topoisomerase II signature. 445 453 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 751 811 9.3E-29 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 Pfam PF01751 Toprim domain 442 554 1.6E-17 T 22-04-2016 IPR006171 Toprim domain JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 10 822 100.132 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 SUPERFAMILY SSF56719 417 583 7.32E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 SUPERFAMILY SSF56719 748 813 7.32E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 Gene3D G3DSA:3.30.230.10 243 415 9.5E-75 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PANTHER PTHR10169 1 576 5.1E-291 T 22-04-2016 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PANTHER PTHR10169 742 822 5.1E-291 T 22-04-2016 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 13 822 8.3E-296 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 Gene3D G3DSA:3.30.565.10 13 241 8.7E-93 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 Gene3D G3DSA:3.40.50.670 427 573 1.6E-99 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 Gene3D G3DSA:3.40.50.670 736 804 1.6E-99 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 197 4.8E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR00418 DNA topoisomerase II family signature 528 545 3.2E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR00418 DNA topoisomerase II family signature 754 770 3.2E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR00418 DNA topoisomerase II family signature 43 58 3.2E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR00418 DNA topoisomerase II family signature 78 91 3.2E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR00418 DNA topoisomerase II family signature 125 139 3.2E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR00418 DNA topoisomerase II family signature 443 457 3.2E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR00418 DNA topoisomerase II family signature 291 304 3.2E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR00418 DNA topoisomerase II family signature 510 526 3.2E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 PRINTS PR00418 DNA topoisomerase II family signature 548 560 3.2E-68 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS08975 9f1e29d46d9f2d12aaeb83f738996183 822 Pfam PF00204 DNA gyrase B 244 413 3.2E-58 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS07565 0b51aab405bcd042cdb60c521b73fb7d 365 Gene3D G3DSA:3.10.180.10 5 161 1.7E-50 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS07565 0b51aab405bcd042cdb60c521b73fb7d 365 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 14 360 4.1E-121 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 JE55_RS07565 0b51aab405bcd042cdb60c521b73fb7d 365 PANTHER PTHR11959 8 362 4.8E-123 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 JE55_RS07565 0b51aab405bcd042cdb60c521b73fb7d 365 PIRSF PIRSF009283 1 362 2.7E-122 T 22-04-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 JE55_RS07565 0b51aab405bcd042cdb60c521b73fb7d 365 SUPERFAMILY SSF54593 1 348 2.23E-87 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS07565 0b51aab405bcd042cdb60c521b73fb7d 365 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 171 282 1.2E-14 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JE55_RS07565 0b51aab405bcd042cdb60c521b73fb7d 365 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 154 2.8E-68 T 22-04-2016 JE55_RS07565 0b51aab405bcd042cdb60c521b73fb7d 365 PANTHER PTHR11959:SF1 8 362 4.8E-123 T 22-04-2016 JE55_RS07565 0b51aab405bcd042cdb60c521b73fb7d 365 Gene3D G3DSA:3.10.180.10 167 361 5.8E-69 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 Pfam PF00682 HMGL-like 5 274 1.2E-96 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 PANTHER PTHR10277 1 512 3.8E-243 T 22-04-2016 JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 501 1.3E-213 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 PANTHER PTHR10277:SF9 1 512 3.8E-243 T 22-04-2016 JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 SUPERFAMILY SSF51569 1 292 2.56E-96 T 22-04-2016 JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 SMART SM00917 371 504 1.4E-42 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 Gene3D G3DSA:3.20.20.70 1 347 1.4E-144 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 503 3.7E-35 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 SUPERFAMILY SSF110921 394 503 9.02E-29 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 JE55_RS14335 215e1ff7a4d67449cf85bb5366aa2782 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 513 42.561 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 SUPERFAMILY SSF54747 3 73 1.07E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 PANTHER PTHR11661 1 142 1.7E-75 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.9E-66 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 SMART SM00649 9 141 1.5E-88 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.82 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.3E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 2.2E-25 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 SUPERFAMILY SSF46906 68 141 9.68E-28 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 Gene3D G3DSA:1.10.10.250 73 141 1.1E-32 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 Gene3D G3DSA:3.30.1550.10 2 72 1.5E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal JE55_RS07450 3f065562db518031b744cabbf23d11c0 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 7.0E-17 T 22-04-2016 JE55_RS03515 15e2e4bb763802241148b5e1591c2e7b 249 Gene3D G3DSA:3.40.50.620 1 247 7.8E-105 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS03515 15e2e4bb763802241148b5e1591c2e7b 249 PANTHER PTHR21294:SF8 1 249 5.9E-155 T 22-04-2016 JE55_RS03515 15e2e4bb763802241148b5e1591c2e7b 249 Pfam PF01012 Electron transfer flavoprotein domain 28 206 8.2E-45 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 JE55_RS03515 15e2e4bb763802241148b5e1591c2e7b 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 22-04-2016 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 JE55_RS03515 15e2e4bb763802241148b5e1591c2e7b 249 PIRSF PIRSF000090 1 249 2.8E-85 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 JE55_RS03515 15e2e4bb763802241148b5e1591c2e7b 249 SUPERFAMILY SSF52402 1 242 1.67E-86 T 22-04-2016 JE55_RS03515 15e2e4bb763802241148b5e1591c2e7b 249 SMART SM00893 23 211 1.7E-66 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 JE55_RS03515 15e2e4bb763802241148b5e1591c2e7b 249 PANTHER PTHR21294 1 249 5.9E-155 T 22-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 PANTHER PTHR10520 1 286 2.0E-147 T 22-04-2016 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 Gene3D G3DSA:3.30.70.260 3 89 6.0E-27 T 22-04-2016 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 Gene3D G3DSA:3.40.50.170 92 288 1.6E-57 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 SUPERFAMILY SSF53328 94 293 6.8E-62 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 292 48.413 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 292 4.8E-101 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 Pfam PF00551 Formyl transferase 94 273 3.8E-38 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 8.2E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 266 291 8.2E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 94 116 8.2E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 116 143 8.2E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 244 266 8.2E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 8.2E-55 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 PIRSF PIRSF036480 4 293 2.6E-107 T 22-04-2016 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 PANTHER PTHR10520:SF7 1 286 2.0E-147 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 JE55_RS11220 4b4761dd806a5c8a122ddd842bab16de 293 SUPERFAMILY SSF55021 4 91 2.08E-16 T 22-04-2016 JE55_RS15890 fe713b89689c717d1a207810b8a064ac 800 SMART SM00382 579 773 2.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS15890 fe713b89689c717d1a207810b8a064ac 800 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 303 1.2E-24 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS15890 fe713b89689c717d1a207810b8a064ac 800 SUPERFAMILY SSF52540 553 795 2.47E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15890 fe713b89689c717d1a207810b8a064ac 800 Pfam PF00005 ABC transporter 572 726 9.5E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS15890 fe713b89689c717d1a207810b8a064ac 800 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 774 795 1.8E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JE55_RS15890 fe713b89689c717d1a207810b8a064ac 800 Gene3D G3DSA:3.40.50.300 552 793 8.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15890 fe713b89689c717d1a207810b8a064ac 800 PANTHER PTHR24220:SF491 556 797 4.4E-84 T 22-04-2016 JE55_RS15890 fe713b89689c717d1a207810b8a064ac 800 PANTHER PTHR24220 556 797 4.4E-84 T 22-04-2016 JE55_RS00180 2a4371d249ae595358c71d14142c5c6c 465 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 285 464 5.6E-18 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 JE55_RS00180 2a4371d249ae595358c71d14142c5c6c 465 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 447 457 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site JE55_RS00180 2a4371d249ae595358c71d14142c5c6c 465 PANTHER PTHR11061:SF30 25 465 4.0E-100 T 22-04-2016 JE55_RS00180 2a4371d249ae595358c71d14142c5c6c 465 SUPERFAMILY SSF50249 25 85 2.06E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00180 2a4371d249ae595358c71d14142c5c6c 465 SUPERFAMILY SSF53335 87 464 1.02E-77 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS00180 2a4371d249ae595358c71d14142c5c6c 465 Gene3D G3DSA:3.40.50.150 265 464 1.3E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS00180 2a4371d249ae595358c71d14142c5c6c 465 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 24 465 70.692 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 JE55_RS00180 2a4371d249ae595358c71d14142c5c6c 465 PANTHER PTHR11061 25 465 4.0E-100 T 22-04-2016 JE55_RS00180 2a4371d249ae595358c71d14142c5c6c 465 Gene3D G3DSA:2.40.50.140 23 99 3.0E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 Gene3D G3DSA:1.10.8.50 137 276 2.5E-46 T 22-04-2016 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 SMART SM00898 2 118 7.0E-51 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 SUPERFAMILY SSF81624 2 145 4.45E-39 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 136 225 1.3E-18 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 SUPERFAMILY SSF46946 137 228 4.12E-25 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 ProSitePatterns PS01242 Zinc finger FPG-type signature. 251 275 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 Gene3D G3DSA:3.20.190.10 2 136 7.1E-40 T 22-04-2016 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 PANTHER PTHR22993 1 276 6.6E-119 T 22-04-2016 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 276 42.784 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 PANTHER PTHR22993:SF15 1 276 6.6E-119 T 22-04-2016 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 SUPERFAMILY SSF57716 224 275 8.38E-18 T 22-04-2016 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 Pfam PF06827 Zinc finger found in FPG and IleRS 248 275 5.5E-12 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 SMART SM01232 136 228 1.2E-41 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 275 1.1E-84 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 JE55_RS11135 dc928b6cd260e78471d1a7baed9013a2 276 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 1.7E-33 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 JE55_RS27820 f24a0e91d221820a7e2aab1410af3d08 554 PANTHER PTHR11575 234 554 1.2E-72 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 JE55_RS27820 f24a0e91d221820a7e2aab1410af3d08 554 Gene3D G3DSA:3.60.21.10 296 554 2.6E-60 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS27820 f24a0e91d221820a7e2aab1410af3d08 554 SUPERFAMILY SSF56300 302 554 1.3E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS27820 f24a0e91d221820a7e2aab1410af3d08 554 ProSitePatterns PS00786 5'-nucleotidase signature 2. 390 401 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 JE55_RS27820 f24a0e91d221820a7e2aab1410af3d08 554 PANTHER PTHR11575:SF6 234 554 1.2E-72 T 22-04-2016 JE55_RS13015 cbc9efdea7fc2add1d1ddec0075f2a08 298 Gene3D G3DSA:1.10.10.10 10 91 1.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13015 cbc9efdea7fc2add1d1ddec0075f2a08 298 SUPERFAMILY SSF53850 97 292 1.04E-29 T 22-04-2016 JE55_RS13015 cbc9efdea7fc2add1d1ddec0075f2a08 298 Pfam PF03466 LysR substrate binding domain 97 288 2.8E-27 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS13015 cbc9efdea7fc2add1d1ddec0075f2a08 298 SUPERFAMILY SSF46785 10 120 1.14E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13015 cbc9efdea7fc2add1d1ddec0075f2a08 298 Gene3D G3DSA:3.40.190.10 92 195 2.3E-21 T 22-04-2016 JE55_RS13015 cbc9efdea7fc2add1d1ddec0075f2a08 298 Gene3D G3DSA:3.40.190.10 196 249 2.4E-5 T 22-04-2016 JE55_RS13015 cbc9efdea7fc2add1d1ddec0075f2a08 298 PANTHER PTHR30579:SF0 7 292 1.1E-93 T 22-04-2016 JE55_RS13015 cbc9efdea7fc2add1d1ddec0075f2a08 298 PANTHER PTHR30579 7 292 1.1E-93 T 22-04-2016 JE55_RS13015 cbc9efdea7fc2add1d1ddec0075f2a08 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 73 6.8E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS04085 ce506833caca8e9a4e5aa9c5024eb849 411 PANTHER PTHR23502 12 385 7.6E-122 T 22-04-2016 JE55_RS04085 ce506833caca8e9a4e5aa9c5024eb849 411 Pfam PF07690 Major Facilitator Superfamily 20 360 3.1E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS04085 ce506833caca8e9a4e5aa9c5024eb849 411 SUPERFAMILY SSF103473 4 400 3.14E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS04085 ce506833caca8e9a4e5aa9c5024eb849 411 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 12 383 2.2E-97 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 JE55_RS04085 ce506833caca8e9a4e5aa9c5024eb849 411 PANTHER PTHR23502:SF39 12 385 7.6E-122 T 22-04-2016 JE55_RS04085 ce506833caca8e9a4e5aa9c5024eb849 411 Gene3D G3DSA:1.20.1250.20 214 394 3.1E-11 T 22-04-2016 JE55_RS04085 ce506833caca8e9a4e5aa9c5024eb849 411 Gene3D G3DSA:1.20.1250.20 11 198 1.0E-27 T 22-04-2016 JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 2.7E-34 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 SUPERFAMILY SSF52518 3 187 4.61E-49 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 Gene3D G3DSA:3.40.50.970 361 584 3.6E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 PANTHER PTHR18968:SF14 1 580 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 Gene3D G3DSA:3.40.50.970 3 181 1.5E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 PANTHER PTHR18968 1 580 0.0 T 22-04-2016 JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 553 1.9E-33 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 TIGRFAM TIGR01504 glyox_carbo_lig: glyoxylate carboligase 2 590 0.0 T 22-04-2016 IPR006397 Glyoxylate carboligase GO:0009028|GO:0009436 KEGG: 00630+4.1.1.47|UniPathway: UPA00864 JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 Gene3D G3DSA:3.40.50.1220 186 360 1.9E-48 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 SUPERFAMILY SSF52518 369 563 3.99E-50 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 172 3.0E-52 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JE55_RS00465 78659d836c8ad30d9f4d7c7a79843368 591 SUPERFAMILY SSF52467 186 376 1.6E-46 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS13840 5bb26ba5b8ced5c2a1f682b23fc199fc 488 PIRSF PIRSF020818 1 424 1.9E-206 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase JE55_RS13840 5bb26ba5b8ced5c2a1f682b23fc199fc 488 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 411 1.8E-175 T 22-04-2016 IPR010915 Polyhydroxyalkanoate depolymerase JE55_RS13840 5bb26ba5b8ced5c2a1f682b23fc199fc 488 Pfam PF06850 PHB de-polymerase C-terminus 211 412 1.1E-93 T 22-04-2016 IPR009656 PHB de-polymerase, C-terminal JE55_RS13840 5bb26ba5b8ced5c2a1f682b23fc199fc 488 SUPERFAMILY SSF53474 106 410 8.53E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS13840 5bb26ba5b8ced5c2a1f682b23fc199fc 488 Gene3D G3DSA:3.40.50.1820 106 237 4.7E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS13840 5bb26ba5b8ced5c2a1f682b23fc199fc 488 Gene3D G3DSA:3.40.50.1820 276 412 4.7E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS29060 6959e3bd09cc6b01a8670effada6ffe6 285 Gene3D G3DSA:3.40.462.10 108 285 5.3E-85 T 22-04-2016 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain KEGG: 00908+1.5.99.12 JE55_RS29060 6959e3bd09cc6b01a8670effada6ffe6 285 Gene3D G3DSA:3.30.465.10 1 106 3.0E-33 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 JE55_RS29060 6959e3bd09cc6b01a8670effada6ffe6 285 SUPERFAMILY SSF55103 109 285 2.16E-80 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JE55_RS29060 6959e3bd09cc6b01a8670effada6ffe6 285 SUPERFAMILY SSF56176 2 105 1.2E-12 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS29060 6959e3bd09cc6b01a8670effada6ffe6 285 Pfam PF09129 Cholesterol oxidase, substrate-binding 110 285 2.9E-80 T 22-04-2016 IPR015213 Cholesterol oxidase, substrate-binding JE55_RS03525 ba9cea71bf3e31e11ddb951b64f99acf 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 215 1.3E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS03525 ba9cea71bf3e31e11ddb951b64f99acf 217 SUPERFAMILY SSF161098 8 210 1.05E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS03525 ba9cea71bf3e31e11ddb951b64f99acf 217 PANTHER PTHR30450:SF1 1 217 5.8E-117 T 22-04-2016 JE55_RS03525 ba9cea71bf3e31e11ddb951b64f99acf 217 Gene3D G3DSA:1.10.3720.10 6 215 3.1E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS03525 ba9cea71bf3e31e11ddb951b64f99acf 217 PANTHER PTHR30450 1 217 5.8E-117 T 22-04-2016 JE55_RS15945 0c864dab35f45b74a7e0e7793864879a 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 126 3.1E-26 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 JE55_RS15945 0c864dab35f45b74a7e0e7793864879a 345 Gene3D G3DSA:3.40.50.720 8 143 2.6E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS15945 0c864dab35f45b74a7e0e7793864879a 345 SUPERFAMILY SSF51735 9 160 1.97E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS15945 0c864dab35f45b74a7e0e7793864879a 345 SUPERFAMILY SSF55347 136 302 1.31E-30 T 22-04-2016 JE55_RS15945 0c864dab35f45b74a7e0e7793864879a 345 PANTHER PTHR22604 10 345 1.6E-103 T 22-04-2016 JE55_RS15945 0c864dab35f45b74a7e0e7793864879a 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 146 208 1.2E-6 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 JE55_RS15945 0c864dab35f45b74a7e0e7793864879a 345 Gene3D G3DSA:3.30.360.10 144 345 4.6E-55 T 22-04-2016 JE55_RS15945 0c864dab35f45b74a7e0e7793864879a 345 PANTHER PTHR22604:SF92 10 345 1.6E-103 T 22-04-2016 JE55_RS02690 1bf363cd7fbdbbf6c029bf9886f31ff2 410 SUPERFAMILY SSF53383 15 399 2.72E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS02690 1bf363cd7fbdbbf6c029bf9886f31ff2 410 PANTHER PTHR11986 6 406 1.1E-209 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS02690 1bf363cd7fbdbbf6c029bf9886f31ff2 410 Pfam PF00202 Aminotransferase class-III 24 398 1.2E-119 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS02690 1bf363cd7fbdbbf6c029bf9886f31ff2 410 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 12 399 44.104 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 JE55_RS02690 1bf363cd7fbdbbf6c029bf9886f31ff2 410 Gene3D G3DSA:3.40.640.10 59 300 4.9E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS02690 1bf363cd7fbdbbf6c029bf9886f31ff2 410 PANTHER PTHR11986:SF71 6 406 1.1E-209 T 22-04-2016 JE55_RS02690 1bf363cd7fbdbbf6c029bf9886f31ff2 410 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 6 401 1.2E-217 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 JE55_RS02690 1bf363cd7fbdbbf6c029bf9886f31ff2 410 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 398 2.2E-144 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 JE55_RS02690 1bf363cd7fbdbbf6c029bf9886f31ff2 410 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 221 258 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS02690 1bf363cd7fbdbbf6c029bf9886f31ff2 410 Gene3D G3DSA:3.90.1150.10 9 58 5.6E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS02690 1bf363cd7fbdbbf6c029bf9886f31ff2 410 Gene3D G3DSA:3.90.1150.10 305 400 5.6E-36 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS15060 8c94c95e9462edda5ff79ae68ab60dfb 305 PANTHER PTHR23309:SF17 1 301 2.3E-84 T 22-04-2016 JE55_RS15060 8c94c95e9462edda5ff79ae68ab60dfb 305 PIRSF PIRSF000105 1 257 1.1E-58 T 22-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 JE55_RS15060 8c94c95e9462edda5ff79ae68ab60dfb 305 Gene3D G3DSA:1.10.1040.10 181 222 4.6E-6 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS15060 8c94c95e9462edda5ff79ae68ab60dfb 305 SUPERFAMILY SSF51735 1 176 7.58E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS15060 8c94c95e9462edda5ff79ae68ab60dfb 305 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 174 4.0E-41 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS15060 8c94c95e9462edda5ff79ae68ab60dfb 305 Gene3D G3DSA:3.40.50.720 1 180 7.5E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS15060 8c94c95e9462edda5ff79ae68ab60dfb 305 PANTHER PTHR23309 1 301 2.3E-84 T 22-04-2016 JE55_RS15060 8c94c95e9462edda5ff79ae68ab60dfb 305 SUPERFAMILY SSF48179 179 252 6.46E-11 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS15060 8c94c95e9462edda5ff79ae68ab60dfb 305 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 179 248 5.7E-12 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 PANTHER PTHR10169 2 414 0.0 T 22-04-2016 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 PANTHER PTHR10169 459 819 0.0 T 22-04-2016 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Gene3D G3DSA:1.10.268.10 363 506 2.2E-48 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 513 2.4E-152 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 SMART SM00434 11 508 4.7E-284 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 853 29.289 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Gene3D G3DSA:2.120.10.90 540 849 5.0E-136 T 22-04-2016 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 SUPERFAMILY SSF56719 30 530 1.44E-178 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 547 594 7.2E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 654 697 3.1E-6 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 597 646 2.1E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 803 846 1.4E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 753 799 5.1E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 702 747 3.3E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 10 850 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Gene3D G3DSA:3.30.1360.40 236 333 4.7E-40 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 Gene3D G3DSA:3.90.199.10 34 216 7.7E-85 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 PANTHER PTHR10169:SF48 2 414 0.0 T 22-04-2016 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 PANTHER PTHR10169:SF48 459 819 0.0 T 22-04-2016 JE55_RS03625 96b512cdb61cc4b1953c87a71acc0e06 866 SUPERFAMILY SSF101904 542 861 3.27E-110 T 22-04-2016 JE55_RS07290 315ed9a7c792d62bdcb47b62ad49cda4 144 SUPERFAMILY SSF52080 4 142 1.14E-45 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P JE55_RS07290 315ed9a7c792d62bdcb47b62ad49cda4 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07290 315ed9a7c792d62bdcb47b62ad49cda4 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 142 6.6E-30 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P JE55_RS07290 315ed9a7c792d62bdcb47b62ad49cda4 144 PANTHER PTHR12934 1 142 1.1E-64 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 JE55_RS07290 315ed9a7c792d62bdcb47b62ad49cda4 144 Gene3D G3DSA:3.100.10.10 32 142 7.8E-25 T 22-04-2016 JE55_RS07290 315ed9a7c792d62bdcb47b62ad49cda4 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 143 20.012 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 JE55_RS07290 315ed9a7c792d62bdcb47b62ad49cda4 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 1.7E-47 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 JE55_RS14110 d5c7db1402e18f744a695371177c853c 413 Gene3D G3DSA:1.10.443.10 210 386 4.3E-22 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS14110 d5c7db1402e18f744a695371177c853c 413 SUPERFAMILY SSF56349 103 388 4.41E-42 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS14110 d5c7db1402e18f744a695371177c853c 413 PANTHER PTHR30629 6 402 1.4E-55 T 22-04-2016 JE55_RS14110 d5c7db1402e18f744a695371177c853c 413 PANTHER PTHR30629:SF2 6 402 1.4E-55 T 22-04-2016 JE55_RS14110 d5c7db1402e18f744a695371177c853c 413 Gene3D G3DSA:1.10.150.130 104 193 5.6E-5 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal JE55_RS14110 d5c7db1402e18f744a695371177c853c 413 Pfam PF13356 Domain of unknown function (DUF4102) 28 95 1.1E-12 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 JE55_RS14110 d5c7db1402e18f744a695371177c853c 413 Pfam PF00589 Phage integrase family 211 367 6.9E-14 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS11235 1f9fba795832750e17d23cd3b5f5ffbc 395 Pfam PF07690 Major Facilitator Superfamily 24 350 3.5E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS11235 1f9fba795832750e17d23cd3b5f5ffbc 395 Gene3D G3DSA:1.20.1250.20 214 394 6.9E-23 T 22-04-2016 JE55_RS11235 1f9fba795832750e17d23cd3b5f5ffbc 395 Gene3D G3DSA:1.20.1250.20 21 197 5.3E-27 T 22-04-2016 JE55_RS11235 1f9fba795832750e17d23cd3b5f5ffbc 395 PANTHER PTHR23504 3 392 6.0E-103 T 22-04-2016 JE55_RS11235 1f9fba795832750e17d23cd3b5f5ffbc 395 PRINTS PR01035 Tetracycline resistance protein signature 147 169 4.4E-6 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JE55_RS11235 1f9fba795832750e17d23cd3b5f5ffbc 395 PRINTS PR01035 Tetracycline resistance protein signature 28 44 4.4E-6 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JE55_RS11235 1f9fba795832750e17d23cd3b5f5ffbc 395 PRINTS PR01035 Tetracycline resistance protein signature 277 298 4.4E-6 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JE55_RS11235 1f9fba795832750e17d23cd3b5f5ffbc 395 PRINTS PR01035 Tetracycline resistance protein signature 56 75 4.4E-6 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 JE55_RS11235 1f9fba795832750e17d23cd3b5f5ffbc 395 PANTHER PTHR23504:SF37 3 392 6.0E-103 T 22-04-2016 JE55_RS11235 1f9fba795832750e17d23cd3b5f5ffbc 395 SUPERFAMILY SSF103473 17 393 1.44E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS07750 ce56feff5b0010e4ad2a27bca41a7f5c 318 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 37 102 1.6E-9 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JE55_RS07750 ce56feff5b0010e4ad2a27bca41a7f5c 318 PANTHER PTHR30349:SF11 36 301 1.6E-30 T 22-04-2016 JE55_RS07750 ce56feff5b0010e4ad2a27bca41a7f5c 318 Gene3D G3DSA:1.10.150.130 35 115 8.4E-15 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal JE55_RS07750 ce56feff5b0010e4ad2a27bca41a7f5c 318 SUPERFAMILY SSF56349 26 307 2.56E-40 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS07750 ce56feff5b0010e4ad2a27bca41a7f5c 318 Pfam PF00589 Phage integrase family 129 303 3.2E-21 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS07750 ce56feff5b0010e4ad2a27bca41a7f5c 318 PANTHER PTHR30349 36 301 1.6E-30 T 22-04-2016 JE55_RS07750 ce56feff5b0010e4ad2a27bca41a7f5c 318 Gene3D G3DSA:1.10.443.10 129 305 1.4E-31 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS04435 09e9768b86bce68fffa054d63721357a 282 Gene3D G3DSA:3.60.21.10 172 265 1.3E-46 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS04435 09e9768b86bce68fffa054d63721357a 282 Gene3D G3DSA:3.60.21.10 10 135 1.3E-46 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS04435 09e9768b86bce68fffa054d63721357a 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 12 263 4.4E-72 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 JE55_RS04435 09e9768b86bce68fffa054d63721357a 282 PANTHER PTHR24032:SF27 13 263 1.2E-86 T 22-04-2016 JE55_RS04435 09e9768b86bce68fffa054d63721357a 282 Pfam PF00149 Calcineurin-like phosphoesterase 11 125 6.6E-9 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 JE55_RS04435 09e9768b86bce68fffa054d63721357a 282 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 7 273 46.541 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 JE55_RS04435 09e9768b86bce68fffa054d63721357a 282 SUPERFAMILY SSF56300 8 259 1.29E-50 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS04435 09e9768b86bce68fffa054d63721357a 282 PANTHER PTHR24032 13 263 1.2E-86 T 22-04-2016 JE55_RS04435 09e9768b86bce68fffa054d63721357a 282 PIRSF PIRSF000903 7 280 1.9E-103 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 JE55_RS06120 b5a9e73b329d64e15f67e8557c775f48 330 Pfam PF00348 Polyprenyl synthetase 40 269 9.0E-75 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 JE55_RS06120 b5a9e73b329d64e15f67e8557c775f48 330 SUPERFAMILY SSF48576 13 329 1.23E-98 T 22-04-2016 IPR008949 Isoprenoid synthase domain JE55_RS06120 b5a9e73b329d64e15f67e8557c775f48 330 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 89 103 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 JE55_RS06120 b5a9e73b329d64e15f67e8557c775f48 330 PANTHER PTHR12001:SF47 14 330 4.7E-109 T 22-04-2016 JE55_RS06120 b5a9e73b329d64e15f67e8557c775f48 330 Gene3D G3DSA:1.10.600.10 14 329 1.5E-99 T 22-04-2016 IPR008949 Isoprenoid synthase domain JE55_RS06120 b5a9e73b329d64e15f67e8557c775f48 330 PANTHER PTHR12001 14 330 4.7E-109 T 22-04-2016 IPR017446 Polyprenyl synthetase-related JE55_RS16840 d2aab4bdaf50b021072cc4b14de21ecf 276 PANTHER PTHR24220:SF422 26 271 2.0E-133 T 22-04-2016 JE55_RS16840 d2aab4bdaf50b021072cc4b14de21ecf 276 Pfam PF00005 ABC transporter 45 186 7.4E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS16840 d2aab4bdaf50b021072cc4b14de21ecf 276 SMART SM00382 53 234 3.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS16840 d2aab4bdaf50b021072cc4b14de21ecf 276 SUPERFAMILY SSF52540 25 260 2.66E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16840 d2aab4bdaf50b021072cc4b14de21ecf 276 PANTHER PTHR24220 26 271 2.0E-133 T 22-04-2016 JE55_RS16840 d2aab4bdaf50b021072cc4b14de21ecf 276 Gene3D G3DSA:3.40.50.300 20 250 4.1E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16840 d2aab4bdaf50b021072cc4b14de21ecf 276 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 126 262 3.4E-43 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 SUPERFAMILY SSF51735 234 264 1.14E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 SUPERFAMILY SSF51735 1 124 1.14E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 263 7.1E-96 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 148 165 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 PIRSF PIRSF000161 1 265 6.4E-86 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 PANTHER PTHR20836:SF0 1 264 1.7E-91 T 22-04-2016 JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 263 34.533 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 Gene3D G3DSA:3.40.50.720 1 161 2.1E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 PANTHER PTHR20836 1 264 1.7E-91 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 SUPERFAMILY SSF55347 125 234 2.01E-38 T 22-04-2016 JE55_RS05790 01884abc7782cb00ef3eaff84b862b57 265 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 123 1.6E-38 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS05735 65580dd3de76b7103cf618591953b538 453 PANTHER PTHR30354:SF1 4 453 1.1E-202 T 22-04-2016 JE55_RS05735 65580dd3de76b7103cf618591953b538 453 Pfam PF02447 GntP family permease 8 451 4.0E-161 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 JE55_RS05735 65580dd3de76b7103cf618591953b538 453 PANTHER PTHR30354 4 453 1.1E-202 T 22-04-2016 JE55_RS05735 65580dd3de76b7103cf618591953b538 453 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 453 1.4E-151 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 JE55_RS05735 65580dd3de76b7103cf618591953b538 453 PIRSF PIRSF002746 4 453 3.8E-162 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 JE55_RS07145 7c65b2805ba854f9ef53bf0d615ee785 441 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 144 161 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 JE55_RS07145 7c65b2805ba854f9ef53bf0d615ee785 441 SUPERFAMILY SSF53850 28 429 1.6E-80 T 22-04-2016 JE55_RS07145 7c65b2805ba854f9ef53bf0d615ee785 441 PANTHER PTHR30061 27 438 2.6E-157 T 22-04-2016 JE55_RS07145 7c65b2805ba854f9ef53bf0d615ee785 441 Pfam PF13416 Bacterial extracellular solute-binding protein 46 369 3.6E-42 T 22-04-2016 JE55_RS07145 7c65b2805ba854f9ef53bf0d615ee785 441 Gene3D G3DSA:3.40.190.10 149 349 1.3E-42 T 22-04-2016 JE55_RS07145 7c65b2805ba854f9ef53bf0d615ee785 441 PANTHER PTHR30061:SF7 27 438 2.6E-157 T 22-04-2016 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 SMART SM00480 18 363 4.3E-107 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 SUPERFAMILY SSF55979 5 119 7.42E-21 T 22-04-2016 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 PANTHER PTHR30478 4 367 2.0E-112 T 22-04-2016 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 6 366 2.3E-95 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 131 244 1.5E-33 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 Gene3D G3DSA:3.10.150.10 250 367 2.4E-38 T 22-04-2016 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 Gene3D G3DSA:3.10.150.10 5 121 3.6E-24 T 22-04-2016 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 366 2.4E-32 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 PIRSF PIRSF000804 1 367 1.2E-110 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 Gene3D G3DSA:3.10.150.10 127 249 1.0E-35 T 22-04-2016 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 SUPERFAMILY SSF55979 129 245 6.28E-28 T 22-04-2016 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 6 119 4.1E-27 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS08980 2b1f04e3327a32917094f6f86f8b29b6 367 SUPERFAMILY SSF55979 246 367 1.79E-35 T 22-04-2016 JE55_RS04130 edfab3dc0fb4737a38057de1cb384941 145 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 20.401 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 JE55_RS04130 edfab3dc0fb4737a38057de1cb384941 145 PANTHER PTHR11078 1 138 1.7E-39 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 JE55_RS04130 edfab3dc0fb4737a38057de1cb384941 145 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 133 3.4E-38 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 JE55_RS04130 edfab3dc0fb4737a38057de1cb384941 145 SUPERFAMILY SSF48013 3 135 2.62E-40 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JE55_RS04130 edfab3dc0fb4737a38057de1cb384941 145 Pfam PF01029 NusB family 8 131 4.2E-32 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JE55_RS04130 edfab3dc0fb4737a38057de1cb384941 145 Gene3D G3DSA:1.10.940.10 4 138 1.4E-38 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 JE55_RS09080 a072157a4bd8167cb99a1c7dc26a43fa 186 Pfam PF13302 Acetyltransferase (GNAT) domain 10 145 4.5E-24 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS09080 a072157a4bd8167cb99a1c7dc26a43fa 186 SUPERFAMILY SSF55729 6 168 2.84E-42 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS09080 a072157a4bd8167cb99a1c7dc26a43fa 186 Gene3D G3DSA:3.40.630.30 6 169 4.6E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS09080 a072157a4bd8167cb99a1c7dc26a43fa 186 PANTHER PTHR13256 10 177 1.8E-68 T 22-04-2016 JE55_RS09080 a072157a4bd8167cb99a1c7dc26a43fa 186 PANTHER PTHR13256:SF21 10 177 1.8E-68 T 22-04-2016 JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 PRINTS PR00340 P-II protein signature 52 75 4.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 PRINTS PR00340 P-II protein signature 23 41 4.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 PRINTS PR00340 P-II protein signature 2 17 4.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 PRINTS PR00340 P-II protein signature 83 103 4.2E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 SMART SM00938 4 105 3.3E-66 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 SUPERFAMILY SSF54913 1 112 1.68E-45 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 Gene3D G3DSA:3.30.70.120 1 112 2.4E-49 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 PANTHER PTHR30115 1 112 1.5E-67 T 22-04-2016 JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.1E-43 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 PANTHER PTHR30115:SF12 1 112 1.5E-67 T 22-04-2016 JE55_RS13425 7d12db43f4b0d3f3e1dc528b8f3de027 112 PIRSF PIRSF039144 1 112 1.6E-55 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 JE55_RS01605 4acc003b7fd19d0fc738e71d2d68e948 433 Gene3D G3DSA:1.20.1250.20 247 420 6.2E-11 T 22-04-2016 JE55_RS01605 4acc003b7fd19d0fc738e71d2d68e948 433 Gene3D G3DSA:1.20.1250.20 31 207 2.2E-19 T 22-04-2016 JE55_RS01605 4acc003b7fd19d0fc738e71d2d68e948 433 Pfam PF05977 Transmembrane secretion effector 26 422 9.7E-114 T 22-04-2016 IPR010290 Transmembrane secretion effector JE55_RS01605 4acc003b7fd19d0fc738e71d2d68e948 433 SUPERFAMILY SSF103473 31 419 5.62E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS01605 4acc003b7fd19d0fc738e71d2d68e948 433 PANTHER PTHR23513 10 420 2.4E-86 T 22-04-2016 JE55_RS01605 4acc003b7fd19d0fc738e71d2d68e948 433 PANTHER PTHR23513:SF7 10 420 2.4E-86 T 22-04-2016 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 ProSitePatterns PS00099 Thiolases active site. 378 391 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 PANTHER PTHR18919:SF110 4 397 1.6E-219 T 22-04-2016 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 SUPERFAMILY SSF53901 276 396 5.76E-40 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 PANTHER PTHR18919 4 397 1.6E-219 T 22-04-2016 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 Gene3D G3DSA:3.40.47.10 147 199 2.3E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 Gene3D G3DSA:3.40.47.10 281 395 2.3E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 11 395 5.8E-123 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 Gene3D G3DSA:3.40.47.10 9 128 5.0E-69 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 Gene3D G3DSA:3.40.47.10 200 280 5.0E-69 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 Pfam PF00108 Thiolase, N-terminal domain 9 266 4.5E-84 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 Pfam PF02803 Thiolase, C-terminal domain 275 395 4.4E-41 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 SUPERFAMILY SSF53901 9 274 3.01E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10325 1729d31967c5726800d574a9216bbf76 397 PIRSF PIRSF000429 4 397 3.0E-108 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS10580 fdda4553e6098d59f21b918cc63187f5 401 Gene3D G3DSA:3.40.50.10540 310 401 9.0E-113 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS10580 fdda4553e6098d59f21b918cc63187f5 401 Gene3D G3DSA:3.40.50.10540 7 221 9.0E-113 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS10580 fdda4553e6098d59f21b918cc63187f5 401 PANTHER PTHR24023 29 388 9.0E-23 T 22-04-2016 JE55_RS10580 fdda4553e6098d59f21b918cc63187f5 401 PANTHER PTHR24023:SF593 29 388 9.0E-23 T 22-04-2016 JE55_RS10580 fdda4553e6098d59f21b918cc63187f5 401 SUPERFAMILY SSF89796 8 401 5.62E-136 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS10580 fdda4553e6098d59f21b918cc63187f5 401 Pfam PF02515 CoA-transferase family III 10 377 2.1E-126 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 JE55_RS10580 fdda4553e6098d59f21b918cc63187f5 401 Gene3D G3DSA:3.30.1540.10 227 309 4.3E-33 T 22-04-2016 JE55_RS12600 87e789705faaa21ddf7b20cd533acc45 294 SUPERFAMILY SSF103481 204 284 4.45E-13 T 22-04-2016 JE55_RS12600 87e789705faaa21ddf7b20cd533acc45 294 PANTHER PTHR32322 3 288 1.3E-89 T 22-04-2016 JE55_RS12600 87e789705faaa21ddf7b20cd533acc45 294 Pfam PF00892 EamA-like transporter family 142 280 7.2E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS12600 87e789705faaa21ddf7b20cd533acc45 294 Pfam PF00892 EamA-like transporter family 6 130 1.2E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS12600 87e789705faaa21ddf7b20cd533acc45 294 PANTHER PTHR32322:SF9 3 288 1.3E-89 T 22-04-2016 JE55_RS12600 87e789705faaa21ddf7b20cd533acc45 294 SUPERFAMILY SSF103481 40 136 4.97E-10 T 22-04-2016 JE55_RS29500 0d87b425ee121e5caa5a1615f2cbece4 99 PANTHER PTHR30193 1 98 7.5E-49 T 22-04-2016 JE55_RS29500 0d87b425ee121e5caa5a1615f2cbece4 99 PANTHER PTHR30193:SF28 1 98 7.5E-49 T 22-04-2016 JE55_RS29500 0d87b425ee121e5caa5a1615f2cbece4 99 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 3 86 2.0E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS29500 0d87b425ee121e5caa5a1615f2cbece4 99 SUPERFAMILY SSF161098 3 98 1.96E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS29500 0d87b425ee121e5caa5a1615f2cbece4 99 Gene3D G3DSA:1.10.3720.10 3 98 6.6E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS20575 30b9b88d34c339d03a9dd1bc09055a57 136 PANTHER PTHR11271 7 136 1.3E-47 T 22-04-2016 JE55_RS20575 30b9b88d34c339d03a9dd1bc09055a57 136 Pfam PF01979 Amidohydrolase family 43 120 5.8E-9 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 JE55_RS20575 30b9b88d34c339d03a9dd1bc09055a57 136 Gene3D G3DSA:3.20.20.140 49 125 2.7E-19 T 22-04-2016 JE55_RS20575 30b9b88d34c339d03a9dd1bc09055a57 136 PANTHER PTHR11271:SF4 7 136 1.3E-47 T 22-04-2016 IPR010252 Formiminoglutamate deiminase JE55_RS20575 30b9b88d34c339d03a9dd1bc09055a57 136 SUPERFAMILY SSF51556 45 128 8.26E-21 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS06000 2141d584889b7df128e518e13791ec67 150 PANTHER PTHR21272 1 150 8.2E-91 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 JE55_RS06000 2141d584889b7df128e518e13791ec67 150 Gene3D G3DSA:3.40.50.9100 2 145 7.7E-68 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 JE55_RS06000 2141d584889b7df128e518e13791ec67 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 74.417 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 JE55_RS06000 2141d584889b7df128e518e13791ec67 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 143 1.6E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 JE55_RS06000 2141d584889b7df128e518e13791ec67 150 Pfam PF01220 Dehydroquinase class II 4 140 1.4E-60 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 JE55_RS06000 2141d584889b7df128e518e13791ec67 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 141 5.0E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 JE55_RS06000 2141d584889b7df128e518e13791ec67 150 SUPERFAMILY SSF52304 3 146 1.44E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 JE55_RS06000 2141d584889b7df128e518e13791ec67 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 JE55_RS06000 2141d584889b7df128e518e13791ec67 150 PIRSF PIRSF001399 1 147 1.4E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 JE55_RS12440 a51398b2104c2993ab665bac28bfd502 442 Gene3D G3DSA:3.40.190.10 150 355 1.2E-51 T 22-04-2016 JE55_RS12440 a51398b2104c2993ab665bac28bfd502 442 PANTHER PTHR30061 3 442 4.1E-136 T 22-04-2016 JE55_RS12440 a51398b2104c2993ab665bac28bfd502 442 SUPERFAMILY SSF53850 30 413 1.53E-77 T 22-04-2016 JE55_RS12440 a51398b2104c2993ab665bac28bfd502 442 Pfam PF01547 Bacterial extracellular solute-binding protein 46 332 1.6E-49 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 JE55_RS12440 a51398b2104c2993ab665bac28bfd502 442 PANTHER PTHR30061:SF3 3 442 4.1E-136 T 22-04-2016 JE55_RS12440 a51398b2104c2993ab665bac28bfd502 442 Gene3D G3DSA:3.40.190.10 28 149 7.8E-4 T 22-04-2016 JE55_RS00975 e7fd6da750f5f828c2868c990c93013f 170 PANTHER PTHR21221:SF2 1 156 5.8E-51 T 22-04-2016 JE55_RS00975 e7fd6da750f5f828c2868c990c93013f 170 SUPERFAMILY SSF51182 1 160 1.78E-58 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS00975 e7fd6da750f5f828c2868c990c93013f 170 PANTHER PTHR21221 1 156 5.8E-51 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 JE55_RS00975 e7fd6da750f5f828c2868c990c93013f 170 PIRSF PIRSF017306 1 159 1.9E-42 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 JE55_RS00975 e7fd6da750f5f828c2868c990c93013f 170 Gene3D G3DSA:2.60.120.480 2 160 1.8E-60 T 22-04-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 JE55_RS00975 e7fd6da750f5f828c2868c990c93013f 170 Hamap MF_00616 Ureidoglycolate lyase [allA]. 2 162 40.299 T 22-04-2016 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 JE55_RS00975 e7fd6da750f5f828c2868c990c93013f 170 Pfam PF04115 Ureidoglycolate lyase 1 158 2.3E-54 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 JE55_RS01765 3f01b0d772e8dd29b818e6316aa76552 236 Pfam PF15579 Immunity protein 52 130 230 7.2E-36 T 22-04-2016 IPR028969 Immunity protein 52 JE55_RS01765 3f01b0d772e8dd29b818e6316aa76552 236 PIRSF PIRSF029636 1 236 5.9E-70 T 22-04-2016 IPR016929 Uncharacterised conserved protein UCP029636 JE55_RS29715 50bbac3c070a5979e56f7e3714dd95b8 100 PANTHER PTHR28026 1 99 1.0E-27 T 22-04-2016 JE55_RS29715 50bbac3c070a5979e56f7e3714dd95b8 100 Pfam PF06127 Protein of unknown function (DUF962) 19 82 5.0E-13 T 22-04-2016 IPR009305 Protein of unknown function DUF962 JE55_RS29715 50bbac3c070a5979e56f7e3714dd95b8 100 PANTHER PTHR28026:SF3 1 99 1.0E-27 T 22-04-2016 JE55_RS09700 cbe07a97cde4b7064e0872d833efb34d 359 Gene3D G3DSA:2.40.100.10 209 325 2.7E-9 T 22-04-2016 IPR029000 Cyclophilin-like domain JE55_RS09700 cbe07a97cde4b7064e0872d833efb34d 359 Pfam PF02626 Allophanate hydrolase subunit 2 32 316 1.1E-91 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B JE55_RS09700 cbe07a97cde4b7064e0872d833efb34d 359 SUPERFAMILY SSF50891 209 319 1.74E-15 T 22-04-2016 IPR029000 Cyclophilin-like domain JE55_RS09700 cbe07a97cde4b7064e0872d833efb34d 359 SMART SM00797 31 333 1.9E-146 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B JE55_RS09700 cbe07a97cde4b7064e0872d833efb34d 359 PANTHER PTHR18866 177 355 9.0E-36 T 22-04-2016 JE55_RS09700 cbe07a97cde4b7064e0872d833efb34d 359 PANTHER PTHR18866:SF74 177 355 9.0E-36 T 22-04-2016 JE55_RS09700 cbe07a97cde4b7064e0872d833efb34d 359 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 10 343 1.5E-100 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B JE55_RS04475 e2db16c4cddfee242d7ae92de884bf68 56 PIRSF PIRSF000071 1 56 4.2E-26 T 22-04-2016 IPR024922 Rubredoxin GO:0005506|GO:0009055 JE55_RS04475 e2db16c4cddfee242d7ae92de884bf68 56 Pfam PF00301 Rubredoxin 6 51 8.9E-23 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 JE55_RS04475 e2db16c4cddfee242d7ae92de884bf68 56 Gene3D G3DSA:2.20.28.10 2 55 2.2E-26 T 22-04-2016 IPR004039 Rubredoxin-type fold JE55_RS04475 e2db16c4cddfee242d7ae92de884bf68 56 SUPERFAMILY SSF57802 2 55 3.03E-23 T 22-04-2016 JE55_RS04475 e2db16c4cddfee242d7ae92de884bf68 56 PRINTS PR00163 Rubredoxin signature 5 21 8.3E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 JE55_RS04475 e2db16c4cddfee242d7ae92de884bf68 56 PRINTS PR00163 Rubredoxin signature 35 51 8.3E-8 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 JE55_RS04475 e2db16c4cddfee242d7ae92de884bf68 56 ProSitePatterns PS00202 Rubredoxin signature. 35 45 - T 22-04-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 JE55_RS09345 8f10465eb9be5a9605eaca994e4ef8de 354 PANTHER PTHR11695:SF582 16 354 9.6E-169 T 22-04-2016 JE55_RS09345 8f10465eb9be5a9605eaca994e4ef8de 354 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 JE55_RS09345 8f10465eb9be5a9605eaca994e4ef8de 354 Gene3D G3DSA:3.90.180.10 2 180 2.9E-61 T 22-04-2016 IPR011032 GroES-like JE55_RS09345 8f10465eb9be5a9605eaca994e4ef8de 354 SUPERFAMILY SSF51735 149 313 1.97E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS09345 8f10465eb9be5a9605eaca994e4ef8de 354 Gene3D G3DSA:3.40.50.720 181 293 1.4E-21 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS09345 8f10465eb9be5a9605eaca994e4ef8de 354 SMART SM00829 9 343 5.3E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JE55_RS09345 8f10465eb9be5a9605eaca994e4ef8de 354 SUPERFAMILY SSF50129 7 173 1.23E-49 T 22-04-2016 IPR011032 GroES-like JE55_RS09345 8f10465eb9be5a9605eaca994e4ef8de 354 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 207 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JE55_RS09345 8f10465eb9be5a9605eaca994e4ef8de 354 PANTHER PTHR11695 16 354 9.6E-169 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 JE55_RS09345 8f10465eb9be5a9605eaca994e4ef8de 354 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 144 1.0E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JE55_RS09345 8f10465eb9be5a9605eaca994e4ef8de 354 Pfam PF00107 Zinc-binding dehydrogenase 186 309 2.8E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 SUPERFAMILY SSF53850 92 277 8.14E-22 T 22-04-2016 JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 Gene3D G3DSA:3.40.190.10 92 171 9.0E-6 T 22-04-2016 JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 Gene3D G3DSA:1.10.10.10 1 83 3.3E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 SUPERFAMILY SSF46785 1 84 3.73E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 PANTHER PTHR30126 1 312 7.5E-79 T 22-04-2016 JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 Pfam PF03466 LysR substrate binding domain 91 312 2.9E-20 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 PANTHER PTHR30126:SF2 1 312 7.5E-79 T 22-04-2016 JE55_RS05715 71ec839c2db064e07e504eab50a56998 316 Gene3D G3DSA:3.40.190.10 221 265 3.7E-8 T 22-04-2016 JE55_RS11200 3e7bc9dfc9d90b1b872742bcae9a7287 669 SUPERFAMILY SSF51735 410 552 1.35E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS11200 3e7bc9dfc9d90b1b872742bcae9a7287 669 Pfam PF00999 Sodium/hydrogen exchanger family 8 377 3.6E-69 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JE55_RS11200 3e7bc9dfc9d90b1b872742bcae9a7287 669 Gene3D G3DSA:3.30.70.1450 585 656 7.3E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JE55_RS11200 3e7bc9dfc9d90b1b872742bcae9a7287 669 Gene3D G3DSA:3.40.50.720 408 542 1.9E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS11200 3e7bc9dfc9d90b1b872742bcae9a7287 669 PANTHER PTHR16254 8 571 2.1E-165 T 22-04-2016 JE55_RS11200 3e7bc9dfc9d90b1b872742bcae9a7287 669 SUPERFAMILY SSF116726 574 655 5.49E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JE55_RS11200 3e7bc9dfc9d90b1b872742bcae9a7287 669 Pfam PF02080 TrkA-C domain 589 656 7.4E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JE55_RS11200 3e7bc9dfc9d90b1b872742bcae9a7287 669 Pfam PF02254 TrkA-N domain 414 527 1.2E-22 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JE55_RS14440 079e38efb0cf4b6471931bacfaebaeee 218 PANTHER PTHR33269:SF1 1 198 3.9E-54 T 22-04-2016 JE55_RS14440 079e38efb0cf4b6471931bacfaebaeee 218 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 19 167 4.4E-35 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 JE55_RS14440 079e38efb0cf4b6471931bacfaebaeee 218 PANTHER PTHR33269 1 198 3.9E-54 T 22-04-2016 JE55_RS13490 d3125c6613a5ec286b348d2b93c16279 446 PANTHER PTHR24220 26 304 4.1E-129 T 22-04-2016 JE55_RS13490 d3125c6613a5ec286b348d2b93c16279 446 PANTHER PTHR24220 325 434 4.1E-129 T 22-04-2016 JE55_RS13490 d3125c6613a5ec286b348d2b93c16279 446 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS13490 d3125c6613a5ec286b348d2b93c16279 446 Gene3D G3DSA:3.40.50.300 17 243 1.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13490 d3125c6613a5ec286b348d2b93c16279 446 SUPERFAMILY SSF52540 24 265 1.5E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13490 d3125c6613a5ec286b348d2b93c16279 446 SMART SM00382 53 235 5.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS13490 d3125c6613a5ec286b348d2b93c16279 446 Pfam PF09821 C-terminal AAA-associated domain 315 433 5.7E-43 T 22-04-2016 IPR018632 C-terminal AAA-associated domain JE55_RS13490 d3125c6613a5ec286b348d2b93c16279 446 Pfam PF00005 ABC transporter 44 183 4.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS13490 d3125c6613a5ec286b348d2b93c16279 446 PANTHER PTHR24220:SF589 26 304 4.1E-129 T 22-04-2016 JE55_RS13490 d3125c6613a5ec286b348d2b93c16279 446 PANTHER PTHR24220:SF589 325 434 4.1E-129 T 22-04-2016 JE55_RS28185 e8590366119ab9eae7b8696ca20a96f2 414 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 299 413 3.7E-18 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 JE55_RS28185 e8590366119ab9eae7b8696ca20a96f2 414 SUPERFAMILY SSF51197 273 414 6.87E-31 T 22-04-2016 JE55_RS28185 e8590366119ab9eae7b8696ca20a96f2 414 PANTHER PTHR10696 270 412 2.2E-21 T 22-04-2016 JE55_RS28185 e8590366119ab9eae7b8696ca20a96f2 414 PANTHER PTHR10696:SF21 270 412 2.2E-21 T 22-04-2016 JE55_RS28185 e8590366119ab9eae7b8696ca20a96f2 414 Gene3D G3DSA:3.60.130.10 282 413 1.3E-21 T 22-04-2016 JE55_RS15250 33d78b92d4ecc2e898bf3b35ebaa79da 328 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 27 320 1.2E-90 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 JE55_RS15250 33d78b92d4ecc2e898bf3b35ebaa79da 328 PANTHER PTHR30425:SF1 14 328 2.1E-148 T 22-04-2016 JE55_RS15250 33d78b92d4ecc2e898bf3b35ebaa79da 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 317 2.0E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS15250 33d78b92d4ecc2e898bf3b35ebaa79da 328 SUPERFAMILY SSF161098 37 313 9.03E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS15250 33d78b92d4ecc2e898bf3b35ebaa79da 328 PANTHER PTHR30425 14 328 2.1E-148 T 22-04-2016 JE55_RS15250 33d78b92d4ecc2e898bf3b35ebaa79da 328 Gene3D G3DSA:1.10.3720.10 31 324 2.9E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS11680 e812d742821f6ab1dd42cd12a092954c 344 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 41 334 3.6E-106 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 JE55_RS11680 e812d742821f6ab1dd42cd12a092954c 344 PANTHER PTHR30004:SF5 4 341 1.5E-145 T 22-04-2016 JE55_RS11680 e812d742821f6ab1dd42cd12a092954c 344 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 9 338 2.6E-124 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 JE55_RS11680 e812d742821f6ab1dd42cd12a092954c 344 SUPERFAMILY SSF53659 8 341 5.6E-106 T 22-04-2016 JE55_RS11680 e812d742821f6ab1dd42cd12a092954c 344 Gene3D G3DSA:3.40.718.10 5 342 8.6E-133 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 JE55_RS11680 e812d742821f6ab1dd42cd12a092954c 344 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 6 338 36.24 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 JE55_RS11680 e812d742821f6ab1dd42cd12a092954c 344 PANTHER PTHR30004 4 341 1.5E-145 T 22-04-2016 JE55_RS00945 c026ffba122411c782ebc76f8fc01936 312 PIRSF PIRSF000103 12 312 1.4E-66 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 JE55_RS00945 c026ffba122411c782ebc76f8fc01936 312 PANTHER PTHR22981:SF48 20 305 3.0E-94 T 22-04-2016 JE55_RS00945 c026ffba122411c782ebc76f8fc01936 312 Gene3D G3DSA:1.10.1040.10 186 308 1.1E-31 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS00945 c026ffba122411c782ebc76f8fc01936 312 Gene3D G3DSA:3.40.50.720 12 185 4.8E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00945 c026ffba122411c782ebc76f8fc01936 312 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 184 302 2.0E-24 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JE55_RS00945 c026ffba122411c782ebc76f8fc01936 312 PANTHER PTHR22981 20 305 3.0E-94 T 22-04-2016 JE55_RS00945 c026ffba122411c782ebc76f8fc01936 312 SUPERFAMILY SSF48179 182 308 7.25E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS00945 c026ffba122411c782ebc76f8fc01936 312 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 19 181 1.3E-41 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 JE55_RS00945 c026ffba122411c782ebc76f8fc01936 312 SUPERFAMILY SSF51735 18 182 2.27E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS16380 c4e43f6869173fa8511d1deb658cd57d 365 PANTHER PTHR12169 1 358 1.4E-149 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 JE55_RS16380 c4e43f6869173fa8511d1deb658cd57d 365 SUPERFAMILY SSF52540 49 181 6.23E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16380 c4e43f6869173fa8511d1deb658cd57d 365 PANTHER PTHR12169:SF11 1 358 1.4E-149 T 22-04-2016 JE55_RS16380 c4e43f6869173fa8511d1deb658cd57d 365 Gene3D G3DSA:3.40.50.300 11 170 4.6E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16380 c4e43f6869173fa8511d1deb658cd57d 365 Pfam PF03969 AFG1-like ATPase 3 354 5.0E-128 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 Gene3D G3DSA:3.40.309.10 887 1064 3.7E-43 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 PANTHER PTHR11699 616 1093 7.7E-174 T 22-04-2016 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 Gene3D G3DSA:1.20.5.550 87 137 3.2E-24 T 22-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 SUPERFAMILY SSF81935 88 257 4.18E-64 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 Pfam PF00171 Aldehyde dehydrogenase family 651 1096 5.4E-113 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 PIRSF PIRSF000197 74 1309 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 SUPERFAMILY SSF51730 258 606 1.96E-120 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 144 255 2.8E-46 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 Gene3D G3DSA:3.40.605.10 648 886 1.8E-70 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 SUPERFAMILY SSF47598 4 45 1.0E-8 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 SUPERFAMILY SSF53720 647 1098 7.33E-127 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 599 1098 3.7E-239 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 PANTHER PTHR11699:SF18 616 1093 7.7E-174 T 22-04-2016 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 Pfam PF01619 Proline dehydrogenase 266 562 4.9E-99 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 900 911 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 SUPERFAMILY SSF53720 1143 1292 1.7E-6 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 Gene3D G3DSA:1.10.2060.10 138 256 2.3E-53 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 JE55_RS08375 2d74416603140dfd87e5d8f05c50aa5b 1309 Gene3D G3DSA:3.20.20.220 257 605 3.4E-120 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like JE55_RS02400 c30a46cf8d7c472684581935bcfb86ce 444 PANTHER PTHR20852 1 444 1.2E-208 T 22-04-2016 JE55_RS02400 c30a46cf8d7c472684581935bcfb86ce 444 Gene3D G3DSA:3.30.590.10 111 429 3.5E-95 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 JE55_RS02400 c30a46cf8d7c472684581935bcfb86ce 444 SUPERFAMILY SSF55931 107 441 6.57E-109 T 22-04-2016 JE55_RS02400 c30a46cf8d7c472684581935bcfb86ce 444 SUPERFAMILY SSF54368 2 106 2.09E-21 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02400 c30a46cf8d7c472684581935bcfb86ce 444 SMART SM01230 107 363 8.3E-117 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02400 c30a46cf8d7c472684581935bcfb86ce 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 243 258 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02400 c30a46cf8d7c472684581935bcfb86ce 444 Gene3D G3DSA:3.10.20.70 2 110 8.5E-19 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS02400 c30a46cf8d7c472684581935bcfb86ce 444 PANTHER PTHR20852:SF63 1 444 1.2E-208 T 22-04-2016 JE55_RS02400 c30a46cf8d7c472684581935bcfb86ce 444 Pfam PF00120 Glutamine synthetase, catalytic domain 108 438 1.2E-106 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 JE55_RS12585 9614a0b3735eb981a4490eeee6881a8b 288 Gene3D G3DSA:3.40.50.720 17 283 5.9E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12585 9614a0b3735eb981a4490eeee6881a8b 288 Pfam PF00899 ThiF family 36 283 2.9E-33 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JE55_RS12585 9614a0b3735eb981a4490eeee6881a8b 288 SUPERFAMILY SSF69572 20 283 7.85E-58 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JE55_RS12585 9614a0b3735eb981a4490eeee6881a8b 288 PANTHER PTHR10953 214 288 1.3E-91 T 22-04-2016 JE55_RS12585 9614a0b3735eb981a4490eeee6881a8b 288 PANTHER PTHR10953 27 181 1.3E-91 T 22-04-2016 JE55_RS12585 9614a0b3735eb981a4490eeee6881a8b 288 PANTHER PTHR10953:SF159 214 288 1.3E-91 T 22-04-2016 JE55_RS12585 9614a0b3735eb981a4490eeee6881a8b 288 PANTHER PTHR10953:SF159 27 181 1.3E-91 T 22-04-2016 JE55_RS28080 784bac80292180c8d83b23f63db7d697 137 PANTHER PTHR12151 1 137 7.2E-46 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC JE55_RS28080 784bac80292180c8d83b23f63db7d697 137 SUPERFAMILY SSF52833 2 136 1.03E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS28080 784bac80292180c8d83b23f63db7d697 137 Gene3D G3DSA:3.40.30.10 1 137 1.4E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS28080 784bac80292180c8d83b23f63db7d697 137 Pfam PF02630 SCO1/SenC 2 119 6.0E-35 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC JE55_RS12295 83bc2784aabda4d779396042d6047555 398 Pfam PF02222 ATP-grasp domain 122 294 4.5E-47 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 JE55_RS12295 83bc2784aabda4d779396042d6047555 398 SUPERFAMILY SSF52440 8 109 2.45E-25 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS12295 83bc2784aabda4d779396042d6047555 398 Gene3D G3DSA:3.40.50.20 11 120 6.5E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS12295 83bc2784aabda4d779396042d6047555 398 PANTHER PTHR11609:SF5 11 383 2.7E-124 T 22-04-2016 JE55_RS12295 83bc2784aabda4d779396042d6047555 398 SUPERFAMILY SSF51246 317 393 1.1E-15 T 22-04-2016 IPR011054 Rudiment single hybrid motif JE55_RS12295 83bc2784aabda4d779396042d6047555 398 SUPERFAMILY SSF56059 112 314 1.62E-56 T 22-04-2016 JE55_RS12295 83bc2784aabda4d779396042d6047555 398 PANTHER PTHR11609 11 383 2.7E-124 T 22-04-2016 JE55_RS12295 83bc2784aabda4d779396042d6047555 398 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 16 379 40.847 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 JE55_RS12295 83bc2784aabda4d779396042d6047555 398 Gene3D G3DSA:3.30.470.20 155 395 4.6E-84 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS12295 83bc2784aabda4d779396042d6047555 398 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 17 381 7.2E-115 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 JE55_RS04915 08989eff680671b61fb8c3d56ba3f7a1 178 PANTHER PTHR23416 28 168 1.3E-28 T 22-04-2016 JE55_RS04915 08989eff680671b61fb8c3d56ba3f7a1 178 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 107 6.0E-4 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS04915 08989eff680671b61fb8c3d56ba3f7a1 178 PIRSF PIRSF000441 4 178 2.0E-42 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 JE55_RS04915 08989eff680671b61fb8c3d56ba3f7a1 178 PANTHER PTHR23416:SF55 28 168 1.3E-28 T 22-04-2016 JE55_RS04915 08989eff680671b61fb8c3d56ba3f7a1 178 Gene3D G3DSA:2.160.10.10 70 175 2.9E-27 T 22-04-2016 JE55_RS04915 08989eff680671b61fb8c3d56ba3f7a1 178 SUPERFAMILY SSF51161 33 169 2.63E-33 T 22-04-2016 IPR011004 Trimeric LpxA-like JE55_RS06185 ab736e9e64cb1fbe7949cbca53514c8c 89 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 40 6.3E-7 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 JE55_RS17400 e3b330345c3a98a97e9113a1c5a280b9 404 Pfam PF00764 Arginosuccinate synthase 8 390 5.9E-123 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS17400 e3b330345c3a98a97e9113a1c5a280b9 404 PANTHER PTHR11587:SF2 1 403 7.9E-172 T 22-04-2016 JE55_RS17400 e3b330345c3a98a97e9113a1c5a280b9 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS17400 e3b330345c3a98a97e9113a1c5a280b9 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 391 7.9E-119 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS17400 e3b330345c3a98a97e9113a1c5a280b9 404 SUPERFAMILY SSF69864 175 395 2.09E-71 T 22-04-2016 JE55_RS17400 e3b330345c3a98a97e9113a1c5a280b9 404 PANTHER PTHR11587 1 403 7.9E-172 T 22-04-2016 JE55_RS17400 e3b330345c3a98a97e9113a1c5a280b9 404 Gene3D G3DSA:3.90.1260.10 176 397 1.6E-72 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS17400 e3b330345c3a98a97e9113a1c5a280b9 404 Gene3D G3DSA:3.40.50.620 5 172 7.9E-56 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS17400 e3b330345c3a98a97e9113a1c5a280b9 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 398 41.781 T 22-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS17400 e3b330345c3a98a97e9113a1c5a280b9 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS17400 e3b330345c3a98a97e9113a1c5a280b9 404 SUPERFAMILY SSF52402 4 167 5.82E-42 T 22-04-2016 JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 Gene3D G3DSA:3.40.190.10 90 174 3.2E-29 T 22-04-2016 JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.9E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 Gene3D G3DSA:3.40.190.10 175 279 7.9E-47 T 22-04-2016 JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 Pfam PF03466 LysR substrate binding domain 89 303 2.6E-40 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 PANTHER PTHR30346 4 321 2.6E-92 T 22-04-2016 JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 PANTHER PTHR30346:SF6 4 321 2.6E-92 T 22-04-2016 JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.6E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 SUPERFAMILY SSF53850 90 306 1.59E-36 T 22-04-2016 JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 Gene3D G3DSA:1.10.10.10 4 80 1.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13140 d56b236cf45bff214881e78dcc06e68b 341 SUPERFAMILY SSF46785 4 86 5.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02395 b1b9edc72a948753bc431a0634ae5a7b 475 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 275 312 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS02395 b1b9edc72a948753bc431a0634ae5a7b 475 Gene3D G3DSA:3.40.640.10 88 361 9.2E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS02395 b1b9edc72a948753bc431a0634ae5a7b 475 PANTHER PTHR11986:SF81 53 473 1.9E-146 T 22-04-2016 JE55_RS02395 b1b9edc72a948753bc431a0634ae5a7b 475 SUPERFAMILY SSF53383 35 466 3.68E-121 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS02395 b1b9edc72a948753bc431a0634ae5a7b 475 Pfam PF00202 Aminotransferase class-III 52 465 3.8E-99 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS02395 b1b9edc72a948753bc431a0634ae5a7b 475 PANTHER PTHR11986 53 473 1.9E-146 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS02395 b1b9edc72a948753bc431a0634ae5a7b 475 Gene3D G3DSA:3.90.1150.10 27 86 1.5E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS02395 b1b9edc72a948753bc431a0634ae5a7b 475 Gene3D G3DSA:3.90.1150.10 363 469 1.5E-47 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS14670 7695e41c01fcb8d95afc7989ead5936f 262 Gene3D G3DSA:1.10.760.10 94 167 2.9E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14670 7695e41c01fcb8d95afc7989ead5936f 262 Pfam PF00034 Cytochrome c 96 164 2.2E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14670 7695e41c01fcb8d95afc7989ead5936f 262 Pfam PF00034 Cytochrome c 193 257 1.5E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14670 7695e41c01fcb8d95afc7989ead5936f 262 Gene3D G3DSA:1.10.760.10 183 260 8.6E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14670 7695e41c01fcb8d95afc7989ead5936f 262 SUPERFAMILY SSF46626 193 261 1.32E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14670 7695e41c01fcb8d95afc7989ead5936f 262 SUPERFAMILY SSF46626 95 166 9.9E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14670 7695e41c01fcb8d95afc7989ead5936f 262 PANTHER PTHR33751 1 260 1.4E-61 T 22-04-2016 JE55_RS14670 7695e41c01fcb8d95afc7989ead5936f 262 PANTHER PTHR33751:SF3 1 260 1.4E-61 T 22-04-2016 JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 PANTHER PTHR10381 26 217 4.1E-134 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 25 214 1.7E-105 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 135 148 - T 22-04-2016 IPR033135 ClpP, histidine active site JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 PANTHER PTHR10381:SF22 26 217 4.1E-134 T 22-04-2016 JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 113 124 - T 22-04-2016 IPR018215 ClpP, Ser active site JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 Gene3D G3DSA:3.90.226.10 26 214 6.3E-88 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 Pfam PF00574 Clp protease 36 215 1.7E-88 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 26 216 44.843 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 PRINTS PR00127 Clp protease catalytic subunit P signature 82 102 1.8E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 PRINTS PR00127 Clp protease catalytic subunit P signature 134 153 1.8E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 PRINTS PR00127 Clp protease catalytic subunit P signature 113 130 1.8E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 PRINTS PR00127 Clp protease catalytic subunit P signature 42 57 1.8E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 PRINTS PR00127 Clp protease catalytic subunit P signature 191 210 1.8E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JE55_RS00740 a46de9973a39200426bf35c5d1786659 217 SUPERFAMILY SSF52096 35 215 3.85E-74 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS07960 91788acef08be6bb252479b336a9253b 126 SUPERFAMILY SSF52172 4 120 2.56E-33 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS07960 91788acef08be6bb252479b336a9253b 126 Pfam PF00072 Response regulator receiver domain 5 116 3.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS07960 91788acef08be6bb252479b336a9253b 126 Gene3D G3DSA:3.40.50.2300 4 122 1.3E-32 T 22-04-2016 JE55_RS07960 91788acef08be6bb252479b336a9253b 126 PANTHER PTHR26402 3 119 2.6E-33 T 22-04-2016 JE55_RS07960 91788acef08be6bb252479b336a9253b 126 SMART SM00448 3 116 1.1E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS13120 e4c513f9d1f016bdfa052176a451c8df 138 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 131 1.2E-39 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 JE55_RS13120 e4c513f9d1f016bdfa052176a451c8df 138 Gene3D G3DSA:3.40.50.10110 1 136 3.6E-44 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 JE55_RS13120 e4c513f9d1f016bdfa052176a451c8df 138 SUPERFAMILY SSF102400 1 136 6.93E-43 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 JE55_RS13120 e4c513f9d1f016bdfa052176a451c8df 138 PANTHER PTHR38767 7 134 2.5E-17 T 22-04-2016 JE55_RS07590 43f5d2035e128c714720f5ec2b77442f 198 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 58 194 1.2E-32 T 22-04-2016 IPR005247 YbhB/YbcL JE55_RS07590 43f5d2035e128c714720f5ec2b77442f 198 Gene3D G3DSA:3.90.280.10 41 198 2.5E-48 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein JE55_RS07590 43f5d2035e128c714720f5ec2b77442f 198 SUPERFAMILY SSF49777 43 196 1.18E-45 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein JE55_RS07590 43f5d2035e128c714720f5ec2b77442f 198 PANTHER PTHR30289 40 198 2.9E-48 T 22-04-2016 JE55_RS07590 43f5d2035e128c714720f5ec2b77442f 198 PANTHER PTHR30289:SF0 40 198 2.9E-48 T 22-04-2016 JE55_RS07590 43f5d2035e128c714720f5ec2b77442f 198 Pfam PF01161 Phosphatidylethanolamine-binding protein 66 196 8.3E-33 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein JE55_RS10120 93ef05f7442cb2b12b4bced0526b8b13 313 SUPERFAMILY SSF51735 97 278 1.06E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10120 93ef05f7442cb2b12b4bced0526b8b13 313 Gene3D G3DSA:3.40.50.720 98 278 1.8E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10120 93ef05f7442cb2b12b4bced0526b8b13 313 PANTHER PTHR10996:SF114 1 311 1.1E-103 T 22-04-2016 JE55_RS10120 93ef05f7442cb2b12b4bced0526b8b13 313 PANTHER PTHR10996 1 311 1.1E-103 T 22-04-2016 JE55_RS10120 93ef05f7442cb2b12b4bced0526b8b13 313 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 140 167 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JE55_RS10120 93ef05f7442cb2b12b4bced0526b8b13 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 277 3.8E-43 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JE55_RS10120 93ef05f7442cb2b12b4bced0526b8b13 313 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 217 233 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JE55_RS05140 0824a6651e89711328bdc987894928c8 228 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 4 208 6.7E-38 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial JE55_RS05140 0824a6651e89711328bdc987894928c8 228 Gene3D G3DSA:3.40.50.1000 82 225 1.4E-50 T 22-04-2016 IPR023214 HAD-like domain JE55_RS05140 0824a6651e89711328bdc987894928c8 228 PANTHER PTHR10000 3 224 3.4E-52 T 22-04-2016 JE55_RS05140 0824a6651e89711328bdc987894928c8 228 PANTHER PTHR10000:SF10 3 224 3.4E-52 T 22-04-2016 JE55_RS05140 0824a6651e89711328bdc987894928c8 228 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 4 198 1.5E-22 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 JE55_RS05140 0824a6651e89711328bdc987894928c8 228 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 196 5.8E-41 T 22-04-2016 JE55_RS05140 0824a6651e89711328bdc987894928c8 228 SUPERFAMILY SSF56784 2 221 9.79E-34 T 22-04-2016 IPR023214 HAD-like domain JE55_RS05140 0824a6651e89711328bdc987894928c8 228 Gene3D G3DSA:1.20.1440.100 16 81 1.5E-34 T 22-04-2016 JE55_RS05390 9b0629381055ccf247ec3975015417a4 360 Gene3D G3DSA:2.40.10.240 69 137 2.9E-11 T 22-04-2016 JE55_RS05390 9b0629381055ccf247ec3975015417a4 360 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 346 9.7E-121 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS05390 9b0629381055ccf247ec3975015417a4 360 PANTHER PTHR30307 4 353 2.7E-149 T 22-04-2016 JE55_RS05390 9b0629381055ccf247ec3975015417a4 360 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 2 347 44.65 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS05390 9b0629381055ccf247ec3975015417a4 360 Pfam PF02547 Queuosine biosynthesis protein 4 346 5.6E-126 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS05390 9b0629381055ccf247ec3975015417a4 360 PANTHER PTHR30307:SF0 4 353 2.7E-149 T 22-04-2016 JE55_RS05390 9b0629381055ccf247ec3975015417a4 360 SUPERFAMILY SSF111337 3 346 3.92E-124 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS05390 9b0629381055ccf247ec3975015417a4 360 Gene3D G3DSA:3.40.1780.10 3 67 2.6E-94 T 22-04-2016 JE55_RS05390 9b0629381055ccf247ec3975015417a4 360 Gene3D G3DSA:3.40.1780.10 180 346 2.6E-94 T 22-04-2016 JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 118 758 3.2E-181 T 22-04-2016 JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 SUPERFAMILY SSF56601 470 775 3.26E-106 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 SUPERFAMILY SSF56601 264 286 3.26E-106 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 SUPERFAMILY SSF56601 315 366 3.26E-106 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 Pfam PF00905 Penicillin binding protein transpeptidase domain 475 721 5.9E-32 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 Pfam PF17092 Penicillin-binding protein OB-like domain 369 473 1.0E-21 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 PANTHER PTHR32282 469 772 3.0E-226 T 22-04-2016 JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 PANTHER PTHR32282 35 363 3.0E-226 T 22-04-2016 JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 PANTHER PTHR32282:SF5 469 772 3.0E-226 T 22-04-2016 JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 PANTHER PTHR32282:SF5 35 363 3.0E-226 T 22-04-2016 JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 Pfam PF00912 Transglycosylase 110 282 4.0E-65 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 Gene3D G3DSA:1.10.3810.10 110 284 1.3E-76 T 22-04-2016 JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 Gene3D G3DSA:3.40.710.10 285 366 2.3E-116 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 Gene3D G3DSA:3.40.710.10 470 776 2.3E-116 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 SUPERFAMILY SSF53955 95 306 3.37E-79 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS00920 82173e8c43d8969864f11500ef0f07a0 840 Gene3D G3DSA:2.40.50.140 400 469 2.4E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS17610 c02fdabf72753e0d80ea8d0ab3ad6562 277 Pfam PF00691 OmpA family 172 257 1.1E-15 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS17610 c02fdabf72753e0d80ea8d0ab3ad6562 277 Gene3D G3DSA:3.30.1330.60 153 274 1.5E-30 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS17610 c02fdabf72753e0d80ea8d0ab3ad6562 277 PANTHER PTHR30128 154 274 1.1E-22 T 22-04-2016 JE55_RS17610 c02fdabf72753e0d80ea8d0ab3ad6562 277 SUPERFAMILY SSF103088 153 274 1.16E-25 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS17610 c02fdabf72753e0d80ea8d0ab3ad6562 277 PRINTS PR01021 OMPA domain signature 198 213 1.1E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS17610 c02fdabf72753e0d80ea8d0ab3ad6562 277 PRINTS PR01021 OMPA domain signature 213 229 1.1E-8 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS17610 c02fdabf72753e0d80ea8d0ab3ad6562 277 Pfam PF04355 SmpA / OmlA family 45 106 2.5E-10 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 JE55_RS16460 daf1decfe96a29b6b264247ef0db8e78 311 SMART SM00028 124 157 0.34 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS16460 daf1decfe96a29b6b264247ef0db8e78 311 SMART SM00028 158 191 62.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS16460 daf1decfe96a29b6b264247ef0db8e78 311 Gene3D G3DSA:1.25.40.10 91 247 4.9E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS16460 daf1decfe96a29b6b264247ef0db8e78 311 PIRSF PIRSF029658 4 307 1.4E-114 T 22-04-2016 IPR016931 Uncharacterised conserved protein UCP029658, TPR JE55_RS16460 daf1decfe96a29b6b264247ef0db8e78 311 PANTHER PTHR23083 58 212 9.2E-12 T 22-04-2016 JE55_RS16460 daf1decfe96a29b6b264247ef0db8e78 311 SUPERFAMILY SSF48452 124 217 5.36E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS04395 ba661edbdf9b673321ed0a5b165aa03d 363 Gene3D G3DSA:3.40.50.720 7 223 1.4E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04395 ba661edbdf9b673321ed0a5b165aa03d 363 Gene3D G3DSA:3.90.25.10 224 361 1.3E-26 T 22-04-2016 JE55_RS04395 ba661edbdf9b673321ed0a5b165aa03d 363 SUPERFAMILY SSF51735 184 359 1.89E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04395 ba661edbdf9b673321ed0a5b165aa03d 363 SUPERFAMILY SSF51735 8 141 1.89E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04395 ba661edbdf9b673321ed0a5b165aa03d 363 PANTHER PTHR10366:SF466 13 362 2.4E-63 T 22-04-2016 JE55_RS04395 ba661edbdf9b673321ed0a5b165aa03d 363 Pfam PF01370 NAD dependent epimerase/dehydratase family 14 277 8.4E-43 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 JE55_RS04395 ba661edbdf9b673321ed0a5b165aa03d 363 PANTHER PTHR10366 13 362 2.4E-63 T 22-04-2016 JE55_RS04395 ba661edbdf9b673321ed0a5b165aa03d 363 PRINTS PR01713 Nucleotide sugar epimerase signature 282 297 2.6E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 JE55_RS04395 ba661edbdf9b673321ed0a5b165aa03d 363 PRINTS PR01713 Nucleotide sugar epimerase signature 259 274 2.6E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 JE55_RS04395 ba661edbdf9b673321ed0a5b165aa03d 363 PRINTS PR01713 Nucleotide sugar epimerase signature 321 338 2.6E-5 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 JE55_RS07165 ea432f5cf1af6b8ecba9ebb873135e88 457 Pfam PF07660 Secretin and TonB N terminus short domain 82 128 3.7E-7 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 JE55_RS07165 ea432f5cf1af6b8ecba9ebb873135e88 457 PANTHER PTHR30604 56 457 4.0E-86 T 22-04-2016 JE55_RS07165 ea432f5cf1af6b8ecba9ebb873135e88 457 SMART SM00965 82 130 1.7E-6 T 22-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 JE55_RS07165 ea432f5cf1af6b8ecba9ebb873135e88 457 PRINTS PR00811 Bacterial general secretion pathway protein D signature 442 456 8.2E-19 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS07165 ea432f5cf1af6b8ecba9ebb873135e88 457 PRINTS PR00811 Bacterial general secretion pathway protein D signature 221 231 8.2E-19 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS07165 ea432f5cf1af6b8ecba9ebb873135e88 457 PRINTS PR00811 Bacterial general secretion pathway protein D signature 296 320 8.2E-19 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS07165 ea432f5cf1af6b8ecba9ebb873135e88 457 PRINTS PR00811 Bacterial general secretion pathway protein D signature 419 437 8.2E-19 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS07165 ea432f5cf1af6b8ecba9ebb873135e88 457 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 57 454 2.1E-123 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 JE55_RS07165 ea432f5cf1af6b8ecba9ebb873135e88 457 Pfam PF00263 Bacterial type II and III secretion system protein 300 454 1.6E-44 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 JE55_RS07165 ea432f5cf1af6b8ecba9ebb873135e88 457 Pfam PF03958 Bacterial type II/III secretion system short domain 158 221 4.6E-13 T 22-04-2016 IPR005644 NolW-like JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 Gene3D G3DSA:1.10.760.10 333 426 3.3E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 Gene3D G3DSA:3.90.10.10 184 198 5.7E-4 T 22-04-2016 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 Gene3D G3DSA:3.90.10.10 34 51 5.7E-4 T 22-04-2016 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 Gene3D G3DSA:3.90.10.10 311 332 5.7E-4 T 22-04-2016 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 PANTHER PTHR35008:SF5 18 426 6.1E-178 T 22-04-2016 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 PIRSF PIRSF000018 13 430 1.1E-149 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 SUPERFAMILY SSF46626 323 426 2.54E-25 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 Gene3D G3DSA:1.10.760.10 52 145 1.2E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 Gene3D G3DSA:1.10.760.10 199 297 3.7E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 SUPERFAMILY SSF46626 36 165 2.83E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 PANTHER PTHR35008 18 426 6.1E-178 T 22-04-2016 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 Pfam PF00034 Cytochrome c 323 408 5.4E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 Pfam PF00034 Cytochrome c 46 145 1.6E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS14650 d845163df64b2f7cdbd5f22b56e6ee8a 430 SUPERFAMILY SSF46626 188 297 1.09E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 SUPERFAMILY SSF69255 379 486 9.42E-19 T 22-04-2016 JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 SUPERFAMILY SSF69279 203 379 8.16E-12 T 22-04-2016 JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 28 415 2.8E-38 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 672 820 7.6E-46 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 PANTHER PTHR32305:SF7 10 812 1.9E-30 T 22-04-2016 JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 PANTHER PTHR32305 10 812 1.9E-30 T 22-04-2016 JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 23 414 5.9E-56 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 Pfam PF05954 Phage late control gene D protein (GPD) 35 341 3.7E-63 T 22-04-2016 JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 SUPERFAMILY SSF69279 18 196 1.28E-42 T 22-04-2016 JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 Gene3D G3DSA:3.55.50.10 104 200 6.1E-19 T 22-04-2016 JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 518 623 7.7E-31 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain JE55_RS15640 4e378b600fe56fa06b7f90906eac3f4c 1111 Gene3D G3DSA:2.40.50.230 385 487 1.7E-23 T 22-04-2016 IPR006531 Gp5 N-terminal JE55_RS14945 bae81cb4df5b2f4fc78c8eaa39e21266 466 Gene3D G3DSA:3.30.70.270 307 464 3.8E-54 T 22-04-2016 JE55_RS14945 bae81cb4df5b2f4fc78c8eaa39e21266 466 PANTHER PTHR10799:SF686 192 464 3.7E-26 T 22-04-2016 JE55_RS14945 bae81cb4df5b2f4fc78c8eaa39e21266 466 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 301 465 2.2E-50 T 22-04-2016 IPR000160 GGDEF domain JE55_RS14945 bae81cb4df5b2f4fc78c8eaa39e21266 466 SUPERFAMILY SSF55073 310 464 7.85E-48 T 22-04-2016 IPR029787 Nucleotide cyclase JE55_RS14945 bae81cb4df5b2f4fc78c8eaa39e21266 466 PANTHER PTHR10799 192 464 3.7E-26 T 22-04-2016 JE55_RS14945 bae81cb4df5b2f4fc78c8eaa39e21266 466 Pfam PF00990 Diguanylate cyclase, GGDEF domain 305 462 2.7E-44 T 22-04-2016 IPR000160 GGDEF domain JE55_RS14945 bae81cb4df5b2f4fc78c8eaa39e21266 466 SMART SM00267 294 466 4.0E-54 T 22-04-2016 IPR000160 GGDEF domain JE55_RS10450 bae87c3a3f1a36c18ca403ceab208bf3 259 Gene3D G3DSA:3.30.420.40 87 257 9.6E-37 T 22-04-2016 JE55_RS10450 bae87c3a3f1a36c18ca403ceab208bf3 259 SUPERFAMILY SSF53067 4 113 4.06E-26 T 22-04-2016 JE55_RS10450 bae87c3a3f1a36c18ca403ceab208bf3 259 PANTHER PTHR34265 4 257 4.1E-32 T 22-04-2016 JE55_RS10450 bae87c3a3f1a36c18ca403ceab208bf3 259 Hamap MF_01274 Type III pantothenate kinase [coaX]. 4 259 16.263 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 JE55_RS10450 bae87c3a3f1a36c18ca403ceab208bf3 259 Pfam PF03309 Type III pantothenate kinase 5 211 2.1E-61 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 JE55_RS10450 bae87c3a3f1a36c18ca403ceab208bf3 259 SUPERFAMILY SSF53067 118 256 4.4E-27 T 22-04-2016 JE55_RS10450 bae87c3a3f1a36c18ca403ceab208bf3 259 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 6 255 2.3E-24 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 20 410 3.4E-119 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 Gene3D G3DSA:1.10.240.10 245 342 8.5E-35 T 22-04-2016 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 228 240 4.5E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 193 4.5E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 63 85 4.5E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 195 217 4.5E-26 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 Gene3D G3DSA:3.40.50.620 23 244 3.6E-80 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 Pfam PF01479 S4 domain 356 397 4.3E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 SMART SM00363 351 412 7.0E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 Pfam PF00579 tRNA synthetases class I (W and Y) 49 330 3.5E-73 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 SUPERFAMILY SSF55174 333 408 7.33E-18 T 22-04-2016 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 PANTHER PTHR11766:SF1 17 411 9.1E-219 T 22-04-2016 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 Gene3D G3DSA:3.10.290.10 343 411 2.7E-24 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 15 411 47.229 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 SUPERFAMILY SSF52374 22 329 9.39E-90 T 22-04-2016 JE55_RS05595 cfb21f54d84d6fb1dde38ec19eee8837 413 PANTHER PTHR11766 17 411 9.1E-219 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 JE55_RS03245 ee112f858ea89cf64f9c6f7115a8c758 207 Pfam PF12804 MobA-like NTP transferase domain 13 180 9.6E-35 T 22-04-2016 IPR025877 MobA-like NTP transferase JE55_RS03245 ee112f858ea89cf64f9c6f7115a8c758 207 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 9 204 27.491 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 JE55_RS03245 ee112f858ea89cf64f9c6f7115a8c758 207 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 11 202 1.6E-72 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 JE55_RS03245 ee112f858ea89cf64f9c6f7115a8c758 207 Gene3D G3DSA:3.90.550.10 11 206 9.4E-53 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS03245 ee112f858ea89cf64f9c6f7115a8c758 207 SUPERFAMILY SSF53448 10 201 2.09E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS03245 ee112f858ea89cf64f9c6f7115a8c758 207 PANTHER PTHR19136:SF81 10 206 5.5E-40 T 22-04-2016 JE55_RS03245 ee112f858ea89cf64f9c6f7115a8c758 207 PANTHER PTHR19136 10 206 5.5E-40 T 22-04-2016 JE55_RS11940 d6838d47dc8356c50332c73f3050a314 274 Gene3D G3DSA:3.40.190.10 51 131 2.9E-19 T 22-04-2016 JE55_RS11940 d6838d47dc8356c50332c73f3050a314 274 PANTHER PTHR30537 18 264 5.6E-68 T 22-04-2016 JE55_RS11940 d6838d47dc8356c50332c73f3050a314 274 Gene3D G3DSA:3.40.190.10 132 215 3.1E-13 T 22-04-2016 JE55_RS11940 d6838d47dc8356c50332c73f3050a314 274 PANTHER PTHR30537:SF18 18 264 5.6E-68 T 22-04-2016 JE55_RS11940 d6838d47dc8356c50332c73f3050a314 274 SUPERFAMILY SSF53850 49 249 6.52E-36 T 22-04-2016 JE55_RS11940 d6838d47dc8356c50332c73f3050a314 274 Pfam PF03466 LysR substrate binding domain 48 247 1.6E-33 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS29300 000753aff88f733cf95fbbec3b21504c 300 PANTHER PTHR22726 14 206 1.2E-24 T 22-04-2016 JE55_RS29300 000753aff88f733cf95fbbec3b21504c 300 Pfam PF01435 Peptidase family M48 24 111 7.9E-11 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JE55_RS29300 000753aff88f733cf95fbbec3b21504c 300 PANTHER PTHR22726:SF10 14 206 1.2E-24 T 22-04-2016 JE55_RS00380 25907b5c43e4d1885de19ef4a8e132e5 341 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 243 2.3E-45 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 JE55_RS00380 25907b5c43e4d1885de19ef4a8e132e5 341 Gene3D G3DSA:3.40.50.720 2 230 2.8E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00380 25907b5c43e4d1885de19ef4a8e132e5 341 Gene3D G3DSA:3.90.25.10 247 317 6.1E-38 T 22-04-2016 JE55_RS00380 25907b5c43e4d1885de19ef4a8e132e5 341 PANTHER PTHR10366 1 324 8.4E-106 T 22-04-2016 JE55_RS00380 25907b5c43e4d1885de19ef4a8e132e5 341 PANTHER PTHR10366:SF253 1 324 8.4E-106 T 22-04-2016 JE55_RS00380 25907b5c43e4d1885de19ef4a8e132e5 341 SUPERFAMILY SSF51735 2 329 3.28E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12285 9716e97c79c77acc8dea2c380f75df9f 296 PANTHER PTHR11609 9 292 6.3E-142 T 22-04-2016 JE55_RS12285 9716e97c79c77acc8dea2c380f75df9f 296 ProSitePatterns PS01057 SAICAR synthetase signature 1. 105 119 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 JE55_RS12285 9716e97c79c77acc8dea2c380f75df9f 296 Gene3D G3DSA:3.30.200.20 3 116 2.1E-43 T 22-04-2016 JE55_RS12285 9716e97c79c77acc8dea2c380f75df9f 296 PANTHER PTHR11609:SF6 9 292 6.3E-142 T 22-04-2016 JE55_RS12285 9716e97c79c77acc8dea2c380f75df9f 296 SUPERFAMILY SSF56104 4 294 7.52E-106 T 22-04-2016 JE55_RS12285 9716e97c79c77acc8dea2c380f75df9f 296 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 12 292 25.518 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 JE55_RS12285 9716e97c79c77acc8dea2c380f75df9f 296 Gene3D G3DSA:3.30.470.20 117 247 2.4E-54 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS12285 9716e97c79c77acc8dea2c380f75df9f 296 ProSitePatterns PS01058 SAICAR synthetase signature 2. 204 212 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 JE55_RS12285 9716e97c79c77acc8dea2c380f75df9f 296 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 15 293 2.0E-80 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 JE55_RS12285 9716e97c79c77acc8dea2c380f75df9f 296 Pfam PF01259 SAICAR synthetase 15 267 1.6E-102 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 JE55_RS14445 d021d7cea3f2aff1d1e3e2ef13e0ba14 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 1.1E-23 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 JE55_RS14445 d021d7cea3f2aff1d1e3e2ef13e0ba14 101 PANTHER PTHR11434 3 101 2.8E-40 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 JE55_RS14445 d021d7cea3f2aff1d1e3e2ef13e0ba14 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.643 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 JE55_RS09780 c42a4e45d2de8baa6702f8c4792cc282 253 PANTHER PTHR30435 1 253 4.6E-97 T 22-04-2016 JE55_RS09780 c42a4e45d2de8baa6702f8c4792cc282 253 PANTHER PTHR30435:SF18 1 253 4.6E-97 T 22-04-2016 JE55_RS09780 c42a4e45d2de8baa6702f8c4792cc282 253 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 178 249 4.7E-22 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JE55_RS09780 c42a4e45d2de8baa6702f8c4792cc282 253 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 128 6.7E-40 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G JE55_RS09780 c42a4e45d2de8baa6702f8c4792cc282 253 SUPERFAMILY SSF117143 84 211 1.83E-20 T 22-04-2016 JE55_RS09780 c42a4e45d2de8baa6702f8c4792cc282 253 Pfam PF00460 Flagella basal body rod protein 5 35 2.5E-9 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JE55_RS09780 c42a4e45d2de8baa6702f8c4792cc282 253 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site JE55_RS09780 c42a4e45d2de8baa6702f8c4792cc282 253 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 230 2.8E-54 T 22-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 JE55_RS17550 e7543765505914bfb732496d64cdc6ff 231 PANTHER PTHR30007:SF0 20 182 4.8E-14 T 22-04-2016 JE55_RS17550 e7543765505914bfb732496d64cdc6ff 231 PANTHER PTHR30007 20 182 4.8E-14 T 22-04-2016 JE55_RS17550 e7543765505914bfb732496d64cdc6ff 231 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 22 100 1.9E-20 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family JE55_RS12430 376cf83777c2b7b1689da2f67a70a780 318 PANTHER PTHR10584 4 315 3.8E-81 T 22-04-2016 JE55_RS12430 376cf83777c2b7b1689da2f67a70a780 318 Gene3D G3DSA:3.40.1190.20 2 313 3.8E-67 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS12430 376cf83777c2b7b1689da2f67a70a780 318 PANTHER PTHR10584:SF187 4 315 3.8E-81 T 22-04-2016 JE55_RS12430 376cf83777c2b7b1689da2f67a70a780 318 Pfam PF00294 pfkB family carbohydrate kinase 33 297 2.2E-42 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB JE55_RS12430 376cf83777c2b7b1689da2f67a70a780 318 SUPERFAMILY SSF53613 1 309 5.61E-65 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 PANTHER PTHR24423:SF474 10 25 7.7E-60 T 22-04-2016 JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 PANTHER PTHR24423:SF474 177 478 7.7E-60 T 22-04-2016 JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 SMART SM00388 239 304 5.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 476 7.7E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 304 3.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 PANTHER PTHR24423 10 25 7.7E-60 T 22-04-2016 JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 PANTHER PTHR24423 177 478 7.7E-60 T 22-04-2016 JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 Gene3D G3DSA:3.30.565.10 308 480 4.4E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 SUPERFAMILY SSF55874 293 482 4.85E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 SMART SM00387 355 477 8.5E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 SUPERFAMILY SSF47384 222 304 1.28E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 Pfam PF08521 Two-component sensor kinase N-terminal 22 161 6.5E-30 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 Gene3D G3DSA:1.10.287.130 232 300 1.2E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 455 1.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 429 1.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 415 1.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS08580 91a344092ca5533d38dd8412904aa845 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 474 1.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15120 5ca6824f1565f0eeb6eacec870ed76d8 161 Pfam PF13091 PLD-like domain 35 155 3.9E-8 T 22-04-2016 IPR025202 Phospholipase D-like domain JE55_RS15120 5ca6824f1565f0eeb6eacec870ed76d8 161 SUPERFAMILY SSF56024 29 159 1.54E-15 T 22-04-2016 JE55_RS15120 5ca6824f1565f0eeb6eacec870ed76d8 161 Gene3D G3DSA:3.30.870.10 34 158 1.9E-15 T 22-04-2016 JE55_RS17735 3464441688cbe854b35939f05527caa6 248 Gene3D G3DSA:3.20.20.450 3 233 8.9E-51 T 22-04-2016 IPR001633 EAL domain JE55_RS17735 3464441688cbe854b35939f05527caa6 248 PANTHER PTHR33121 1 227 4.7E-32 T 22-04-2016 JE55_RS17735 3464441688cbe854b35939f05527caa6 248 Pfam PF00563 EAL domain 1 223 1.9E-50 T 22-04-2016 IPR001633 EAL domain JE55_RS17735 3464441688cbe854b35939f05527caa6 248 SUPERFAMILY SSF141868 3 235 1.09E-45 T 22-04-2016 IPR001633 EAL domain JE55_RS17735 3464441688cbe854b35939f05527caa6 248 SMART SM00052 1 228 2.8E-17 T 22-04-2016 IPR001633 EAL domain JE55_RS17735 3464441688cbe854b35939f05527caa6 248 PANTHER PTHR33121:SF13 1 227 4.7E-32 T 22-04-2016 JE55_RS10885 c8a3bc1cd23d0fb360e772795adaee77 355 PANTHER PTHR10696:SF27 71 355 3.8E-54 T 22-04-2016 JE55_RS10885 c8a3bc1cd23d0fb360e772795adaee77 355 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 59 352 8.0E-41 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 JE55_RS10885 c8a3bc1cd23d0fb360e772795adaee77 355 PANTHER PTHR10696 71 355 3.8E-54 T 22-04-2016 JE55_RS10885 c8a3bc1cd23d0fb360e772795adaee77 355 Gene3D G3DSA:3.60.130.10 231 261 2.6E-56 T 22-04-2016 JE55_RS10885 c8a3bc1cd23d0fb360e772795adaee77 355 Gene3D G3DSA:3.60.130.10 42 191 2.6E-56 T 22-04-2016 JE55_RS10885 c8a3bc1cd23d0fb360e772795adaee77 355 Gene3D G3DSA:3.60.130.10 294 355 2.6E-56 T 22-04-2016 JE55_RS10885 c8a3bc1cd23d0fb360e772795adaee77 355 SUPERFAMILY SSF51197 33 354 1.56E-78 T 22-04-2016 JE55_RS02265 d03138a78fe1445b127343d7b30976ac 461 Gene3D G3DSA:1.20.1250.20 22 228 1.3E-13 T 22-04-2016 JE55_RS02265 d03138a78fe1445b127343d7b30976ac 461 TIGRFAM TIGR00886 2A0108: nitrite transporter 27 413 2.6E-101 T 22-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 JE55_RS02265 d03138a78fe1445b127343d7b30976ac 461 SUPERFAMILY SSF103473 9 455 8.24E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS02265 d03138a78fe1445b127343d7b30976ac 461 PANTHER PTHR23515 5 371 2.8E-189 T 22-04-2016 JE55_RS02265 d03138a78fe1445b127343d7b30976ac 461 PANTHER PTHR23515 395 459 2.8E-189 T 22-04-2016 JE55_RS02265 d03138a78fe1445b127343d7b30976ac 461 Gene3D G3DSA:1.20.1250.20 250 450 5.0E-10 T 22-04-2016 JE55_RS02265 d03138a78fe1445b127343d7b30976ac 461 PANTHER PTHR23515:SF6 5 371 2.8E-189 T 22-04-2016 JE55_RS02265 d03138a78fe1445b127343d7b30976ac 461 PANTHER PTHR23515:SF6 395 459 2.8E-189 T 22-04-2016 JE55_RS02265 d03138a78fe1445b127343d7b30976ac 461 Pfam PF07690 Major Facilitator Superfamily 37 372 1.2E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS06355 c74527f0683c101c520b6155c69c6e16 386 Pfam PF13609 Gram-negative porin 7 345 2.4E-49 T 22-04-2016 JE55_RS06355 c74527f0683c101c520b6155c69c6e16 386 SUPERFAMILY SSF56935 21 386 3.66E-90 T 22-04-2016 JE55_RS06355 c74527f0683c101c520b6155c69c6e16 386 Gene3D G3DSA:2.40.160.10 21 386 3.0E-107 T 22-04-2016 IPR023614 Porin domain JE55_RS06355 c74527f0683c101c520b6155c69c6e16 386 PRINTS PR00184 Neisseria sp. porin signature 53 78 8.0E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS06355 c74527f0683c101c520b6155c69c6e16 386 PRINTS PR00184 Neisseria sp. porin signature 319 343 8.0E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS06355 c74527f0683c101c520b6155c69c6e16 386 PRINTS PR00184 Neisseria sp. porin signature 154 171 8.0E-8 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS06355 c74527f0683c101c520b6155c69c6e16 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 155 166 1.4E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS06355 c74527f0683c101c520b6155c69c6e16 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.4E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS06355 c74527f0683c101c520b6155c69c6e16 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 1.4E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS06355 c74527f0683c101c520b6155c69c6e16 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 322 339 1.4E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS06355 c74527f0683c101c520b6155c69c6e16 386 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 183 195 1.4E-7 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS07375 652a652c618649ce9fe8deb5c2bb0bba 104 PANTHER PTHR11620 5 97 3.9E-27 T 22-04-2016 JE55_RS07375 652a652c618649ce9fe8deb5c2bb0bba 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 12 102 21.918 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 JE55_RS07375 652a652c618649ce9fe8deb5c2bb0bba 104 Pfam PF00276 Ribosomal protein L23 13 99 1.6E-30 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 JE55_RS07375 652a652c618649ce9fe8deb5c2bb0bba 104 Gene3D G3DSA:3.30.70.330 10 101 2.5E-33 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 JE55_RS07375 652a652c618649ce9fe8deb5c2bb0bba 104 SUPERFAMILY SSF54189 8 97 3.02E-30 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS17165 2d8883cf93ea6fd94b53f3ea6d329628 228 PANTHER PTHR10655:SF17 7 218 1.4E-64 T 22-04-2016 JE55_RS17165 2d8883cf93ea6fd94b53f3ea6d329628 228 SUPERFAMILY SSF53474 9 219 3.35E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17165 2d8883cf93ea6fd94b53f3ea6d329628 228 PANTHER PTHR10655 7 218 1.4E-64 T 22-04-2016 JE55_RS17165 2d8883cf93ea6fd94b53f3ea6d329628 228 Gene3D G3DSA:3.40.50.1820 12 221 1.0E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17165 2d8883cf93ea6fd94b53f3ea6d329628 228 Pfam PF02230 Phospholipase/Carboxylesterase 17 219 1.4E-45 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 JE55_RS00255 d6f8b425287fb96e77f8d3ece676c823 166 Pfam PF13411 MerR HTH family regulatory protein 11 76 1.3E-20 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS00255 d6f8b425287fb96e77f8d3ece676c823 166 Gene3D G3DSA:1.10.1660.10 10 63 1.1E-23 T 22-04-2016 JE55_RS00255 d6f8b425287fb96e77f8d3ece676c823 166 SUPERFAMILY SSF46955 10 130 1.06E-25 T 22-04-2016 IPR009061 Putative DNA-binding domain JE55_RS00255 d6f8b425287fb96e77f8d3ece676c823 166 PANTHER PTHR30204 2 159 1.7E-23 T 22-04-2016 JE55_RS00255 d6f8b425287fb96e77f8d3ece676c823 166 SMART SM00422 10 78 6.0E-25 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS00255 d6f8b425287fb96e77f8d3ece676c823 166 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 11 22 6.0E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS00255 d6f8b425287fb96e77f8d3ece676c823 166 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 45 65 6.0E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS00255 d6f8b425287fb96e77f8d3ece676c823 166 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 22 35 6.0E-6 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS00255 d6f8b425287fb96e77f8d3ece676c823 166 Gene3D G3DSA:1.10.1660.10 64 133 1.1E-8 T 22-04-2016 JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 PANTHER PTHR32089 255 523 9.8E-133 T 22-04-2016 JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 371 398 1.4E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 294 323 1.4E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 448 477 1.4E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 1.4E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 429 1.4E-59 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 PANTHER PTHR32089:SF63 255 523 9.8E-133 T 22-04-2016 JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 519 5.0E-58 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 Gene3D G3DSA:1.10.287.950 287 492 3.1E-62 T 22-04-2016 JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 SMART SM00283 273 520 8.3E-91 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 190 6.6E-15 T 22-04-2016 IPR024478 4HB MCP domain JE55_RS17340 12feeb17fbe8d509fc28c35c41955c1c 580 SUPERFAMILY SSF58104 255 521 2.75E-68 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 SUPERFAMILY SSF52317 1100 1355 3.49E-90 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 SUPERFAMILY SSF82697 4 165 3.35E-41 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 SUPERFAMILY SSF109736 169 234 3.14E-22 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 PANTHER PTHR10099 3 372 0.0 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 PANTHER PTHR10099 979 1356 0.0 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 PANTHER PTHR10099 390 953 0.0 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 4 1356 21.05 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 SMART SM01211 1104 1355 3.2E-143 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 Pfam PF02769 AIR synthase related protein, C-terminal domain 877 1031 8.0E-14 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 Pfam PF02769 AIR synthase related protein, C-terminal domain 466 623 7.8E-24 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 SUPERFAMILY SSF56042 865 1097 4.34E-54 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1104 1355 4.1E-100 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 Gene3D G3DSA:3.40.50.880 1105 1328 4.4E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 SUPERFAMILY SSF55326 657 853 6.28E-66 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 SUPERFAMILY SSF55326 235 461 1.83E-59 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 PANTHER PTHR10099:SF5 3 372 0.0 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 PANTHER PTHR10099:SF5 979 1356 0.0 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 PANTHER PTHR10099:SF5 390 953 0.0 T 22-04-2016 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 7 1355 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 Gene3D G3DSA:3.30.1330.10 225 371 7.3E-38 T 22-04-2016 IPR016188 PurM-like, N-terminal domain JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 Gene3D G3DSA:3.30.1330.10 682 847 2.2E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 Gene3D G3DSA:3.30.1330.10 403 456 7.3E-38 T 22-04-2016 IPR016188 PurM-like, N-terminal domain JE55_RS00655 cfe70c5270fd8f5928de6e7c0450e7ca 1356 SUPERFAMILY SSF56042 466 692 3.59E-50 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS06790 db9744789b5dae07c6796d7eb474ac88 204 PANTHER PTHR37625 1 183 2.5E-16 T 22-04-2016 JE55_RS06790 db9744789b5dae07c6796d7eb474ac88 204 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 17 174 1.6E-33 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN JE55_RS06790 db9744789b5dae07c6796d7eb474ac88 204 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 6 176 1.6E-42 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN JE55_RS13575 48a066078d2fff01ac4f25dee3b5ea62 585 PANTHER PTHR34597:SF2 29 585 2.2E-150 T 22-04-2016 JE55_RS13575 48a066078d2fff01ac4f25dee3b5ea62 585 Pfam PF08479 POTRA domain, ShlB-type 117 173 1.6E-15 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type JE55_RS13575 48a066078d2fff01ac4f25dee3b5ea62 585 PANTHER PTHR34597 29 585 2.2E-150 T 22-04-2016 JE55_RS13575 48a066078d2fff01ac4f25dee3b5ea62 585 Gene3D G3DSA:3.10.20.310 78 173 7.1E-27 T 22-04-2016 JE55_RS13575 48a066078d2fff01ac4f25dee3b5ea62 585 PIRSF PIRSF029745 1 585 9.6E-144 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 JE55_RS13575 48a066078d2fff01ac4f25dee3b5ea62 585 Gene3D G3DSA:2.40.160.50 203 585 1.1E-122 T 22-04-2016 JE55_RS13575 48a066078d2fff01ac4f25dee3b5ea62 585 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 192 505 1.6E-30 T 22-04-2016 IPR005565 Haemolysin activator HlyB JE55_RS11090 02d1ee8c78a87cda2fd3ca1e69f85993 88 Gene3D G3DSA:3.30.70.20 4 74 1.3E-18 T 22-04-2016 JE55_RS11090 02d1ee8c78a87cda2fd3ca1e69f85993 88 PANTHER PTHR24960 1 87 2.3E-28 T 22-04-2016 JE55_RS11090 02d1ee8c78a87cda2fd3ca1e69f85993 88 PANTHER PTHR24960:SF38 1 87 2.3E-28 T 22-04-2016 JE55_RS11090 02d1ee8c78a87cda2fd3ca1e69f85993 88 Pfam PF12838 4Fe-4S dicluster domain 9 57 2.4E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS11090 02d1ee8c78a87cda2fd3ca1e69f85993 88 SUPERFAMILY SSF54862 4 75 3.91E-19 T 22-04-2016 JE55_RS11090 02d1ee8c78a87cda2fd3ca1e69f85993 88 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS13965 20ad976e2604dd77f525b519e3b0fb72 150 PANTHER PTHR34846 38 150 1.6E-15 T 22-04-2016 JE55_RS13965 20ad976e2604dd77f525b519e3b0fb72 150 SUPERFAMILY SSF69118 12 147 3.36E-45 T 22-04-2016 IPR029032 AhpD-like JE55_RS13965 20ad976e2604dd77f525b519e3b0fb72 150 Pfam PF02627 Carboxymuconolactone decarboxylase family 23 95 5.7E-18 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS13965 20ad976e2604dd77f525b519e3b0fb72 150 Gene3D G3DSA:1.20.1290.10 8 147 1.4E-49 T 22-04-2016 IPR029032 AhpD-like JE55_RS13965 20ad976e2604dd77f525b519e3b0fb72 150 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 31 80 3.5E-15 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS13965 20ad976e2604dd77f525b519e3b0fb72 150 PANTHER PTHR34846:SF2 38 150 1.6E-15 T 22-04-2016 JE55_RS05530 572870f0cc7b43016cad5cc799d6e9d0 468 Pfam PF05195 Aminopeptidase P, N-terminal domain 14 132 1.3E-33 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 JE55_RS05530 572870f0cc7b43016cad5cc799d6e9d0 468 PANTHER PTHR10804 6 458 5.5E-131 T 22-04-2016 JE55_RS05530 572870f0cc7b43016cad5cc799d6e9d0 468 PANTHER PTHR10804:SF17 6 458 5.5E-131 T 22-04-2016 JE55_RS05530 572870f0cc7b43016cad5cc799d6e9d0 468 Gene3D G3DSA:3.40.350.10 9 189 7.7E-49 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JE55_RS05530 572870f0cc7b43016cad5cc799d6e9d0 468 SMART SM01011 9 147 5.5E-61 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 JE55_RS05530 572870f0cc7b43016cad5cc799d6e9d0 468 Gene3D G3DSA:3.90.230.10 190 458 8.9E-80 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS05530 572870f0cc7b43016cad5cc799d6e9d0 468 SUPERFAMILY SSF55920 186 459 9.55E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS05530 572870f0cc7b43016cad5cc799d6e9d0 468 SUPERFAMILY SSF53092 9 185 4.18E-49 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal JE55_RS05530 572870f0cc7b43016cad5cc799d6e9d0 468 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 363 375 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site JE55_RS05530 572870f0cc7b43016cad5cc799d6e9d0 468 Pfam PF00557 Metallopeptidase family M24 192 435 9.1E-61 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS08220 30733a12e392197e5435e30d66525fea 372 SUPERFAMILY SSF103025 4 279 7.06E-89 T 22-04-2016 JE55_RS08220 30733a12e392197e5435e30d66525fea 372 Gene3D G3DSA:3.30.70.1400 56 138 4.5E-29 T 22-04-2016 JE55_RS08220 30733a12e392197e5435e30d66525fea 372 PANTHER PTHR13847 5 364 1.6E-58 T 22-04-2016 JE55_RS08220 30733a12e392197e5435e30d66525fea 372 Gene3D G3DSA:2.40.30.110 285 368 2.8E-24 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 JE55_RS08220 30733a12e392197e5435e30d66525fea 372 SUPERFAMILY SSF101790 279 368 4.74E-21 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain JE55_RS08220 30733a12e392197e5435e30d66525fea 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 262 7.3E-86 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal JE55_RS08220 30733a12e392197e5435e30d66525fea 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 270 361 2.0E-14 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 JE55_RS08220 30733a12e392197e5435e30d66525fea 372 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 366 43.159 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 JE55_RS08220 30733a12e392197e5435e30d66525fea 372 PANTHER PTHR13847:SF5 5 364 1.6E-58 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 JE55_RS08220 30733a12e392197e5435e30d66525fea 372 Gene3D G3DSA:3.30.1360.120 148 239 1.5E-50 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 JE55_RS08220 30733a12e392197e5435e30d66525fea 372 Gene3D G3DSA:3.30.1360.120 4 55 1.5E-50 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 JE55_RS08220 30733a12e392197e5435e30d66525fea 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 366 9.4E-118 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 JE55_RS08220 30733a12e392197e5435e30d66525fea 372 PIRSF PIRSF006487 1 371 3.0E-79 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 JE55_RS05905 bfacade652d03743cdff26e1cbc25a32 275 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 7 260 5.3E-74 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS05905 bfacade652d03743cdff26e1cbc25a32 275 Gene3D G3DSA:3.20.20.70 9 271 4.1E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS05905 bfacade652d03743cdff26e1cbc25a32 275 SMART SM00934 21 260 4.8E-51 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS05905 bfacade652d03743cdff26e1cbc25a32 275 SUPERFAMILY SSF51366 7 271 3.51E-76 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 JE55_RS05905 bfacade652d03743cdff26e1cbc25a32 275 Hamap MF_01215 Orotidine 5'-phosphate decarboxylase [pyrF]. 6 273 36.188 T 22-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS05905 bfacade652d03743cdff26e1cbc25a32 275 PANTHER PTHR19278 6 230 9.9E-62 T 22-04-2016 JE55_RS05905 bfacade652d03743cdff26e1cbc25a32 275 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 94 107 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS05905 bfacade652d03743cdff26e1cbc25a32 275 PANTHER PTHR19278:SF1 6 230 9.9E-62 T 22-04-2016 JE55_RS05905 bfacade652d03743cdff26e1cbc25a32 275 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 21 251 1.3E-29 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS16885 a9d814e4a9e18529659d2174d3c44aa4 331 PANTHER PTHR35007:SF1 130 331 1.5E-47 T 22-04-2016 JE55_RS16885 a9d814e4a9e18529659d2174d3c44aa4 331 Pfam PF00482 Type II secretion system (T2SS), protein F 162 286 2.6E-18 T 22-04-2016 IPR018076 Type II secretion system F domain JE55_RS16885 a9d814e4a9e18529659d2174d3c44aa4 331 PANTHER PTHR35007 130 331 1.5E-47 T 22-04-2016 JE55_RS16430 41e1d4c2849891cf640236a8461ec222 299 SMART SM00858 47 107 5.1E-8 T 22-04-2016 IPR013974 SAF domain JE55_RS16430 41e1d4c2849891cf640236a8461ec222 299 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 109 224 1.2E-30 T 22-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain JE55_RS16430 41e1d4c2849891cf640236a8461ec222 299 Pfam PF08666 SAF domain 48 105 2.7E-5 T 22-04-2016 IPR013974 SAF domain JE55_RS16430 41e1d4c2849891cf640236a8461ec222 299 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 12 295 2.0E-62 T 22-04-2016 IPR017592 Pilus assembly, Flp-type CpaB JE55_RS17345 3f394972710bb44d8939e4b42dabf814 170 Gene3D G3DSA:2.40.50.180 62 108 4.0E-12 T 22-04-2016 JE55_RS17345 3f394972710bb44d8939e4b42dabf814 170 SUPERFAMILY SSF50341 21 164 3.01E-35 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 JE55_RS17345 3f394972710bb44d8939e4b42dabf814 170 PANTHER PTHR22617 21 166 1.2E-41 T 22-04-2016 JE55_RS17345 3f394972710bb44d8939e4b42dabf814 170 SMART SM00260 20 161 3.0E-36 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 JE55_RS17345 3f394972710bb44d8939e4b42dabf814 170 Pfam PF01584 CheW-like domain 24 163 4.4E-34 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 452 9.5E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 415 432 9.5E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 SUPERFAMILY SSF52540 151 393 1.16E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 Pfam PF00158 Sigma-54 interaction domain 151 317 4.7E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 Gene3D G3DSA:1.10.8.60 325 394 6.7E-23 T 22-04-2016 JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 SMART SM00382 171 314 5.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 SUPERFAMILY SSF46689 364 451 3.45E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 364 373 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 Gene3D G3DSA:1.10.10.60 408 452 1.3E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 Pfam PF02954 Bacterial regulatory protein, Fis family 410 449 6.7E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 Gene3D G3DSA:3.40.50.300 149 323 3.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 237 252 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS11410 aae41b72d0172a4cdf0bc1fdfc70d7a8 462 PANTHER PTHR32071 97 462 5.2E-147 T 22-04-2016 JE55_RS12405 855b6e45fe0f1b7c9c2bd7a7e71a0092 263 PANTHER PTHR30477 1 260 5.8E-42 T 22-04-2016 JE55_RS12405 855b6e45fe0f1b7c9c2bd7a7e71a0092 263 Gene3D G3DSA:1.10.3470.10 24 260 1.9E-4 T 22-04-2016 IPR029022 ABC transporter, BtuC-like JE55_RS12405 855b6e45fe0f1b7c9c2bd7a7e71a0092 263 Pfam PF00950 ABC 3 transport family 4 256 2.0E-49 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 JE55_RS12405 855b6e45fe0f1b7c9c2bd7a7e71a0092 263 SUPERFAMILY SSF81345 2 252 2.35E-32 T 22-04-2016 IPR029022 ABC transporter, BtuC-like JE55_RS12405 855b6e45fe0f1b7c9c2bd7a7e71a0092 263 PANTHER PTHR30477:SF0 1 260 5.8E-42 T 22-04-2016 JE55_RS23175 59da50745cf5995922574f4c9476513f 230 PANTHER PTHR30624 1 230 1.7E-133 T 22-04-2016 JE55_RS23175 59da50745cf5995922574f4c9476513f 230 PANTHER PTHR30624:SF4 1 230 1.7E-133 T 22-04-2016 JE55_RS23175 59da50745cf5995922574f4c9476513f 230 SUPERFAMILY SSF111283 8 230 2.09E-85 T 22-04-2016 JE55_RS23175 59da50745cf5995922574f4c9476513f 230 Pfam PF01523 Putative modulator of DNA gyrase 10 119 1.1E-37 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS01745 173e92a9452c6cd70ed929a205514d09 141 PANTHER PTHR37465 1 91 3.1E-15 T 22-04-2016 JE55_RS01745 173e92a9452c6cd70ed929a205514d09 141 Pfam PF05488 PAAR motif 9 83 3.0E-16 T 22-04-2016 IPR008727 PAAR motif JE55_RS01745 173e92a9452c6cd70ed929a205514d09 141 PANTHER PTHR37465:SF1 1 91 3.1E-15 T 22-04-2016 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 PANTHER PTHR11946:SF11 288 918 0.0 T 22-04-2016 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 PANTHER PTHR11946:SF11 240 265 0.0 T 22-04-2016 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 PANTHER PTHR11946:SF11 16 220 0.0 T 22-04-2016 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 66 77 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 Gene3D G3DSA:3.40.50.620 419 656 4.4E-129 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 Gene3D G3DSA:3.40.50.620 22 205 4.4E-129 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 SUPERFAMILY SSF52374 416 668 4.93E-126 T 22-04-2016 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 SUPERFAMILY SSF52374 16 207 4.93E-126 T 22-04-2016 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 Pfam PF08264 Anticodon-binding domain of tRNA 705 858 2.2E-25 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 SUPERFAMILY SSF50677 211 416 1.99E-47 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 Pfam PF06827 Zinc finger found in FPG and IleRS 907 932 1.8E-7 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 23 859 1.3E-259 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 Gene3D G3DSA:3.90.740.10 211 402 4.1E-49 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 35 661 5.4E-210 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 SUPERFAMILY SSF47323 672 935 2.62E-71 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 10 936 20.242 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 PANTHER PTHR11946 288 918 0.0 T 22-04-2016 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 PANTHER PTHR11946 240 265 0.0 T 22-04-2016 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 PANTHER PTHR11946 16 220 0.0 T 22-04-2016 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 Gene3D G3DSA:1.10.730.10 661 844 2.2E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 545 558 4.7E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 244 267 4.7E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 581 590 4.7E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 414 429 4.7E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 JE55_RS12870 2b403ac5424e81ef2bcadd08c7122a2c 945 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 59 70 4.7E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 Gene3D G3DSA:3.40.50.620 8 197 6.3E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 Gene3D G3DSA:3.40.50.620 345 559 6.3E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 Gene3D G3DSA:3.40.50.620 597 618 6.3E-137 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 889 953 2.9E-20 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 22 619 8.8E-204 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 SUPERFAMILY SSF52374 345 559 7.17E-134 T 22-04-2016 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 SUPERFAMILY SSF52374 4 196 7.17E-134 T 22-04-2016 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 SUPERFAMILY SSF52374 597 629 7.17E-134 T 22-04-2016 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 935 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 Pfam PF08264 Anticodon-binding domain of tRNA 674 829 6.1E-39 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PANTHER PTHR11946 885 947 0.0 T 22-04-2016 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PANTHER PTHR11946 596 652 0.0 T 22-04-2016 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PANTHER PTHR11946 669 863 0.0 T 22-04-2016 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PANTHER PTHR11946 1 558 0.0 T 22-04-2016 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 SUPERFAMILY SSF50677 195 346 3.14E-62 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PRINTS PR00986 Valyl-tRNA synthetase signature 40 51 1.5E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PRINTS PR00986 Valyl-tRNA synthetase signature 234 251 1.5E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PRINTS PR00986 Valyl-tRNA synthetase signature 463 484 1.5E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PRINTS PR00986 Valyl-tRNA synthetase signature 494 512 1.5E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PRINTS PR00986 Valyl-tRNA synthetase signature 350 363 1.5E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 Hamap MF_02004 Valine--tRNA ligase [valS]. 6 954 15.645 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 Gene3D G3DSA:1.10.287.380 884 953 1.8E-8 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 Gene3D G3DSA:1.10.730.10 619 823 3.1E-60 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 Gene3D G3DSA:3.90.740.10 198 341 1.1E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 SUPERFAMILY SSF46589 889 953 1.46E-17 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PANTHER PTHR11946:SF5 885 947 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PANTHER PTHR11946:SF5 596 652 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PANTHER PTHR11946:SF5 669 863 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 PANTHER PTHR11946:SF5 1 558 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 SUPERFAMILY SSF47323 630 904 4.3E-60 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS15985 234c1beb75c8af4312279161fcad5a8e 955 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 58 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS13955 cb0cf506714df4e64312232aef557f1f 420 Gene3D G3DSA:1.20.1250.20 14 196 6.3E-25 T 22-04-2016 JE55_RS13955 cb0cf506714df4e64312232aef557f1f 420 Gene3D G3DSA:1.20.1250.20 210 409 4.3E-26 T 22-04-2016 JE55_RS13955 cb0cf506714df4e64312232aef557f1f 420 SUPERFAMILY SSF103473 11 408 1.83E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS13955 cb0cf506714df4e64312232aef557f1f 420 PANTHER PTHR23539:SF1 1 412 1.5E-78 T 22-04-2016 JE55_RS13955 cb0cf506714df4e64312232aef557f1f 420 PANTHER PTHR23539 1 412 1.5E-78 T 22-04-2016 JE55_RS13955 cb0cf506714df4e64312232aef557f1f 420 Pfam PF07690 Major Facilitator Superfamily 20 297 2.5E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS04100 e355b49589758bcaa86e837531418ca3 427 Gene3D G3DSA:3.40.640.10 70 316 1.2E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS04100 e355b49589758bcaa86e837531418ca3 427 Pfam PF00202 Aminotransferase class-III 33 395 3.1E-75 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS04100 e355b49589758bcaa86e837531418ca3 427 SUPERFAMILY SSF53383 2 423 4.41E-128 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS04100 e355b49589758bcaa86e837531418ca3 427 Gene3D G3DSA:3.90.1150.10 319 424 5.4E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS04100 e355b49589758bcaa86e837531418ca3 427 Gene3D G3DSA:3.90.1150.10 2 69 5.4E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS04100 e355b49589758bcaa86e837531418ca3 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS04100 e355b49589758bcaa86e837531418ca3 427 PANTHER PTHR11986:SF5 1 427 9.9E-211 T 22-04-2016 JE55_RS04100 e355b49589758bcaa86e837531418ca3 427 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 423 3.1E-186 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 JE55_RS04100 e355b49589758bcaa86e837531418ca3 427 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 425 103.297 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 JE55_RS04100 e355b49589758bcaa86e837531418ca3 427 PANTHER PTHR11986 1 427 9.9E-211 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS02985 b31837fdd291c8d7b4537da7966ce8cd 912 SUPERFAMILY SSF46785 400 460 1.32E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02985 b31837fdd291c8d7b4537da7966ce8cd 912 SMART SM00843 398 463 8.6E-25 T 22-04-2016 IPR018541 FtsK gamma domain JE55_RS02985 b31837fdd291c8d7b4537da7966ce8cd 912 Pfam PF09397 Ftsk gamma domain 401 459 5.8E-23 T 22-04-2016 IPR018541 FtsK gamma domain JE55_RS02985 b31837fdd291c8d7b4537da7966ce8cd 912 PANTHER PTHR34985 568 872 3.6E-31 T 22-04-2016 JE55_RS02985 b31837fdd291c8d7b4537da7966ce8cd 912 Pfam PF05272 Virulence-associated protein E 590 782 1.5E-57 T 22-04-2016 IPR007936 Virulence-associated E JE55_RS05900 fb782e8ef892d5f654cfa1341e5ec9a5 166 PANTHER PTHR13939 9 166 2.6E-64 T 22-04-2016 JE55_RS05900 fb782e8ef892d5f654cfa1341e5ec9a5 166 SUPERFAMILY SSF142433 8 161 8.76E-57 T 22-04-2016 IPR008136 CinA, C-terminal JE55_RS05900 fb782e8ef892d5f654cfa1341e5ec9a5 166 Pfam PF02464 Competence-damaged protein 9 160 1.5E-59 T 22-04-2016 IPR008136 CinA, C-terminal JE55_RS05900 fb782e8ef892d5f654cfa1341e5ec9a5 166 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 158 1.8E-48 T 22-04-2016 IPR008136 CinA, C-terminal JE55_RS05900 fb782e8ef892d5f654cfa1341e5ec9a5 166 Gene3D G3DSA:3.90.950.20 8 163 1.3E-59 T 22-04-2016 IPR008136 CinA, C-terminal JE55_RS10065 f13ff5492c92dd9819fc74fbea3b3cab 346 PANTHER PTHR18640:SF9 3 326 2.1E-102 T 22-04-2016 JE55_RS10065 f13ff5492c92dd9819fc74fbea3b3cab 346 PIRSF PIRSF026166 1 334 2.4E-137 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter JE55_RS10065 f13ff5492c92dd9819fc74fbea3b3cab 346 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 9 318 2.3E-97 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter JE55_RS10065 f13ff5492c92dd9819fc74fbea3b3cab 346 PANTHER PTHR18640 3 326 2.1E-102 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter JE55_RS15940 712960e8f83e2660bb4ab84cc3d5856c 339 PANTHER PTHR22604:SF92 1 336 3.3E-99 T 22-04-2016 JE55_RS15940 712960e8f83e2660bb4ab84cc3d5856c 339 Gene3D G3DSA:3.30.360.10 142 334 2.3E-54 T 22-04-2016 JE55_RS15940 712960e8f83e2660bb4ab84cc3d5856c 339 SUPERFAMILY SSF55347 130 296 4.32E-29 T 22-04-2016 JE55_RS15940 712960e8f83e2660bb4ab84cc3d5856c 339 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 8 332 2.1E-124 T 22-04-2016 IPR030827 Inositol 2-dehydrogenase JE55_RS15940 712960e8f83e2660bb4ab84cc3d5856c 339 PANTHER PTHR22604 1 336 3.3E-99 T 22-04-2016 JE55_RS15940 712960e8f83e2660bb4ab84cc3d5856c 339 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 125 8.4E-20 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 JE55_RS15940 712960e8f83e2660bb4ab84cc3d5856c 339 SUPERFAMILY SSF51735 5 150 1.37E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS15940 712960e8f83e2660bb4ab84cc3d5856c 339 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 238 5.6E-5 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 JE55_RS15940 712960e8f83e2660bb4ab84cc3d5856c 339 Gene3D G3DSA:3.40.50.720 4 141 7.5E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05575 b68074c2450c260c986f6a1a6e209a29 318 PANTHER PTHR36151:SF3 19 314 1.4E-88 T 22-04-2016 JE55_RS05575 b68074c2450c260c986f6a1a6e209a29 318 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 61 292 1.2E-55 T 22-04-2016 IPR018713 Domain of unknown function DUF2236 JE55_RS05575 b68074c2450c260c986f6a1a6e209a29 318 PANTHER PTHR36151 19 314 1.4E-88 T 22-04-2016 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 Pfam PF00989 PAS fold 321 432 3.4E-17 T 22-04-2016 IPR013767 PAS fold GO:0006355 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 317 442 1.2E-26 T 22-04-2016 IPR000014 PAS domain JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 PANTHER PTHR24423 303 433 7.7E-79 T 22-04-2016 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 PANTHER PTHR24423 17 38 7.7E-79 T 22-04-2016 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 PANTHER PTHR24423 564 825 7.7E-79 T 22-04-2016 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 SUPERFAMILY SSF55785 432 563 6.28E-9 T 22-04-2016 IPR000014 PAS domain JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 SUPERFAMILY SSF55785 306 433 2.44E-26 T 22-04-2016 IPR000014 PAS domain JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 SUPERFAMILY SSF47384 581 655 7.46E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 PANTHER PTHR24423:SF505 303 433 7.7E-79 T 22-04-2016 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 PANTHER PTHR24423:SF505 17 38 7.7E-79 T 22-04-2016 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 PANTHER PTHR24423:SF505 564 825 7.7E-79 T 22-04-2016 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 SMART SM00388 587 657 5.7E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 742 756 2.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 760 770 2.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 771 789 2.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 PRINTS PR00344 Bacterial sensor protein C-terminal signature 800 813 2.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 701 813 6.5E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 SMART SM00387 699 816 1.5E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 SUPERFAMILY SSF55874 649 814 1.26E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 Pfam PF00512 His Kinase A (phospho-acceptor) domain 588 654 1.4E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 Pfam PF13188 PAS domain 447 490 0.009 T 22-04-2016 IPR000014 PAS domain JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 Gene3D G3DSA:3.30.450.20 433 563 3.8E-9 T 22-04-2016 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 Gene3D G3DSA:3.30.450.20 306 432 8.2E-25 T 22-04-2016 JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 SMART SM00086 393 435 1.3E-7 T 22-04-2016 IPR001610 PAC motif JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 SMART SM00091 318 386 2.1E-7 T 22-04-2016 IPR000014 PAS domain JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 SMART SM00091 447 517 59.0 T 22-04-2016 IPR000014 PAS domain JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 Gene3D G3DSA:3.30.565.10 657 814 2.4E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02230 2fbf3df72b7d7cb2c6d9c40f21dd8c2b 836 Gene3D G3DSA:1.10.287.130 588 651 3.9E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS05415 491c04aed89543016f9d925d6e49f59f 208 PANTHER PTHR23508:SF14 30 206 1.0E-33 T 22-04-2016 JE55_RS05415 491c04aed89543016f9d925d6e49f59f 208 Pfam PF07690 Major Facilitator Superfamily 26 200 5.2E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS05415 491c04aed89543016f9d925d6e49f59f 208 Gene3D G3DSA:1.20.1250.20 26 201 8.1E-18 T 22-04-2016 JE55_RS05415 491c04aed89543016f9d925d6e49f59f 208 SUPERFAMILY SSF103473 26 204 1.83E-21 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS05415 491c04aed89543016f9d925d6e49f59f 208 PANTHER PTHR23508 30 206 1.0E-33 T 22-04-2016 JE55_RS16100 f42a987847fcec0cf105a6fc5c1be05a 557 SUPERFAMILY SSF51905 13 220 2.16E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS16100 f42a987847fcec0cf105a6fc5c1be05a 557 SUPERFAMILY SSF51905 316 455 2.16E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS16100 f42a987847fcec0cf105a6fc5c1be05a 557 PANTHER PTHR10617 12 480 1.2E-264 T 22-04-2016 JE55_RS16100 f42a987847fcec0cf105a6fc5c1be05a 557 Pfam PF13450 NAD(P)-binding Rossmann-like domain 22 67 1.0E-6 T 22-04-2016 JE55_RS16100 f42a987847fcec0cf105a6fc5c1be05a 557 Gene3D G3DSA:3.50.50.60 16 291 3.3E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS16100 f42a987847fcec0cf105a6fc5c1be05a 557 PANTHER PTHR10617:SF107 12 480 1.2E-264 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 JE55_RS16100 f42a987847fcec0cf105a6fc5c1be05a 557 SUPERFAMILY SSF54862 457 557 3.14E-29 T 22-04-2016 JE55_RS16100 f42a987847fcec0cf105a6fc5c1be05a 557 SUPERFAMILY SSF54373 221 315 1.22E-38 T 22-04-2016 JE55_RS16100 f42a987847fcec0cf105a6fc5c1be05a 557 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 453 554 6.0E-50 T 22-04-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 JE55_RS16100 f42a987847fcec0cf105a6fc5c1be05a 557 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 19 41 6.4E-7 T 22-04-2016 JE55_RS16100 f42a987847fcec0cf105a6fc5c1be05a 557 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 188 203 6.4E-7 T 22-04-2016 JE55_RS03655 ca180a556cebc4c66961d7175f838bb1 368 PANTHER PTHR38431 124 351 6.9E-33 T 22-04-2016 JE55_RS03655 ca180a556cebc4c66961d7175f838bb1 368 Pfam PF12727 PBP superfamily domain 145 313 2.1E-48 T 22-04-2016 IPR024370 PBP domain JE55_RS03655 ca180a556cebc4c66961d7175f838bb1 368 Gene3D G3DSA:3.40.190.10 203 304 1.4E-11 T 22-04-2016 JE55_RS03655 ca180a556cebc4c66961d7175f838bb1 368 SUPERFAMILY SSF53850 125 301 1.02E-11 T 22-04-2016 JE55_RS03655 ca180a556cebc4c66961d7175f838bb1 368 SUPERFAMILY SSF46785 18 139 2.72E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03655 ca180a556cebc4c66961d7175f838bb1 368 Gene3D G3DSA:1.10.10.10 1 128 1.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03655 ca180a556cebc4c66961d7175f838bb1 368 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 28 83 2.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 SUPERFAMILY SSF56235 17 557 1.41E-173 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 PANTHER PTHR11686:SF8 20 557 1.7E-227 T 22-04-2016 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 245 261 3.4E-44 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 54 79 3.4E-44 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 451 468 3.4E-44 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 368 386 3.4E-44 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 410 3.4E-44 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 3.4E-44 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 423 438 3.4E-44 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 274 293 3.4E-44 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 3.4E-44 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 PANTHER PTHR11686 20 557 1.7E-227 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS11845 357bd27b2092f39e80b707e9a98cd119 557 Pfam PF01019 Gamma-glutamyltranspeptidase 47 552 2.7E-154 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS17105 878083622166a165d423187b79b8e387 279 Pfam PF00551 Formyl transferase 123 251 9.7E-7 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS17105 878083622166a165d423187b79b8e387 279 PANTHER PTHR10520 217 251 5.3E-13 T 22-04-2016 JE55_RS17105 878083622166a165d423187b79b8e387 279 PANTHER PTHR10520 126 187 5.3E-13 T 22-04-2016 JE55_RS17105 878083622166a165d423187b79b8e387 279 Gene3D G3DSA:3.40.50.170 121 252 3.7E-21 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS17105 878083622166a165d423187b79b8e387 279 SUPERFAMILY SSF53328 113 271 7.73E-17 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS03880 77bfd3fd98887b4d313148c0a6419e4b 243 Gene3D G3DSA:3.30.230.70 10 241 1.2E-30 T 22-04-2016 IPR027408 PNPase/RNase PH domain JE55_RS03880 77bfd3fd98887b4d313148c0a6419e4b 243 Pfam PF01138 3' exoribonuclease family, domain 1 15 145 9.3E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 JE55_RS03880 77bfd3fd98887b4d313148c0a6419e4b 243 Hamap MF_00564 Ribonuclease PH [rph]. 6 242 49.261 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 JE55_RS03880 77bfd3fd98887b4d313148c0a6419e4b 243 PANTHER PTHR11953:SF0 1 242 3.6E-78 T 22-04-2016 JE55_RS03880 77bfd3fd98887b4d313148c0a6419e4b 243 SUPERFAMILY SSF54211 3 186 1.87E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS03880 77bfd3fd98887b4d313148c0a6419e4b 243 ProSitePatterns PS01277 Ribonuclease PH signature. 121 133 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site JE55_RS03880 77bfd3fd98887b4d313148c0a6419e4b 243 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 7 241 2.8E-117 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 JE55_RS03880 77bfd3fd98887b4d313148c0a6419e4b 243 Pfam PF03725 3' exoribonuclease family, domain 2 163 228 3.4E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 JE55_RS03880 77bfd3fd98887b4d313148c0a6419e4b 243 SUPERFAMILY SSF55666 157 242 1.7E-26 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 JE55_RS03880 77bfd3fd98887b4d313148c0a6419e4b 243 PANTHER PTHR11953 1 242 3.6E-78 T 22-04-2016 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 SUPERFAMILY SSF53822 61 331 1.36E-85 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.8E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 Gene3D G3DSA:3.40.50.2300 54 171 1.2E-49 T 22-04-2016 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 Gene3D G3DSA:3.40.50.2300 172 308 2.3E-49 T 22-04-2016 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 Gene3D G3DSA:1.10.260.40 2 53 2.2E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 PANTHER PTHR30146 1 330 4.1E-131 T 22-04-2016 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 PANTHER PTHR30146:SF30 1 330 4.1E-131 T 22-04-2016 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 SUPERFAMILY SSF47413 1 59 2.55E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 SMART SM00354 1 71 1.0E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.1E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.1E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS16795 0f0c17fb9a19885bb7cdaa168097a58c 343 Pfam PF13377 Periplasmic binding protein-like domain 168 330 4.8E-39 T 22-04-2016 JE55_RS09360 e1bc12f3bd5abad7000dd8272e4585b2 437 PANTHER PTHR12778 28 422 5.5E-83 T 22-04-2016 JE55_RS09360 e1bc12f3bd5abad7000dd8272e4585b2 437 Pfam PF07690 Major Facilitator Superfamily 33 387 5.9E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS09360 e1bc12f3bd5abad7000dd8272e4585b2 437 Gene3D G3DSA:1.20.1250.20 245 428 1.1E-16 T 22-04-2016 JE55_RS09360 e1bc12f3bd5abad7000dd8272e4585b2 437 Gene3D G3DSA:1.20.1250.20 27 216 1.5E-13 T 22-04-2016 JE55_RS09360 e1bc12f3bd5abad7000dd8272e4585b2 437 SUPERFAMILY SSF103473 9 425 1.7E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS16215 cfda23246593aa43033b488027facf9a 134 SUPERFAMILY SSF47729 36 126 9.86E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 JE55_RS16215 cfda23246593aa43033b488027facf9a 134 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 34 130 30.105 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 JE55_RS16215 cfda23246593aa43033b488027facf9a 134 Pfam PF00216 Bacterial DNA-binding protein 36 124 5.3E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS16215 cfda23246593aa43033b488027facf9a 134 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 35 127 4.2E-44 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 JE55_RS16215 cfda23246593aa43033b488027facf9a 134 SMART SM00411 36 125 8.2E-42 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS16215 cfda23246593aa43033b488027facf9a 134 PANTHER PTHR33175:SF2 36 131 4.0E-50 T 22-04-2016 JE55_RS16215 cfda23246593aa43033b488027facf9a 134 PRINTS PR01727 Prokaryotic integration host factor signature 93 106 3.1E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS16215 cfda23246593aa43033b488027facf9a 134 PRINTS PR01727 Prokaryotic integration host factor signature 109 123 3.1E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS16215 cfda23246593aa43033b488027facf9a 134 PRINTS PR01727 Prokaryotic integration host factor signature 75 90 3.1E-13 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 JE55_RS16215 cfda23246593aa43033b488027facf9a 134 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 81 100 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 JE55_RS16215 cfda23246593aa43033b488027facf9a 134 PANTHER PTHR33175 36 131 4.0E-50 T 22-04-2016 JE55_RS16215 cfda23246593aa43033b488027facf9a 134 Gene3D G3DSA:4.10.520.10 35 126 9.7E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 JE55_RS10515 18878303729189adbb776fd98848182b 102 PANTHER PTHR38036:SF1 12 102 1.8E-21 T 22-04-2016 JE55_RS10515 18878303729189adbb776fd98848182b 102 Gene3D G3DSA:3.30.70.1460 16 102 5.3E-33 T 22-04-2016 IPR027471 YbeD-like domain JE55_RS10515 18878303729189adbb776fd98848182b 102 ProDom PD061650 JHP0447 HP0495 CJ0253 23 102 0.001 T 22-04-2016 JE55_RS10515 18878303729189adbb776fd98848182b 102 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 14 102 22.807 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 JE55_RS10515 18878303729189adbb776fd98848182b 102 SUPERFAMILY SSF117991 16 102 2.88E-27 T 22-04-2016 IPR027471 YbeD-like domain JE55_RS10515 18878303729189adbb776fd98848182b 102 PANTHER PTHR38036 12 102 1.8E-21 T 22-04-2016 JE55_RS10515 18878303729189adbb776fd98848182b 102 Pfam PF04359 Protein of unknown function (DUF493) 19 102 5.4E-31 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 JE55_RS07975 8dc1759dddb3d453a55ac650c7f7813f 183 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 183 47.934 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 JE55_RS07975 8dc1759dddb3d453a55ac650c7f7813f 183 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 1.2E-88 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 JE55_RS07975 8dc1759dddb3d453a55ac650c7f7813f 183 PIRSF PIRSF003159 1 181 1.1E-94 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 JE55_RS07975 8dc1759dddb3d453a55ac650c7f7813f 183 SUPERFAMILY SSF160930 6 160 1.96E-68 T 22-04-2016 JE55_RS07975 8dc1759dddb3d453a55ac650c7f7813f 183 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 171 2.0E-99 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 JE55_RS12050 4abfc8fa91a143a3632458536b0930c6 563 SUPERFAMILY SSF51905 37 319 7.08E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS12050 4abfc8fa91a143a3632458536b0930c6 563 SUPERFAMILY SSF51905 488 547 7.08E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS12050 4abfc8fa91a143a3632458536b0930c6 563 Pfam PF05199 GMC oxidoreductase 423 539 2.3E-29 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 JE55_RS12050 4abfc8fa91a143a3632458536b0930c6 563 Pfam PF00732 GMC oxidoreductase 111 335 4.5E-17 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 JE55_RS12050 4abfc8fa91a143a3632458536b0930c6 563 SUPERFAMILY SSF54373 350 481 1.57E-15 T 22-04-2016 JE55_RS12050 4abfc8fa91a143a3632458536b0930c6 563 Gene3D G3DSA:3.50.50.60 38 163 2.5E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS12050 4abfc8fa91a143a3632458536b0930c6 563 Gene3D G3DSA:3.50.50.60 432 445 2.5E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS12050 4abfc8fa91a143a3632458536b0930c6 563 Gene3D G3DSA:3.50.50.60 479 545 2.5E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS12050 4abfc8fa91a143a3632458536b0930c6 563 Gene3D G3DSA:3.50.50.60 231 337 2.5E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS12050 4abfc8fa91a143a3632458536b0930c6 563 PANTHER PTHR11552 17 552 4.7E-123 T 22-04-2016 JE55_RS12050 4abfc8fa91a143a3632458536b0930c6 563 PANTHER PTHR11552:SF139 17 552 4.7E-123 T 22-04-2016 JE55_RS05035 951c778f25aae3604883c375cda89393 280 Gene3D G3DSA:3.40.50.720 1 228 2.2E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05035 951c778f25aae3604883c375cda89393 280 Pfam PF04321 RmlD substrate binding domain 1 229 1.0E-19 T 22-04-2016 IPR029903 RmlD-like substrate binding domain JE55_RS05035 951c778f25aae3604883c375cda89393 280 PANTHER PTHR10491 1 274 1.4E-24 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family JE55_RS05035 951c778f25aae3604883c375cda89393 280 SUPERFAMILY SSF51735 1 275 3.55E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 Gene3D G3DSA:2.40.50.250 484 578 7.5E-42 T 22-04-2016 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 PANTHER PTHR23115:SF14 5 603 2.4E-284 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 139 1.3E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 Gene3D G3DSA:2.40.30.10 205 304 3.8E-26 T 22-04-2016 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 600 1.6E-291 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 SUPERFAMILY SSF54980 399 514 1.53E-28 T 22-04-2016 IPR009022 Elongation factor G, III-V domain JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 Pfam PF00009 Elongation factor Tu GTP binding domain 5 195 3.3E-55 T 22-04-2016 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 Pfam PF03144 Elongation factor Tu domain 2 219 290 1.3E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 SUPERFAMILY SSF50447 151 301 6.85E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 SUPERFAMILY SSF52540 4 206 3.2E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 SUPERFAMILY SSF54980 303 388 2.64E-12 T 22-04-2016 IPR009022 Elongation factor G, III-V domain JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 Gene3D G3DSA:3.40.50.300 4 204 3.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 Pfam PF00679 Elongation factor G C-terminus 398 478 9.1E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 PANTHER PTHR23115 5 603 2.4E-284 T 22-04-2016 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 Gene3D G3DSA:3.30.70.870 305 400 5.7E-38 T 22-04-2016 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 PRINTS PR00315 GTP-binding elongation factor signature 123 132 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 PRINTS PR00315 GTP-binding elongation factor signature 7 20 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 PRINTS PR00315 GTP-binding elongation factor signature 87 98 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 PRINTS PR00315 GTP-binding elongation factor signature 71 81 2.4E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS16350 e9ad17419aad6f8afc9541efb3280c5d 608 Gene3D G3DSA:3.30.70.240 401 479 3.0E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain JE55_RS10855 d724337005705cf48b2e04902a835f5c 397 PANTHER PTHR23501 5 379 3.8E-104 T 22-04-2016 JE55_RS10855 d724337005705cf48b2e04902a835f5c 397 Pfam PF07690 Major Facilitator Superfamily 10 343 3.0E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS10855 d724337005705cf48b2e04902a835f5c 397 PANTHER PTHR23501:SF80 5 379 3.8E-104 T 22-04-2016 JE55_RS10855 d724337005705cf48b2e04902a835f5c 397 Gene3D G3DSA:1.20.1250.20 202 380 5.5E-9 T 22-04-2016 JE55_RS10855 d724337005705cf48b2e04902a835f5c 397 Gene3D G3DSA:1.20.1250.20 8 188 2.1E-19 T 22-04-2016 JE55_RS10855 d724337005705cf48b2e04902a835f5c 397 SUPERFAMILY SSF103473 7 379 1.02E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 PRINTS PR01798 Succinyl-CoA synthase signature 213 226 4.2E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 PRINTS PR01798 Succinyl-CoA synthase signature 245 262 4.2E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 PRINTS PR01798 Succinyl-CoA synthase signature 85 102 4.2E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 PRINTS PR01798 Succinyl-CoA synthase signature 182 200 4.2E-33 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 SUPERFAMILY SSF51735 1 127 3.72E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 SMART SM00881 4 103 1.3E-29 T 22-04-2016 IPR003781 CoA-binding GO:0048037 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 292 5.1E-127 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 Gene3D G3DSA:3.40.50.261 125 292 1.2E-71 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 SUPERFAMILY SSF52210 128 291 9.42E-53 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 Pfam PF02629 CoA binding domain 6 102 1.6E-23 T 22-04-2016 IPR003781 CoA-binding GO:0048037 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 157 186 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 241 254 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 Pfam PF00549 CoA-ligase 156 271 1.6E-15 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 Gene3D G3DSA:3.40.50.720 2 124 6.1E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 PANTHER PTHR11117 1 293 1.5E-161 T 22-04-2016 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 PIRSF PIRSF001553 1 293 1.6E-116 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 JE55_RS12185 6743f2943bb332a85487b335e9be0028 293 PANTHER PTHR11117:SF2 1 293 1.5E-161 T 22-04-2016 JE55_RS03935 d96c55c47e13d079a3b0ce2f6ce7c29b 553 PRINTS PR00762 Chloride channel signature 114 133 2.1E-26 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS03935 d96c55c47e13d079a3b0ce2f6ce7c29b 553 PRINTS PR00762 Chloride channel signature 80 97 2.1E-26 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS03935 d96c55c47e13d079a3b0ce2f6ce7c29b 553 PRINTS PR00762 Chloride channel signature 166 185 2.1E-26 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS03935 d96c55c47e13d079a3b0ce2f6ce7c29b 553 PRINTS PR00762 Chloride channel signature 334 354 2.1E-26 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS03935 d96c55c47e13d079a3b0ce2f6ce7c29b 553 PRINTS PR00762 Chloride channel signature 381 400 2.1E-26 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS03935 d96c55c47e13d079a3b0ce2f6ce7c29b 553 SUPERFAMILY SSF81340 10 433 6.54E-89 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 JE55_RS03935 d96c55c47e13d079a3b0ce2f6ce7c29b 553 PANTHER PTHR11689:SF14 29 426 5.5E-41 T 22-04-2016 JE55_RS03935 d96c55c47e13d079a3b0ce2f6ce7c29b 553 Pfam PF00654 Voltage gated chloride channel 67 413 5.2E-75 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 JE55_RS03935 d96c55c47e13d079a3b0ce2f6ce7c29b 553 Gene3D G3DSA:1.10.3080.10 12 435 4.5E-73 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 JE55_RS03935 d96c55c47e13d079a3b0ce2f6ce7c29b 553 PANTHER PTHR11689 29 426 5.5E-41 T 22-04-2016 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 Gene3D G3DSA:1.25.40.10 896 1108 1.5E-42 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 Gene3D G3DSA:1.25.40.10 235 448 3.0E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SUPERFAMILY SSF48452 271 453 1.67E-25 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 Pfam PF14559 Tetratricopeptide repeat 881 940 9.0E-6 T 22-04-2016 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 Gene3D G3DSA:3.40.50.2000 1283 1411 2.7E-13 T 22-04-2016 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 Gene3D G3DSA:3.40.50.2000 661 708 2.2E-7 T 22-04-2016 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SUPERFAMILY SSF48452 781 1098 2.66E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SUPERFAMILY SSF53335 52 132 5.63E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 Gene3D G3DSA:3.40.50.150 54 131 1.0E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 Pfam PF08241 Methyltransferase domain 44 104 4.8E-9 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 1360 1398 3.8E-6 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 PANTHER PTHR23083 862 1096 9.6E-58 T 22-04-2016 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 PANTHER PTHR23083 235 392 9.6E-58 T 22-04-2016 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SMART SM00028 364 398 250.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SMART SM00028 900 933 8.1 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SMART SM00028 801 834 1.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SMART SM00028 1002 1035 2.4E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SMART SM00028 934 967 0.13 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SMART SM00028 296 329 7.0E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SMART SM00028 1036 1069 0.51 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SMART SM00028 330 363 0.016 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 Gene3D G3DSA:1.25.40.10 801 895 5.3E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SUPERFAMILY SSF53756 480 704 9.42E-13 T 22-04-2016 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 Pfam PF13432 Tetratricopeptide repeat 1015 1065 3.5E-6 T 22-04-2016 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 Pfam PF13432 Tetratricopeptide repeat 308 361 1.1E-8 T 22-04-2016 JE55_RS17575 f3957d39a5a54b43b1eeba88e81239fb 1451 SUPERFAMILY SSF53756 1187 1426 5.96E-29 T 22-04-2016 JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 SUPERFAMILY SSF103473 13 338 4.62E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 SUPERFAMILY SSF103473 453 545 4.62E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 Gene3D G3DSA:1.20.1250.20 18 220 4.3E-20 T 22-04-2016 JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 Gene3D G3DSA:1.20.1250.20 249 337 2.4E-24 T 22-04-2016 JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 Gene3D G3DSA:1.20.1250.20 449 544 2.4E-24 T 22-04-2016 JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 PANTHER PTHR23508:SF7 451 548 1.2E-222 T 22-04-2016 JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 PANTHER PTHR23508:SF7 13 339 1.2E-222 T 22-04-2016 JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 PANTHER PTHR23508 451 548 1.2E-222 T 22-04-2016 JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 PANTHER PTHR23508 13 339 1.2E-222 T 22-04-2016 JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 Pfam PF00083 Sugar (and other) transporter 454 549 1.2E-6 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JE55_RS12150 1a5ffd147fe5905bc1047d43162ae377 552 Pfam PF00083 Sugar (and other) transporter 22 236 8.2E-28 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JE55_RS10250 9547556264d1690662b74e3a525c109f 555 PANTHER PTHR10110:SF120 1 547 4.7E-165 T 22-04-2016 JE55_RS10250 9547556264d1690662b74e3a525c109f 555 PANTHER PTHR10110 1 547 4.7E-165 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 JE55_RS10250 9547556264d1690662b74e3a525c109f 555 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 547 2.8E-136 T 22-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 JE55_RS10250 9547556264d1690662b74e3a525c109f 555 Pfam PF00999 Sodium/hydrogen exchanger family 9 421 3.1E-64 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JE55_RS02565 dde0cf67c3b1db7eabaf047a12c7a2b7 483 SMART SM00729 78 299 1.4E-47 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 JE55_RS02565 dde0cf67c3b1db7eabaf047a12c7a2b7 483 Pfam PF06969 HemN C-terminal domain 390 458 3.0E-14 T 22-04-2016 IPR010723 HemN, C-terminal JE55_RS02565 dde0cf67c3b1db7eabaf047a12c7a2b7 483 SUPERFAMILY SSF102114 31 471 3.92E-133 T 22-04-2016 JE55_RS02565 dde0cf67c3b1db7eabaf047a12c7a2b7 483 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 29 483 6.1E-176 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 JE55_RS02565 dde0cf67c3b1db7eabaf047a12c7a2b7 483 PANTHER PTHR13932:SF6 21 478 3.7E-208 T 22-04-2016 JE55_RS02565 dde0cf67c3b1db7eabaf047a12c7a2b7 483 Gene3D G3DSA:3.80.30.20 78 274 1.5E-26 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS02565 dde0cf67c3b1db7eabaf047a12c7a2b7 483 Pfam PF04055 Radical SAM superfamily 84 255 3.9E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS02565 dde0cf67c3b1db7eabaf047a12c7a2b7 483 PANTHER PTHR13932 21 478 3.7E-208 T 22-04-2016 JE55_RS02565 dde0cf67c3b1db7eabaf047a12c7a2b7 483 PIRSF PIRSF000167 28 482 5.8E-165 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 JE55_RS13885 d8846c4799cddd1b18388703b80918ca 482 SMART SM00487 30 235 7.4E-64 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain JE55_RS13885 d8846c4799cddd1b18388703b80918ca 482 SUPERFAMILY SSF52540 87 373 7.11E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13885 d8846c4799cddd1b18388703b80918ca 482 Gene3D G3DSA:3.40.50.300 7 225 4.5E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13885 d8846c4799cddd1b18388703b80918ca 482 SMART SM00490 271 352 1.5E-31 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS13885 d8846c4799cddd1b18388703b80918ca 482 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 166 174 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JE55_RS13885 d8846c4799cddd1b18388703b80918ca 482 Gene3D G3DSA:3.40.50.300 226 386 1.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13885 d8846c4799cddd1b18388703b80918ca 482 Pfam PF00270 DEAD/DEAH box helicase 35 209 1.1E-52 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JE55_RS13885 d8846c4799cddd1b18388703b80918ca 482 PANTHER PTHR24031 12 422 1.1E-178 T 22-04-2016 JE55_RS13885 d8846c4799cddd1b18388703b80918ca 482 PANTHER PTHR24031:SF0 12 422 1.1E-178 T 22-04-2016 JE55_RS13885 d8846c4799cddd1b18388703b80918ca 482 Pfam PF00271 Helicase conserved C-terminal domain 244 352 2.2E-27 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 SUPERFAMILY SSF51735 234 393 1.88E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 Gene3D G3DSA:3.40.50.1480 185 272 7.9E-121 T 22-04-2016 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 Gene3D G3DSA:3.40.50.1480 10 149 7.9E-121 T 22-04-2016 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 Gene3D G3DSA:3.40.50.720 273 372 1.2E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 SUPERFAMILY SSF52283 394 473 1.19E-111 T 22-04-2016 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 SUPERFAMILY SSF52283 186 233 1.19E-111 T 22-04-2016 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 SUPERFAMILY SSF52283 11 150 1.19E-111 T 22-04-2016 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 14 465 2.3E-183 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 9 465 48.306 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 PANTHER PTHR23420 1 148 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 PANTHER PTHR23420 184 473 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 PIRSF PIRSF001109 1 473 2.1E-188 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 85 99 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 256 272 - T 22-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 234 393 1.6E-82 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 Gene3D G3DSA:3.40.50.1480 394 473 1.2E-35 T 22-04-2016 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 SMART SM00996 13 472 0.0 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 SMART SM00997 234 393 9.4E-114 T 22-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 JE55_RS07875 1ad5a6519a576967bc3ad0132188bde5 473 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 13 472 1.4E-142 T 22-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 JE55_RS00645 d47ab670c34e0165ce5ba94ce4836cf4 259 SUPERFAMILY SSF109998 25 159 1.16E-17 T 22-04-2016 IPR027304 Trigger factor/SurA domain JE55_RS00645 d47ab670c34e0165ce5ba94ce4836cf4 259 Pfam PF13616 PPIC-type PPIASE domain 139 221 1.6E-24 T 22-04-2016 JE55_RS00645 d47ab670c34e0165ce5ba94ce4836cf4 259 PANTHER PTHR10657:SF11 37 55 2.7E-36 T 22-04-2016 JE55_RS00645 d47ab670c34e0165ce5ba94ce4836cf4 259 PANTHER PTHR10657:SF11 105 259 2.7E-36 T 22-04-2016 JE55_RS00645 d47ab670c34e0165ce5ba94ce4836cf4 259 SUPERFAMILY SSF54534 124 220 4.84E-31 T 22-04-2016 JE55_RS00645 d47ab670c34e0165ce5ba94ce4836cf4 259 PANTHER PTHR10657 37 55 2.7E-36 T 22-04-2016 JE55_RS00645 d47ab670c34e0165ce5ba94ce4836cf4 259 PANTHER PTHR10657 105 259 2.7E-36 T 22-04-2016 JE55_RS00645 d47ab670c34e0165ce5ba94ce4836cf4 259 Gene3D G3DSA:3.10.50.40 127 245 3.3E-44 T 22-04-2016 JE55_RS16875 3f7745a8d30540a21d14013dd9d4c2b0 408 PANTHER PTHR13696:SF52 91 307 2.2E-18 T 22-04-2016 JE55_RS16875 3f7745a8d30540a21d14013dd9d4c2b0 408 Pfam PF13614 AAA domain 151 311 3.4E-9 T 22-04-2016 IPR025669 AAA domain JE55_RS16875 3f7745a8d30540a21d14013dd9d4c2b0 408 Gene3D G3DSA:3.40.50.300 150 368 1.6E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16875 3f7745a8d30540a21d14013dd9d4c2b0 408 Gene3D G3DSA:3.40.50.2300 36 141 6.8E-6 T 22-04-2016 JE55_RS16875 3f7745a8d30540a21d14013dd9d4c2b0 408 PANTHER PTHR13696 91 307 2.2E-18 T 22-04-2016 JE55_RS16875 3f7745a8d30540a21d14013dd9d4c2b0 408 SUPERFAMILY SSF52172 38 142 4.41E-8 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS16875 3f7745a8d30540a21d14013dd9d4c2b0 408 SUPERFAMILY SSF52540 151 387 5.08E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04930 8f846bddee08d5d2fb0fecd694f5395a 746 PANTHER PTHR32309:SF14 207 742 9.7E-113 T 22-04-2016 JE55_RS04930 8f846bddee08d5d2fb0fecd694f5395a 746 PANTHER PTHR32309:SF14 1 126 9.7E-113 T 22-04-2016 JE55_RS04930 8f846bddee08d5d2fb0fecd694f5395a 746 Pfam PF13807 G-rich domain on putative tyrosine kinase 390 470 1.6E-28 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain JE55_RS04930 8f846bddee08d5d2fb0fecd694f5395a 746 TIGRFAM TIGR01005 eps_transp_fam: exopolysaccharide transport protein family 15 741 7.5E-166 T 22-04-2016 IPR005700 Exopolysaccharide transport protein GO:0006859|GO:0015542 JE55_RS04930 8f846bddee08d5d2fb0fecd694f5395a 746 SUPERFAMILY SSF52540 545 726 4.81E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04930 8f846bddee08d5d2fb0fecd694f5395a 746 PANTHER PTHR32309 207 742 9.7E-113 T 22-04-2016 JE55_RS04930 8f846bddee08d5d2fb0fecd694f5395a 746 PANTHER PTHR32309 1 126 9.7E-113 T 22-04-2016 JE55_RS04930 8f846bddee08d5d2fb0fecd694f5395a 746 Pfam PF02706 Chain length determinant protein 18 271 1.5E-32 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 JE55_RS04930 8f846bddee08d5d2fb0fecd694f5395a 746 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 548 719 7.0E-12 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS04930 8f846bddee08d5d2fb0fecd694f5395a 746 Gene3D G3DSA:3.40.50.300 541 724 7.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04930 8f846bddee08d5d2fb0fecd694f5395a 746 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 527 731 1.2E-41 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 JE55_RS19770 e05794db85d6a9af1b3838c04a4e155d 76 Pfam PF00668 Condensation domain 1 73 1.7E-5 T 22-04-2016 IPR001242 Condensation domain JE55_RS19770 e05794db85d6a9af1b3838c04a4e155d 76 SUPERFAMILY SSF52777 1 74 2.11E-8 T 22-04-2016 JE55_RS09155 8162ffa743ea08884b3cd21f73ff0652 363 PIRSF PIRSF018494 14 363 7.6E-165 T 22-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria JE55_RS09155 8162ffa743ea08884b3cd21f73ff0652 363 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 69 347 3.6E-76 T 22-04-2016 IPR006430 Phage portal protein PBSX family JE55_RS09155 8162ffa743ea08884b3cd21f73ff0652 363 Pfam PF04860 Phage portal protein 105 344 9.3E-12 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein JE55_RS02180 58524dc211fd3a8962b6780968350a09 159 PANTHER PTHR11717:SF7 2 156 5.2E-64 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS02180 58524dc211fd3a8962b6780968350a09 159 PANTHER PTHR11717 2 156 5.2E-64 T 22-04-2016 JE55_RS02180 58524dc211fd3a8962b6780968350a09 159 Gene3D G3DSA:3.40.50.270 2 154 4.0E-57 T 22-04-2016 JE55_RS02180 58524dc211fd3a8962b6780968350a09 159 SMART SM00226 4 153 1.3E-57 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily JE55_RS02180 58524dc211fd3a8962b6780968350a09 159 SUPERFAMILY SSF52788 3 154 6.41E-55 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily JE55_RS02180 58524dc211fd3a8962b6780968350a09 159 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 151 2.6E-44 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily JE55_RS02180 58524dc211fd3a8962b6780968350a09 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 49 65 8.1E-24 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS02180 58524dc211fd3a8962b6780968350a09 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 83 98 8.1E-24 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS02180 58524dc211fd3a8962b6780968350a09 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 106 119 8.1E-24 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS02180 58524dc211fd3a8962b6780968350a09 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 6 23 8.1E-24 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS02180 58524dc211fd3a8962b6780968350a09 159 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 125 140 8.1E-24 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS17035 8fee2816556b4f1dc25b6b262a258aca 237 Pfam PF04542 Sigma-70 region 2 56 118 3.5E-12 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS17035 8fee2816556b4f1dc25b6b262a258aca 237 Gene3D G3DSA:1.10.10.10 147 192 1.5E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17035 8fee2816556b4f1dc25b6b262a258aca 237 Pfam PF08281 Sigma-70, region 4 153 203 5.9E-7 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS17035 8fee2816556b4f1dc25b6b262a258aca 237 Gene3D G3DSA:1.10.1740.10 47 118 4.3E-9 T 22-04-2016 JE55_RS17035 8fee2816556b4f1dc25b6b262a258aca 237 PANTHER PTHR30173 49 188 2.6E-23 T 22-04-2016 JE55_RS17035 8fee2816556b4f1dc25b6b262a258aca 237 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 51 199 7.1E-18 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS17035 8fee2816556b4f1dc25b6b262a258aca 237 SUPERFAMILY SSF88659 135 203 8.41E-10 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS17035 8fee2816556b4f1dc25b6b262a258aca 237 SUPERFAMILY SSF88946 49 134 1.22E-12 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 Pfam PF02754 Cysteine-rich domain 1064 1153 2.3E-7 T 22-04-2016 IPR004017 Cysteine-rich domain JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 Pfam PF02754 Cysteine-rich domain 1189 1257 0.0038 T 22-04-2016 IPR004017 Cysteine-rich domain JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 Pfam PF11880 Domain of unknown function (DUF3400) 1298 1342 6.7E-25 T 22-04-2016 IPR021817 Protein of unknown function DUF3400 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 SUPERFAMILY SSF46548 829 949 2.56E-13 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 Pfam PF12447 Protein of unknown function (DUF3683) 23 147 1.6E-51 T 22-04-2016 IPR022153 Protein of unknown function DUF3683 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 PANTHER PTHR11748 581 820 4.4E-32 T 22-04-2016 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 PANTHER PTHR11748 170 352 4.4E-32 T 22-04-2016 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 PANTHER PTHR11748 411 486 4.4E-32 T 22-04-2016 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 Pfam PF02913 FAD linked oxidases, C-terminal domain 461 579 3.1E-5 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 Pfam PF02913 FAD linked oxidases, C-terminal domain 731 818 8.0E-18 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 Gene3D G3DSA:1.10.1060.10 851 952 2.5E-14 T 22-04-2016 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 SUPERFAMILY SSF56176 161 428 1.8E-53 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 SUPERFAMILY SSF55103 459 592 1.09E-36 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 SUPERFAMILY SSF55103 738 818 1.09E-36 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 Pfam PF01565 FAD binding domain 197 342 1.2E-23 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 Gene3D G3DSA:3.30.43.10 152 313 4.2E-33 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 JE55_RS11545 d37da96c05225c71f33c5520cfaa97a8 1342 Pfam PF13183 4Fe-4S dicluster domain 854 933 2.2E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 Gene3D G3DSA:3.50.50.60 3 328 3.6E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 PANTHER PTHR11985 3 481 6.2E-175 T 22-04-2016 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 Pfam PF01266 FAD dependent oxidoreductase 8 328 5.0E-49 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 PANTHER PTHR11985:SF1 3 481 6.2E-175 T 22-04-2016 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 30 3.1E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 352 364 3.1E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 36 48 3.1E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 7 19 3.1E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 318 324 3.1E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 81 93 3.1E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 SUPERFAMILY SSF51905 6 304 6.04E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 12 29 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JE55_RS11825 c1b367eaa217b6e92744b82f671a45a2 510 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 386 485 1.0E-8 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 Gene3D G3DSA:1.10.420.10 581 702 5.0E-45 T 22-04-2016 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PANTHER PTHR30555:SF0 1 727 0.0 T 22-04-2016 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 6 727 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 19 41 8.8E-57 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 472 498 8.8E-57 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 259 282 8.8E-57 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 45 58 8.8E-57 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 60 85 8.8E-57 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 Hamap MF_01961 Catalase-peroxidase [katG]. 2 728 42.63 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 Pfam PF00141 Peroxidase 394 700 9.1E-38 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 Pfam PF00141 Peroxidase 70 387 5.0E-49 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 ProSitePatterns PS00436 Peroxidases active site signature. 83 94 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PRINTS PR00458 Haem peroxidase superfamily signature 161 173 8.6E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PRINTS PR00458 Haem peroxidase superfamily signature 143 160 8.6E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PRINTS PR00458 Haem peroxidase superfamily signature 310 325 8.6E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PRINTS PR00458 Haem peroxidase superfamily signature 251 266 8.6E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PRINTS PR00458 Haem peroxidase superfamily signature 83 97 8.6E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 PANTHER PTHR30555 1 727 0.0 T 22-04-2016 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 Gene3D G3DSA:1.10.420.10 243 266 1.1E-47 T 22-04-2016 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 Gene3D G3DSA:1.10.420.10 302 399 1.1E-47 T 22-04-2016 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 Gene3D G3DSA:1.10.520.10 40 182 6.3E-73 T 22-04-2016 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 Gene3D G3DSA:1.10.520.10 219 242 6.3E-73 T 22-04-2016 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 251 261 - T 22-04-2016 IPR019793 Peroxidases heam-ligand binding site JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 SUPERFAMILY SSF48113 15 422 5.89E-155 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 Gene3D G3DSA:1.10.520.10 424 580 4.1E-66 T 22-04-2016 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 Gene3D G3DSA:1.10.520.10 706 728 4.1E-66 T 22-04-2016 JE55_RS05375 b000362a0b58e7bfa582efaa85cff3e3 728 SUPERFAMILY SSF48113 422 727 1.92E-115 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 SUPERFAMILY SSF46689 219 264 4.93E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 Pfam PF12833 Helix-turn-helix domain 188 265 3.6E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 SUPERFAMILY SSF46689 166 216 8.36E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 Gene3D G3DSA:2.60.120.280 23 147 1.2E-8 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 260 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 Gene3D G3DSA:1.10.10.60 220 263 3.7E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 PANTHER PTHR11019:SF75 9 266 9.6E-52 T 22-04-2016 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 Gene3D G3DSA:1.10.10.60 164 219 2.3E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 SMART SM00342 182 264 2.3E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 SUPERFAMILY SSF51215 20 148 8.89E-14 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 Pfam PF02311 AraC-like ligand binding domain 20 145 8.1E-16 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JE55_RS17355 8ba957294067bb1c235393824a01ab82 266 PANTHER PTHR11019 9 266 9.6E-52 T 22-04-2016 JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 Gene3D G3DSA:3.90.105.10 38 61 1.1E-21 T 22-04-2016 JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 Gene3D G3DSA:3.90.105.10 161 181 1.1E-21 T 22-04-2016 JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 SUPERFAMILY SSF53218 196 346 1.31E-39 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 Pfam PF03453 MoeA N-terminal region (domain I and II) 20 186 1.3E-36 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 SUPERFAMILY SSF63867 352 430 2.22E-22 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 PANTHER PTHR10192:SF11 19 429 4.0E-143 T 22-04-2016 JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 SUPERFAMILY SSF63882 19 194 2.22E-49 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 SMART SM00852 199 343 4.3E-38 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 PANTHER PTHR10192 19 429 4.0E-143 T 22-04-2016 JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 196 338 5.4E-29 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 Gene3D G3DSA:2.40.340.10 357 426 3.5E-27 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 Gene3D G3DSA:3.40.980.10 182 356 6.8E-59 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 Gene3D G3DSA:2.170.190.11 62 160 1.1E-24 T 22-04-2016 JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 Pfam PF00994 Probable molybdopterin binding domain 201 341 1.5E-26 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS03250 7afe448b8f4327c8f8bfc095eba2dd00 432 Pfam PF03454 MoeA C-terminal region (domain IV) 357 428 2.1E-16 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS07810 9507cde1e385d18e5a9b6f6188ef0398 214 SUPERFAMILY SSF56281 2 208 6.29E-58 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS07810 9507cde1e385d18e5a9b6f6188ef0398 214 PANTHER PTHR11935 1 210 2.0E-113 T 22-04-2016 JE55_RS07810 9507cde1e385d18e5a9b6f6188ef0398 214 PANTHER PTHR11935:SF115 1 210 2.0E-113 T 22-04-2016 JE55_RS07810 9507cde1e385d18e5a9b6f6188ef0398 214 SMART SM00849 12 192 3.1E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS07810 9507cde1e385d18e5a9b6f6188ef0398 214 Gene3D G3DSA:3.60.15.10 3 209 5.1E-58 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS07810 9507cde1e385d18e5a9b6f6188ef0398 214 Pfam PF00753 Metallo-beta-lactamase superfamily 9 192 4.1E-34 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS15430 1660248992edd21af37c1008d7964c13 125 Gene3D G3DSA:3.10.450.50 2 119 1.0E-32 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS15430 1660248992edd21af37c1008d7964c13 125 SUPERFAMILY SSF54427 2 118 7.09E-28 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS15430 1660248992edd21af37c1008d7964c13 125 Pfam PF12893 Putative lumazine-binding 2 117 2.5E-24 T 22-04-2016 JE55_RS16000 74940a2f701772c71c64610b8d4ba6f2 416 Gene3D G3DSA:1.20.1250.20 28 210 1.9E-21 T 22-04-2016 JE55_RS16000 74940a2f701772c71c64610b8d4ba6f2 416 Pfam PF07690 Major Facilitator Superfamily 35 369 2.8E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS16000 74940a2f701772c71c64610b8d4ba6f2 416 SUPERFAMILY SSF103473 17 404 4.84E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS16000 74940a2f701772c71c64610b8d4ba6f2 416 Gene3D G3DSA:1.20.1250.20 232 405 1.0E-17 T 22-04-2016 JE55_RS16000 74940a2f701772c71c64610b8d4ba6f2 416 PANTHER PTHR23505:SF8 1 416 2.0E-147 T 22-04-2016 JE55_RS16000 74940a2f701772c71c64610b8d4ba6f2 416 PANTHER PTHR23505 1 416 2.0E-147 T 22-04-2016 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 Gene3D G3DSA:3.40.47.10 3 123 7.7E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 Gene3D G3DSA:3.40.47.10 194 276 7.7E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 PANTHER PTHR18919:SF95 1 393 1.0E-232 T 22-04-2016 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 SUPERFAMILY SSF53901 271 392 7.69E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 SUPERFAMILY SSF53901 3 270 1.1E-89 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 Pfam PF00108 Thiolase, N-terminal domain 4 262 8.2E-108 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 5.1E-150 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 PANTHER PTHR18919 1 393 1.0E-232 T 22-04-2016 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 Pfam PF02803 Thiolase, C-terminal domain 271 392 6.7E-54 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 PIRSF PIRSF000429 1 393 2.3E-134 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 Gene3D G3DSA:3.40.47.10 142 193 3.2E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00045 25a81068ea36dbb34ab7e37a9859e05b 393 Gene3D G3DSA:3.40.47.10 277 392 3.2E-72 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 Pfam PF00467 KOW motif 134 165 1.2E-7 T 22-04-2016 IPR005824 KOW JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 4.9E-20 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 4.9E-20 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 PRINTS PR00338 Transcription termination factor NUSG signature 65 77 4.9E-20 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 10 185 25.509 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 13 185 1.9E-69 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 PANTHER PTHR30265 11 185 1.1E-79 T 22-04-2016 JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 Pfam PF02357 Transcription termination factor nusG 11 116 4.6E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 SUPERFAMILY SSF50104 129 185 6.45E-20 T 22-04-2016 IPR008991 Translation protein SH3-like domain JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 SMART SM00739 131 158 7.7E-6 T 22-04-2016 IPR005824 KOW JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 Gene3D G3DSA:2.30.30.30 124 185 7.4E-31 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 Gene3D G3DSA:3.30.70.940 11 122 6.0E-46 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 SMART SM00738 10 119 2.5E-46 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 JE55_RS07455 47e9168e874fe55121e9ed08c4a92bcf 185 SUPERFAMILY SSF82679 11 121 6.93E-39 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 JE55_RS00540 04f36fa4d549bc175a47e65d2c56b477 269 PANTHER PTHR10060:SF20 1 259 1.1E-112 T 22-04-2016 JE55_RS00540 04f36fa4d549bc175a47e65d2c56b477 269 Pfam PF01026 TatD related DNase 3 256 1.1E-74 T 22-04-2016 IPR001130 TatD family GO:0016788 JE55_RS00540 04f36fa4d549bc175a47e65d2c56b477 269 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 256 5.2E-80 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 JE55_RS00540 04f36fa4d549bc175a47e65d2c56b477 269 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 JE55_RS00540 04f36fa4d549bc175a47e65d2c56b477 269 SUPERFAMILY SSF51556 1 257 2.2E-83 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS00540 04f36fa4d549bc175a47e65d2c56b477 269 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 JE55_RS00540 04f36fa4d549bc175a47e65d2c56b477 269 Gene3D G3DSA:3.20.20.140 1 257 8.8E-85 T 22-04-2016 JE55_RS00540 04f36fa4d549bc175a47e65d2c56b477 269 PANTHER PTHR10060 1 259 1.1E-112 T 22-04-2016 IPR001130 TatD family GO:0016788 JE55_RS00540 04f36fa4d549bc175a47e65d2c56b477 269 PIRSF PIRSF005902 1 260 1.1E-72 T 22-04-2016 IPR001130 TatD family GO:0016788 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PANTHER PTHR30587 15 253 4.1E-125 T 22-04-2016 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 54 73 1.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 73 93 1.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 202 223 1.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 93 112 1.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 251 1.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 181 201 1.4E-66 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PANTHER PTHR30587:SF0 15 253 4.1E-125 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 242 252 7.5E-29 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 152 164 7.5E-29 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 124 138 7.5E-29 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 52 61 7.5E-29 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 174 186 7.5E-29 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 112 124 7.5E-29 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 181 196 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 56 252 9.5E-91 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 229 241 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JE55_RS08755 f823f07b9fc3f74e6af67ab0527bfee2 253 Pfam PF00813 FliP family 56 248 7.7E-81 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 JE55_RS01330 8898acfad9cedf2b9b89f05131aedfa9 453 PANTHER PTHR33693 266 451 3.7E-77 T 22-04-2016 JE55_RS01330 8898acfad9cedf2b9b89f05131aedfa9 453 Gene3D G3DSA:3.40.470.10 266 445 1.6E-73 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS01330 8898acfad9cedf2b9b89f05131aedfa9 453 SMART SM00987 290 437 4.7E-44 T 22-04-2016 JE55_RS01330 8898acfad9cedf2b9b89f05131aedfa9 453 SMART SM00986 290 437 4.7E-44 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS01330 8898acfad9cedf2b9b89f05131aedfa9 453 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 276 436 1.3E-63 T 22-04-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain JE55_RS01330 8898acfad9cedf2b9b89f05131aedfa9 453 SUPERFAMILY SSF52141 265 441 4.91E-62 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS01330 8898acfad9cedf2b9b89f05131aedfa9 453 PANTHER PTHR33693:SF1 266 451 3.7E-77 T 22-04-2016 JE55_RS01330 8898acfad9cedf2b9b89f05131aedfa9 453 Pfam PF03167 Uracil DNA glycosylase superfamily 290 436 2.2E-46 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 SUPERFAMILY SSF53850 91 299 2.02E-40 T 22-04-2016 JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 Gene3D G3DSA:3.40.190.10 185 261 2.3E-26 T 22-04-2016 JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 Pfam PF03466 LysR substrate binding domain 89 291 3.1E-40 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 SUPERFAMILY SSF46785 12 113 4.68E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 PANTHER PTHR30126 1 309 3.6E-134 T 22-04-2016 JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.0E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.0E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.0E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 64 2.1E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 Gene3D G3DSA:3.40.190.10 91 184 6.0E-23 T 22-04-2016 JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 PANTHER PTHR30126:SF6 1 309 3.6E-134 T 22-04-2016 JE55_RS13060 9c6a46073476137393de01cc1577bf76 313 Gene3D G3DSA:1.10.10.10 1 81 3.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 PANTHER PTHR11252 2 713 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Pfam PF01138 3' exoribonuclease family, domain 1 17 146 3.0E-20 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Pfam PF01138 3' exoribonuclease family, domain 1 331 463 2.3E-23 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 SUPERFAMILY SSF55666 457 555 2.38E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 5 700 30.232 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 698 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Gene3D G3DSA:3.30.1370.10 559 625 7.4E-27 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Gene3D G3DSA:1.10.10.400 241 319 5.2E-21 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Gene3D G3DSA:3.30.230.70 320 549 1.4E-90 T 22-04-2016 IPR027408 PNPase/RNase PH domain JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Gene3D G3DSA:3.30.230.70 5 226 7.4E-84 T 22-04-2016 IPR027408 PNPase/RNase PH domain JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 SUPERFAMILY SSF46915 241 328 1.1E-16 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Gene3D G3DSA:2.40.50.140 626 701 3.0E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Pfam PF00013 KH domain 564 620 1.6E-10 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 SMART SM00316 627 697 1.7E-23 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 SUPERFAMILY SSF54791 561 647 1.37E-23 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Pfam PF00575 S1 RNA binding domain 626 697 7.5E-17 T 22-04-2016 IPR003029 S1 domain GO:0003676 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 PIRSF PIRSF005499 3 713 1.4E-298 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 SUPERFAMILY SSF50249 627 704 2.76E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Pfam PF03725 3' exoribonuclease family, domain 2 149 212 3.3E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Pfam PF03725 3' exoribonuclease family, domain 2 468 536 9.9E-5 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 SUPERFAMILY SSF54211 301 495 2.18E-50 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 SMART SM00322 559 624 1.4E-13 T 22-04-2016 IPR004087 K Homology domain GO:0003676 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 327 1.7E-18 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 SUPERFAMILY SSF54211 4 146 5.06E-51 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 PANTHER PTHR11252:SF0 2 713 0.0 T 22-04-2016 JE55_RS14370 c75a13b8ddcb223957862c81593bd22e 713 SUPERFAMILY SSF55666 147 237 3.79E-30 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 JE55_RS15895 ce77398aef52ac98de21cd7792d08c02 234 SMART SM00382 29 212 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS15895 ce77398aef52ac98de21cd7792d08c02 234 PANTHER PTHR24220 6 222 1.5E-67 T 22-04-2016 JE55_RS15895 ce77398aef52ac98de21cd7792d08c02 234 SUPERFAMILY SSF52540 4 222 1.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15895 ce77398aef52ac98de21cd7792d08c02 234 Gene3D G3DSA:3.40.50.300 2 222 8.8E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15895 ce77398aef52ac98de21cd7792d08c02 234 Pfam PF00005 ABC transporter 20 163 1.1E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS15895 ce77398aef52ac98de21cd7792d08c02 234 PANTHER PTHR24220:SF568 6 222 1.5E-67 T 22-04-2016 JE55_RS07080 a1952ddb01fa7fba94162dbbe74c1f72 377 Gene3D G3DSA:3.30.9.10 156 301 5.0E-22 T 22-04-2016 JE55_RS07080 a1952ddb01fa7fba94162dbbe74c1f72 377 Pfam PF01266 FAD dependent oxidoreductase 9 338 2.3E-30 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JE55_RS07080 a1952ddb01fa7fba94162dbbe74c1f72 377 SUPERFAMILY SSF51905 7 265 1.99E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS07080 a1952ddb01fa7fba94162dbbe74c1f72 377 Gene3D G3DSA:3.50.50.60 6 46 6.9E-9 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS10690 ac65be5fa3e778893f7311bae376a9d3 249 PANTHER PTHR11931 1 248 1.4E-165 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 JE55_RS10690 ac65be5fa3e778893f7311bae376a9d3 249 SMART SM00855 3 189 2.1E-27 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS10690 ac65be5fa3e778893f7311bae376a9d3 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 127 1.1E-29 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS10690 ac65be5fa3e778893f7311bae376a9d3 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 142 217 5.7E-5 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS10690 ac65be5fa3e778893f7311bae376a9d3 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 246 4.5E-120 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 JE55_RS10690 ac65be5fa3e778893f7311bae376a9d3 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 46.179 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 JE55_RS10690 ac65be5fa3e778893f7311bae376a9d3 249 Gene3D G3DSA:3.40.50.1240 1 247 3.9E-99 T 22-04-2016 IPR029033 Histidine phosphatase superfamily JE55_RS10690 ac65be5fa3e778893f7311bae376a9d3 249 SUPERFAMILY SSF53254 1 244 1.49E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily JE55_RS10690 ac65be5fa3e778893f7311bae376a9d3 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 JE55_RS12400 012e8fea68eb96927f774f2e66a8bdd3 286 Gene3D G3DSA:3.40.50.1820 6 284 1.9E-80 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS12400 012e8fea68eb96927f774f2e66a8bdd3 286 PANTHER PTHR10061 5 286 9.0E-165 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 JE55_RS12400 012e8fea68eb96927f774f2e66a8bdd3 286 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 7 284 7.8E-145 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 JE55_RS12400 012e8fea68eb96927f774f2e66a8bdd3 286 SUPERFAMILY SSF53474 6 285 5.23E-85 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS12400 012e8fea68eb96927f774f2e66a8bdd3 286 Pfam PF00756 Putative esterase 26 277 2.5E-55 T 22-04-2016 IPR000801 Putative esterase JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 PRINTS PR00996 Glutamate methyltransferase family signature 91 103 7.9E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 PRINTS PR00996 Glutamate methyltransferase family signature 231 245 7.9E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 PRINTS PR00996 Glutamate methyltransferase family signature 52 65 7.9E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 PRINTS PR00996 Glutamate methyltransferase family signature 124 144 7.9E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 PRINTS PR00996 Glutamate methyltransferase family signature 250 273 7.9E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 PRINTS PR00996 Glutamate methyltransferase family signature 159 175 7.9E-43 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 PIRSF PIRSF000410 13 292 6.9E-95 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 PANTHER PTHR24422 26 293 4.6E-114 T 22-04-2016 JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 SUPERFAMILY SSF53335 98 288 1.04E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 SMART SM00138 30 291 6.0E-98 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 Gene3D G3DSA:3.40.50.150 97 288 1.5E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 Gene3D G3DSA:1.10.155.10 23 96 1.1E-28 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 Pfam PF03705 CheR methyltransferase, all-alpha domain 31 81 1.3E-16 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 Pfam PF01739 CheR methyltransferase, SAM binding domain 98 287 6.1E-57 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 PANTHER PTHR24422:SF13 26 293 4.6E-114 T 22-04-2016 JE55_RS07940 effdd4bd87c2c4b39aa3d559ce41b5c0 315 SUPERFAMILY SSF47757 23 97 6.93E-21 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal JE55_RS10410 7937fcca261c4b403163b509a0e224d6 317 Pfam PF09339 IclR helix-turn-helix domain 63 114 1.3E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JE55_RS10410 7937fcca261c4b403163b509a0e224d6 317 PANTHER PTHR30136 37 317 3.8E-84 T 22-04-2016 JE55_RS10410 7937fcca261c4b403163b509a0e224d6 317 Gene3D G3DSA:1.10.10.10 55 130 1.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10410 7937fcca261c4b403163b509a0e224d6 317 Gene3D G3DSA:3.30.450.40 131 312 3.4E-38 T 22-04-2016 IPR029016 GAF domain-like JE55_RS10410 7937fcca261c4b403163b509a0e224d6 317 SUPERFAMILY SSF55781 133 310 2.94E-30 T 22-04-2016 IPR029016 GAF domain-like JE55_RS10410 7937fcca261c4b403163b509a0e224d6 317 PANTHER PTHR30136:SF8 37 317 3.8E-84 T 22-04-2016 JE55_RS10410 7937fcca261c4b403163b509a0e224d6 317 SMART SM00346 61 151 2.2E-16 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JE55_RS10410 7937fcca261c4b403163b509a0e224d6 317 Pfam PF01614 Bacterial transcriptional regulator 181 306 1.7E-7 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal JE55_RS10410 7937fcca261c4b403163b509a0e224d6 317 SUPERFAMILY SSF46785 61 134 4.69E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 253 281 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 Pfam PF07478 D-ala D-ala ligase C-terminus 110 307 9.8E-56 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 Gene3D G3DSA:3.40.50.20 11 91 1.8E-24 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 Pfam PF01820 D-ala D-ala ligase N-terminus 11 93 4.1E-17 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 PANTHER PTHR23132 1 311 4.5E-79 T 22-04-2016 JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 11 309 3.7E-94 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 70 81 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 PIRSF PIRSF039102 49 312 1.7E-76 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 SUPERFAMILY SSF52440 11 103 1.63E-25 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 Gene3D G3DSA:3.30.1490.20 114 184 9.6E-24 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 Gene3D G3DSA:3.30.470.20 185 309 7.3E-42 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 Gene3D G3DSA:3.30.470.20 92 110 7.3E-42 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 10 311 33.0 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06290 5758b834fc218ff37e7b51f1cc5b3454 312 SUPERFAMILY SSF56059 103 308 3.36E-52 T 22-04-2016 JE55_RS05265 6edaa251b1e1640c95dec98e8129f755 362 SUPERFAMILY SSF56176 11 173 4.63E-31 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS05265 6edaa251b1e1640c95dec98e8129f755 362 SUPERFAMILY SSF55103 183 361 1.6E-16 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JE55_RS05265 6edaa251b1e1640c95dec98e8129f755 362 PANTHER PTHR11748:SF1 14 358 1.3E-75 T 22-04-2016 JE55_RS05265 6edaa251b1e1640c95dec98e8129f755 362 Pfam PF01565 FAD binding domain 11 135 5.0E-21 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JE55_RS05265 6edaa251b1e1640c95dec98e8129f755 362 Gene3D G3DSA:3.30.465.10 52 173 9.3E-22 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 JE55_RS05265 6edaa251b1e1640c95dec98e8129f755 362 PANTHER PTHR11748 14 358 1.3E-75 T 22-04-2016 JE55_RS09695 7e537aecadf9860abb3d6cb9ba81719c 254 SUPERFAMILY SSF88713 1 243 1.7E-93 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JE55_RS09695 7e537aecadf9860abb3d6cb9ba81719c 254 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 44.175 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF JE55_RS09695 7e537aecadf9860abb3d6cb9ba81719c 254 Pfam PF03746 LamB/YcsF family 3 236 3.3E-95 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF JE55_RS09695 7e537aecadf9860abb3d6cb9ba81719c 254 PANTHER PTHR30292 1 247 1.1E-122 T 22-04-2016 JE55_RS09695 7e537aecadf9860abb3d6cb9ba81719c 254 PANTHER PTHR30292:SF0 1 247 1.1E-122 T 22-04-2016 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 510 5.4E-251 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 Gene3D G3DSA:1.20.150.20 383 510 1.1E-49 T 22-04-2016 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 PANTHER PTHR15184 1 497 1.2E-294 T 22-04-2016 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.983 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 1.3E-46 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.1E-75 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 2.0E-15 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 PANTHER PTHR15184:SF3 1 497 1.2E-294 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 Gene3D G3DSA:2.40.30.20 1 93 5.2E-35 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 PIRSF PIRSF039088 1 513 3.1E-240 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 Gene3D G3DSA:3.40.50.300 94 382 8.6E-114 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 SUPERFAMILY SSF50615 10 94 1.77E-29 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 SUPERFAMILY SSF52540 96 381 1.03E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08430 d1019ece929599588cf376a3db54c8ac 513 SUPERFAMILY SSF47917 383 510 1.52E-47 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 PANTHER PTHR18919:SF14 1 392 9.4E-218 T 22-04-2016 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 Gene3D G3DSA:3.40.47.10 142 184 2.0E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 Gene3D G3DSA:3.40.47.10 276 391 2.0E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 Pfam PF00108 Thiolase, N-terminal domain 5 261 3.2E-62 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 SUPERFAMILY SSF53901 271 391 2.48E-42 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 3.5E-127 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 PIRSF PIRSF000429 1 392 2.6E-120 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 Pfam PF02803 Thiolase, C-terminal domain 270 390 4.4E-45 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 PANTHER PTHR18919 1 392 9.4E-218 T 22-04-2016 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 Gene3D G3DSA:3.40.47.10 185 273 1.3E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 Gene3D G3DSA:3.40.47.10 4 125 1.3E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00605 2876be3dc0ede5a35034da1f0a518f54 392 SUPERFAMILY SSF53901 1 266 1.73E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 Pfam PF04055 Radical SAM superfamily 157 342 2.4E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 155 175 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 SMART SM00729 151 384 3.7E-47 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 Pfam PF01938 TRAM domain 396 463 4.5E-5 T 22-04-2016 IPR002792 TRAM domain JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 PANTHER PTHR11918 15 463 2.0E-213 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 Gene3D G3DSA:3.80.30.20 149 394 6.7E-68 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 16 461 5.4E-97 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 15 463 60.372 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 Gene3D G3DSA:2.40.50.140 399 463 1.5E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 16 461 2.8E-165 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 SUPERFAMILY SSF102114 127 389 1.7E-48 T 22-04-2016 JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 Pfam PF00919 Uncharacterized protein family UPF0004 16 95 5.4E-19 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 JE55_RS00030 b16d714cd49c9a9f4e3ae3e53bb57214 463 PANTHER PTHR11918:SF57 15 463 2.0E-213 T 22-04-2016 JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 PANTHER PTHR23151 3 173 2.8E-217 T 22-04-2016 JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 PANTHER PTHR23151 189 425 2.8E-217 T 22-04-2016 JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 Pfam PF00364 Biotin-requiring enzyme 5 77 6.4E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 Gene3D G3DSA:3.30.559.10 193 423 1.6E-92 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 SUPERFAMILY SSF51230 2 95 2.36E-26 T 22-04-2016 IPR011053 Single hybrid motif JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 Gene3D G3DSA:2.40.50.100 2 94 1.1E-27 T 22-04-2016 JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 SUPERFAMILY SSF52777 195 424 5.78E-90 T 22-04-2016 JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 SUPERFAMILY SSF47005 115 157 1.57E-9 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 195 423 2.2E-81 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 Pfam PF02817 e3 binding domain 122 155 6.9E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 424 1.5E-171 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 Gene3D G3DSA:4.10.320.10 118 166 1.3E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 PANTHER PTHR23151:SF47 3 173 2.8E-217 T 22-04-2016 JE55_RS16370 ec0edb57cd3d6369193775aaa5dffb5c 425 PANTHER PTHR23151:SF47 189 425 2.8E-217 T 22-04-2016 JE55_RS04625 f1c4c1f6fbfd6f82b4af9f3a4e22e8b7 263 SMART SM00382 30 214 7.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS04625 f1c4c1f6fbfd6f82b4af9f3a4e22e8b7 263 PANTHER PTHR24220:SF309 6 260 2.9E-97 T 22-04-2016 JE55_RS04625 f1c4c1f6fbfd6f82b4af9f3a4e22e8b7 263 Gene3D G3DSA:3.40.50.300 5 229 6.0E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04625 f1c4c1f6fbfd6f82b4af9f3a4e22e8b7 263 Pfam PF00005 ABC transporter 21 170 4.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS04625 f1c4c1f6fbfd6f82b4af9f3a4e22e8b7 263 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS04625 f1c4c1f6fbfd6f82b4af9f3a4e22e8b7 263 PANTHER PTHR24220 6 260 2.9E-97 T 22-04-2016 JE55_RS04625 f1c4c1f6fbfd6f82b4af9f3a4e22e8b7 263 SUPERFAMILY SSF52540 5 228 5.43E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01690 ec288bf0d2cfbd0a424456f66a568818 191 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 JE55_RS01690 ec288bf0d2cfbd0a424456f66a568818 191 PANTHER PTHR11071:SF192 31 189 4.5E-60 T 22-04-2016 JE55_RS01690 ec288bf0d2cfbd0a424456f66a568818 191 SUPERFAMILY SSF50891 26 188 2.34E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain JE55_RS01690 ec288bf0d2cfbd0a424456f66a568818 191 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 30 187 4.7E-48 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 JE55_RS01690 ec288bf0d2cfbd0a424456f66a568818 191 Gene3D G3DSA:2.40.100.10 26 189 1.1E-54 T 22-04-2016 IPR029000 Cyclophilin-like domain JE55_RS01690 ec288bf0d2cfbd0a424456f66a568818 191 PANTHER PTHR11071 31 189 4.5E-60 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 JE55_RS01690 ec288bf0d2cfbd0a424456f66a568818 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 9.3E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 JE55_RS01690 ec288bf0d2cfbd0a424456f66a568818 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 9.3E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 JE55_RS01690 ec288bf0d2cfbd0a424456f66a568818 191 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 43 58 9.3E-14 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PIRSF PIRSF037149 1 813 0.0 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.3E-21 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.3E-21 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 2.3E-21 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.3E-21 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 2.3E-21 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 562 623 8.2E-14 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 Gene3D G3DSA:3.30.413.10 633 768 6.5E-37 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 768 6.5E-27 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 Gene3D G3DSA:3.50.50.60 111 306 4.4E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PANTHER PTHR22912 1 415 2.5E-155 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 Gene3D G3DSA:3.50.50.60 2 110 4.0E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 SUPERFAMILY SSF56014 633 800 6.28E-51 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 797 5.8E-283 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 SUPERFAMILY SSF51905 2 193 1.73E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 SUPERFAMILY SSF51905 143 311 2.96E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 1.2E-7 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 1.2E-7 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 470 5.3E-13 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 Pfam PF04324 BFD-like [2Fe-2S] binding domain 486 535 3.5E-14 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 SUPERFAMILY SSF55124 521 628 1.5E-24 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PANTHER PTHR22912:SF1 1 415 2.5E-155 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 282 4.4E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.9E-12 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 4.9E-12 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.9E-12 T 22-04-2016 JE55_RS11060 5c47bd12916e98e9967e835979d678ce 814 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 4.9E-12 T 22-04-2016 JE55_RS13485 1dd0de0f31194e804b0f1951ccdab481 585 Gene3D G3DSA:1.10.3720.10 381 571 4.2E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS13485 1dd0de0f31194e804b0f1951ccdab481 585 SUPERFAMILY SSF161098 67 261 3.4E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS13485 1dd0de0f31194e804b0f1951ccdab481 585 PANTHER PTHR30151:SF10 71 229 4.3E-158 T 22-04-2016 JE55_RS13485 1dd0de0f31194e804b0f1951ccdab481 585 PANTHER PTHR30151:SF10 376 582 4.3E-158 T 22-04-2016 JE55_RS13485 1dd0de0f31194e804b0f1951ccdab481 585 SUPERFAMILY SSF161098 380 570 2.22E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS13485 1dd0de0f31194e804b0f1951ccdab481 585 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 399 567 9.9E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS13485 1dd0de0f31194e804b0f1951ccdab481 585 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 258 2.2E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS13485 1dd0de0f31194e804b0f1951ccdab481 585 PANTHER PTHR30151 71 229 4.3E-158 T 22-04-2016 JE55_RS13485 1dd0de0f31194e804b0f1951ccdab481 585 PANTHER PTHR30151 376 582 4.3E-158 T 22-04-2016 JE55_RS13485 1dd0de0f31194e804b0f1951ccdab481 585 Gene3D G3DSA:1.10.3720.10 63 258 1.9E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS19700 9d253573bd56d41d5b16e90807a40c56 234 PANTHER PTHR21152 14 234 1.7E-87 T 22-04-2016 JE55_RS19700 9d253573bd56d41d5b16e90807a40c56 234 SUPERFAMILY SSF53383 1 233 2.27E-59 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS19700 9d253573bd56d41d5b16e90807a40c56 234 PANTHER PTHR21152:SF1 14 234 1.7E-87 T 22-04-2016 JE55_RS19700 9d253573bd56d41d5b16e90807a40c56 234 Gene3D G3DSA:3.40.640.10 1 234 2.1E-84 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS19700 9d253573bd56d41d5b16e90807a40c56 234 Pfam PF00266 Aminotransferase class-V 19 233 3.6E-21 T 22-04-2016 IPR000192 Aminotransferase class V domain JE55_RS05020 313abce4a90c8e6b4321429c1348c519 192 SUPERFAMILY SSF53697 3 186 4.65E-53 T 22-04-2016 JE55_RS05020 313abce4a90c8e6b4321429c1348c519 192 PANTHER PTHR30390:SF6 1 189 7.2E-78 T 22-04-2016 JE55_RS05020 313abce4a90c8e6b4321429c1348c519 192 Pfam PF13580 SIS domain 11 145 1.4E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS05020 313abce4a90c8e6b4321429c1348c519 192 Gene3D G3DSA:3.40.50.10490 3 190 1.7E-66 T 22-04-2016 JE55_RS05020 313abce4a90c8e6b4321429c1348c519 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 188 37.971 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 JE55_RS05020 313abce4a90c8e6b4321429c1348c519 192 PANTHER PTHR30390 1 189 7.2E-78 T 22-04-2016 JE55_RS15215 38e71c0fd72d17b720395926b59c95d3 167 Pfam PF13664 Domain of unknown function (DUF4149) 13 109 5.1E-21 T 22-04-2016 IPR025423 Domain of unknown function DUF4149 JE55_RS08520 7e541a4cb0abed9631a010c20a7212f2 398 Gene3D G3DSA:3.40.50.2300 156 301 1.6E-18 T 22-04-2016 JE55_RS08520 7e541a4cb0abed9631a010c20a7212f2 398 PANTHER PTHR30483 1 398 5.6E-186 T 22-04-2016 JE55_RS08520 7e541a4cb0abed9631a010c20a7212f2 398 Gene3D G3DSA:3.40.50.2300 302 349 1.5E-34 T 22-04-2016 JE55_RS08520 7e541a4cb0abed9631a010c20a7212f2 398 Gene3D G3DSA:3.40.50.2300 22 147 1.5E-34 T 22-04-2016 JE55_RS08520 7e541a4cb0abed9631a010c20a7212f2 398 SUPERFAMILY SSF53822 28 397 1.14E-92 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS08520 7e541a4cb0abed9631a010c20a7212f2 398 PANTHER PTHR30483:SF17 1 398 5.6E-186 T 22-04-2016 JE55_RS08520 7e541a4cb0abed9631a010c20a7212f2 398 Pfam PF13458 Periplasmic binding protein 27 362 3.6E-91 T 22-04-2016 IPR028081 Leucine-binding protein domain JE55_RS04175 57cfb94fce072cd97adc6f38f91f8712 118 SUPERFAMILY SSF54913 1 100 1.33E-27 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta JE55_RS04175 57cfb94fce072cd97adc6f38f91f8712 118 Gene3D G3DSA:3.30.70.120 1 115 3.3E-35 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JE55_RS04175 57cfb94fce072cd97adc6f38f91f8712 118 Pfam PF02641 Uncharacterized ACR, COG1993 6 86 4.2E-21 T 22-04-2016 IPR003793 Domain of unknown function DUF190 JE55_RS04175 57cfb94fce072cd97adc6f38f91f8712 118 PANTHER PTHR35983 1 96 1.4E-15 T 22-04-2016 JE55_RS00560 3c76fb60391af31059476b01b0d3a14d 339 PANTHER PTHR30518 10 337 3.9E-84 T 22-04-2016 JE55_RS00560 3c76fb60391af31059476b01b0d3a14d 339 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 13 337 1.6E-78 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like JE55_RS00560 3c76fb60391af31059476b01b0d3a14d 339 PANTHER PTHR30518:SF2 10 337 3.9E-84 T 22-04-2016 JE55_RS00560 3c76fb60391af31059476b01b0d3a14d 339 Gene3D G3DSA:3.30.160.60 308 337 1.9E-15 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 JE55_RS00560 3c76fb60391af31059476b01b0d3a14d 339 Pfam PF02618 YceG-like family 43 334 8.2E-81 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like JE55_RS05930 f6c77636fe3c0f2ad75de61dc3c7bebc 331 PANTHER PTHR30036 25 296 7.3E-47 T 22-04-2016 JE55_RS05930 f6c77636fe3c0f2ad75de61dc3c7bebc 331 Gene3D G3DSA:3.40.50.2300 151 301 3.7E-46 T 22-04-2016 JE55_RS05930 f6c77636fe3c0f2ad75de61dc3c7bebc 331 SUPERFAMILY SSF53822 28 326 7.28E-63 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS05930 f6c77636fe3c0f2ad75de61dc3c7bebc 331 PANTHER PTHR30036:SF1 25 296 7.3E-47 T 22-04-2016 JE55_RS05930 f6c77636fe3c0f2ad75de61dc3c7bebc 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 29 304 2.3E-45 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain JE55_RS05930 f6c77636fe3c0f2ad75de61dc3c7bebc 331 Gene3D G3DSA:3.40.50.2300 27 150 1.0E-37 T 22-04-2016 JE55_RS05930 f6c77636fe3c0f2ad75de61dc3c7bebc 331 PIRSF PIRSF002816 1 328 5.1E-140 T 22-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 JE55_RS18135 aed84e470f02580be437dcb3c5fe4dc2 343 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 8.7E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS18135 aed84e470f02580be437dcb3c5fe4dc2 343 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 8.7E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS18135 aed84e470f02580be437dcb3c5fe4dc2 343 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 8.7E-9 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS18135 aed84e470f02580be437dcb3c5fe4dc2 343 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS18135 aed84e470f02580be437dcb3c5fe4dc2 343 SMART SM00422 3 72 5.2E-29 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS18135 aed84e470f02580be437dcb3c5fe4dc2 343 Gene3D G3DSA:1.10.1660.10 2 56 1.0E-25 T 22-04-2016 JE55_RS18135 aed84e470f02580be437dcb3c5fe4dc2 343 SUPERFAMILY SSF46955 3 109 5.86E-28 T 22-04-2016 IPR009061 Putative DNA-binding domain JE55_RS18135 aed84e470f02580be437dcb3c5fe4dc2 343 PANTHER PTHR30204 1 276 8.6E-38 T 22-04-2016 JE55_RS18135 aed84e470f02580be437dcb3c5fe4dc2 343 PANTHER PTHR30204:SF6 1 276 8.6E-38 T 22-04-2016 JE55_RS18135 aed84e470f02580be437dcb3c5fe4dc2 343 Pfam PF13411 MerR HTH family regulatory protein 4 70 3.5E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS18135 aed84e470f02580be437dcb3c5fe4dc2 343 Gene3D G3DSA:1.10.1660.10 57 110 3.4E-7 T 22-04-2016 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 15 899 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 PANTHER PTHR11533 629 899 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 PANTHER PTHR11533 7 607 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 SUPERFAMILY SSF55486 211 463 3.96E-73 T 22-04-2016 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 PANTHER PTHR11533:SF152 629 899 0.0 T 22-04-2016 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 PANTHER PTHR11533:SF152 7 607 0.0 T 22-04-2016 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 Pfam PF01433 Peptidase family M1 120 397 1.1E-61 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 SUPERFAMILY SSF63737 11 197 3.4E-39 T 22-04-2016 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 181 196 8.4E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 318 330 8.4E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 131 146 8.4E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 299 314 8.4E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 263 273 8.4E-10 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 Pfam PF11940 Domain of unknown function (DUF3458) 472 858 9.3E-146 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 Gene3D G3DSA:1.10.390.10 313 464 2.9E-30 T 22-04-2016 JE55_RS03745 871fa6133b8bfb37dc4a4b01bdefeb5b 900 Gene3D G3DSA:1.25.50.10 566 900 1.2E-128 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 71 1.7E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 Gene3D G3DSA:1.10.10.10 8 86 4.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 PANTHER PTHR30118 11 314 2.5E-71 T 22-04-2016 JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 Gene3D G3DSA:3.40.190.10 185 276 4.4E-25 T 22-04-2016 JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 6.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 6.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 6.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 PANTHER PTHR30118:SF4 11 314 2.5E-71 T 22-04-2016 JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 Pfam PF03466 LysR substrate binding domain 100 302 1.8E-20 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 SUPERFAMILY SSF53850 95 301 9.23E-33 T 22-04-2016 JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 SUPERFAMILY SSF46785 11 86 1.53E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 Gene3D G3DSA:3.40.190.10 95 184 2.3E-28 T 22-04-2016 JE55_RS04610 9d83e06524746460a8df5ae5049dcec6 315 Gene3D G3DSA:3.40.190.10 292 308 2.3E-28 T 22-04-2016 JE55_RS12860 b8344b3ae023d4a2c0d979ed1ff8a35c 403 Gene3D G3DSA:3.40.50.1950 5 188 2.0E-68 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 JE55_RS12860 b8344b3ae023d4a2c0d979ed1ff8a35c 403 SUPERFAMILY SSF102645 174 398 2.75E-69 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 JE55_RS12860 b8344b3ae023d4a2c0d979ed1ff8a35c 403 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 6 393 3.5E-126 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 JE55_RS12860 b8344b3ae023d4a2c0d979ed1ff8a35c 403 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 369 2.9E-60 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 JE55_RS12860 b8344b3ae023d4a2c0d979ed1ff8a35c 403 Pfam PF02441 Flavoprotein 9 137 2.9E-34 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 JE55_RS12860 b8344b3ae023d4a2c0d979ed1ff8a35c 403 PANTHER PTHR14359 2 400 4.9E-167 T 22-04-2016 JE55_RS12860 b8344b3ae023d4a2c0d979ed1ff8a35c 403 Gene3D G3DSA:3.40.50.10300 189 398 8.0E-77 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 JE55_RS12860 b8344b3ae023d4a2c0d979ed1ff8a35c 403 SUPERFAMILY SSF52507 6 184 7.19E-62 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 JE55_RS12860 b8344b3ae023d4a2c0d979ed1ff8a35c 403 PANTHER PTHR14359:SF20 2 400 4.9E-167 T 22-04-2016 JE55_RS16615 a402a540e3dd08d52aa9f6774efc25c8 181 PANTHER PTHR22769:SF17 1 174 2.4E-81 T 22-04-2016 JE55_RS16615 a402a540e3dd08d52aa9f6774efc25c8 181 Pfam PF14803 Nudix N-terminal 2 35 1.2E-17 T 22-04-2016 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.-+3.6.1.13|KEGG: 00332+3.6.1.-|KEGG: 00740+3.6.1.18|KEGG: 00790+3.6.1.- JE55_RS16615 a402a540e3dd08d52aa9f6774efc25c8 181 Gene3D G3DSA:3.90.79.10 36 171 3.2E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS16615 a402a540e3dd08d52aa9f6774efc25c8 181 Gene3D G3DSA:2.20.70.10 1 35 1.6E-19 T 22-04-2016 JE55_RS16615 a402a540e3dd08d52aa9f6774efc25c8 181 Pfam PF00293 NUDIX domain 38 141 1.3E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 JE55_RS16615 a402a540e3dd08d52aa9f6774efc25c8 181 ProSitePatterns PS00893 Nudix box signature. 70 91 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JE55_RS16615 a402a540e3dd08d52aa9f6774efc25c8 181 SUPERFAMILY SSF55811 2 162 1.0E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS16615 a402a540e3dd08d52aa9f6774efc25c8 181 PRINTS PR00502 NUDIX hydrolase family signature 65 79 6.6E-6 T 22-04-2016 IPR020476 NUDIX hydrolase JE55_RS16615 a402a540e3dd08d52aa9f6774efc25c8 181 PRINTS PR00502 NUDIX hydrolase family signature 79 94 6.6E-6 T 22-04-2016 IPR020476 NUDIX hydrolase JE55_RS16615 a402a540e3dd08d52aa9f6774efc25c8 181 PANTHER PTHR22769 1 174 2.4E-81 T 22-04-2016 JE55_RS13730 5832df82ac1b09a825c189e749c3f421 393 Gene3D G3DSA:3.40.640.10 64 272 3.0E-71 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS13730 5832df82ac1b09a825c189e749c3f421 393 Gene3D G3DSA:3.90.1150.10 273 390 3.0E-12 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS13730 5832df82ac1b09a825c189e749c3f421 393 PANTHER PTHR11751:SF294 20 393 3.2E-124 T 22-04-2016 JE55_RS13730 5832df82ac1b09a825c189e749c3f421 393 SUPERFAMILY SSF53383 10 391 4.65E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS13730 5832df82ac1b09a825c189e749c3f421 393 Pfam PF00155 Aminotransferase class I and II 51 385 4.6E-28 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS13730 5832df82ac1b09a825c189e749c3f421 393 PANTHER PTHR11751 20 393 3.2E-124 T 22-04-2016 JE55_RS10285 9401167e6b7ae9bbde186fad6cf975b8 237 PANTHER PTHR12598 1 219 7.0E-69 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 JE55_RS10285 9401167e6b7ae9bbde186fad6cf975b8 237 Gene3D G3DSA:3.20.20.380 6 231 3.0E-69 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 JE55_RS10285 9401167e6b7ae9bbde186fad6cf975b8 237 Pfam PF03932 CutC family 7 206 3.0E-53 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 JE55_RS10285 9401167e6b7ae9bbde186fad6cf975b8 237 SUPERFAMILY SSF110395 6 231 4.71E-56 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 JE55_RS10285 9401167e6b7ae9bbde186fad6cf975b8 237 PANTHER PTHR12598:SF0 1 219 7.0E-69 T 22-04-2016 JE55_RS01185 88738e2a109b673d03273279a0ab4bbc 237 Pfam PF00696 Amino acid kinase family 6 215 7.8E-31 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS01185 88738e2a109b673d03273279a0ab4bbc 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 3 236 44.495 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 JE55_RS01185 88738e2a109b673d03273279a0ab4bbc 237 PIRSF PIRSF005650 1 237 1.4E-93 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 JE55_RS01185 88738e2a109b673d03273279a0ab4bbc 237 SUPERFAMILY SSF53633 4 236 5.89E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS01185 88738e2a109b673d03273279a0ab4bbc 237 PANTHER PTHR21499 5 235 8.6E-113 T 22-04-2016 JE55_RS01185 88738e2a109b673d03273279a0ab4bbc 237 PANTHER PTHR21499:SF23 5 235 8.6E-113 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 JE55_RS01185 88738e2a109b673d03273279a0ab4bbc 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 236 8.6E-101 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 JE55_RS01185 88738e2a109b673d03273279a0ab4bbc 237 Gene3D G3DSA:3.40.1160.10 3 236 3.7E-88 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS09370 b1c04e7c4c7987c0ee7fb6c3b0eb5046 381 PANTHER PTHR32268:SF11 2 379 2.0E-169 T 22-04-2016 JE55_RS09370 b1c04e7c4c7987c0ee7fb6c3b0eb5046 381 Gene3D G3DSA:3.40.50.1820 14 217 2.0E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS09370 b1c04e7c4c7987c0ee7fb6c3b0eb5046 381 Gene3D G3DSA:3.40.50.1820 255 369 2.0E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS09370 b1c04e7c4c7987c0ee7fb6c3b0eb5046 381 PIRSF PIRSF000443 1 380 8.5E-141 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 JE55_RS09370 b1c04e7c4c7987c0ee7fb6c3b0eb5046 381 Pfam PF00561 alpha/beta hydrolase fold 45 360 1.2E-33 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS09370 b1c04e7c4c7987c0ee7fb6c3b0eb5046 381 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 2 374 48.693 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 JE55_RS09370 b1c04e7c4c7987c0ee7fb6c3b0eb5046 381 PANTHER PTHR32268 2 379 2.0E-169 T 22-04-2016 JE55_RS09370 b1c04e7c4c7987c0ee7fb6c3b0eb5046 381 SUPERFAMILY SSF53474 9 371 3.42E-101 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS09370 b1c04e7c4c7987c0ee7fb6c3b0eb5046 381 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 16 371 6.3E-139 T 22-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 JE55_RS05030 2599830e8f13bcbe87ad40030b51856e 337 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 319 3.5E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05030 2599830e8f13bcbe87ad40030b51856e 337 PANTHER PTHR10366 4 328 7.1E-72 T 22-04-2016 JE55_RS05030 2599830e8f13bcbe87ad40030b51856e 337 SUPERFAMILY SSF51735 1 327 7.06E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05030 2599830e8f13bcbe87ad40030b51856e 337 PANTHER PTHR10366:SF427 4 328 7.1E-72 T 22-04-2016 JE55_RS05030 2599830e8f13bcbe87ad40030b51856e 337 Gene3D G3DSA:3.40.50.720 3 222 8.1E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05030 2599830e8f13bcbe87ad40030b51856e 337 Gene3D G3DSA:3.90.25.10 276 327 1.3E-4 T 22-04-2016 JE55_RS05030 2599830e8f13bcbe87ad40030b51856e 337 Gene3D G3DSA:3.90.25.10 223 239 1.3E-4 T 22-04-2016 JE55_RS13400 e4e5edf5ec1c3543c36d5dd122213aa5 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.485 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 JE55_RS13400 e4e5edf5ec1c3543c36d5dd122213aa5 175 PANTHER PTHR10286 5 166 3.5E-69 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 JE55_RS13400 e4e5edf5ec1c3543c36d5dd122213aa5 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 JE55_RS13400 e4e5edf5ec1c3543c36d5dd122213aa5 175 Gene3D G3DSA:3.90.80.10 3 174 1.3E-59 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 JE55_RS13400 e4e5edf5ec1c3543c36d5dd122213aa5 175 SUPERFAMILY SSF50324 3 175 9.55E-67 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 JE55_RS13400 e4e5edf5ec1c3543c36d5dd122213aa5 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 1.3E-50 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 JE55_RS02120 62164f4ec601b5a4380502461f35be8b 564 Pfam PF02272 DHHA1 domain 377 447 1.5E-10 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 JE55_RS02120 62164f4ec601b5a4380502461f35be8b 564 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 561 4.5E-144 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 JE55_RS02120 62164f4ec601b5a4380502461f35be8b 564 PANTHER PTHR30255:SF2 1 564 4.4E-191 T 22-04-2016 JE55_RS02120 62164f4ec601b5a4380502461f35be8b 564 PANTHER PTHR30255 1 564 4.4E-191 T 22-04-2016 JE55_RS02120 62164f4ec601b5a4380502461f35be8b 564 Pfam PF01368 DHH family 75 205 1.1E-10 T 22-04-2016 IPR001667 DDH domain JE55_RS02120 62164f4ec601b5a4380502461f35be8b 564 SUPERFAMILY SSF64182 48 463 7.46E-116 T 22-04-2016 JE55_RS17475 515d8eea3fae5f2cbb811e638920cf5c 303 Gene3D G3DSA:3.20.20.150 21 292 2.8E-98 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS17475 515d8eea3fae5f2cbb811e638920cf5c 303 Pfam PF05114 Protein of unknown function (DUF692) 23 288 2.1E-101 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 JE55_RS17475 515d8eea3fae5f2cbb811e638920cf5c 303 Hamap MF_00697 UPF0276 protein . 23 296 44.947 T 22-04-2016 IPR007801 Uncharacterised protein family UPF0276 JE55_RS17475 515d8eea3fae5f2cbb811e638920cf5c 303 PANTHER PTHR42194 44 289 1.2E-61 T 22-04-2016 JE55_RS17475 515d8eea3fae5f2cbb811e638920cf5c 303 SUPERFAMILY SSF51658 116 277 2.04E-7 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS17475 515d8eea3fae5f2cbb811e638920cf5c 303 PANTHER PTHR42194:SF1 44 289 1.2E-61 T 22-04-2016 JE55_RS04305 9f0c8e1f6e6e57270fd300a084de819e 226 PIRSF PIRSF009467 2 226 4.0E-61 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 JE55_RS04305 9f0c8e1f6e6e57270fd300a084de819e 226 PANTHER PTHR33620 1 226 1.2E-31 T 22-04-2016 JE55_RS04305 9f0c8e1f6e6e57270fd300a084de819e 226 Pfam PF01730 UreF 37 183 2.4E-37 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 JE55_RS04305 9f0c8e1f6e6e57270fd300a084de819e 226 Hamap MF_01385 Urease accessory protein UreF [ureF]. 5 226 30.599 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 JE55_RS05720 1fa9d1361851c1c91edc0a44a888af0b 468 Gene3D G3DSA:1.20.1250.20 259 436 2.6E-17 T 22-04-2016 JE55_RS05720 1fa9d1361851c1c91edc0a44a888af0b 468 Gene3D G3DSA:1.20.1250.20 14 191 3.8E-14 T 22-04-2016 JE55_RS05720 1fa9d1361851c1c91edc0a44a888af0b 468 SUPERFAMILY SSF103473 7 199 3.14E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS05720 1fa9d1361851c1c91edc0a44a888af0b 468 SUPERFAMILY SSF103473 242 443 3.14E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS05720 1fa9d1361851c1c91edc0a44a888af0b 468 PANTHER PTHR23515:SF4 247 446 9.3E-134 T 22-04-2016 JE55_RS05720 1fa9d1361851c1c91edc0a44a888af0b 468 PANTHER PTHR23515:SF4 5 207 9.3E-134 T 22-04-2016 JE55_RS05720 1fa9d1361851c1c91edc0a44a888af0b 468 Pfam PF07690 Major Facilitator Superfamily 21 400 2.9E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS05720 1fa9d1361851c1c91edc0a44a888af0b 468 PANTHER PTHR23515 247 446 9.3E-134 T 22-04-2016 JE55_RS05720 1fa9d1361851c1c91edc0a44a888af0b 468 PANTHER PTHR23515 5 207 9.3E-134 T 22-04-2016 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 260 274 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 SUPERFAMILY SSF51905 9 294 2.3E-89 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 SUPERFAMILY SSF51905 474 531 2.3E-89 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 Gene3D G3DSA:3.50.50.60 9 131 6.4E-115 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 Gene3D G3DSA:3.50.50.60 192 319 6.4E-115 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 Gene3D G3DSA:3.50.50.60 468 531 6.4E-115 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 PANTHER PTHR11552 11 550 1.6E-196 T 22-04-2016 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 Pfam PF05199 GMC oxidoreductase 391 525 4.1E-39 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 PIRSF PIRSF000137 1 536 1.5E-144 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 Pfam PF00732 GMC oxidoreductase 12 301 6.5E-86 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 SUPERFAMILY SSF54373 296 475 2.65E-48 T 22-04-2016 JE55_RS08880 051698090a69667bf35ed18a0e31b65d 556 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 87 110 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 JE55_RS08685 e3a3b07f4b70b7ec73b8b040b8ec9a2a 476 SUPERFAMILY SSF53067 3 145 3.5E-26 T 22-04-2016 JE55_RS08685 e3a3b07f4b70b7ec73b8b040b8ec9a2a 476 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 6 474 2.6E-152 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 JE55_RS08685 e3a3b07f4b70b7ec73b8b040b8ec9a2a 476 Pfam PF05134 Type II secretion system (T2SS), protein L 19 244 2.1E-26 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain JE55_RS08685 e3a3b07f4b70b7ec73b8b040b8ec9a2a 476 Pfam PF12693 GspL periplasmic domain 331 473 2.6E-20 T 22-04-2016 IPR025691 GspL periplasmic domain JE55_RS10795 b7256b420bbf289aa42b4cd29a98d506 205 PANTHER PTHR12151 50 205 2.1E-51 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC JE55_RS10795 b7256b420bbf289aa42b4cd29a98d506 205 SUPERFAMILY SSF52833 46 205 2.94E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10795 b7256b420bbf289aa42b4cd29a98d506 205 Gene3D G3DSA:3.40.30.10 19 204 3.5E-58 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10795 b7256b420bbf289aa42b4cd29a98d506 205 Pfam PF02630 SCO1/SenC 44 183 2.8E-37 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 Gene3D G3DSA:1.10.601.10 36 78 1.3E-13 T 22-04-2016 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 PRINTS PR00046 Major sigma-70 factor signature 187 199 1.8E-11 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 PRINTS PR00046 Major sigma-70 factor signature 65 73 1.8E-11 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 PRINTS PR00046 Major sigma-70 factor signature 204 219 1.8E-11 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 PRINTS PR00046 Major sigma-70 factor signature 219 230 1.8E-11 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 PRINTS PR00046 Major sigma-70 factor signature 41 54 1.8E-11 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 41 54 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 Pfam PF04542 Sigma-70 region 2 16 86 8.6E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 15 235 6.9E-89 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 PANTHER PTHR30385:SF7 11 238 8.4E-63 T 22-04-2016 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 Pfam PF04539 Sigma-70 region 3 95 147 5.4E-10 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 PANTHER PTHR30385 11 238 8.4E-63 T 22-04-2016 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 3 237 64.009 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 204 230 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 SUPERFAMILY SSF88659 87 160 6.1E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 12 234 3.6E-33 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 Gene3D G3DSA:1.10.10.10 86 133 2.2E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 PIRSF PIRSF000770 1 240 3.2E-37 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 SUPERFAMILY SSF88946 2 86 1.15E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 Gene3D G3DSA:1.10.10.10 171 236 2.4E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 SUPERFAMILY SSF88659 151 238 1.08E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS07880 7007bd743e1acab29e9bfeec9259e610 244 Pfam PF04545 Sigma-70, region 4 183 232 6.8E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS02585 e0c5c3f7f0cab124cd685c694c8ca912 256 SMART SM00382 32 229 2.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS02585 e0c5c3f7f0cab124cd685c694c8ca912 256 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 8 249 2.8E-95 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 JE55_RS02585 e0c5c3f7f0cab124cd685c694c8ca912 256 SUPERFAMILY SSF52540 6 236 1.57E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02585 e0c5c3f7f0cab124cd685c694c8ca912 256 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS02585 e0c5c3f7f0cab124cd685c694c8ca912 256 PANTHER PTHR24220:SF85 9 247 4.3E-83 T 22-04-2016 JE55_RS02585 e0c5c3f7f0cab124cd685c694c8ca912 256 Gene3D G3DSA:3.40.50.300 4 236 2.9E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02585 e0c5c3f7f0cab124cd685c694c8ca912 256 Pfam PF00005 ABC transporter 23 177 1.3E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS02585 e0c5c3f7f0cab124cd685c694c8ca912 256 PANTHER PTHR24220 9 247 4.3E-83 T 22-04-2016 JE55_RS04460 cb16016a3692f0212d2d4c7f26e69361 146 Pfam PF03652 Holliday junction resolvase 10 137 3.1E-37 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 JE55_RS04460 cb16016a3692f0212d2d4c7f26e69361 146 SMART SM00732 9 109 4.7E-30 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 JE55_RS04460 cb16016a3692f0212d2d4c7f26e69361 146 SUPERFAMILY SSF53098 10 138 1.14E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS04460 cb16016a3692f0212d2d4c7f26e69361 146 Gene3D G3DSA:3.30.420.140 10 140 2.6E-42 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 JE55_RS04460 cb16016a3692f0212d2d4c7f26e69361 146 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 9 140 22.551 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 JE55_RS04460 cb16016a3692f0212d2d4c7f26e69361 146 PANTHER PTHR33317 10 145 3.0E-32 T 22-04-2016 JE55_RS04460 cb16016a3692f0212d2d4c7f26e69361 146 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 12 137 2.7E-30 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 JE55_RS05645 8c6a16fec761184df9c3ca66a7559368 352 PANTHER PTHR11647 8 333 1.3E-169 T 22-04-2016 JE55_RS05645 8c6a16fec761184df9c3ca66a7559368 352 SUPERFAMILY SSF51556 8 351 6.35E-148 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS05645 8c6a16fec761184df9c3ca66a7559368 352 Gene3D G3DSA:3.20.20.140 8 351 1.4E-136 T 22-04-2016 JE55_RS05645 8c6a16fec761184df9c3ca66a7559368 352 PANTHER PTHR11647:SF59 8 333 1.3E-169 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS05645 8c6a16fec761184df9c3ca66a7559368 352 ProSitePatterns PS00482 Dihydroorotase signature 1. 16 24 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS05645 8c6a16fec761184df9c3ca66a7559368 352 Hamap MF_00219 Dihydroorotase [pyrC]. 7 352 44.293 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS05645 8c6a16fec761184df9c3ca66a7559368 352 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 9 351 6.9E-142 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS05645 8c6a16fec761184df9c3ca66a7559368 352 PIRSF PIRSF001237 5 352 1.2E-140 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS05645 8c6a16fec761184df9c3ca66a7559368 352 ProSitePatterns PS00483 Dihydroorotase signature 2. 254 265 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS05645 8c6a16fec761184df9c3ca66a7559368 352 Pfam PF01979 Amidohydrolase family 16 318 9.4E-21 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 JE55_RS06240 76120746dd247f71f7856e483321ca85 289 SMART SM00382 84 202 6.4E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS06240 76120746dd247f71f7856e483321ca85 289 Gene3D G3DSA:3.40.50.300 56 222 1.0E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06240 76120746dd247f71f7856e483321ca85 289 PANTHER PTHR13779 29 188 1.4E-78 T 22-04-2016 JE55_RS06240 76120746dd247f71f7856e483321ca85 289 PANTHER PTHR13779 216 285 1.4E-78 T 22-04-2016 JE55_RS06240 76120746dd247f71f7856e483321ca85 289 Pfam PF05673 Protein of unknown function (DUF815) 33 285 2.6E-107 T 22-04-2016 IPR008533 Domain of unknown function DUF815 JE55_RS06240 76120746dd247f71f7856e483321ca85 289 SUPERFAMILY SSF52540 45 193 2.05E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06240 76120746dd247f71f7856e483321ca85 289 PANTHER PTHR13779:SF28 29 188 1.4E-78 T 22-04-2016 JE55_RS06240 76120746dd247f71f7856e483321ca85 289 PANTHER PTHR13779:SF28 216 285 1.4E-78 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 SUPERFAMILY SSF54862 121 258 1.21E-37 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 SMART SM00926 265 319 3.2E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 PANTHER PTHR11615 567 965 1.1E-237 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 PANTHER PTHR11615 49 97 1.1E-237 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 PANTHER PTHR11615 263 522 1.1E-237 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 875 902 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 SUPERFAMILY SSF53706 265 791 8.38E-192 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Gene3D G3DSA:2.20.25.90 267 320 1.0E-17 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 46 122 1.3E-24 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Pfam PF00384 Molybdopterin oxidoreductase 322 739 4.2E-75 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 270 945 5.5E-280 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 267 317 7.2E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 PANTHER PTHR11615:SF112 567 965 1.1E-237 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 PANTHER PTHR11615:SF112 49 97 1.1E-237 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 PANTHER PTHR11615:SF112 263 522 1.1E-237 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 SUPERFAMILY SSF50692 804 946 9.04E-42 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 PIRSF PIRSF036643 43 978 0.0 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Gene3D G3DSA:3.40.50.740 592 794 1.1E-88 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Gene3D G3DSA:3.40.50.740 322 399 1.1E-88 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Gene3D G3DSA:3.30.70.20 180 252 2.9E-14 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 SMART SM00929 129 169 5.8E-20 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 SUPERFAMILY SSF54292 48 120 3.99E-19 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Gene3D G3DSA:3.10.20.30 42 101 1.2E-8 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Pfam PF00037 4Fe-4S binding domain 236 251 1.1E-4 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 129 168 2.9E-17 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 195 206 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 238 249 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Gene3D G3DSA:3.40.228.10 400 591 9.8E-57 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Gene3D G3DSA:2.40.40.20 795 948 7.0E-43 T 22-04-2016 JE55_RS03670 f797d20fd0df5723885bf0038e2b89ee 984 Pfam PF01568 Molydopterin dinucleotide binding domain 837 941 2.5E-28 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 JE55_RS06230 6ec673349b8ab7d306f12038eb4b5214 67 SUPERFAMILY SSF57716 2 58 1.41E-20 T 22-04-2016 JE55_RS06230 6ec673349b8ab7d306f12038eb4b5214 67 Gene3D G3DSA:3.30.50.10 2 58 2.1E-25 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 JE55_RS06230 6ec673349b8ab7d306f12038eb4b5214 67 Pfam PF03884 Domain of unknown function (DUF329) 5 52 2.5E-24 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 JE55_RS06230 6ec673349b8ab7d306f12038eb4b5214 67 PANTHER PTHR36150:SF1 1 62 5.3E-19 T 22-04-2016 JE55_RS06230 6ec673349b8ab7d306f12038eb4b5214 67 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 1 58 18.789 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 JE55_RS06230 6ec673349b8ab7d306f12038eb4b5214 67 PANTHER PTHR36150 1 62 5.3E-19 T 22-04-2016 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 Gene3D G3DSA:2.40.50.140 657 737 2.3E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 PANTHER PTHR23355 611 755 1.0E-234 T 22-04-2016 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 PANTHER PTHR23355 2 578 1.0E-234 T 22-04-2016 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 SUPERFAMILY SSF50249 615 655 3.32E-142 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 SUPERFAMILY SSF50249 175 490 3.32E-142 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 SUPERFAMILY SSF50249 526 581 3.32E-142 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 SMART SM00357 75 134 8.4E-13 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 SMART SM00955 248 580 9.3E-183 T 22-04-2016 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 SUPERFAMILY SSF50249 56 136 3.38E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 Pfam PF00773 RNB domain 248 579 1.3E-103 T 22-04-2016 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 Pfam PF00575 S1 RNA binding domain 654 735 7.7E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 TIGRFAM TIGR02063 RNase_R: ribonuclease R 9 738 5.9E-250 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 Pfam PF08206 Ribonuclease B OB domain 76 133 1.5E-23 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 SUPERFAMILY SSF50249 657 737 2.26E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 ProSitePatterns PS01175 Ribonuclease II family signature. 547 571 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 Hamap MF_01895 Ribonuclease R [rnr]. 27 738 56.325 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 SMART SM00316 69 131 11.0 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 SMART SM00316 655 738 2.1E-11 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 PANTHER PTHR23355:SF9 611 755 1.0E-234 T 22-04-2016 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 PANTHER PTHR23355:SF9 2 578 1.0E-234 T 22-04-2016 JE55_RS16555 28c08b2339da93747d30c0fe15c1c2c8 812 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 65 738 6.8E-213 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 JE55_RS16685 c280488b119c377f81f81f96a77152b4 339 PANTHER PTHR11082 8 309 1.3E-147 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JE55_RS16685 c280488b119c377f81f81f96a77152b4 339 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 10 321 7.9E-136 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 JE55_RS16685 c280488b119c377f81f81f96a77152b4 339 SUPERFAMILY SSF51395 11 310 4.44E-74 T 22-04-2016 JE55_RS16685 c280488b119c377f81f81f96a77152b4 339 Gene3D G3DSA:3.20.20.70 9 253 1.0E-79 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS16685 c280488b119c377f81f81f96a77152b4 339 PANTHER PTHR11082:SF29 8 309 1.3E-147 T 22-04-2016 JE55_RS16685 c280488b119c377f81f81f96a77152b4 339 Pfam PF01207 Dihydrouridine synthase (Dus) 14 311 1.4E-81 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JE55_RS16685 c280488b119c377f81f81f96a77152b4 339 PIRSF PIRSF006621 1 326 3.2E-79 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JE55_RS16685 c280488b119c377f81f81f96a77152b4 339 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 93 111 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 JE55_RS16685 c280488b119c377f81f81f96a77152b4 339 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 6 327 51.134 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 JE55_RS17890 82febc1f37430fee289a2d915ae186e2 246 PIRSF PIRSF006648 1 246 4.8E-39 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS17890 82febc1f37430fee289a2d915ae186e2 246 PANTHER PTHR30294 1 239 2.9E-31 T 22-04-2016 JE55_RS17890 82febc1f37430fee289a2d915ae186e2 246 PRINTS PR00164 ABC-2 type transport system membrane protein signature 169 188 4.8E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS17890 82febc1f37430fee289a2d915ae186e2 246 PRINTS PR00164 ABC-2 type transport system membrane protein signature 22 43 4.8E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS17890 82febc1f37430fee289a2d915ae186e2 246 PRINTS PR00164 ABC-2 type transport system membrane protein signature 132 156 4.8E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS17890 82febc1f37430fee289a2d915ae186e2 246 PRINTS PR00164 ABC-2 type transport system membrane protein signature 189 208 4.8E-13 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS17890 82febc1f37430fee289a2d915ae186e2 246 Pfam PF01061 ABC-2 type transporter 4 211 3.1E-29 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 SUPERFAMILY SSF53067 294 415 6.74E-24 T 22-04-2016 JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 SUPERFAMILY SSF53067 177 244 6.74E-24 T 22-04-2016 JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 Gene3D G3DSA:3.30.420.40 4 69 9.7E-26 T 22-04-2016 JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 Gene3D G3DSA:3.30.420.40 103 186 9.7E-26 T 22-04-2016 JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 PANTHER PTHR19375:SF182 286 412 4.1E-66 T 22-04-2016 JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 PANTHER PTHR19375:SF182 1 238 4.1E-66 T 22-04-2016 JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 Pfam PF00012 Hsp70 protein 93 199 7.3E-11 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 Gene3D G3DSA:3.30.420.40 354 394 6.3E-9 T 22-04-2016 JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 Gene3D G3DSA:3.30.420.40 187 223 6.3E-9 T 22-04-2016 JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 PANTHER PTHR19375 286 412 4.1E-66 T 22-04-2016 JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 PANTHER PTHR19375 1 238 4.1E-66 T 22-04-2016 JE55_RS06640 424c615fa8ef22f6a4745b50cc0b5d84 420 SUPERFAMILY SSF53067 2 172 1.55E-27 T 22-04-2016 JE55_RS15685 91c9f577115132f609e9b614854e6639 110 PANTHER PTHR32305:SF7 2 108 5.4E-12 T 22-04-2016 JE55_RS15685 91c9f577115132f609e9b614854e6639 110 PANTHER PTHR32305 2 108 5.4E-12 T 22-04-2016 JE55_RS15685 91c9f577115132f609e9b614854e6639 110 Pfam PF05954 Phage late control gene D protein (GPD) 13 110 6.9E-26 T 22-04-2016 JE55_RS15685 91c9f577115132f609e9b614854e6639 110 SUPERFAMILY SSF69279 3 110 3.57E-28 T 22-04-2016 JE55_RS01255 c563aff508e6e793c1ed474ca234d8ca 275 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 274 7.0E-146 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 JE55_RS01255 c563aff508e6e793c1ed474ca234d8ca 275 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 JE55_RS01255 c563aff508e6e793c1ed474ca234d8ca 275 Gene3D G3DSA:1.10.166.10 2 70 1.7E-32 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 JE55_RS01255 c563aff508e6e793c1ed474ca234d8ca 275 Gene3D G3DSA:2.160.10.10 91 257 1.6E-60 T 22-04-2016 JE55_RS01255 c563aff508e6e793c1ed474ca234d8ca 275 PANTHER PTHR19136 15 273 1.6E-126 T 22-04-2016 JE55_RS01255 c563aff508e6e793c1ed474ca234d8ca 275 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 274 56.605 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 JE55_RS01255 c563aff508e6e793c1ed474ca234d8ca 275 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 177 211 1.1E-13 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS01255 c563aff508e6e793c1ed474ca234d8ca 275 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 135 168 0.002 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS01255 c563aff508e6e793c1ed474ca234d8ca 275 SUPERFAMILY SSF51161 4 258 1.04E-74 T 22-04-2016 IPR011004 Trimeric LpxA-like JE55_RS01255 c563aff508e6e793c1ed474ca234d8ca 275 PANTHER PTHR19136:SF52 15 273 1.6E-126 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 JE55_RS01255 c563aff508e6e793c1ed474ca234d8ca 275 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 70 2.2E-26 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 JE55_RS16515 c4f6196493d1048fcdb0aad66b67e666 184 SUPERFAMILY SSF55729 11 168 5.12E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS16515 c4f6196493d1048fcdb0aad66b67e666 184 Gene3D G3DSA:3.40.630.30 9 175 2.6E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS16515 c4f6196493d1048fcdb0aad66b67e666 184 PANTHER PTHR13256:SF10 12 166 2.5E-33 T 22-04-2016 JE55_RS16515 c4f6196493d1048fcdb0aad66b67e666 184 Pfam PF13302 Acetyltransferase (GNAT) domain 18 159 4.1E-29 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS16515 c4f6196493d1048fcdb0aad66b67e666 184 PANTHER PTHR13256 12 166 2.5E-33 T 22-04-2016 JE55_RS16705 7141451e9688a016d555668021236511 145 PANTHER PTHR12418:SF25 6 144 5.8E-32 T 22-04-2016 JE55_RS16705 7141451e9688a016d555668021236511 145 Gene3D G3DSA:3.10.129.10 6 144 1.7E-56 T 22-04-2016 IPR029069 HotDog domain JE55_RS16705 7141451e9688a016d555668021236511 145 PANTHER PTHR12418 6 144 5.8E-32 T 22-04-2016 JE55_RS16705 7141451e9688a016d555668021236511 145 SUPERFAMILY SSF54637 4 140 7.79E-35 T 22-04-2016 IPR029069 HotDog domain JE55_RS16705 7141451e9688a016d555668021236511 145 Pfam PF03061 Thioesterase superfamily 56 133 6.1E-12 T 22-04-2016 IPR006683 Thioesterase domain JE55_RS16705 7141451e9688a016d555668021236511 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 27 140 1.8E-18 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain JE55_RS17995 da4ea562b207c3fed43a713686bc2cde 206 Pfam PF13671 AAA domain 4 162 9.3E-30 T 22-04-2016 JE55_RS17995 da4ea562b207c3fed43a713686bc2cde 206 Gene3D G3DSA:3.40.50.300 4 190 2.0E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17995 da4ea562b207c3fed43a713686bc2cde 206 SUPERFAMILY SSF52540 4 177 4.51E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 Gene3D G3DSA:1.10.1050.10 2 99 2.3E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 207 35.156 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 207 6.8E-79 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 SUPERFAMILY SSF55174 2 207 1.57E-67 T 22-04-2016 JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 SMART SM00363 97 161 4.2E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 Pfam PF01479 S4 domain 98 144 1.2E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 PANTHER PTHR11831 1 207 1.1E-88 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 PANTHER PTHR11831:SF4 1 207 1.1E-88 T 22-04-2016 JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 SMART SM01390 3 96 2.8E-46 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 1.6E-30 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 JE55_RS07260 97923faf06c99754d8ae4f1fa4f1f82b 207 Gene3D G3DSA:3.10.290.10 100 198 1.3E-33 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS03630 1a04ea9ffe31d56ed7a7920a414df167 224 PANTHER PTHR30128:SF16 75 220 1.9E-37 T 22-04-2016 JE55_RS03630 1a04ea9ffe31d56ed7a7920a414df167 224 PANTHER PTHR30128 75 220 1.9E-37 T 22-04-2016 JE55_RS03630 1a04ea9ffe31d56ed7a7920a414df167 224 PRINTS PR01022 Outer membrane protein A signature 156 175 3.0E-10 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 JE55_RS03630 1a04ea9ffe31d56ed7a7920a414df167 224 PRINTS PR01022 Outer membrane protein A signature 189 202 3.0E-10 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 JE55_RS03630 1a04ea9ffe31d56ed7a7920a414df167 224 PRINTS PR01022 Outer membrane protein A signature 90 105 3.0E-10 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 JE55_RS03630 1a04ea9ffe31d56ed7a7920a414df167 224 Gene3D G3DSA:3.30.1330.60 88 211 3.4E-38 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS03630 1a04ea9ffe31d56ed7a7920a414df167 224 Pfam PF00691 OmpA family 101 193 7.3E-23 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS03630 1a04ea9ffe31d56ed7a7920a414df167 224 PRINTS PR01021 OMPA domain signature 147 163 2.4E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS03630 1a04ea9ffe31d56ed7a7920a414df167 224 PRINTS PR01021 OMPA domain signature 132 147 2.4E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS03630 1a04ea9ffe31d56ed7a7920a414df167 224 PRINTS PR01021 OMPA domain signature 102 124 2.4E-20 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS03630 1a04ea9ffe31d56ed7a7920a414df167 224 SUPERFAMILY SSF103088 91 210 1.05E-34 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 PANTHER PTHR19370:SF93 6 270 3.3E-70 T 22-04-2016 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 Gene3D G3DSA:2.40.30.10 5 99 7.3E-25 T 22-04-2016 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 Pfam PF00175 Oxidoreductase NAD-binding domain 125 232 3.9E-15 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 PANTHER PTHR19370 6 270 3.3E-70 T 22-04-2016 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 PRINTS PR00406 Cytochrome B5 reductase signature 122 141 1.6E-9 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 PRINTS PR00406 Cytochrome B5 reductase signature 159 170 1.6E-9 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 PRINTS PR00406 Cytochrome B5 reductase signature 97 111 1.6E-9 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 PRINTS PR00406 Cytochrome B5 reductase signature 218 226 1.6E-9 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 6 360 6.1E-141 T 22-04-2016 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00930 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 SUPERFAMILY SSF54292 240 358 5.79E-27 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 Gene3D G3DSA:3.10.20.30 245 361 3.7E-31 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 SUPERFAMILY SSF63380 3 111 1.4E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 Pfam PF00970 Oxidoreductase FAD-binding domain 15 109 7.0E-12 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 277 350 1.4E-13 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 Gene3D G3DSA:3.40.50.80 100 244 3.4E-37 T 22-04-2016 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 SUPERFAMILY SSF52343 100 248 1.22E-34 T 22-04-2016 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 122 141 4.6E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 147 156 4.6E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 218 226 4.6E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS07540 aaa023b52b043fef51a1cab769508b0e 362 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 159 170 4.6E-6 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS05105 a3103a989050d4e382a179219164cce1 275 PANTHER PTHR30221 3 260 1.4E-104 T 22-04-2016 JE55_RS05105 a3103a989050d4e382a179219164cce1 275 Pfam PF00924 Mechanosensitive ion channel 63 256 6.6E-39 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JE55_RS05105 a3103a989050d4e382a179219164cce1 275 SUPERFAMILY SSF50182 105 170 6.21E-15 T 22-04-2016 IPR010920 LSM domain JE55_RS05105 a3103a989050d4e382a179219164cce1 275 Gene3D G3DSA:3.30.70.100 173 256 1.4E-12 T 22-04-2016 JE55_RS05105 a3103a989050d4e382a179219164cce1 275 SUPERFAMILY SSF82689 173 260 4.71E-17 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 JE55_RS05105 a3103a989050d4e382a179219164cce1 275 SUPERFAMILY SSF82861 18 100 3.92E-13 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 JE55_RS05105 a3103a989050d4e382a179219164cce1 275 Gene3D G3DSA:2.30.30.60 120 169 8.1E-16 T 22-04-2016 JE55_RS05105 a3103a989050d4e382a179219164cce1 275 PANTHER PTHR30221:SF3 3 260 1.4E-104 T 22-04-2016 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 8 768 26.017 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 PIRSF PIRSF006076 2 768 2.5E-253 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 Gene3D G3DSA:2.40.160.50 419 764 6.9E-27 T 22-04-2016 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 Pfam PF01103 Surface antigen 454 768 1.7E-75 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 30 768 6.6E-271 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 Pfam PF07244 Surface antigen variable number repeat 272 349 3.1E-13 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 Pfam PF07244 Surface antigen variable number repeat 182 269 7.3E-20 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 Pfam PF07244 Surface antigen variable number repeat 99 178 3.0E-12 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 Pfam PF07244 Surface antigen variable number repeat 31 96 3.7E-6 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 Pfam PF07244 Surface antigen variable number repeat 353 426 7.2E-13 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 PANTHER PTHR12815 11 768 4.3E-235 T 22-04-2016 JE55_RS01155 1b18201d6669e34581718d3bc7bcdf1b 768 PANTHER PTHR12815:SF11 11 768 4.3E-235 T 22-04-2016 JE55_RS10080 0459d92223b10246fe6ed71835278d85 320 Gene3D G3DSA:3.40.190.10 181 262 1.5E-5 T 22-04-2016 JE55_RS10080 0459d92223b10246fe6ed71835278d85 320 Gene3D G3DSA:1.10.10.10 3 85 6.4E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10080 0459d92223b10246fe6ed71835278d85 320 SUPERFAMILY SSF53850 90 297 9.46E-44 T 22-04-2016 JE55_RS10080 0459d92223b10246fe6ed71835278d85 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 4.5E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS10080 0459d92223b10246fe6ed71835278d85 320 Pfam PF03466 LysR substrate binding domain 90 295 4.2E-45 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS10080 0459d92223b10246fe6ed71835278d85 320 PANTHER PTHR30537 1 314 2.3E-101 T 22-04-2016 JE55_RS10080 0459d92223b10246fe6ed71835278d85 320 Gene3D G3DSA:3.40.190.10 92 180 9.2E-21 T 22-04-2016 JE55_RS10080 0459d92223b10246fe6ed71835278d85 320 SUPERFAMILY SSF46785 6 111 1.36E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10080 0459d92223b10246fe6ed71835278d85 320 PANTHER PTHR30537:SF5 1 314 2.3E-101 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:3.40.50.980 726 888 6.5E-39 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:3.40.50.980 2292 2443 4.2E-42 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Pfam PF13745 HxxPF-repeated domain 434 523 1.9E-19 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SUPERFAMILY SSF52777 1181 1380 5.45E-23 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 PANTHER PTHR24095 1626 2625 0.0 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 PANTHER PTHR24095 105 1156 0.0 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Pfam PF00550 Phosphopantetheine attachment site 1103 1165 6.7E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Pfam PF00550 Phosphopantetheine attachment site 2656 2715 1.7E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SMART SM01294 2655 2715 0.0012 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:3.40.50.1820 2728 2844 7.6E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:3.40.50.1820 2908 2959 7.6E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SMART SM00823 Phosphopantetheine attachment site 1101 1169 0.0012 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SMART SM00823 Phosphopantetheine attachment site 2654 2719 8.8E-4 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:3.40.50.980 2134 2291 3.6E-41 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SUPERFAMILY SSF52777 1369 1636 1.56E-33 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SUPERFAMILY SSF53474 2681 2967 3.51E-21 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SUPERFAMILY SSF47336 1094 1165 2.36E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2282 2293 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 ProSitePatterns PS00455 Putative AMP-binding domain signature. 719 730 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Pfam PF00501 AMP-binding enzyme 578 979 3.8E-87 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Pfam PF00501 AMP-binding enzyme 2139 2545 2.6E-80 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Pfam PF00668 Condensation domain 109 412 1.2E-52 T 22-04-2016 IPR001242 Condensation domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Pfam PF00668 Condensation domain 1180 1491 5.8E-38 T 22-04-2016 IPR001242 Condensation domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Pfam PF00668 Condensation domain 1669 1969 2.6E-55 T 22-04-2016 IPR001242 Condensation domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SUPERFAMILY SSF56801 535 1114 1.44E-145 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1125 1140 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:1.10.1200.10 1106 1170 1.7E-24 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:1.10.1200.10 2659 2719 1.2E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 PANTHER PTHR24095:SF173 1626 2625 0.0 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 PANTHER PTHR24095:SF173 105 1156 0.0 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SUPERFAMILY SSF56801 2132 2666 1.05E-137 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:3.30.300.30 974 1105 8.1E-34 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:3.30.300.30 2541 2658 9.0E-30 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:2.30.38.10 2453 2534 2.1E-21 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:2.30.38.10 889 969 1.4E-27 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SUPERFAMILY SSF52777 299 565 4.67E-53 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 599 1003 6.9E-127 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2159 2569 5.5E-116 T 22-04-2016 IPR010071 Amino acid adenylation domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Pfam PF13193 AMP-binding enzyme C-terminal domain 987 1071 2.1E-11 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Pfam PF13193 AMP-binding enzyme C-terminal domain 2553 2625 2.7E-9 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SUPERFAMILY SSF52777 1674 1851 2.52E-41 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 1506 1659 1.5E-33 T 22-04-2016 IPR010060 Non-ribosomal peptide synthase JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SUPERFAMILY SSF52777 114 293 3.0E-35 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 Gene3D G3DSA:3.40.50.980 574 725 1.6E-40 T 22-04-2016 JE55_RS01595 81109834d793015c5a65dc0b7821bf6b 2979 SUPERFAMILY SSF52777 1855 2094 1.89E-49 T 22-04-2016 JE55_RS13205 e89733cffe282b99124abab1bd6cb9b1 310 PANTHER PTHR30535 35 300 6.4E-57 T 22-04-2016 JE55_RS13205 e89733cffe282b99124abab1bd6cb9b1 310 Gene3D G3DSA:3.40.50.1980 170 300 6.3E-36 T 22-04-2016 JE55_RS13205 e89733cffe282b99124abab1bd6cb9b1 310 Pfam PF01497 Periplasmic binding protein 52 279 9.0E-28 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 JE55_RS13205 e89733cffe282b99124abab1bd6cb9b1 310 SUPERFAMILY SSF53807 28 298 1.02E-64 T 22-04-2016 JE55_RS13205 e89733cffe282b99124abab1bd6cb9b1 310 Gene3D G3DSA:3.40.50.1980 49 167 7.6E-32 T 22-04-2016 JE55_RS11740 feaf517363b931bf91a6558e4d9bd7e4 210 PANTHER PTHR12192:SF9 17 206 2.7E-49 T 22-04-2016 JE55_RS11740 feaf517363b931bf91a6558e4d9bd7e4 210 Gene3D G3DSA:3.10.490.10 40 204 5.8E-25 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like JE55_RS11740 feaf517363b931bf91a6558e4d9bd7e4 210 Pfam PF04752 ChaC-like protein 43 207 2.6E-38 T 22-04-2016 IPR006840 ChaC-like protein JE55_RS11740 feaf517363b931bf91a6558e4d9bd7e4 210 PANTHER PTHR12192 17 206 2.7E-49 T 22-04-2016 IPR006840 ChaC-like protein JE55_RS11740 feaf517363b931bf91a6558e4d9bd7e4 210 SUPERFAMILY SSF110857 43 159 1.67E-9 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like JE55_RS12245 ea5f89652d2a99011fe7497cab00b938 346 PANTHER PTHR30160 1 342 8.9E-82 T 22-04-2016 JE55_RS12245 ea5f89652d2a99011fe7497cab00b938 346 PANTHER PTHR30160:SF7 1 342 8.9E-82 T 22-04-2016 JE55_RS12245 ea5f89652d2a99011fe7497cab00b938 346 SUPERFAMILY SSF53756 2 342 1.57E-99 T 22-04-2016 JE55_RS12245 ea5f89652d2a99011fe7497cab00b938 346 Gene3D G3DSA:3.40.50.2000 170 342 3.6E-58 T 22-04-2016 JE55_RS12245 ea5f89652d2a99011fe7497cab00b938 346 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 323 1.6E-64 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 JE55_RS12245 ea5f89652d2a99011fe7497cab00b938 346 Gene3D G3DSA:3.40.50.2000 3 152 4.2E-50 T 22-04-2016 JE55_RS12245 ea5f89652d2a99011fe7497cab00b938 346 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 342 8.9E-152 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 JE55_RS16675 ee748d1488ad9b43a4d150de12e9f00a 493 PANTHER PTHR33408 3 489 5.3E-34 T 22-04-2016 JE55_RS16675 ee748d1488ad9b43a4d150de12e9f00a 493 Pfam PF05598 Transposase domain (DUF772) 58 134 2.4E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal JE55_RS16675 ee748d1488ad9b43a4d150de12e9f00a 493 Pfam PF13751 Transposase DDE domain 331 449 1.6E-28 T 22-04-2016 IPR025668 Transposase DDE domain JE55_RS08400 9ad52ef7a6834f8d4dea02dcf42ada90 113 Gene3D G3DSA:3.40.50.720 13 112 7.2E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS08400 9ad52ef7a6834f8d4dea02dcf42ada90 113 Pfam PF13380 CoA binding domain 13 108 7.3E-23 T 22-04-2016 IPR003781 CoA-binding GO:0048037 JE55_RS08400 9ad52ef7a6834f8d4dea02dcf42ada90 113 SUPERFAMILY SSF51735 8 110 7.22E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS08400 9ad52ef7a6834f8d4dea02dcf42ada90 113 PANTHER PTHR33303 13 113 3.2E-23 T 22-04-2016 JE55_RS03920 d74ca427d46cf2d312f5aa3cb5c78c97 437 ProSitePatterns PS00216 Sugar transport proteins signature 1. 305 322 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS03920 d74ca427d46cf2d312f5aa3cb5c78c97 437 Pfam PF07690 Major Facilitator Superfamily 286 432 7.7E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS03920 d74ca427d46cf2d312f5aa3cb5c78c97 437 SUPERFAMILY SSF103473 11 434 4.58E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS03920 d74ca427d46cf2d312f5aa3cb5c78c97 437 PANTHER PTHR23508:SF16 22 437 3.0E-202 T 22-04-2016 JE55_RS03920 d74ca427d46cf2d312f5aa3cb5c78c97 437 PANTHER PTHR23508 22 437 3.0E-202 T 22-04-2016 JE55_RS03920 d74ca427d46cf2d312f5aa3cb5c78c97 437 Pfam PF00083 Sugar (and other) transporter 26 236 8.9E-25 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JE55_RS03920 d74ca427d46cf2d312f5aa3cb5c78c97 437 Gene3D G3DSA:1.20.1250.20 22 226 1.5E-21 T 22-04-2016 JE55_RS03920 d74ca427d46cf2d312f5aa3cb5c78c97 437 Gene3D G3DSA:1.20.1250.20 249 433 3.4E-20 T 22-04-2016 JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 Gene3D G3DSA:2.30.130.10 1 71 1.2E-26 T 22-04-2016 IPR015947 PUA-like domain JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 SUPERFAMILY SSF88697 1 71 3.73E-18 T 22-04-2016 IPR015947 PUA-like domain JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 SUPERFAMILY SSF53335 150 421 9.26E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 SUPERFAMILY SSF53335 78 117 9.26E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 Gene3D G3DSA:3.40.50.150 214 424 2.4E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 SMART SM00359 2 87 2.8E-15 T 22-04-2016 IPR002478 PUA domain GO:0003723 JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 PANTHER PTHR11061:SF12 3 117 2.9E-105 T 22-04-2016 JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 PANTHER PTHR11061:SF12 136 424 2.9E-105 T 22-04-2016 JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 PANTHER PTHR11061 3 117 2.9E-105 T 22-04-2016 JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 PANTHER PTHR11061 136 424 2.9E-105 T 22-04-2016 JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 199 378 1.4E-26 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 Gene3D G3DSA:3.30.750.80 150 209 1.0E-40 T 22-04-2016 JE55_RS09425 0ac650b949d8c0a73b2dd45376af5b4c 425 Gene3D G3DSA:3.30.750.80 72 117 1.0E-40 T 22-04-2016 JE55_RS11610 5a844900677b0f69364ba7bbfa7ea18a 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.8E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS11610 5a844900677b0f69364ba7bbfa7ea18a 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.8E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS11610 5a844900677b0f69364ba7bbfa7ea18a 199 SUPERFAMILY SSF46689 2 68 6.67E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS11610 5a844900677b0f69364ba7bbfa7ea18a 199 SUPERFAMILY SSF48498 77 190 1.78E-23 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS11610 5a844900677b0f69364ba7bbfa7ea18a 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 3.1E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS11610 5a844900677b0f69364ba7bbfa7ea18a 199 Gene3D G3DSA:1.10.357.10 57 194 1.7E-55 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS11610 5a844900677b0f69364ba7bbfa7ea18a 199 PANTHER PTHR30328 4 199 9.3E-27 T 22-04-2016 JE55_RS11610 5a844900677b0f69364ba7bbfa7ea18a 199 Gene3D G3DSA:1.10.10.60 2 56 1.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS11610 5a844900677b0f69364ba7bbfa7ea18a 199 PANTHER PTHR30328:SF19 4 199 9.3E-27 T 22-04-2016 JE55_RS06820 7c906669f7cc8b7afca6975fbd218b03 108 PANTHER PTHR35862:SF1 3 107 8.2E-29 T 22-04-2016 JE55_RS06820 7c906669f7cc8b7afca6975fbd218b03 108 PANTHER PTHR35862 3 107 8.2E-29 T 22-04-2016 JE55_RS07115 a315e4df74eee53a7ea10722f0a9ab66 237 PANTHER PTHR34322 2 191 2.0E-25 T 22-04-2016 JE55_RS07115 a315e4df74eee53a7ea10722f0a9ab66 237 SMART SM01321 9 124 1.2E-29 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 JE55_RS07115 a315e4df74eee53a7ea10722f0a9ab66 237 Gene3D G3DSA:3.30.70.1290 11 111 5.8E-5 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 JE55_RS07115 a315e4df74eee53a7ea10722f0a9ab66 237 SUPERFAMILY SSF143422 3 127 6.41E-23 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 JE55_RS07115 a315e4df74eee53a7ea10722f0a9ab66 237 Pfam PF01797 Transposase IS200 like 14 111 5.3E-8 T 22-04-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 JE55_RS07115 a315e4df74eee53a7ea10722f0a9ab66 237 PANTHER PTHR34322:SF1 2 191 2.0E-25 T 22-04-2016 JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 231 3.9E-54 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 Pfam PF00230 Major intrinsic protein 4 231 7.3E-44 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 Gene3D G3DSA:1.20.1080.10 3 236 5.3E-82 T 22-04-2016 IPR023271 Aquaporin-like JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 PANTHER PTHR19139 1 231 5.1E-85 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 SUPERFAMILY SSF81338 2 237 4.71E-66 T 22-04-2016 IPR023271 Aquaporin-like JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 PRINTS PR00783 Major intrinsic protein family signature 81 100 4.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 PRINTS PR00783 Major intrinsic protein family signature 2 21 4.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 PRINTS PR00783 Major intrinsic protein family signature 167 189 4.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 PRINTS PR00783 Major intrinsic protein family signature 44 68 4.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 PRINTS PR00783 Major intrinsic protein family signature 214 234 4.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 PRINTS PR00783 Major intrinsic protein family signature 136 154 4.3E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS11815 7584702c52e6a4848aecaa573634a0eb 238 PANTHER PTHR19139:SF147 1 231 5.1E-85 T 22-04-2016 JE55_RS00375 e513b2eaa077f43d137cbb123af590d7 315 SUPERFAMILY SSF50486 204 294 5.65E-20 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 JE55_RS00375 e513b2eaa077f43d137cbb123af590d7 315 Gene3D G3DSA:3.40.50.170 4 200 1.2E-48 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS00375 e513b2eaa077f43d137cbb123af590d7 315 Pfam PF00551 Formyl transferase 25 179 8.2E-26 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS00375 e513b2eaa077f43d137cbb123af590d7 315 Pfam PF02911 Formyl transferase, C-terminal domain 204 292 3.6E-15 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS00375 e513b2eaa077f43d137cbb123af590d7 315 PANTHER PTHR11138 4 292 5.9E-54 T 22-04-2016 JE55_RS00375 e513b2eaa077f43d137cbb123af590d7 315 Gene3D G3DSA:3.10.25.10 206 292 8.2E-19 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS00375 e513b2eaa077f43d137cbb123af590d7 315 SUPERFAMILY SSF53328 5 204 7.85E-53 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 Gene3D G3DSA:1.10.10.10 159 213 2.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 PANTHER PTHR26402:SF474 149 212 3.5E-19 T 22-04-2016 JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 PANTHER PTHR26402:SF474 1 130 3.5E-19 T 22-04-2016 JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 4.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 4.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 4.1E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 PANTHER PTHR26402 149 212 3.5E-19 T 22-04-2016 JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 PANTHER PTHR26402 1 130 3.5E-19 T 22-04-2016 JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 SUPERFAMILY SSF46894 146 214 5.44E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 Pfam PF06490 Flagellar regulatory protein FleQ 4 99 4.2E-5 T 22-04-2016 IPR010518 Flagellar regulatory FleQ JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 211 4.5E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 Gene3D G3DSA:3.40.50.2300 1 125 4.7E-10 T 22-04-2016 JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 SUPERFAMILY SSF52172 1 122 1.43E-13 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS14565 d5f3f2e98e09a6862285d8e285fded9a 279 SMART SM00421 156 213 1.7E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS21405 ffe458e6910a3aaf07f7fd2488da8767 357 Gene3D G3DSA:1.20.200.10 237 356 3.4E-45 T 22-04-2016 JE55_RS21405 ffe458e6910a3aaf07f7fd2488da8767 357 SUPERFAMILY SSF48557 102 357 2.67E-87 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 JE55_RS21405 ffe458e6910a3aaf07f7fd2488da8767 357 PRINTS PR00149 Fumarate lyase superfamily signature 232 250 4.6E-15 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS21405 ffe458e6910a3aaf07f7fd2488da8767 357 PRINTS PR00149 Fumarate lyase superfamily signature 278 296 4.6E-15 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS21405 ffe458e6910a3aaf07f7fd2488da8767 357 Gene3D G3DSA:1.10.275.10 101 236 2.6E-61 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal JE55_RS21405 ffe458e6910a3aaf07f7fd2488da8767 357 PANTHER PTHR11444 90 357 6.3E-141 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS21405 ffe458e6910a3aaf07f7fd2488da8767 357 PANTHER PTHR11444:SF1 90 357 6.3E-141 T 22-04-2016 JE55_RS21405 ffe458e6910a3aaf07f7fd2488da8767 357 Pfam PF00206 Lyase 110 355 2.8E-78 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 Gene3D G3DSA:3.40.47.10 282 399 1.3E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 Gene3D G3DSA:3.40.47.10 153 199 1.3E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 PIRSF PIRSF000429 1 400 7.0E-129 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 Pfam PF02803 Thiolase, C-terminal domain 277 399 3.8E-42 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 Pfam PF00108 Thiolase, N-terminal domain 7 267 2.1E-73 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 PANTHER PTHR18919:SF91 1 400 5.2E-230 T 22-04-2016 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 398 4.4E-134 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 Gene3D G3DSA:3.40.47.10 200 281 9.3E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 Gene3D G3DSA:3.40.47.10 4 125 9.3E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 PANTHER PTHR18919 1 400 5.2E-230 T 22-04-2016 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 SUPERFAMILY SSF53901 4 275 7.85E-79 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 SUPERFAMILY SSF53901 277 399 5.41E-45 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 JE55_RS06405 5918cda73cb290ed6c1672510db0d42d 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 1.6E-223 T 22-04-2016 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 SUPERFAMILY SSF52540 13 277 2.82E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 ProSitePatterns PS00321 recA signature. 223 231 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 PRINTS PR00142 RecA protein signature 307 324 6.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 PRINTS PR00142 RecA protein signature 137 166 6.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 PRINTS PR00142 RecA protein signature 253 282 6.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 PRINTS PR00142 RecA protein signature 220 248 6.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 PRINTS PR00142 RecA protein signature 175 204 6.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 PRINTS PR00142 RecA protein signature 103 132 6.4E-86 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 Pfam PF00154 recA bacterial DNA recombination protein 16 278 7.7E-145 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 SUPERFAMILY SSF54752 278 336 9.68E-23 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 Hamap MF_00268 Protein RecA [recA]. 14 339 52.236 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 13 334 4.4E-172 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 Gene3D G3DSA:3.40.50.300 43 277 9.3E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 SMART SM00382 67 238 1.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 Gene3D G3DSA:3.30.250.10 278 336 6.6E-32 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 PANTHER PTHR22942 14 345 2.9E-204 T 22-04-2016 JE55_RS12165 6a3aba284d125907bc1e0911c323708f 356 PANTHER PTHR22942:SF1 14 345 2.9E-204 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 JE55_RS00900 eb2a173a03450f86ff8077551d30b299 405 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 27 399 5.6E-113 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 JE55_RS00900 eb2a173a03450f86ff8077551d30b299 405 Pfam PF07687 Peptidase dimerisation domain 191 301 7.0E-23 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain JE55_RS00900 eb2a173a03450f86ff8077551d30b299 405 Gene3D G3DSA:3.40.630.10 23 203 3.2E-62 T 22-04-2016 JE55_RS00900 eb2a173a03450f86ff8077551d30b299 405 Gene3D G3DSA:3.40.630.10 344 400 3.2E-62 T 22-04-2016 JE55_RS00900 eb2a173a03450f86ff8077551d30b299 405 Pfam PF01546 Peptidase family M20/M25/M40 88 400 9.6E-38 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 JE55_RS00900 eb2a173a03450f86ff8077551d30b299 405 SUPERFAMILY SSF53187 23 194 9.71E-58 T 22-04-2016 JE55_RS00900 eb2a173a03450f86ff8077551d30b299 405 SUPERFAMILY SSF53187 321 400 9.71E-58 T 22-04-2016 JE55_RS00900 eb2a173a03450f86ff8077551d30b299 405 PANTHER PTHR11014 21 405 7.2E-134 T 22-04-2016 JE55_RS00900 eb2a173a03450f86ff8077551d30b299 405 PANTHER PTHR11014:SF80 21 405 7.2E-134 T 22-04-2016 JE55_RS00900 eb2a173a03450f86ff8077551d30b299 405 SUPERFAMILY SSF55031 195 301 2.09E-19 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain JE55_RS00900 eb2a173a03450f86ff8077551d30b299 405 Gene3D G3DSA:3.30.70.360 204 300 4.1E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain JE55_RS08610 898ae1ce48a8b5edb2712061767f4de4 371 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 371 98.89 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JE55_RS08610 898ae1ce48a8b5edb2712061767f4de4 371 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 291 5.1E-53 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JE55_RS08610 898ae1ce48a8b5edb2712061767f4de4 371 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 296 2.2E-97 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 JE55_RS08610 898ae1ce48a8b5edb2712061767f4de4 371 SUPERFAMILY SSF55931 5 369 2.49E-113 T 22-04-2016 JE55_RS08610 898ae1ce48a8b5edb2712061767f4de4 371 PANTHER PTHR36510:SF1 1 371 4.7E-120 T 22-04-2016 JE55_RS08610 898ae1ce48a8b5edb2712061767f4de4 371 PANTHER PTHR36510 1 371 4.7E-120 T 22-04-2016 JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 Gene3D G3DSA:3.40.190.10 173 262 1.4E-23 T 22-04-2016 JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 PANTHER PTHR30346 1 297 1.2E-99 T 22-04-2016 JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.5E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.5E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.5E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 Gene3D G3DSA:3.40.190.10 89 172 9.0E-17 T 22-04-2016 JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 SUPERFAMILY SSF53850 90 294 1.88E-48 T 22-04-2016 JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 Pfam PF03466 LysR substrate binding domain 89 289 1.8E-49 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 Gene3D G3DSA:1.10.10.10 1 85 4.7E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 SUPERFAMILY SSF46785 3 86 1.17E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.7E-24 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05825 bfdeb3d302e6e9eaccc5ecca8b85af91 311 PANTHER PTHR30346:SF3 1 297 1.2E-99 T 22-04-2016 JE55_RS01025 9be3b80a70b7f8e57ed6c69420cb011e 168 PANTHER PTHR36922:SF1 1 166 6.2E-74 T 22-04-2016 JE55_RS01025 9be3b80a70b7f8e57ed6c69420cb011e 168 Pfam PF09351 Domain of unknown function (DUF1993) 5 165 8.2E-64 T 22-04-2016 IPR018531 Domain of unknown function DUF1993 JE55_RS01025 9be3b80a70b7f8e57ed6c69420cb011e 168 PANTHER PTHR36922 1 166 6.2E-74 T 22-04-2016 JE55_RS01025 9be3b80a70b7f8e57ed6c69420cb011e 168 SUPERFAMILY SSF109854 4 167 1.65E-62 T 22-04-2016 JE55_RS01025 9be3b80a70b7f8e57ed6c69420cb011e 168 Gene3D G3DSA:1.20.120.450 1 166 4.5E-73 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 PANTHER PTHR11493:SF47 1 294 6.5E-152 T 22-04-2016 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 PANTHER PTHR11493:SF47 327 557 6.5E-152 T 22-04-2016 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 Gene3D G3DSA:3.30.413.10 408 551 3.6E-38 T 22-04-2016 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 SUPERFAMILY SSF56014 409 552 1.14E-41 T 22-04-2016 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 SUPERFAMILY SSF55124 252 276 1.01E-24 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 Gene3D G3DSA:3.30.413.10 120 277 8.5E-39 T 22-04-2016 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 50 110 8.4E-13 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 329 399 5.8E-17 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 SUPERFAMILY SSF55124 315 421 1.01E-24 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 PANTHER PTHR11493 1 294 6.5E-152 T 22-04-2016 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 PANTHER PTHR11493 327 557 6.5E-152 T 22-04-2016 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 Gene3D G3DSA:3.90.480.10 321 403 4.3E-36 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 Gene3D G3DSA:3.90.480.10 48 117 4.3E-36 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 SUPERFAMILY SSF56014 120 286 2.09E-45 T 22-04-2016 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 SUPERFAMILY SSF55124 1 126 1.01E-29 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 PRINTS PR00397 Sirohaem Fe-binding site signature 410 428 3.2E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 PRINTS PR00397 Sirohaem Fe-binding site signature 456 474 3.2E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 412 550 5.0E-12 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS13065 c26971708e2a7fbe66f7eae593bc1918 559 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 273 4.8E-38 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS16730 3f3bf26d1138843454ed5d9ffbaca1bc 304 Gene3D G3DSA:3.40.50.300 6 227 3.4E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16730 3f3bf26d1138843454ed5d9ffbaca1bc 304 PANTHER PTHR24220 7 271 2.5E-103 T 22-04-2016 JE55_RS16730 3f3bf26d1138843454ed5d9ffbaca1bc 304 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS16730 3f3bf26d1138843454ed5d9ffbaca1bc 304 Pfam PF00005 ABC transporter 22 164 1.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS16730 3f3bf26d1138843454ed5d9ffbaca1bc 304 PANTHER PTHR24220:SF165 7 271 2.5E-103 T 22-04-2016 JE55_RS16730 3f3bf26d1138843454ed5d9ffbaca1bc 304 TIGRFAM TIGR01288 nodI: nodulation ABC transporter NodI 5 303 9.6E-151 T 22-04-2016 IPR005978 Nodulation ABC transporter, NodI GO:0005215|GO:0005524|GO:0006810|GO:0009877|GO:0016020 JE55_RS16730 3f3bf26d1138843454ed5d9ffbaca1bc 304 SUPERFAMILY SSF52540 6 224 2.51E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16730 3f3bf26d1138843454ed5d9ffbaca1bc 304 SMART SM00382 30 216 2.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS06035 25a3f6692157fc21e6e73c1994b4268a 157 PANTHER PTHR35603:SF1 3 155 2.4E-26 T 22-04-2016 JE55_RS06035 25a3f6692157fc21e6e73c1994b4268a 157 PANTHER PTHR35603 3 155 2.4E-26 T 22-04-2016 JE55_RS06035 25a3f6692157fc21e6e73c1994b4268a 157 Pfam PF05433 Glycine zipper 2TM domain 66 106 1.2E-6 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 SUPERFAMILY SSF69055 295 388 3.92E-31 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 PANTHER PTHR30525 1 396 2.9E-214 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 Gene3D G3DSA:3.40.50.720 2 151 3.1E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 382 9.2E-154 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 385 46.328 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 Gene3D G3DSA:1.10.1740.10 306 388 2.0E-29 T 22-04-2016 JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 SUPERFAMILY SSF51735 3 151 6.4E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 PIRSF PIRSF006205 2 391 4.9E-152 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 147 232 2.4E-39 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 264 380 1.3E-41 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 133 4.5E-44 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS01165 27465d0c227a9d2e7ce82ed981e8ad18 398 SUPERFAMILY SSF55347 127 267 2.16E-60 T 22-04-2016 JE55_RS02250 09a8463c7ac8c43f650eebb26d3fbf9e 400 Gene3D G3DSA:3.30.1490.100 255 367 7.1E-33 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS02250 09a8463c7ac8c43f650eebb26d3fbf9e 400 PANTHER PTHR11076 19 378 3.7E-154 T 22-04-2016 JE55_RS02250 09a8463c7ac8c43f650eebb26d3fbf9e 400 SUPERFAMILY SSF56672 16 251 2.85E-92 T 22-04-2016 JE55_RS02250 09a8463c7ac8c43f650eebb26d3fbf9e 400 Pfam PF11799 impB/mucB/samB family C-terminal domain 252 352 2.1E-8 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS02250 09a8463c7ac8c43f650eebb26d3fbf9e 400 PANTHER PTHR11076:SF32 19 378 3.7E-154 T 22-04-2016 JE55_RS02250 09a8463c7ac8c43f650eebb26d3fbf9e 400 Gene3D G3DSA:1.10.150.20 183 251 6.0E-27 T 22-04-2016 JE55_RS02250 09a8463c7ac8c43f650eebb26d3fbf9e 400 Hamap MF_01113 DNA polymerase IV [dinB]. 18 366 36.612 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS02250 09a8463c7ac8c43f650eebb26d3fbf9e 400 Pfam PF00817 impB/mucB/samB family 24 171 1.4E-49 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS02250 09a8463c7ac8c43f650eebb26d3fbf9e 400 Gene3D G3DSA:3.30.70.270 83 181 2.3E-34 T 22-04-2016 JE55_RS02250 09a8463c7ac8c43f650eebb26d3fbf9e 400 SUPERFAMILY SSF100879 258 359 7.85E-20 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS02250 09a8463c7ac8c43f650eebb26d3fbf9e 400 Pfam PF11798 IMS family HHH motif 185 214 1.2E-7 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 SUPERFAMILY SSF52540 14 208 3.85E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 SUPERFAMILY SSF54814 184 299 3.6E-39 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 PANTHER PTHR11649:SF3 10 299 3.8E-107 T 22-04-2016 JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 Gene3D G3DSA:3.30.300.20 196 294 7.6E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 PANTHER PTHR11649 10 299 3.8E-107 T 22-04-2016 JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 281 3.1E-83 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 Pfam PF07650 KH domain 211 286 2.3E-18 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 14 34 1.6E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 82 100 1.6E-7 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 Hamap MF_00367 GTPase Era [era]. 9 298 34.409 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 171 1.3E-26 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 Gene3D G3DSA:3.40.50.300 13 195 3.1E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03115 addf51e39cc0fed45a28720427f80af5 299 Pfam PF01926 50S ribosome-binding GTPase 14 127 8.0E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS14180 0bb1bebbde257dcfbeb7dbe651381155 602 Pfam PF03814 Potassium-transporting ATPase A subunit 11 595 3.2E-235 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 JE55_RS14180 0bb1bebbde257dcfbeb7dbe651381155 602 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 597 35.123 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 JE55_RS14180 0bb1bebbde257dcfbeb7dbe651381155 602 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 242 596 5.5E-153 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 JE55_RS14180 0bb1bebbde257dcfbeb7dbe651381155 602 PANTHER PTHR30607 2 214 4.2E-287 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 JE55_RS14180 0bb1bebbde257dcfbeb7dbe651381155 602 PANTHER PTHR30607 244 601 4.2E-287 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 JE55_RS14180 0bb1bebbde257dcfbeb7dbe651381155 602 PIRSF PIRSF001294 1 599 7.3E-243 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 JE55_RS05180 e314252fca9c452009e88f8bbcf54423 143 Gene3D G3DSA:3.40.30.10 13 106 9.9E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS05180 e314252fca9c452009e88f8bbcf54423 143 SUPERFAMILY SSF52833 7 120 3.1E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS11790 214347d06a094850a69f8c7ef8841d38 406 SUPERFAMILY SSF56059 115 395 6.72E-31 T 22-04-2016 JE55_RS11790 214347d06a094850a69f8c7ef8841d38 406 Pfam PF13535 ATP-grasp domain 142 289 2.3E-13 T 22-04-2016 JE55_RS11790 214347d06a094850a69f8c7ef8841d38 406 Gene3D G3DSA:3.30.470.20 89 396 3.2E-24 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS28130 994f8c1a430ec47a826f19e195603ea4 249 PANTHER PTHR24220 8 240 1.0E-115 T 22-04-2016 JE55_RS28130 994f8c1a430ec47a826f19e195603ea4 249 SUPERFAMILY SSF52540 9 219 1.23E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS28130 994f8c1a430ec47a826f19e195603ea4 249 Gene3D G3DSA:3.40.50.300 9 220 8.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS28130 994f8c1a430ec47a826f19e195603ea4 249 PANTHER PTHR24220:SF534 8 240 1.0E-115 T 22-04-2016 JE55_RS28130 994f8c1a430ec47a826f19e195603ea4 249 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS28130 994f8c1a430ec47a826f19e195603ea4 249 SMART SM00382 21 233 1.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS28130 994f8c1a430ec47a826f19e195603ea4 249 Pfam PF00005 ABC transporter 12 167 8.3E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS02545 95bd88ed415d058bcbee0a0ed90d93be 344 PANTHER PTHR30217:SF3 7 231 2.3E-179 T 22-04-2016 JE55_RS02545 95bd88ed415d058bcbee0a0ed90d93be 344 PANTHER PTHR30217:SF3 253 343 2.3E-179 T 22-04-2016 JE55_RS02545 95bd88ed415d058bcbee0a0ed90d93be 344 Gene3D G3DSA:3.20.20.70 22 110 2.5E-4 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS02545 95bd88ed415d058bcbee0a0ed90d93be 344 Pfam PF01136 Peptidase family U32 89 343 9.8E-74 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS02545 95bd88ed415d058bcbee0a0ed90d93be 344 ProSitePatterns PS01276 Peptidase family U32 signature. 174 192 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS02545 95bd88ed415d058bcbee0a0ed90d93be 344 PANTHER PTHR30217 7 231 2.3E-179 T 22-04-2016 JE55_RS02545 95bd88ed415d058bcbee0a0ed90d93be 344 PANTHER PTHR30217 253 343 2.3E-179 T 22-04-2016 JE55_RS02545 95bd88ed415d058bcbee0a0ed90d93be 344 SUPERFAMILY SSF51366 22 132 2.54E-5 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 JE55_RS18165 665a9736849233506bf36a7efe2c3963 556 SUPERFAMILY SSF52799 4 106 4.1E-5 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like JE55_RS18165 665a9736849233506bf36a7efe2c3963 556 PANTHER PTHR10632 134 548 1.9E-173 T 22-04-2016 JE55_RS18165 665a9736849233506bf36a7efe2c3963 556 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 3 132 3.8E-41 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- JE55_RS18165 665a9736849233506bf36a7efe2c3963 556 Gene3D G3DSA:3.50.50.60 151 264 7.9E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS18165 665a9736849233506bf36a7efe2c3963 556 Gene3D G3DSA:3.50.50.60 407 472 7.9E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS18165 665a9736849233506bf36a7efe2c3963 556 PANTHER PTHR10632:SF2 134 548 1.9E-173 T 22-04-2016 JE55_RS18165 665a9736849233506bf36a7efe2c3963 556 Gene3D G3DSA:3.90.190.10 1 138 2.1E-48 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like JE55_RS18165 665a9736849233506bf36a7efe2c3963 556 SUPERFAMILY SSF51905 346 473 5.96E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS18165 665a9736849233506bf36a7efe2c3963 556 SUPERFAMILY SSF51905 150 249 5.96E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS18165 665a9736849233506bf36a7efe2c3963 556 Pfam PF04273 Putative phosphatase (DUF442) 2 109 2.3E-32 T 22-04-2016 IPR005939 Beta-lactamase hydrolase-like GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- JE55_RS18165 665a9736849233506bf36a7efe2c3963 556 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 151 272 2.8E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS04225 06f5761e7c794aec4b6cb19ee527d9b0 109 PANTHER PTHR36931 17 101 3.3E-34 T 22-04-2016 JE55_RS03235 5a644041161baa6c0d41a253e811cdc0 1093 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 3.4E-159 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 JE55_RS03235 5a644041161baa6c0d41a253e811cdc0 1093 Hamap MF_00970 Ribonuclease E [rne]. 1 1080 40.328 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 JE55_RS03235 5a644041161baa6c0d41a253e811cdc0 1093 Gene3D G3DSA:2.40.50.140 31 124 4.8E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03235 5a644041161baa6c0d41a253e811cdc0 1093 PANTHER PTHR30001 1 836 8.1E-305 T 22-04-2016 JE55_RS03235 5a644041161baa6c0d41a253e811cdc0 1093 SMART SM00316 37 118 3.0E-10 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS03235 5a644041161baa6c0d41a253e811cdc0 1093 SUPERFAMILY SSF50249 39 124 1.92E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03235 5a644041161baa6c0d41a253e811cdc0 1093 PANTHER PTHR30001:SF1 1 836 8.1E-305 T 22-04-2016 JE55_RS03235 5a644041161baa6c0d41a253e811cdc0 1093 Pfam PF00575 S1 RNA binding domain 36 117 1.8E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 JE55_RS03235 5a644041161baa6c0d41a253e811cdc0 1093 Pfam PF10150 Ribonuclease E/G family 120 391 5.8E-93 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 JE55_RS02700 20ad55121df3bfdcc68865800fd89ff6 264 SMART SM00382 37 236 2.6E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS02700 20ad55121df3bfdcc68865800fd89ff6 264 SUPERFAMILY SSF52540 13 258 3.15E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02700 20ad55121df3bfdcc68865800fd89ff6 264 PANTHER PTHR24220:SF347 14 264 4.7E-165 T 22-04-2016 JE55_RS02700 20ad55121df3bfdcc68865800fd89ff6 264 Pfam PF00005 ABC transporter 28 188 7.8E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS02700 20ad55121df3bfdcc68865800fd89ff6 264 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS02700 20ad55121df3bfdcc68865800fd89ff6 264 PIRSF PIRSF039085 9 264 6.4E-119 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 JE55_RS02700 20ad55121df3bfdcc68865800fd89ff6 264 PANTHER PTHR24220 14 264 4.7E-165 T 22-04-2016 JE55_RS02700 20ad55121df3bfdcc68865800fd89ff6 264 Gene3D G3DSA:3.40.50.300 13 259 1.1E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15510 b833fd2b04ee774c8ed0c0fd029a6127 260 Gene3D G3DSA:1.10.10.10 128 227 1.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15510 b833fd2b04ee774c8ed0c0fd029a6127 260 Pfam PF00072 Response regulator receiver domain 7 116 7.8E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS15510 b833fd2b04ee774c8ed0c0fd029a6127 260 SMART SM00862 149 226 7.3E-16 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS15510 b833fd2b04ee774c8ed0c0fd029a6127 260 PANTHER PTHR26402 5 227 3.1E-57 T 22-04-2016 JE55_RS15510 b833fd2b04ee774c8ed0c0fd029a6127 260 PANTHER PTHR26402:SF578 5 227 3.1E-57 T 22-04-2016 JE55_RS15510 b833fd2b04ee774c8ed0c0fd029a6127 260 SMART SM00448 5 116 8.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS15510 b833fd2b04ee774c8ed0c0fd029a6127 260 Gene3D G3DSA:3.40.50.2300 5 124 4.6E-31 T 22-04-2016 JE55_RS15510 b833fd2b04ee774c8ed0c0fd029a6127 260 SUPERFAMILY SSF52172 5 185 5.69E-34 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS15510 b833fd2b04ee774c8ed0c0fd029a6127 260 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 226 1.6E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS04830 a063c9e611a93cb9e69f6bcd30f684ad 164 PIRSF PIRSF003230 7 150 1.4E-45 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 JE55_RS04830 a063c9e611a93cb9e69f6bcd30f684ad 164 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 20 136 1.0E-32 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 JE55_RS04830 a063c9e611a93cb9e69f6bcd30f684ad 164 PANTHER PTHR31793 15 158 1.3E-49 T 22-04-2016 JE55_RS04830 a063c9e611a93cb9e69f6bcd30f684ad 164 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 17 140 1.5E-52 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- JE55_RS04830 a063c9e611a93cb9e69f6bcd30f684ad 164 PANTHER PTHR31793:SF9 15 158 1.3E-49 T 22-04-2016 JE55_RS04830 a063c9e611a93cb9e69f6bcd30f684ad 164 Gene3D G3DSA:3.10.129.10 15 147 4.3E-51 T 22-04-2016 IPR029069 HotDog domain JE55_RS04830 a063c9e611a93cb9e69f6bcd30f684ad 164 SUPERFAMILY SSF54637 15 145 1.91E-42 T 22-04-2016 IPR029069 HotDog domain JE55_RS04830 a063c9e611a93cb9e69f6bcd30f684ad 164 Pfam PF03061 Thioesterase superfamily 31 116 1.3E-18 T 22-04-2016 IPR006683 Thioesterase domain JE55_RS17605 235629b72279b145d2de67eed73f31fe 581 Pfam PF02321 Outer membrane efflux protein 261 435 4.1E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS17605 235629b72279b145d2de67eed73f31fe 581 Pfam PF02321 Outer membrane efflux protein 43 235 1.0E-16 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS17605 235629b72279b145d2de67eed73f31fe 581 PANTHER PTHR30203 42 471 9.9E-25 T 22-04-2016 JE55_RS17605 235629b72279b145d2de67eed73f31fe 581 SUPERFAMILY SSF56954 41 456 7.46E-52 T 22-04-2016 JE55_RS17605 235629b72279b145d2de67eed73f31fe 581 Gene3D G3DSA:1.20.1600.10 41 410 1.2E-39 T 22-04-2016 JE55_RS06725 d87d88978976333787c28bb230f838be 283 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 205 270 1.2E-11 T 22-04-2016 JE55_RS06725 d87d88978976333787c28bb230f838be 283 SUPERFAMILY SSF55166 152 270 5.76E-21 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain JE55_RS02665 b71568f81b0c7f4a9148067bebdd1306 349 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 16 337 6.6E-139 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 JE55_RS02665 b71568f81b0c7f4a9148067bebdd1306 349 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 349 163.013 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 JE55_RS02665 b71568f81b0c7f4a9148067bebdd1306 349 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 61 340 4.7E-58 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 JE55_RS02665 b71568f81b0c7f4a9148067bebdd1306 349 PIRSF PIRSF017020 12 346 1.7E-119 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 JE55_RS02665 b71568f81b0c7f4a9148067bebdd1306 349 SUPERFAMILY SSF53187 14 339 5.29E-86 T 22-04-2016 JE55_RS02665 b71568f81b0c7f4a9148067bebdd1306 349 Gene3D G3DSA:3.40.630.10 61 244 4.9E-14 T 22-04-2016 JE55_RS02665 b71568f81b0c7f4a9148067bebdd1306 349 PANTHER PTHR15162 12 342 2.7E-68 T 22-04-2016 JE55_RS00775 219e4760eac8b48a636e7535c81dd3b3 397 SUPERFAMILY SSF103473 27 394 1.28E-31 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS00775 219e4760eac8b48a636e7535c81dd3b3 397 Gene3D G3DSA:1.20.1250.20 27 206 3.5E-9 T 22-04-2016 JE55_RS00775 219e4760eac8b48a636e7535c81dd3b3 397 Gene3D G3DSA:1.20.1250.20 224 395 2.2E-13 T 22-04-2016 JE55_RS00775 219e4760eac8b48a636e7535c81dd3b3 397 Pfam PF07690 Major Facilitator Superfamily 32 330 2.5E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS01845 5916737762ef141cd8752f204396075b 114 PANTHER PTHR35862:SF2 6 112 1.6E-23 T 22-04-2016 JE55_RS01845 5916737762ef141cd8752f204396075b 114 Gene3D G3DSA:3.10.450.40 14 113 8.9E-29 T 22-04-2016 JE55_RS01845 5916737762ef141cd8752f204396075b 114 SUPERFAMILY SSF160719 15 112 2.88E-24 T 22-04-2016 JE55_RS01845 5916737762ef141cd8752f204396075b 114 PANTHER PTHR35862 6 112 1.6E-23 T 22-04-2016 JE55_RS01845 5916737762ef141cd8752f204396075b 114 Pfam PF04965 Gene 25-like lysozyme 22 104 1.3E-14 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD JE55_RS09325 7cd1533e944f903e1e2f169d5f876655 490 PANTHER PTHR11659:SF0 1 489 7.5E-255 T 22-04-2016 JE55_RS09325 7cd1533e944f903e1e2f169d5f876655 490 Pfam PF02637 GatB domain 336 489 2.0E-52 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 JE55_RS09325 7cd1533e944f903e1e2f169d5f876655 490 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 3 490 38.614 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 JE55_RS09325 7cd1533e944f903e1e2f169d5f876655 490 SUPERFAMILY SSF89095 305 410 2.49E-32 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 JE55_RS09325 7cd1533e944f903e1e2f169d5f876655 490 Gene3D G3DSA:1.10.10.410 434 489 1.5E-6 T 22-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal JE55_RS09325 7cd1533e944f903e1e2f169d5f876655 490 SUPERFAMILY SSF55931 5 304 1.44E-118 T 22-04-2016 JE55_RS09325 7cd1533e944f903e1e2f169d5f876655 490 Pfam PF02934 GatB/GatE catalytic domain 6 296 9.6E-112 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 JE55_RS09325 7cd1533e944f903e1e2f169d5f876655 490 PANTHER PTHR11659 1 489 7.5E-255 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 JE55_RS09325 7cd1533e944f903e1e2f169d5f876655 490 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 489 1.8E-171 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 JE55_RS09325 7cd1533e944f903e1e2f169d5f876655 490 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 152 166 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 JE55_RS09325 7cd1533e944f903e1e2f169d5f876655 490 SMART SM00845 336 489 2.7E-82 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 JE55_RS09385 aa28f2a0ce9ac0f8e740a5a8ab1ab622 299 Gene3D G3DSA:3.40.1160.10 30 297 6.2E-100 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS09385 aa28f2a0ce9ac0f8e740a5a8ab1ab622 299 Hamap MF_00082_B Acetylglutamate kinase [argB]. 30 298 35.308 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS09385 aa28f2a0ce9ac0f8e740a5a8ab1ab622 299 TIGRFAM TIGR00761 argB: acetylglutamate kinase 33 273 4.7E-73 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS09385 aa28f2a0ce9ac0f8e740a5a8ab1ab622 299 PANTHER PTHR23342 1 297 2.4E-104 T 22-04-2016 JE55_RS09385 aa28f2a0ce9ac0f8e740a5a8ab1ab622 299 PIRSF PIRSF000728 17 298 5.9E-101 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS09385 aa28f2a0ce9ac0f8e740a5a8ab1ab622 299 Pfam PF00696 Amino acid kinase family 32 275 1.9E-42 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS09385 aa28f2a0ce9ac0f8e740a5a8ab1ab622 299 SUPERFAMILY SSF53633 15 298 5.63E-87 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS17095 082ea45e62a6742b6956168c8f35c35f 468 Gene3D G3DSA:3.50.50.60 214 247 2.1E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS17095 082ea45e62a6742b6956168c8f35c35f 468 Gene3D G3DSA:3.50.50.60 303 358 2.1E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS17095 082ea45e62a6742b6956168c8f35c35f 468 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 6 361 4.5E-130 T 22-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase JE55_RS17095 082ea45e62a6742b6956168c8f35c35f 468 SUPERFAMILY SSF51905 268 423 6.79E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS17095 082ea45e62a6742b6956168c8f35c35f 468 SUPERFAMILY SSF51905 5 255 5.4E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS17095 082ea45e62a6742b6956168c8f35c35f 468 Gene3D G3DSA:3.50.50.60 12 213 2.8E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS17095 082ea45e62a6742b6956168c8f35c35f 468 PANTHER PTHR23024:SF214 51 130 1.1E-40 T 22-04-2016 JE55_RS17095 082ea45e62a6742b6956168c8f35c35f 468 SUPERFAMILY SSF51905 206 235 6.79E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS17095 082ea45e62a6742b6956168c8f35c35f 468 PANTHER PTHR23024 51 130 1.1E-40 T 22-04-2016 JE55_RS00390 4787abcb34babe4781a1f4286b320f36 153 PIRSF PIRSF000239 2 153 1.5E-30 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 JE55_RS00390 4787abcb34babe4781a1f4286b320f36 153 Gene3D G3DSA:3.40.30.10 3 153 1.7E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS00390 4787abcb34babe4781a1f4286b320f36 153 SUPERFAMILY SSF52833 4 153 4.49E-53 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS00390 4787abcb34babe4781a1f4286b320f36 153 PANTHER PTHR10681 3 153 5.3E-49 T 22-04-2016 JE55_RS00390 4787abcb34babe4781a1f4286b320f36 153 Pfam PF00578 AhpC/TSA family 6 132 2.6E-35 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS08320 75913312834d05065930f343914ccda0 829 SUPERFAMILY SSF56784 511 530 4.07E-55 T 22-04-2016 IPR023214 HAD-like domain JE55_RS08320 75913312834d05065930f343914ccda0 829 SUPERFAMILY SSF56784 579 821 4.07E-55 T 22-04-2016 IPR023214 HAD-like domain JE55_RS08320 75913312834d05065930f343914ccda0 829 PRINTS PR00941 Cadmium-transporting ATPase signature 295 315 7.1E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 JE55_RS08320 75913312834d05065930f343914ccda0 829 PRINTS PR00941 Cadmium-transporting ATPase signature 396 410 7.1E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 JE55_RS08320 75913312834d05065930f343914ccda0 829 PRINTS PR00941 Cadmium-transporting ATPase signature 377 393 7.1E-9 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 JE55_RS08320 75913312834d05065930f343914ccda0 829 Gene3D G3DSA:3.40.1110.10 527 648 5.0E-19 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 JE55_RS08320 75913312834d05065930f343914ccda0 829 Gene3D G3DSA:3.30.70.100 122 180 7.5E-5 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 Pfam PF00702 haloacid dehalogenase-like hydrolase 511 735 2.9E-41 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 SUPERFAMILY SSF55008 118 184 1.96E-7 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 JE55_RS08320 75913312834d05065930f343914ccda0 829 SUPERFAMILY SSF81665 261 314 3.4E-17 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 SUPERFAMILY SSF81665 412 503 3.4E-17 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 668 678 1.2E-23 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 526 1.2E-23 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 361 375 1.2E-23 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 745 757 1.2E-23 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 740 1.2E-23 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 620 799 3.1E-41 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 JE55_RS08320 75913312834d05065930f343914ccda0 829 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 283 527 1.3E-35 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 JE55_RS08320 75913312834d05065930f343914ccda0 829 SUPERFAMILY SSF81653 318 411 6.93E-24 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 Gene3D G3DSA:3.40.50.1000 649 790 2.8E-44 T 22-04-2016 IPR023214 HAD-like domain JE55_RS08320 75913312834d05065930f343914ccda0 829 Gene3D G3DSA:3.40.50.1000 485 526 2.8E-44 T 22-04-2016 IPR023214 HAD-like domain JE55_RS08320 75913312834d05065930f343914ccda0 829 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 514 520 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site JE55_RS08320 75913312834d05065930f343914ccda0 829 PANTHER PTHR24093 119 818 2.1E-251 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 Pfam PF00122 E1-E2 ATPase 281 503 9.4E-69 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 JE55_RS08320 75913312834d05065930f343914ccda0 829 Gene3D G3DSA:2.70.150.10 260 412 1.2E-26 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 JE55_RS08320 75913312834d05065930f343914ccda0 829 PANTHER PTHR24093:SF317 119 818 2.1E-251 T 22-04-2016 JE55_RS08320 75913312834d05065930f343914ccda0 829 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 260 824 3.3E-176 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 JE55_RS08615 edac4c84a6dc2f6c84b80597f76571e8 404 Pfam PF00999 Sodium/hydrogen exchanger family 22 384 3.4E-28 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JE55_RS08615 edac4c84a6dc2f6c84b80597f76571e8 404 PANTHER PTHR32507 1 403 6.2E-14 T 22-04-2016 JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 Pfam PF13638 PIN domain 86 230 1.4E-39 T 22-04-2016 IPR002716 PIN domain JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 PANTHER PTHR30473 83 258 6.9E-182 T 22-04-2016 JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 PANTHER PTHR30473 285 544 6.9E-182 T 22-04-2016 JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 Pfam PF02562 PhoH-like protein 331 535 1.1E-52 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 Gene3D G3DSA:3.40.50.1010 179 237 4.4E-9 T 22-04-2016 IPR029060 PIN domain-like JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 Gene3D G3DSA:3.40.50.1010 85 144 4.4E-9 T 22-04-2016 IPR029060 PIN domain-like JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 SUPERFAMILY SSF52540 449 522 1.24E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 SUPERFAMILY SSF52540 330 416 1.24E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 Gene3D G3DSA:3.40.50.300 328 543 1.3E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 SUPERFAMILY SSF88723 84 145 1.8E-11 T 22-04-2016 IPR029060 PIN domain-like JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 SUPERFAMILY SSF88723 181 233 1.8E-11 T 22-04-2016 IPR029060 PIN domain-like JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 PANTHER PTHR30473:SF2 83 258 6.9E-182 T 22-04-2016 JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 PANTHER PTHR30473:SF2 285 544 6.9E-182 T 22-04-2016 JE55_RS00395 9de4d9b4c353e308c1abe30c326bc1e6 544 SMART SM00670 84 218 5.0E-16 T 22-04-2016 IPR002716 PIN domain JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 11 1266 13.043 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070:SF23 848 1261 1.1E-214 T 22-04-2016 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070:SF23 316 504 1.1E-214 T 22-04-2016 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070:SF23 529 650 1.1E-214 T 22-04-2016 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070:SF23 13 87 1.1E-214 T 22-04-2016 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070:SF23 679 817 1.1E-214 T 22-04-2016 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070:SF23 123 216 1.1E-214 T 22-04-2016 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070 848 1261 1.1E-214 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070 316 504 1.1E-214 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070 529 650 1.1E-214 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070 13 87 1.1E-214 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070 679 817 1.1E-214 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 PANTHER PTHR11070 123 216 1.1E-214 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 SUPERFAMILY SSF52980 960 973 1.98E-66 T 22-04-2016 IPR011335 Restriction endonuclease type II-like JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 SUPERFAMILY SSF52980 1001 1266 1.98E-66 T 22-04-2016 IPR011335 Restriction endonuclease type II-like JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1037 1230 3.4E-8 T 22-04-2016 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Gene3D G3DSA:1.10.486.10 685 771 5.0E-48 T 22-04-2016 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Gene3D G3DSA:1.10.486.10 595 650 5.0E-48 T 22-04-2016 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Gene3D G3DSA:3.40.50.300 16 80 7.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Gene3D G3DSA:3.40.50.300 367 461 7.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Gene3D G3DSA:3.40.50.300 125 155 7.2E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Pfam PF00580 UvrD/REP helicase N-terminal domain 21 447 1.8E-55 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Gene3D G3DSA:1.10.3170.10 160 364 1.3E-44 T 22-04-2016 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 SUPERFAMILY SSF52540 341 482 4.5E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 SUPERFAMILY SSF52540 15 78 4.5E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 SUPERFAMILY SSF52540 123 203 4.5E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 SUPERFAMILY SSF52540 512 874 4.5E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Pfam PF13361 UvrD-like helicase C-terminal domain 773 868 2.6E-10 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 15 1264 6.8E-239 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Gene3D G3DSA:3.90.320.10 950 1268 5.8E-82 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Gene3D G3DSA:3.40.50.300 772 916 8.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14790 258df286f7b893d4c9d5fa35e2524a17 1270 Gene3D G3DSA:3.40.50.300 462 592 8.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14190 67aeb15103d1b15be60679b563c1327a 193 PANTHER PTHR30042:SF2 1 189 6.4E-88 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 JE55_RS14190 67aeb15103d1b15be60679b563c1327a 193 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 5 188 1.7E-70 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 JE55_RS14190 67aeb15103d1b15be60679b563c1327a 193 PANTHER PTHR30042 1 189 6.4E-88 T 22-04-2016 JE55_RS14190 67aeb15103d1b15be60679b563c1327a 193 Pfam PF02669 K+-transporting ATPase, c chain 7 187 2.5E-75 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 JE55_RS14190 67aeb15103d1b15be60679b563c1327a 193 PIRSF PIRSF001296 1 193 4.3E-77 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 JE55_RS14190 67aeb15103d1b15be60679b563c1327a 193 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 189 35.016 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 JE55_RS13685 1d2f5076934b46c6e38742a665e923af 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 41 5.6E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13685 1d2f5076934b46c6e38742a665e923af 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 51 5.6E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13685 1d2f5076934b46c6e38742a665e923af 320 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 62 5.6E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13685 1d2f5076934b46c6e38742a665e923af 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 9.8E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13685 1d2f5076934b46c6e38742a665e923af 320 PANTHER PTHR30126 13 320 4.9E-53 T 22-04-2016 JE55_RS13685 1d2f5076934b46c6e38742a665e923af 320 Pfam PF03466 LysR substrate binding domain 101 304 2.1E-29 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS13685 1d2f5076934b46c6e38742a665e923af 320 Gene3D G3DSA:3.40.190.10 187 266 2.1E-11 T 22-04-2016 JE55_RS13685 1d2f5076934b46c6e38742a665e923af 320 Gene3D G3DSA:3.40.190.10 102 186 2.6E-11 T 22-04-2016 JE55_RS13685 1d2f5076934b46c6e38742a665e923af 320 SUPERFAMILY SSF46785 11 93 1.45E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13685 1d2f5076934b46c6e38742a665e923af 320 SUPERFAMILY SSF53850 101 311 1.69E-33 T 22-04-2016 JE55_RS13685 1d2f5076934b46c6e38742a665e923af 320 Gene3D G3DSA:1.10.10.10 12 91 1.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS30565 d2b0b4795636339960af788b798e2c4d 668 Gene3D G3DSA:3.40.50.1820 562 668 5.0E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS30565 d2b0b4795636339960af788b798e2c4d 668 SUPERFAMILY SSF53474 558 667 1.52E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS30565 d2b0b4795636339960af788b798e2c4d 668 Pfam PF00561 alpha/beta hydrolase fold 589 667 3.0E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS30565 d2b0b4795636339960af788b798e2c4d 668 PANTHER PTHR10992 536 667 5.3E-20 T 22-04-2016 JE55_RS01560 e93d47f0fee6f1108730dafa0f29bb76 303 SMART SM00861 1 166 2.4E-38 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain JE55_RS01560 e93d47f0fee6f1108730dafa0f29bb76 303 SUPERFAMILY SSF52922 171 298 2.49E-16 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 JE55_RS01560 e93d47f0fee6f1108730dafa0f29bb76 303 Gene3D G3DSA:3.40.50.970 8 171 1.6E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS01560 e93d47f0fee6f1108730dafa0f29bb76 303 Gene3D G3DSA:3.40.50.920 181 295 2.8E-9 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 JE55_RS01560 e93d47f0fee6f1108730dafa0f29bb76 303 SUPERFAMILY SSF52518 8 164 8.03E-43 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS01560 e93d47f0fee6f1108730dafa0f29bb76 303 PANTHER PTHR11624:SF2 9 303 2.5E-49 T 22-04-2016 JE55_RS01560 e93d47f0fee6f1108730dafa0f29bb76 303 Pfam PF02779 Transketolase, pyrimidine binding domain 9 162 1.1E-27 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain JE55_RS01560 e93d47f0fee6f1108730dafa0f29bb76 303 PANTHER PTHR11624 9 303 2.5E-49 T 22-04-2016 IPR033247 Transketolase family JE55_RS01560 e93d47f0fee6f1108730dafa0f29bb76 303 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 183 247 1.4E-8 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II JE55_RS03430 1e3b04fb944f3c4ea177f5ab46ae733f 419 Pfam PF01435 Peptidase family M48 210 416 1.5E-37 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JE55_RS03430 1e3b04fb944f3c4ea177f5ab46ae733f 419 Gene3D G3DSA:3.30.2010.10 203 294 1.2E-19 T 22-04-2016 JE55_RS03430 1e3b04fb944f3c4ea177f5ab46ae733f 419 PANTHER PTHR10120 7 417 4.0E-111 T 22-04-2016 JE55_RS03430 1e3b04fb944f3c4ea177f5ab46ae733f 419 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 28 206 4.7E-52 T 22-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 JE55_RS03430 1e3b04fb944f3c4ea177f5ab46ae733f 419 PANTHER PTHR10120:SF24 7 417 4.0E-111 T 22-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 JE55_RS00515 60f0b3a450ce98cb6202f83d21b1f9b2 354 Pfam PF00534 Glycosyl transferases group 1 169 319 3.3E-26 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS00515 60f0b3a450ce98cb6202f83d21b1f9b2 354 Gene3D G3DSA:3.40.50.2000 162 308 1.0E-20 T 22-04-2016 JE55_RS00515 60f0b3a450ce98cb6202f83d21b1f9b2 354 SUPERFAMILY SSF53756 11 340 3.71E-64 T 22-04-2016 JE55_RS00515 60f0b3a450ce98cb6202f83d21b1f9b2 354 PANTHER PTHR12526 1 340 8.1E-46 T 22-04-2016 JE55_RS00515 60f0b3a450ce98cb6202f83d21b1f9b2 354 Pfam PF13439 Glycosyltransferase Family 4 18 119 1.5E-12 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JE55_RS17655 f18810c2fbcb54c977a75b396ba6dc3f 343 Gene3D G3DSA:3.40.190.10 146 286 5.9E-32 T 22-04-2016 JE55_RS17655 f18810c2fbcb54c977a75b396ba6dc3f 343 SUPERFAMILY SSF53850 31 340 1.27E-66 T 22-04-2016 JE55_RS17655 f18810c2fbcb54c977a75b396ba6dc3f 343 PANTHER PTHR30222:SF2 12 343 5.9E-74 T 22-04-2016 JE55_RS17655 f18810c2fbcb54c977a75b396ba6dc3f 343 Pfam PF13416 Bacterial extracellular solute-binding protein 48 300 1.5E-38 T 22-04-2016 JE55_RS17655 f18810c2fbcb54c977a75b396ba6dc3f 343 PANTHER PTHR30222 12 343 5.9E-74 T 22-04-2016 JE55_RS17655 f18810c2fbcb54c977a75b396ba6dc3f 343 Gene3D G3DSA:3.40.190.10 33 145 2.7E-13 T 22-04-2016 JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.6E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.1E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 SUPERFAMILY SSF51735 9 249 2.08E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 Gene3D G3DSA:3.40.50.720 9 253 1.5E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 PANTHER PTHR24322 11 137 6.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 PANTHER PTHR24322 153 185 6.9E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10365 367ea5594fd9e942003dfe5d3ca43835 259 Pfam PF00106 short chain dehydrogenase 9 193 5.1E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08345 edeff737047a3c179019f8cedf4482b8 264 Gene3D G3DSA:3.40.190.10 28 116 2.3E-37 T 22-04-2016 JE55_RS08345 edeff737047a3c179019f8cedf4482b8 264 Gene3D G3DSA:3.40.190.10 218 257 2.3E-37 T 22-04-2016 JE55_RS08345 edeff737047a3c179019f8cedf4482b8 264 PANTHER PTHR18966:SF152 20 258 4.0E-52 T 22-04-2016 JE55_RS08345 edeff737047a3c179019f8cedf4482b8 264 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 53 66 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 JE55_RS08345 edeff737047a3c179019f8cedf4482b8 264 Gene3D G3DSA:3.40.190.10 117 214 1.8E-27 T 22-04-2016 JE55_RS08345 edeff737047a3c179019f8cedf4482b8 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 257 7.1E-54 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS08345 edeff737047a3c179019f8cedf4482b8 264 PANTHER PTHR18966 20 258 4.0E-52 T 22-04-2016 JE55_RS08345 edeff737047a3c179019f8cedf4482b8 264 SMART SM00062 30 259 7.5E-61 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS08345 edeff737047a3c179019f8cedf4482b8 264 SUPERFAMILY SSF53850 1 258 1.24E-60 T 22-04-2016 JE55_RS04120 f45f6d858bfb4d29796114bf05d0fb41 378 Gene3D G3DSA:3.90.870.10 2 211 3.6E-98 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS04120 f45f6d858bfb4d29796114bf05d0fb41 378 PANTHER PTHR21327 1 373 5.7E-136 T 22-04-2016 JE55_RS04120 f45f6d858bfb4d29796114bf05d0fb41 378 SUPERFAMILY SSF55821 3 202 4.58E-85 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS04120 f45f6d858bfb4d29796114bf05d0fb41 378 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.808 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04120 f45f6d858bfb4d29796114bf05d0fb41 378 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 10 199 1.2E-71 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04120 f45f6d858bfb4d29796114bf05d0fb41 378 PANTHER PTHR21327:SF6 1 373 5.7E-136 T 22-04-2016 JE55_RS04120 f45f6d858bfb4d29796114bf05d0fb41 378 Pfam PF00925 GTP cyclohydrolase II 207 363 5.8E-33 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 JE55_RS04120 f45f6d858bfb4d29796114bf05d0fb41 378 SUPERFAMILY SSF142695 204 368 1.44E-44 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 JE55_RS04120 f45f6d858bfb4d29796114bf05d0fb41 378 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 6.7E-82 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04120 f45f6d858bfb4d29796114bf05d0fb41 378 PIRSF PIRSF001259 1 375 7.5E-115 T 22-04-2016 JE55_RS17260 b60acedeed3b7b6bce28ea57af0aee31 149 PANTHER PTHR34309 1 136 3.8E-27 T 22-04-2016 JE55_RS17260 b60acedeed3b7b6bce28ea57af0aee31 149 Pfam PF03928 Haem-degrading 5 133 2.8E-30 T 22-04-2016 IPR005624 Haem-degrading JE55_RS17260 b60acedeed3b7b6bce28ea57af0aee31 149 PANTHER PTHR34309:SF1 1 136 3.8E-27 T 22-04-2016 JE55_RS17260 b60acedeed3b7b6bce28ea57af0aee31 149 SUPERFAMILY SSF143744 3 137 8.24E-33 T 22-04-2016 JE55_RS04775 24d12d30ea5832cc72e560ce7d4a49e3 100 Pfam PF05957 Bacterial protein of unknown function (DUF883) 7 100 3.3E-33 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB JE55_RS04775 24d12d30ea5832cc72e560ce7d4a49e3 100 PANTHER PTHR35893 1 100 9.5E-25 T 22-04-2016 JE55_RS04775 24d12d30ea5832cc72e560ce7d4a49e3 100 PANTHER PTHR35893:SF3 1 100 9.5E-25 T 22-04-2016 JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 SUPERFAMILY SSF46785 15 97 1.18E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 Gene3D G3DSA:1.10.10.10 15 88 1.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 84 4.0E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 PANTHER PTHR11751:SF333 19 86 1.6E-17 T 22-04-2016 JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 PANTHER PTHR11751:SF333 133 157 1.6E-17 T 22-04-2016 JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 SMART SM00345 25 84 5.7E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 Pfam PF07702 UTRA domain 112 244 4.8E-26 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 8.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 8.2E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 Gene3D G3DSA:3.40.1410.10 92 249 2.1E-36 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 PANTHER PTHR11751 19 86 1.6E-17 T 22-04-2016 JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 PANTHER PTHR11751 133 157 1.6E-17 T 22-04-2016 JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 14 250 6.6E-70 T 22-04-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 SMART SM00866 105 245 4.5E-28 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JE55_RS05335 6dd48ab3c8d774d88ae3673ea20805db 258 SUPERFAMILY SSF64288 72 249 1.31E-38 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 PANTHER PTHR30126 1 307 2.9E-152 T 22-04-2016 JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.0E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 Gene3D G3DSA:3.40.190.10 91 179 6.9E-24 T 22-04-2016 JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 SUPERFAMILY SSF46785 1 88 6.39E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 Pfam PF03466 LysR substrate binding domain 89 294 1.9E-43 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 SUPERFAMILY SSF53850 90 297 2.01E-43 T 22-04-2016 JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 Gene3D G3DSA:1.10.10.10 1 89 6.5E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 Gene3D G3DSA:3.40.190.10 180 261 1.8E-29 T 22-04-2016 JE55_RS16775 4757269f873dc07ec7d1fc47557999a4 308 PANTHER PTHR30126:SF6 1 307 2.9E-152 T 22-04-2016 JE55_RS12470 09f8ced3139e486f232a94a46c8ab0dd 294 Pfam PF03466 LysR substrate binding domain 89 289 4.9E-47 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS12470 09f8ced3139e486f232a94a46c8ab0dd 294 Gene3D G3DSA:3.40.190.10 105 176 4.7E-23 T 22-04-2016 JE55_RS12470 09f8ced3139e486f232a94a46c8ab0dd 294 PANTHER PTHR30537:SF5 1 292 3.9E-112 T 22-04-2016 JE55_RS12470 09f8ced3139e486f232a94a46c8ab0dd 294 Gene3D G3DSA:3.40.190.10 177 260 8.4E-7 T 22-04-2016 JE55_RS12470 09f8ced3139e486f232a94a46c8ab0dd 294 SUPERFAMILY SSF46785 4 85 1.68E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12470 09f8ced3139e486f232a94a46c8ab0dd 294 Gene3D G3DSA:1.10.10.10 7 87 1.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12470 09f8ced3139e486f232a94a46c8ab0dd 294 SUPERFAMILY SSF53850 90 291 1.99E-46 T 22-04-2016 JE55_RS12470 09f8ced3139e486f232a94a46c8ab0dd 294 PANTHER PTHR30537 1 292 3.9E-112 T 22-04-2016 JE55_RS12470 09f8ced3139e486f232a94a46c8ab0dd 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 9.7E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS09645 1f4489f01b06a509dfedaf28bdf18463 430 Gene3D G3DSA:1.20.1250.20 17 215 1.3E-19 T 22-04-2016 JE55_RS09645 1f4489f01b06a509dfedaf28bdf18463 430 Gene3D G3DSA:1.20.1250.20 241 424 2.0E-19 T 22-04-2016 JE55_RS09645 1f4489f01b06a509dfedaf28bdf18463 430 ProSitePatterns PS00216 Sugar transport proteins signature 1. 297 313 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS09645 1f4489f01b06a509dfedaf28bdf18463 430 PANTHER PTHR23508 16 423 1.8E-174 T 22-04-2016 JE55_RS09645 1f4489f01b06a509dfedaf28bdf18463 430 PANTHER PTHR23508:SF11 16 423 1.8E-174 T 22-04-2016 JE55_RS09645 1f4489f01b06a509dfedaf28bdf18463 430 SUPERFAMILY SSF103473 16 422 5.23E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS09645 1f4489f01b06a509dfedaf28bdf18463 430 Pfam PF00083 Sugar (and other) transporter 21 228 2.4E-22 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JE55_RS09645 1f4489f01b06a509dfedaf28bdf18463 430 Pfam PF07690 Major Facilitator Superfamily 288 426 9.1E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS09645 1f4489f01b06a509dfedaf28bdf18463 430 ProSitePatterns PS00217 Sugar transport proteins signature 2. 129 154 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS01545 dc269439d8a8ab8cfa86ab9c5fffe910 364 PANTHER PTHR21152:SF1 1 363 2.4E-138 T 22-04-2016 JE55_RS01545 dc269439d8a8ab8cfa86ab9c5fffe910 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 3 363 42.554 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 JE55_RS01545 dc269439d8a8ab8cfa86ab9c5fffe910 364 Gene3D G3DSA:3.90.1150.10 261 362 3.3E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS01545 dc269439d8a8ab8cfa86ab9c5fffe910 364 PANTHER PTHR21152 1 363 2.4E-138 T 22-04-2016 JE55_RS01545 dc269439d8a8ab8cfa86ab9c5fffe910 364 PIRSF PIRSF000525 1 364 1.7E-135 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 JE55_RS01545 dc269439d8a8ab8cfa86ab9c5fffe910 364 SUPERFAMILY SSF53383 5 359 1.08E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS01545 dc269439d8a8ab8cfa86ab9c5fffe910 364 Pfam PF00266 Aminotransferase class-V 7 352 1.2E-35 T 22-04-2016 IPR000192 Aminotransferase class V domain JE55_RS01545 dc269439d8a8ab8cfa86ab9c5fffe910 364 Gene3D G3DSA:3.40.640.10 19 258 3.1E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 Gene3D G3DSA:3.90.226.10 501 686 6.7E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 Pfam PF00378 Enoyl-CoA hydratase/isomerase 499 652 2.6E-14 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 PANTHER PTHR23309:SF2 4 464 8.6E-120 T 22-04-2016 JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 PANTHER PTHR23309 4 464 8.6E-120 T 22-04-2016 JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 SUPERFAMILY SSF48179 344 459 8.5E-17 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 Gene3D G3DSA:1.10.1040.10 347 419 5.8E-6 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 Gene3D G3DSA:1.10.1040.10 195 294 2.1E-16 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 SUPERFAMILY SSF48179 192 310 6.97E-21 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 191 1.1E-46 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 SUPERFAMILY SSF52096 494 807 1.47E-40 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 SUPERFAMILY SSF51735 5 192 9.06E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 Gene3D G3DSA:3.40.50.720 5 194 1.8E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS11620 980c444f04cacede1a921cbdfcdf546d 811 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 194 293 3.8E-12 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS04290 918a0c240ad3aa482723ef99de8ed8ee 101 SUPERFAMILY SSF51278 1 101 1.44E-47 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04290 918a0c240ad3aa482723ef99de8ed8ee 101 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.205 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04290 918a0c240ad3aa482723ef99de8ed8ee 101 Pfam PF00699 Urease beta subunit 3 99 3.0E-45 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04290 918a0c240ad3aa482723ef99de8ed8ee 101 PANTHER PTHR33569:SF1 1 101 9.3E-61 T 22-04-2016 JE55_RS04290 918a0c240ad3aa482723ef99de8ed8ee 101 PANTHER PTHR33569 1 101 9.3E-61 T 22-04-2016 JE55_RS04290 918a0c240ad3aa482723ef99de8ed8ee 101 Gene3D G3DSA:2.10.150.10 1 101 1.3E-49 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS04290 918a0c240ad3aa482723ef99de8ed8ee 101 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 99 1.6E-43 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 JE55_RS16295 ac5a203be86f38542a84666c24e5f231 455 Gene3D G3DSA:1.10.10.10 1 80 6.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16295 ac5a203be86f38542a84666c24e5f231 455 Pfam PF04079 Segregation and condensation complex subunit ScpB 10 166 2.7E-49 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 JE55_RS16295 ac5a203be86f38542a84666c24e5f231 455 SUPERFAMILY SSF46785 83 158 2.03E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16295 ac5a203be86f38542a84666c24e5f231 455 PANTHER PTHR34298:SF2 1 177 7.5E-63 T 22-04-2016 JE55_RS16295 ac5a203be86f38542a84666c24e5f231 455 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 12 171 1.1E-32 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 JE55_RS16295 ac5a203be86f38542a84666c24e5f231 455 PANTHER PTHR34298 1 177 7.5E-63 T 22-04-2016 JE55_RS16295 ac5a203be86f38542a84666c24e5f231 455 Gene3D G3DSA:1.10.10.10 82 158 1.1E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16295 ac5a203be86f38542a84666c24e5f231 455 SUPERFAMILY SSF46785 1 80 2.58E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04065 db62304b0302cad5ab9c266395cb8d05 219 Gene3D G3DSA:1.10.3720.10 12 212 4.4E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS04065 db62304b0302cad5ab9c266395cb8d05 219 PANTHER PTHR30614 4 219 1.3E-94 T 22-04-2016 JE55_RS04065 db62304b0302cad5ab9c266395cb8d05 219 SUPERFAMILY SSF161098 13 202 1.05E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS04065 db62304b0302cad5ab9c266395cb8d05 219 PANTHER PTHR30614:SF18 4 219 1.3E-94 T 22-04-2016 JE55_RS04065 db62304b0302cad5ab9c266395cb8d05 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 212 5.3E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS04065 db62304b0302cad5ab9c266395cb8d05 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 1.1E-31 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 JE55_RS11390 3aee24e2a8cf7c2cce6c4330105abc74 530 Pfam PF01050 Mannose-6-phosphate isomerase 346 496 2.3E-71 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 JE55_RS11390 3aee24e2a8cf7c2cce6c4330105abc74 530 PANTHER PTHR12526:SF357 173 320 3.1E-97 T 22-04-2016 JE55_RS11390 3aee24e2a8cf7c2cce6c4330105abc74 530 PANTHER PTHR12526:SF357 383 500 3.1E-97 T 22-04-2016 JE55_RS11390 3aee24e2a8cf7c2cce6c4330105abc74 530 SUPERFAMILY SSF51182 209 504 2.4E-82 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS11390 3aee24e2a8cf7c2cce6c4330105abc74 530 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 20 500 1.9E-187 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 JE55_RS11390 3aee24e2a8cf7c2cce6c4330105abc74 530 PANTHER PTHR12526 173 320 3.1E-97 T 22-04-2016 JE55_RS11390 3aee24e2a8cf7c2cce6c4330105abc74 530 PANTHER PTHR12526 383 500 3.1E-97 T 22-04-2016 JE55_RS11390 3aee24e2a8cf7c2cce6c4330105abc74 530 Pfam PF00483 Nucleotidyl transferase 22 317 3.7E-53 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 JE55_RS11390 3aee24e2a8cf7c2cce6c4330105abc74 530 SUPERFAMILY SSF53448 19 311 2.35E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS11390 3aee24e2a8cf7c2cce6c4330105abc74 530 Gene3D G3DSA:2.60.120.10 389 504 7.4E-47 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS11390 3aee24e2a8cf7c2cce6c4330105abc74 530 Gene3D G3DSA:3.90.550.10 20 302 1.5E-91 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS08445 824e704c9bfb25d2e08ace30eb4193b5 89 Pfam PF00137 ATP synthase subunit C 14 76 2.2E-10 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 JE55_RS08445 824e704c9bfb25d2e08ace30eb4193b5 89 ProSitePatterns PS00605 ATP synthase c subunit signature. 43 64 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site JE55_RS08445 824e704c9bfb25d2e08ace30eb4193b5 89 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 24 80 4.8E-21 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 JE55_RS08445 824e704c9bfb25d2e08ace30eb4193b5 89 Gene3D G3DSA:1.20.20.10 7 82 9.5E-35 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 JE55_RS08445 824e704c9bfb25d2e08ace30eb4193b5 89 Hamap MF_01396 ATP synthase subunit c [atpH]. 12 80 13.939 T 22-04-2016 JE55_RS08445 824e704c9bfb25d2e08ace30eb4193b5 89 SUPERFAMILY SSF81333 8 82 1.02E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 PANTHER PTHR20856 1 102 6.6E-128 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 PANTHER PTHR20856 364 384 6.6E-128 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 Gene3D G3DSA:2.40.50.150 230 244 5.3E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 Gene3D G3DSA:2.40.50.150 1 109 5.3E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 Pfam PF00562 RNA polymerase Rpb2, domain 6 1 382 3.7E-86 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 Gene3D G3DSA:2.40.270.10 245 382 4.4E-51 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 PANTHER PTHR20856:SF20 364 384 6.6E-128 T 22-04-2016 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 PANTHER PTHR20856 219 313 6.6E-128 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 ProSitePatterns PS01166 RNA polymerases beta chain signature. 248 260 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 PANTHER PTHR20856:SF20 219 313 6.6E-128 T 22-04-2016 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 PANTHER PTHR20856:SF20 1 102 6.6E-128 T 22-04-2016 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 SUPERFAMILY SSF64484 224 381 3.05E-87 T 22-04-2016 JE55_RS25050 0af30859b077a4aca56b96b240ee9146 384 SUPERFAMILY SSF64484 1 111 3.05E-87 T 22-04-2016 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 SUPERFAMILY SSF53098 1 156 1.57E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 PANTHER PTHR30194 1 168 5.1E-61 T 22-04-2016 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 2.4E-50 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 Gene3D G3DSA:3.30.420.10 1 154 3.4E-65 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 1.9E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 1.9E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 1.9E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 1.9E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 1.9E-32 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 152 6.6E-53 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 47.875 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 JE55_RS05560 a42d48f3f80ba67d2d8819d9296ae9ca 180 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 JE55_RS05365 f3ea4e61e1111a25715dc3827fbf8a2e 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 44 60 3.7E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 JE55_RS05365 f3ea4e61e1111a25715dc3827fbf8a2e 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 68 84 3.7E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 JE55_RS05365 f3ea4e61e1111a25715dc3827fbf8a2e 162 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 139 157 3.7E-11 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 JE55_RS05365 f3ea4e61e1111a25715dc3827fbf8a2e 162 Pfam PF00210 Ferritin-like domain 25 161 7.4E-31 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 JE55_RS05365 f3ea4e61e1111a25715dc3827fbf8a2e 162 PANTHER PTHR30295 2 161 9.6E-70 T 22-04-2016 JE55_RS05365 f3ea4e61e1111a25715dc3827fbf8a2e 162 PANTHER PTHR30295:SF6 2 161 9.6E-70 T 22-04-2016 JE55_RS05365 f3ea4e61e1111a25715dc3827fbf8a2e 162 SUPERFAMILY SSF47240 9 161 2.55E-51 T 22-04-2016 IPR009078 Ferritin-like superfamily JE55_RS05365 f3ea4e61e1111a25715dc3827fbf8a2e 162 PIRSF PIRSF005900 1 162 1.5E-50 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 JE55_RS05365 f3ea4e61e1111a25715dc3827fbf8a2e 162 ProSitePatterns PS00819 Dps protein family signature 2. 70 84 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 JE55_RS05365 f3ea4e61e1111a25715dc3827fbf8a2e 162 Gene3D G3DSA:1.20.1260.10 3 161 4.9E-71 T 22-04-2016 IPR012347 Ferritin-related JE55_RS05365 f3ea4e61e1111a25715dc3827fbf8a2e 162 ProSitePatterns PS00818 Dps protein family signature 1. 44 60 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 SUPERFAMILY SSF53335 1 253 5.58E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 PANTHER PTHR30481:SF4 4 253 1.4E-78 T 22-04-2016 JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 1.99E-14 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 49 62 1.99E-14 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 170 182 1.99E-14 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 1.99E-14 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 Gene3D G3DSA:3.40.50.150 154 253 5.8E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 Gene3D G3DSA:3.40.50.150 2 58 5.8E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 Gene3D G3DSA:1.10.1020.10 59 116 4.0E-12 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 181 2.5E-22 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 PANTHER PTHR30481 4 253 1.4E-78 T 22-04-2016 JE55_RS01770 f6399950359bd48f5f5310976087d87c 262 PIRSF PIRSF000398 1 254 1.1E-44 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 Gene3D G3DSA:3.40.1170.10 16 136 9.4E-51 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 23 882 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 PANTHER PTHR11361 6 827 0.0 T 22-04-2016 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 Gene3D G3DSA:1.10.1420.10 338 501 4.8E-49 T 22-04-2016 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 23 877 24.581 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 711 727 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 SUPERFAMILY SSF52540 591 821 2.35E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 SUPERFAMILY SSF53150 133 300 1.96E-31 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 SMART SM00534 630 817 3.5E-116 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 Pfam PF00488 MutS domain V 634 820 1.6E-83 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 Pfam PF05192 MutS domain III 289 583 6.9E-34 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 SUPERFAMILY SSF48334 287 589 6.54E-84 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 Pfam PF01624 MutS domain I 24 135 2.5E-42 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 Gene3D G3DSA:3.30.420.110 144 276 3.0E-33 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 Pfam PF05190 MutS family domain IV 452 543 9.6E-32 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 Pfam PF05188 MutS domain II 148 272 2.3E-17 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 SUPERFAMILY SSF55271 16 131 2.62E-43 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 SMART SM00533 303 615 2.9E-88 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 PANTHER PTHR11361:SF86 6 827 0.0 T 22-04-2016 JE55_RS01985 876f8051ef1f866a8a87fd2e1bacb676 894 Gene3D G3DSA:3.40.50.300 591 821 1.4E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01565 01ef1d5986a0102f33580ae3fb2e2083 274 Gene3D G3DSA:3.40.50.970 10 266 1.6E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS01565 01ef1d5986a0102f33580ae3fb2e2083 274 PANTHER PTHR11624 1 268 1.6E-63 T 22-04-2016 IPR033247 Transketolase family JE55_RS01565 01ef1d5986a0102f33580ae3fb2e2083 274 SUPERFAMILY SSF52518 11 256 5.44E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS01565 01ef1d5986a0102f33580ae3fb2e2083 274 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 16 264 3.8E-36 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 JE55_RS01565 01ef1d5986a0102f33580ae3fb2e2083 274 PANTHER PTHR11624:SF86 1 268 1.6E-63 T 22-04-2016 JE55_RS01565 01ef1d5986a0102f33580ae3fb2e2083 274 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 JE55_RS07270 77646ba72357bcb70e162cfd1ee8f024 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.1E-52 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07270 77646ba72357bcb70e162cfd1ee8f024 121 PANTHER PTHR10871 1 115 4.5E-63 T 22-04-2016 JE55_RS07270 77646ba72357bcb70e162cfd1ee8f024 121 Gene3D G3DSA:1.10.8.50 1 71 1.9E-27 T 22-04-2016 JE55_RS07270 77646ba72357bcb70e162cfd1ee8f024 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.3E-31 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07270 77646ba72357bcb70e162cfd1ee8f024 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS07270 77646ba72357bcb70e162cfd1ee8f024 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.914 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07270 77646ba72357bcb70e162cfd1ee8f024 121 Gene3D G3DSA:4.10.910.10 72 121 3.0E-26 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal JE55_RS07270 77646ba72357bcb70e162cfd1ee8f024 121 PIRSF PIRSF002134 1 121 1.5E-40 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07270 77646ba72357bcb70e162cfd1ee8f024 121 SUPERFAMILY SSF46946 2 114 2.18E-44 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 JE55_RS06200 996aee660c2d93aa643539dc8d09c6ef 431 SUPERFAMILY SSF54631 195 330 1.24E-25 T 22-04-2016 JE55_RS06200 996aee660c2d93aa643539dc8d09c6ef 431 SUPERFAMILY SSF56176 347 423 1.36E-15 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS06200 996aee660c2d93aa643539dc8d09c6ef 431 Pfam PF01595 Domain of unknown function DUF21 13 183 6.7E-47 T 22-04-2016 IPR002550 Domain of unknown function DUF21 JE55_RS06200 996aee660c2d93aa643539dc8d09c6ef 431 Pfam PF00571 CBS domain 280 326 3.1E-6 T 22-04-2016 IPR000644 CBS domain JE55_RS06200 996aee660c2d93aa643539dc8d09c6ef 431 SMART SM01091 343 421 4.3E-15 T 22-04-2016 IPR005170 Transporter-associated domain JE55_RS06200 996aee660c2d93aa643539dc8d09c6ef 431 Gene3D G3DSA:3.10.580.10 195 319 1.5E-17 T 22-04-2016 JE55_RS06200 996aee660c2d93aa643539dc8d09c6ef 431 PANTHER PTHR22777 1 417 1.9E-109 T 22-04-2016 JE55_RS06200 996aee660c2d93aa643539dc8d09c6ef 431 Gene3D G3DSA:3.30.465.10 320 418 4.3E-18 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 JE55_RS06200 996aee660c2d93aa643539dc8d09c6ef 431 Pfam PF03471 Transporter associated domain 346 419 1.1E-11 T 22-04-2016 IPR005170 Transporter-associated domain JE55_RS15915 9a5cb1bd8875828a79649580cc638f8e 666 SUPERFAMILY SSF53613 13 337 4.83E-70 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS15915 9a5cb1bd8875828a79649580cc638f8e 666 Gene3D G3DSA:3.40.1190.20 9 344 4.6E-84 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS15915 9a5cb1bd8875828a79649580cc638f8e 666 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 282 295 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JE55_RS15915 9a5cb1bd8875828a79649580cc638f8e 666 Pfam PF00294 pfkB family carbohydrate kinase 15 330 5.1E-46 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB JE55_RS15915 9a5cb1bd8875828a79649580cc638f8e 666 PANTHER PTHR10584 1 362 9.3E-140 T 22-04-2016 JE55_RS15915 9a5cb1bd8875828a79649580cc638f8e 666 PANTHER PTHR10584:SF194 1 362 9.3E-140 T 22-04-2016 JE55_RS15915 9a5cb1bd8875828a79649580cc638f8e 666 Pfam PF09863 Uncharacterized protein conserved in bacteria (DUF2090) 333 647 6.8E-135 T 22-04-2016 IPR018659 Protein of unknown function DUF2090 JE55_RS15915 9a5cb1bd8875828a79649580cc638f8e 666 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 14 338 3.6E-118 T 22-04-2016 IPR030830 5-dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92|UniPathway: UPA00076 JE55_RS15885 73291a556a3b7f855e759af9d85f11e4 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 266 1.0E-29 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS15885 73291a556a3b7f855e759af9d85f11e4 311 PANTHER PTHR11795:SF379 284 311 7.3E-74 T 22-04-2016 JE55_RS15885 73291a556a3b7f855e759af9d85f11e4 311 PANTHER PTHR11795:SF379 1 261 7.3E-74 T 22-04-2016 JE55_RS15885 73291a556a3b7f855e759af9d85f11e4 311 PANTHER PTHR11795 284 311 7.3E-74 T 22-04-2016 JE55_RS15885 73291a556a3b7f855e759af9d85f11e4 311 PANTHER PTHR11795 1 261 7.3E-74 T 22-04-2016 JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 334 1.2E-31 T 22-04-2016 IPR000160 GGDEF domain JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 Pfam PF08448 PAS fold 57 156 3.9E-7 T 22-04-2016 IPR013656 PAS fold-4 JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 SUPERFAMILY SSF55073 174 340 2.28E-30 T 22-04-2016 IPR029787 Nucleotide cyclase JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 SUPERFAMILY SSF141868 355 600 5.62E-85 T 22-04-2016 IPR001633 EAL domain JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 Pfam PF00563 EAL domain 356 589 5.0E-72 T 22-04-2016 IPR001633 EAL domain JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 SUPERFAMILY SSF55785 57 165 1.06E-10 T 22-04-2016 IPR000014 PAS domain JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 SMART SM00267 158 339 2.4E-37 T 22-04-2016 IPR000160 GGDEF domain JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 Gene3D G3DSA:3.20.20.450 352 602 1.0E-95 T 22-04-2016 IPR001633 EAL domain JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 PANTHER PTHR33121 185 201 4.8E-77 T 22-04-2016 JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 PANTHER PTHR33121 303 604 4.8E-77 T 22-04-2016 JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 57 164 2.9E-6 T 22-04-2016 IPR000014 PAS domain JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 170 337 3.8E-24 T 22-04-2016 IPR000160 GGDEF domain JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 PANTHER PTHR33121:SF13 185 201 4.8E-77 T 22-04-2016 JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 PANTHER PTHR33121:SF13 303 604 4.8E-77 T 22-04-2016 JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 SMART SM00052 349 595 2.7E-111 T 22-04-2016 IPR001633 EAL domain JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 Gene3D G3DSA:3.30.70.270 170 341 6.5E-38 T 22-04-2016 JE55_RS14680 972da223bbad259304dfce5e21b12e39 611 Gene3D G3DSA:3.30.450.20 57 156 3.8E-11 T 22-04-2016 JE55_RS08415 326a142127dda47080febb3f1fa8c3dc 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 1.4E-44 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08415 326a142127dda47080febb3f1fa8c3dc 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 22.857 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08415 326a142127dda47080febb3f1fa8c3dc 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 5.8E-30 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08415 326a142127dda47080febb3f1fa8c3dc 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 1.0E-39 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08415 326a142127dda47080febb3f1fa8c3dc 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 132 6.3E-11 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain JE55_RS08415 326a142127dda47080febb3f1fa8c3dc 141 PANTHER PTHR13822 1 141 2.8E-44 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08415 326a142127dda47080febb3f1fa8c3dc 141 Gene3D G3DSA:1.20.5.440 90 133 1.1E-15 T 22-04-2016 JE55_RS08415 326a142127dda47080febb3f1fa8c3dc 141 Gene3D G3DSA:2.60.15.10 1 89 6.1E-31 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08415 326a142127dda47080febb3f1fa8c3dc 141 SUPERFAMILY SSF51344 3 85 5.36E-25 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08415 326a142127dda47080febb3f1fa8c3dc 141 SUPERFAMILY SSF46604 87 134 3.14E-12 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 436 2.7E-135 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 PIRSF PIRSF000124 1 455 9.6E-151 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 SUPERFAMILY SSF52413 315 450 1.15E-40 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 SUPERFAMILY SSF48179 212 309 3.91E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 PANTHER PTHR11374:SF18 1 460 4.4E-249 T 22-04-2016 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 Gene3D G3DSA:3.40.50.720 1 214 4.9E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 PIRSF PIRSF500134 1 458 1.8E-188 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 439 5.5E-33 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 SMART SM00984 328 440 4.5E-51 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 189 8.2E-65 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 Gene3D G3DSA:1.20.5.100 215 242 1.1E-17 T 22-04-2016 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 PANTHER PTHR11374 1 460 4.4E-249 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 SUPERFAMILY SSF51735 1 202 1.16E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 212 304 3.9E-38 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 JE55_RS03575 9ea5ec0c06ecc2c8d689ff0c3c8df48a 466 Gene3D G3DSA:3.40.50.720 243 458 2.0E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS23120 1efbb82e29ab285dc1472bcb1959ae9a 395 Pfam PF13476 AAA domain 289 352 3.1E-10 T 22-04-2016 JE55_RS23120 1efbb82e29ab285dc1472bcb1959ae9a 395 SUPERFAMILY SSF52540 266 394 1.67E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS23120 1efbb82e29ab285dc1472bcb1959ae9a 395 PANTHER PTHR11059 286 395 2.1E-30 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JE55_RS23120 1efbb82e29ab285dc1472bcb1959ae9a 395 Gene3D G3DSA:3.40.50.300 285 394 5.7E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05210 915c5a1bbb0c5239cea30cbf008b2329 549 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 505 3.5E-19 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal JE55_RS05210 915c5a1bbb0c5239cea30cbf008b2329 549 SUPERFAMILY SSF52540 1 215 8.41E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05210 915c5a1bbb0c5239cea30cbf008b2329 549 PIRSF PIRSF003128 1 549 1.3E-148 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JE55_RS05210 915c5a1bbb0c5239cea30cbf008b2329 549 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 548 9.9E-151 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JE55_RS05210 915c5a1bbb0c5239cea30cbf008b2329 549 SUPERFAMILY SSF52540 3 50 5.57E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05210 915c5a1bbb0c5239cea30cbf008b2329 549 SUPERFAMILY SSF52540 310 510 5.57E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05210 915c5a1bbb0c5239cea30cbf008b2329 549 Gene3D G3DSA:3.40.50.300 1 204 3.8E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05210 915c5a1bbb0c5239cea30cbf008b2329 549 PANTHER PTHR11059 2 547 1.9E-152 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JE55_RS05210 915c5a1bbb0c5239cea30cbf008b2329 549 SMART SM00382 21 504 3.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS05210 915c5a1bbb0c5239cea30cbf008b2329 549 Gene3D G3DSA:3.40.50.300 426 504 2.4E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17200 aff5bcd9e124745d9f1ca3b6167ac4ba 408 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 230 351 3.3E-33 T 22-04-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 JE55_RS17200 aff5bcd9e124745d9f1ca3b6167ac4ba 408 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 7 200 1.0E-41 T 22-04-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 JE55_RS17200 aff5bcd9e124745d9f1ca3b6167ac4ba 408 PIRSF PIRSF036428 1 401 3.3E-139 T 22-04-2016 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase GO:0008276|GO:0009236 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|KEGG: 00860+2.1.1.132|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00148 JE55_RS17200 aff5bcd9e124745d9f1ca3b6167ac4ba 408 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 178 5.7E-18 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS17200 aff5bcd9e124745d9f1ca3b6167ac4ba 408 Gene3D G3DSA:3.40.1010.10 3 106 1.7E-22 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 JE55_RS17200 aff5bcd9e124745d9f1ca3b6167ac4ba 408 Gene3D G3DSA:3.40.50.150 227 371 6.4E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS17200 aff5bcd9e124745d9f1ca3b6167ac4ba 408 SUPERFAMILY SSF53335 214 375 1.97E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS17200 aff5bcd9e124745d9f1ca3b6167ac4ba 408 PANTHER PTHR14741:SF34 221 353 2.5E-47 T 22-04-2016 JE55_RS17200 aff5bcd9e124745d9f1ca3b6167ac4ba 408 SUPERFAMILY SSF53790 4 204 9.16E-39 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS17200 aff5bcd9e124745d9f1ca3b6167ac4ba 408 PANTHER PTHR14741 221 353 2.5E-47 T 22-04-2016 JE55_RS17200 aff5bcd9e124745d9f1ca3b6167ac4ba 408 Gene3D G3DSA:3.30.950.10 107 207 5.5E-28 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Pfam PF00562 RNA polymerase Rpb2, domain 6 725 1290 3.3E-158 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 PANTHER PTHR20856:SF20 1053 1147 0.0 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 PANTHER PTHR20856:SF20 1198 1368 0.0 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 PANTHER PTHR20856:SF20 346 731 0.0 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 PANTHER PTHR20856:SF20 1 235 0.0 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 PANTHER PTHR20856:SF20 749 936 0.0 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Pfam PF04560 RNA polymerase Rpb2, domain 7 1292 1366 1.4E-25 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Gene3D G3DSA:2.30.150.10 598 662 7.6E-26 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Gene3D G3DSA:2.40.50.100 721 798 6.3E-29 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1082 1094 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1364 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 PANTHER PTHR20856 1053 1147 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 PANTHER PTHR20856 1198 1368 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 PANTHER PTHR20856 346 731 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 PANTHER PTHR20856 1 235 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 PANTHER PTHR20856 749 936 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Pfam PF10385 RNA polymerase beta subunit external 1 domain 597 662 8.8E-23 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 SUPERFAMILY SSF64484 12 232 0.0 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 SUPERFAMILY SSF64484 349 945 0.0 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 SUPERFAMILY SSF64484 1058 1366 0.0 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1368 12.231 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 356 460 1.0E-14 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Pfam PF04561 RNA polymerase Rpb2, domain 2 156 228 1.7E-6 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Pfam PF04565 RNA polymerase Rpb2, domain 3 519 586 1.0E-31 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Gene3D G3DSA:2.40.50.150 1064 1078 6.2E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Gene3D G3DSA:2.40.50.150 834 943 6.2E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Gene3D G3DSA:3.90.1100.10 665 719 2.5E-147 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Gene3D G3DSA:3.90.1100.10 451 597 2.5E-147 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Gene3D G3DSA:3.90.1100.10 22 156 2.5E-147 T 22-04-2016 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Gene3D G3DSA:3.90.1110.10 352 450 1.7E-63 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Gene3D G3DSA:3.90.1110.10 158 235 1.7E-63 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Pfam PF04563 RNA polymerase beta subunit 27 506 2.9E-35 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Gene3D G3DSA:2.40.270.10 1079 1268 7.9E-86 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS07430 2bb325dc7315e689a8479b4a970a18cd 1368 Gene3D G3DSA:2.40.270.10 799 826 7.9E-86 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS02725 80ad6df49141b093805324391f5835c4 289 SUPERFAMILY SSF88713 9 274 4.45E-68 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JE55_RS02725 80ad6df49141b093805324391f5835c4 289 Pfam PF04794 YdjC-like protein 11 262 8.2E-56 T 22-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like JE55_RS02725 80ad6df49141b093805324391f5835c4 289 Gene3D G3DSA:3.20.20.370 8 274 3.5E-71 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 JE55_RS02725 80ad6df49141b093805324391f5835c4 289 TIGRFAM TIGR03473 HpnK: hopanoid biosynthesis associated protein HpnK 9 275 9.3E-127 T 22-04-2016 IPR017836 Hopanoid biosynthesis associated protein HpnK JE55_RS02725 80ad6df49141b093805324391f5835c4 289 PANTHER PTHR31609 5 274 7.4E-45 T 22-04-2016 JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 SMART SM00345 26 85 1.5E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 Pfam PF07702 UTRA domain 106 241 1.0E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 PANTHER PTHR11751:SF333 134 157 3.2E-22 T 22-04-2016 JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 PANTHER PTHR11751:SF333 21 88 3.2E-22 T 22-04-2016 JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 Gene3D G3DSA:1.10.10.10 15 81 5.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 85 5.1E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 SUPERFAMILY SSF46785 15 89 9.81E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 SUPERFAMILY SSF64288 73 247 3.14E-45 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 Gene3D G3DSA:3.40.1410.10 82 247 2.3E-46 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 PANTHER PTHR11751 134 157 3.2E-22 T 22-04-2016 JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 PANTHER PTHR11751 21 88 3.2E-22 T 22-04-2016 JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 6.3E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 6.3E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS12775 0b39cc2a1dd52ba6aff4607d1f6d30f0 248 SMART SM00866 105 241 1.9E-36 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JE55_RS18795 b183b28ea293c3dc1927627982f7dcd0 97 SMART SM01211 2 97 5.7E-10 T 22-04-2016 JE55_RS18795 b183b28ea293c3dc1927627982f7dcd0 97 Gene3D G3DSA:3.40.50.880 15 91 6.5E-4 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS18795 b183b28ea293c3dc1927627982f7dcd0 97 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1 96 3.8E-33 T 22-04-2016 JE55_RS18795 b183b28ea293c3dc1927627982f7dcd0 97 SUPERFAMILY SSF52317 2 96 5.79E-31 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS18795 b183b28ea293c3dc1927627982f7dcd0 97 PANTHER PTHR10099 1 97 2.5E-52 T 22-04-2016 JE55_RS18795 b183b28ea293c3dc1927627982f7dcd0 97 PANTHER PTHR10099:SF5 1 97 2.5E-52 T 22-04-2016 JE55_RS11965 02023bd44ab66f21b6e8016d69e33cc2 577 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 255 4.9E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS11965 02023bd44ab66f21b6e8016d69e33cc2 577 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 391 559 4.4E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS11965 02023bd44ab66f21b6e8016d69e33cc2 577 SUPERFAMILY SSF161098 64 257 8.63E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS11965 02023bd44ab66f21b6e8016d69e33cc2 577 Gene3D G3DSA:1.10.3720.10 374 563 1.3E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS11965 02023bd44ab66f21b6e8016d69e33cc2 577 Gene3D G3DSA:1.10.3720.10 66 255 1.9E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS11965 02023bd44ab66f21b6e8016d69e33cc2 577 PANTHER PTHR30151 368 573 4.8E-150 T 22-04-2016 JE55_RS11965 02023bd44ab66f21b6e8016d69e33cc2 577 PANTHER PTHR30151 68 226 4.8E-150 T 22-04-2016 JE55_RS11965 02023bd44ab66f21b6e8016d69e33cc2 577 SUPERFAMILY SSF161098 374 562 2.75E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS11965 02023bd44ab66f21b6e8016d69e33cc2 577 PANTHER PTHR30151:SF10 368 573 4.8E-150 T 22-04-2016 JE55_RS11965 02023bd44ab66f21b6e8016d69e33cc2 577 PANTHER PTHR30151:SF10 68 226 4.8E-150 T 22-04-2016 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 SUPERFAMILY SSF52540 6 221 4.43E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 Gene3D G3DSA:3.40.50.300 3 210 9.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 PANTHER PTHR23115:SF151 1 395 1.8E-262 T 22-04-2016 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 7.0E-59 T 22-04-2016 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 PANTHER PTHR23115 1 395 1.8E-262 T 22-04-2016 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 Gene3D G3DSA:2.40.30.10 211 300 3.6E-36 T 22-04-2016 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.7E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 SUPERFAMILY SSF50465 300 395 5.28E-37 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.8E-34 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 Gene3D G3DSA:2.40.30.10 302 395 1.8E-47 T 22-04-2016 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 4.1E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 SUPERFAMILY SSF50447 207 303 1.57E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 8.4E-229 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 JE55_RS07470 6f34a896473cf79a154bc2ec2b64063d 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.488 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 SUPERFAMILY SSF52540 6 221 4.43E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 Gene3D G3DSA:3.40.50.300 3 210 9.1E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.6E-25 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 PANTHER PTHR23115:SF151 1 395 1.8E-262 T 22-04-2016 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 7.0E-59 T 22-04-2016 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 PANTHER PTHR23115 1 395 1.8E-262 T 22-04-2016 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 Gene3D G3DSA:2.40.30.10 211 300 3.6E-36 T 22-04-2016 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 Pfam PF03144 Elongation factor Tu domain 2 227 295 5.7E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 SUPERFAMILY SSF50465 300 395 5.28E-37 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.8E-34 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 Gene3D G3DSA:2.40.30.10 302 395 1.8E-47 T 22-04-2016 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 4.1E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 SUPERFAMILY SSF50447 207 303 1.57E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 8.4E-229 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 JE55_RS07395 6f34a896473cf79a154bc2ec2b64063d 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.488 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 JE55_RS10395 97641110959355a6eee53a1d6dec910f 359 PANTHER PTHR21091 28 357 6.0E-161 T 22-04-2016 JE55_RS10395 97641110959355a6eee53a1d6dec910f 359 PANTHER PTHR21091:SF112 28 357 6.0E-161 T 22-04-2016 JE55_RS10395 97641110959355a6eee53a1d6dec910f 359 SUPERFAMILY SSF82282 26 353 8.24E-102 T 22-04-2016 IPR003726 Homocysteine-binding domain JE55_RS10395 97641110959355a6eee53a1d6dec910f 359 Gene3D G3DSA:3.20.20.330 25 355 6.1E-119 T 22-04-2016 IPR003726 Homocysteine-binding domain JE55_RS10395 97641110959355a6eee53a1d6dec910f 359 Pfam PF02574 Homocysteine S-methyltransferase 35 343 1.5E-90 T 22-04-2016 IPR003726 Homocysteine-binding domain JE55_RS16335 b592d42d378b72465ff2aecbded61bd7 411 Pfam PF00529 HlyD membrane-fusion protein of T1SS 181 344 1.0E-12 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 JE55_RS16335 b592d42d378b72465ff2aecbded61bd7 411 SUPERFAMILY SSF111369 180 266 3.79E-6 T 22-04-2016 JE55_RS16335 b592d42d378b72465ff2aecbded61bd7 411 PANTHER PTHR30386:SF6 1 375 5.9E-168 T 22-04-2016 JE55_RS16335 b592d42d378b72465ff2aecbded61bd7 411 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 288 4.7E-15 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JE55_RS16335 b592d42d378b72465ff2aecbded61bd7 411 PANTHER PTHR30386 1 375 5.9E-168 T 22-04-2016 JE55_RS16335 b592d42d378b72465ff2aecbded61bd7 411 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 19 344 4.1E-118 T 22-04-2016 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 JE55_RS16335 b592d42d378b72465ff2aecbded61bd7 411 Gene3D G3DSA:2.40.50.100 60 93 4.1E-18 T 22-04-2016 JE55_RS16335 b592d42d378b72465ff2aecbded61bd7 411 Gene3D G3DSA:2.40.50.100 214 247 4.1E-18 T 22-04-2016 JE55_RS16335 b592d42d378b72465ff2aecbded61bd7 411 SUPERFAMILY SSF111369 59 112 8.37E-8 T 22-04-2016 JE55_RS11670 59734f664ccdb87e7d7d7cf09e977d38 787 Pfam PF04453 Organic solvent tolerance protein 317 688 6.9E-97 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 JE55_RS11670 59734f664ccdb87e7d7d7cf09e977d38 787 PANTHER PTHR30189 86 780 3.7E-65 T 22-04-2016 JE55_RS11670 59734f664ccdb87e7d7d7cf09e977d38 787 Gene3D G3DSA:2.60.450.10 91 183 2.8E-8 T 22-04-2016 JE55_RS11670 59734f664ccdb87e7d7d7cf09e977d38 787 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 23 754 19.747 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 JE55_RS02140 9d7ced400b71f61e634deea9a6ac0272 69 PANTHER PTHR37532:SF1 1 68 1.1E-31 T 22-04-2016 JE55_RS02140 9d7ced400b71f61e634deea9a6ac0272 69 SUPERFAMILY SSF140319 1 62 3.53E-28 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 JE55_RS02140 9d7ced400b71f61e634deea9a6ac0272 69 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 1.9E-35 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 JE55_RS02140 9d7ced400b71f61e634deea9a6ac0272 69 PANTHER PTHR37532 1 68 1.1E-31 T 22-04-2016 JE55_RS02140 9d7ced400b71f61e634deea9a6ac0272 69 PIRSF PIRSF039003 1 68 9.0E-35 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 JE55_RS02140 9d7ced400b71f61e634deea9a6ac0272 69 Gene3D G3DSA:1.10.10.600 1 63 3.2E-34 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 JE55_RS02140 9d7ced400b71f61e634deea9a6ac0272 69 Pfam PF04384 Iron-sulphur cluster assembly 1 63 2.8E-33 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 PRINTS PR00147 DNA photolyase signature 353 371 2.4E-21 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 PRINTS PR00147 DNA photolyase signature 333 349 2.4E-21 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 PRINTS PR00147 DNA photolyase signature 392 406 2.4E-21 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 PRINTS PR00147 DNA photolyase signature 145 161 2.4E-21 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 PANTHER PTHR11455 6 486 1.5E-201 T 22-04-2016 JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 353 372 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 Pfam PF03441 FAD binding domain of DNA photolyase 284 482 9.2E-84 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 Gene3D G3DSA:3.40.50.620 5 168 3.6E-45 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 SUPERFAMILY SSF52425 9 216 2.88E-51 T 22-04-2016 IPR006050 DNA photolyase, N-terminal JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 Gene3D G3DSA:1.25.40.80 212 292 1.1E-36 T 22-04-2016 JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 Gene3D G3DSA:1.10.579.10 293 485 2.7E-80 T 22-04-2016 JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 Pfam PF00875 DNA photolyase 10 164 2.7E-48 T 22-04-2016 IPR006050 DNA photolyase, N-terminal JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 SUPERFAMILY SSF48173 198 485 1.15E-115 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain JE55_RS02485 2bff6ee39e95ffc3b896f354624a2fc6 486 PANTHER PTHR11455:SF18 6 486 1.5E-201 T 22-04-2016 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 SMART SM00448 10 125 1.0E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 SUPERFAMILY SSF52172 10 164 1.27E-35 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 SMART SM00421 149 206 1.7E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 SUPERFAMILY SSF46894 142 208 4.76E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 PANTHER PTHR26402:SF613 10 207 9.9E-67 T 22-04-2016 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 Gene3D G3DSA:3.40.50.2300 11 157 5.9E-37 T 22-04-2016 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 PANTHER PTHR26402 10 207 9.9E-67 T 22-04-2016 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 1.4E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 Pfam PF00072 Response regulator receiver domain 12 125 3.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 Gene3D G3DSA:1.10.10.10 158 209 1.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 3.3E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 3.3E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02235 03e9a6c26c2410635543fa048ab94d30 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 3.3E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02615 a2d55e5ebc249af2c0507fcaa40f06d6 162 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.5E-32 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type JE55_RS02615 a2d55e5ebc249af2c0507fcaa40f06d6 162 Gene3D G3DSA:1.10.10.10 1 132 1.7E-42 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02615 a2d55e5ebc249af2c0507fcaa40f06d6 162 PANTHER PTHR33221 2 131 2.5E-50 T 22-04-2016 JE55_RS02615 a2d55e5ebc249af2c0507fcaa40f06d6 162 SUPERFAMILY SSF46785 2 133 1.09E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02615 a2d55e5ebc249af2c0507fcaa40f06d6 162 PANTHER PTHR33221:SF4 2 131 2.5E-50 T 22-04-2016 JE55_RS02615 a2d55e5ebc249af2c0507fcaa40f06d6 162 Pfam PF02082 Transcriptional regulator 1 81 1.9E-24 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type JE55_RS03690 ab5ad4230662860100b2f69dcc134dfe 431 PANTHER PTHR23508:SF14 8 420 3.9E-255 T 22-04-2016 JE55_RS03690 ab5ad4230662860100b2f69dcc134dfe 431 SUPERFAMILY SSF103473 13 423 5.89E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS03690 ab5ad4230662860100b2f69dcc134dfe 431 Gene3D G3DSA:1.20.1250.20 240 424 8.9E-24 T 22-04-2016 JE55_RS03690 ab5ad4230662860100b2f69dcc134dfe 431 Gene3D G3DSA:1.20.1250.20 13 217 5.3E-25 T 22-04-2016 JE55_RS03690 ab5ad4230662860100b2f69dcc134dfe 431 PANTHER PTHR23508 8 420 3.9E-255 T 22-04-2016 JE55_RS03690 ab5ad4230662860100b2f69dcc134dfe 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS03690 ab5ad4230662860100b2f69dcc134dfe 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 294 311 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS03690 ab5ad4230662860100b2f69dcc134dfe 431 Pfam PF00083 Sugar (and other) transporter 20 414 1.0E-27 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JE55_RS02165 02966180acd0d6f0b51f2b587fa57810 135 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 6.0E-69 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 JE55_RS02165 02966180acd0d6f0b51f2b587fa57810 135 Gene3D G3DSA:3.90.1010.10 2 127 3.3E-56 T 22-04-2016 JE55_RS02165 02966180acd0d6f0b51f2b587fa57810 135 PANTHER PTHR10093:SF3 1 126 1.1E-95 T 22-04-2016 JE55_RS02165 02966180acd0d6f0b51f2b587fa57810 135 Pfam PF01592 NifU-like N terminal domain 3 126 4.2E-55 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 JE55_RS02165 02966180acd0d6f0b51f2b587fa57810 135 SUPERFAMILY SSF82649 2 125 2.15E-48 T 22-04-2016 JE55_RS02165 02966180acd0d6f0b51f2b587fa57810 135 PANTHER PTHR10093 1 126 1.1E-95 T 22-04-2016 JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 PANTHER PTHR23309:SF6 2 707 1.3E-284 T 22-04-2016 JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 Gene3D G3DSA:1.10.1040.10 496 591 7.6E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 PANTHER PTHR23309 2 707 1.3E-284 T 22-04-2016 JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 Gene3D G3DSA:3.40.50.720 304 495 2.6E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 SUPERFAMILY SSF52096 2 303 8.18E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 SUPERFAMILY SSF48179 619 707 2.47E-21 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 SUPERFAMILY SSF48179 493 596 2.21E-19 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 Gene3D G3DSA:3.90.226.10 231 288 2.8E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 Gene3D G3DSA:3.90.226.10 2 196 2.8E-56 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 590 1.3E-17 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 313 491 9.5E-59 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 Pfam PF00378 Enoyl-CoA hydratase/isomerase 21 193 4.8E-27 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 SUPERFAMILY SSF51735 310 492 1.56E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS08920 4bdbd0f6bafa2e98cfbc603f242f59be 707 Gene3D G3DSA:1.10.1040.10 629 706 1.2E-13 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS06205 0125696d5007bfb2185107606efa9e5b 407 PANTHER PTHR30258 17 399 2.2E-168 T 22-04-2016 JE55_RS06205 0125696d5007bfb2185107606efa9e5b 407 SUPERFAMILY SSF52540 14 402 9.06E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06205 0125696d5007bfb2185107606efa9e5b 407 PANTHER PTHR30258:SF1 17 399 2.2E-168 T 22-04-2016 JE55_RS06205 0125696d5007bfb2185107606efa9e5b 407 Gene3D G3DSA:3.40.50.300 135 404 3.0E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06205 0125696d5007bfb2185107606efa9e5b 407 Pfam PF00437 Type II/IV secretion system protein 33 295 7.2E-76 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 JE55_RS06205 0125696d5007bfb2185107606efa9e5b 407 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 223 237 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 JE55_RS06205 0125696d5007bfb2185107606efa9e5b 407 Gene3D G3DSA:3.30.450.90 13 127 2.0E-42 T 22-04-2016 JE55_RS06205 0125696d5007bfb2185107606efa9e5b 407 SMART SM00382 156 277 6.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS13920 060dd3afb86941d823ccb217527abac3 381 SUPERFAMILY SSF53756 31 373 4.08E-57 T 22-04-2016 JE55_RS13920 060dd3afb86941d823ccb217527abac3 381 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 180 324 9.9E-29 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 JE55_RS13920 060dd3afb86941d823ccb217527abac3 381 Gene3D G3DSA:3.40.50.2000 184 372 1.0E-43 T 22-04-2016 JE55_RS13920 060dd3afb86941d823ccb217527abac3 381 Gene3D G3DSA:3.40.50.2000 31 151 9.5E-13 T 22-04-2016 JE55_RS13920 060dd3afb86941d823ccb217527abac3 381 PANTHER PTHR30160 6 294 4.2E-27 T 22-04-2016 JE55_RS08140 f3a8372fd2224a3037a299d54b5479d9 553 Pfam PF01565 FAD binding domain 33 180 1.9E-11 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JE55_RS08140 f3a8372fd2224a3037a299d54b5479d9 553 Pfam PF08031 Berberine and berberine like 492 547 3.2E-11 T 22-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 JE55_RS08140 f3a8372fd2224a3037a299d54b5479d9 553 PANTHER PTHR11748 10 548 6.4E-83 T 22-04-2016 JE55_RS08140 f3a8372fd2224a3037a299d54b5479d9 553 Gene3D G3DSA:3.30.43.10 24 94 1.5E-7 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 JE55_RS08140 f3a8372fd2224a3037a299d54b5479d9 553 SUPERFAMILY SSF56176 20 227 8.41E-23 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS08140 f3a8372fd2224a3037a299d54b5479d9 553 PANTHER PTHR11748:SF33 10 548 6.4E-83 T 22-04-2016 JE55_RS14990 8167a2ed18a172599f1cdf85e9d726d8 299 Gene3D G3DSA:3.40.190.10 174 262 6.7E-27 T 22-04-2016 JE55_RS14990 8167a2ed18a172599f1cdf85e9d726d8 299 SUPERFAMILY SSF46785 4 84 2.98E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14990 8167a2ed18a172599f1cdf85e9d726d8 299 Pfam PF03466 LysR substrate binding domain 89 293 2.8E-43 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS14990 8167a2ed18a172599f1cdf85e9d726d8 299 PANTHER PTHR30537 1 295 1.7E-136 T 22-04-2016 JE55_RS14990 8167a2ed18a172599f1cdf85e9d726d8 299 SUPERFAMILY SSF53850 89 296 2.48E-46 T 22-04-2016 JE55_RS14990 8167a2ed18a172599f1cdf85e9d726d8 299 PANTHER PTHR30537:SF11 1 295 1.7E-136 T 22-04-2016 JE55_RS14990 8167a2ed18a172599f1cdf85e9d726d8 299 Gene3D G3DSA:3.40.190.10 90 173 5.1E-7 T 22-04-2016 JE55_RS14990 8167a2ed18a172599f1cdf85e9d726d8 299 Gene3D G3DSA:1.10.10.10 3 84 2.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14990 8167a2ed18a172599f1cdf85e9d726d8 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 3.7E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS07885 46db621fd6f5b93683dee2019071e737 270 Gene3D G3DSA:3.40.50.300 104 242 1.8E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07885 46db621fd6f5b93683dee2019071e737 270 PANTHER PTHR13696:SF3 3 253 2.1E-21 T 22-04-2016 JE55_RS07885 46db621fd6f5b93683dee2019071e737 270 PANTHER PTHR13696 3 253 2.1E-21 T 22-04-2016 JE55_RS07885 46db621fd6f5b93683dee2019071e737 270 SUPERFAMILY SSF52540 22 243 1.15E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07885 46db621fd6f5b93683dee2019071e737 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 24 177 1.0E-9 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS07885 46db621fd6f5b93683dee2019071e737 270 Gene3D G3DSA:3.40.50.300 21 57 1.9E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 Gene3D G3DSA:1.10.10.60 161 218 4.4E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 PANTHER PTHR11019:SF99 29 272 1.5E-77 T 22-04-2016 JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 Pfam PF02311 AraC-like ligand binding domain 32 143 2.6E-10 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 Gene3D G3DSA:1.10.10.60 226 266 2.0E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 248 2.8E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 264 2.8E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 SUPERFAMILY SSF46689 223 266 1.0E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 Pfam PF12833 Helix-turn-helix domain 188 266 4.2E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 SMART SM00342 182 264 2.5E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 Gene3D G3DSA:2.60.120.10 27 101 2.4E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 PANTHER PTHR11019 29 272 1.5E-77 T 22-04-2016 JE55_RS01390 28196fe63922d092ea1f69c672ed014f 287 SUPERFAMILY SSF51182 23 190 2.96E-17 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS03720 38bf5d1184aa0af16808f30f8ad680f2 458 PANTHER PTHR11119:SF31 16 458 9.4E-95 T 22-04-2016 JE55_RS03720 38bf5d1184aa0af16808f30f8ad680f2 458 Pfam PF00860 Permease family 31 419 4.4E-38 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS03720 38bf5d1184aa0af16808f30f8ad680f2 458 PANTHER PTHR11119 16 458 9.4E-95 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS16585 bc1656d46f568598a3163a946e325051 307 SUPERFAMILY SSF51735 6 154 6.15E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS16585 bc1656d46f568598a3163a946e325051 307 SUPERFAMILY SSF55347 131 292 1.62E-23 T 22-04-2016 JE55_RS16585 bc1656d46f568598a3163a946e325051 307 PANTHER PTHR22604:SF105 1 307 1.3E-53 T 22-04-2016 JE55_RS16585 bc1656d46f568598a3163a946e325051 307 PANTHER PTHR22604 1 307 1.3E-53 T 22-04-2016 JE55_RS16585 bc1656d46f568598a3163a946e325051 307 Gene3D G3DSA:3.40.50.720 6 146 5.2E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS16585 bc1656d46f568598a3163a946e325051 307 Gene3D G3DSA:3.30.360.10 147 307 4.4E-35 T 22-04-2016 JE55_RS16585 bc1656d46f568598a3163a946e325051 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 123 3.3E-21 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 JE55_RS28210 30007d95cd4ed68a48ecf8094f74c580 77 Gene3D G3DSA:3.40.47.10 15 75 7.8E-5 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS28210 30007d95cd4ed68a48ecf8094f74c580 77 SUPERFAMILY SSF53901 15 76 1.02E-5 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 SUPERFAMILY SSF51735 8 255 1.07E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 PANTHER PTHR24322:SF363 157 189 5.2E-36 T 22-04-2016 JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 PANTHER PTHR24322:SF363 12 141 5.2E-36 T 22-04-2016 JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 PANTHER PTHR24322 157 189 5.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 Pfam PF00106 short chain dehydrogenase 9 196 1.7E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 1.0E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.0E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.0E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.0E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 PANTHER PTHR24322 12 141 5.2E-36 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS05000 292c577b9a3af009611fdfdb6488caf3 262 Gene3D G3DSA:3.40.50.720 9 213 5.4E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07335 d80120759f7140208ff3f203c5c2c20d 122 SMART SM01374 1 122 1.2E-85 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JE55_RS07335 d80120759f7140208ff3f203c5c2c20d 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.7E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JE55_RS07335 d80120759f7140208ff3f203c5c2c20d 122 PANTHER PTHR11761 1 122 6.1E-74 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JE55_RS07335 d80120759f7140208ff3f203c5c2c20d 122 Gene3D G3DSA:2.40.150.20 1 122 3.8E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JE55_RS07335 d80120759f7140208ff3f203c5c2c20d 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site JE55_RS07335 d80120759f7140208ff3f203c5c2c20d 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.6E-57 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 JE55_RS07335 d80120759f7140208ff3f203c5c2c20d 122 SUPERFAMILY SSF50193 1 122 4.45E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JE55_RS07335 d80120759f7140208ff3f203c5c2c20d 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.142 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 JE55_RS00430 34decf7d2727251c879a4cfff53c5d50 99 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 2 95 4.5E-32 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 JE55_RS00430 34decf7d2727251c879a4cfff53c5d50 99 PIRSF PIRSF003135 1 97 3.8E-15 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 JE55_RS00430 34decf7d2727251c879a4cfff53c5d50 99 SUPERFAMILY SSF50249 1 97 6.68E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00430 34decf7d2727251c879a4cfff53c5d50 99 Gene3D G3DSA:2.40.50.140 2 98 4.5E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS12740 fc3688b2c9d52b7256a940ec8d69be5e 340 PANTHER PTHR21708 1 320 2.0E-78 T 22-04-2016 JE55_RS12740 fc3688b2c9d52b7256a940ec8d69be5e 340 Gene3D G3DSA:1.10.1040.10 183 317 1.8E-28 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS12740 fc3688b2c9d52b7256a940ec8d69be5e 340 PANTHER PTHR21708:SF27 1 320 2.0E-78 T 22-04-2016 JE55_RS12740 fc3688b2c9d52b7256a940ec8d69be5e 340 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 153 5.5E-33 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS12740 fc3688b2c9d52b7256a940ec8d69be5e 340 Gene3D G3DSA:3.40.50.720 2 182 1.6E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12740 fc3688b2c9d52b7256a940ec8d69be5e 340 SUPERFAMILY SSF51735 4 135 1.73E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12740 fc3688b2c9d52b7256a940ec8d69be5e 340 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 176 315 2.7E-21 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS12740 fc3688b2c9d52b7256a940ec8d69be5e 340 SUPERFAMILY SSF48179 176 316 1.5E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS12740 fc3688b2c9d52b7256a940ec8d69be5e 340 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 317 8.8E-60 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS05620 9cd4c2f460359a705af7b13a78ed00b0 122 PANTHER PTHR10072 17 122 1.4E-48 T 22-04-2016 JE55_RS05620 9cd4c2f460359a705af7b13a78ed00b0 122 Gene3D G3DSA:2.60.300.12 12 108 2.3E-34 T 22-04-2016 IPR000361 FeS cluster biogenesis JE55_RS05620 9cd4c2f460359a705af7b13a78ed00b0 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 122 6.4E-39 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 JE55_RS05620 9cd4c2f460359a705af7b13a78ed00b0 122 SUPERFAMILY SSF89360 15 108 4.51E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis JE55_RS05620 9cd4c2f460359a705af7b13a78ed00b0 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 19 117 6.5E-21 T 22-04-2016 IPR000361 FeS cluster biogenesis JE55_RS05620 9cd4c2f460359a705af7b13a78ed00b0 122 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 4 122 37.115 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 JE55_RS05620 9cd4c2f460359a705af7b13a78ed00b0 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site JE55_RS07050 10d59ad298fb0d645202d5635f0d9dd2 195 Pfam PF02470 MlaD protein 41 118 2.0E-23 T 22-04-2016 IPR003399 Mce/MlaD JE55_RS07050 10d59ad298fb0d645202d5635f0d9dd2 195 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 5 149 5.1E-60 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 JE55_RS07050 10d59ad298fb0d645202d5635f0d9dd2 195 PANTHER PTHR33371 1 148 3.8E-42 T 22-04-2016 JE55_RS01920 120e53e4c713f39b1cfb5b3888b12bcc 195 SUPERFAMILY SSF57938 115 145 5.75E-5 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 JE55_RS01920 120e53e4c713f39b1cfb5b3888b12bcc 195 Gene3D G3DSA:2.10.230.10 115 146 5.8E-5 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 PANTHER PTHR26402 3 225 2.6E-73 T 22-04-2016 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 ProSitePatterns PS00622 LuxR-type HTH domain signature. 180 207 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 SMART SM00421 163 220 6.9E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 Gene3D G3DSA:3.40.50.2300 2 165 9.3E-37 T 22-04-2016 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 Pfam PF00072 Response regulator receiver domain 5 116 3.9E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 SUPERFAMILY SSF52172 2 130 5.69E-34 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 SUPERFAMILY SSF46894 154 226 5.1E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 SMART SM00448 3 116 1.5E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 3.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 3.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 3.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 Gene3D G3DSA:1.10.10.10 166 225 2.5E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 PANTHER PTHR26402:SF151 3 225 2.6E-73 T 22-04-2016 JE55_RS02295 68c63438e54eb8add7e0e86c25c451ae 233 Pfam PF00196 Bacterial regulatory proteins, luxR family 164 220 3.2E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 PANTHER PTHR30126 1 298 9.1E-73 T 22-04-2016 JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 Gene3D G3DSA:1.10.10.10 1 81 1.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 SUPERFAMILY SSF53850 90 298 4.59E-38 T 22-04-2016 JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 Gene3D G3DSA:3.40.190.10 173 268 2.5E-27 T 22-04-2016 JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 Pfam PF03466 LysR substrate binding domain 87 297 1.2E-42 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 SUPERFAMILY SSF46785 1 111 2.63E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.3E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.3E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.3E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.8E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 PANTHER PTHR30126:SF11 1 298 9.1E-73 T 22-04-2016 JE55_RS18095 e533470b5b172031a6d4d6089b56ee15 300 Gene3D G3DSA:3.40.190.10 89 172 8.9E-15 T 22-04-2016 JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 PANTHER PTHR30154 1 157 1.6E-51 T 22-04-2016 JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.4E-9 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.4E-9 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.4E-9 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 SUPERFAMILY SSF46785 2 94 5.4E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 Gene3D G3DSA:3.30.70.920 57 153 3.1E-29 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 SUPERFAMILY SSF54909 64 153 1.15E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 SMART SM00344 4 113 1.6E-29 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 PANTHER PTHR30154:SF28 1 157 1.6E-51 T 22-04-2016 JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 Pfam PF01037 Lrp/AsnC ligand binding domain 73 143 2.0E-21 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 Pfam PF13404 AsnC-type helix-turn-helix domain 4 45 8.9E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS08555 670166ad317e9c531e13523efdb6957a 163 Gene3D G3DSA:1.10.10.10 2 55 4.3E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 SUPERFAMILY SSF82693 564 667 1.41E-25 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 Gene3D G3DSA:3.30.2090.10 180 273 2.8E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 Gene3D G3DSA:3.30.2090.10 718 808 6.5E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 Gene3D G3DSA:1.20.1640.10 291 505 7.4E-57 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 SUPERFAMILY SSF82866 803 1025 9.55E-42 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 PANTHER PTHR32063:SF13 1 1027 0.0 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 Gene3D G3DSA:1.10.3850.10 811 1024 1.4E-52 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 469 492 6.0E-102 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 444 467 6.0E-102 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 6.0E-102 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 6.0E-102 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.0E-102 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 6.0E-102 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 551 568 6.0E-102 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 6.0E-102 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.0E-102 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 Pfam PF00873 AcrB/AcrD/AcrF family 1 1022 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 PANTHER PTHR32063 1 1027 0.0 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 SUPERFAMILY SSF82866 295 496 2.22E-49 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 Gene3D G3DSA:3.30.70.1430 38 137 3.2E-28 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 SUPERFAMILY SSF82714 719 805 9.42E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 SUPERFAMILY SSF82714 181 270 1.57E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 Gene3D G3DSA:3.30.70.1430 566 667 5.6E-27 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 SUPERFAMILY SSF82693 136 181 6.8E-24 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 SUPERFAMILY SSF82693 273 328 6.8E-24 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 SUPERFAMILY SSF82693 38 128 4.19E-23 T 22-04-2016 JE55_RS16945 438eea513e9f1f2313744872ae1148c6 1043 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1029 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 JE55_RS18020 514e96ce27174862b51d92f80f2986e9 153 SMART SM00344 9 115 2.3E-23 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JE55_RS18020 514e96ce27174862b51d92f80f2986e9 153 Pfam PF13404 AsnC-type helix-turn-helix domain 9 50 2.1E-15 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS18020 514e96ce27174862b51d92f80f2986e9 153 SUPERFAMILY SSF54909 71 151 1.61E-16 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS18020 514e96ce27174862b51d92f80f2986e9 153 PANTHER PTHR30154 1 150 4.7E-39 T 22-04-2016 JE55_RS18020 514e96ce27174862b51d92f80f2986e9 153 Pfam PF01037 Lrp/AsnC ligand binding domain 77 144 1.3E-14 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS18020 514e96ce27174862b51d92f80f2986e9 153 Gene3D G3DSA:3.30.70.920 73 144 3.3E-19 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS18020 514e96ce27174862b51d92f80f2986e9 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 36 55 7.3E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS18020 514e96ce27174862b51d92f80f2986e9 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 9 25 7.3E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS18020 514e96ce27174862b51d92f80f2986e9 153 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 36 7.3E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS18020 514e96ce27174862b51d92f80f2986e9 153 Gene3D G3DSA:1.10.10.10 8 59 1.6E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS18020 514e96ce27174862b51d92f80f2986e9 153 SUPERFAMILY SSF46785 8 65 2.35E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS22965 885d79584209f6b9272af78409e52ae1 273 SUPERFAMILY SSF159283 208 272 1.7E-19 T 22-04-2016 JE55_RS22965 885d79584209f6b9272af78409e52ae1 273 Pfam PF01050 Mannose-6-phosphate isomerase 239 272 9.4E-8 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 JE55_RS22965 885d79584209f6b9272af78409e52ae1 273 PANTHER PTHR12526:SF357 75 213 2.9E-45 T 22-04-2016 JE55_RS22965 885d79584209f6b9272af78409e52ae1 273 Pfam PF00483 Nucleotidyl transferase 2 211 5.4E-41 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 JE55_RS22965 885d79584209f6b9272af78409e52ae1 273 Gene3D G3DSA:3.90.550.10 1 195 3.9E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS22965 885d79584209f6b9272af78409e52ae1 273 PANTHER PTHR12526 75 213 2.9E-45 T 22-04-2016 JE55_RS22965 885d79584209f6b9272af78409e52ae1 273 SUPERFAMILY SSF53448 1 204 3.26E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS03915 08000335a7fabdeae9c2b5c107e87b86 164 Gene3D G3DSA:3.30.1150.10 41 154 5.0E-22 T 22-04-2016 JE55_RS03915 08000335a7fabdeae9c2b5c107e87b86 164 Pfam PF13103 TonB C terminal 52 127 5.2E-6 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 JE55_RS03915 08000335a7fabdeae9c2b5c107e87b86 164 SUPERFAMILY SSF74653 34 149 3.43E-16 T 22-04-2016 JE55_RS03915 08000335a7fabdeae9c2b5c107e87b86 164 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 82 134 5.7E-8 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 JE55_RS11515 83923bed7dd1dffa10ebe17d9d89ee37 297 PANTHER PTHR30514 11 285 1.5E-47 T 22-04-2016 JE55_RS11515 83923bed7dd1dffa10ebe17d9d89ee37 297 SUPERFAMILY SSF46689 10 82 6.63E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS11515 83923bed7dd1dffa10ebe17d9d89ee37 297 PANTHER PTHR30514:SF1 11 285 1.5E-47 T 22-04-2016 JE55_RS11515 83923bed7dd1dffa10ebe17d9d89ee37 297 Gene3D G3DSA:1.10.10.10 11 83 1.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11515 83923bed7dd1dffa10ebe17d9d89ee37 297 Pfam PF01380 SIS domain 134 262 1.5E-15 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS11515 83923bed7dd1dffa10ebe17d9d89ee37 297 Gene3D G3DSA:3.40.50.10490 106 280 1.3E-26 T 22-04-2016 JE55_RS11515 83923bed7dd1dffa10ebe17d9d89ee37 297 Pfam PF01418 Helix-turn-helix domain, rpiR family 14 84 4.9E-13 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 JE55_RS11515 83923bed7dd1dffa10ebe17d9d89ee37 297 SUPERFAMILY SSF53697 110 287 9.07E-33 T 22-04-2016 JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 187 1.5E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 Gene3D G3DSA:3.40.50.300 410 474 3.8E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 SMART SM00382 50 195 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 Gene3D G3DSA:3.40.50.300 11 194 5.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 PANTHER PTHR11638 1 368 2.1E-293 T 22-04-2016 JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 SUPERFAMILY SSF52540 11 402 5.07E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 SUPERFAMILY SSF52540 404 474 7.02E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 PANTHER PTHR11638:SF18 1 368 2.1E-293 T 22-04-2016 JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 PANTHER PTHR11638:SF18 384 474 2.1E-293 T 22-04-2016 JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 Gene3D G3DSA:1.10.8.60 195 280 2.2E-37 T 22-04-2016 JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 PANTHER PTHR11638 384 474 2.1E-293 T 22-04-2016 JE55_RS18555 bd048bdfeebffc93224220d856d9776e 474 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 146 158 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 JE55_RS08495 d8d5d9452ef2c0c9b2402b14f321461f 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 114 335 1.7E-17 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS08495 d8d5d9452ef2c0c9b2402b14f321461f 351 PANTHER PTHR11795 118 350 7.3E-139 T 22-04-2016 JE55_RS08495 d8d5d9452ef2c0c9b2402b14f321461f 351 PANTHER PTHR11795 1 57 7.3E-139 T 22-04-2016 JE55_RS08495 d8d5d9452ef2c0c9b2402b14f321461f 351 PANTHER PTHR11795:SF402 118 350 7.3E-139 T 22-04-2016 JE55_RS08495 d8d5d9452ef2c0c9b2402b14f321461f 351 PANTHER PTHR11795:SF402 1 57 7.3E-139 T 22-04-2016 JE55_RS12980 e386e24ad662f5e36a362c6a849d85d7 394 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 216 253 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS12980 e386e24ad662f5e36a362c6a849d85d7 394 PANTHER PTHR11986:SF88 9 391 1.6E-167 T 22-04-2016 JE55_RS12980 e386e24ad662f5e36a362c6a849d85d7 394 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 8 392 41.353 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 JE55_RS12980 e386e24ad662f5e36a362c6a849d85d7 394 PIRSF PIRSF000521 19 394 2.5E-44 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS12980 e386e24ad662f5e36a362c6a849d85d7 394 Pfam PF00202 Aminotransferase class-III 19 391 6.4E-103 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS12980 e386e24ad662f5e36a362c6a849d85d7 394 Gene3D G3DSA:3.40.640.10 56 293 1.4E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS12980 e386e24ad662f5e36a362c6a849d85d7 394 Gene3D G3DSA:3.90.1150.10 299 393 1.4E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS12980 e386e24ad662f5e36a362c6a849d85d7 394 Gene3D G3DSA:3.90.1150.10 14 54 1.4E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS12980 e386e24ad662f5e36a362c6a849d85d7 394 PANTHER PTHR11986 9 391 1.6E-167 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS12980 e386e24ad662f5e36a362c6a849d85d7 394 SUPERFAMILY SSF53383 7 392 1.18E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS12980 e386e24ad662f5e36a362c6a849d85d7 394 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 12 391 1.4E-123 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 JE55_RS02105 ebd0270fee435ee92a3cc369f3b541d9 249 PANTHER PTHR24220:SF111 25 244 1.6E-109 T 22-04-2016 JE55_RS02105 ebd0270fee435ee92a3cc369f3b541d9 249 SUPERFAMILY SSF52540 23 244 6.72E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02105 ebd0270fee435ee92a3cc369f3b541d9 249 Gene3D G3DSA:3.40.50.300 23 244 4.4E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02105 ebd0270fee435ee92a3cc369f3b541d9 249 SMART SM00382 52 238 5.4E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS02105 ebd0270fee435ee92a3cc369f3b541d9 249 Pfam PF00005 ABC transporter 43 191 1.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS02105 ebd0270fee435ee92a3cc369f3b541d9 249 PANTHER PTHR24220 25 244 1.6E-109 T 22-04-2016 JE55_RS02105 ebd0270fee435ee92a3cc369f3b541d9 249 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS02105 ebd0270fee435ee92a3cc369f3b541d9 249 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 23 242 7.8E-96 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 5 16 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 SUPERFAMILY SSF52313 5 231 1.44E-90 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 Gene3D G3DSA:1.10.287.610 99 151 5.0E-21 T 22-04-2016 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 Pfam PF00318 Ribosomal protein S2 8 223 2.6E-90 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 PANTHER PTHR12534 1 225 4.6E-104 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 8.0E-98 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 Gene3D G3DSA:3.40.50.10490 157 241 5.6E-62 T 22-04-2016 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 Gene3D G3DSA:3.40.50.10490 22 98 5.6E-62 T 22-04-2016 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 PRINTS PR00395 Ribosomal protein S2 signature 157 174 4.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 PRINTS PR00395 Ribosomal protein S2 signature 5 23 4.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 PRINTS PR00395 Ribosomal protein S2 signature 86 103 4.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 PRINTS PR00395 Ribosomal protein S2 signature 195 209 4.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 PRINTS PR00395 Ribosomal protein S2 signature 174 185 4.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 PRINTS PR00395 Ribosomal protein S2 signature 36 45 4.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS01195 ade58c127bb168e84bb37c4fcfc542b1 246 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 39.831 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 234 305 2.1E-12 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 14 303 4.4E-101 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 Gene3D G3DSA:3.30.160.40 229 315 4.5E-20 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 Gene3D G3DSA:3.40.190.10 119 207 1.2E-38 T 22-04-2016 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 PRINTS PR00151 Porphobilinogen deaminase signature 84 103 3.4E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 PRINTS PR00151 Porphobilinogen deaminase signature 238 255 3.4E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 PRINTS PR00151 Porphobilinogen deaminase signature 132 149 3.4E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 PRINTS PR00151 Porphobilinogen deaminase signature 151 168 3.4E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 PRINTS PR00151 Porphobilinogen deaminase signature 53 73 3.4E-46 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 PANTHER PTHR11557 12 316 1.2E-134 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 239 255 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 PANTHER PTHR11557:SF0 12 316 1.2E-134 T 22-04-2016 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 Gene3D G3DSA:3.40.190.10 13 118 1.0E-47 T 22-04-2016 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 SUPERFAMILY SSF54782 228 317 2.35E-19 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 14 219 2.7E-75 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 SUPERFAMILY SSF53850 13 227 2.5E-80 T 22-04-2016 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 PIRSF PIRSF001438 2 323 2.6E-113 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13370 65b857f9185de38b4a339a3b926b9ad6 329 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 13 308 37.141 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 Gene3D G3DSA:3.40.50.300 31 272 1.4E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 Pfam PF00270 DEAD/DEAH box helicase 64 251 1.5E-47 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 PANTHER PTHR24031:SF261 134 513 2.9E-179 T 22-04-2016 JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 PANTHER PTHR24031:SF261 41 117 2.9E-179 T 22-04-2016 JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 214 222 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 SMART SM00490 320 401 3.2E-32 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 SUPERFAMILY SSF52540 137 421 1.33E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 Gene3D G3DSA:3.40.50.300 273 429 7.8E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 SMART SM00487 59 283 1.6E-55 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 Pfam PF00271 Helicase conserved C-terminal domain 297 401 2.3E-26 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 PANTHER PTHR24031 134 513 2.9E-179 T 22-04-2016 JE55_RS01350 cc4d72c9c696ea59b550f6958d21e610 513 PANTHER PTHR24031 41 117 2.9E-179 T 22-04-2016 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 Pfam PF00206 Lyase 513 721 2.3E-34 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 PANTHER PTHR11444 508 819 1.2E-66 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 PRINTS PR00149 Fumarate lyase superfamily signature 652 679 1.4E-17 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 PRINTS PR00149 Fumarate lyase superfamily signature 523 541 1.4E-17 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 PRINTS PR00149 Fumarate lyase superfamily signature 568 586 1.4E-17 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 PRINTS PR00149 Fumarate lyase superfamily signature 696 712 1.4E-17 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 PANTHER PTHR11444:SF3 508 819 1.2E-66 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 ProSitePatterns PS00163 Fumarate lyases signature. 696 705 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 SUPERFAMILY SSF56059 103 331 4.65E-38 T 22-04-2016 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 Pfam PF13535 ATP-grasp domain 147 296 2.6E-17 T 22-04-2016 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 Gene3D G3DSA:1.20.200.10 528 808 2.3E-63 T 22-04-2016 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 PRINTS PR00145 Argininosuccinate lyase family signature 522 544 7.5E-25 T 22-04-2016 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 PRINTS PR00145 Argininosuccinate lyase family signature 652 676 7.5E-25 T 22-04-2016 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 PRINTS PR00145 Argininosuccinate lyase family signature 614 630 7.5E-25 T 22-04-2016 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 PRINTS PR00145 Argininosuccinate lyase family signature 563 583 7.5E-25 T 22-04-2016 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 PRINTS PR00145 Argininosuccinate lyase family signature 696 712 7.5E-25 T 22-04-2016 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 SUPERFAMILY SSF48557 451 830 1.88E-82 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 JE55_RS17430 854fa13d3130809c353e1e16a26a910e 900 Gene3D G3DSA:3.30.470.20 104 338 4.7E-30 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS18065 d51885c915133105009868db55d3e7de 347 SUPERFAMILY SSF53822 69 337 3.0E-47 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS18065 d51885c915133105009868db55d3e7de 347 Pfam PF13377 Periplasmic binding protein-like domain 180 345 1.6E-16 T 22-04-2016 JE55_RS18065 d51885c915133105009868db55d3e7de 347 PANTHER PTHR30146 10 346 1.1E-77 T 22-04-2016 JE55_RS18065 d51885c915133105009868db55d3e7de 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 59 1.2E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS18065 d51885c915133105009868db55d3e7de 347 Gene3D G3DSA:1.10.260.40 12 64 2.5E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS18065 d51885c915133105009868db55d3e7de 347 SUPERFAMILY SSF47413 12 69 1.29E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS18065 d51885c915133105009868db55d3e7de 347 Gene3D G3DSA:3.40.50.2300 183 326 3.7E-19 T 22-04-2016 JE55_RS18065 d51885c915133105009868db55d3e7de 347 SMART SM00354 11 82 3.0E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS18065 d51885c915133105009868db55d3e7de 347 Gene3D G3DSA:3.40.50.2300 65 182 3.8E-37 T 22-04-2016 JE55_RS10720 4fbd7850cd46829769485fc3aa359aa3 156 PANTHER PTHR12029:SF31 1 154 3.1E-73 T 22-04-2016 JE55_RS10720 4fbd7850cd46829769485fc3aa359aa3 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 153 33.232 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 JE55_RS10720 4fbd7850cd46829769485fc3aa359aa3 156 PANTHER PTHR12029 1 154 3.1E-73 T 22-04-2016 JE55_RS10720 4fbd7850cd46829769485fc3aa359aa3 156 Pfam PF00588 SpoU rRNA Methylase family 2 143 2.8E-30 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JE55_RS10720 4fbd7850cd46829769485fc3aa359aa3 156 Gene3D G3DSA:3.40.1280.10 1 155 2.5E-64 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS10720 4fbd7850cd46829769485fc3aa359aa3 156 PIRSF PIRSF029256 1 156 1.5E-63 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 JE55_RS10720 4fbd7850cd46829769485fc3aa359aa3 156 SUPERFAMILY SSF75217 1 153 1.9E-41 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases JE55_RS10720 4fbd7850cd46829769485fc3aa359aa3 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 2.8E-58 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PANTHER PTHR10422 33 615 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 648 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 279 333 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 501 3.4E-138 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 Gene3D G3DSA:1.20.210.10 38 590 1.3E-184 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PANTHER PTHR10422:SF26 33 615 0.0 T 22-04-2016 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 197 215 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 96 119 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 177 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 368 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 226 245 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 460 481 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 382 400 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 123 147 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 298 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 410 429 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 338 1.9E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02635 e2413ff07789da78dffbeeafea482a6a 668 SUPERFAMILY SSF81442 43 559 3.01E-175 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS08675 0fd9a3fa8990c2c518d7e0bc6c9d142e 242 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 33 53 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08675 0fd9a3fa8990c2c518d7e0bc6c9d142e 242 Pfam PF13633 Prokaryotic N-terminal methylation site 33 57 6.7E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08675 0fd9a3fa8990c2c518d7e0bc6c9d142e 242 SUPERFAMILY SSF54523 35 121 5.1E-9 T 22-04-2016 JE55_RS08675 0fd9a3fa8990c2c518d7e0bc6c9d142e 242 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 33 52 8.4E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS07315 71f761f2babeb4fd194134e21cbf86d8 131 Gene3D G3DSA:3.30.1370.30 2 72 5.0E-30 T 22-04-2016 JE55_RS07315 71f761f2babeb4fd194134e21cbf86d8 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.638 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 JE55_RS07315 71f761f2babeb4fd194134e21cbf86d8 131 PANTHER PTHR11758 1 131 1.8E-61 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 JE55_RS07315 71f761f2babeb4fd194134e21cbf86d8 131 Gene3D G3DSA:3.30.1490.10 75 130 5.4E-28 T 22-04-2016 JE55_RS07315 71f761f2babeb4fd194134e21cbf86d8 131 SUPERFAMILY SSF56047 2 130 2.88E-48 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 JE55_RS07315 71f761f2babeb4fd194134e21cbf86d8 131 Pfam PF00410 Ribosomal protein S8 5 130 5.8E-51 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 JE55_RS07315 71f761f2babeb4fd194134e21cbf86d8 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 55 490 3.2E-154 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 Gene3D G3DSA:2.40.10.10 54 189 1.6E-36 T 22-04-2016 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 PANTHER PTHR22939 18 76 1.3E-117 T 22-04-2016 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 PANTHER PTHR22939 109 407 1.3E-117 T 22-04-2016 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 SUPERFAMILY SSF50156 257 381 2.63E-27 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 Gene3D G3DSA:2.30.42.10 409 493 1.2E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 Gene3D G3DSA:2.40.10.10 190 301 3.9E-44 T 22-04-2016 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 Gene3D G3DSA:2.30.42.10 302 397 1.2E-31 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 SUPERFAMILY SSF50494 52 290 4.27E-66 T 22-04-2016 IPR009003 Peptidase S1, PA clan JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 SUPERFAMILY SSF50156 409 493 1.45E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 PRINTS PR00834 HtrA/DegQ protease family signature 339 351 4.7E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 PRINTS PR00834 HtrA/DegQ protease family signature 253 270 4.7E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 PRINTS PR00834 HtrA/DegQ protease family signature 197 221 4.7E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 PRINTS PR00834 HtrA/DegQ protease family signature 136 148 4.7E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 PRINTS PR00834 HtrA/DegQ protease family signature 157 177 4.7E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 PRINTS PR00834 HtrA/DegQ protease family signature 231 248 4.7E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 Pfam PF13365 Trypsin-like peptidase domain 127 260 1.3E-36 T 22-04-2016 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 Pfam PF13180 PDZ domain 409 492 7.8E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 Pfam PF13180 PDZ domain 300 390 5.4E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 SMART SM00228 299 381 2.7E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 SMART SM00228 409 485 2.2E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 PANTHER PTHR22939:SF98 18 76 1.3E-117 T 22-04-2016 JE55_RS12335 9afd5d7b84970cd38d6038af9a49d3cd 495 PANTHER PTHR22939:SF98 109 407 1.3E-117 T 22-04-2016 JE55_RS03930 2b607a669838f575a48b4cf02229b5ff 340 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 325 1.8E-102 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 JE55_RS03930 2b607a669838f575a48b4cf02229b5ff 340 Gene3D G3DSA:3.40.50.2000 2 137 2.0E-35 T 22-04-2016 JE55_RS03930 2b607a669838f575a48b4cf02229b5ff 340 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 79 297 1.3E-42 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 JE55_RS03930 2b607a669838f575a48b4cf02229b5ff 340 PANTHER PTHR30160:SF8 3 290 8.4E-50 T 22-04-2016 JE55_RS03930 2b607a669838f575a48b4cf02229b5ff 340 PANTHER PTHR30160 3 290 8.4E-50 T 22-04-2016 JE55_RS03930 2b607a669838f575a48b4cf02229b5ff 340 Gene3D G3DSA:3.40.50.2000 181 303 1.8E-34 T 22-04-2016 JE55_RS03930 2b607a669838f575a48b4cf02229b5ff 340 SUPERFAMILY SSF53756 2 325 3.66E-71 T 22-04-2016 JE55_RS07620 0b03c54c542ded6151fc02397a053e00 276 SUPERFAMILY SSF56925 203 276 2.62E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS07620 0b03c54c542ded6151fc02397a053e00 276 SUPERFAMILY SSF56925 131 176 2.62E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS07620 0b03c54c542ded6151fc02397a053e00 276 SUPERFAMILY SSF56925 68 105 2.62E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS07620 0b03c54c542ded6151fc02397a053e00 276 PANTHER PTHR36920:SF1 206 276 2.2E-19 T 22-04-2016 JE55_RS07620 0b03c54c542ded6151fc02397a053e00 276 PANTHER PTHR36920:SF1 1 51 2.2E-19 T 22-04-2016 JE55_RS07620 0b03c54c542ded6151fc02397a053e00 276 PANTHER PTHR36920:SF1 67 187 2.2E-19 T 22-04-2016 JE55_RS07620 0b03c54c542ded6151fc02397a053e00 276 Gene3D G3DSA:2.40.160.20 22 276 6.4E-63 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS07620 0b03c54c542ded6151fc02397a053e00 276 PANTHER PTHR36920 206 276 2.2E-19 T 22-04-2016 JE55_RS07620 0b03c54c542ded6151fc02397a053e00 276 PANTHER PTHR36920 1 51 2.2E-19 T 22-04-2016 JE55_RS07620 0b03c54c542ded6151fc02397a053e00 276 PANTHER PTHR36920 67 187 2.2E-19 T 22-04-2016 JE55_RS07620 0b03c54c542ded6151fc02397a053e00 276 Pfam PF03922 OmpW family 66 276 1.9E-21 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 JE55_RS03545 843f0ebb032fa5f632abf2e8cb4c3472 427 SUPERFAMILY SSF53955 83 401 3.94E-77 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS03545 843f0ebb032fa5f632abf2e8cb4c3472 427 SUPERFAMILY SSF81995 36 87 9.15E-5 T 22-04-2016 JE55_RS03545 843f0ebb032fa5f632abf2e8cb4c3472 427 PANTHER PTHR30163:SF0 12 403 1.0E-107 T 22-04-2016 JE55_RS03545 843f0ebb032fa5f632abf2e8cb4c3472 427 Gene3D G3DSA:1.10.530.10 134 189 2.1E-52 T 22-04-2016 JE55_RS03545 843f0ebb032fa5f632abf2e8cb4c3472 427 Gene3D G3DSA:1.10.530.10 277 402 2.1E-52 T 22-04-2016 JE55_RS03545 843f0ebb032fa5f632abf2e8cb4c3472 427 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 93 398 4.1E-107 T 22-04-2016 IPR011757 Lytic transglycosylase MltB JE55_RS03545 843f0ebb032fa5f632abf2e8cb4c3472 427 PANTHER PTHR30163 12 403 1.0E-107 T 22-04-2016 IPR011757 Lytic transglycosylase MltB JE55_RS03545 843f0ebb032fa5f632abf2e8cb4c3472 427 Pfam PF13406 Transglycosylase SLT domain 88 395 1.1E-85 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 JE55_RS15715 f56cc3b35551f29671d446ea4c62f3ac 327 PANTHER PTHR35563:SF1 20 320 1.4E-53 T 22-04-2016 JE55_RS15715 f56cc3b35551f29671d446ea4c62f3ac 327 Gene3D G3DSA:3.20.20.140 49 323 1.9E-91 T 22-04-2016 JE55_RS15715 f56cc3b35551f29671d446ea4c62f3ac 327 SUPERFAMILY SSF51556 51 319 2.52E-74 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS15715 f56cc3b35551f29671d446ea4c62f3ac 327 Pfam PF04909 Amidohydrolase 55 318 8.2E-34 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 JE55_RS15715 f56cc3b35551f29671d446ea4c62f3ac 327 PANTHER PTHR35563 20 320 1.4E-53 T 22-04-2016 JE55_RS11650 dffc0d3a24f8832d14eb49544899afb6 623 PANTHER PTHR24221 18 618 3.0E-303 T 22-04-2016 JE55_RS11650 dffc0d3a24f8832d14eb49544899afb6 623 Gene3D G3DSA:1.20.1560.10 26 350 3.8E-67 T 22-04-2016 JE55_RS11650 dffc0d3a24f8832d14eb49544899afb6 623 SUPERFAMILY SSF52540 366 609 3.29E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11650 dffc0d3a24f8832d14eb49544899afb6 623 SMART SM00382 396 585 1.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS11650 dffc0d3a24f8832d14eb49544899afb6 623 Pfam PF00664 ABC transporter transmembrane region 39 323 2.2E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS11650 dffc0d3a24f8832d14eb49544899afb6 623 Pfam PF00005 ABC transporter 387 539 3.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS11650 dffc0d3a24f8832d14eb49544899afb6 623 PANTHER PTHR24221:SF18 18 618 3.0E-303 T 22-04-2016 JE55_RS11650 dffc0d3a24f8832d14eb49544899afb6 623 Gene3D G3DSA:3.40.50.300 371 605 2.8E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11650 dffc0d3a24f8832d14eb49544899afb6 623 SUPERFAMILY SSF90123 25 345 1.12E-61 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS11650 dffc0d3a24f8832d14eb49544899afb6 623 ProSitePatterns PS00211 ABC transporters family signature. 511 525 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PANTHER PTHR22939 101 287 1.6E-67 T 22-04-2016 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PANTHER PTHR22939 40 76 1.6E-67 T 22-04-2016 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 Gene3D G3DSA:2.30.42.10 311 399 1.1E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 Gene3D G3DSA:2.30.42.10 430 513 9.1E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 Gene3D G3DSA:2.40.10.10 106 183 4.7E-28 T 22-04-2016 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 Gene3D G3DSA:2.40.10.10 52 74 4.7E-28 T 22-04-2016 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 SMART SM00228 321 392 3.7E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 SMART SM00228 429 505 1.6E-5 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 1.1E-28 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PRINTS PR00834 HtrA/DegQ protease family signature 149 169 1.1E-28 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PRINTS PR00834 HtrA/DegQ protease family signature 350 362 1.1E-28 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PRINTS PR00834 HtrA/DegQ protease family signature 128 140 1.1E-28 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 1.1E-28 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PRINTS PR00834 HtrA/DegQ protease family signature 189 213 1.1E-28 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 SUPERFAMILY SSF50494 52 281 2.5E-48 T 22-04-2016 IPR009003 Peptidase S1, PA clan JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 SUPERFAMILY SSF50156 332 448 2.1E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PANTHER PTHR22939:SF98 101 287 1.6E-67 T 22-04-2016 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PANTHER PTHR22939:SF98 307 399 1.6E-67 T 22-04-2016 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 SUPERFAMILY SSF50156 430 513 3.02E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PANTHER PTHR22939 307 399 1.6E-67 T 22-04-2016 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 Pfam PF13365 Trypsin-like peptidase domain 119 252 9.0E-28 T 22-04-2016 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 Pfam PF13180 PDZ domain 431 513 1.9E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 Pfam PF13180 PDZ domain 312 396 2.5E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 Gene3D G3DSA:2.40.10.10 184 290 2.2E-30 T 22-04-2016 JE55_RS15855 cb1435a5393b137c6afa6382a874b154 515 PANTHER PTHR22939:SF98 40 76 1.6E-67 T 22-04-2016 JE55_RS11155 fa30fe5755b3ab5d91ef5d0ef1df4c58 322 Gene3D G3DSA:3.40.1390.20 12 138 5.6E-34 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like JE55_RS11155 fa30fe5755b3ab5d91ef5d0ef1df4c58 322 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 13 308 2.2E-93 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 JE55_RS11155 fa30fe5755b3ab5d91ef5d0ef1df4c58 322 Gene3D G3DSA:3.40.50.300 141 311 2.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11155 fa30fe5755b3ab5d91ef5d0ef1df4c58 322 SUPERFAMILY SSF75138 12 139 2.88E-29 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like JE55_RS11155 fa30fe5755b3ab5d91ef5d0ef1df4c58 322 PANTHER PTHR30305:SF1 1 317 2.4E-87 T 22-04-2016 JE55_RS11155 fa30fe5755b3ab5d91ef5d0ef1df4c58 322 Pfam PF02603 HPr Serine kinase N terminus 7 134 5.2E-22 T 22-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 JE55_RS11155 fa30fe5755b3ab5d91ef5d0ef1df4c58 322 PANTHER PTHR30305 1 317 2.4E-87 T 22-04-2016 JE55_RS11155 fa30fe5755b3ab5d91ef5d0ef1df4c58 322 SUPERFAMILY SSF53795 140 306 1.89E-35 T 22-04-2016 JE55_RS11155 fa30fe5755b3ab5d91ef5d0ef1df4c58 322 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 5 313 35.721 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 JE55_RS11155 fa30fe5755b3ab5d91ef5d0ef1df4c58 322 Pfam PF07475 HPr Serine kinase C-terminal domain 139 305 3.1E-60 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 382 499 1.3E-19 T 22-04-2016 IPR032821 Ketoacyl-synthetase, C-terminal extension JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SMART SM01294 2421 2487 0.0061 T 22-04-2016 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Gene3D G3DSA:3.40.47.10 3 265 1.0E-100 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Gene3D G3DSA:3.40.50.720 1937 2030 3.1E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF53335 1453 1555 1.56E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF53335 1383 1420 1.56E-10 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Pfam PF08659 KR domain 2139 2319 4.1E-60 T 22-04-2016 IPR013968 Polyketide synthase, ketoreductase domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF51735 1904 2058 2.12E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Gene3D G3DSA:3.90.180.10 1794 1936 2.3E-40 T 22-04-2016 IPR011032 GroES-like JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 1932 1953 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF50129 1797 1937 2.04E-26 T 22-04-2016 IPR011032 GroES-like JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 253 2.0E-89 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Gene3D G3DSA:1.10.1200.10 2422 2491 1.4E-9 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF53901 4 372 6.39E-98 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF53901 408 428 6.39E-98 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Pfam PF00550 Phosphopantetheine attachment site 2423 2486 8.8E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 166 182 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF51735 1591 1776 1.65E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF52151 539 676 2.62E-60 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF52151 742 843 2.62E-60 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2139 2320 2.5E-51 T 22-04-2016 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Pfam PF13489 Methyltransferase domain 1389 1511 1.9E-6 T 22-04-2016 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF55048 676 740 6.41E-10 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Gene3D G3DSA:3.40.50.720 2140 2304 7.4E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF47336 2419 2507 1.44E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SUPERFAMILY SSF51735 2139 2326 1.15E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Gene3D G3DSA:3.40.47.10 266 431 2.0E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Gene3D G3DSA:3.40.366.10 536 670 3.1E-64 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Gene3D G3DSA:3.40.366.10 740 853 3.1E-64 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Pfam PF00107 Zinc-binding dehydrogenase 1943 2033 4.6E-23 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SMART SM00826 912 1074 2.8E-37 T 22-04-2016 IPR020807 Polyketide synthase, dehydratase domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SMART SM00823 Phosphopantetheine attachment site 2420 2491 7.4E-7 T 22-04-2016 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Pfam PF14765 Polyketide synthase dehydratase 912 1192 7.7E-55 T 22-04-2016 IPR020807 Polyketide synthase, dehydratase domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SMART SM00825 Beta-ketoacyl synthase 6 432 7.1E-215 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Gene3D G3DSA:3.40.50.150 1390 1551 2.3E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SMART SM00829 1799 2114 6.7E-174 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 379 1.2E-35 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 543 850 1.4E-90 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 PANTHER PTHR11712 6 2487 0.0 T 22-04-2016 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 PANTHER PTHR11712 2523 2536 0.0 T 22-04-2016 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Gene3D G3DSA:3.30.70.250 675 730 1.9E-4 T 22-04-2016 JE55_RS04990 d665507bd80cec8be710311fa28dd935 2546 Pfam PF00698 Acyl transferase domain 543 861 1.1E-60 T 22-04-2016 IPR014043 Acyl transferase JE55_RS29920 b1040b5e55a699874b0cd91053433cc4 169 PANTHER PTHR24220 1 28 1.1E-70 T 22-04-2016 JE55_RS29920 b1040b5e55a699874b0cd91053433cc4 169 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 146 168 9.3E-12 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JE55_RS29920 b1040b5e55a699874b0cd91053433cc4 169 PANTHER PTHR24220 44 169 1.1E-70 T 22-04-2016 JE55_RS29920 b1040b5e55a699874b0cd91053433cc4 169 SUPERFAMILY SSF52540 2 167 5.23E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS29920 b1040b5e55a699874b0cd91053433cc4 169 PANTHER PTHR24220:SF358 44 169 1.1E-70 T 22-04-2016 JE55_RS29920 b1040b5e55a699874b0cd91053433cc4 169 PANTHER PTHR24220:SF358 1 28 1.1E-70 T 22-04-2016 JE55_RS29920 b1040b5e55a699874b0cd91053433cc4 169 Gene3D G3DSA:3.40.50.300 2 166 3.0E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS29920 b1040b5e55a699874b0cd91053433cc4 169 Pfam PF00005 ABC transporter 2 97 4.1E-11 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS12700 3ff2ff9a69c0d6e27614cc721b87037d 342 Gene3D G3DSA:3.40.50.300 60 159 8.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12700 3ff2ff9a69c0d6e27614cc721b87037d 342 PANTHER PTHR30160 9 337 3.2E-69 T 22-04-2016 JE55_RS12700 3ff2ff9a69c0d6e27614cc721b87037d 342 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 14 341 38.201 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 JE55_RS12700 3ff2ff9a69c0d6e27614cc721b87037d 342 SUPERFAMILY SSF52540 59 173 4.96E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12700 3ff2ff9a69c0d6e27614cc721b87037d 342 PANTHER PTHR30160:SF13 9 337 3.2E-69 T 22-04-2016 JE55_RS12700 3ff2ff9a69c0d6e27614cc721b87037d 342 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 25 335 1.5E-99 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 JE55_RS12700 3ff2ff9a69c0d6e27614cc721b87037d 342 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 33 324 3.3E-66 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 JE55_RS10545 7948b16e7b4872cba3ee9f1fe9637c4b 135 PANTHER PTHR11695 10 135 4.5E-16 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 JE55_RS10545 7948b16e7b4872cba3ee9f1fe9637c4b 135 SUPERFAMILY SSF51735 16 110 2.79E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10545 7948b16e7b4872cba3ee9f1fe9637c4b 135 PANTHER PTHR11695:SF28 10 135 4.5E-16 T 22-04-2016 JE55_RS10545 7948b16e7b4872cba3ee9f1fe9637c4b 135 Pfam PF13602 Zinc-binding dehydrogenase 15 133 1.1E-13 T 22-04-2016 JE55_RS10545 7948b16e7b4872cba3ee9f1fe9637c4b 135 Gene3D G3DSA:3.40.50.720 5 101 2.2E-12 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07295 caeea1664b3c631c0df357edb6720a7a 60 SUPERFAMILY SSF55129 4 58 1.22E-19 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain JE55_RS07295 caeea1664b3c631c0df357edb6720a7a 60 PANTHER PTHR15892 4 58 1.4E-23 T 22-04-2016 JE55_RS07295 caeea1664b3c631c0df357edb6720a7a 60 Pfam PF00327 Ribosomal protein L30p/L7e 7 56 1.6E-17 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain JE55_RS07295 caeea1664b3c631c0df357edb6720a7a 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 3 60 20.137 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 JE55_RS07295 caeea1664b3c631c0df357edb6720a7a 60 PIRSF PIRSF002211 1 60 6.8E-26 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 JE55_RS07295 caeea1664b3c631c0df357edb6720a7a 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 59 7.9E-24 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 JE55_RS07295 caeea1664b3c631c0df357edb6720a7a 60 Gene3D G3DSA:3.30.1390.20 4 59 6.3E-30 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 SUPERFAMILY SSF81296 15 116 5.6E-13 T 22-04-2016 IPR014756 Immunoglobulin E-set JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 122 736 1.0E-249 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 SUPERFAMILY SSF51445 174 628 7.2E-101 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 Gene3D G3DSA:3.20.20.80 253 621 7.3E-84 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 Gene3D G3DSA:2.60.40.10 14 109 3.9E-12 T 22-04-2016 IPR013783 Immunoglobulin-like fold JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 Gene3D G3DSA:2.60.40.10 120 225 6.1E-31 T 22-04-2016 IPR013783 Immunoglobulin-like fold JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 PANTHER PTHR10357:SF160 49 737 0.0 T 22-04-2016 JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 PANTHER PTHR10357 49 737 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 SMART SM00642 258 622 8.9E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 640 737 1.5E-22 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 SUPERFAMILY SSF51011 635 737 2.73E-34 T 22-04-2016 JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 104 738 42.242 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 Gene3D G3DSA:2.60.40.1180 635 737 4.3E-37 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 128 211 5.6E-20 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 JE55_RS15460 0b323532c244191ea36bbdbd255e949f 738 PIRSF PIRSF000463 7 738 6.5E-259 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 JE55_RS12280 1889eed638b5aee7b5e59959af030480 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 328 3.8E-94 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JE55_RS12280 1889eed638b5aee7b5e59959af030480 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JE55_RS12280 1889eed638b5aee7b5e59959af030480 354 Gene3D G3DSA:3.20.20.70 1 335 3.2E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS12280 1889eed638b5aee7b5e59959af030480 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 1.7E-181 T 22-04-2016 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 JE55_RS12280 1889eed638b5aee7b5e59959af030480 354 SUPERFAMILY SSF51569 3 329 3.22E-105 T 22-04-2016 JE55_RS12280 1889eed638b5aee7b5e59959af030480 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JE55_RS12280 1889eed638b5aee7b5e59959af030480 354 PANTHER PTHR30304 1 349 2.0E-121 T 22-04-2016 JE55_RS12280 1889eed638b5aee7b5e59959af030480 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 6.1E-99 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JE55_RS12280 1889eed638b5aee7b5e59959af030480 354 PIRSF PIRSF001359 1 329 4.0E-84 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 JE55_RS30230 3bec77ff0b532e802324aa81cbec00c0 231 PANTHER PTHR11751 116 223 2.0E-23 T 22-04-2016 JE55_RS30230 3bec77ff0b532e802324aa81cbec00c0 231 PANTHER PTHR11751 84 96 2.0E-23 T 22-04-2016 JE55_RS30230 3bec77ff0b532e802324aa81cbec00c0 231 PANTHER PTHR11751 1 56 2.0E-23 T 22-04-2016 JE55_RS30230 3bec77ff0b532e802324aa81cbec00c0 231 PANTHER PTHR11751:SF406 116 223 2.0E-23 T 22-04-2016 JE55_RS30230 3bec77ff0b532e802324aa81cbec00c0 231 PANTHER PTHR11751:SF406 84 96 2.0E-23 T 22-04-2016 JE55_RS30230 3bec77ff0b532e802324aa81cbec00c0 231 PANTHER PTHR11751:SF406 1 56 2.0E-23 T 22-04-2016 JE55_RS30230 3bec77ff0b532e802324aa81cbec00c0 231 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 176 230 4.7E-14 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 JE55_RS30230 3bec77ff0b532e802324aa81cbec00c0 231 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 1 149 1.9E-37 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 JE55_RS30230 3bec77ff0b532e802324aa81cbec00c0 231 SUPERFAMILY SSF53383 1 169 5.54E-30 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS30230 3bec77ff0b532e802324aa81cbec00c0 231 SUPERFAMILY SSF55904 170 231 1.31E-11 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 JE55_RS30230 3bec77ff0b532e802324aa81cbec00c0 231 Gene3D G3DSA:3.90.1150.10 25 199 5.1E-71 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS03865 b64f1746338ab8f109d6bdd5f50c37fa 67 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 60 16.775 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS03865 b64f1746338ab8f109d6bdd5f50c37fa 67 PANTHER PTHR34476 2 62 1.9E-16 T 22-04-2016 JE55_RS03865 b64f1746338ab8f109d6bdd5f50c37fa 67 Gene3D G3DSA:3.90.940.10 1 63 8.7E-12 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS03865 b64f1746338ab8f109d6bdd5f50c37fa 67 SUPERFAMILY SSF63562 1 63 1.44E-20 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS03865 b64f1746338ab8f109d6bdd5f50c37fa 67 Pfam PF01192 RNA polymerase Rpb6 8 57 2.0E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS03865 b64f1746338ab8f109d6bdd5f50c37fa 67 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 57 3.1E-19 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS03865 b64f1746338ab8f109d6bdd5f50c37fa 67 SMART SM01409 8 59 6.2E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 755 941 3.2E-24 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 481 570 2.2E-6 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 PANTHER PTHR18968 375 584 2.6E-193 T 22-04-2016 JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 PANTHER PTHR18968 604 783 2.6E-193 T 22-04-2016 JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 SUPERFAMILY SSF52518 33 217 2.77E-18 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 SUPERFAMILY SSF53323 747 994 2.35E-31 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 Gene3D G3DSA:3.40.920.10 749 944 9.6E-16 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 PANTHER PTHR18968:SF134 375 584 2.6E-193 T 22-04-2016 JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 PANTHER PTHR18968:SF134 604 783 2.6E-193 T 22-04-2016 JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 SUPERFAMILY SSF52518 461 648 2.25E-17 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 Gene3D G3DSA:3.40.50.970 514 673 3.5E-10 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS07575 02098742d1e16fd8d9f8e46548a298cc 1193 Gene3D G3DSA:3.40.50.970 114 230 8.3E-4 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS05310 8a25277b591acc2da7eff08ee6fb4730 256 SMART SM00382 29 227 1.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS05310 8a25277b591acc2da7eff08ee6fb4730 256 PANTHER PTHR24220 6 255 3.2E-120 T 22-04-2016 JE55_RS05310 8a25277b591acc2da7eff08ee6fb4730 256 SUPERFAMILY SSF52540 3 252 1.87E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05310 8a25277b591acc2da7eff08ee6fb4730 256 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS05310 8a25277b591acc2da7eff08ee6fb4730 256 PANTHER PTHR24220:SF554 6 255 3.2E-120 T 22-04-2016 JE55_RS05310 8a25277b591acc2da7eff08ee6fb4730 256 PIRSF PIRSF037116 1 256 9.4E-139 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK JE55_RS05310 8a25277b591acc2da7eff08ee6fb4730 256 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 3 254 1.0E-106 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK JE55_RS05310 8a25277b591acc2da7eff08ee6fb4730 256 Pfam PF00005 ABC transporter 21 178 2.8E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS05310 8a25277b591acc2da7eff08ee6fb4730 256 Gene3D G3DSA:3.40.50.300 2 252 6.8E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11945 e7078955946510f959d63fc853c9ff4d 359 Gene3D G3DSA:3.40.250.10 17 127 2.8E-32 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS11945 e7078955946510f959d63fc853c9ff4d 359 Gene3D G3DSA:3.40.50.300 129 165 3.9E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11945 e7078955946510f959d63fc853c9ff4d 359 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 14 316 2.3E-110 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 JE55_RS11945 e7078955946510f959d63fc853c9ff4d 359 Pfam PF00581 Rhodanese-like domain 9 125 2.8E-8 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS11945 e7078955946510f959d63fc853c9ff4d 359 SMART SM00450 1 130 8.4E-10 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS11945 e7078955946510f959d63fc853c9ff4d 359 PANTHER PTHR30401:SF0 17 258 3.1E-66 T 22-04-2016 JE55_RS11945 e7078955946510f959d63fc853c9ff4d 359 PANTHER PTHR30401 17 258 3.1E-66 T 22-04-2016 JE55_RS11945 e7078955946510f959d63fc853c9ff4d 359 SUPERFAMILY SSF52821 17 63 8.77E-22 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS11945 e7078955946510f959d63fc853c9ff4d 359 SUPERFAMILY SSF52821 90 128 8.77E-22 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS08230 d4d1d173c396f0b1c06d3395be2fad24 975 PANTHER PTHR11773 7 975 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 JE55_RS08230 d4d1d173c396f0b1c06d3395be2fad24 975 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 29 968 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 JE55_RS08230 d4d1d173c396f0b1c06d3395be2fad24 975 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 20 974 25.888 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 JE55_RS08230 d4d1d173c396f0b1c06d3395be2fad24 975 Gene3D G3DSA:3.40.640.10 99 328 4.9E-17 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS08230 d4d1d173c396f0b1c06d3395be2fad24 975 Gene3D G3DSA:3.40.640.10 519 755 3.6E-41 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS08230 d4d1d173c396f0b1c06d3395be2fad24 975 PANTHER PTHR11773:SF1 7 975 0.0 T 22-04-2016 JE55_RS08230 d4d1d173c396f0b1c06d3395be2fad24 975 SUPERFAMILY SSF53383 29 457 1.53E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS08230 d4d1d173c396f0b1c06d3395be2fad24 975 Pfam PF02347 Glycine cleavage system P-protein 28 454 8.4E-179 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 JE55_RS08230 d4d1d173c396f0b1c06d3395be2fad24 975 Pfam PF02347 Glycine cleavage system P-protein 492 760 3.7E-11 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 JE55_RS08230 d4d1d173c396f0b1c06d3395be2fad24 975 SUPERFAMILY SSF53383 947 969 2.64E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS08230 d4d1d173c396f0b1c06d3395be2fad24 975 SUPERFAMILY SSF53383 496 904 2.64E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS15135 c1aa6bf2402ecf256f3335cb5c659660 209 Gene3D G3DSA:1.20.1050.10 84 204 6.7E-13 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS15135 c1aa6bf2402ecf256f3335cb5c659660 209 PANTHER PTHR11260:SF325 1 207 4.4E-70 T 22-04-2016 JE55_RS15135 c1aa6bf2402ecf256f3335cb5c659660 209 SUPERFAMILY SSF47616 77 206 6.4E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS15135 c1aa6bf2402ecf256f3335cb5c659660 209 PANTHER PTHR11260 1 207 4.4E-70 T 22-04-2016 JE55_RS15135 c1aa6bf2402ecf256f3335cb5c659660 209 Gene3D G3DSA:3.40.30.10 1 83 5.2E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS15135 c1aa6bf2402ecf256f3335cb5c659660 209 Pfam PF13410 Glutathione S-transferase, C-terminal domain 122 193 4.6E-8 T 22-04-2016 JE55_RS15135 c1aa6bf2402ecf256f3335cb5c659660 209 SUPERFAMILY SSF52833 1 88 4.49E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS15135 c1aa6bf2402ecf256f3335cb5c659660 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 73 3.5E-19 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JE55_RS12415 8e67ff072bf95fccee9da7f8fc10b201 320 Pfam PF01297 Zinc-uptake complex component A periplasmic 58 312 1.5E-50 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 JE55_RS12415 8e67ff072bf95fccee9da7f8fc10b201 320 SUPERFAMILY SSF53807 51 318 4.27E-64 T 22-04-2016 JE55_RS12415 8e67ff072bf95fccee9da7f8fc10b201 320 PANTHER PTHR30477:SF1 19 268 4.7E-41 T 22-04-2016 JE55_RS12415 8e67ff072bf95fccee9da7f8fc10b201 320 PANTHER PTHR30477 19 268 4.7E-41 T 22-04-2016 JE55_RS12415 8e67ff072bf95fccee9da7f8fc10b201 320 PRINTS PR00690 Adhesin family signature 55 73 9.1E-7 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 JE55_RS12415 8e67ff072bf95fccee9da7f8fc10b201 320 PRINTS PR00690 Adhesin family signature 100 117 9.1E-7 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 JE55_RS12415 8e67ff072bf95fccee9da7f8fc10b201 320 PRINTS PR00690 Adhesin family signature 87 100 9.1E-7 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 JE55_RS12415 8e67ff072bf95fccee9da7f8fc10b201 320 Gene3D G3DSA:3.40.50.1980 209 316 3.2E-11 T 22-04-2016 JE55_RS12415 8e67ff072bf95fccee9da7f8fc10b201 320 Gene3D G3DSA:3.40.50.1980 48 199 1.2E-39 T 22-04-2016 JE55_RS11055 3f2a226228a6f22e64d0fc40539f29d2 131 Gene3D G3DSA:2.102.10.10 6 107 7.7E-26 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS11055 3f2a226228a6f22e64d0fc40539f29d2 131 PANTHER PTHR21496 7 74 7.2E-15 T 22-04-2016 JE55_RS11055 3f2a226228a6f22e64d0fc40539f29d2 131 Pfam PF00355 Rieske [2Fe-2S] domain 7 80 2.7E-13 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS11055 3f2a226228a6f22e64d0fc40539f29d2 131 SUPERFAMILY SSF50022 7 110 3.27E-30 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS14050 82137d2f4f0f9f4e61759307f1f0b96b 82 Pfam PF01844 HNH endonuclease 14 59 2.5E-8 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 JE55_RS14050 82137d2f4f0f9f4e61759307f1f0b96b 82 SMART SM00507 2 55 2.1E-11 T 22-04-2016 IPR003615 HNH nuclease JE55_RS01995 c3afe13f0021ff02fc4708de9dfa28f2 181 PANTHER PTHR10516:SF316 1 82 7.8E-15 T 22-04-2016 JE55_RS01995 c3afe13f0021ff02fc4708de9dfa28f2 181 PANTHER PTHR10516:SF316 131 176 7.8E-15 T 22-04-2016 JE55_RS01995 c3afe13f0021ff02fc4708de9dfa28f2 181 PANTHER PTHR10516 1 82 7.8E-15 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type JE55_RS01995 c3afe13f0021ff02fc4708de9dfa28f2 181 PANTHER PTHR10516 131 176 7.8E-15 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type JE55_RS01995 c3afe13f0021ff02fc4708de9dfa28f2 181 SUPERFAMILY SSF54534 2 142 1.96E-28 T 22-04-2016 JE55_RS01995 c3afe13f0021ff02fc4708de9dfa28f2 181 Gene3D G3DSA:3.10.50.40 3 68 1.5E-8 T 22-04-2016 JE55_RS01995 c3afe13f0021ff02fc4708de9dfa28f2 181 Gene3D G3DSA:3.10.50.40 124 141 1.5E-8 T 22-04-2016 JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 Pfam PF00072 Response regulator receiver domain 5 119 1.0E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 Gene3D G3DSA:3.40.50.2300 2 123 1.2E-25 T 22-04-2016 JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 SUPERFAMILY SSF46894 145 210 9.52E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 PANTHER PTHR26402:SF458 3 210 2.1E-50 T 22-04-2016 JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 SMART SM00448 3 119 2.0E-18 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 6.5E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 Gene3D G3DSA:1.10.10.10 124 210 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 SUPERFAMILY SSF52172 2 129 1.99E-25 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 SMART SM00421 147 204 3.1E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS15765 523eab1957cabe03a9557d51e82e213c 210 PANTHER PTHR26402 3 210 2.1E-50 T 22-04-2016 JE55_RS04665 b7ff11ef25be8f3eecea11e8ce22814a 296 PANTHER PTHR32322 1 294 1.2E-78 T 22-04-2016 JE55_RS04665 b7ff11ef25be8f3eecea11e8ce22814a 296 SUPERFAMILY SSF103481 35 137 1.31E-15 T 22-04-2016 JE55_RS04665 b7ff11ef25be8f3eecea11e8ce22814a 296 SUPERFAMILY SSF103481 184 284 1.7E-9 T 22-04-2016 JE55_RS04665 b7ff11ef25be8f3eecea11e8ce22814a 296 PANTHER PTHR32322:SF8 1 294 1.2E-78 T 22-04-2016 JE55_RS04665 b7ff11ef25be8f3eecea11e8ce22814a 296 Pfam PF00892 EamA-like transporter family 149 283 2.7E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS04665 b7ff11ef25be8f3eecea11e8ce22814a 296 Pfam PF00892 EamA-like transporter family 7 134 2.6E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS01735 8f50b289a3ef0604c8d3530769f8dc84 153 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 83 128 6.2E-12 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 JE55_RS01735 8f50b289a3ef0604c8d3530769f8dc84 153 Pfam PF12728 Helix-turn-helix domain 83 129 4.8E-8 T 22-04-2016 JE55_RS04545 f8350ac1cabde79393009c54a6ce7201 195 PANTHER PTHR10245 3 183 9.4E-43 T 22-04-2016 JE55_RS04545 f8350ac1cabde79393009c54a6ce7201 195 Gene3D G3DSA:2.60.120.10 81 182 4.2E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS04545 f8350ac1cabde79393009c54a6ce7201 195 Gene3D G3DSA:1.10.260.40 2 71 5.5E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS04545 f8350ac1cabde79393009c54a6ce7201 195 SMART SM00530 10 65 6.8E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JE55_RS04545 f8350ac1cabde79393009c54a6ce7201 195 SUPERFAMILY SSF47413 2 69 8.45E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS04545 f8350ac1cabde79393009c54a6ce7201 195 PANTHER PTHR10245:SF21 3 183 9.4E-43 T 22-04-2016 JE55_RS04545 f8350ac1cabde79393009c54a6ce7201 195 Pfam PF01381 Helix-turn-helix 11 63 2.2E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JE55_RS04545 f8350ac1cabde79393009c54a6ce7201 195 SUPERFAMILY SSF51182 50 186 6.51E-20 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS04165 15a71406f0cd8a1815fd0bb60f9772b8 378 Gene3D G3DSA:3.40.50.720 124 239 1.4E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04165 15a71406f0cd8a1815fd0bb60f9772b8 378 Gene3D G3DSA:3.40.50.720 7 53 1.4E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04165 15a71406f0cd8a1815fd0bb60f9772b8 378 Pfam PF10728 Domain of unknown function (DUF2520) 210 337 1.1E-26 T 22-04-2016 IPR018931 Domain of unknown function DUF2520 JE55_RS04165 15a71406f0cd8a1815fd0bb60f9772b8 378 SUPERFAMILY SSF51735 123 239 2.29E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04165 15a71406f0cd8a1815fd0bb60f9772b8 378 SUPERFAMILY SSF51735 8 55 6.79E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04165 15a71406f0cd8a1815fd0bb60f9772b8 378 PANTHER PTHR40459:SF1 124 373 4.2E-33 T 22-04-2016 JE55_RS04165 15a71406f0cd8a1815fd0bb60f9772b8 378 PANTHER PTHR40459 124 373 4.2E-33 T 22-04-2016 JE55_RS04165 15a71406f0cd8a1815fd0bb60f9772b8 378 Pfam PF10727 Rossmann-like domain 99 193 5.2E-7 T 22-04-2016 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain JE55_RS04165 15a71406f0cd8a1815fd0bb60f9772b8 378 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 8 52 3.8E-7 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal JE55_RS04165 15a71406f0cd8a1815fd0bb60f9772b8 378 SUPERFAMILY SSF48179 243 345 5.44E-19 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS04165 15a71406f0cd8a1815fd0bb60f9772b8 378 Gene3D G3DSA:1.10.1040.20 243 343 3.1E-25 T 22-04-2016 IPR018931 Domain of unknown function DUF2520 JE55_RS06985 51413ce4f124c38faf472cb59c7c8279 213 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 4 211 34.62 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 JE55_RS06985 51413ce4f124c38faf472cb59c7c8279 213 Pfam PF00117 Glutamine amidotransferase class-I 7 203 1.5E-16 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 JE55_RS06985 51413ce4f124c38faf472cb59c7c8279 213 PANTHER PTHR21235 5 211 4.1E-78 T 22-04-2016 JE55_RS06985 51413ce4f124c38faf472cb59c7c8279 213 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 210 3.5E-60 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 JE55_RS06985 51413ce4f124c38faf472cb59c7c8279 213 SUPERFAMILY SSF52317 5 211 6.02E-54 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS06985 51413ce4f124c38faf472cb59c7c8279 213 Gene3D G3DSA:3.40.50.880 2 211 1.7E-78 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS06985 51413ce4f124c38faf472cb59c7c8279 213 PIRSF PIRSF000495 3 213 2.9E-66 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 JE55_RS06985 51413ce4f124c38faf472cb59c7c8279 213 PANTHER PTHR21235:SF1 5 211 4.1E-78 T 22-04-2016 JE55_RS32205 44ef4cd326c2beda7011cc2f79e44b82 95 Pfam PF07042 TrfA protein 9 88 2.5E-6 T 22-04-2016 IPR010751 Plasmid replication initiator protein TrfA JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 Hamap MF_01151 Protein GrpE [grpE]. 2 183 20.365 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 SUPERFAMILY SSF51064 130 184 2.62E-18 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 ProSitePatterns PS01071 grpE protein signature. 139 181 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 PANTHER PTHR21237 19 185 1.1E-56 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 Gene3D G3DSA:2.30.22.10 129 184 4.4E-26 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 PRINTS PR00773 GrpE protein signature 136 151 6.0E-28 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 PRINTS PR00773 GrpE protein signature 84 99 6.0E-28 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 PRINTS PR00773 GrpE protein signature 162 181 6.0E-28 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 PRINTS PR00773 GrpE protein signature 56 72 6.0E-28 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 Pfam PF01025 GrpE 27 183 2.1E-50 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 Gene3D G3DSA:3.90.20.20 31 126 1.9E-29 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil JE55_RS05185 bbd7bf860f9dbd3dd4b5f1eab5c95fed 185 SUPERFAMILY SSF58014 37 126 1.7E-24 T 22-04-2016 JE55_RS18180 bf871f933f378d54268e2e5854c3df24 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 301 1.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS18180 bf871f933f378d54268e2e5854c3df24 309 PANTHER PTHR30193:SF5 20 309 1.6E-123 T 22-04-2016 JE55_RS18180 bf871f933f378d54268e2e5854c3df24 309 SUPERFAMILY SSF161098 22 299 1.57E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS18180 bf871f933f378d54268e2e5854c3df24 309 Gene3D G3DSA:1.10.3720.10 20 297 2.9E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS18180 bf871f933f378d54268e2e5854c3df24 309 PANTHER PTHR30193 20 309 1.6E-123 T 22-04-2016 JE55_RS01525 02df4e3b07600153dd5e96c979c42f02 354 Gene3D G3DSA:3.40.50.1100 137 302 3.4E-32 T 22-04-2016 JE55_RS01525 02df4e3b07600153dd5e96c979c42f02 354 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 40 287 2.2E-30 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS01525 02df4e3b07600153dd5e96c979c42f02 354 Gene3D G3DSA:3.40.50.1100 39 136 2.4E-16 T 22-04-2016 JE55_RS01525 02df4e3b07600153dd5e96c979c42f02 354 SUPERFAMILY SSF53686 39 307 1.15E-46 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS01525 02df4e3b07600153dd5e96c979c42f02 354 PANTHER PTHR10314 43 323 9.3E-39 T 22-04-2016 JE55_RS01525 02df4e3b07600153dd5e96c979c42f02 354 PANTHER PTHR10314:SF8 43 323 9.3E-39 T 22-04-2016 JE55_RS07085 403575181bba545344f1b8f87d3d4815 588 Gene3D G3DSA:3.40.50.300 406 579 1.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07085 403575181bba545344f1b8f87d3d4815 588 SMART SM00382 411 587 3.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS07085 403575181bba545344f1b8f87d3d4815 588 SUPERFAMILY SSF52540 406 578 1.14E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07085 403575181bba545344f1b8f87d3d4815 588 Pfam PF06472 ABC transporter transmembrane region 2 24 308 2.2E-67 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS07085 403575181bba545344f1b8f87d3d4815 588 PANTHER PTHR11384 25 583 4.2E-192 T 22-04-2016 JE55_RS07085 403575181bba545344f1b8f87d3d4815 588 Gene3D G3DSA:1.20.1560.10 25 354 7.2E-12 T 22-04-2016 JE55_RS07085 403575181bba545344f1b8f87d3d4815 588 Pfam PF00005 ABC transporter 407 537 7.5E-14 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS07085 403575181bba545344f1b8f87d3d4815 588 SUPERFAMILY SSF90123 25 354 4.19E-26 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS07085 403575181bba545344f1b8f87d3d4815 588 PANTHER PTHR11384:SF3 25 583 4.2E-192 T 22-04-2016 JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 PANTHER PTHR23501:SF66 5 451 1.6E-117 T 22-04-2016 JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 Gene3D G3DSA:1.20.1250.20 12 191 1.6E-26 T 22-04-2016 JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 Gene3D G3DSA:1.20.1250.20 260 451 5.1E-10 T 22-04-2016 JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 SUPERFAMILY SSF103473 243 450 1.57E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 SUPERFAMILY SSF103473 8 195 1.57E-51 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 2.5E-6 T 22-04-2016 JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 395 414 2.5E-6 T 22-04-2016 JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 2.5E-6 T 22-04-2016 JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 198 216 2.5E-6 T 22-04-2016 JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 2.5E-6 T 22-04-2016 JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 Pfam PF07690 Major Facilitator Superfamily 14 404 2.6E-41 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS17320 e60c99aaf3d6bec0cd4d75d87f313c3b 467 PANTHER PTHR23501 5 451 1.6E-117 T 22-04-2016 JE55_RS12645 f2007aa59030551b416b61af20523239 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.2E-65 T 22-04-2016 IPR007551 Protein of unknown function DUF520 JE55_RS12645 f2007aa59030551b416b61af20523239 161 Gene3D G3DSA:3.30.70.860 95 161 1.0E-31 T 22-04-2016 JE55_RS12645 f2007aa59030551b416b61af20523239 161 SUPERFAMILY SSF89963 89 161 9.81E-27 T 22-04-2016 IPR007551 Protein of unknown function DUF520 JE55_RS12645 f2007aa59030551b416b61af20523239 161 PANTHER PTHR30476:SF0 1 161 2.0E-74 T 22-04-2016 JE55_RS12645 f2007aa59030551b416b61af20523239 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 28.242 T 22-04-2016 IPR007551 Protein of unknown function DUF520 JE55_RS12645 f2007aa59030551b416b61af20523239 161 Gene3D G3DSA:3.30.70.990 9 94 4.0E-33 T 22-04-2016 JE55_RS12645 f2007aa59030551b416b61af20523239 161 SUPERFAMILY SSF89963 2 87 3.4E-32 T 22-04-2016 IPR007551 Protein of unknown function DUF520 JE55_RS12645 f2007aa59030551b416b61af20523239 161 PANTHER PTHR30476 1 161 2.0E-74 T 22-04-2016 JE55_RS09785 82527d701dc3daed43ea2b59385e5a54 262 PANTHER PTHR30435 1 262 2.3E-130 T 22-04-2016 JE55_RS09785 82527d701dc3daed43ea2b59385e5a54 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 2.2E-122 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 JE55_RS09785 82527d701dc3daed43ea2b59385e5a54 262 Pfam PF00460 Flagella basal body rod protein 5 35 2.5E-13 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JE55_RS09785 82527d701dc3daed43ea2b59385e5a54 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site JE55_RS09785 82527d701dc3daed43ea2b59385e5a54 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 260 3.8E-26 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JE55_RS09785 82527d701dc3daed43ea2b59385e5a54 262 Gene3D G3DSA:2.60.120.170 101 172 6.9E-4 T 22-04-2016 JE55_RS09785 82527d701dc3daed43ea2b59385e5a54 262 SUPERFAMILY SSF117143 93 222 4.18E-35 T 22-04-2016 JE55_RS09785 82527d701dc3daed43ea2b59385e5a54 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 136 2.2E-49 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G JE55_RS09785 82527d701dc3daed43ea2b59385e5a54 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 5.9E-32 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G JE55_RS09785 82527d701dc3daed43ea2b59385e5a54 262 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 241 9.3E-54 T 22-04-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 JE55_RS09785 82527d701dc3daed43ea2b59385e5a54 262 PANTHER PTHR30435:SF19 1 262 2.3E-130 T 22-04-2016 JE55_RS15980 225f13f489c3c50827deed40e24cf48b 293 SUPERFAMILY SSF53448 4 277 5.2E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS15980 225f13f489c3c50827deed40e24cf48b 293 PANTHER PTHR22572 6 285 5.4E-102 T 22-04-2016 JE55_RS15980 225f13f489c3c50827deed40e24cf48b 293 Pfam PF00483 Nucleotidyl transferase 11 265 1.4E-27 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 JE55_RS15980 225f13f489c3c50827deed40e24cf48b 293 PANTHER PTHR22572:SF14 6 285 5.4E-102 T 22-04-2016 JE55_RS15980 225f13f489c3c50827deed40e24cf48b 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 265 7.1E-117 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 JE55_RS15980 225f13f489c3c50827deed40e24cf48b 293 Gene3D G3DSA:3.90.550.10 4 276 2.3E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS00585 97e2729da0d8ec9d49b682532258a68d 332 SUPERFAMILY SSF51735 123 294 4.93E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00585 97e2729da0d8ec9d49b682532258a68d 332 Pfam PF16884 N-terminal domain of oxidoreductase 6 113 6.2E-37 T 22-04-2016 JE55_RS00585 97e2729da0d8ec9d49b682532258a68d 332 Pfam PF00107 Zinc-binding dehydrogenase 158 290 4.9E-20 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JE55_RS00585 97e2729da0d8ec9d49b682532258a68d 332 Gene3D G3DSA:3.40.50.720 141 298 4.5E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00585 97e2729da0d8ec9d49b682532258a68d 332 PANTHER PTHR11695:SF528 23 329 1.7E-113 T 22-04-2016 JE55_RS00585 97e2729da0d8ec9d49b682532258a68d 332 PANTHER PTHR11695 23 329 1.7E-113 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 JE55_RS00585 97e2729da0d8ec9d49b682532258a68d 332 Gene3D G3DSA:3.90.180.10 2 140 3.5E-54 T 22-04-2016 IPR011032 GroES-like JE55_RS00585 97e2729da0d8ec9d49b682532258a68d 332 SUPERFAMILY SSF50129 4 139 1.45E-38 T 22-04-2016 IPR011032 GroES-like JE55_RS00585 97e2729da0d8ec9d49b682532258a68d 332 SMART SM00829 18 329 1.1E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JE55_RS16285 c85ba27afe102efad9de1cef2df39634 133 PANTHER PTHR30007:SF0 5 86 3.6E-14 T 22-04-2016 JE55_RS16285 c85ba27afe102efad9de1cef2df39634 133 PANTHER PTHR30007 5 86 3.6E-14 T 22-04-2016 JE55_RS16285 c85ba27afe102efad9de1cef2df39634 133 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 82 4.9E-21 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family JE55_RS03155 cfb25361872ffd741f354fe4e61622c3 199 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 191 3.0E-98 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS03155 cfb25361872ffd741f354fe4e61622c3 199 Gene3D G3DSA:1.10.10.10 125 189 5.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03155 cfb25361872ffd741f354fe4e61622c3 199 Pfam PF04542 Sigma-70 region 2 25 92 4.7E-20 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS03155 cfb25361872ffd741f354fe4e61622c3 199 Pfam PF08281 Sigma-70, region 4 133 182 8.9E-19 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS03155 cfb25361872ffd741f354fe4e61622c3 199 SUPERFAMILY SSF88659 124 187 2.24E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS03155 cfb25361872ffd741f354fe4e61622c3 199 PANTHER PTHR30173 7 198 7.3E-52 T 22-04-2016 JE55_RS03155 cfb25361872ffd741f354fe4e61622c3 199 SUPERFAMILY SSF88946 4 109 2.04E-32 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS03155 cfb25361872ffd741f354fe4e61622c3 199 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 186 6.1E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS03155 cfb25361872ffd741f354fe4e61622c3 199 Gene3D G3DSA:1.10.1740.10 4 113 8.6E-39 T 22-04-2016 JE55_RS03155 cfb25361872ffd741f354fe4e61622c3 199 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS01615 3df54de3e8d45d27d240e60757ebecef 477 SUPERFAMILY SSF52540 292 460 9.49E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01615 3df54de3e8d45d27d240e60757ebecef 477 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 292 464 32.34 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 JE55_RS01615 3df54de3e8d45d27d240e60757ebecef 477 Gene3D G3DSA:3.40.50.300 294 459 1.2E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01615 3df54de3e8d45d27d240e60757ebecef 477 Gene3D G3DSA:3.40.50.150 8 86 1.2E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS01615 3df54de3e8d45d27d240e60757ebecef 477 Pfam PF01583 Adenylylsulphate kinase 294 448 1.6E-57 T 22-04-2016 JE55_RS01615 3df54de3e8d45d27d240e60757ebecef 477 PANTHER PTHR11055 296 456 2.7E-68 T 22-04-2016 JE55_RS01615 3df54de3e8d45d27d240e60757ebecef 477 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 295 456 2.7E-58 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 JE55_RS11675 80f294a694f65b71c797a7ce41e730ad 448 PANTHER PTHR10657 20 443 6.1E-78 T 22-04-2016 JE55_RS11675 80f294a694f65b71c797a7ce41e730ad 448 Pfam PF00639 PPIC-type PPIASE domain 192 287 1.1E-12 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 JE55_RS11675 80f294a694f65b71c797a7ce41e730ad 448 SUPERFAMILY SSF54534 188 288 1.11E-18 T 22-04-2016 JE55_RS11675 80f294a694f65b71c797a7ce41e730ad 448 SUPERFAMILY SSF54534 303 402 9.16E-32 T 22-04-2016 JE55_RS11675 80f294a694f65b71c797a7ce41e730ad 448 Pfam PF13616 PPIC-type PPIASE domain 300 399 1.6E-27 T 22-04-2016 JE55_RS11675 80f294a694f65b71c797a7ce41e730ad 448 PANTHER PTHR10657:SF16 20 443 6.1E-78 T 22-04-2016 JE55_RS11675 80f294a694f65b71c797a7ce41e730ad 448 SUPERFAMILY SSF109998 39 216 1.41E-40 T 22-04-2016 IPR027304 Trigger factor/SurA domain JE55_RS11675 80f294a694f65b71c797a7ce41e730ad 448 Gene3D G3DSA:3.10.50.40 184 295 1.5E-23 T 22-04-2016 JE55_RS11675 80f294a694f65b71c797a7ce41e730ad 448 Gene3D G3DSA:3.10.50.40 303 423 4.4E-38 T 22-04-2016 JE55_RS11675 80f294a694f65b71c797a7ce41e730ad 448 Pfam PF09312 SurA N-terminal domain 39 155 8.4E-32 T 22-04-2016 IPR015391 SurA N-terminal JE55_RS11675 80f294a694f65b71c797a7ce41e730ad 448 Hamap MF_01183 Chaperone SurA [surA]. 14 445 30.305 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 PANTHER PTHR10804:SF87 13 190 2.7E-150 T 22-04-2016 JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 PANTHER PTHR10804:SF87 291 602 2.7E-150 T 22-04-2016 JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 Gene3D G3DSA:3.40.350.10 182 303 1.2E-7 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 Gene3D G3DSA:3.40.350.10 13 139 8.0E-16 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 PANTHER PTHR10804 13 190 2.7E-150 T 22-04-2016 JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 PANTHER PTHR10804 291 602 2.7E-150 T 22-04-2016 JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 Pfam PF01321 Creatinase/Prolidase N-terminal domain 14 138 3.6E-17 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 Pfam PF16188 C-terminal region of peptidase_M24 545 604 3.9E-23 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 SUPERFAMILY SSF55920 310 561 1.96E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 Pfam PF00557 Metallopeptidase family M24 319 533 2.5E-43 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 Pfam PF16189 Creatinase/Prolidase N-terminal domain 158 316 9.4E-37 T 22-04-2016 JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 Gene3D G3DSA:3.90.230.10 311 570 2.2E-58 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS06580 eb7e8d55e6aecdc19c0a75d29505cffe 604 SUPERFAMILY SSF53092 12 144 4.19E-10 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal JE55_RS11700 7d62ceb74a4ac9492815ef9fae301106 292 Pfam PF01863 Protein of unknown function DUF45 75 284 6.4E-62 T 22-04-2016 IPR002725 Protein of unknown function DUF45 JE55_RS11700 7d62ceb74a4ac9492815ef9fae301106 292 PANTHER PTHR30399 56 284 8.7E-43 T 22-04-2016 JE55_RS07890 329ba0c21f13886751f271313751f377 583 Gene3D G3DSA:1.20.120.140 290 357 5.3E-4 T 22-04-2016 JE55_RS07890 329ba0c21f13886751f271313751f377 583 SMART SM00382 345 520 4.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS07890 329ba0c21f13886751f271313751f377 583 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 180 434 2.5E-67 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 JE55_RS07890 329ba0c21f13886751f271313751f377 583 Gene3D G3DSA:3.40.50.300 358 543 4.2E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07890 329ba0c21f13886751f271313751f377 583 Pfam PF00448 SRP54-type protein, GTPase domain 348 541 5.8E-32 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS07890 329ba0c21f13886751f271313751f377 583 PANTHER PTHR11564 249 541 1.1E-60 T 22-04-2016 JE55_RS07890 329ba0c21f13886751f271313751f377 583 PANTHER PTHR11564:SF3 249 541 1.1E-60 T 22-04-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 JE55_RS07890 329ba0c21f13886751f271313751f377 583 SMART SM00962 346 547 2.6E-47 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS07890 329ba0c21f13886751f271313751f377 583 SUPERFAMILY SSF52540 342 537 1.07E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 Gene3D G3DSA:2.40.50.140 128 185 1.3E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 PIRSF PIRSF005901 1 185 2.2E-55 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 PANTHER PTHR30053 1 185 1.4E-66 T 22-04-2016 JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 SUPERFAMILY SSF50104 1 63 1.99E-16 T 22-04-2016 IPR008991 Translation protein SH3-like domain JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 SUPERFAMILY SSF50249 65 126 2.02E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 6.8E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 Gene3D G3DSA:2.30.30.30 1 62 7.4E-21 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 TIGRFAM TIGR00038 efp: translation elongation factor P 3 185 2.9E-64 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 120 3.4E-17 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 Gene3D G3DSA:2.40.50.140 65 126 2.5E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 SUPERFAMILY SSF50249 128 185 3.43E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 SMART SM00841 128 184 1.1E-29 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 48.031 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.3E-18 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 JE55_RS03085 da89c8cd15a725c4059dff67394b4e68 185 SMART SM01185 67 120 1.2E-20 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 JE55_RS06090 7bcc2d69eec3c89d885f4ef61c850acc 216 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JE55_RS06090 7bcc2d69eec3c89d885f4ef61c850acc 216 Gene3D G3DSA:3.90.79.10 7 152 1.3E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS06090 7bcc2d69eec3c89d885f4ef61c850acc 216 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.025 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH JE55_RS06090 7bcc2d69eec3c89d885f4ef61c850acc 216 Pfam PF00293 NUDIX domain 7 136 7.7E-22 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 JE55_RS06090 7bcc2d69eec3c89d885f4ef61c850acc 216 PRINTS PR00502 NUDIX hydrolase family signature 47 62 5.4E-6 T 22-04-2016 IPR020476 NUDIX hydrolase JE55_RS06090 7bcc2d69eec3c89d885f4ef61c850acc 216 PRINTS PR00502 NUDIX hydrolase family signature 33 47 5.4E-6 T 22-04-2016 IPR020476 NUDIX hydrolase JE55_RS06090 7bcc2d69eec3c89d885f4ef61c850acc 216 SUPERFAMILY SSF55811 6 156 7.85E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS06090 7bcc2d69eec3c89d885f4ef61c850acc 216 PANTHER PTHR23114 1 156 5.1E-39 T 22-04-2016 JE55_RS06360 faee347c4d83a8af7e310497e2137e1e 557 Gene3D G3DSA:3.30.300.30 458 554 3.4E-29 T 22-04-2016 JE55_RS06360 faee347c4d83a8af7e310497e2137e1e 557 Pfam PF13193 AMP-binding enzyme C-terminal domain 472 546 2.1E-19 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS06360 faee347c4d83a8af7e310497e2137e1e 557 SUPERFAMILY SSF56801 20 554 2.09E-146 T 22-04-2016 JE55_RS06360 faee347c4d83a8af7e310497e2137e1e 557 Gene3D G3DSA:3.40.50.980 214 382 2.1E-39 T 22-04-2016 JE55_RS06360 faee347c4d83a8af7e310497e2137e1e 557 Gene3D G3DSA:3.40.50.980 24 151 8.4E-36 T 22-04-2016 JE55_RS06360 faee347c4d83a8af7e310497e2137e1e 557 Gene3D G3DSA:3.40.50.980 183 213 8.4E-36 T 22-04-2016 JE55_RS06360 faee347c4d83a8af7e310497e2137e1e 557 PANTHER PTHR24096 180 554 4.4E-162 T 22-04-2016 JE55_RS06360 faee347c4d83a8af7e310497e2137e1e 557 PANTHER PTHR24096 16 154 4.4E-162 T 22-04-2016 JE55_RS06360 faee347c4d83a8af7e310497e2137e1e 557 ProSitePatterns PS00455 Putative AMP-binding domain signature. 209 220 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS06360 faee347c4d83a8af7e310497e2137e1e 557 Gene3D G3DSA:2.30.38.10 383 454 4.2E-30 T 22-04-2016 JE55_RS06360 faee347c4d83a8af7e310497e2137e1e 557 Pfam PF00501 AMP-binding enzyme 36 463 4.6E-102 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 493 594 2.2E-12 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 142 282 1.4E-37 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 SUPERFAMILY SSF55124 354 460 1.31E-18 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 Gene3D G3DSA:3.30.413.10 447 594 2.0E-33 T 22-04-2016 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 Gene3D G3DSA:3.90.480.10 48 140 5.8E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 Gene3D G3DSA:3.90.480.10 360 441 5.8E-26 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 PANTHER PTHR11493:SF47 1 79 7.6E-122 T 22-04-2016 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 PANTHER PTHR11493:SF47 366 601 7.6E-122 T 22-04-2016 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 PANTHER PTHR11493:SF47 103 319 7.6E-122 T 22-04-2016 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 SUPERFAMILY SSF56014 448 595 5.37E-37 T 22-04-2016 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 SUPERFAMILY SSF56014 143 305 3.4E-44 T 22-04-2016 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 SUPERFAMILY SSF55124 1 149 3.93E-19 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 PANTHER PTHR11493 1 79 7.6E-122 T 22-04-2016 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 PANTHER PTHR11493 366 601 7.6E-122 T 22-04-2016 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 PANTHER PTHR11493 103 319 7.6E-122 T 22-04-2016 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 375 437 8.6E-14 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 JE55_RS15010 424e5dd44ac48b66aafcad76f997beb5 605 Gene3D G3DSA:3.30.413.10 143 293 4.8E-40 T 22-04-2016 JE55_RS06020 8662e0c3350dfbdc6fc16ec5e6f198b3 475 Pfam PF13719 zinc-ribbon domain 3 39 1.4E-11 T 22-04-2016 IPR011723 Zinc finger/thioredoxin putative JE55_RS06020 8662e0c3350dfbdc6fc16ec5e6f198b3 475 Pfam PF11906 Protein of unknown function (DUF3426) 328 472 5.0E-37 T 22-04-2016 IPR021834 Protein of unknown function DUF3426 JE55_RS06020 8662e0c3350dfbdc6fc16ec5e6f198b3 475 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 4 39 6.4E-14 T 22-04-2016 IPR011723 Zinc finger/thioredoxin putative JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 SUPERFAMILY SSF52374 420 672 3.3E-142 T 22-04-2016 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 SUPERFAMILY SSF52374 7 225 3.3E-142 T 22-04-2016 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 Gene3D G3DSA:1.10.730.10 651 800 1.4E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 Pfam PF09334 tRNA synthetases class I (M) 38 171 9.5E-20 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 Gene3D G3DSA:3.40.50.620 7 226 6.0E-128 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 Gene3D G3DSA:3.40.50.620 494 577 6.0E-128 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 Gene3D G3DSA:3.40.50.620 623 650 6.0E-128 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 864 22.379 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 SUPERFAMILY SSF50677 225 419 3.24E-48 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 421 576 1.2E-8 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 623 663 8.6E-6 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 SUPERFAMILY SSF47323 668 864 1.4E-32 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 8 864 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 561 571 6.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 528 550 6.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 6.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PRINTS PR00985 Leucyl-tRNA synthetase signature 491 509 6.1E-47 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PANTHER PTHR11946:SF7 241 578 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PANTHER PTHR11946:SF7 623 864 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PANTHER PTHR11946:SF7 1 206 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 Gene3D G3DSA:3.90.740.10 227 461 2.2E-59 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PANTHER PTHR11946 241 578 0.0 T 22-04-2016 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PANTHER PTHR11946 623 864 0.0 T 22-04-2016 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 PANTHER PTHR11946 1 206 0.0 T 22-04-2016 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 Pfam PF08264 Anticodon-binding domain of tRNA 704 826 1.6E-16 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 JE55_RS05775 4e2fe1cc32efe37f5921ae40683240d3 864 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 407 2.6E-66 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 JE55_RS10050 d6b3e718a6787edc2da2676bab192854 339 SUPERFAMILY SSF53822 71 303 4.91E-52 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS10050 d6b3e718a6787edc2da2676bab192854 339 Gene3D G3DSA:3.40.50.2300 163 324 1.9E-47 T 22-04-2016 JE55_RS10050 d6b3e718a6787edc2da2676bab192854 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS10050 d6b3e718a6787edc2da2676bab192854 339 Gene3D G3DSA:1.10.260.40 3 48 6.9E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS10050 d6b3e718a6787edc2da2676bab192854 339 SUPERFAMILY SSF47413 3 51 1.31E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS10050 d6b3e718a6787edc2da2676bab192854 339 Pfam PF13377 Periplasmic binding protein-like domain 163 323 7.0E-31 T 22-04-2016 JE55_RS10050 d6b3e718a6787edc2da2676bab192854 339 Gene3D G3DSA:3.40.50.2300 71 162 2.4E-16 T 22-04-2016 JE55_RS10050 d6b3e718a6787edc2da2676bab192854 339 SMART SM00354 2 57 1.5E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS10050 d6b3e718a6787edc2da2676bab192854 339 PANTHER PTHR30146 1 328 6.7E-78 T 22-04-2016 JE55_RS10050 d6b3e718a6787edc2da2676bab192854 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 3.4E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS06630 8a336473b1cce0d2dc54d8ca32a6160e 533 PIRSF PIRSF006060 2 461 5.7E-75 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS06630 8a336473b1cce0d2dc54d8ca32a6160e 533 PANTHER PTHR11785:SF322 514 526 1.2E-148 T 22-04-2016 JE55_RS06630 8a336473b1cce0d2dc54d8ca32a6160e 533 PANTHER PTHR11785:SF322 3 460 1.2E-148 T 22-04-2016 JE55_RS06630 8a336473b1cce0d2dc54d8ca32a6160e 533 PANTHER PTHR11785 514 526 1.2E-148 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS06630 8a336473b1cce0d2dc54d8ca32a6160e 533 PANTHER PTHR11785 3 460 1.2E-148 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS06630 8a336473b1cce0d2dc54d8ca32a6160e 533 Pfam PF13520 Amino acid permease 10 427 2.9E-48 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS07150 801098054c01922c10516290dd43a84b 410 Pfam PF01966 HD domain 101 231 2.1E-15 T 22-04-2016 IPR006674 HD domain JE55_RS07150 801098054c01922c10516290dd43a84b 410 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 41 405 38.213 T 22-04-2016 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 JE55_RS07150 801098054c01922c10516290dd43a84b 410 PANTHER PTHR11373 38 194 1.8E-85 T 22-04-2016 JE55_RS07150 801098054c01922c10516290dd43a84b 410 SUPERFAMILY SSF109604 52 406 2.01E-91 T 22-04-2016 JE55_RS07150 801098054c01922c10516290dd43a84b 410 PANTHER PTHR11373:SF25 38 194 1.8E-85 T 22-04-2016 JE55_RS07150 801098054c01922c10516290dd43a84b 410 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 64 197 9.8E-59 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 JE55_RS07150 801098054c01922c10516290dd43a84b 410 Pfam PF13286 Phosphohydrolase-associated domain 320 403 6.2E-26 T 22-04-2016 IPR026875 Phosphohydrolase-associated domain JE55_RS07150 801098054c01922c10516290dd43a84b 410 SMART SM00471 97 241 6.0E-11 T 22-04-2016 IPR003607 HD/PDEase domain JE55_RS07150 801098054c01922c10516290dd43a84b 410 Gene3D G3DSA:1.10.3210.10 307 406 3.6E-81 T 22-04-2016 IPR006674 HD domain JE55_RS07150 801098054c01922c10516290dd43a84b 410 Gene3D G3DSA:1.10.3210.10 62 250 3.6E-81 T 22-04-2016 IPR006674 HD domain JE55_RS14855 1f5ce58558376c1301876b63fe16eff3 263 PANTHER PTHR19372:SF9 1 261 7.0E-107 T 22-04-2016 JE55_RS14855 1f5ce58558376c1301876b63fe16eff3 263 PANTHER PTHR19372 1 261 7.0E-107 T 22-04-2016 JE55_RS14855 1f5ce58558376c1301876b63fe16eff3 263 Gene3D G3DSA:3.90.420.10 105 261 1.8E-52 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 JE55_RS14855 1f5ce58558376c1301876b63fe16eff3 263 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 252 2.3E-31 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 JE55_RS14855 1f5ce58558376c1301876b63fe16eff3 263 SUPERFAMILY SSF56524 60 262 9.68E-65 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 JE55_RS00205 708bd7a4af282a678b25514bb7824d0f 296 PANTHER PTHR21666 179 296 1.8E-40 T 22-04-2016 JE55_RS00205 708bd7a4af282a678b25514bb7824d0f 296 Pfam PF01551 Peptidase family M23 195 289 3.7E-29 T 22-04-2016 IPR016047 Peptidase M23 JE55_RS00205 708bd7a4af282a678b25514bb7824d0f 296 Pfam PF01476 LysM domain 68 111 2.1E-11 T 22-04-2016 IPR018392 LysM domain JE55_RS00205 708bd7a4af282a678b25514bb7824d0f 296 SMART SM00257 67 111 4.8E-11 T 22-04-2016 IPR018392 LysM domain JE55_RS00205 708bd7a4af282a678b25514bb7824d0f 296 SUPERFAMILY SSF51261 67 293 9.42E-49 T 22-04-2016 IPR011055 Duplicated hybrid motif JE55_RS00205 708bd7a4af282a678b25514bb7824d0f 296 Gene3D G3DSA:2.70.70.10 158 294 2.3E-39 T 22-04-2016 JE55_RS00205 708bd7a4af282a678b25514bb7824d0f 296 Gene3D G3DSA:3.10.350.10 66 111 2.1E-15 T 22-04-2016 IPR018392 LysM domain JE55_RS05260 818c4d24f7a7b0d3b8a24beee43a25ac 497 PANTHER PTHR11748:SF78 6 483 2.2E-180 T 22-04-2016 JE55_RS05260 818c4d24f7a7b0d3b8a24beee43a25ac 497 PANTHER PTHR11748 6 483 2.2E-180 T 22-04-2016 JE55_RS05260 818c4d24f7a7b0d3b8a24beee43a25ac 497 Gene3D G3DSA:3.30.43.10 9 107 3.2E-27 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 JE55_RS05260 818c4d24f7a7b0d3b8a24beee43a25ac 497 Gene3D G3DSA:1.10.45.10 430 470 1.7E-5 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JE55_RS05260 818c4d24f7a7b0d3b8a24beee43a25ac 497 Gene3D G3DSA:3.30.465.10 109 229 2.8E-31 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 JE55_RS05260 818c4d24f7a7b0d3b8a24beee43a25ac 497 Pfam PF01565 FAD binding domain 54 192 1.4E-40 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JE55_RS05260 818c4d24f7a7b0d3b8a24beee43a25ac 497 SUPERFAMILY SSF56176 18 229 6.54E-67 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS05260 818c4d24f7a7b0d3b8a24beee43a25ac 497 SUPERFAMILY SSF55103 203 472 2.62E-71 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JE55_RS05260 818c4d24f7a7b0d3b8a24beee43a25ac 497 Pfam PF02913 FAD linked oxidases, C-terminal domain 229 468 2.1E-61 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 Gene3D G3DSA:3.40.190.10 96 185 1.6E-15 T 22-04-2016 JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 SUPERFAMILY SSF53850 95 302 1.05E-35 T 22-04-2016 JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 Pfam PF03466 LysR substrate binding domain 94 299 1.8E-36 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.6E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 Gene3D G3DSA:1.10.10.10 7 90 5.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 7.4E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 Gene3D G3DSA:3.40.190.10 186 263 3.4E-15 T 22-04-2016 JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 PANTHER PTHR30126 6 308 8.4E-123 T 22-04-2016 JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 PANTHER PTHR30126:SF25 6 308 8.4E-123 T 22-04-2016 JE55_RS03755 4bbed886458a594574629ee81b3460bc 310 SUPERFAMILY SSF46785 6 116 6.45E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 Gene3D G3DSA:2.40.10.10 180 292 1.4E-43 T 22-04-2016 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 SUPERFAMILY SSF50494 62 287 2.5E-66 T 22-04-2016 IPR009003 Peptidase S1, PA clan JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 PANTHER PTHR22939:SF93 58 386 1.3E-134 T 22-04-2016 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 PRINTS PR00834 HtrA/DegQ protease family signature 148 168 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 PRINTS PR00834 HtrA/DegQ protease family signature 127 139 2.8E-55 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 SUPERFAMILY SSF50156 250 374 3.55E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 63 389 4.6E-131 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 Pfam PF13180 PDZ domain 291 380 8.5E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 Pfam PF13365 Trypsin-like peptidase domain 118 252 4.8E-34 T 22-04-2016 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 PANTHER PTHR22939 58 386 1.3E-134 T 22-04-2016 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 Gene3D G3DSA:2.40.10.10 62 179 1.2E-38 T 22-04-2016 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 SMART SM00228 291 373 3.4E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS06930 d6ee354d59143dd4e864c6bb9b6dbec9 402 Gene3D G3DSA:2.30.42.10 293 387 1.3E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS10890 6c3940c0d20617fe56b48006b66bf77b 221 Gene3D G3DSA:3.40.50.150 9 194 2.7E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS10890 6c3940c0d20617fe56b48006b66bf77b 221 SUPERFAMILY SSF53335 9 201 1.1E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS10890 6c3940c0d20617fe56b48006b66bf77b 221 Pfam PF13649 Methyltransferase domain 45 141 4.7E-16 T 22-04-2016 JE55_RS10890 6c3940c0d20617fe56b48006b66bf77b 221 PANTHER PTHR10108 7 192 1.2E-24 T 22-04-2016 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 Gene3D G3DSA:1.25.40.10 19 110 2.1E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 Gene3D G3DSA:1.25.40.10 181 354 1.8E-33 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 SMART SM00028 275 308 1.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 SMART SM00028 207 240 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 SMART SM00028 54 87 18.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 SMART SM00028 309 342 0.0044 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 SMART SM00028 20 53 61.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 SUPERFAMILY SSF48452 167 352 1.33E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 SUPERFAMILY SSF48452 28 114 1.33E-30 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 Pfam PF13432 Tetratricopeptide repeat 33 87 3.6E-8 T 22-04-2016 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 Pfam PF13432 Tetratricopeptide repeat 248 308 1.1E-8 T 22-04-2016 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 Pfam PF13844 Glycosyl transferase family 41 560 748 2.8E-25 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 Pfam PF13844 Glycosyl transferase family 41 396 540 1.3E-20 T 22-04-2016 IPR029489 O-GlcNAc transferase, C-terminal UniPathway: UPA00378 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 PANTHER PTHR23083 27 100 4.3E-34 T 22-04-2016 JE55_RS08035 2b9968637863d1ceeb6fa7c8a4ecd67b 776 PANTHER PTHR23083 186 349 4.3E-34 T 22-04-2016 JE55_RS08670 76054c23f694500c9e33688eb595bb39 134 PANTHER PTHR38779:SF1 9 130 8.6E-21 T 22-04-2016 JE55_RS08670 76054c23f694500c9e33688eb595bb39 134 Pfam PF13633 Prokaryotic N-terminal methylation site 14 39 2.7E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08670 76054c23f694500c9e33688eb595bb39 134 Gene3D G3DSA:3.30.1300.30 44 123 5.8E-11 T 22-04-2016 JE55_RS08670 76054c23f694500c9e33688eb595bb39 134 TIGRFAM TIGR01707 gspI: type II secretion system protein I 15 112 1.9E-20 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 JE55_RS08670 76054c23f694500c9e33688eb595bb39 134 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 34 2.0E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08670 76054c23f694500c9e33688eb595bb39 134 SUPERFAMILY SSF54523 48 127 8.37E-19 T 22-04-2016 JE55_RS08670 76054c23f694500c9e33688eb595bb39 134 Pfam PF02501 Type II secretion system (T2SS), protein I 49 126 4.5E-23 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 JE55_RS08670 76054c23f694500c9e33688eb595bb39 134 PANTHER PTHR38779 9 130 8.6E-21 T 22-04-2016 JE55_RS02845 c07b800c235130752c1ffb84c02e1230 90 Pfam PF02586 SOS response associated peptidase (SRAP) 3 85 1.1E-9 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS02845 c07b800c235130752c1ffb84c02e1230 90 Gene3D G3DSA:3.90.1680.10 2 87 6.8E-13 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS02845 c07b800c235130752c1ffb84c02e1230 90 SUPERFAMILY SSF143081 2 87 9.42E-25 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS18575 59a8163243ec40975c16d170b3524642 414 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 252 285 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 JE55_RS18575 59a8163243ec40975c16d170b3524642 414 Gene3D G3DSA:3.40.980.10 161 287 2.2E-65 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS18575 59a8163243ec40975c16d170b3524642 414 Gene3D G3DSA:3.40.980.10 321 366 2.2E-65 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS18575 59a8163243ec40975c16d170b3524642 414 Pfam PF03454 MoeA C-terminal region (domain IV) 371 411 3.4E-4 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS18575 59a8163243ec40975c16d170b3524642 414 Pfam PF03453 MoeA N-terminal region (domain I and II) 7 166 1.7E-35 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS18575 59a8163243ec40975c16d170b3524642 414 Pfam PF00994 Probable molybdopterin binding domain 179 347 3.0E-26 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS18575 59a8163243ec40975c16d170b3524642 414 SUPERFAMILY SSF53218 174 283 1.83E-41 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS18575 59a8163243ec40975c16d170b3524642 414 SUPERFAMILY SSF53218 321 352 1.83E-41 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS18575 59a8163243ec40975c16d170b3524642 414 PANTHER PTHR10192 321 410 3.3E-134 T 22-04-2016 JE55_RS18575 59a8163243ec40975c16d170b3524642 414 PANTHER PTHR10192 4 294 3.3E-134 T 22-04-2016 JE55_RS18575 59a8163243ec40975c16d170b3524642 414 Gene3D G3DSA:3.90.105.10 141 160 1.0E-21 T 22-04-2016 JE55_RS18575 59a8163243ec40975c16d170b3524642 414 Gene3D G3DSA:3.90.105.10 26 48 1.0E-21 T 22-04-2016 JE55_RS18575 59a8163243ec40975c16d170b3524642 414 SUPERFAMILY SSF63882 4 174 4.84E-51 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS18575 59a8163243ec40975c16d170b3524642 414 SMART SM00852 179 349 2.1E-48 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS18575 59a8163243ec40975c16d170b3524642 414 SUPERFAMILY SSF63867 359 414 1.83E-7 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS18575 59a8163243ec40975c16d170b3524642 414 Gene3D G3DSA:2.170.190.11 49 140 1.9E-28 T 22-04-2016 JE55_RS03340 905d431e4aac11188b93477417859aad 168 Gene3D G3DSA:3.10.129.10 5 145 3.9E-46 T 22-04-2016 IPR029069 HotDog domain JE55_RS03340 905d431e4aac11188b93477417859aad 168 SUPERFAMILY SSF54637 8 155 9.97E-42 T 22-04-2016 IPR029069 HotDog domain JE55_RS03340 905d431e4aac11188b93477417859aad 168 Pfam PF03061 Thioesterase superfamily 28 102 1.3E-19 T 22-04-2016 IPR006683 Thioesterase domain JE55_RS03340 905d431e4aac11188b93477417859aad 168 PANTHER PTHR11049 5 149 3.3E-50 T 22-04-2016 JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 142 153 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 20 27 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 PANTHER PTHR11846 11 445 1.4E-228 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 Gene3D G3DSA:3.90.170.10 276 442 1.5E-63 T 22-04-2016 JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 SMART SM00788 13 441 5.5E-288 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 Gene3D G3DSA:1.10.300.10 113 205 1.5E-35 T 22-04-2016 JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 15 446 7.9E-172 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 SUPERFAMILY SSF52540 13 446 6.48E-169 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 Gene3D G3DSA:3.40.440.10 13 103 2.1E-69 T 22-04-2016 JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 Gene3D G3DSA:3.40.440.10 206 275 2.1E-69 T 22-04-2016 JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 448 210.219 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 JE55_RS00100 a155efb7a0d4e1e33cf6ff1b45d9090f 448 Pfam PF00709 Adenylosuccinate synthetase 14 440 1.2E-171 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 JE55_RS11750 df9064c1fff1c9615312d455fb92eb03 354 SUPERFAMILY SSF52540 124 317 6.06E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11750 df9064c1fff1c9615312d455fb92eb03 354 PANTHER PTHR30473:SF1 8 354 2.4E-153 T 22-04-2016 JE55_RS11750 df9064c1fff1c9615312d455fb92eb03 354 PANTHER PTHR30473 8 354 2.4E-153 T 22-04-2016 JE55_RS11750 df9064c1fff1c9615312d455fb92eb03 354 Pfam PF02562 PhoH-like protein 143 345 1.5E-93 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 JE55_RS11750 df9064c1fff1c9615312d455fb92eb03 354 Gene3D G3DSA:3.40.50.300 142 344 5.1E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10270 380b28ff582990cd37b39a3bbc0d8965 467 SMART SM00098 32 466 1.4E-90 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10270 380b28ff582990cd37b39a3bbc0d8965 467 PANTHER PTHR11596 30 455 1.6E-143 T 22-04-2016 JE55_RS10270 380b28ff582990cd37b39a3bbc0d8965 467 SUPERFAMILY SSF53649 23 466 3.79E-128 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 JE55_RS10270 380b28ff582990cd37b39a3bbc0d8965 467 Pfam PF00245 Alkaline phosphatase 31 465 3.7E-101 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10270 380b28ff582990cd37b39a3bbc0d8965 467 PRINTS PR00113 Alkaline phosphatase signature 31 51 6.6E-41 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10270 380b28ff582990cd37b39a3bbc0d8965 467 PRINTS PR00113 Alkaline phosphatase signature 141 161 6.6E-41 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10270 380b28ff582990cd37b39a3bbc0d8965 467 PRINTS PR00113 Alkaline phosphatase signature 279 308 6.6E-41 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10270 380b28ff582990cd37b39a3bbc0d8965 467 PRINTS PR00113 Alkaline phosphatase signature 195 205 6.6E-41 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 JE55_RS10270 380b28ff582990cd37b39a3bbc0d8965 467 Gene3D G3DSA:3.40.720.10 23 467 5.2E-146 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 JE55_RS03580 f872980ce910ef5dfb35c82301b24015 389 PANTHER PTHR23083 335 353 1.4E-13 T 22-04-2016 JE55_RS03580 f872980ce910ef5dfb35c82301b24015 389 PANTHER PTHR23083 10 282 1.4E-13 T 22-04-2016 JE55_RS03580 f872980ce910ef5dfb35c82301b24015 389 SUPERFAMILY SSF81901 40 251 8.63E-13 T 22-04-2016 JE55_RS03580 f872980ce910ef5dfb35c82301b24015 389 Pfam PF13432 Tetratricopeptide repeat 43 90 3.3E-5 T 22-04-2016 JE55_RS03580 f872980ce910ef5dfb35c82301b24015 389 Pfam PF13432 Tetratricopeptide repeat 185 241 9.7E-6 T 22-04-2016 JE55_RS03580 f872980ce910ef5dfb35c82301b24015 389 Gene3D G3DSA:1.25.40.10 41 311 2.5E-20 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS03580 f872980ce910ef5dfb35c82301b24015 389 SMART SM00028 70 103 25.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03580 f872980ce910ef5dfb35c82301b24015 389 SMART SM00028 36 69 32.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03580 f872980ce910ef5dfb35c82301b24015 389 SMART SM00028 180 213 20.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03580 f872980ce910ef5dfb35c82301b24015 389 SMART SM00028 214 247 91.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS03580 f872980ce910ef5dfb35c82301b24015 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 6 386 35.243 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 637 649 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 Gene3D G3DSA:1.20.1440.90 337 469 2.9E-21 T 22-04-2016 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 200 211 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 61 994 19.501 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 Pfam PF00311 Phosphoenolpyruvate carboxylase 197 994 4.1E-285 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 PANTHER PTHR30523 41 994 0.0 T 22-04-2016 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 SUPERFAMILY SSF51621 70 994 2.2E-298 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 PANTHER PTHR30523:SF0 41 994 0.0 T 22-04-2016 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 816 842 3.0E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 677 706 3.0E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 308 323 3.0E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 466 486 3.0E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 199 212 3.0E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 635 655 3.0E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JE55_RS13360 9e0ef7fd5209a2f3686474cd47b22224 994 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 251 267 3.0E-54 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 JE55_RS01710 f3732a15644eda6522f7e020fa67163f 303 SUPERFAMILY SSF75217 26 190 4.71E-36 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases JE55_RS01710 f3732a15644eda6522f7e020fa67163f 303 Pfam PF00588 SpoU rRNA Methylase family 31 182 2.9E-35 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JE55_RS01710 f3732a15644eda6522f7e020fa67163f 303 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 31 264 1.9E-59 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 JE55_RS01710 f3732a15644eda6522f7e020fa67163f 303 PANTHER PTHR12029 33 207 4.2E-31 T 22-04-2016 JE55_RS01710 f3732a15644eda6522f7e020fa67163f 303 Gene3D G3DSA:3.40.1280.10 30 186 4.7E-31 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS02750 38992f8aa20dbead92ce2bec5ded0734 287 Pfam PF08543 Phosphomethylpyrimidine kinase 64 258 3.0E-13 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 JE55_RS02750 38992f8aa20dbead92ce2bec5ded0734 287 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 1 284 50.967 T 22-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 JE55_RS02750 38992f8aa20dbead92ce2bec5ded0734 287 SUPERFAMILY SSF53613 1 282 3.43E-67 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS02750 38992f8aa20dbead92ce2bec5ded0734 287 PANTHER PTHR10534:SF0 1 281 2.3E-103 T 22-04-2016 JE55_RS02750 38992f8aa20dbead92ce2bec5ded0734 287 Gene3D G3DSA:3.40.1190.20 1 279 2.1E-82 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS02750 38992f8aa20dbead92ce2bec5ded0734 287 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 280 3.3E-100 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 JE55_RS02750 38992f8aa20dbead92ce2bec5ded0734 287 PANTHER PTHR10534 1 281 2.3E-103 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 JE55_RS09110 27ae833face943901d3b59bf29d4138d 537 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 537 222.863 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 JE55_RS09110 27ae833face943901d3b59bf29d4138d 537 Pfam PF04262 Glutamate-cysteine ligase 17 390 7.2E-161 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 JE55_RS09110 27ae833face943901d3b59bf29d4138d 537 SUPERFAMILY SSF55931 15 524 4.97E-185 T 22-04-2016 JE55_RS09110 27ae833face943901d3b59bf29d4138d 537 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 15 527 2.9E-190 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 JE55_RS09110 27ae833face943901d3b59bf29d4138d 537 PANTHER PTHR38761 10 535 3.3E-225 T 22-04-2016 JE55_RS11145 3dd65ff72e819ba138e4f215566a0707 210 PANTHER PTHR23327:SF0 1 198 1.4E-20 T 22-04-2016 JE55_RS11145 3dd65ff72e819ba138e4f215566a0707 210 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 205 6.0E-20 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 JE55_RS11145 3dd65ff72e819ba138e4f215566a0707 210 PANTHER PTHR23327 1 198 1.4E-20 T 22-04-2016 JE55_RS11145 3dd65ff72e819ba138e4f215566a0707 210 SMART SM00464 10 206 6.0E-7 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 JE55_RS11145 3dd65ff72e819ba138e4f215566a0707 210 SUPERFAMILY SSF88697 10 205 3.73E-48 T 22-04-2016 IPR015947 PUA-like domain JE55_RS08500 b4ca215e7633a55d711b88a63e3b6f83 385 PANTHER PTHR30483:SF7 9 382 6.1E-139 T 22-04-2016 JE55_RS08500 b4ca215e7633a55d711b88a63e3b6f83 385 Pfam PF13458 Periplasmic binding protein 25 376 1.8E-53 T 22-04-2016 IPR028081 Leucine-binding protein domain JE55_RS08500 b4ca215e7633a55d711b88a63e3b6f83 385 PANTHER PTHR30483 9 382 6.1E-139 T 22-04-2016 JE55_RS08500 b4ca215e7633a55d711b88a63e3b6f83 385 Gene3D G3DSA:3.40.50.2300 25 219 2.5E-44 T 22-04-2016 JE55_RS08500 b4ca215e7633a55d711b88a63e3b6f83 385 SUPERFAMILY SSF53822 26 382 1.47E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS08405 0f4511a106db8b97a45fe1ead9fade43 576 Gene3D G3DSA:2.30.38.10 389 461 1.4E-26 T 22-04-2016 JE55_RS08405 0f4511a106db8b97a45fe1ead9fade43 576 ProSitePatterns PS00455 Putative AMP-binding domain signature. 221 232 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS08405 0f4511a106db8b97a45fe1ead9fade43 576 Gene3D G3DSA:3.40.50.980 236 380 6.5E-50 T 22-04-2016 JE55_RS08405 0f4511a106db8b97a45fe1ead9fade43 576 Pfam PF13193 AMP-binding enzyme C-terminal domain 479 554 1.7E-19 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS08405 0f4511a106db8b97a45fe1ead9fade43 576 Gene3D G3DSA:3.40.50.980 31 235 9.6E-40 T 22-04-2016 JE55_RS08405 0f4511a106db8b97a45fe1ead9fade43 576 Pfam PF00501 AMP-binding enzyme 39 470 1.7E-108 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS08405 0f4511a106db8b97a45fe1ead9fade43 576 Gene3D G3DSA:3.30.300.30 467 566 2.7E-34 T 22-04-2016 JE55_RS08405 0f4511a106db8b97a45fe1ead9fade43 576 PANTHER PTHR24095 18 570 7.1E-208 T 22-04-2016 JE55_RS08405 0f4511a106db8b97a45fe1ead9fade43 576 SUPERFAMILY SSF56801 26 566 6.15E-161 T 22-04-2016 JE55_RS10910 2a99af16a351772ea7af4bbdd63d4a10 522 Gene3D G3DSA:3.40.50.980 7 162 2.3E-39 T 22-04-2016 JE55_RS10910 2a99af16a351772ea7af4bbdd63d4a10 522 Gene3D G3DSA:2.30.38.10 321 404 2.7E-19 T 22-04-2016 JE55_RS10910 2a99af16a351772ea7af4bbdd63d4a10 522 PANTHER PTHR24096 7 507 8.0E-115 T 22-04-2016 JE55_RS10910 2a99af16a351772ea7af4bbdd63d4a10 522 Gene3D G3DSA:3.40.50.980 163 320 3.3E-29 T 22-04-2016 JE55_RS10910 2a99af16a351772ea7af4bbdd63d4a10 522 Gene3D G3DSA:3.30.300.30 408 508 4.5E-25 T 22-04-2016 JE55_RS10910 2a99af16a351772ea7af4bbdd63d4a10 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 422 498 2.0E-13 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS10910 2a99af16a351772ea7af4bbdd63d4a10 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS10910 2a99af16a351772ea7af4bbdd63d4a10 522 Pfam PF00501 AMP-binding enzyme 13 413 4.4E-84 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS10910 2a99af16a351772ea7af4bbdd63d4a10 522 TIGRFAM TIGR03098 ligase_PEP_1: acyl-CoA ligase (AMP-forming), exosortase A-associated 7 505 2.3E-187 T 22-04-2016 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated JE55_RS10910 2a99af16a351772ea7af4bbdd63d4a10 522 SUPERFAMILY SSF56801 6 509 3.53E-132 T 22-04-2016 JE55_RS15255 57396b008e5d4b407ae9140d96011fcf 297 PANTHER PTHR30425 14 297 7.6E-118 T 22-04-2016 JE55_RS15255 57396b008e5d4b407ae9140d96011fcf 297 PANTHER PTHR30425:SF0 14 297 7.6E-118 T 22-04-2016 JE55_RS15255 57396b008e5d4b407ae9140d96011fcf 297 SUPERFAMILY SSF161098 41 290 1.68E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS15255 57396b008e5d4b407ae9140d96011fcf 297 Gene3D G3DSA:1.10.3720.10 82 293 7.9E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS15255 57396b008e5d4b407ae9140d96011fcf 297 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 34 294 3.0E-83 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 JE55_RS15255 57396b008e5d4b407ae9140d96011fcf 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 293 5.7E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PANTHER PTHR12737 157 299 4.6E-131 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PANTHER PTHR12737 7 95 4.6E-131 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PANTHER PTHR12737 322 418 4.6E-131 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 Hamap MF_00242 Arginine deiminase [arcA]. 5 416 48.399 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 Pfam PF02274 Amidinotransferase 22 413 2.2E-99 T 22-04-2016 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 Gene3D G3DSA:3.75.10.10 7 71 2.2E-133 T 22-04-2016 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 Gene3D G3DSA:3.75.10.10 157 417 2.2E-133 T 22-04-2016 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 SUPERFAMILY SSF55909 8 416 1.42E-142 T 22-04-2016 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 TIGRFAM TIGR01078 arcA: arginine deiminase 10 416 6.3E-164 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PRINTS PR01466 Bacterial arginine deiminase signature 6 26 2.6E-51 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PRINTS PR01466 Bacterial arginine deiminase signature 157 175 2.6E-51 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PRINTS PR01466 Bacterial arginine deiminase signature 352 369 2.6E-51 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PRINTS PR01466 Bacterial arginine deiminase signature 185 200 2.6E-51 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PRINTS PR01466 Bacterial arginine deiminase signature 395 413 2.6E-51 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PRINTS PR01466 Bacterial arginine deiminase signature 372 386 2.6E-51 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PIRSF PIRSF006356 1 416 4.3E-143 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PANTHER PTHR12737:SF13 157 299 4.6E-131 T 22-04-2016 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PANTHER PTHR12737:SF13 7 95 4.6E-131 T 22-04-2016 JE55_RS17280 930e3e65396ced49ec06194530e8d33e 418 PANTHER PTHR12737:SF13 322 418 4.6E-131 T 22-04-2016 JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 36 156 3.2E-14 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 Gene3D G3DSA:1.20.140.10 271 456 1.1E-53 T 22-04-2016 JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 Gene3D G3DSA:1.10.540.10 35 157 2.8E-22 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 2 32 6.5E-13 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 465 580 2.1E-29 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 161 270 1.0E-13 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 Gene3D G3DSA:2.40.110.10 160 270 5.3E-25 T 22-04-2016 JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 SUPERFAMILY SSF47203 281 457 7.73E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 PANTHER PTHR10909:SF296 3 474 9.9E-189 T 22-04-2016 JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 SUPERFAMILY SSF56645 35 293 3.4E-59 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 449 5.1E-27 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS03505 cab55b4d1c30edaff3ab08d415c1dc2b 596 PANTHER PTHR10909 3 474 9.9E-189 T 22-04-2016 JE55_RS13830 179fa641def307bf827709c1c514b4d1 290 SUPERFAMILY SSF54862 9 141 6.88E-29 T 22-04-2016 JE55_RS13830 179fa641def307bf827709c1c514b4d1 290 PANTHER PTHR11938 9 145 2.5E-48 T 22-04-2016 JE55_RS13830 179fa641def307bf827709c1c514b4d1 290 Pfam PF04060 Putative Fe-S cluster 15 47 7.2E-13 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 JE55_RS13830 179fa641def307bf827709c1c514b4d1 290 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 4 161 7.1E-66 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 JE55_RS13830 179fa641def307bf827709c1c514b4d1 290 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS13830 179fa641def307bf827709c1c514b4d1 290 PANTHER PTHR11938:SF64 9 145 2.5E-48 T 22-04-2016 JE55_RS13830 179fa641def307bf827709c1c514b4d1 290 Gene3D G3DSA:3.30.70.20 93 161 2.5E-16 T 22-04-2016 JE55_RS13830 179fa641def307bf827709c1c514b4d1 290 Pfam PF14697 4Fe-4S dicluster domain 80 134 8.7E-17 T 22-04-2016 JE55_RS13830 179fa641def307bf827709c1c514b4d1 290 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS13830 179fa641def307bf827709c1c514b4d1 290 Gene3D G3DSA:1.10.1060.10 19 92 2.8E-4 T 22-04-2016 JE55_RS09295 4cb4124ca9a737ed9c7a822e70a522f9 803 SUPERFAMILY SSF56519 53 265 3.92E-46 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JE55_RS09295 4cb4124ca9a737ed9c7a822e70a522f9 803 Gene3D G3DSA:3.40.710.10 265 629 5.1E-109 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS09295 4cb4124ca9a737ed9c7a822e70a522f9 803 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 17 628 9.4E-230 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 JE55_RS09295 4cb4124ca9a737ed9c7a822e70a522f9 803 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 251 1.5E-40 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JE55_RS09295 4cb4124ca9a737ed9c7a822e70a522f9 803 Pfam PF00905 Penicillin binding protein transpeptidase domain 283 624 2.5E-68 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JE55_RS09295 4cb4124ca9a737ed9c7a822e70a522f9 803 Gene3D G3DSA:3.90.1310.10 128 264 4.3E-35 T 22-04-2016 JE55_RS09295 4cb4124ca9a737ed9c7a822e70a522f9 803 PANTHER PTHR30627:SF2 209 664 1.1E-216 T 22-04-2016 JE55_RS09295 4cb4124ca9a737ed9c7a822e70a522f9 803 PANTHER PTHR30627:SF2 2 193 1.1E-216 T 22-04-2016 JE55_RS09295 4cb4124ca9a737ed9c7a822e70a522f9 803 PANTHER PTHR30627 209 664 1.1E-216 T 22-04-2016 JE55_RS09295 4cb4124ca9a737ed9c7a822e70a522f9 803 PANTHER PTHR30627 2 193 1.1E-216 T 22-04-2016 JE55_RS09295 4cb4124ca9a737ed9c7a822e70a522f9 803 SUPERFAMILY SSF56601 266 627 1.6E-100 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS04380 8cdf7633371fa6d07e4f32870af19753 613 Gene3D G3DSA:3.90.550.10 312 523 3.3E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04380 8cdf7633371fa6d07e4f32870af19753 613 Gene3D G3DSA:3.90.550.10 2 199 1.5E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04380 8cdf7633371fa6d07e4f32870af19753 613 PANTHER PTHR22916 261 609 3.6E-27 T 22-04-2016 JE55_RS04380 8cdf7633371fa6d07e4f32870af19753 613 SUPERFAMILY SSF53448 312 520 4.55E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04380 8cdf7633371fa6d07e4f32870af19753 613 SUPERFAMILY SSF53448 4 202 4.71E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04380 8cdf7633371fa6d07e4f32870af19753 613 Pfam PF13641 Glycosyltransferase like family 2 143 198 8.3E-7 T 22-04-2016 JE55_RS04380 8cdf7633371fa6d07e4f32870af19753 613 Pfam PF00535 Glycosyl transferase family 2 5 114 9.3E-7 T 22-04-2016 IPR001173 Glycosyltransferase 2-like JE55_RS04380 8cdf7633371fa6d07e4f32870af19753 613 Pfam PF00535 Glycosyl transferase family 2 315 480 5.9E-21 T 22-04-2016 IPR001173 Glycosyltransferase 2-like JE55_RS04075 4512f35e42fa5f3ec7c2c29db273f900 339 PANTHER PTHR10314 1 324 2.5E-117 T 22-04-2016 JE55_RS04075 4512f35e42fa5f3ec7c2c29db273f900 339 SUPERFAMILY SSF53686 13 333 5.11E-86 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS04075 4512f35e42fa5f3ec7c2c29db273f900 339 PANTHER PTHR10314:SF105 1 324 2.5E-117 T 22-04-2016 JE55_RS04075 4512f35e42fa5f3ec7c2c29db273f900 339 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 16 333 1.8E-110 T 22-04-2016 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 JE55_RS04075 4512f35e42fa5f3ec7c2c29db273f900 339 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 323 5.4E-51 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS04075 4512f35e42fa5f3ec7c2c29db273f900 339 Gene3D G3DSA:3.40.50.1100 115 335 8.5E-67 T 22-04-2016 JE55_RS04075 4512f35e42fa5f3ec7c2c29db273f900 339 PIRSF PIRSF006278 1 339 5.3E-94 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase JE55_RS08830 d25ec86f2cc49f1d72895a8db202d77c 319 Gene3D G3DSA:2.60.120.10 74 133 2.0E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS08830 d25ec86f2cc49f1d72895a8db202d77c 319 SMART SM00342 228 313 1.1E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS08830 d25ec86f2cc49f1d72895a8db202d77c 319 Gene3D G3DSA:1.10.10.60 215 261 1.0E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS08830 d25ec86f2cc49f1d72895a8db202d77c 319 Gene3D G3DSA:1.10.10.60 264 315 2.7E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS08830 d25ec86f2cc49f1d72895a8db202d77c 319 PANTHER PTHR11019 75 312 1.3E-38 T 22-04-2016 JE55_RS08830 d25ec86f2cc49f1d72895a8db202d77c 319 PANTHER PTHR11019:SF50 75 312 1.3E-38 T 22-04-2016 JE55_RS08830 d25ec86f2cc49f1d72895a8db202d77c 319 Pfam PF14525 AraC-binding-like domain 21 195 2.7E-29 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JE55_RS08830 d25ec86f2cc49f1d72895a8db202d77c 319 SUPERFAMILY SSF46689 265 316 1.3E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS08830 d25ec86f2cc49f1d72895a8db202d77c 319 Pfam PF12833 Helix-turn-helix domain 234 315 6.0E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS08830 d25ec86f2cc49f1d72895a8db202d77c 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 313 2.0E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS08830 d25ec86f2cc49f1d72895a8db202d77c 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 297 2.0E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS13690 392fe4441dd7074b3eb5bedcd98b5d23 437 SUPERFAMILY SSF103473 11 420 4.71E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS13690 392fe4441dd7074b3eb5bedcd98b5d23 437 PANTHER PTHR23508 13 419 1.5E-139 T 22-04-2016 JE55_RS13690 392fe4441dd7074b3eb5bedcd98b5d23 437 PANTHER PTHR23508:SF1 13 419 1.5E-139 T 22-04-2016 JE55_RS13690 392fe4441dd7074b3eb5bedcd98b5d23 437 Pfam PF00083 Sugar (and other) transporter 17 226 2.8E-21 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JE55_RS13690 392fe4441dd7074b3eb5bedcd98b5d23 437 Gene3D G3DSA:1.20.1250.20 15 219 3.3E-21 T 22-04-2016 JE55_RS13690 392fe4441dd7074b3eb5bedcd98b5d23 437 Gene3D G3DSA:1.20.1250.20 240 420 1.1E-12 T 22-04-2016 JE55_RS03715 9544c7ac895153dff620b7349a849927 341 SUPERFAMILY SSF51556 9 334 1.04E-83 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS03715 9544c7ac895153dff620b7349a849927 341 PANTHER PTHR11409:SF41 9 336 1.2E-153 T 22-04-2016 JE55_RS03715 9544c7ac895153dff620b7349a849927 341 Pfam PF00962 Adenosine/AMP deaminase 12 331 2.3E-73 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 JE55_RS03715 9544c7ac895153dff620b7349a849927 341 PANTHER PTHR11409 9 336 1.2E-153 T 22-04-2016 JE55_RS03715 9544c7ac895153dff620b7349a849927 341 Hamap MF_01962 Adenine deaminase. 8 323 83.813 T 22-04-2016 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 JE55_RS03715 9544c7ac895153dff620b7349a849927 341 Gene3D G3DSA:3.20.20.140 9 338 1.8E-101 T 22-04-2016 JE55_RS03715 9544c7ac895153dff620b7349a849927 341 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 13 334 1.0E-112 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 JE55_RS20570 fdc1126e5a4f12c699e9685aa23adbda 199 SUPERFAMILY SSF51556 3 194 5.26E-46 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS20570 fdc1126e5a4f12c699e9685aa23adbda 199 Pfam PF01979 Amidohydrolase family 45 177 2.8E-16 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 JE55_RS20570 fdc1126e5a4f12c699e9685aa23adbda 199 PANTHER PTHR11271:SF4 1 198 2.2E-74 T 22-04-2016 IPR010252 Formiminoglutamate deiminase JE55_RS20570 fdc1126e5a4f12c699e9685aa23adbda 199 PANTHER PTHR11271 1 198 2.2E-74 T 22-04-2016 JE55_RS20570 fdc1126e5a4f12c699e9685aa23adbda 199 Gene3D G3DSA:3.20.20.140 3 196 2.4E-42 T 22-04-2016 JE55_RS08905 0b28e7eba87ab99958139f0ecf4ae8d3 357 SUPERFAMILY SSF46689 230 277 1.79E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS08905 0b28e7eba87ab99958139f0ecf4ae8d3 357 PANTHER PTHR11019:SF68 52 337 1.1E-33 T 22-04-2016 JE55_RS08905 0b28e7eba87ab99958139f0ecf4ae8d3 357 PANTHER PTHR11019 52 337 1.1E-33 T 22-04-2016 JE55_RS08905 0b28e7eba87ab99958139f0ecf4ae8d3 357 Gene3D G3DSA:3.40.50.880 37 203 5.8E-28 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS08905 0b28e7eba87ab99958139f0ecf4ae8d3 357 Gene3D G3DSA:1.10.10.60 226 281 7.6E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS08905 0b28e7eba87ab99958139f0ecf4ae8d3 357 SUPERFAMILY SSF46689 280 331 1.3E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS08905 0b28e7eba87ab99958139f0ecf4ae8d3 357 Gene3D G3DSA:1.10.10.60 282 334 4.5E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS08905 0b28e7eba87ab99958139f0ecf4ae8d3 357 Pfam PF12833 Helix-turn-helix domain 250 329 8.8E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS08905 0b28e7eba87ab99958139f0ecf4ae8d3 357 SMART SM00342 244 327 2.2E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS08905 0b28e7eba87ab99958139f0ecf4ae8d3 357 SUPERFAMILY SSF52317 15 204 1.21E-27 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 20 681 2.4E-253 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 SUPERFAMILY SSF56091 12 333 1.8E-113 T 22-04-2016 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Gene3D G3DSA:1.10.150.20 452 519 2.7E-26 T 22-04-2016 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 PIRSF PIRSF001604 7 690 9.4E-244 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 612 682 3.2E-12 T 22-04-2016 IPR001357 BRCT domain JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 SUPERFAMILY SSF50249 335 417 9.08E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Pfam PF12826 Helix-hairpin-helix motif 527 590 1.2E-26 T 22-04-2016 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 SUPERFAMILY SSF47781 420 597 1.56E-63 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 PANTHER PTHR23389 14 550 1.9E-194 T 22-04-2016 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Gene3D G3DSA:3.40.50.10190 611 690 1.3E-25 T 22-04-2016 IPR001357 BRCT domain JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Gene3D G3DSA:3.30.470.30 136 269 1.1E-50 T 22-04-2016 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 PANTHER PTHR23389:SF9 14 550 1.9E-194 T 22-04-2016 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Gene3D G3DSA:1.10.150.20 521 597 4.8E-33 T 22-04-2016 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Gene3D G3DSA:1.10.287.610 11 75 7.1E-29 T 22-04-2016 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 SMART SM00532 12 465 3.8E-258 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 SMART SM00278 561 580 37.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 SMART SM00278 529 548 190.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 SMART SM00278 497 516 310.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 SMART SM00278 463 482 140.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Hamap MF_01588 DNA ligase [ligA]. 11 686 54.931 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Gene3D G3DSA:2.40.50.140 336 407 1.1E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 SUPERFAMILY SSF52113 610 686 4.86E-19 T 22-04-2016 IPR001357 BRCT domain JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 339 415 1.9E-35 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 SMART SM00292 612 689 2.7E-14 T 22-04-2016 IPR001357 BRCT domain JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 15 335 4.5E-120 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 348 363 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 424 451 8.3E-11 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 132 161 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site JE55_RS01225 e38ad7ba317bf52ec9e295a3665deabb 691 Pfam PF14520 Helix-hairpin-helix domain 464 519 1.7E-4 T 22-04-2016 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 32 567 9.2E-225 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 Gene3D G3DSA:3.40.50.620 32 100 5.9E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 Gene3D G3DSA:3.40.50.620 220 275 5.9E-42 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 SUPERFAMILY SSF52374 32 358 2.36E-93 T 22-04-2016 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 PANTHER PTHR11451 13 255 5.2E-215 T 22-04-2016 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 PANTHER PTHR11451 280 567 5.2E-215 T 22-04-2016 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 PANTHER PTHR11451:SF29 13 255 5.2E-215 T 22-04-2016 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 PANTHER PTHR11451:SF29 280 567 5.2E-215 T 22-04-2016 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 32 335 7.0E-104 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 Gene3D G3DSA:2.40.240.10 477 563 5.1E-33 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 Gene3D G3DSA:3.90.800.10 109 217 6.0E-46 T 22-04-2016 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 353 544 2.9E-59 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 Gene3D G3DSA:1.10.1160.10 276 351 4.7E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 38 49 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 47 1.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 PRINTS PR00987 Glutamyl-tRNA synthetase signature 49 60 1.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 PRINTS PR00987 Glutamyl-tRNA synthetase signature 218 228 1.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 PRINTS PR00987 Glutamyl-tRNA synthetase signature 64 77 1.1E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 565 53.549 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 SUPERFAMILY SSF50715 353 564 3.82E-75 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 JE55_RS15825 a9afb79239f91bf7845387520e3835e1 569 Gene3D G3DSA:2.40.240.10 361 476 1.5E-49 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 JE55_RS13395 8a766a65b78aa3818a4a91c9e158466a 479 Gene3D G3DSA:3.40.605.10 3 261 7.6E-92 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS13395 8a766a65b78aa3818a4a91c9e158466a 479 PANTHER PTHR11699 2 478 2.3E-202 T 22-04-2016 JE55_RS13395 8a766a65b78aa3818a4a91c9e158466a 479 Gene3D G3DSA:3.40.309.10 262 450 4.5E-60 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS13395 8a766a65b78aa3818a4a91c9e158466a 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 JE55_RS13395 8a766a65b78aa3818a4a91c9e158466a 479 SUPERFAMILY SSF53720 3 477 9.95E-157 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS13395 8a766a65b78aa3818a4a91c9e158466a 479 Pfam PF00171 Aldehyde dehydrogenase family 12 474 3.4E-154 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS13395 8a766a65b78aa3818a4a91c9e158466a 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 468 32.772 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 SUPERFAMILY SSF52374 4 302 2.25E-109 T 22-04-2016 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 195 2.9E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 2.9E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 201 209 2.9E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 2.9E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 2.9E-24 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 465 4.7E-166 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 Gene3D G3DSA:1.10.10.350 373 468 9.1E-22 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 311 1.2E-97 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 PANTHER PTHR11451 3 321 5.6E-92 T 22-04-2016 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 SUPERFAMILY SSF48163 305 468 7.46E-40 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 Gene3D G3DSA:3.90.800.10 70 186 3.6E-35 T 22-04-2016 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 Gene3D G3DSA:1.10.1160.10 238 320 1.5E-35 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 Gene3D G3DSA:3.40.50.620 5 69 5.2E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 Gene3D G3DSA:3.40.50.620 187 236 5.2E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01430 d665b3ca468e0def7106e67ae59cc405 469 PANTHER PTHR11451:SF41 3 321 5.6E-92 T 22-04-2016 JE55_RS09640 18b97b951221bcbed5ec22866493df19 104 Pfam PF01355 High potential iron-sulfur protein 36 101 6.7E-26 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 JE55_RS09640 18b97b951221bcbed5ec22866493df19 104 Gene3D G3DSA:4.10.490.10 30 104 4.9E-34 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 JE55_RS09640 18b97b951221bcbed5ec22866493df19 104 SUPERFAMILY SSF57652 26 103 6.54E-28 T 22-04-2016 IPR000170 High potential iron-sulphur protein GO:0009055|GO:0019646 JE55_RS04935 638a7c05fc0af2a78622411955adba3b 144 PANTHER PTHR11717:SF14 1 142 4.0E-29 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS04935 638a7c05fc0af2a78622411955adba3b 144 PANTHER PTHR11717 1 142 4.0E-29 T 22-04-2016 JE55_RS04935 638a7c05fc0af2a78622411955adba3b 144 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 138 1.7E-31 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily JE55_RS04935 638a7c05fc0af2a78622411955adba3b 144 Gene3D G3DSA:3.40.50.270 3 141 7.2E-38 T 22-04-2016 JE55_RS04935 638a7c05fc0af2a78622411955adba3b 144 SMART SM00226 3 140 3.9E-39 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily JE55_RS04935 638a7c05fc0af2a78622411955adba3b 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 4.0E-14 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS04935 638a7c05fc0af2a78622411955adba3b 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 4.0E-14 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS04935 638a7c05fc0af2a78622411955adba3b 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 4.0E-14 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS04935 638a7c05fc0af2a78622411955adba3b 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 4.0E-14 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS04935 638a7c05fc0af2a78622411955adba3b 144 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 112 127 4.0E-14 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 JE55_RS04935 638a7c05fc0af2a78622411955adba3b 144 SUPERFAMILY SSF52788 2 141 8.77E-37 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily JE55_RS15180 d9cc14411eef63e1d5decf383e5c76ee 412 SUPERFAMILY SSF103473 5 398 3.01E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS15180 d9cc14411eef63e1d5decf383e5c76ee 412 Pfam PF07690 Major Facilitator Superfamily 16 346 5.7E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS15180 d9cc14411eef63e1d5decf383e5c76ee 412 PANTHER PTHR23512 4 364 5.2E-32 T 22-04-2016 JE55_RS15180 d9cc14411eef63e1d5decf383e5c76ee 412 PANTHER PTHR23512:SF1 4 364 5.2E-32 T 22-04-2016 JE55_RS15180 d9cc14411eef63e1d5decf383e5c76ee 412 Gene3D G3DSA:1.20.1250.20 208 400 2.1E-6 T 22-04-2016 JE55_RS15180 d9cc14411eef63e1d5decf383e5c76ee 412 Gene3D G3DSA:1.20.1250.20 8 196 2.1E-31 T 22-04-2016 JE55_RS11775 e77d8a55a8eeaa6ac4f5cdac8b7b2806 240 Gene3D G3DSA:3.90.870.10 29 232 2.0E-89 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS11775 e77d8a55a8eeaa6ac4f5cdac8b7b2806 240 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 25 227 41.785 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS11775 e77d8a55a8eeaa6ac4f5cdac8b7b2806 240 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 32 221 1.2E-78 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS11775 e77d8a55a8eeaa6ac4f5cdac8b7b2806 240 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 29 223 7.3E-72 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS11775 e77d8a55a8eeaa6ac4f5cdac8b7b2806 240 SUPERFAMILY SSF55821 28 225 2.75E-79 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS11775 e77d8a55a8eeaa6ac4f5cdac8b7b2806 240 PANTHER PTHR21327:SF15 29 225 2.5E-110 T 22-04-2016 JE55_RS11775 e77d8a55a8eeaa6ac4f5cdac8b7b2806 240 PANTHER PTHR21327 29 225 2.5E-110 T 22-04-2016 JE55_RS27430 ae17860223a939096ce897245a9e7e49 169 Gene3D G3DSA:3.40.50.1820 24 157 1.8E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS27430 ae17860223a939096ce897245a9e7e49 169 Pfam PF00561 alpha/beta hydrolase fold 48 162 1.0E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS27430 ae17860223a939096ce897245a9e7e49 169 PANTHER PTHR10992 25 169 2.0E-40 T 22-04-2016 JE55_RS27430 ae17860223a939096ce897245a9e7e49 169 SUPERFAMILY SSF53474 24 160 4.22E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS27430 ae17860223a939096ce897245a9e7e49 169 PRINTS PR00111 Alpha/beta hydrolase fold signature 73 88 9.0E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS27430 ae17860223a939096ce897245a9e7e49 169 PRINTS PR00111 Alpha/beta hydrolase fold signature 136 149 9.0E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS27430 ae17860223a939096ce897245a9e7e49 169 PANTHER PTHR10992:SF778 25 169 2.0E-40 T 22-04-2016 JE55_RS07950 9fbdb0fc3272b6af93544083cfc1d8a9 175 PANTHER PTHR22617 27 175 1.8E-51 T 22-04-2016 JE55_RS07950 9fbdb0fc3272b6af93544083cfc1d8a9 175 Pfam PF01584 CheW-like domain 29 165 1.7E-38 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 JE55_RS07950 9fbdb0fc3272b6af93544083cfc1d8a9 175 Gene3D G3DSA:2.30.30.40 104 155 1.3E-7 T 22-04-2016 JE55_RS07950 9fbdb0fc3272b6af93544083cfc1d8a9 175 SUPERFAMILY SSF50341 26 167 2.62E-40 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 JE55_RS07950 9fbdb0fc3272b6af93544083cfc1d8a9 175 SMART SM00260 25 162 1.6E-41 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 JE55_RS07950 9fbdb0fc3272b6af93544083cfc1d8a9 175 Gene3D G3DSA:2.40.50.180 67 103 7.5E-11 T 22-04-2016 JE55_RS02675 57f5fb258f4da4fcbb34913d5f3e87db 487 Pfam PF00171 Aldehyde dehydrogenase family 10 461 1.9E-119 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS02675 57f5fb258f4da4fcbb34913d5f3e87db 487 PANTHER PTHR11699:SF197 1 477 9.8E-244 T 22-04-2016 JE55_RS02675 57f5fb258f4da4fcbb34913d5f3e87db 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 JE55_RS02675 57f5fb258f4da4fcbb34913d5f3e87db 487 PANTHER PTHR11699 1 477 9.8E-244 T 22-04-2016 JE55_RS02675 57f5fb258f4da4fcbb34913d5f3e87db 487 SUPERFAMILY SSF53720 2 456 1.03E-123 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS02675 57f5fb258f4da4fcbb34913d5f3e87db 487 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 4 487 1.3E-255 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 JE55_RS02675 57f5fb258f4da4fcbb34913d5f3e87db 487 Gene3D G3DSA:3.40.309.10 258 444 1.2E-42 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS02675 57f5fb258f4da4fcbb34913d5f3e87db 487 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 2 487 57.325 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 JE55_RS02675 57f5fb258f4da4fcbb34913d5f3e87db 487 Gene3D G3DSA:3.40.605.10 2 257 3.0E-76 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS02675 57f5fb258f4da4fcbb34913d5f3e87db 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 JE55_RS03070 c51b520183abadd7115aed609f4efe35 197 PIRSF PIRSF000847 1 197 4.3E-45 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 JE55_RS03070 c51b520183abadd7115aed609f4efe35 197 PANTHER PTHR14269:SF13 2 190 1.1E-64 T 22-04-2016 JE55_RS03070 c51b520183abadd7115aed609f4efe35 197 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 190 5.3E-54 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 JE55_RS03070 c51b520183abadd7115aed609f4efe35 197 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 76 2.5E-17 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JE55_RS03070 c51b520183abadd7115aed609f4efe35 197 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 54 76 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JE55_RS03070 c51b520183abadd7115aed609f4efe35 197 PANTHER PTHR14269 2 190 1.1E-64 T 22-04-2016 JE55_RS12635 e8e6b653b547fb4156db9293c42894d7 163 PANTHER PTHR30411:SF0 10 154 2.3E-46 T 22-04-2016 JE55_RS12635 e8e6b653b547fb4156db9293c42894d7 163 PIRSF PIRSF006181 5 162 4.4E-46 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC JE55_RS12635 e8e6b653b547fb4156db9293c42894d7 163 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 10 155 2.0E-46 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC JE55_RS12635 e8e6b653b547fb4156db9293c42894d7 163 SUPERFAMILY SSF55826 7 161 5.49E-41 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JE55_RS12635 e8e6b653b547fb4156db9293c42894d7 163 Gene3D G3DSA:3.90.960.10 3 159 8.8E-48 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JE55_RS12635 e8e6b653b547fb4156db9293c42894d7 163 PANTHER PTHR30411 10 154 2.3E-46 T 22-04-2016 JE55_RS12635 e8e6b653b547fb4156db9293c42894d7 163 Pfam PF04073 Aminoacyl-tRNA editing domain 37 149 7.2E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JE55_RS14890 d1b935353528ed9148454b274976d095 274 PANTHER PTHR12905 1 15 1.0E-21 T 22-04-2016 JE55_RS14890 d1b935353528ed9148454b274976d095 274 PANTHER PTHR12905 37 214 1.0E-21 T 22-04-2016 JE55_RS14890 d1b935353528ed9148454b274976d095 274 PANTHER PTHR12905:SF7 1 15 1.0E-21 T 22-04-2016 JE55_RS14890 d1b935353528ed9148454b274976d095 274 PANTHER PTHR12905:SF7 37 214 1.0E-21 T 22-04-2016 JE55_RS14890 d1b935353528ed9148454b274976d095 274 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 256 39.637 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 JE55_RS14890 d1b935353528ed9148454b274976d095 274 Pfam PF00149 Calcineurin-like phosphoesterase 3 198 2.5E-18 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 JE55_RS14890 d1b935353528ed9148454b274976d095 274 Gene3D G3DSA:3.60.21.10 3 225 3.0E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS14890 d1b935353528ed9148454b274976d095 274 SUPERFAMILY SSF56300 1 257 3.65E-57 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS08265 5d79a5d8ed3a0c1833d083f1d1d4ff28 506 PANTHER PTHR11699 1 506 0.0 T 22-04-2016 JE55_RS08265 5d79a5d8ed3a0c1833d083f1d1d4ff28 506 Gene3D G3DSA:3.40.605.10 18 269 6.9E-92 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS08265 5d79a5d8ed3a0c1833d083f1d1d4ff28 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 1.1E-164 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS08265 5d79a5d8ed3a0c1833d083f1d1d4ff28 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 JE55_RS08265 5d79a5d8ed3a0c1833d083f1d1d4ff28 506 Gene3D G3DSA:3.40.309.10 270 469 5.9E-62 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS08265 5d79a5d8ed3a0c1833d083f1d1d4ff28 506 SUPERFAMILY SSF53720 8 498 1.57E-163 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS08265 5d79a5d8ed3a0c1833d083f1d1d4ff28 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 JE55_RS08265 5d79a5d8ed3a0c1833d083f1d1d4ff28 506 PANTHER PTHR11699:SF97 1 506 0.0 T 22-04-2016 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 Gene3D G3DSA:1.20.1270.10 533 606 1.5E-26 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 PANTHER PTHR19375:SF173 2 650 0.0 T 22-04-2016 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 SUPERFAMILY SSF100934 508 607 6.02E-20 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 PANTHER PTHR19375 2 650 0.0 T 22-04-2016 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 SUPERFAMILY SSF53067 4 183 3.08E-63 T 22-04-2016 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 SUPERFAMILY SSF53067 188 383 2.22E-69 T 22-04-2016 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 647 36.863 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 Gene3D G3DSA:3.90.640.10 231 316 1.6E-31 T 22-04-2016 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 Gene3D G3DSA:3.30.30.30 53 107 3.2E-24 T 22-04-2016 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 Gene3D G3DSA:3.30.420.40 4 52 5.7E-63 T 22-04-2016 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 Gene3D G3DSA:3.30.420.40 119 197 5.7E-63 T 22-04-2016 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 SUPERFAMILY SSF100920 385 540 1.7E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 Gene3D G3DSA:2.60.34.10 391 532 1.9E-71 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 Pfam PF00012 Hsp70 protein 4 606 2.1E-262 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.2E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.2E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 PRINTS PR00301 70kDa heat shock protein signature 199 209 2.2E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.2E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.2E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 PRINTS PR00301 70kDa heat shock protein signature 366 386 2.2E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 PRINTS PR00301 70kDa heat shock protein signature 389 408 2.2E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 PRINTS PR00301 70kDa heat shock protein signature 470 486 2.2E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 PRINTS PR00301 70kDa heat shock protein signature 335 351 2.2E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 606 5.6E-288 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 Gene3D G3DSA:3.30.420.40 320 362 5.9E-34 T 22-04-2016 JE55_RS05175 9a40f47860abc78039c656711d7a9365 650 Gene3D G3DSA:3.30.420.40 198 230 5.9E-34 T 22-04-2016 JE55_RS05685 83a87b18aa5db689bc79d9a2b71900f8 406 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 44 86 1.6E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger JE55_RS05685 83a87b18aa5db689bc79d9a2b71900f8 406 PANTHER PTHR33498 39 393 1.1E-47 T 22-04-2016 JE55_RS05685 83a87b18aa5db689bc79d9a2b71900f8 406 PANTHER PTHR33498:SF1 39 393 1.1E-47 T 22-04-2016 JE55_RS05685 83a87b18aa5db689bc79d9a2b71900f8 406 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 139 1.1E-12 T 22-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain JE55_RS05685 83a87b18aa5db689bc79d9a2b71900f8 406 Pfam PF01610 Transposase 157 397 3.3E-66 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JE55_RS11015 83a87b18aa5db689bc79d9a2b71900f8 406 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 44 86 1.6E-9 T 22-04-2016 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger JE55_RS11015 83a87b18aa5db689bc79d9a2b71900f8 406 PANTHER PTHR33498 39 393 1.1E-47 T 22-04-2016 JE55_RS11015 83a87b18aa5db689bc79d9a2b71900f8 406 PANTHER PTHR33498:SF1 39 393 1.1E-47 T 22-04-2016 JE55_RS11015 83a87b18aa5db689bc79d9a2b71900f8 406 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 139 1.1E-12 T 22-04-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain JE55_RS11015 83a87b18aa5db689bc79d9a2b71900f8 406 Pfam PF01610 Transposase 157 397 3.3E-66 T 22-04-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain JE55_RS02465 f1384e7ceef6c803949f557ab4cc4af7 336 Gene3D G3DSA:3.40.50.1820 6 302 7.6E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS02465 f1384e7ceef6c803949f557ab4cc4af7 336 PIRSF PIRSF037442 4 306 1.8E-106 T 22-04-2016 IPR017208 Uncharacterised conserved protein UCP037442, alpha/beta hydrolase, RSp0795 JE55_RS02465 f1384e7ceef6c803949f557ab4cc4af7 336 Pfam PF12146 Serine aminopeptidase, S33 51 251 1.5E-12 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 JE55_RS02465 f1384e7ceef6c803949f557ab4cc4af7 336 SUPERFAMILY SSF53474 7 299 2.53E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS02465 f1384e7ceef6c803949f557ab4cc4af7 336 PANTHER PTHR11614:SF82 17 324 7.6E-29 T 22-04-2016 JE55_RS02465 f1384e7ceef6c803949f557ab4cc4af7 336 PANTHER PTHR11614 17 324 7.6E-29 T 22-04-2016 JE55_RS03475 a6ceedf1212985792db8610fcee9ffd3 84 PANTHER PTHR12919 1 77 1.4E-34 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS03475 a6ceedf1212985792db8610fcee9ffd3 84 SUPERFAMILY SSF54565 1 78 2.62E-29 T 22-04-2016 IPR023803 Ribosomal protein S16 domain JE55_RS03475 a6ceedf1212985792db8610fcee9ffd3 84 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 77 23.206 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS03475 a6ceedf1212985792db8610fcee9ffd3 84 Gene3D G3DSA:3.30.1320.10 1 81 2.4E-32 T 22-04-2016 IPR023803 Ribosomal protein S16 domain JE55_RS03475 a6ceedf1212985792db8610fcee9ffd3 84 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 3.4E-28 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS03475 a6ceedf1212985792db8610fcee9ffd3 84 Pfam PF00886 Ribosomal protein S16 8 67 5.1E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07140 2790e4b520d1eb9a22fc6e77c09aa8c7 294 Gene3D G3DSA:1.10.3720.10 61 290 1.1E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS07140 2790e4b520d1eb9a22fc6e77c09aa8c7 294 PANTHER PTHR32243:SF13 4 292 5.0E-111 T 22-04-2016 JE55_RS07140 2790e4b520d1eb9a22fc6e77c09aa8c7 294 PANTHER PTHR32243 4 292 5.0E-111 T 22-04-2016 JE55_RS07140 2790e4b520d1eb9a22fc6e77c09aa8c7 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 291 1.4E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS07140 2790e4b520d1eb9a22fc6e77c09aa8c7 294 SUPERFAMILY SSF161098 55 281 1.15E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 506 2.7E-198 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 Gene3D G3DSA:3.30.930.10 156 503 4.0E-116 T 22-04-2016 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 2.2E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 2.2E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 389 405 2.2E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 2.2E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 2.2E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 PANTHER PTHR22594 1 508 3.1E-263 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 SUPERFAMILY SSF55681 161 505 4.42E-116 T 22-04-2016 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 Gene3D G3DSA:2.40.50.140 16 153 1.1E-46 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 507 44.001 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 Pfam PF01336 OB-fold nucleic acid binding domain 68 145 3.7E-14 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 504 1.2E-82 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 PANTHER PTHR22594:SF4 1 508 3.1E-263 T 22-04-2016 JE55_RS02130 8fec01f0339582da1b4e0f1114278a85 508 SUPERFAMILY SSF50249 14 154 2.14E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS11690 5e29b863c05102c18e2854a4e8b6bef6 312 PANTHER PTHR22911 17 304 2.6E-86 T 22-04-2016 JE55_RS11690 5e29b863c05102c18e2854a4e8b6bef6 312 SUPERFAMILY SSF103481 204 308 4.71E-13 T 22-04-2016 JE55_RS11690 5e29b863c05102c18e2854a4e8b6bef6 312 SUPERFAMILY SSF103481 50 151 3.53E-12 T 22-04-2016 JE55_RS11690 5e29b863c05102c18e2854a4e8b6bef6 312 PANTHER PTHR22911:SF63 17 304 2.6E-86 T 22-04-2016 JE55_RS11690 5e29b863c05102c18e2854a4e8b6bef6 312 Pfam PF00892 EamA-like transporter family 18 148 2.7E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS11690 5e29b863c05102c18e2854a4e8b6bef6 312 Pfam PF00892 EamA-like transporter family 169 304 3.2E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS00765 ca103184187c136561aca4fdcf1613de 381 SUPERFAMILY SSF46894 297 359 1.02E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS00765 ca103184187c136561aca4fdcf1613de 381 SMART SM00421 306 363 5.9E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS00765 ca103184187c136561aca4fdcf1613de 381 Gene3D G3DSA:1.10.10.10 303 359 8.0E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00765 ca103184187c136561aca4fdcf1613de 381 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 323 339 8.9E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS00765 ca103184187c136561aca4fdcf1613de 381 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 339 351 8.9E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS00765 ca103184187c136561aca4fdcf1613de 381 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 309 323 8.9E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS00765 ca103184187c136561aca4fdcf1613de 381 Pfam PF00196 Bacterial regulatory proteins, luxR family 308 358 8.7E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS01215 80352c8e97117533d0607b52d5d32177 249 PANTHER PTHR21600:SF25 1 243 5.5E-70 T 22-04-2016 JE55_RS01215 80352c8e97117533d0607b52d5d32177 249 Pfam PF00849 RNA pseudouridylate synthase 63 213 2.3E-12 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS01215 80352c8e97117533d0607b52d5d32177 249 SUPERFAMILY SSF55174 2 80 2.49E-16 T 22-04-2016 JE55_RS01215 80352c8e97117533d0607b52d5d32177 249 Gene3D G3DSA:3.10.290.10 1 54 3.0E-17 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS01215 80352c8e97117533d0607b52d5d32177 249 SMART SM00363 1 60 2.8E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS01215 80352c8e97117533d0607b52d5d32177 249 SUPERFAMILY SSF55120 61 247 1.92E-32 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS01215 80352c8e97117533d0607b52d5d32177 249 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 106 243 5.0E-33 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JE55_RS01215 80352c8e97117533d0607b52d5d32177 249 Pfam PF01479 S4 domain 1 47 5.7E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS01215 80352c8e97117533d0607b52d5d32177 249 PANTHER PTHR21600 1 243 5.5E-70 T 22-04-2016 JE55_RS09350 da33e01c0d56ed9bbaff6ac51e7b606c 314 PANTHER PTHR11019:SF134 36 305 5.5E-102 T 22-04-2016 JE55_RS09350 da33e01c0d56ed9bbaff6ac51e7b606c 314 PANTHER PTHR11019 36 305 5.5E-102 T 22-04-2016 JE55_RS09350 da33e01c0d56ed9bbaff6ac51e7b606c 314 Pfam PF06719 AraC-type transcriptional regulator N-terminus 36 185 1.5E-48 T 22-04-2016 IPR009594 Transcription regulator HTH, AraC, N-terminal JE55_RS09350 da33e01c0d56ed9bbaff6ac51e7b606c 314 Gene3D G3DSA:1.10.10.60 194 252 1.4E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS09350 da33e01c0d56ed9bbaff6ac51e7b606c 314 Pfam PF12833 Helix-turn-helix domain 220 295 1.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS09350 da33e01c0d56ed9bbaff6ac51e7b606c 314 SUPERFAMILY SSF46689 251 297 2.73E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS09350 da33e01c0d56ed9bbaff6ac51e7b606c 314 Gene3D G3DSA:1.10.10.60 253 295 4.0E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS09350 da33e01c0d56ed9bbaff6ac51e7b606c 314 SMART SM00342 214 297 7.8E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS09350 da33e01c0d56ed9bbaff6ac51e7b606c 314 SUPERFAMILY SSF46689 197 248 4.44E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 SMART SM00091 18 84 0.005 T 22-04-2016 IPR000014 PAS domain JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 Gene3D G3DSA:1.10.10.60 402 443 3.7E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 Gene3D G3DSA:1.10.8.60 316 393 1.7E-22 T 22-04-2016 JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 Pfam PF08448 PAS fold 24 133 2.6E-18 T 22-04-2016 IPR013656 PAS fold-4 JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 SUPERFAMILY SSF55785 22 126 1.73E-11 T 22-04-2016 IPR000014 PAS domain JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 SMART SM00382 164 307 2.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 SUPERFAMILY SSF52540 144 389 2.66E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 PANTHER PTHR32071 123 444 1.2E-125 T 22-04-2016 JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 Gene3D G3DSA:3.30.450.20 23 126 2.9E-10 T 22-04-2016 JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 Gene3D G3DSA:3.40.50.300 143 313 2.3E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 Pfam PF00158 Sigma-54 interaction domain 144 310 2.0E-62 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JE55_RS18155 705971bbea69dd00657c8b5308d660a5 449 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS01840 68bf366ec43730b1bce5f85316a8c243 297 PIRSF PIRSF020481 1 297 3.4E-91 T 22-04-2016 IPR014507 Baseplate assembly protein J, predicted JE55_RS01840 68bf366ec43730b1bce5f85316a8c243 297 Pfam PF04865 Baseplate J-like protein 112 235 1.7E-23 T 22-04-2016 IPR006949 Baseplate protein J-like JE55_RS01840 68bf366ec43730b1bce5f85316a8c243 297 PANTHER PTHR35862:SF1 1 297 1.8E-76 T 22-04-2016 JE55_RS01840 68bf366ec43730b1bce5f85316a8c243 297 PANTHER PTHR35862 1 297 1.8E-76 T 22-04-2016 JE55_RS07065 00532dd22891d1d4b6105e740a82099f 213 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 13 212 19.263 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 JE55_RS07065 00532dd22891d1d4b6105e740a82099f 213 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 25 205 5.0E-44 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 JE55_RS07065 00532dd22891d1d4b6105e740a82099f 213 SUPERFAMILY SSF51391 9 209 1.31E-57 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 JE55_RS07065 00532dd22891d1d4b6105e740a82099f 213 PANTHER PTHR20857 5 203 2.1E-50 T 22-04-2016 JE55_RS07065 00532dd22891d1d4b6105e740a82099f 213 Pfam PF02581 Thiamine monophosphate synthase/TENI 24 194 1.2E-48 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 JE55_RS07065 00532dd22891d1d4b6105e740a82099f 213 Gene3D G3DSA:3.20.20.70 8 211 9.0E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS00620 87c41ca93714f66e16121fb621651e16 546 Gene3D G3DSA:2.30.38.10 362 435 1.4E-15 T 22-04-2016 JE55_RS00620 87c41ca93714f66e16121fb621651e16 546 Pfam PF00501 AMP-binding enzyme 22 441 1.7E-80 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS00620 87c41ca93714f66e16121fb621651e16 546 Gene3D G3DSA:3.30.300.30 436 534 2.7E-25 T 22-04-2016 JE55_RS00620 87c41ca93714f66e16121fb621651e16 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 525 1.4E-15 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS00620 87c41ca93714f66e16121fb621651e16 546 SUPERFAMILY SSF56801 8 537 4.84E-128 T 22-04-2016 JE55_RS00620 87c41ca93714f66e16121fb621651e16 546 Gene3D G3DSA:3.40.50.980 17 193 9.5E-29 T 22-04-2016 JE55_RS00620 87c41ca93714f66e16121fb621651e16 546 PANTHER PTHR24096 9 536 4.5E-241 T 22-04-2016 JE55_RS00620 87c41ca93714f66e16121fb621651e16 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS00620 87c41ca93714f66e16121fb621651e16 546 Gene3D G3DSA:3.40.50.980 194 346 4.7E-33 T 22-04-2016 JE55_RS00620 87c41ca93714f66e16121fb621651e16 546 PANTHER PTHR24096:SF53 9 536 4.5E-241 T 22-04-2016 JE55_RS18040 3cd84aa9926bde4224f5027281f101da 341 Pfam PF10503 Esterase PHB depolymerase 247 321 7.3E-8 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 JE55_RS18040 3cd84aa9926bde4224f5027281f101da 341 Gene3D G3DSA:3.40.50.1820 211 338 1.5E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS18040 3cd84aa9926bde4224f5027281f101da 341 Gene3D G3DSA:3.40.50.1820 37 175 4.1E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS18040 3cd84aa9926bde4224f5027281f101da 341 SUPERFAMILY SSF53474 35 339 7.67E-75 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS07600 a063ca309f4ae09866b77904e360ed55 314 SUPERFAMILY SSF51735 1 131 4.78E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07600 a063ca309f4ae09866b77904e360ed55 314 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 3 305 1.9E-129 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS07600 a063ca309f4ae09866b77904e360ed55 314 SUPERFAMILY SSF55347 116 287 5.23E-35 T 22-04-2016 JE55_RS07600 a063ca309f4ae09866b77904e360ed55 314 SMART SM00859 4 105 2.5E-13 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JE55_RS07600 a063ca309f4ae09866b77904e360ed55 314 PANTHER PTHR32338:SF9 4 314 1.6E-89 T 22-04-2016 JE55_RS07600 a063ca309f4ae09866b77904e360ed55 314 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 306 50.682 T 22-04-2016 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS07600 a063ca309f4ae09866b77904e360ed55 314 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 44 101 1.0E-9 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 JE55_RS07600 a063ca309f4ae09866b77904e360ed55 314 PANTHER PTHR32338 4 314 1.6E-89 T 22-04-2016 JE55_RS07600 a063ca309f4ae09866b77904e360ed55 314 Gene3D G3DSA:3.40.50.720 34 124 8.2E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07600 a063ca309f4ae09866b77904e360ed55 314 Gene3D G3DSA:3.30.360.10 125 287 5.3E-36 T 22-04-2016 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 PANTHER PTHR11405:SF1 7 303 5.5E-135 T 22-04-2016 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 7.1E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 7.1E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 282 293 7.1E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 220 230 7.1E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 7.1E-29 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 SUPERFAMILY SSF53671 4 303 7.2E-104 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 304 77.384 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.5E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 1.5E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 1.5E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.5E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 Gene3D G3DSA:3.40.50.1370 6 143 1.9E-53 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 Gene3D G3DSA:3.40.50.1370 144 290 2.6E-59 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 3.9E-46 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 303 5.2E-109 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 PANTHER PTHR11405 7 303 5.5E-135 T 22-04-2016 JE55_RS12655 2a18ba2ef1b9e19d5dd3edefad7dc4a7 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 301 2.1E-50 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 105 592 1.9E-229 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 190 322 2.9E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 SUPERFAMILY SSF140990 404 601 1.44E-69 T 22-04-2016 JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 Gene3D G3DSA:1.10.8.60 334 407 5.1E-28 T 22-04-2016 JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 598 37.005 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 SUPERFAMILY SSF52540 149 393 7.84E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 Gene3D G3DSA:3.40.50.300 149 333 8.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 Pfam PF06480 FtsH Extracellular 11 77 1.3E-7 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 PANTHER PTHR23076 5 602 0.0 T 22-04-2016 JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 ProSitePatterns PS00674 AAA-protein family signature. 293 311 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 Pfam PF01434 Peptidase family M41 384 591 7.0E-76 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 JE55_RS15230 3e8d8ee8a2f9ab2e432e07cc9d24d3ae 628 SMART SM00382 186 325 1.3E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS13510 120b7fd1c3cd06919e4aed0edd8a3235 472 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 453 3.1E-181 T 22-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 JE55_RS13510 120b7fd1c3cd06919e4aed0edd8a3235 472 SUPERFAMILY SSF53756 2 455 1.63E-151 T 22-04-2016 JE55_RS13510 120b7fd1c3cd06919e4aed0edd8a3235 472 Gene3D G3DSA:3.40.50.2000 242 437 1.8E-77 T 22-04-2016 JE55_RS13510 120b7fd1c3cd06919e4aed0edd8a3235 472 PANTHER PTHR10788 1 455 1.6E-182 T 22-04-2016 JE55_RS13510 120b7fd1c3cd06919e4aed0edd8a3235 472 Gene3D G3DSA:3.40.50.2000 1 240 1.4E-72 T 22-04-2016 JE55_RS13510 120b7fd1c3cd06919e4aed0edd8a3235 472 Pfam PF00982 Glycosyltransferase family 20 16 453 2.9E-138 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 JE55_RS13510 120b7fd1c3cd06919e4aed0edd8a3235 472 PANTHER PTHR10788:SF6 1 455 1.6E-182 T 22-04-2016 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 Pfam PF00490 Delta-aminolevulinic acid dehydratase 7 326 3.3E-139 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 272 287 2.1E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 247 263 2.1E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 302 321 2.1E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 124 138 2.1E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 193 212 2.1E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 155 174 2.1E-57 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 SUPERFAMILY SSF51569 3 329 1.47E-144 T 22-04-2016 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 PIRSF PIRSF001415 1 331 1.9E-148 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 Gene3D G3DSA:3.20.20.70 3 330 5.7E-150 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 247 259 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 PANTHER PTHR11458 3 332 1.0E-180 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS07235 07cd7b061630be43e67a4c5dd5b9733b 332 SMART SM01004 4 328 4.8E-242 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS16600 6e30a1fff8d2ad619d83615d857f957c 342 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 295 315 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 JE55_RS16600 6e30a1fff8d2ad619d83615d857f957c 342 Gene3D G3DSA:3.20.20.70 3 340 1.5E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS16600 6e30a1fff8d2ad619d83615d857f957c 342 PANTHER PTHR11938 16 334 1.2E-92 T 22-04-2016 JE55_RS16600 6e30a1fff8d2ad619d83615d857f957c 342 SUPERFAMILY SSF51395 6 339 1.03E-103 T 22-04-2016 JE55_RS16600 6e30a1fff8d2ad619d83615d857f957c 342 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 5 339 51.771 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS16600 6e30a1fff8d2ad619d83615d857f957c 342 PIRSF PIRSF000164 14 341 4.7E-95 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 JE55_RS16600 6e30a1fff8d2ad619d83615d857f957c 342 Pfam PF01180 Dihydroorotate dehydrogenase 51 339 2.0E-89 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 JE55_RS16600 6e30a1fff8d2ad619d83615d857f957c 342 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 83 102 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 JE55_RS16600 6e30a1fff8d2ad619d83615d857f957c 342 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 6 340 7.6E-132 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS09665 07457a21825288a007e8f17d75aef0a4 330 Gene3D G3DSA:3.40.50.300 2 257 8.2E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09665 07457a21825288a007e8f17d75aef0a4 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 294 1.4E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JE55_RS09665 07457a21825288a007e8f17d75aef0a4 330 Pfam PF00005 ABC transporter 21 178 3.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS09665 07457a21825288a007e8f17d75aef0a4 330 SMART SM00382 29 228 2.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS09665 07457a21825288a007e8f17d75aef0a4 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 228 309 2.8E-22 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JE55_RS09665 07457a21825288a007e8f17d75aef0a4 330 PANTHER PTHR24220:SF576 6 321 1.4E-163 T 22-04-2016 JE55_RS09665 07457a21825288a007e8f17d75aef0a4 330 SUPERFAMILY SSF52540 29 300 1.16E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09665 07457a21825288a007e8f17d75aef0a4 330 PANTHER PTHR24220 6 321 1.4E-163 T 22-04-2016 JE55_RS04680 8c48f70d362ae11cb9d4af76615a49af 326 Gene3D G3DSA:3.40.190.10 92 178 1.3E-16 T 22-04-2016 JE55_RS04680 8c48f70d362ae11cb9d4af76615a49af 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.3E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS04680 8c48f70d362ae11cb9d4af76615a49af 326 Pfam PF03466 LysR substrate binding domain 89 295 3.5E-41 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS04680 8c48f70d362ae11cb9d4af76615a49af 326 Gene3D G3DSA:1.10.10.10 3 85 9.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04680 8c48f70d362ae11cb9d4af76615a49af 326 SUPERFAMILY SSF53850 89 299 4.65E-42 T 22-04-2016 JE55_RS04680 8c48f70d362ae11cb9d4af76615a49af 326 SUPERFAMILY SSF46785 4 84 6.86E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04680 8c48f70d362ae11cb9d4af76615a49af 326 Gene3D G3DSA:3.40.190.10 179 262 1.7E-22 T 22-04-2016 JE55_RS04680 8c48f70d362ae11cb9d4af76615a49af 326 PANTHER PTHR30537 1 292 6.4E-94 T 22-04-2016 JE55_RS04680 8c48f70d362ae11cb9d4af76615a49af 326 PANTHER PTHR30537:SF5 1 292 6.4E-94 T 22-04-2016 JE55_RS08660 be985fc7ac753e4c7a9c8efa550cb777 150 Pfam PF13633 Prokaryotic N-terminal methylation site 15 39 8.2E-11 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08660 be985fc7ac753e4c7a9c8efa550cb777 150 Gene3D G3DSA:3.30.700.10 18 84 2.6E-10 T 22-04-2016 JE55_RS08660 be985fc7ac753e4c7a9c8efa550cb777 150 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08660 be985fc7ac753e4c7a9c8efa550cb777 150 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 7.7E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08660 be985fc7ac753e4c7a9c8efa550cb777 150 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 16 150 5.7E-58 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 JE55_RS08660 be985fc7ac753e4c7a9c8efa550cb777 150 SUPERFAMILY SSF54523 44 149 2.09E-39 T 22-04-2016 JE55_RS08660 be985fc7ac753e4c7a9c8efa550cb777 150 PANTHER PTHR30093 5 150 3.2E-65 T 22-04-2016 JE55_RS08660 be985fc7ac753e4c7a9c8efa550cb777 150 PRINTS PR00813 Bacterial general secretion pathway protein G signature 53 71 5.49E-17 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 JE55_RS08660 be985fc7ac753e4c7a9c8efa550cb777 150 PRINTS PR00813 Bacterial general secretion pathway protein G signature 17 42 5.49E-17 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 JE55_RS08660 be985fc7ac753e4c7a9c8efa550cb777 150 PANTHER PTHR30093:SF9 5 150 3.2E-65 T 22-04-2016 JE55_RS08660 be985fc7ac753e4c7a9c8efa550cb777 150 Pfam PF08334 Type II secretion system (T2SS), protein G 40 149 1.5E-43 T 22-04-2016 IPR013545 Type II secretion system protein G JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 Gene3D G3DSA:3.40.50.1260 11 181 1.7E-63 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 PRINTS PR00477 Phosphoglycerate kinase family signature 315 340 3.3E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 PRINTS PR00477 Phosphoglycerate kinase family signature 15 31 3.3E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 PRINTS PR00477 Phosphoglycerate kinase family signature 139 161 3.3E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 PRINTS PR00477 Phosphoglycerate kinase family signature 111 126 3.3E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 PRINTS PR00477 Phosphoglycerate kinase family signature 371 388 3.3E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 3.3E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 3.3E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 PRINTS PR00477 Phosphoglycerate kinase family signature 348 359 3.3E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 PRINTS PR00477 Phosphoglycerate kinase family signature 37 59 3.3E-80 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 SUPERFAMILY SSF53748 12 395 4.71E-142 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 20 30 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 Pfam PF00162 Phosphoglycerate kinase 13 385 1.0E-140 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 PANTHER PTHR11406 1 394 3.3E-193 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 PIRSF PIRSF000724 2 397 2.0E-139 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 Gene3D G3DSA:3.40.50.1270 182 383 8.1E-84 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12270 b64d8029e702b1c2d20295261730520c 397 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 9 395 39.385 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 SMART SM00388 235 300 6.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 SUPERFAMILY SSF47384 223 299 2.94E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 SUPERFAMILY SSF52172 481 601 1.42E-22 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS12075 356673798aadecccac66c80aa94760ff 602 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 298 2.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 460 1.7E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12075 356673798aadecccac66c80aa94760ff 602 Gene3D G3DSA:1.10.287.130 228 294 1.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 PANTHER PTHR24423 222 600 3.5E-83 T 22-04-2016 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 PANTHER PTHR24423 45 80 3.5E-83 T 22-04-2016 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 SUPERFAMILY SSF55874 290 461 4.98E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12075 356673798aadecccac66c80aa94760ff 602 Gene3D G3DSA:3.30.565.10 304 463 2.4E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12075 356673798aadecccac66c80aa94760ff 602 Gene3D G3DSA:3.40.50.2300 481 600 1.4E-22 T 22-04-2016 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 8.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 8.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 8.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 8.5E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 SMART SM00387 346 461 1.4E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS12075 356673798aadecccac66c80aa94760ff 602 SMART SM00448 483 597 1.9E-19 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS12075 356673798aadecccac66c80aa94760ff 602 Pfam PF00072 Response regulator receiver domain 486 593 5.9E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS05970 e63a7c53909ed1928e99bb3c163c848e 292 PANTHER PTHR21089:SF2 13 287 8.4E-123 T 22-04-2016 JE55_RS05970 e63a7c53909ed1928e99bb3c163c848e 292 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 15 286 1.0E-77 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS05970 e63a7c53909ed1928e99bb3c163c848e 292 SUPERFAMILY SSF53223 12 111 5.64E-31 T 22-04-2016 JE55_RS05970 e63a7c53909ed1928e99bb3c163c848e 292 PANTHER PTHR21089 13 287 8.4E-123 T 22-04-2016 JE55_RS05970 e63a7c53909ed1928e99bb3c163c848e 292 Gene3D G3DSA:3.40.50.720 117 286 1.9E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05970 e63a7c53909ed1928e99bb3c163c848e 292 SUPERFAMILY SSF51735 112 285 3.07E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05970 e63a7c53909ed1928e99bb3c163c848e 292 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 127 177 2.4E-8 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JE55_RS05970 e63a7c53909ed1928e99bb3c163c848e 292 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 17 99 1.9E-24 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS05970 e63a7c53909ed1928e99bb3c163c848e 292 Gene3D G3DSA:3.40.192.10 11 116 3.7E-36 T 22-04-2016 JE55_RS05970 e63a7c53909ed1928e99bb3c163c848e 292 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 12 285 31.007 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS07340 53053cec1b02dff97d74bb937e4cd508 90 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 10 80 2.0E-35 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07340 53053cec1b02dff97d74bb937e4cd508 90 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 8 86 24.746 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07340 53053cec1b02dff97d74bb937e4cd508 90 PANTHER PTHR10744 11 88 1.0E-36 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07340 53053cec1b02dff97d74bb937e4cd508 90 ProSitePatterns PS00056 Ribosomal protein S17 signature. 61 73 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07340 53053cec1b02dff97d74bb937e4cd508 90 SUPERFAMILY SSF50249 10 88 9.85E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07340 53053cec1b02dff97d74bb937e4cd508 90 Pfam PF00366 Ribosomal protein S17 15 81 6.3E-32 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07340 53053cec1b02dff97d74bb937e4cd508 90 Gene3D G3DSA:2.40.50.140 10 87 5.1E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07340 53053cec1b02dff97d74bb937e4cd508 90 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 1.2E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07340 53053cec1b02dff97d74bb937e4cd508 90 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 1.2E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07340 53053cec1b02dff97d74bb937e4cd508 90 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 1.2E-13 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07340 53053cec1b02dff97d74bb937e4cd508 90 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 10 80 3.4E-36 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS04890 e385160215339bf5eb0537d21642a86d 311 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 44 309 1.7E-97 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 JE55_RS04890 e385160215339bf5eb0537d21642a86d 311 SUPERFAMILY SSF54631 263 309 1.48E-5 T 22-04-2016 JE55_RS04890 e385160215339bf5eb0537d21642a86d 311 PIRSF PIRSF004692 1 311 7.5E-122 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 JE55_RS04890 e385160215339bf5eb0537d21642a86d 311 Gene3D G3DSA:3.40.50.10490 8 193 2.8E-49 T 22-04-2016 JE55_RS04890 e385160215339bf5eb0537d21642a86d 311 Pfam PF00571 CBS domain 265 309 1.2E-5 T 22-04-2016 IPR000644 CBS domain JE55_RS04890 e385160215339bf5eb0537d21642a86d 311 PANTHER PTHR38418 5 298 3.6E-41 T 22-04-2016 JE55_RS04890 e385160215339bf5eb0537d21642a86d 311 Gene3D G3DSA:3.10.580.10 194 309 1.9E-23 T 22-04-2016 JE55_RS04890 e385160215339bf5eb0537d21642a86d 311 Pfam PF01380 SIS domain 40 170 4.4E-28 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS04890 e385160215339bf5eb0537d21642a86d 311 SUPERFAMILY SSF53697 4 264 1.78E-57 T 22-04-2016 JE55_RS04300 a86b2c403de4cd87ab27f8c4925dfc3e 201 SUPERFAMILY SSF69737 78 144 5.75E-21 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 JE55_RS04300 a86b2c403de4cd87ab27f8c4925dfc3e 201 Gene3D G3DSA:3.30.70.790 78 149 8.6E-33 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 JE55_RS04300 a86b2c403de4cd87ab27f8c4925dfc3e 201 SUPERFAMILY SSF69287 2 76 8.5E-17 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal JE55_RS04300 a86b2c403de4cd87ab27f8c4925dfc3e 201 SMART SM00988 8 71 8.6E-21 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal JE55_RS04300 a86b2c403de4cd87ab27f8c4925dfc3e 201 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 145 24.506 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 JE55_RS04300 a86b2c403de4cd87ab27f8c4925dfc3e 201 Pfam PF05194 UreE urease accessory protein, C-terminal domain 78 182 6.9E-21 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 JE55_RS04300 a86b2c403de4cd87ab27f8c4925dfc3e 201 Pfam PF02814 UreE urease accessory protein, N-terminal domain 16 71 3.3E-20 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal JE55_RS04300 a86b2c403de4cd87ab27f8c4925dfc3e 201 Gene3D G3DSA:2.60.260.20 11 75 5.4E-18 T 22-04-2016 JE55_RS04975 56ca7968927189ececb921d0f6631dae 230 Gene3D G3DSA:3.40.630.30 22 205 1.5E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS04975 56ca7968927189ececb921d0f6631dae 230 SUPERFAMILY SSF55729 25 208 2.98E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS04975 56ca7968927189ececb921d0f6631dae 230 Pfam PF00583 Acetyltransferase (GNAT) family 143 201 4.7E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS11100 66d9fa8fdc5b90c812e6cd200594b286 201 PANTHER PTHR17224 2 198 3.7E-73 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JE55_RS11100 66d9fa8fdc5b90c812e6cd200594b286 201 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 190 35.81 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JE55_RS11100 66d9fa8fdc5b90c812e6cd200594b286 201 Pfam PF01195 Peptidyl-tRNA hydrolase 4 195 9.2E-56 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JE55_RS11100 66d9fa8fdc5b90c812e6cd200594b286 201 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 JE55_RS11100 66d9fa8fdc5b90c812e6cd200594b286 201 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 197 2.7E-59 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JE55_RS11100 66d9fa8fdc5b90c812e6cd200594b286 201 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 109 119 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 JE55_RS11100 66d9fa8fdc5b90c812e6cd200594b286 201 Gene3D G3DSA:3.40.50.1470 1 198 3.4E-70 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JE55_RS11100 66d9fa8fdc5b90c812e6cd200594b286 201 PANTHER PTHR17224:SF1 2 198 3.7E-73 T 22-04-2016 JE55_RS11100 66d9fa8fdc5b90c812e6cd200594b286 201 SUPERFAMILY SSF53178 1 197 2.09E-65 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 JE55_RS13145 2e084b096caf655452627b686ed3e1ec 296 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 290 20.335 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 JE55_RS13145 2e084b096caf655452627b686ed3e1ec 296 PANTHER PTHR30589:SF0 1 289 3.0E-106 T 22-04-2016 JE55_RS13145 2e084b096caf655452627b686ed3e1ec 296 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 141 153 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 JE55_RS13145 2e084b096caf655452627b686ed3e1ec 296 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 4 290 2.0E-87 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 JE55_RS13145 2e084b096caf655452627b686ed3e1ec 296 PANTHER PTHR30589 1 289 3.0E-106 T 22-04-2016 JE55_RS13145 2e084b096caf655452627b686ed3e1ec 296 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 285 5.5E-80 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 PANTHER PTHR32071:SF34 84 454 3.1E-145 T 22-04-2016 JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 407 424 9.782294E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 444 9.782294E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 Gene3D G3DSA:1.10.10.60 393 443 4.2E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 SUPERFAMILY SSF46689 355 443 2.81E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 SUPERFAMILY SSF52172 19 187 2.98E-6 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 Pfam PF02954 Bacterial regulatory protein, Fis family 401 436 3.3E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 SMART SM00382 163 306 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 Gene3D G3DSA:3.40.50.300 140 315 1.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 SUPERFAMILY SSF52540 143 385 1.38E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 PANTHER PTHR32071 84 454 3.1E-145 T 22-04-2016 JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 Gene3D G3DSA:1.10.8.60 316 389 5.3E-24 T 22-04-2016 JE55_RS03365 1ee851d23d23ceecdf93699b1d01a434 461 Pfam PF00158 Sigma-54 interaction domain 144 309 2.0E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JE55_RS16560 94453294af78ed76662854dfb26c5f67 247 Gene3D G3DSA:3.40.1280.10 95 246 3.4E-53 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS16560 94453294af78ed76662854dfb26c5f67 247 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 4 244 44.104 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB JE55_RS16560 94453294af78ed76662854dfb26c5f67 247 Pfam PF00588 SpoU rRNA Methylase family 97 237 1.4E-39 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 JE55_RS16560 94453294af78ed76662854dfb26c5f67 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 243 2.7E-72 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 JE55_RS16560 94453294af78ed76662854dfb26c5f67 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 79 7.8E-15 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 JE55_RS16560 94453294af78ed76662854dfb26c5f67 247 SMART SM00967 6 82 5.1E-15 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 JE55_RS16560 94453294af78ed76662854dfb26c5f67 247 Gene3D G3DSA:3.30.1330.30 2 77 1.8E-20 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like JE55_RS16560 94453294af78ed76662854dfb26c5f67 247 SUPERFAMILY SSF55315 3 78 1.41E-16 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like JE55_RS16560 94453294af78ed76662854dfb26c5f67 247 SUPERFAMILY SSF75217 92 244 4.45E-48 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases JE55_RS16560 94453294af78ed76662854dfb26c5f67 247 PANTHER PTHR12029 6 246 2.1E-64 T 22-04-2016 JE55_RS06770 8c8abfde86ca69d790f9628718928207 167 SUPERFAMILY SSF141452 1 162 1.1E-47 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp JE55_RS06770 8c8abfde86ca69d790f9628718928207 167 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 15 147 1.3E-25 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp JE55_RS06770 8c8abfde86ca69d790f9628718928207 167 PANTHER PTHR36152 13 161 1.5E-25 T 22-04-2016 JE55_RS06770 8c8abfde86ca69d790f9628718928207 167 Pfam PF05638 Type VI secretion system effector, Hcp 7 138 1.0E-39 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp JE55_RS06770 8c8abfde86ca69d790f9628718928207 167 Gene3D G3DSA:2.30.110.20 2 163 4.4E-53 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp JE55_RS07990 44f8d04fa71060b392ff1ac42c44535d 98 SMART SM00528 58 97 6.5E-5 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 JE55_RS07990 44f8d04fa71060b392ff1ac42c44535d 98 SUPERFAMILY SSF81273 61 97 1.41E-9 T 22-04-2016 JE55_RS07990 44f8d04fa71060b392ff1ac42c44535d 98 Gene3D G3DSA:4.10.430.10 63 97 1.7E-5 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 JE55_RS07990 44f8d04fa71060b392ff1ac42c44535d 98 Pfam PF00816 H-NS histone family 6 88 8.7E-25 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 JE55_RS05150 29add0f6e121a8ed5fcb3e9b81f06d05 175 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 132 6.9E-35 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 JE55_RS05150 29add0f6e121a8ed5fcb3e9b81f06d05 175 PANTHER PTHR20941 1 141 7.1E-52 T 22-04-2016 JE55_RS05150 29add0f6e121a8ed5fcb3e9b81f06d05 175 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 87 98 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 JE55_RS05150 29add0f6e121a8ed5fcb3e9b81f06d05 175 SUPERFAMILY SSF55083 1 142 2.35E-48 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 JE55_RS05150 29add0f6e121a8ed5fcb3e9b81f06d05 175 Gene3D G3DSA:3.30.70.560 3 142 6.7E-50 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 JE55_RS05150 29add0f6e121a8ed5fcb3e9b81f06d05 175 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 132 1.5E-38 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 JE55_RS11685 c8d0cf5ddbf497f2fce2c90315e2f350 275 Gene3D G3DSA:1.10.8.100 207 269 2.6E-19 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like JE55_RS11685 c8d0cf5ddbf497f2fce2c90315e2f350 275 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 10 269 53.359 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 JE55_RS11685 c8d0cf5ddbf497f2fce2c90315e2f350 275 Gene3D G3DSA:3.40.50.150 4 202 1.2E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS11685 c8d0cf5ddbf497f2fce2c90315e2f350 275 Pfam PF00398 Ribosomal RNA adenine dimethylase 12 234 1.3E-49 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JE55_RS11685 c8d0cf5ddbf497f2fce2c90315e2f350 275 PANTHER PTHR11727 5 267 8.1E-74 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JE55_RS11685 c8d0cf5ddbf497f2fce2c90315e2f350 275 SUPERFAMILY SSF53335 7 268 6.68E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS11685 c8d0cf5ddbf497f2fce2c90315e2f350 275 SMART SM00650 26 202 2.8E-69 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 JE55_RS11685 c8d0cf5ddbf497f2fce2c90315e2f350 275 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 12 267 2.2E-72 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 SUPERFAMILY SSF47794 359 418 8.79E-15 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 SUPERFAMILY SSF50249 136 201 7.17E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 Pfam PF00575 S1 RNA binding domain 139 198 1.1E-8 T 22-04-2016 IPR003029 S1 domain GO:0003676 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 344 5.1E-123 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 Gene3D G3DSA:2.40.50.140 139 200 1.4E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 SMART SM00322 303 376 6.1E-4 T 22-04-2016 IPR004087 K Homology domain GO:0003676 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 SMART SM00322 232 295 41.0 T 22-04-2016 IPR004087 K Homology domain GO:0003676 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 PANTHER PTHR22648:SF0 1 448 7.0E-162 T 22-04-2016 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 Pfam PF14520 Helix-hairpin-helix domain 432 487 3.6E-10 T 22-04-2016 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 SUPERFAMILY SSF54814 202 280 6.21E-29 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 Gene3D G3DSA:3.30.300.20 201 279 1.8E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 412 29.413 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 Pfam PF13184 NusA-like KH domain 232 299 2.8E-24 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 Gene3D G3DSA:3.30.300.20 280 348 2.2E-28 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 SUPERFAMILY SSF69705 1 129 4.58E-40 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 Gene3D G3DSA:1.10.150.20 433 490 5.7E-21 T 22-04-2016 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 Gene3D G3DSA:1.10.150.20 359 422 3.1E-20 T 22-04-2016 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 PANTHER PTHR22648 1 448 7.0E-162 T 22-04-2016 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 SMART SM00316 136 202 1.4E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 Gene3D G3DSA:3.30.1480.10 1 128 7.1E-45 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 Pfam PF08529 NusA N-terminal domain 4 127 7.3E-37 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 SUPERFAMILY SSF47794 433 490 7.53E-14 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 SUPERFAMILY SSF54814 281 344 4.19E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 367 416 2.1E-18 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication JE55_RS16310 9a9213d96406c8fff128537fb3005a62 491 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 489 3.9E-17 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication JE55_RS06625 644005112b37f51fbc233a4af25df746 262 SUPERFAMILY SSF53213 3 259 6.02E-89 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 JE55_RS06625 644005112b37f51fbc233a4af25df746 262 PIRSF PIRSF006157 1 260 3.6E-93 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 JE55_RS06625 644005112b37f51fbc233a4af25df746 262 Gene3D G3DSA:3.40.830.10 1 259 6.1E-94 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 JE55_RS06625 644005112b37f51fbc233a4af25df746 262 PANTHER PTHR30096 1 262 2.8E-102 T 22-04-2016 JE55_RS06625 644005112b37f51fbc233a4af25df746 262 PANTHER PTHR30096:SF0 1 262 2.8E-102 T 22-04-2016 JE55_RS06625 644005112b37f51fbc233a4af25df746 262 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 258 2.4E-47 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 JE55_RS05130 1df128537b0da1f8da209c351d0cc5c2 351 Pfam PF02769 AIR synthase related protein, C-terminal domain 183 346 1.1E-39 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS05130 1df128537b0da1f8da209c351d0cc5c2 351 SUPERFAMILY SSF56042 177 347 1.79E-61 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS05130 1df128537b0da1f8da209c351d0cc5c2 351 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 13 340 5.2E-140 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 JE55_RS05130 1df128537b0da1f8da209c351d0cc5c2 351 Pfam PF00586 AIR synthase related protein, N-terminal domain 70 170 2.0E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain JE55_RS05130 1df128537b0da1f8da209c351d0cc5c2 351 SUPERFAMILY SSF55326 13 176 1.2E-53 T 22-04-2016 JE55_RS05130 1df128537b0da1f8da209c351d0cc5c2 351 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 13 349 47.554 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 JE55_RS05130 1df128537b0da1f8da209c351d0cc5c2 351 PANTHER PTHR10520 13 350 5.0E-213 T 22-04-2016 JE55_RS05130 1df128537b0da1f8da209c351d0cc5c2 351 Gene3D G3DSA:3.90.650.10 177 348 8.4E-70 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS05130 1df128537b0da1f8da209c351d0cc5c2 351 Gene3D G3DSA:3.30.1330.10 28 176 2.4E-63 T 22-04-2016 IPR016188 PurM-like, N-terminal domain JE55_RS06675 eaa636d6ac445879dbb0b514864c53c6 372 PANTHER PTHR23028 6 177 4.9E-21 T 22-04-2016 JE55_RS06675 eaa636d6ac445879dbb0b514864c53c6 372 PANTHER PTHR23028 194 356 4.9E-21 T 22-04-2016 JE55_RS06675 eaa636d6ac445879dbb0b514864c53c6 372 Pfam PF01757 Acyltransferase family 12 323 1.3E-31 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 JE55_RS09440 9c2e64d9ce944777cffc6d1cc4a35726 289 Gene3D G3DSA:3.10.310.10 1 121 7.2E-55 T 22-04-2016 JE55_RS09440 9c2e64d9ce944777cffc6d1cc4a35726 289 PANTHER PTHR31689 1 289 6.4E-120 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS09440 9c2e64d9ce944777cffc6d1cc4a35726 289 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS09440 9c2e64d9ce944777cffc6d1cc4a35726 289 Pfam PF01678 Diaminopimelate epimerase 162 279 1.2E-26 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS09440 9c2e64d9ce944777cffc6d1cc4a35726 289 Pfam PF01678 Diaminopimelate epimerase 5 126 9.1E-33 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS09440 9c2e64d9ce944777cffc6d1cc4a35726 289 Gene3D G3DSA:3.10.310.10 122 263 3.0E-48 T 22-04-2016 JE55_RS09440 9c2e64d9ce944777cffc6d1cc4a35726 289 SUPERFAMILY SSF54506 3 287 1.7E-50 T 22-04-2016 JE55_RS09440 9c2e64d9ce944777cffc6d1cc4a35726 289 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 287 37.521 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS09440 9c2e64d9ce944777cffc6d1cc4a35726 289 PANTHER PTHR31689:SF0 1 289 6.4E-120 T 22-04-2016 JE55_RS09440 9c2e64d9ce944777cffc6d1cc4a35726 289 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 285 5.5E-87 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS12250 affd2c66b3edeef1871986473abccca5 65 Pfam PF10276 Zinc-finger domain 31 53 2.5E-7 T 22-04-2016 IPR019401 Zinc finger, CHCC-type JE55_RS12250 affd2c66b3edeef1871986473abccca5 65 Gene3D G3DSA:2.60.260.40 8 60 2.1E-18 T 22-04-2016 IPR019401 Zinc finger, CHCC-type JE55_RS13035 f366a7dbeff70d1a4c5e1870dee2779c 260 SMART SM01007 33 211 1.5E-46 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal JE55_RS13035 f366a7dbeff70d1a4c5e1870dee2779c 260 Gene3D G3DSA:3.40.225.10 29 239 2.7E-54 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal JE55_RS13035 f366a7dbeff70d1a4c5e1870dee2779c 260 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 34 211 3.4E-39 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal JE55_RS13035 f366a7dbeff70d1a4c5e1870dee2779c 260 PANTHER PTHR10672 22 247 7.8E-74 T 22-04-2016 JE55_RS13035 f366a7dbeff70d1a4c5e1870dee2779c 260 SUPERFAMILY SSF53639 29 238 1.55E-66 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal JE55_RS13035 f366a7dbeff70d1a4c5e1870dee2779c 260 PANTHER PTHR10672:SF17 22 247 7.8E-74 T 22-04-2016 JE55_RS01310 de7cd55e59ba3c67aed9a9c27ee356a9 435 Gene3D G3DSA:1.20.1250.20 5 194 6.6E-13 T 22-04-2016 JE55_RS01310 de7cd55e59ba3c67aed9a9c27ee356a9 435 PANTHER PTHR23513 1 309 3.2E-70 T 22-04-2016 JE55_RS01310 de7cd55e59ba3c67aed9a9c27ee356a9 435 PANTHER PTHR23513 328 423 3.2E-70 T 22-04-2016 JE55_RS01310 de7cd55e59ba3c67aed9a9c27ee356a9 435 PANTHER PTHR23513:SF8 1 309 3.2E-70 T 22-04-2016 JE55_RS01310 de7cd55e59ba3c67aed9a9c27ee356a9 435 PANTHER PTHR23513:SF8 328 423 3.2E-70 T 22-04-2016 JE55_RS01310 de7cd55e59ba3c67aed9a9c27ee356a9 435 Pfam PF07690 Major Facilitator Superfamily 9 356 1.2E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS01310 de7cd55e59ba3c67aed9a9c27ee356a9 435 SUPERFAMILY SSF103473 5 416 9.55E-23 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS18005 5426ab6fd91751744bb745aa5bd4bbd9 366 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 98 5.0E-17 T 22-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 JE55_RS18005 5426ab6fd91751744bb745aa5bd4bbd9 366 SUPERFAMILY SSF51735 1 171 9.36E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS18005 5426ab6fd91751744bb745aa5bd4bbd9 366 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 120 340 2.9E-15 T 22-04-2016 IPR032095 Saccharopine dehydrogenase, C-terminal JE55_RS18005 5426ab6fd91751744bb745aa5bd4bbd9 366 SUPERFAMILY SSF55347 121 363 2.55E-60 T 22-04-2016 JE55_RS18005 5426ab6fd91751744bb745aa5bd4bbd9 366 Gene3D G3DSA:3.30.360.10 135 261 2.0E-18 T 22-04-2016 JE55_RS18005 5426ab6fd91751744bb745aa5bd4bbd9 366 Gene3D G3DSA:3.40.50.720 1 134 3.3E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS09095 bc41d46a6ef4c3c4b011bfbab8988e8f 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 129 3.4E-12 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JE55_RS09095 bc41d46a6ef4c3c4b011bfbab8988e8f 138 Gene3D G3DSA:3.10.180.10 9 133 5.9E-27 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS09095 bc41d46a6ef4c3c4b011bfbab8988e8f 138 PANTHER PTHR10374:SF9 3 132 1.7E-22 T 22-04-2016 JE55_RS09095 bc41d46a6ef4c3c4b011bfbab8988e8f 138 PANTHER PTHR10374 3 132 1.7E-22 T 22-04-2016 JE55_RS09095 bc41d46a6ef4c3c4b011bfbab8988e8f 138 SUPERFAMILY SSF54593 5 136 6.88E-27 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS11285 20187bc1e691da65dbfca8618a86110e 2031 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1646 1699 9.3E-13 T 22-04-2016 IPR022385 Rhs repeat-associated core GO:0097264 JE55_RS11285 20187bc1e691da65dbfca8618a86110e 2031 Pfam PF13517 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella 470 533 5.1E-7 T 22-04-2016 JE55_RS11285 20187bc1e691da65dbfca8618a86110e 2031 Pfam PF03534 Salmonella virulence plasmid 65kDa B protein 34 84 5.9E-9 T 22-04-2016 IPR003284 Salmonella virulence plasmid 65kDa B protein GO:0005737 JE55_RS11285 20187bc1e691da65dbfca8618a86110e 2031 Pfam PF12256 Insecticide toxin TcdB middle/N-terminal region 566 692 1.1E-18 T 22-04-2016 IPR022045 Insecticide toxin TcdB middle/N-terminal JE55_RS11285 20187bc1e691da65dbfca8618a86110e 2031 SUPERFAMILY SSF69318 303 567 2.75E-26 T 22-04-2016 JE55_RS12810 be7638f978aa276378b5dc734e4e2213 192 Pfam PF00849 RNA pseudouridylate synthase 3 148 9.3E-15 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS12810 be7638f978aa276378b5dc734e4e2213 192 SUPERFAMILY SSF55120 3 185 1.46E-38 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS12810 be7638f978aa276378b5dc734e4e2213 192 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 38 52 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 JE55_RS12810 be7638f978aa276378b5dc734e4e2213 192 PANTHER PTHR21600 2 104 1.1E-63 T 22-04-2016 JE55_RS12810 be7638f978aa276378b5dc734e4e2213 192 PANTHER PTHR21600 122 182 1.1E-63 T 22-04-2016 JE55_RS12810 be7638f978aa276378b5dc734e4e2213 192 PANTHER PTHR21600:SF23 2 104 1.1E-63 T 22-04-2016 JE55_RS12810 be7638f978aa276378b5dc734e4e2213 192 PANTHER PTHR21600:SF23 122 182 1.1E-63 T 22-04-2016 JE55_RS12810 be7638f978aa276378b5dc734e4e2213 192 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 7 179 2.2E-46 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JE55_RS01355 8aba434950e4e24ab65609ad3906c438 435 PIRSF PIRSF001362 1 431 2.9E-236 T 22-04-2016 JE55_RS01355 8aba434950e4e24ab65609ad3906c438 435 Pfam PF00463 Isocitrate lyase family 253 425 4.4E-44 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 JE55_RS01355 8aba434950e4e24ab65609ad3906c438 435 Pfam PF00463 Isocitrate lyase family 9 252 5.5E-61 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 JE55_RS01355 8aba434950e4e24ab65609ad3906c438 435 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 7 252 2.4E-112 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 JE55_RS01355 8aba434950e4e24ab65609ad3906c438 435 Gene3D G3DSA:3.20.20.60 4 411 3.7E-167 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS01355 8aba434950e4e24ab65609ad3906c438 435 PANTHER PTHR21631 1 428 1.9E-169 T 22-04-2016 JE55_RS01355 8aba434950e4e24ab65609ad3906c438 435 ProSitePatterns PS00161 Isocitrate lyase signature. 190 195 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 JE55_RS01355 8aba434950e4e24ab65609ad3906c438 435 SUPERFAMILY SSF51621 4 428 6.73E-158 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 Gene3D G3DSA:1.10.10.10 233 283 4.0E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 PANTHER PTHR26402:SF474 85 214 1.4E-15 T 22-04-2016 JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 Pfam PF00196 Bacterial regulatory proteins, luxR family 242 283 2.2E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 PANTHER PTHR26402:SF474 233 283 1.4E-15 T 22-04-2016 JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 Pfam PF06490 Flagellar regulatory protein FleQ 88 183 4.3E-5 T 22-04-2016 IPR010518 Flagellar regulatory FleQ JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 PANTHER PTHR26402 85 214 1.4E-15 T 22-04-2016 JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 SUPERFAMILY SSF46894 230 283 1.22E-12 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 257 273 4.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 243 257 4.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 273 283 4.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 Gene3D G3DSA:3.40.50.2300 83 209 1.1E-10 T 22-04-2016 JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 SUPERFAMILY SSF52172 83 206 2.26E-14 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 PANTHER PTHR26402 233 283 1.4E-15 T 22-04-2016 JE55_RS31420 cba094c32b3ffd9eace478c942f41223 283 SMART SM00421 240 283 0.0025 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS14120 725794c974dd7c32245da54c6fcac88a 209 TIGRFAM TIGR00172 maf: septum formation protein Maf 12 203 2.7E-46 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 JE55_RS14120 725794c974dd7c32245da54c6fcac88a 209 Gene3D G3DSA:3.90.950.10 12 207 6.2E-61 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like JE55_RS14120 725794c974dd7c32245da54c6fcac88a 209 Pfam PF02545 Maf-like protein 12 204 1.9E-48 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 JE55_RS14120 725794c974dd7c32245da54c6fcac88a 209 PIRSF PIRSF006305 7 208 8.0E-47 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 JE55_RS14120 725794c974dd7c32245da54c6fcac88a 209 SUPERFAMILY SSF52972 10 203 7.85E-54 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like JE55_RS14120 725794c974dd7c32245da54c6fcac88a 209 Hamap MF_00528 Septum formation protein Maf [maf]. 11 209 30.019 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 Gene3D G3DSA:2.20.200.10 324 359 9.1E-21 T 22-04-2016 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 Gene3D G3DSA:2.20.200.10 110 150 9.1E-21 T 22-04-2016 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 PANTHER PTHR30203:SF15 7 492 2.5E-170 T 22-04-2016 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 SUPERFAMILY SSF56954 65 476 3.01E-118 T 22-04-2016 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 SUPERFAMILY SSF56954 1 31 3.01E-118 T 22-04-2016 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 Pfam PF02321 Outer membrane efflux protein 74 263 2.1E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 Pfam PF02321 Outer membrane efflux protein 293 472 1.3E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 PANTHER PTHR30203 7 492 2.5E-170 T 22-04-2016 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 Gene3D G3DSA:1.20.1600.10 361 475 1.5E-106 T 22-04-2016 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 Gene3D G3DSA:1.20.1600.10 62 100 1.5E-106 T 22-04-2016 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 Gene3D G3DSA:1.20.1600.10 151 323 1.5E-106 T 22-04-2016 JE55_RS12370 b9617e4051056e2978bcdc11fd77f322 514 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 474 1.3E-122 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 JE55_RS04325 12c7d7d2f3b1d10ba447d9f25f83410c 331 PANTHER PTHR30160:SF8 3 301 7.7E-61 T 22-04-2016 JE55_RS04325 12c7d7d2f3b1d10ba447d9f25f83410c 331 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 327 3.8E-122 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 JE55_RS04325 12c7d7d2f3b1d10ba447d9f25f83410c 331 Gene3D G3DSA:3.40.50.2000 2 160 5.5E-40 T 22-04-2016 JE55_RS04325 12c7d7d2f3b1d10ba447d9f25f83410c 331 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 313 2.5E-51 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 JE55_RS04325 12c7d7d2f3b1d10ba447d9f25f83410c 331 PANTHER PTHR30160 3 301 7.7E-61 T 22-04-2016 JE55_RS04325 12c7d7d2f3b1d10ba447d9f25f83410c 331 Gene3D G3DSA:3.40.50.2000 176 311 6.8E-33 T 22-04-2016 JE55_RS04325 12c7d7d2f3b1d10ba447d9f25f83410c 331 SUPERFAMILY SSF53756 2 316 1.05E-73 T 22-04-2016 JE55_RS13525 45d0fdc27ae957551e5ed7bc1e9332c7 457 Gene3D G3DSA:1.20.1250.20 264 448 2.6E-20 T 22-04-2016 JE55_RS13525 45d0fdc27ae957551e5ed7bc1e9332c7 457 Pfam PF07690 Major Facilitator Superfamily 20 408 5.6E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS13525 45d0fdc27ae957551e5ed7bc1e9332c7 457 SUPERFAMILY SSF103473 247 451 4.97E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS13525 45d0fdc27ae957551e5ed7bc1e9332c7 457 SUPERFAMILY SSF103473 7 198 4.97E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS13525 45d0fdc27ae957551e5ed7bc1e9332c7 457 PANTHER PTHR23501 6 451 1.7E-137 T 22-04-2016 JE55_RS13525 45d0fdc27ae957551e5ed7bc1e9332c7 457 PANTHER PTHR23501:SF5 6 451 1.7E-137 T 22-04-2016 JE55_RS13525 45d0fdc27ae957551e5ed7bc1e9332c7 457 Gene3D G3DSA:1.20.1250.20 12 195 3.5E-24 T 22-04-2016 JE55_RS13525 45d0fdc27ae957551e5ed7bc1e9332c7 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 9.0E-6 T 22-04-2016 JE55_RS13525 45d0fdc27ae957551e5ed7bc1e9332c7 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 9.0E-6 T 22-04-2016 JE55_RS13525 45d0fdc27ae957551e5ed7bc1e9332c7 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 9.0E-6 T 22-04-2016 JE55_RS13525 45d0fdc27ae957551e5ed7bc1e9332c7 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 9.0E-6 T 22-04-2016 JE55_RS16780 4886a99a790ebeac48b81797eb03cd02 320 PANTHER PTHR32196:SF9 26 318 1.5E-83 T 22-04-2016 JE55_RS16780 4886a99a790ebeac48b81797eb03cd02 320 Gene3D G3DSA:3.40.50.2300 162 302 3.7E-45 T 22-04-2016 JE55_RS16780 4886a99a790ebeac48b81797eb03cd02 320 Gene3D G3DSA:3.40.50.2300 32 161 1.8E-40 T 22-04-2016 JE55_RS16780 4886a99a790ebeac48b81797eb03cd02 320 SUPERFAMILY SSF53822 16 319 7.51E-74 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS16780 4886a99a790ebeac48b81797eb03cd02 320 Pfam PF13407 Periplasmic binding protein domain 38 298 3.8E-54 T 22-04-2016 IPR025997 Periplasmic binding protein JE55_RS16780 4886a99a790ebeac48b81797eb03cd02 320 PANTHER PTHR32196 26 318 1.5E-83 T 22-04-2016 JE55_RS12900 ccf34bbc082a2c9a74233443184fc8aa 378 Hamap MF_00567 Quinolinate synthase A [nadA]. 6 357 67.392 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 JE55_RS12900 ccf34bbc082a2c9a74233443184fc8aa 378 Pfam PF02445 Quinolinate synthetase A protein 44 350 6.0E-99 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 JE55_RS12900 ccf34bbc082a2c9a74233443184fc8aa 378 SUPERFAMILY SSF142754 41 351 3.66E-105 T 22-04-2016 JE55_RS12900 ccf34bbc082a2c9a74233443184fc8aa 378 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 38 351 6.1E-107 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 JE55_RS12900 ccf34bbc082a2c9a74233443184fc8aa 378 PANTHER PTHR30573 29 374 9.9E-145 T 22-04-2016 JE55_RS16755 132d2e3cc25732483cec417cb0e08cf0 345 Gene3D G3DSA:3.40.190.10 36 177 2.9E-51 T 22-04-2016 JE55_RS16755 132d2e3cc25732483cec417cb0e08cf0 345 Gene3D G3DSA:3.40.190.10 188 310 1.6E-28 T 22-04-2016 JE55_RS16755 132d2e3cc25732483cec417cb0e08cf0 345 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 160 168 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 JE55_RS16755 132d2e3cc25732483cec417cb0e08cf0 345 Pfam PF13531 Bacterial extracellular solute-binding protein 49 295 5.3E-47 T 22-04-2016 JE55_RS16755 132d2e3cc25732483cec417cb0e08cf0 345 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 35 341 9.8E-149 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 JE55_RS16755 132d2e3cc25732483cec417cb0e08cf0 345 SUPERFAMILY SSF53850 35 342 3.48E-92 T 22-04-2016 JE55_RS16755 132d2e3cc25732483cec417cb0e08cf0 345 PANTHER PTHR30368:SF2 13 345 9.3E-181 T 22-04-2016 JE55_RS16755 132d2e3cc25732483cec417cb0e08cf0 345 PANTHER PTHR30368 13 345 9.3E-181 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 JE55_RS16150 5e554c9797e58cf5d9bc8117e396be6c 185 Pfam PF07366 SnoaL-like polyketide cyclase 57 181 9.9E-39 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain JE55_RS16150 5e554c9797e58cf5d9bc8117e396be6c 185 PANTHER PTHR38436 33 185 1.1E-26 T 22-04-2016 JE55_RS16150 5e554c9797e58cf5d9bc8117e396be6c 185 SUPERFAMILY SSF54427 59 183 2.7E-30 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS16150 5e554c9797e58cf5d9bc8117e396be6c 185 Gene3D G3DSA:3.10.450.50 58 184 2.4E-29 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS16065 057147f20398a9f31c85151a478cf615 437 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 11 303 22.747 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial JE55_RS16065 057147f20398a9f31c85151a478cf615 437 PANTHER PTHR30213 6 412 4.6E-91 T 22-04-2016 JE55_RS16065 057147f20398a9f31c85151a478cf615 437 Pfam PF03631 Virulence factor BrkB 24 273 1.6E-58 T 22-04-2016 IPR017039 Virulence factor BrkB JE55_RS16065 057147f20398a9f31c85151a478cf615 437 Gene3D G3DSA:1.10.10.10 294 344 3.4E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16065 057147f20398a9f31c85151a478cf615 437 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 272 3.2E-68 T 22-04-2016 IPR017039 Virulence factor BrkB JE55_RS16065 057147f20398a9f31c85151a478cf615 437 PANTHER PTHR30213:SF0 6 412 4.6E-91 T 22-04-2016 JE55_RS20395 fb243538da83053428ade5ff86a570aa 60 PANTHER PTHR23515:SF6 13 60 4.1E-15 T 22-04-2016 JE55_RS20395 fb243538da83053428ade5ff86a570aa 60 PANTHER PTHR23515 13 60 4.1E-15 T 22-04-2016 JE55_RS01315 141189104e3baabd462fcec53abc7e02 269 PANTHER PTHR20858 3 269 3.5E-113 T 22-04-2016 JE55_RS01315 141189104e3baabd462fcec53abc7e02 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 8 265 1.7E-96 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 JE55_RS01315 141189104e3baabd462fcec53abc7e02 269 PANTHER PTHR20858:SF17 3 269 3.5E-113 T 22-04-2016 JE55_RS01315 141189104e3baabd462fcec53abc7e02 269 Pfam PF08543 Phosphomethylpyrimidine kinase 15 263 7.1E-92 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 JE55_RS01315 141189104e3baabd462fcec53abc7e02 269 Gene3D G3DSA:3.40.1190.20 6 265 2.4E-98 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS01315 141189104e3baabd462fcec53abc7e02 269 SUPERFAMILY SSF53613 5 269 8.89E-78 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS12855 b98106cfa45c86c2950d0f1785e34e14 148 SUPERFAMILY SSF51283 12 147 4.58E-51 T 22-04-2016 IPR029054 dUTPase-like JE55_RS12855 b98106cfa45c86c2950d0f1785e34e14 148 PANTHER PTHR11241 4 148 1.7E-50 T 22-04-2016 JE55_RS12855 b98106cfa45c86c2950d0f1785e34e14 148 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 5 147 33.641 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 JE55_RS12855 b98106cfa45c86c2950d0f1785e34e14 148 TIGRFAM TIGR00576 dut: dUTP diphosphatase 9 147 1.0E-47 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 JE55_RS12855 b98106cfa45c86c2950d0f1785e34e14 148 Gene3D G3DSA:2.70.40.10 5 147 8.3E-52 T 22-04-2016 IPR029054 dUTPase-like JE55_RS12855 b98106cfa45c86c2950d0f1785e34e14 148 Pfam PF00692 dUTPase 16 146 1.4E-37 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 JE55_RS10090 57cc3bfd874c18f6525cf9541d81f068 297 Gene3D G3DSA:3.40.50.1820 5 291 4.4E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS10090 57cc3bfd874c18f6525cf9541d81f068 297 PRINTS PR00412 Epoxide hydrolase signature 101 114 5.3E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS10090 57cc3bfd874c18f6525cf9541d81f068 297 PRINTS PR00412 Epoxide hydrolase signature 268 290 5.3E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS10090 57cc3bfd874c18f6525cf9541d81f068 297 PRINTS PR00412 Epoxide hydrolase signature 33 51 5.3E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS10090 57cc3bfd874c18f6525cf9541d81f068 297 PRINTS PR00412 Epoxide hydrolase signature 115 128 5.3E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS10090 57cc3bfd874c18f6525cf9541d81f068 297 PANTHER PTHR10992 4 293 6.0E-62 T 22-04-2016 JE55_RS10090 57cc3bfd874c18f6525cf9541d81f068 297 Pfam PF00561 alpha/beta hydrolase fold 27 152 7.5E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS10090 57cc3bfd874c18f6525cf9541d81f068 297 SUPERFAMILY SSF53474 5 292 5.19E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS10090 57cc3bfd874c18f6525cf9541d81f068 297 PANTHER PTHR10992:SF778 4 293 6.0E-62 T 22-04-2016 JE55_RS04860 860099de695c5dc46ca771ebd055b5fd 249 Pfam PF13525 Outer membrane lipoprotein 128 249 1.1E-13 T 22-04-2016 JE55_RS04860 860099de695c5dc46ca771ebd055b5fd 249 Pfam PF16331 TolA binding protein trimerisation 53 116 1.2E-15 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 JE55_RS04860 860099de695c5dc46ca771ebd055b5fd 249 PANTHER PTHR26312:SF74 139 245 7.2E-18 T 22-04-2016 JE55_RS04860 860099de695c5dc46ca771ebd055b5fd 249 SUPERFAMILY SSF48452 132 235 3.57E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS04860 860099de695c5dc46ca771ebd055b5fd 249 Gene3D G3DSA:1.25.40.10 132 235 7.0E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS04860 860099de695c5dc46ca771ebd055b5fd 249 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 128 245 1.7E-37 T 22-04-2016 IPR014162 Tol-Pal system, YbgF JE55_RS04860 860099de695c5dc46ca771ebd055b5fd 249 PANTHER PTHR26312 139 245 7.2E-18 T 22-04-2016 JE55_RS18210 967343320a03dea3f3de8180a031e221 396 PANTHER PTHR32332:SF18 7 53 1.3E-71 T 22-04-2016 JE55_RS18210 967343320a03dea3f3de8180a031e221 396 PANTHER PTHR32332:SF18 76 380 1.3E-71 T 22-04-2016 JE55_RS18210 967343320a03dea3f3de8180a031e221 396 Gene3D G3DSA:3.20.20.70 18 307 6.1E-36 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS18210 967343320a03dea3f3de8180a031e221 396 SUPERFAMILY SSF51412 18 303 4.12E-35 T 22-04-2016 JE55_RS18210 967343320a03dea3f3de8180a031e221 396 PANTHER PTHR32332 7 53 1.3E-71 T 22-04-2016 JE55_RS18210 967343320a03dea3f3de8180a031e221 396 PANTHER PTHR32332 76 380 1.3E-71 T 22-04-2016 JE55_RS18210 967343320a03dea3f3de8180a031e221 396 Pfam PF03060 Nitronate monooxygenase 19 298 3.1E-34 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JE55_RS11525 42091a69d454abcd8af781375ae0b56f 128 Gene3D G3DSA:3.30.1330.40 10 124 5.1E-33 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS11525 42091a69d454abcd8af781375ae0b56f 128 Pfam PF01042 Endoribonuclease L-PSP 17 123 2.7E-26 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family JE55_RS11525 42091a69d454abcd8af781375ae0b56f 128 PANTHER PTHR11803 18 123 6.8E-36 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family JE55_RS11525 42091a69d454abcd8af781375ae0b56f 128 SUPERFAMILY SSF55298 15 124 9.11E-35 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS08560 c94c51caabc411824d89025cadcfe169 297 SUPERFAMILY SSF56534 9 291 7.85E-104 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 JE55_RS08560 c94c51caabc411824d89025cadcfe169 297 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 87 109 2.8E-10 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 JE55_RS08560 c94c51caabc411824d89025cadcfe169 297 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 228 247 2.8E-10 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 JE55_RS08560 c94c51caabc411824d89025cadcfe169 297 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 196 214 2.8E-10 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 JE55_RS08560 c94c51caabc411824d89025cadcfe169 297 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 130 141 - T 22-04-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 JE55_RS08560 c94c51caabc411824d89025cadcfe169 297 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 22 271 8.2E-111 T 22-04-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158|UniPathway: UPA00139 JE55_RS08560 c94c51caabc411824d89025cadcfe169 297 Gene3D G3DSA:1.10.800.10 13 289 5.3E-97 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 JE55_RS08560 c94c51caabc411824d89025cadcfe169 297 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 28 249 1.6E-44 T 22-04-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 JE55_RS08560 c94c51caabc411824d89025cadcfe169 297 PANTHER PTHR11473 28 247 4.1E-74 T 22-04-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 JE55_RS04135 c1cba179049956ae2b88e6f5924af343 397 PANTHER PTHR11751:SF401 23 393 6.8E-139 T 22-04-2016 JE55_RS04135 c1cba179049956ae2b88e6f5924af343 397 Gene3D G3DSA:3.40.640.10 53 276 8.3E-70 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS04135 c1cba179049956ae2b88e6f5924af343 397 SUPERFAMILY SSF53383 10 396 6.8E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS04135 c1cba179049956ae2b88e6f5924af343 397 Gene3D G3DSA:3.90.1150.10 277 395 7.3E-28 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS04135 c1cba179049956ae2b88e6f5924af343 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 JE55_RS04135 c1cba179049956ae2b88e6f5924af343 397 PANTHER PTHR11751 23 393 6.8E-139 T 22-04-2016 JE55_RS04135 c1cba179049956ae2b88e6f5924af343 397 Pfam PF00155 Aminotransferase class I and II 39 391 1.3E-53 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS16980 f7f40374625eb2051b08e648b84fdd3c 586 Gene3D G3DSA:1.20.1560.10 24 324 2.8E-20 T 22-04-2016 JE55_RS16980 f7f40374625eb2051b08e648b84fdd3c 586 SUPERFAMILY SSF90123 24 313 4.32E-26 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS16980 f7f40374625eb2051b08e648b84fdd3c 586 PANTHER PTHR24221:SF161 12 586 2.8E-67 T 22-04-2016 JE55_RS16980 f7f40374625eb2051b08e648b84fdd3c 586 SUPERFAMILY SSF52540 351 578 2.07E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16980 f7f40374625eb2051b08e648b84fdd3c 586 Pfam PF00005 ABC transporter 361 507 3.1E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS16980 f7f40374625eb2051b08e648b84fdd3c 586 Gene3D G3DSA:3.40.50.300 346 581 1.9E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16980 f7f40374625eb2051b08e648b84fdd3c 586 SMART SM00382 369 554 9.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS16980 f7f40374625eb2051b08e648b84fdd3c 586 PANTHER PTHR24221 12 586 2.8E-67 T 22-04-2016 JE55_RS12355 aada8a4195c4d42de0acbb9eebce94be 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JE55_RS12355 aada8a4195c4d42de0acbb9eebce94be 211 SUPERFAMILY SSF46689 2 84 5.64E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS12355 aada8a4195c4d42de0acbb9eebce94be 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.2E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS12355 aada8a4195c4d42de0acbb9eebce94be 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.2E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS12355 aada8a4195c4d42de0acbb9eebce94be 211 PANTHER PTHR30328 1 210 3.1E-39 T 22-04-2016 JE55_RS12355 aada8a4195c4d42de0acbb9eebce94be 211 SUPERFAMILY SSF48498 83 203 4.71E-16 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS12355 aada8a4195c4d42de0acbb9eebce94be 211 Gene3D G3DSA:1.10.357.10 62 207 2.7E-23 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS12355 aada8a4195c4d42de0acbb9eebce94be 211 Gene3D G3DSA:1.10.10.60 2 61 1.0E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS12355 aada8a4195c4d42de0acbb9eebce94be 211 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 83 202 1.9E-27 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 JE55_RS12355 aada8a4195c4d42de0acbb9eebce94be 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 6.8E-19 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS12355 aada8a4195c4d42de0acbb9eebce94be 211 PANTHER PTHR30328:SF26 1 210 3.1E-39 T 22-04-2016 JE55_RS00520 b4bd614d768cd1df71cfdbe2e6be32a0 392 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 25 56 1.4E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS00520 b4bd614d768cd1df71cfdbe2e6be32a0 392 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 278 353 1.6E-18 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS00520 b4bd614d768cd1df71cfdbe2e6be32a0 392 PIRSF PIRSF029347 3 392 4.8E-157 T 22-04-2016 IPR014555 RecF-like JE55_RS00520 b4bd614d768cd1df71cfdbe2e6be32a0 392 PANTHER PTHR32182:SF13 4 377 2.1E-90 T 22-04-2016 JE55_RS00520 b4bd614d768cd1df71cfdbe2e6be32a0 392 SUPERFAMILY SSF52540 223 356 2.82E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00520 b4bd614d768cd1df71cfdbe2e6be32a0 392 SUPERFAMILY SSF52540 3 112 2.82E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00520 b4bd614d768cd1df71cfdbe2e6be32a0 392 Gene3D G3DSA:3.40.50.300 254 362 3.4E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00520 b4bd614d768cd1df71cfdbe2e6be32a0 392 Gene3D G3DSA:3.40.50.300 5 53 4.4E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00520 b4bd614d768cd1df71cfdbe2e6be32a0 392 PANTHER PTHR32182 4 377 2.1E-90 T 22-04-2016 JE55_RS12000 1a049a707c57b6c37e6eeb7b6adada18 1039 SUPERFAMILY SSF53955 152 309 5.62E-10 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS12000 1a049a707c57b6c37e6eeb7b6adada18 1039 Gene3D G3DSA:3.40.710.10 393 517 1.7E-46 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12000 1a049a707c57b6c37e6eeb7b6adada18 1039 Gene3D G3DSA:3.40.710.10 833 1015 1.7E-46 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12000 1a049a707c57b6c37e6eeb7b6adada18 1039 Gene3D G3DSA:3.40.710.10 564 642 1.7E-46 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12000 1a049a707c57b6c37e6eeb7b6adada18 1039 Gene3D G3DSA:1.10.3810.10 153 302 6.2E-7 T 22-04-2016 JE55_RS12000 1a049a707c57b6c37e6eeb7b6adada18 1039 SUPERFAMILY SSF56601 564 628 7.13E-6 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12000 1a049a707c57b6c37e6eeb7b6adada18 1039 SUPERFAMILY SSF56601 736 1007 6.44E-24 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12000 1a049a707c57b6c37e6eeb7b6adada18 1039 Pfam PF00912 Transglycosylase 150 337 3.1E-25 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 JE55_RS05295 c733581d3c7ee32accd31a14112fd86b 307 PANTHER PTHR24220 5 264 2.5E-96 T 22-04-2016 JE55_RS05295 c733581d3c7ee32accd31a14112fd86b 307 SUPERFAMILY SSF52540 4 240 7.93E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05295 c733581d3c7ee32accd31a14112fd86b 307 SMART SM00382 29 228 1.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS05295 c733581d3c7ee32accd31a14112fd86b 307 Gene3D G3DSA:3.40.50.300 3 243 8.7E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05295 c733581d3c7ee32accd31a14112fd86b 307 Gene3D G3DSA:3.40.50.300 244 284 2.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05295 c733581d3c7ee32accd31a14112fd86b 307 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS05295 c733581d3c7ee32accd31a14112fd86b 307 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 249 3.4E-87 T 22-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 JE55_RS05295 c733581d3c7ee32accd31a14112fd86b 307 Pfam PF00005 ABC transporter 20 180 8.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS05295 c733581d3c7ee32accd31a14112fd86b 307 PANTHER PTHR24220:SF408 5 264 2.5E-96 T 22-04-2016 JE55_RS18205 60aa909c2473e1f849309f7b89dd438f 214 SUPERFAMILY SSF56925 39 214 1.65E-25 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS18205 60aa909c2473e1f849309f7b89dd438f 214 PANTHER PTHR36920:SF1 2 214 2.1E-48 T 22-04-2016 JE55_RS18205 60aa909c2473e1f849309f7b89dd438f 214 Pfam PF03922 OmpW family 36 214 2.5E-45 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 JE55_RS18205 60aa909c2473e1f849309f7b89dd438f 214 Gene3D G3DSA:2.40.160.20 37 214 9.6E-49 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS18205 60aa909c2473e1f849309f7b89dd438f 214 PANTHER PTHR36920 2 214 2.1E-48 T 22-04-2016 JE55_RS00965 03ae5572cca32a5c8f745587fe16449b 117 Pfam PF00576 HIUase/Transthyretin family 4 116 1.6E-34 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily JE55_RS00965 03ae5572cca32a5c8f745587fe16449b 117 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 117 2.5E-39 T 22-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 JE55_RS00965 03ae5572cca32a5c8f745587fe16449b 117 PANTHER PTHR10395:SF7 1 117 2.2E-43 T 22-04-2016 JE55_RS00965 03ae5572cca32a5c8f745587fe16449b 117 ProSitePatterns PS00769 Transthyretin signature 2. 100 112 - T 22-04-2016 IPR023419 Transthyretin, conserved site JE55_RS00965 03ae5572cca32a5c8f745587fe16449b 117 SUPERFAMILY SSF49472 1 117 5.62E-42 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily JE55_RS00965 03ae5572cca32a5c8f745587fe16449b 117 Gene3D G3DSA:2.60.40.180 2 117 7.3E-37 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily JE55_RS00965 03ae5572cca32a5c8f745587fe16449b 117 PRINTS PR00189 Transthyretin signature 3 23 3.3E-6 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase JE55_RS00965 03ae5572cca32a5c8f745587fe16449b 117 PRINTS PR00189 Transthyretin signature 95 117 3.3E-6 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase JE55_RS00965 03ae5572cca32a5c8f745587fe16449b 117 PANTHER PTHR10395 1 117 2.2E-43 T 22-04-2016 JE55_RS18185 a2dd05cfcb608507c88cb11332bb6ee3 386 PANTHER PTHR24220 30 320 4.2E-160 T 22-04-2016 JE55_RS18185 a2dd05cfcb608507c88cb11332bb6ee3 386 SUPERFAMILY SSF52540 29 266 1.56E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18185 a2dd05cfcb608507c88cb11332bb6ee3 386 Pfam PF08402 TOBE domain 304 384 3.5E-16 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 JE55_RS18185 a2dd05cfcb608507c88cb11332bb6ee3 386 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 59 384 1.4E-125 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 JE55_RS18185 a2dd05cfcb608507c88cb11332bb6ee3 386 SMART SM00382 53 244 1.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS18185 a2dd05cfcb608507c88cb11332bb6ee3 386 Gene3D G3DSA:3.40.50.300 24 261 5.7E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18185 a2dd05cfcb608507c88cb11332bb6ee3 386 SUPERFAMILY SSF50331 262 384 9.07E-18 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS18185 a2dd05cfcb608507c88cb11332bb6ee3 386 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS18185 a2dd05cfcb608507c88cb11332bb6ee3 386 Pfam PF00005 ABC transporter 45 186 1.1E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS18185 a2dd05cfcb608507c88cb11332bb6ee3 386 PANTHER PTHR24220:SF481 30 320 4.2E-160 T 22-04-2016 JE55_RS09050 bea6dbe1350be3d5a44378888163967d 198 Pfam PF00239 Resolvase, N terminal domain 5 144 8.9E-37 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JE55_RS09050 bea6dbe1350be3d5a44378888163967d 198 SMART SM00857 4 145 7.9E-49 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JE55_RS09050 bea6dbe1350be3d5a44378888163967d 198 ProSitePatterns PS00398 Site-specific recombinases signature 2. 63 75 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 JE55_RS09050 bea6dbe1350be3d5a44378888163967d 198 SUPERFAMILY SSF53041 3 144 3.27E-38 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JE55_RS09050 bea6dbe1350be3d5a44378888163967d 198 PANTHER PTHR30461 3 191 2.4E-43 T 22-04-2016 JE55_RS09050 bea6dbe1350be3d5a44378888163967d 198 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 22-04-2016 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 JE55_RS09050 bea6dbe1350be3d5a44378888163967d 198 Gene3D G3DSA:3.40.50.1390 3 127 2.1E-34 T 22-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 JE55_RS09050 bea6dbe1350be3d5a44378888163967d 198 Gene3D G3DSA:1.10.10.60 147 186 3.6E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 PANTHER PTHR11638:SF122 1 145 0.0 T 22-04-2016 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 PANTHER PTHR11638:SF122 169 877 0.0 T 22-04-2016 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 SUPERFAMILY SSF52540 568 872 2.34E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 Gene3D G3DSA:3.40.50.300 189 371 6.9E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 Gene3D G3DSA:1.10.8.60 805 876 7.5E-9 T 22-04-2016 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 PANTHER PTHR11638 1 145 0.0 T 22-04-2016 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 PANTHER PTHR11638 169 877 0.0 T 22-04-2016 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 794 868 2.5E-11 T 22-04-2016 IPR019489 Clp ATPase, C-terminal JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 SUPERFAMILY SSF52540 188 517 6.6E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 Gene3D G3DSA:1.10.8.60 375 456 4.6E-27 T 22-04-2016 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 232 344 1.7E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 Gene3D G3DSA:3.40.50.300 574 743 8.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 Gene3D G3DSA:3.40.50.300 775 804 8.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 SUPERFAMILY SSF81923 11 128 4.05E-20 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 29 74 9.5E-11 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 SMART SM00382 227 372 2.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 SMART SM00382 619 779 7.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 Pfam PF07724 AAA domain (Cdc48 subfamily) 619 788 2.3E-42 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 876 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 Gene3D G3DSA:1.10.1780.10 11 153 2.4E-22 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 623 641 2.1E-34 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 697 715 2.1E-34 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 730 744 2.1E-34 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 668 686 2.1E-34 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 SMART SM01086 793 886 3.3E-9 T 22-04-2016 IPR019489 Clp ATPase, C-terminal JE55_RS06750 75809c3c8ad940fce8a88b7f356a58e6 889 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 323 335 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 JE55_RS05740 cc4ef309f5fa8cd997ac85d53d889531 208 Pfam PF01081 KDPG and KHG aldolase 5 199 2.0E-66 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JE55_RS05740 cc4ef309f5fa8cd997ac85d53d889531 208 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 203 1.5E-72 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JE55_RS05740 cc4ef309f5fa8cd997ac85d53d889531 208 Gene3D G3DSA:3.20.20.70 2 206 1.4E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS05740 cc4ef309f5fa8cd997ac85d53d889531 208 SUPERFAMILY SSF51569 5 205 2.01E-63 T 22-04-2016 JE55_RS05740 cc4ef309f5fa8cd997ac85d53d889531 208 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 JE55_RS05740 cc4ef309f5fa8cd997ac85d53d889531 208 PANTHER PTHR30246:SF0 4 203 1.8E-84 T 22-04-2016 JE55_RS05740 cc4ef309f5fa8cd997ac85d53d889531 208 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JE55_RS05740 cc4ef309f5fa8cd997ac85d53d889531 208 PANTHER PTHR30246 4 203 1.8E-84 T 22-04-2016 JE55_RS05580 04e2f37eb67ae17288255d8656ce5653 380 Gene3D G3DSA:3.90.1530.10 155 244 8.0E-36 T 22-04-2016 JE55_RS05580 04e2f37eb67ae17288255d8656ce5653 380 Gene3D G3DSA:3.90.1530.10 71 119 8.0E-36 T 22-04-2016 JE55_RS05580 04e2f37eb67ae17288255d8656ce5653 380 SUPERFAMILY SSF110849 74 119 2.04E-53 T 22-04-2016 IPR003115 ParB/Sulfiredoxin JE55_RS05580 04e2f37eb67ae17288255d8656ce5653 380 SUPERFAMILY SSF110849 155 324 2.04E-53 T 22-04-2016 IPR003115 ParB/Sulfiredoxin JE55_RS05580 04e2f37eb67ae17288255d8656ce5653 380 Pfam PF08857 Putative ParB-like nuclease 79 279 2.4E-52 T 22-04-2016 IPR014956 Putative ParB-like nuclease JE55_RS16655 a5bb3f5ce15c492133df960c6c337995 335 SMART SM00382 98 283 7.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS16655 a5bb3f5ce15c492133df960c6c337995 335 SUPERFAMILY SSF52540 74 290 6.69E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16655 a5bb3f5ce15c492133df960c6c337995 335 ProSitePatterns PS00211 ABC transporters family signature. 193 207 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS16655 a5bb3f5ce15c492133df960c6c337995 335 Pfam PF00005 ABC transporter 89 220 1.0E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS16655 a5bb3f5ce15c492133df960c6c337995 335 PANTHER PTHR24220:SF365 75 317 5.9E-112 T 22-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 JE55_RS16655 a5bb3f5ce15c492133df960c6c337995 335 PANTHER PTHR24220 75 317 5.9E-112 T 22-04-2016 JE55_RS16655 a5bb3f5ce15c492133df960c6c337995 335 Gene3D G3DSA:3.40.50.300 73 275 2.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01135 9eccaab0dac3a30a6edfc0ba215c42cd 262 PANTHER PTHR23416 1 254 1.2E-123 T 22-04-2016 JE55_RS01135 9eccaab0dac3a30a6edfc0ba215c42cd 262 PANTHER PTHR23416:SF8 1 254 1.2E-123 T 22-04-2016 JE55_RS01135 9eccaab0dac3a30a6edfc0ba215c42cd 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 31 66 1.5E-6 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS01135 9eccaab0dac3a30a6edfc0ba215c42cd 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 105 136 3.6E-8 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS01135 9eccaab0dac3a30a6edfc0ba215c42cd 262 SUPERFAMILY SSF51161 3 262 1.27E-78 T 22-04-2016 IPR011004 Trimeric LpxA-like JE55_RS01135 9eccaab0dac3a30a6edfc0ba215c42cd 262 Gene3D G3DSA:2.160.10.10 3 190 4.4E-53 T 22-04-2016 JE55_RS01135 9eccaab0dac3a30a6edfc0ba215c42cd 262 PIRSF PIRSF000456 1 262 2.4E-105 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 JE55_RS01135 9eccaab0dac3a30a6edfc0ba215c42cd 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 260 4.2E-104 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 JE55_RS01135 9eccaab0dac3a30a6edfc0ba215c42cd 262 Gene3D G3DSA:1.20.1180.10 193 262 1.3E-24 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 JE55_RS01135 9eccaab0dac3a30a6edfc0ba215c42cd 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 176 261 8.9E-29 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 JE55_RS01135 9eccaab0dac3a30a6edfc0ba215c42cd 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 262 47.027 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 JE55_RS11795 9656bdd56d2529520238d171c54403a9 510 SUPERFAMILY SSF56235 1 187 6.09E-46 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS11795 9656bdd56d2529520238d171c54403a9 510 Gene3D G3DSA:3.60.20.10 1 185 5.4E-50 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS11795 9656bdd56d2529520238d171c54403a9 510 Pfam PF00733 Asparagine synthase 358 449 2.2E-26 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 JE55_RS11795 9656bdd56d2529520238d171c54403a9 510 Pfam PF00733 Asparagine synthase 213 352 3.0E-35 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 JE55_RS11795 9656bdd56d2529520238d171c54403a9 510 PANTHER PTHR11772:SF2 2 452 2.4E-102 T 22-04-2016 JE55_RS11795 9656bdd56d2529520238d171c54403a9 510 Pfam PF13537 Glutamine amidotransferase domain 52 169 1.5E-38 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain JE55_RS11795 9656bdd56d2529520238d171c54403a9 510 Gene3D G3DSA:3.40.50.620 199 455 1.1E-70 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS11795 9656bdd56d2529520238d171c54403a9 510 PANTHER PTHR11772 2 452 2.4E-102 T 22-04-2016 JE55_RS11795 9656bdd56d2529520238d171c54403a9 510 SUPERFAMILY SSF52402 202 452 1.01E-65 T 22-04-2016 JE55_RS04570 4fe8c471ec447c2335a3c7b9b43112e5 480 Gene3D G3DSA:1.20.1250.20 9 197 1.3E-30 T 22-04-2016 JE55_RS04570 4fe8c471ec447c2335a3c7b9b43112e5 480 SUPERFAMILY SSF103473 6 197 1.31E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS04570 4fe8c471ec447c2335a3c7b9b43112e5 480 SUPERFAMILY SSF103473 249 466 1.31E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS04570 4fe8c471ec447c2335a3c7b9b43112e5 480 Pfam PF07690 Major Facilitator Superfamily 17 412 5.9E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS04570 4fe8c471ec447c2335a3c7b9b43112e5 480 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 424 7.1E-72 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 JE55_RS04570 4fe8c471ec447c2335a3c7b9b43112e5 480 Gene3D G3DSA:1.20.1250.20 266 466 5.6E-16 T 22-04-2016 JE55_RS04570 4fe8c471ec447c2335a3c7b9b43112e5 480 PANTHER PTHR23501 4 474 1.1E-131 T 22-04-2016 JE55_RS04570 4fe8c471ec447c2335a3c7b9b43112e5 480 PANTHER PTHR23501:SF76 4 474 1.1E-131 T 22-04-2016 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 Pfam PF00384 Molybdopterin oxidoreductase 66 486 8.5E-48 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 PANTHER PTHR11615:SF110 560 777 3.7E-184 T 22-04-2016 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 PANTHER PTHR11615:SF110 1 515 3.7E-184 T 22-04-2016 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 SMART SM00926 9 64 2.1E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 SUPERFAMILY SSF50692 635 766 1.22E-27 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 Gene3D G3DSA:2.20.25.90 10 67 6.2E-18 T 22-04-2016 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 SUPERFAMILY SSF53706 12 488 7.2E-124 T 22-04-2016 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 Gene3D G3DSA:2.40.40.20 633 762 1.3E-21 T 22-04-2016 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 9 61 1.8E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 PANTHER PTHR11615 560 777 3.7E-184 T 22-04-2016 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 PANTHER PTHR11615 1 515 3.7E-184 T 22-04-2016 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 Pfam PF01568 Molydopterin dinucleotide binding domain 642 755 2.8E-21 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 Gene3D G3DSA:3.40.228.10 153 392 4.5E-53 T 22-04-2016 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 Gene3D G3DSA:3.40.50.740 68 146 3.2E-38 T 22-04-2016 JE55_RS01480 cda363dd776ea282813d3a17aa0ca122 777 Gene3D G3DSA:3.40.50.740 393 488 3.2E-38 T 22-04-2016 JE55_RS17115 2319f6357800fa746ab42047f48ff30d 535 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 161 4.1E-17 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS17115 2319f6357800fa746ab42047f48ff30d 535 Gene3D G3DSA:3.40.50.880 340 527 4.7E-21 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS17115 2319f6357800fa746ab42047f48ff30d 535 PANTHER PTHR21343:SF6 4 230 7.8E-109 T 22-04-2016 JE55_RS17115 2319f6357800fa746ab42047f48ff30d 535 PANTHER PTHR21343:SF6 343 531 7.8E-109 T 22-04-2016 JE55_RS17115 2319f6357800fa746ab42047f48ff30d 535 PANTHER PTHR21343 4 230 7.8E-109 T 22-04-2016 JE55_RS17115 2319f6357800fa746ab42047f48ff30d 535 PANTHER PTHR21343 343 531 7.8E-109 T 22-04-2016 JE55_RS17115 2319f6357800fa746ab42047f48ff30d 535 SUPERFAMILY SSF52540 5 191 3.32E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17115 2319f6357800fa746ab42047f48ff30d 535 Gene3D G3DSA:3.40.50.300 4 189 1.3E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17115 2319f6357800fa746ab42047f48ff30d 535 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 340 519 1.9E-30 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 JE55_RS17115 2319f6357800fa746ab42047f48ff30d 535 SUPERFAMILY SSF52317 339 530 3.0E-30 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS08530 46decb8c2aeec928c41807fa11500657 259 Pfam PF00005 ABC transporter 24 179 1.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS08530 46decb8c2aeec928c41807fa11500657 259 SUPERFAMILY SSF52540 6 248 3.41E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08530 46decb8c2aeec928c41807fa11500657 259 PANTHER PTHR24220 9 249 3.0E-119 T 22-04-2016 JE55_RS08530 46decb8c2aeec928c41807fa11500657 259 SMART SM00382 32 226 3.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS08530 46decb8c2aeec928c41807fa11500657 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 226 248 1.6E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JE55_RS08530 46decb8c2aeec928c41807fa11500657 259 Gene3D G3DSA:3.40.50.300 5 246 1.4E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08530 46decb8c2aeec928c41807fa11500657 259 PANTHER PTHR24220:SF400 9 249 3.0E-119 T 22-04-2016 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 586 650 3.0E-23 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 7 658 45.064 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 Pfam PF00204 DNA gyrase B 265 402 9.8E-33 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 Gene3D G3DSA:3.30.230.10 227 404 3.6E-38 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 Pfam PF01751 Toprim domain 430 544 1.1E-12 T 22-04-2016 IPR006171 Toprim domain JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 SMART SM00387 33 182 1.1E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR00418 DNA topoisomerase II family signature 71 84 4.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR00418 DNA topoisomerase II family signature 283 296 4.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR00418 DNA topoisomerase II family signature 431 445 4.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR00418 DNA topoisomerase II family signature 518 535 4.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR00418 DNA topoisomerase II family signature 500 516 4.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR00418 DNA topoisomerase II family signature 538 550 4.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR00418 DNA topoisomerase II family signature 590 606 4.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR00418 DNA topoisomerase II family signature 36 51 4.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR00418 DNA topoisomerase II family signature 117 131 4.8E-59 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 Gene3D G3DSA:3.30.565.10 20 224 6.6E-67 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 SUPERFAMILY SSF54211 228 404 3.41E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 SUPERFAMILY SSF56719 405 652 1.23E-75 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 SMART SM00433 38 654 2.2E-186 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR01098 Topoisomerase IV subunit B signature 201 222 1.9E-38 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR01098 Topoisomerase IV subunit B signature 328 343 1.9E-38 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR01098 Topoisomerase IV subunit B signature 183 200 1.9E-38 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR01098 Topoisomerase IV subunit B signature 379 404 1.9E-38 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR01098 Topoisomerase IV subunit B signature 311 327 1.9E-38 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR01098 Topoisomerase IV subunit B signature 465 486 1.9E-38 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR01098 Topoisomerase IV subunit B signature 31 44 1.9E-38 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PRINTS PR01098 Topoisomerase IV subunit B signature 355 378 1.9E-38 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 9 655 2.5E-219 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 SUPERFAMILY SSF55874 10 224 9.43E-58 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 39 179 5.8E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 Gene3D G3DSA:3.40.50.670 415 639 1.0E-76 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PANTHER PTHR10169 1 660 0.0 T 22-04-2016 JE55_RS13655 00488221c6714b2b0392a974f1f639ac 660 PANTHER PTHR10169:SF45 1 660 0.0 T 22-04-2016 JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 Pfam PF02355 Protein export membrane protein 428 598 1.6E-18 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 609 45.585 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 PANTHER PTHR30081 323 630 3.5E-173 T 22-04-2016 JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 PANTHER PTHR30081 1 182 3.5E-173 T 22-04-2016 JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 PANTHER PTHR30081 235 293 3.5E-173 T 22-04-2016 JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 Gene3D G3DSA:1.20.1640.10 405 606 1.7E-23 T 22-04-2016 JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 Pfam PF07549 SecD/SecF GG Motif 128 149 6.0E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 132 595 1.2E-133 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 SUPERFAMILY SSF82866 405 603 2.35E-39 T 22-04-2016 JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 355 588 5.1E-68 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 PANTHER PTHR30081:SF1 323 630 3.5E-173 T 22-04-2016 JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 PANTHER PTHR30081:SF1 1 182 3.5E-173 T 22-04-2016 JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 PANTHER PTHR30081:SF1 235 293 3.5E-173 T 22-04-2016 JE55_RS05405 eeeeb67155bd64a109d5d66d06be2431 675 Pfam PF13721 SecD export protein N-terminal TM region 1 112 9.5E-35 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain JE55_RS14115 bbe024f33e68ed8a391e509ac584f2a5 488 PANTHER PTHR30001 1 488 1.5E-195 T 22-04-2016 JE55_RS14115 bbe024f33e68ed8a391e509ac584f2a5 488 SMART SM00316 37 119 1.8E-5 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS14115 bbe024f33e68ed8a391e509ac584f2a5 488 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 5.2E-155 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 JE55_RS14115 bbe024f33e68ed8a391e509ac584f2a5 488 Gene3D G3DSA:2.40.50.140 31 125 7.0E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS14115 bbe024f33e68ed8a391e509ac584f2a5 488 SUPERFAMILY SSF50249 39 125 1.21E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS14115 bbe024f33e68ed8a391e509ac584f2a5 488 Pfam PF10150 Ribonuclease E/G family 121 392 2.7E-102 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 JE55_RS02445 5c53d3f01eccd91aaf333001df1b2a0f 562 Pfam PF01175 Urocanase 17 552 1.7E-260 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 JE55_RS02445 5c53d3f01eccd91aaf333001df1b2a0f 562 PIRSF PIRSF001423 1 562 1.1E-293 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 JE55_RS02445 5c53d3f01eccd91aaf333001df1b2a0f 562 PANTHER PTHR12216 10 560 0.0 T 22-04-2016 JE55_RS02445 5c53d3f01eccd91aaf333001df1b2a0f 562 PANTHER PTHR12216:SF3 10 560 0.0 T 22-04-2016 JE55_RS02445 5c53d3f01eccd91aaf333001df1b2a0f 562 Hamap MF_00577 Urocanate hydratase [hutU]. 2 561 49.879 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 JE55_RS02445 5c53d3f01eccd91aaf333001df1b2a0f 562 Gene3D G3DSA:3.40.1770.10 13 146 3.9E-160 T 22-04-2016 JE55_RS02445 5c53d3f01eccd91aaf333001df1b2a0f 562 Gene3D G3DSA:3.40.1770.10 365 560 3.9E-160 T 22-04-2016 JE55_RS02445 5c53d3f01eccd91aaf333001df1b2a0f 562 SUPERFAMILY SSF111326 10 560 8.24E-260 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 JE55_RS02445 5c53d3f01eccd91aaf333001df1b2a0f 562 ProSitePatterns PS01233 Urocanase signature. 447 462 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 JE55_RS02445 5c53d3f01eccd91aaf333001df1b2a0f 562 TIGRFAM TIGR01228 hutU: urocanate hydratase 16 559 2.2E-290 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 JE55_RS02445 5c53d3f01eccd91aaf333001df1b2a0f 562 Gene3D G3DSA:3.40.50.10730 147 354 6.2E-92 T 22-04-2016 JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 Gene3D G3DSA:3.40.50.300 1 214 4.9E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 SUPERFAMILY SSF52540 77 362 3.47E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 481 52.873 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 SUPERFAMILY SSF52540 24 104 8.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 PANTHER PTHR24031 1 476 5.6E-193 T 22-04-2016 JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 PANTHER PTHR24031:SF261 1 476 5.6E-193 T 22-04-2016 JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 SMART SM00490 260 341 2.4E-32 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 SMART SM00487 20 224 8.5E-60 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 Gene3D G3DSA:3.40.50.300 215 372 4.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 Pfam PF00270 DEAD/DEAH box helicase 25 197 5.1E-51 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JE55_RS11860 5083c8f9475a66f2cfd9c32b749250af 485 Pfam PF00271 Helicase conserved C-terminal domain 234 341 1.0E-26 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS00010 029ca2cd6822e6242c0e213948f48247 394 PANTHER PTHR11808:SF45 31 394 2.0E-123 T 22-04-2016 JE55_RS00010 029ca2cd6822e6242c0e213948f48247 394 Gene3D G3DSA:3.90.1150.10 262 392 5.4E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS00010 029ca2cd6822e6242c0e213948f48247 394 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 12 389 3.0E-86 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 JE55_RS00010 029ca2cd6822e6242c0e213948f48247 394 SUPERFAMILY SSF53383 30 390 7.43E-87 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS00010 029ca2cd6822e6242c0e213948f48247 394 PIRSF PIRSF001434 1 392 1.4E-109 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 JE55_RS00010 029ca2cd6822e6242c0e213948f48247 394 PANTHER PTHR11808 31 394 2.0E-123 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 JE55_RS00010 029ca2cd6822e6242c0e213948f48247 394 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 27 390 1.6E-119 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 JE55_RS00010 029ca2cd6822e6242c0e213948f48247 394 Gene3D G3DSA:3.40.640.10 10 258 3.3E-70 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS13895 a2259bbf0e5a25f274a2001789fb1e0e 299 PANTHER PTHR22778:SF21 6 256 1.7E-65 T 22-04-2016 JE55_RS13895 a2259bbf0e5a25f274a2001789fb1e0e 299 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 261 35.446 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 JE55_RS13895 a2259bbf0e5a25f274a2001789fb1e0e 299 SMART SM00450 118 223 4.8E-9 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS13895 a2259bbf0e5a25f274a2001789fb1e0e 299 SUPERFAMILY SSF52821 93 221 1.78E-23 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS13895 a2259bbf0e5a25f274a2001789fb1e0e 299 PANTHER PTHR22778 6 256 1.7E-65 T 22-04-2016 JE55_RS13895 a2259bbf0e5a25f274a2001789fb1e0e 299 Gene3D G3DSA:3.40.250.10 108 233 5.7E-27 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS17385 4abcef7a3000f95eebb4ddf86f9b3d4e 330 Gene3D G3DSA:3.90.1150.10 232 326 8.5E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS17385 4abcef7a3000f95eebb4ddf86f9b3d4e 330 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 188 201 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 JE55_RS17385 4abcef7a3000f95eebb4ddf86f9b3d4e 330 Pfam PF00155 Aminotransferase class I and II 26 323 1.8E-29 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS17385 4abcef7a3000f95eebb4ddf86f9b3d4e 330 Gene3D G3DSA:3.40.640.10 25 231 7.8E-42 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS17385 4abcef7a3000f95eebb4ddf86f9b3d4e 330 SUPERFAMILY SSF53383 10 323 1.18E-56 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS17385 4abcef7a3000f95eebb4ddf86f9b3d4e 330 PANTHER PTHR11751:SF3 14 325 8.4E-42 T 22-04-2016 JE55_RS17385 4abcef7a3000f95eebb4ddf86f9b3d4e 330 PANTHER PTHR11751 14 325 8.4E-42 T 22-04-2016 JE55_RS11615 e718335679d336ae319ce623d10d754f 595 SUPERFAMILY SSF47203 288 466 2.58E-52 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS11615 e718335679d336ae319ce623d10d754f 595 PANTHER PTHR10909 3 477 1.9E-231 T 22-04-2016 JE55_RS11615 e718335679d336ae319ce623d10d754f 595 PANTHER PTHR10909:SF296 3 477 1.9E-231 T 22-04-2016 JE55_RS11615 e718335679d336ae319ce623d10d754f 595 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 35 1.4E-13 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria JE55_RS11615 e718335679d336ae319ce623d10d754f 595 Gene3D G3DSA:1.10.540.10 38 161 3.7E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS11615 e718335679d336ae319ce623d10d754f 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 40 159 9.4E-10 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS11615 e718335679d336ae319ce623d10d754f 595 SUPERFAMILY SSF56645 31 293 2.62E-60 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS11615 e718335679d336ae319ce623d10d754f 595 Gene3D G3DSA:2.40.110.10 162 269 3.1E-28 T 22-04-2016 JE55_RS11615 e718335679d336ae319ce623d10d754f 595 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 472 591 1.8E-32 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain JE55_RS11615 e718335679d336ae319ce623d10d754f 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 273 8.6E-18 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS11615 e718335679d336ae319ce623d10d754f 595 Gene3D G3DSA:1.20.140.10 270 466 2.8E-55 T 22-04-2016 JE55_RS11615 e718335679d336ae319ce623d10d754f 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 283 452 1.4E-21 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 24 321 3.6E-120 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 PIRSF PIRSF002936 15 321 6.3E-138 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 SUPERFAMILY SSF52402 21 228 1.3E-61 T 22-04-2016 JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 Gene3D G3DSA:3.40.50.620 21 229 2.6E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 Gene3D G3DSA:3.40.50.620 262 270 2.6E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 PANTHER PTHR23293 197 230 1.9E-66 T 22-04-2016 JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 PANTHER PTHR23293 20 177 1.9E-66 T 22-04-2016 JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 PANTHER PTHR23293 263 321 1.9E-66 T 22-04-2016 JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 PANTHER PTHR23293:SF6 197 230 1.9E-66 T 22-04-2016 JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 PANTHER PTHR23293:SF6 20 177 1.9E-66 T 22-04-2016 JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 PANTHER PTHR23293:SF6 263 321 1.9E-66 T 22-04-2016 JE55_RS13080 8a3a7b568b0821caedc82697d749d343 321 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 45 274 1.1E-42 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 JE55_RS09845 dc6e52d7bb5475572dce5fccc4ce86cf 114 Gene3D G3DSA:2.20.25.10 1 41 5.3E-18 T 22-04-2016 JE55_RS09845 dc6e52d7bb5475572dce5fccc4ce86cf 114 Gene3D G3DSA:2.30.30.40 46 114 6.4E-33 T 22-04-2016 JE55_RS09845 dc6e52d7bb5475572dce5fccc4ce86cf 114 SUPERFAMILY SSF57783 3 34 1.7E-11 T 22-04-2016 JE55_RS09845 dc6e52d7bb5475572dce5fccc4ce86cf 114 Pfam PF08274 PhnA Zinc-Ribbon 3 32 2.9E-13 T 22-04-2016 IPR013987 PhnA protein, N-terminal JE55_RS09845 dc6e52d7bb5475572dce5fccc4ce86cf 114 SUPERFAMILY SSF82057 43 114 1.65E-25 T 22-04-2016 JE55_RS09845 dc6e52d7bb5475572dce5fccc4ce86cf 114 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 113 1.2E-42 T 22-04-2016 IPR004624 PhnA protein JE55_RS09845 dc6e52d7bb5475572dce5fccc4ce86cf 114 PANTHER PTHR30305 2 114 1.7E-58 T 22-04-2016 JE55_RS09845 dc6e52d7bb5475572dce5fccc4ce86cf 114 Pfam PF03831 PhnA domain 48 114 2.7E-29 T 22-04-2016 IPR013988 PhnA protein, C-terminal JE55_RS16635 a5f524acc86ca7515c58f35434015f0e 380 SUPERFAMILY SSF52096 271 350 1.19E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS16635 a5f524acc86ca7515c58f35434015f0e 380 SUPERFAMILY SSF52096 12 199 1.19E-58 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS16635 a5f524acc86ca7515c58f35434015f0e 380 Pfam PF16113 Enoyl-CoA hydratase/isomerase 22 364 2.1E-115 T 22-04-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 JE55_RS16635 a5f524acc86ca7515c58f35434015f0e 380 PANTHER PTHR11941:SF53 1 199 1.5E-100 T 22-04-2016 JE55_RS16635 a5f524acc86ca7515c58f35434015f0e 380 PANTHER PTHR11941:SF53 266 347 1.5E-100 T 22-04-2016 JE55_RS16635 a5f524acc86ca7515c58f35434015f0e 380 Gene3D G3DSA:3.90.226.10 11 209 3.6E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS16635 a5f524acc86ca7515c58f35434015f0e 380 Gene3D G3DSA:1.10.12.10 291 337 8.5E-5 T 22-04-2016 IPR014748 Crontonase, C-terminal JE55_RS16635 a5f524acc86ca7515c58f35434015f0e 380 PANTHER PTHR11941 1 199 1.5E-100 T 22-04-2016 JE55_RS16635 a5f524acc86ca7515c58f35434015f0e 380 PANTHER PTHR11941 266 347 1.5E-100 T 22-04-2016 JE55_RS30145 a95a9fcc0ebb0dde850905ab4cda8650 71 Gene3D G3DSA:2.40.40.20 1 71 9.0E-30 T 22-04-2016 JE55_RS30145 a95a9fcc0ebb0dde850905ab4cda8650 71 PANTHER PTHR21012:SF0 1 71 2.2E-33 T 22-04-2016 JE55_RS30145 a95a9fcc0ebb0dde850905ab4cda8650 71 SUPERFAMILY SSF50692 2 71 1.11E-25 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain JE55_RS30145 a95a9fcc0ebb0dde850905ab4cda8650 71 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 71 43.331 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 JE55_RS30145 a95a9fcc0ebb0dde850905ab4cda8650 71 Pfam PF02261 Aspartate decarboxylase 2 71 4.5E-27 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 JE55_RS30145 a95a9fcc0ebb0dde850905ab4cda8650 71 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 1 71 9.0E-36 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 JE55_RS30145 a95a9fcc0ebb0dde850905ab4cda8650 71 PANTHER PTHR21012 1 71 2.2E-33 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 JE55_RS04640 1302f813b5aebe3e48bab9a90f377b5e 134 SUPERFAMILY SSF54427 5 132 2.04E-41 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS04640 1302f813b5aebe3e48bab9a90f377b5e 134 PIRSF PIRSF029394 1 134 2.4E-58 T 22-04-2016 IPR016918 Uncharacterised conserved protein UCP029394 JE55_RS04640 1302f813b5aebe3e48bab9a90f377b5e 134 Gene3D G3DSA:3.10.450.50 5 133 1.1E-49 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS04640 1302f813b5aebe3e48bab9a90f377b5e 134 Pfam PF13474 SnoaL-like domain 32 127 4.2E-5 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain JE55_RS08365 27902cc8dcadc0ddef2316472dce7b2c 515 Gene3D G3DSA:3.40.50.980 164 323 1.8E-36 T 22-04-2016 JE55_RS08365 27902cc8dcadc0ddef2316472dce7b2c 515 PANTHER PTHR24095 6 512 1.3E-148 T 22-04-2016 JE55_RS08365 27902cc8dcadc0ddef2316472dce7b2c 515 Gene3D G3DSA:2.30.38.10 330 401 4.9E-23 T 22-04-2016 JE55_RS08365 27902cc8dcadc0ddef2316472dce7b2c 515 Pfam PF00501 AMP-binding enzyme 7 407 4.5E-95 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS08365 27902cc8dcadc0ddef2316472dce7b2c 515 SUPERFAMILY SSF56801 2 512 1.44E-144 T 22-04-2016 JE55_RS08365 27902cc8dcadc0ddef2316472dce7b2c 515 ProSitePatterns PS00455 Putative AMP-binding domain signature. 157 168 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS08365 27902cc8dcadc0ddef2316472dce7b2c 515 Gene3D G3DSA:3.30.300.30 402 512 4.6E-32 T 22-04-2016 JE55_RS08365 27902cc8dcadc0ddef2316472dce7b2c 515 Gene3D G3DSA:3.40.50.980 3 163 8.1E-39 T 22-04-2016 JE55_RS08365 27902cc8dcadc0ddef2316472dce7b2c 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 416 503 2.3E-21 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS00410 03edeb1b55df840c6ceddebf1f0a876f 208 Pfam PF01865 Protein of unknown function DUF47 12 206 3.3E-28 T 22-04-2016 IPR018445 Putative phosphate transport regulator JE55_RS00410 03edeb1b55df840c6ceddebf1f0a876f 208 PANTHER PTHR37298 1 208 1.6E-54 T 22-04-2016 JE55_RS00410 03edeb1b55df840c6ceddebf1f0a876f 208 SUPERFAMILY SSF109755 44 201 8.24E-6 T 22-04-2016 JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 Pfam PF00005 ABC transporter 41 196 3.7E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 Pfam PF00005 ABC transporter 321 473 2.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 Gene3D G3DSA:3.40.50.300 23 274 4.5E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 Gene3D G3DSA:3.40.50.300 291 546 8.2E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 PANTHER PTHR24220 26 430 9.8E-161 T 22-04-2016 JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 PANTHER PTHR24220:SF574 26 430 9.8E-161 T 22-04-2016 JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 SUPERFAMILY SSF52540 314 544 8.52E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 524 548 3.6E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 252 278 1.0E-5 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 SUPERFAMILY SSF52540 16 278 2.54E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 SMART SM00382 49 250 2.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS01445 b3713baa5a8a45eda28a3f67e1411a0d 549 SMART SM00382 329 522 5.7E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS16385 18183f4247022121ed4f23bd0b82828b 136 PANTHER PTHR30007 6 86 5.4E-21 T 22-04-2016 JE55_RS16385 18183f4247022121ed4f23bd0b82828b 136 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 82 6.2E-24 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family JE55_RS16385 18183f4247022121ed4f23bd0b82828b 136 PANTHER PTHR30007:SF0 6 86 5.4E-21 T 22-04-2016 JE55_RS04755 682e55c0700956970b65e56ef1d83984 263 PANTHER PTHR30136 9 259 1.0E-71 T 22-04-2016 JE55_RS04755 682e55c0700956970b65e56ef1d83984 263 Gene3D G3DSA:1.10.10.10 12 87 3.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04755 682e55c0700956970b65e56ef1d83984 263 PANTHER PTHR30136:SF4 9 259 1.0E-71 T 22-04-2016 JE55_RS04755 682e55c0700956970b65e56ef1d83984 263 Pfam PF01614 Bacterial transcriptional regulator 136 259 7.2E-8 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal JE55_RS04755 682e55c0700956970b65e56ef1d83984 263 Gene3D G3DSA:3.30.450.40 88 260 4.6E-35 T 22-04-2016 IPR029016 GAF domain-like JE55_RS04755 682e55c0700956970b65e56ef1d83984 263 SUPERFAMILY SSF55781 84 260 2.75E-34 T 22-04-2016 IPR029016 GAF domain-like JE55_RS04755 682e55c0700956970b65e56ef1d83984 263 SUPERFAMILY SSF46785 19 89 2.95E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04755 682e55c0700956970b65e56ef1d83984 263 Pfam PF09339 IclR helix-turn-helix domain 19 70 3.7E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JE55_RS04755 682e55c0700956970b65e56ef1d83984 263 SMART SM00346 17 107 5.2E-21 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JE55_RS03100 1b1faac0e2502f4243df7fa80c0a9708 143 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 129 2.6E-20 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS03100 1b1faac0e2502f4243df7fa80c0a9708 143 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 103 1.1E-16 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS03100 1b1faac0e2502f4243df7fa80c0a9708 143 SUPERFAMILY SSF56214 3 129 2.62E-25 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS03100 1b1faac0e2502f4243df7fa80c0a9708 143 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 105 1.0E-50 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS03100 1b1faac0e2502f4243df7fa80c0a9708 143 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 130 24.116 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS03100 1b1faac0e2502f4243df7fa80c0a9708 143 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 130 5.5E-25 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS03100 1b1faac0e2502f4243df7fa80c0a9708 143 Gene3D G3DSA:3.90.470.20 1 129 8.4E-33 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS05205 46a6ad6d9cfcecf915af42868549de19 300 Gene3D G3DSA:2.60.200.30 150 262 9.7E-42 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 JE55_RS05205 46a6ad6d9cfcecf915af42868549de19 300 PANTHER PTHR20275 9 290 2.5E-88 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 JE55_RS05205 46a6ad6d9cfcecf915af42868549de19 300 SUPERFAMILY SSF111331 9 291 1.26E-86 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain JE55_RS05205 46a6ad6d9cfcecf915af42868549de19 300 Gene3D G3DSA:3.40.50.10330 6 149 1.5E-36 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 JE55_RS05205 46a6ad6d9cfcecf915af42868549de19 300 Pfam PF01513 ATP-NAD kinase 58 271 9.4E-53 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 JE55_RS05205 46a6ad6d9cfcecf915af42868549de19 300 Hamap MF_00361 NAD kinase [nadK]. 8 288 32.608 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 JE55_RS04140 d44f5e40c9f9d42b94a1f256954b8c6a 370 Pfam PF01464 Transglycosylase SLT domain 178 256 6.7E-16 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 JE55_RS04140 d44f5e40c9f9d42b94a1f256954b8c6a 370 PANTHER PTHR21666 155 268 9.8E-18 T 22-04-2016 JE55_RS04140 d44f5e40c9f9d42b94a1f256954b8c6a 370 Gene3D G3DSA:1.10.530.10 178 267 2.8E-20 T 22-04-2016 JE55_RS04140 d44f5e40c9f9d42b94a1f256954b8c6a 370 SUPERFAMILY SSF53955 165 265 6.57E-21 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS17160 d3da3371214244342dcf715a7197975a 204 SUPERFAMILY SSF53300 47 161 1.23E-16 T 22-04-2016 IPR002035 von Willebrand factor, type A JE55_RS17160 d3da3371214244342dcf715a7197975a 204 Gene3D G3DSA:3.40.50.410 47 162 6.0E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A JE55_RS17160 d3da3371214244342dcf715a7197975a 204 PANTHER PTHR35023 14 202 3.2E-18 T 22-04-2016 JE55_RS17160 d3da3371214244342dcf715a7197975a 204 PANTHER PTHR35023:SF1 14 202 3.2E-18 T 22-04-2016 JE55_RS17160 d3da3371214244342dcf715a7197975a 204 Pfam PF00092 von Willebrand factor type A domain 48 162 9.1E-7 T 22-04-2016 IPR002035 von Willebrand factor, type A JE55_RS00315 c9c5a8db2b73e75d5b8c0ec0fae4e610 180 Gene3D G3DSA:1.10.490.10 23 128 1.6E-20 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 JE55_RS00315 c9c5a8db2b73e75d5b8c0ec0fae4e610 180 SUPERFAMILY SSF46458 22 128 1.99E-24 T 22-04-2016 IPR009050 Globin-like JE55_RS11505 a6cd3e6bc94c8ba7e09d1e3d3b1a4868 193 Gene3D G3DSA:3.40.50.880 3 187 2.1E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS11505 a6cd3e6bc94c8ba7e09d1e3d3b1a4868 193 PANTHER PTHR11019 4 94 9.4E-53 T 22-04-2016 JE55_RS11505 a6cd3e6bc94c8ba7e09d1e3d3b1a4868 193 PANTHER PTHR11019 112 145 9.4E-53 T 22-04-2016 JE55_RS11505 a6cd3e6bc94c8ba7e09d1e3d3b1a4868 193 SUPERFAMILY SSF52317 4 188 2.44E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS11505 a6cd3e6bc94c8ba7e09d1e3d3b1a4868 193 PANTHER PTHR11019:SF112 4 94 9.4E-53 T 22-04-2016 JE55_RS11505 a6cd3e6bc94c8ba7e09d1e3d3b1a4868 193 PANTHER PTHR11019:SF112 112 145 9.4E-53 T 22-04-2016 JE55_RS11505 a6cd3e6bc94c8ba7e09d1e3d3b1a4868 193 Pfam PF01965 DJ-1/PfpI family 4 185 1.0E-49 T 22-04-2016 IPR002818 DJ-1/PfpI JE55_RS11505 a6cd3e6bc94c8ba7e09d1e3d3b1a4868 193 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 5 188 3.6E-64 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 JE55_RS09315 626369877d535ebdf5de948e76dc5a81 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 94 2.8E-15 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 JE55_RS09315 626369877d535ebdf5de948e76dc5a81 99 PANTHER PTHR15004:SF0 1 99 4.4E-22 T 22-04-2016 JE55_RS09315 626369877d535ebdf5de948e76dc5a81 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 99 7.7E-28 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 JE55_RS09315 626369877d535ebdf5de948e76dc5a81 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 99 20.493 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 JE55_RS09315 626369877d535ebdf5de948e76dc5a81 99 SUPERFAMILY SSF141000 3 97 1.96E-24 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 JE55_RS09315 626369877d535ebdf5de948e76dc5a81 99 PANTHER PTHR15004 1 99 4.4E-22 T 22-04-2016 JE55_RS02080 1ef7e828209c203df890eca7052c1712 284 Gene3D G3DSA:3.20.20.70 11 280 5.1E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS02080 1ef7e828209c203df890eca7052c1712 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 274 9.8E-118 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS02080 1ef7e828209c203df890eca7052c1712 284 PANTHER PTHR21057 5 284 1.7E-155 T 22-04-2016 JE55_RS02080 1ef7e828209c203df890eca7052c1712 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 276 51.258 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS02080 1ef7e828209c203df890eca7052c1712 284 PANTHER PTHR21057:SF2 5 284 1.7E-155 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS02080 1ef7e828209c203df890eca7052c1712 284 SUPERFAMILY SSF51569 2 277 2.84E-100 T 22-04-2016 JE55_RS02080 1ef7e828209c203df890eca7052c1712 284 Pfam PF00793 DAHP synthetase I family 8 274 4.1E-65 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS13845 8b9de5ad7852e5364cd2edbe0d106e4f 610 Gene3D G3DSA:1.50.10.10 216 592 3.6E-88 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 JE55_RS13845 8b9de5ad7852e5364cd2edbe0d106e4f 610 PANTHER PTHR31616:SF0 2 601 3.1E-187 T 22-04-2016 JE55_RS13845 8b9de5ad7852e5364cd2edbe0d106e4f 610 PANTHER PTHR31616 2 601 3.1E-187 T 22-04-2016 JE55_RS13845 8b9de5ad7852e5364cd2edbe0d106e4f 610 SUPERFAMILY SSF48208 194 590 2.31E-116 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 JE55_RS13845 8b9de5ad7852e5364cd2edbe0d106e4f 610 Pfam PF00723 Glycosyl hydrolases family 15 219 530 1.2E-63 T 22-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 JE55_RS12580 81e287836cc311a3f3e2cf3a3f2b66c7 214 SUPERFAMILY SSF50475 16 214 5.05E-71 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS12580 81e287836cc311a3f3e2cf3a3f2b66c7 214 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 171 214 9.5E-22 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 JE55_RS12580 81e287836cc311a3f3e2cf3a3f2b66c7 214 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 34 119 7.7E-29 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 JE55_RS12580 81e287836cc311a3f3e2cf3a3f2b66c7 214 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 214 5.8E-89 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 JE55_RS12580 81e287836cc311a3f3e2cf3a3f2b66c7 214 PANTHER PTHR10851:SF0 1 214 3.9E-115 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 JE55_RS12580 81e287836cc311a3f3e2cf3a3f2b66c7 214 Gene3D G3DSA:2.30.110.10 10 214 2.2E-90 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS12580 81e287836cc311a3f3e2cf3a3f2b66c7 214 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 10 214 41.411 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 JE55_RS12580 81e287836cc311a3f3e2cf3a3f2b66c7 214 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 181 194 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 JE55_RS12580 81e287836cc311a3f3e2cf3a3f2b66c7 214 PIRSF PIRSF000190 1 214 1.5E-84 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 JE55_RS12580 81e287836cc311a3f3e2cf3a3f2b66c7 214 PANTHER PTHR10851 1 214 3.9E-115 T 22-04-2016 JE55_RS07550 d2f0ae2a159fc35f6f844c6be4dd1084 199 PANTHER PTHR30055:SF57 2 197 1.7E-20 T 22-04-2016 JE55_RS07550 d2f0ae2a159fc35f6f844c6be4dd1084 199 SUPERFAMILY SSF46689 2 76 4.62E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS07550 d2f0ae2a159fc35f6f844c6be4dd1084 199 Gene3D G3DSA:1.10.10.60 2 62 8.1E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS07550 d2f0ae2a159fc35f6f844c6be4dd1084 199 Gene3D G3DSA:1.10.357.10 63 198 5.3E-43 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS07550 d2f0ae2a159fc35f6f844c6be4dd1084 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.3E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS07550 d2f0ae2a159fc35f6f844c6be4dd1084 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.3E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS07550 d2f0ae2a159fc35f6f844c6be4dd1084 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 3.1E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS07550 d2f0ae2a159fc35f6f844c6be4dd1084 199 PANTHER PTHR30055 2 197 1.7E-20 T 22-04-2016 JE55_RS07550 d2f0ae2a159fc35f6f844c6be4dd1084 199 SUPERFAMILY SSF48498 89 198 2.0E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS03795 495671bd9c95e109ac6cea81f6fc3bfa 165 SUPERFAMILY SSF52833 1 161 6.77E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS03795 495671bd9c95e109ac6cea81f6fc3bfa 165 Gene3D G3DSA:3.40.30.10 3 161 6.4E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS31650 8bed7416dd7da63e0f9f6b7a3f69ec9f 151 PANTHER PTHR11785 3 150 6.5E-83 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS31650 8bed7416dd7da63e0f9f6b7a3f69ec9f 151 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 JE55_RS31650 8bed7416dd7da63e0f9f6b7a3f69ec9f 151 PANTHER PTHR11785:SF352 3 150 6.5E-83 T 22-04-2016 JE55_RS31650 8bed7416dd7da63e0f9f6b7a3f69ec9f 151 Pfam PF00324 Amino acid permease 14 151 4.2E-39 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 PANTHER PTHR11958 7 418 3.5E-224 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 Pfam PF00375 Sodium:dicarboxylate symporter family 9 400 8.5E-107 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 PANTHER PTHR11958:SF47 7 418 3.5E-224 T 22-04-2016 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 PRINTS PR00173 Glutamate-aspartate symporter signature 73 98 7.1E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 7.1E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 PRINTS PR00173 Glutamate-aspartate symporter signature 2 22 7.1E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 7.1E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 7.1E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 7.1E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 PRINTS PR00173 Glutamate-aspartate symporter signature 43 63 7.1E-31 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 Gene3D G3DSA:1.10.3860.10 6 406 1.7E-108 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 SUPERFAMILY SSF118215 8 402 2.75E-112 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS05815 642625877dbdb8427e1f8d886a654b28 440 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 35 50 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS09275 b633c5d39c6d18770c7646f3011a3cb6 150 PANTHER PTHR12589 1 147 6.3E-27 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein JE55_RS09275 b633c5d39c6d18770c7646f3011a3cb6 150 SUPERFAMILY SSF55620 2 146 1.33E-37 T 22-04-2016 JE55_RS09275 b633c5d39c6d18770c7646f3011a3cb6 150 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 116 1.1E-27 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein JE55_RS09275 b633c5d39c6d18770c7646f3011a3cb6 150 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 146 4.0E-35 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein JE55_RS09275 b633c5d39c6d18770c7646f3011a3cb6 150 Gene3D G3DSA:3.30.479.10 2 146 1.1E-37 T 22-04-2016 JE55_RS09995 225866d2de92ec57cbce03f4694ca55f 127 PANTHER PTHR34399 20 126 6.3E-12 T 22-04-2016 JE55_RS09995 225866d2de92ec57cbce03f4694ca55f 127 Gene3D G3DSA:2.40.128.30 19 127 5.4E-29 T 22-04-2016 IPR005468 Avidin/streptavidin JE55_RS09995 225866d2de92ec57cbce03f4694ca55f 127 PANTHER PTHR34399:SF3 20 126 6.3E-12 T 22-04-2016 JE55_RS09995 225866d2de92ec57cbce03f4694ca55f 127 Pfam PF01382 Avidin family 21 124 9.8E-26 T 22-04-2016 IPR005468 Avidin/streptavidin JE55_RS09995 225866d2de92ec57cbce03f4694ca55f 127 SUPERFAMILY SSF50876 19 126 1.88E-29 T 22-04-2016 IPR005468 Avidin/streptavidin JE55_RS02595 a55ecffe1d31291036d4b47849ed4900 413 SUPERFAMILY SSF53383 11 410 5.98E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS02595 a55ecffe1d31291036d4b47849ed4900 413 PANTHER PTHR11601:SF17 4 413 4.1E-143 T 22-04-2016 JE55_RS02595 a55ecffe1d31291036d4b47849ed4900 413 Pfam PF00266 Aminotransferase class-V 29 401 6.1E-124 T 22-04-2016 IPR000192 Aminotransferase class V domain JE55_RS02595 a55ecffe1d31291036d4b47849ed4900 413 Gene3D G3DSA:3.40.640.10 39 292 3.0E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS02595 a55ecffe1d31291036d4b47849ed4900 413 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 225 244 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JE55_RS02595 a55ecffe1d31291036d4b47849ed4900 413 Gene3D G3DSA:3.90.1150.10 293 407 2.3E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS02595 a55ecffe1d31291036d4b47849ed4900 413 PANTHER PTHR11601 4 413 4.1E-143 T 22-04-2016 JE55_RS07365 b23131923a82eb9b360afe420ba5dd2f 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.7E-45 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 JE55_RS07365 b23131923a82eb9b360afe420ba5dd2f 91 SUPERFAMILY SSF54570 3 84 3.53E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 JE55_RS07365 b23131923a82eb9b360afe420ba5dd2f 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 JE55_RS07365 b23131923a82eb9b360afe420ba5dd2f 91 Pfam PF00203 Ribosomal protein S19 3 83 1.3E-37 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 JE55_RS07365 b23131923a82eb9b360afe420ba5dd2f 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 JE55_RS07365 b23131923a82eb9b360afe420ba5dd2f 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 JE55_RS07365 b23131923a82eb9b360afe420ba5dd2f 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 JE55_RS07365 b23131923a82eb9b360afe420ba5dd2f 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.811 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 JE55_RS07365 b23131923a82eb9b360afe420ba5dd2f 91 Gene3D G3DSA:3.30.860.10 1 90 7.2E-42 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 JE55_RS07365 b23131923a82eb9b360afe420ba5dd2f 91 PANTHER PTHR11880 1 91 6.5E-54 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 JE55_RS07365 b23131923a82eb9b360afe420ba5dd2f 91 PIRSF PIRSF002144 1 91 3.1E-33 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 JE55_RS06330 cc960e00d005a20ad0cc7ca531582012 614 SUPERFAMILY SSF56601 235 569 4.03E-85 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS06330 cc960e00d005a20ad0cc7ca531582012 614 Gene3D G3DSA:3.90.1310.10 142 241 4.7E-28 T 22-04-2016 JE55_RS06330 cc960e00d005a20ad0cc7ca531582012 614 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 558 8.0E-70 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 JE55_RS06330 cc960e00d005a20ad0cc7ca531582012 614 Gene3D G3DSA:3.40.710.10 242 563 1.8E-82 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS06330 cc960e00d005a20ad0cc7ca531582012 614 PANTHER PTHR30627 26 597 4.2E-194 T 22-04-2016 JE55_RS06330 cc960e00d005a20ad0cc7ca531582012 614 SUPERFAMILY SSF56519 67 234 8.76E-44 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JE55_RS06330 cc960e00d005a20ad0cc7ca531582012 614 Pfam PF03717 Penicillin-binding Protein dimerisation domain 71 219 2.5E-15 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JE55_RS06330 cc960e00d005a20ad0cc7ca531582012 614 PANTHER PTHR30627:SF1 26 597 4.2E-194 T 22-04-2016 JE55_RS03470 f8a387f83993c9fe977afd7e1e959fbb 229 Pfam PF05239 PRC-barrel domain 149 224 2.1E-9 T 22-04-2016 IPR027275 PRC-barrel domain JE55_RS03470 f8a387f83993c9fe977afd7e1e959fbb 229 PANTHER PTHR33692 41 228 1.7E-34 T 22-04-2016 JE55_RS03470 f8a387f83993c9fe977afd7e1e959fbb 229 Gene3D G3DSA:2.30.30.240 151 229 1.8E-23 T 22-04-2016 JE55_RS03470 f8a387f83993c9fe977afd7e1e959fbb 229 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 56 228 2.3E-34 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 JE55_RS03470 f8a387f83993c9fe977afd7e1e959fbb 229 SUPERFAMILY SSF50447 54 144 2.26E-13 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS03470 f8a387f83993c9fe977afd7e1e959fbb 229 Pfam PF01782 RimM N-terminal domain 57 140 1.8E-18 T 22-04-2016 IPR002676 RimM protein GO:0006364 JE55_RS03470 f8a387f83993c9fe977afd7e1e959fbb 229 SUPERFAMILY SSF50346 151 228 3.34E-16 T 22-04-2016 IPR011033 PRC-barrel-like JE55_RS03470 f8a387f83993c9fe977afd7e1e959fbb 229 Gene3D G3DSA:2.40.30.60 47 145 1.3E-30 T 22-04-2016 IPR002676 RimM protein GO:0006364 JE55_RS03470 f8a387f83993c9fe977afd7e1e959fbb 229 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 55 229 20.654 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 Hamap MF_00930 Transcription elongation factor GreB [greB]. 26 182 51.251 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 42 73 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 Pfam PF03449 Transcription elongation factor, N-terminal 29 99 1.8E-22 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 28 182 5.1E-65 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 SUPERFAMILY SSF46557 28 103 3.4E-25 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 PANTHER PTHR30437 29 187 9.3E-57 T 22-04-2016 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 145 161 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 107 181 2.9E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 PIRSF PIRSF006092 26 183 4.5E-40 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 PANTHER PTHR30437:SF6 29 187 9.3E-57 T 22-04-2016 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 Gene3D G3DSA:3.10.50.30 104 183 4.1E-25 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 Hamap MF_00105 Transcription elongation factor GreA [greA]. 27 180 25.012 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 SUPERFAMILY SSF54534 106 181 6.93E-19 T 22-04-2016 JE55_RS03845 45daa27a969d98cedc0c0a4c69f396af 187 Gene3D G3DSA:1.10.287.180 28 100 1.1E-21 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 JE55_RS06525 36c72878fabc55779389bc8c9f84d437 167 SUPERFAMILY SSF56770 11 156 4.84E-64 T 22-04-2016 JE55_RS06525 36c72878fabc55779389bc8c9f84d437 167 PANTHER PTHR11995:SF19 13 155 1.3E-110 T 22-04-2016 JE55_RS06525 36c72878fabc55779389bc8c9f84d437 167 Gene3D G3DSA:3.40.50.700 26 164 3.6E-34 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 JE55_RS06525 36c72878fabc55779389bc8c9f84d437 167 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 40 148 1.3E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 JE55_RS06525 36c72878fabc55779389bc8c9f84d437 167 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 13 154 3.0E-73 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 JE55_RS06525 36c72878fabc55779389bc8c9f84d437 167 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 120 136 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 JE55_RS06525 36c72878fabc55779389bc8c9f84d437 167 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 6 153 39.396 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 JE55_RS06525 36c72878fabc55779389bc8c9f84d437 167 PANTHER PTHR11995 13 155 1.3E-110 T 22-04-2016 JE55_RS03700 216ade13e6a63dd28825f29549f25db8 458 PANTHER PTHR11895:SF73 10 453 8.4E-110 T 22-04-2016 JE55_RS03700 216ade13e6a63dd28825f29549f25db8 458 Pfam PF01425 Amidase 27 444 9.4E-85 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS03700 216ade13e6a63dd28825f29549f25db8 458 Gene3D G3DSA:3.90.1300.10 10 455 1.1E-116 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS03700 216ade13e6a63dd28825f29549f25db8 458 PANTHER PTHR11895 10 453 8.4E-110 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS03700 216ade13e6a63dd28825f29549f25db8 458 ProSitePatterns PS00571 Amidases signature. 161 192 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS03700 216ade13e6a63dd28825f29549f25db8 458 SUPERFAMILY SSF75304 10 455 2.62E-111 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS00595 a1f3f3bdd4fcb19b5fb266968451b3df 104 Pfam PF07876 Stress responsive A/B Barrel Domain 2 98 4.0E-22 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel JE55_RS00595 a1f3f3bdd4fcb19b5fb266968451b3df 104 SMART SM00886 2 100 3.6E-38 T 22-04-2016 IPR013097 Stress responsive alpha-beta barrel JE55_RS00595 a1f3f3bdd4fcb19b5fb266968451b3df 104 PANTHER PTHR37832:SF1 1 104 1.4E-16 T 22-04-2016 JE55_RS00595 a1f3f3bdd4fcb19b5fb266968451b3df 104 PANTHER PTHR37832 1 104 1.4E-16 T 22-04-2016 JE55_RS00595 a1f3f3bdd4fcb19b5fb266968451b3df 104 Gene3D G3DSA:3.30.70.900 1 99 8.6E-36 T 22-04-2016 JE55_RS00595 a1f3f3bdd4fcb19b5fb266968451b3df 104 SUPERFAMILY SSF54909 1 102 1.22E-25 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS10190 862744894540fb0d87a1129094216920 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 2.0E-15 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS10190 862744894540fb0d87a1129094216920 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 2.0E-15 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS10190 862744894540fb0d87a1129094216920 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 2.0E-15 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS10190 862744894540fb0d87a1129094216920 300 PRINTS PR00146 Dihydrodipicolinate synthase signature 42 63 2.0E-15 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS10190 862744894540fb0d87a1129094216920 300 PANTHER PTHR12128 1 292 2.7E-74 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS10190 862744894540fb0d87a1129094216920 300 Pfam PF00701 Dihydrodipicolinate synthetase family 7 284 2.5E-60 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS10190 862744894540fb0d87a1129094216920 300 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 14 280 2.6E-65 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS10190 862744894540fb0d87a1129094216920 300 PIRSF PIRSF001365 2 300 1.7E-72 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS10190 862744894540fb0d87a1129094216920 300 Gene3D G3DSA:3.20.20.70 1 295 2.4E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS10190 862744894540fb0d87a1129094216920 300 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 291 42.378 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS10190 862744894540fb0d87a1129094216920 300 SUPERFAMILY SSF51569 1 292 7.12E-79 T 22-04-2016 JE55_RS10190 862744894540fb0d87a1129094216920 300 SMART SM01130 6 293 2.3E-92 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS10190 862744894540fb0d87a1129094216920 300 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 139 169 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS17585 65de5617ba8af618cd207fa960f82896 763 SMART SM00382 546 732 2.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS17585 65de5617ba8af618cd207fa960f82896 763 SUPERFAMILY SSF52540 510 745 1.17E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17585 65de5617ba8af618cd207fa960f82896 763 PANTHER PTHR24221:SF248 191 747 2.9E-133 T 22-04-2016 JE55_RS17585 65de5617ba8af618cd207fa960f82896 763 Gene3D G3DSA:1.20.1560.10 191 496 3.9E-40 T 22-04-2016 JE55_RS17585 65de5617ba8af618cd207fa960f82896 763 Pfam PF00005 ABC transporter 538 685 1.9E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS17585 65de5617ba8af618cd207fa960f82896 763 SUPERFAMILY SSF90123 186 499 5.76E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS17585 65de5617ba8af618cd207fa960f82896 763 Pfam PF00664 ABC transporter transmembrane region 205 465 2.3E-17 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS17585 65de5617ba8af618cd207fa960f82896 763 Gene3D G3DSA:3.40.50.300 517 745 1.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17585 65de5617ba8af618cd207fa960f82896 763 PANTHER PTHR24221 191 747 2.9E-133 T 22-04-2016 JE55_RS06615 d759786312a48b5151731d7a3d389573 102 PIRSF PIRSF005894 1 102 6.5E-51 T 22-04-2016 IPR014434 Monothiol glutaredoxin JE55_RS06615 d759786312a48b5151731d7a3d389573 102 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 3 101 3.7E-49 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related JE55_RS06615 d759786312a48b5151731d7a3d389573 102 PANTHER PTHR10293 1 100 2.1E-65 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related JE55_RS06615 d759786312a48b5151731d7a3d389573 102 Pfam PF00462 Glutaredoxin 16 81 2.5E-20 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JE55_RS06615 d759786312a48b5151731d7a3d389573 102 SUPERFAMILY SSF52833 1 100 3.74E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS06615 d759786312a48b5151731d7a3d389573 102 Gene3D G3DSA:3.40.30.10 6 100 2.6E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 SUPERFAMILY SSF82771 23 106 7.32E-22 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 PANTHER PTHR30562:SF1 12 290 3.2E-200 T 22-04-2016 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 PANTHER PTHR30562:SF1 366 372 3.2E-200 T 22-04-2016 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 PANTHER PTHR30562:SF1 413 575 3.2E-200 T 22-04-2016 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 PANTHER PTHR30562:SF1 600 746 3.2E-200 T 22-04-2016 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 Gene3D G3DSA:1.10.150.20 693 747 1.3E-20 T 22-04-2016 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 510 680 5.4E-46 T 22-04-2016 IPR001162 UvrC family homology region JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 Hamap MF_00203 UvrABC system protein C [uvrC]. 10 745 25.886 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 SMART SM00465 23 104 2.6E-19 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 SUPERFAMILY SSF47781 644 747 6.04E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 Pfam PF02151 UvrB/uvrC motif 211 242 6.6E-7 T 22-04-2016 IPR001943 UVR domain GO:0005515 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 Pfam PF14520 Helix-hairpin-helix domain 696 746 2.0E-6 T 22-04-2016 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 Gene3D G3DSA:3.40.1440.10 24 103 7.4E-8 T 22-04-2016 IPR027299 GIY-YIG domain JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 SMART SM00278 726 745 23.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 SMART SM00278 694 713 3.5 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 PANTHER PTHR30562 12 290 3.2E-200 T 22-04-2016 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 PANTHER PTHR30562 366 372 3.2E-200 T 22-04-2016 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 PANTHER PTHR30562 413 575 3.2E-200 T 22-04-2016 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 PANTHER PTHR30562 600 746 3.2E-200 T 22-04-2016 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 Pfam PF01541 GIY-YIG catalytic domain 25 99 1.5E-8 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 SUPERFAMILY SSF46600 196 248 5.23E-11 T 22-04-2016 IPR001943 UVR domain GO:0005515 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 17 289 5.9E-94 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 JE55_RS03075 bc3dcb02163d662e87195ce4aaa40126 747 Gene3D G3DSA:4.10.860.10 188 249 1.8E-15 T 22-04-2016 IPR001943 UVR domain GO:0005515 JE55_RS02480 64643719124d73c2903e2cbf29aafb09 206 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 171 9.8E-60 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 JE55_RS02480 64643719124d73c2903e2cbf29aafb09 206 Gene3D G3DSA:3.40.50.300 15 185 3.3E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02480 64643719124d73c2903e2cbf29aafb09 206 PANTHER PTHR11055 15 167 1.5E-66 T 22-04-2016 JE55_RS02480 64643719124d73c2903e2cbf29aafb09 206 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 11 182 32.557 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 JE55_RS02480 64643719124d73c2903e2cbf29aafb09 206 SUPERFAMILY SSF52540 15 180 1.89E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02480 64643719124d73c2903e2cbf29aafb09 206 Pfam PF01583 Adenylylsulphate kinase 15 166 6.5E-59 T 22-04-2016 JE55_RS06730 a7639c48a866ee1befcc6015523bf1f7 1297 PANTHER PTHR36153 611 1180 1.0E-139 T 22-04-2016 JE55_RS06730 a7639c48a866ee1befcc6015523bf1f7 1297 PANTHER PTHR36153 49 558 1.0E-139 T 22-04-2016 JE55_RS06730 a7639c48a866ee1befcc6015523bf1f7 1297 Pfam PF14331 ImcF-related N-terminal domain 190 443 5.9E-83 T 22-04-2016 IPR025743 ImcF-related, N-terminal domain JE55_RS06730 a7639c48a866ee1befcc6015523bf1f7 1297 SUPERFAMILY SSF52540 125 283 2.73E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06730 a7639c48a866ee1befcc6015523bf1f7 1297 PANTHER PTHR36153:SF1 611 1180 1.0E-139 T 22-04-2016 JE55_RS06730 a7639c48a866ee1befcc6015523bf1f7 1297 PANTHER PTHR36153:SF1 49 558 1.0E-139 T 22-04-2016 JE55_RS06730 a7639c48a866ee1befcc6015523bf1f7 1297 Pfam PF06761 Intracellular multiplication and human macrophage-killing 494 861 6.0E-96 T 22-04-2016 IPR009612 ImcF-related JE55_RS06730 a7639c48a866ee1befcc6015523bf1f7 1297 Pfam PF06744 Type VI secretion protein IcmF C-terminal 1000 1202 1.2E-48 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal JE55_RS06730 a7639c48a866ee1befcc6015523bf1f7 1297 Gene3D G3DSA:3.40.50.300 130 292 8.6E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06730 a7639c48a866ee1befcc6015523bf1f7 1297 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 14 566 4.6E-137 T 22-04-2016 IPR017731 Type VI secretion system, IcmF JE55_RS03465 329f5d0606bae5c347814f3948e95e98 264 PANTHER PTHR32125:SF1 1 240 2.2E-106 T 22-04-2016 JE55_RS03465 329f5d0606bae5c347814f3948e95e98 264 Gene3D G3DSA:3.40.1280.10 9 172 1.4E-61 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JE55_RS03465 329f5d0606bae5c347814f3948e95e98 264 Gene3D G3DSA:1.10.1270.20 174 260 4.0E-33 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JE55_RS03465 329f5d0606bae5c347814f3948e95e98 264 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 264 109.582 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JE55_RS03465 329f5d0606bae5c347814f3948e95e98 264 PANTHER PTHR32125 1 240 2.2E-106 T 22-04-2016 JE55_RS03465 329f5d0606bae5c347814f3948e95e98 264 PIRSF PIRSF000386 9 263 1.7E-92 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JE55_RS03465 329f5d0606bae5c347814f3948e95e98 264 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 31 233 5.7E-59 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JE55_RS03465 329f5d0606bae5c347814f3948e95e98 264 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 9 239 2.1E-89 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 JE55_RS03465 329f5d0606bae5c347814f3948e95e98 264 SUPERFAMILY SSF75217 9 244 1.18E-94 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases JE55_RS03710 cd851e6304a1ad21e5eeb738644cb60c 340 PANTHER PTHR30388:SF5 1 324 2.7E-78 T 22-04-2016 JE55_RS03710 cd851e6304a1ad21e5eeb738644cb60c 340 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 19 319 1.1E-100 T 22-04-2016 IPR014308 Xanthine dehydrogenase accessory protein XdhC JE55_RS03710 cd851e6304a1ad21e5eeb738644cb60c 340 PANTHER PTHR30388 1 324 2.7E-78 T 22-04-2016 JE55_RS03710 cd851e6304a1ad21e5eeb738644cb60c 340 Pfam PF13478 XdhC Rossmann domain 172 318 2.6E-36 T 22-04-2016 IPR027051 XdhC Rossmann domain JE55_RS03710 cd851e6304a1ad21e5eeb738644cb60c 340 Pfam PF02625 XdhC and CoxI family 12 71 2.3E-17 T 22-04-2016 IPR003777 XdhC- CoxI JE55_RS13720 12ab434b85c70aa371741686391bbaf5 299 Gene3D G3DSA:3.10.310.10 10 135 4.5E-44 T 22-04-2016 JE55_RS13720 12ab434b85c70aa371741686391bbaf5 299 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 11 297 1.9E-58 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- JE55_RS13720 12ab434b85c70aa371741686391bbaf5 299 Pfam PF02567 Phenazine biosynthesis-like protein 16 294 1.4E-53 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- JE55_RS13720 12ab434b85c70aa371741686391bbaf5 299 PIRSF PIRSF016184 8 298 2.7E-75 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- JE55_RS13720 12ab434b85c70aa371741686391bbaf5 299 Gene3D G3DSA:3.10.310.10 136 286 1.1E-38 T 22-04-2016 JE55_RS13720 12ab434b85c70aa371741686391bbaf5 299 PANTHER PTHR13774:SF18 1 299 8.7E-92 T 22-04-2016 JE55_RS13720 12ab434b85c70aa371741686391bbaf5 299 SUPERFAMILY SSF54506 11 298 1.12E-71 T 22-04-2016 JE55_RS13720 12ab434b85c70aa371741686391bbaf5 299 PANTHER PTHR13774 1 299 8.7E-92 T 22-04-2016 JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 SUPERFAMILY SSF54909 62 149 9.79E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.1E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 SUPERFAMILY SSF46785 1 60 2.52E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.9E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.9E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.9E-12 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 Gene3D G3DSA:3.30.70.920 55 137 4.1E-31 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.1E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 PANTHER PTHR30154:SF17 1 150 1.1E-75 T 22-04-2016 JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 SMART SM00344 1 110 6.4E-42 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 PANTHER PTHR30154 1 150 1.1E-75 T 22-04-2016 JE55_RS14745 488a183e75ee8959aaceb6731ecf295b 155 Gene3D G3DSA:1.10.10.10 2 53 4.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05120 5d7c87d7776f1cd9938706eb52635c92 324 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 319 29.107 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 JE55_RS05120 5d7c87d7776f1cd9938706eb52635c92 324 Gene3D G3DSA:1.10.287.890 211 293 3.3E-32 T 22-04-2016 JE55_RS05120 5d7c87d7776f1cd9938706eb52635c92 324 Gene3D G3DSA:3.40.50.300 11 179 1.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05120 5d7c87d7776f1cd9938706eb52635c92 324 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 14 297 9.3E-90 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 JE55_RS05120 5d7c87d7776f1cd9938706eb52635c92 324 SUPERFAMILY SSF52540 178 239 2.45E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05120 5d7c87d7776f1cd9938706eb52635c92 324 SUPERFAMILY SSF52540 14 76 2.45E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05120 5d7c87d7776f1cd9938706eb52635c92 324 Pfam PF01715 IPP transferase 46 295 1.0E-86 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 JE55_RS05120 5d7c87d7776f1cd9938706eb52635c92 324 PANTHER PTHR11088 1 315 1.9E-102 T 22-04-2016 JE55_RS05120 5d7c87d7776f1cd9938706eb52635c92 324 SUPERFAMILY SSF52540 15 157 1.64E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 SUPERFAMILY SSF56645 5 241 1.23E-90 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 119 6.3E-35 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 Gene3D G3DSA:2.40.110.10 122 219 1.7E-42 T 22-04-2016 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 2.0E-43 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 Gene3D G3DSA:1.10.540.10 7 121 2.3E-36 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 SUPERFAMILY SSF47203 228 378 4.35E-49 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 5.6E-27 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 Gene3D G3DSA:1.20.140.10 220 378 3.0E-59 T 22-04-2016 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 PANTHER PTHR10909 1 378 3.1E-218 T 22-04-2016 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 PANTHER PTHR10909:SF190 1 378 3.1E-218 T 22-04-2016 JE55_RS08910 9b41f0fb7d52cf4f38a8f5eed7374d99 378 PIRSF PIRSF016578 4 378 4.4E-15 T 22-04-2016 JE55_RS07155 299b0ec128ca7ad22242019c19ca6549 359 PIRSF PIRSF001455 4 358 2.8E-108 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 JE55_RS07155 299b0ec128ca7ad22242019c19ca6549 359 PANTHER PTHR21090 1 356 9.5E-189 T 22-04-2016 JE55_RS07155 299b0ec128ca7ad22242019c19ca6549 359 Gene3D G3DSA:1.20.1090.10 173 353 7.5E-65 T 22-04-2016 JE55_RS07155 299b0ec128ca7ad22242019c19ca6549 359 SUPERFAMILY SSF56796 3 353 9.03E-116 T 22-04-2016 JE55_RS07155 299b0ec128ca7ad22242019c19ca6549 359 Gene3D G3DSA:3.40.50.1970 3 172 1.5E-68 T 22-04-2016 JE55_RS07155 299b0ec128ca7ad22242019c19ca6549 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 349 1.5E-117 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 JE55_RS07155 299b0ec128ca7ad22242019c19ca6549 359 Pfam PF01761 3-dehydroquinate synthase 67 324 1.8E-107 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 JE55_RS07155 299b0ec128ca7ad22242019c19ca6549 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 357 42.344 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 JE55_RS07840 1e527aaeacaac1e694877307bb6a614c 402 Gene3D G3DSA:1.20.1250.20 23 197 3.1E-13 T 22-04-2016 JE55_RS07840 1e527aaeacaac1e694877307bb6a614c 402 PANTHER PTHR23514 17 393 1.7E-98 T 22-04-2016 JE55_RS07840 1e527aaeacaac1e694877307bb6a614c 402 PANTHER PTHR23514:SF13 17 393 1.7E-98 T 22-04-2016 JE55_RS07840 1e527aaeacaac1e694877307bb6a614c 402 Gene3D G3DSA:1.20.1250.20 216 395 3.5E-11 T 22-04-2016 JE55_RS07840 1e527aaeacaac1e694877307bb6a614c 402 Pfam PF07690 Major Facilitator Superfamily 32 277 5.3E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS07840 1e527aaeacaac1e694877307bb6a614c 402 SUPERFAMILY SSF103473 12 396 2.49E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 Gene3D G3DSA:3.90.700.10 275 379 2.6E-39 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 Gene3D G3DSA:1.20.58.100 451 551 3.5E-32 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 SUPERFAMILY SSF56425 269 384 4.64E-43 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 SUPERFAMILY SSF51905 387 479 4.01E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 SUPERFAMILY SSF51905 36 286 4.01E-74 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 SUPERFAMILY SSF46977 456 557 1.18E-29 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 PANTHER PTHR11632 30 564 5.4E-251 T 22-04-2016 JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 PIRSF PIRSF000171 30 557 1.8E-30 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 PANTHER PTHR11632:SF27 30 564 5.4E-251 T 22-04-2016 JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 39 551 4.2E-196 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 Gene3D G3DSA:3.50.50.60 29 274 2.7E-107 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 Gene3D G3DSA:3.50.50.60 380 438 2.7E-107 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 Pfam PF00890 FAD binding domain 41 423 3.8E-104 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 42 61 2.4E-7 T 22-04-2016 JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 408 2.4E-7 T 22-04-2016 JE55_RS12915 3264405f33e49c0119bc1156f57cade1 570 Pfam PF02910 Fumarate reductase flavoprotein C-term 472 551 1.6E-12 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 268 274 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 PANTHER PTHR14911:SF13 220 292 1.2E-39 T 22-04-2016 JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 PANTHER PTHR14911:SF13 9 177 1.2E-39 T 22-04-2016 JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 PANTHER PTHR14911:SF13 314 349 1.2E-39 T 22-04-2016 JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 SUPERFAMILY SSF53335 111 182 5.74E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 SUPERFAMILY SSF53335 309 349 5.74E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 SUPERFAMILY SSF53335 223 282 5.74E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 PANTHER PTHR14911 220 292 1.2E-39 T 22-04-2016 JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 Gene3D G3DSA:3.40.50.150 112 179 1.8E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 Gene3D G3DSA:3.40.50.150 220 343 1.8E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 Pfam PF02926 THUMP domain 8 118 5.5E-10 T 22-04-2016 IPR004114 THUMP domain GO:0003723 JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 PANTHER PTHR14911 9 177 1.2E-39 T 22-04-2016 JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 PANTHER PTHR14911 314 349 1.2E-39 T 22-04-2016 JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 Pfam PF01170 Putative RNA methylase family UPF0020 127 280 5.9E-39 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS23375 d7531f1870bbaa0cbb18ed91db57d8ea 352 SMART SM00981 21 119 7.9E-22 T 22-04-2016 IPR004114 THUMP domain GO:0003723 JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 TIGRFAM TIGR00595 priA: primosomal protein N' 234 753 3.3E-166 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 Gene3D G3DSA:3.40.50.300 206 401 3.4E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 PANTHER PTHR30580 1 755 2.0E-214 T 22-04-2016 JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 SUPERFAMILY SSF52540 529 625 1.41E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 SUPERFAMILY SSF52540 410 466 1.41E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 SUPERFAMILY SSF52540 228 382 1.41E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 Pfam PF00271 Helicase conserved C-terminal domain 530 615 2.1E-7 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 Gene3D G3DSA:3.40.50.300 484 659 4.1E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 SMART SM00490 518 615 3.1E-9 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 Pfam PF00270 DEAD/DEAH box helicase 214 380 4.2E-13 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 SMART SM00487 209 413 1.5E-15 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain JE55_RS08385 d97a1aea2f48279f9b312b150cf3c2e9 755 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 755 22.782 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 JE55_RS15220 53c09c0654c75c3c7503cd9a3016ccdb 184 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 14 97 4.0E-38 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 JE55_RS15220 53c09c0654c75c3c7503cd9a3016ccdb 184 Pfam PF01985 CRS1 / YhbY (CRM) domain 6 89 2.0E-16 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 JE55_RS15220 53c09c0654c75c3c7503cd9a3016ccdb 184 PANTHER PTHR31846 4 87 3.5E-18 T 22-04-2016 JE55_RS15220 53c09c0654c75c3c7503cd9a3016ccdb 184 Gene3D G3DSA:3.30.110.60 5 93 9.6E-28 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 JE55_RS15220 53c09c0654c75c3c7503cd9a3016ccdb 184 SUPERFAMILY SSF75471 5 91 6.41E-25 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 JE55_RS15220 53c09c0654c75c3c7503cd9a3016ccdb 184 SMART SM01103 6 89 1.0E-38 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 JE55_RS12510 5f3a061ddad98db065983a30534c0e32 483 Gene3D G3DSA:3.40.605.10 3 265 9.8E-81 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS12510 5f3a061ddad98db065983a30534c0e32 483 PANTHER PTHR11699:SF155 1 483 1.9E-230 T 22-04-2016 JE55_RS12510 5f3a061ddad98db065983a30534c0e32 483 Gene3D G3DSA:3.40.309.10 266 448 7.8E-62 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS12510 5f3a061ddad98db065983a30534c0e32 483 Pfam PF00171 Aldehyde dehydrogenase family 19 472 1.2E-144 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS12510 5f3a061ddad98db065983a30534c0e32 483 PANTHER PTHR11699 1 483 1.9E-230 T 22-04-2016 JE55_RS12510 5f3a061ddad98db065983a30534c0e32 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 JE55_RS12510 5f3a061ddad98db065983a30534c0e32 483 SUPERFAMILY SSF53720 3 479 3.93E-150 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS02145 cbaaf6085a01a87d9490b9df7c4638a9 113 SUPERFAMILY SSF54292 4 109 3.14E-31 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JE55_RS02145 cbaaf6085a01a87d9490b9df7c4638a9 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 112 3.2E-54 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 JE55_RS02145 cbaaf6085a01a87d9490b9df7c4638a9 113 Gene3D G3DSA:3.10.20.30 5 110 3.1E-32 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS02145 cbaaf6085a01a87d9490b9df7c4638a9 113 PANTHER PTHR23426 7 113 4.1E-37 T 22-04-2016 JE55_RS02145 cbaaf6085a01a87d9490b9df7c4638a9 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 92 2.1E-13 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JE55_RS02145 cbaaf6085a01a87d9490b9df7c4638a9 113 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 JE55_RS02145 cbaaf6085a01a87d9490b9df7c4638a9 113 PRINTS PR00355 Adrenodoxin signature 60 74 1.7E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 JE55_RS02145 cbaaf6085a01a87d9490b9df7c4638a9 113 PRINTS PR00355 Adrenodoxin signature 83 91 1.7E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 JE55_RS02145 cbaaf6085a01a87d9490b9df7c4638a9 113 PRINTS PR00355 Adrenodoxin signature 42 52 1.7E-9 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 Gene3D G3DSA:3.20.20.70 866 1267 1.2E-182 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 Gene3D G3DSA:3.20.20.70 466 817 4.9E-110 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 Pfam PF01645 Conserved region in glutamate synthase 828 1223 9.8E-155 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 Pfam PF00310 Glutamine amidotransferases class-II 27 450 1.4E-186 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 SUPERFAMILY SSF51395 477 1270 4.89E-262 T 22-04-2016 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 PANTHER PTHR11938 16 940 0.0 T 22-04-2016 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 PANTHER PTHR11938 960 1489 0.0 T 22-04-2016 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 PANTHER PTHR11938 1506 1557 0.0 T 22-04-2016 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 PANTHER PTHR11938:SF1 16 940 0.0 T 22-04-2016 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 PANTHER PTHR11938:SF1 960 1489 0.0 T 22-04-2016 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 PANTHER PTHR11938:SF1 1506 1557 0.0 T 22-04-2016 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 SUPERFAMILY SSF69336 1273 1553 4.45E-95 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 SUPERFAMILY SSF56235 27 452 1.03E-153 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 Pfam PF01493 GXGXG motif 1305 1491 8.4E-83 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 Pfam PF04898 Glutamate synthase central domain 481 766 3.7E-110 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 Gene3D G3DSA:2.160.20.60 1278 1561 1.9E-106 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 JE55_RS07110 e8a00c8464fa0a708c450e11bd27785d 1567 Gene3D G3DSA:3.60.20.10 27 461 1.6E-188 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 PANTHER PTHR11019 112 326 4.1E-53 T 22-04-2016 JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 SUPERFAMILY SSF46689 271 321 6.27E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 PANTHER PTHR11019:SF90 112 326 4.1E-53 T 22-04-2016 JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 Gene3D G3DSA:1.10.10.60 213 271 1.0E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 302 5.2E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 302 318 5.2E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 SUPERFAMILY SSF52317 12 196 8.7E-30 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 Gene3D G3DSA:1.10.10.60 272 320 2.0E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 Pfam PF12833 Helix-turn-helix domain 242 319 1.9E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 SMART SM00342 235 318 5.4E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 272 314 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 Gene3D G3DSA:3.40.50.880 12 194 2.4E-22 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS02695 de8c6c6260012b77b35129bc733b3f12 345 SUPERFAMILY SSF46689 218 269 4.12E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS11550 a228825c39955204dffb076ae55430e9 147 SUPERFAMILY SSF54197 1 116 5.1E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 JE55_RS11550 a228825c39955204dffb076ae55430e9 147 Pfam PF01230 HIT domain 12 98 1.2E-15 T 22-04-2016 IPR001310 Histidine triad (HIT) protein JE55_RS11550 a228825c39955204dffb076ae55430e9 147 Gene3D G3DSA:3.30.428.10 1 139 4.5E-41 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 JE55_RS11550 a228825c39955204dffb076ae55430e9 147 PANTHER PTHR23089:SF13 21 138 5.5E-17 T 22-04-2016 JE55_RS11550 a228825c39955204dffb076ae55430e9 147 PANTHER PTHR23089 21 138 5.5E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein JE55_RS17955 7b2d6013d543149b696989c94a4c37aa 809 SUPERFAMILY SSF82861 550 633 3.14E-11 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 JE55_RS17955 7b2d6013d543149b696989c94a4c37aa 809 SUPERFAMILY SSF50182 635 700 7.85E-15 T 22-04-2016 IPR010920 LSM domain JE55_RS17955 7b2d6013d543149b696989c94a4c37aa 809 SUPERFAMILY SSF82689 710 797 2.22E-14 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 JE55_RS17955 7b2d6013d543149b696989c94a4c37aa 809 PANTHER PTHR30347:SF3 119 800 9.0E-118 T 22-04-2016 JE55_RS17955 7b2d6013d543149b696989c94a4c37aa 809 Pfam PF12607 Protein of unknown function (DUF3772) 143 205 9.9E-19 T 22-04-2016 IPR022249 Domain of unknown function DUF3772 JE55_RS17955 7b2d6013d543149b696989c94a4c37aa 809 Gene3D G3DSA:2.30.30.60 650 698 5.7E-15 T 22-04-2016 JE55_RS17955 7b2d6013d543149b696989c94a4c37aa 809 Pfam PF00924 Mechanosensitive ion channel 593 791 7.9E-42 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JE55_RS17955 7b2d6013d543149b696989c94a4c37aa 809 Gene3D G3DSA:3.30.70.100 718 790 1.7E-11 T 22-04-2016 JE55_RS17955 7b2d6013d543149b696989c94a4c37aa 809 PANTHER PTHR30347 119 800 9.0E-118 T 22-04-2016 JE55_RS16195 e29e41f778b667354afb21cdc4d57004 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.0E-17 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JE55_RS16195 e29e41f778b667354afb21cdc4d57004 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.0E-17 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JE55_RS16195 e29e41f778b667354afb21cdc4d57004 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.0E-17 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JE55_RS16195 e29e41f778b667354afb21cdc4d57004 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.149 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JE55_RS16195 e29e41f778b667354afb21cdc4d57004 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 2.1E-25 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 JE55_RS16195 e29e41f778b667354afb21cdc4d57004 65 Pfam PF01632 Ribosomal protein L35 2 62 3.4E-23 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS16195 e29e41f778b667354afb21cdc4d57004 65 PANTHER PTHR33343 1 63 8.7E-22 T 22-04-2016 JE55_RS16195 e29e41f778b667354afb21cdc4d57004 65 SUPERFAMILY SSF143034 2 64 1.01E-22 T 22-04-2016 JE55_RS16195 e29e41f778b667354afb21cdc4d57004 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS06535 9dff8e9afdd6fabace758363616257df 467 TIGRFAM TIGR01773 GABAperm: GABA permease 7 449 2.0E-221 T 22-04-2016 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 JE55_RS06535 9dff8e9afdd6fabace758363616257df 467 Pfam PF00324 Amino acid permease 16 424 7.6E-112 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 JE55_RS06535 9dff8e9afdd6fabace758363616257df 467 PANTHER PTHR11785 4 450 6.4E-246 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS06535 9dff8e9afdd6fabace758363616257df 467 PIRSF PIRSF006060 1 457 2.4E-75 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS06535 9dff8e9afdd6fabace758363616257df 467 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 JE55_RS06535 9dff8e9afdd6fabace758363616257df 467 PANTHER PTHR11785:SF24 4 450 6.4E-246 T 22-04-2016 JE55_RS12390 f798d6dd98f9fbb9c88f3927000fd282 344 PANTHER PTHR11019:SF58 68 334 1.5E-81 T 22-04-2016 JE55_RS12390 f798d6dd98f9fbb9c88f3927000fd282 344 Gene3D G3DSA:3.40.50.880 14 231 5.2E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS12390 f798d6dd98f9fbb9c88f3927000fd282 344 Gene3D G3DSA:1.10.10.60 280 329 5.2E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS12390 f798d6dd98f9fbb9c88f3927000fd282 344 Gene3D G3DSA:1.10.10.60 232 277 2.4E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS12390 f798d6dd98f9fbb9c88f3927000fd282 344 Pfam PF01965 DJ-1/PfpI family 14 188 1.0E-17 T 22-04-2016 IPR002818 DJ-1/PfpI JE55_RS12390 f798d6dd98f9fbb9c88f3927000fd282 344 SUPERFAMILY SSF46689 228 276 6.27E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS12390 f798d6dd98f9fbb9c88f3927000fd282 344 SMART SM00342 243 326 1.0E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS12390 f798d6dd98f9fbb9c88f3927000fd282 344 SUPERFAMILY SSF46689 280 329 4.93E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS12390 f798d6dd98f9fbb9c88f3927000fd282 344 Pfam PF12833 Helix-turn-helix domain 249 328 8.8E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS12390 f798d6dd98f9fbb9c88f3927000fd282 344 SUPERFAMILY SSF52317 13 207 1.64E-42 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS12390 f798d6dd98f9fbb9c88f3927000fd282 344 PANTHER PTHR11019 68 334 1.5E-81 T 22-04-2016 JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 SUPERFAMILY SSF69279 233 357 1.7E-16 T 22-04-2016 JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 SUPERFAMILY SSF69279 409 425 1.7E-16 T 22-04-2016 JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 590 690 1.6E-25 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 SUPERFAMILY SSF69279 23 213 1.66E-44 T 22-04-2016 JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 Pfam PF05954 Phage late control gene D protein (GPD) 42 355 2.7E-71 T 22-04-2016 JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 SUPERFAMILY SSF69255 439 537 3.14E-17 T 22-04-2016 JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 Gene3D G3DSA:3.55.50.10 113 217 4.2E-27 T 22-04-2016 JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 752 911 3.4E-39 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 Gene3D G3DSA:2.40.50.230 444 537 6.6E-23 T 22-04-2016 IPR006531 Gp5 N-terminal JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 37 544 8.8E-56 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 PANTHER PTHR32305:SF7 1 545 2.7E-41 T 22-04-2016 JE55_RS15670 cef42a80e4074b16ae2150f3c7f16335 944 PANTHER PTHR32305 1 545 2.7E-41 T 22-04-2016 JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 168 438 2.9E-99 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 Pfam PF02881 SRP54-type protein, helical bundle domain 158 218 7.1E-11 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 SMART SM00382 238 417 2.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 Gene3D G3DSA:1.20.120.140 169 250 8.6E-27 T 22-04-2016 JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 PANTHER PTHR11564 139 438 2.8E-120 T 22-04-2016 JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 SMART SM00963 149 225 7.5E-20 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 SUPERFAMILY SSF52540 238 438 7.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 168 439 59.626 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 SMART SM00962 239 439 2.0E-109 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 Pfam PF00448 SRP54-type protein, GTPase domain 240 439 5.5E-72 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 412 425 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 SUPERFAMILY SSF47364 144 218 6.15E-18 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 Gene3D G3DSA:3.40.50.300 251 439 3.5E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11075 1594bb439fade94cabafd961cb1c96ff 439 PANTHER PTHR11564:SF16 139 438 2.8E-120 T 22-04-2016 JE55_RS11565 7080913cf01de927225e2937125bbc96 339 Pfam PF04280 Tim44-like domain 207 335 1.3E-15 T 22-04-2016 IPR007379 Tim44-like domain JE55_RS11565 7080913cf01de927225e2937125bbc96 339 PANTHER PTHR41542:SF1 16 336 2.5E-31 T 22-04-2016 JE55_RS11565 7080913cf01de927225e2937125bbc96 339 SMART SM00978 206 335 1.2E-45 T 22-04-2016 IPR007379 Tim44-like domain JE55_RS11565 7080913cf01de927225e2937125bbc96 339 PANTHER PTHR41542 16 336 2.5E-31 T 22-04-2016 JE55_RS11565 7080913cf01de927225e2937125bbc96 339 SUPERFAMILY SSF54427 198 337 1.58E-13 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS06920 2305def47cfbb6d4448421b306bca34d 206 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 12 199 2.8E-59 T 22-04-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 JE55_RS06920 2305def47cfbb6d4448421b306bca34d 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 158 170 2.5E-8 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 JE55_RS06920 2305def47cfbb6d4448421b306bca34d 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 171 183 2.5E-8 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 JE55_RS06920 2305def47cfbb6d4448421b306bca34d 206 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 2.5E-8 T 22-04-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 JE55_RS06920 2305def47cfbb6d4448421b306bca34d 206 Pfam PF00355 Rieske [2Fe-2S] domain 120 186 1.2E-10 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS06920 2305def47cfbb6d4448421b306bca34d 206 SUPERFAMILY SSF50022 33 201 9.39E-41 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS06920 2305def47cfbb6d4448421b306bca34d 206 PANTHER PTHR10134 1 203 5.5E-66 T 22-04-2016 IPR014349 Rieske iron-sulphur protein GO:0016679|GO:0055114 JE55_RS06920 2305def47cfbb6d4448421b306bca34d 206 Gene3D G3DSA:2.102.10.10 9 203 3.3E-42 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS06920 2305def47cfbb6d4448421b306bca34d 206 PANTHER PTHR10134:SF8 1 203 5.5E-66 T 22-04-2016 JE55_RS06920 2305def47cfbb6d4448421b306bca34d 206 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 42 6.5E-8 T 22-04-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 JE55_RS06950 599d88f89d827a8c5a1771770a628ec2 77 Pfam PF02416 mttA/Hcf106 family 4 48 6.4E-14 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 JE55_RS06950 599d88f89d827a8c5a1771770a628ec2 77 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.8E-23 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 JE55_RS06950 599d88f89d827a8c5a1771770a628ec2 77 PANTHER PTHR33162 1 70 6.8E-18 T 22-04-2016 JE55_RS06950 599d88f89d827a8c5a1771770a628ec2 77 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 21.663 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 JE55_RS14215 b59614e9b5f4f2bdb56135f465e7f768 106 PANTHER PTHR30561 1 104 1.9E-44 T 22-04-2016 JE55_RS14215 b59614e9b5f4f2bdb56135f465e7f768 106 SUPERFAMILY SSF103481 5 104 1.57E-18 T 22-04-2016 JE55_RS14215 b59614e9b5f4f2bdb56135f465e7f768 106 PANTHER PTHR30561:SF0 1 104 1.9E-44 T 22-04-2016 JE55_RS14215 b59614e9b5f4f2bdb56135f465e7f768 106 Pfam PF00893 Small Multidrug Resistance protein 1 93 9.3E-27 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 JE55_RS04725 9555ddcabc1b6144fcb1cb04a418d2ae 76 Pfam PF10932 Protein of unknown function (DUF2783) 3 60 9.8E-29 T 22-04-2016 IPR021233 Protein of unknown function DUF2783 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 SUPERFAMILY SSF58104 262 514 2.62E-56 T 22-04-2016 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 287 316 2.02E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 422 2.02E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 441 470 2.02E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 364 391 2.02E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 2.02E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 PANTHER PTHR32089:SF63 248 516 2.1E-91 T 22-04-2016 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 Pfam PF02203 Tar ligand binding domain homologue 5 175 6.5E-22 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 PANTHER PTHR32089 248 516 2.1E-91 T 22-04-2016 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 SMART SM00283 266 513 2.2E-71 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 318 512 4.9E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS10055 c82e9ee1671e2bf3a54380020154f919 516 Gene3D G3DSA:1.10.287.950 281 485 5.6E-54 T 22-04-2016 JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 189 6.6E-37 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 Gene3D G3DSA:1.10.1040.10 610 692 9.2E-13 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 SUPERFAMILY SSF51735 293 471 9.21E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 Gene3D G3DSA:3.90.226.10 3 277 7.0E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 SUPERFAMILY SSF52096 3 287 1.65E-62 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 Gene3D G3DSA:3.40.50.720 292 477 1.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 PANTHER PTHR23309:SF9 1 681 5.6E-299 T 22-04-2016 JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 296 471 3.1E-63 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 476 568 3.9E-26 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 604 689 1.3E-6 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 SUPERFAMILY SSF48179 475 577 3.4E-25 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 PANTHER PTHR23309 1 681 5.6E-299 T 22-04-2016 JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 Gene3D G3DSA:1.10.1040.10 478 568 6.1E-21 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS00615 7c532380f9180c823809ba7e56d094a9 694 SUPERFAMILY SSF48179 600 692 7.31E-22 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS00235 a760855b674539a5d9da278d561aa399 837 SUPERFAMILY SSF48019 243 363 2.38E-32 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 JE55_RS00235 a760855b674539a5d9da278d561aa399 837 PANTHER PTHR11669 1 360 8.8E-163 T 22-04-2016 JE55_RS00235 a760855b674539a5d9da278d561aa399 837 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 9.2E-127 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 JE55_RS00235 a760855b674539a5d9da278d561aa399 837 PANTHER PTHR11669:SF0 1 360 8.8E-163 T 22-04-2016 JE55_RS00235 a760855b674539a5d9da278d561aa399 837 Gene3D G3DSA:1.20.272.10 243 360 2.9E-43 T 22-04-2016 JE55_RS00235 a760855b674539a5d9da278d561aa399 837 Gene3D G3DSA:1.10.8.60 167 242 1.8E-33 T 22-04-2016 JE55_RS00235 a760855b674539a5d9da278d561aa399 837 SUPERFAMILY SSF52540 34 225 7.95E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00235 a760855b674539a5d9da278d561aa399 837 SMART SM00382 37 179 5.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS00235 a760855b674539a5d9da278d561aa399 837 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 358 1.9E-24 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 JE55_RS00235 a760855b674539a5d9da278d561aa399 837 Gene3D G3DSA:3.40.50.300 2 166 4.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00235 a760855b674539a5d9da278d561aa399 837 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 704 819 2.6E-9 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS00235 a760855b674539a5d9da278d561aa399 837 Pfam PF13177 DNA polymerase III, delta subunit 20 178 9.2E-40 T 22-04-2016 JE55_RS00805 bf63355fdb4245d2da1e8f0b661afafc 141 PANTHER PTHR37465 1 91 4.3E-16 T 22-04-2016 JE55_RS00805 bf63355fdb4245d2da1e8f0b661afafc 141 PANTHER PTHR37465:SF1 1 91 4.3E-16 T 22-04-2016 JE55_RS00805 bf63355fdb4245d2da1e8f0b661afafc 141 Pfam PF05488 PAAR motif 9 83 2.7E-16 T 22-04-2016 IPR008727 PAAR motif JE55_RS02680 d3a7fb41efd664c4e76293136c9475d3 343 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 3.6E-134 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 JE55_RS02680 d3a7fb41efd664c4e76293136c9475d3 343 Gene3D G3DSA:2.40.40.20 274 338 1.0E-15 T 22-04-2016 JE55_RS02680 d3a7fb41efd664c4e76293136c9475d3 343 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 338 1.3E-154 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 JE55_RS02680 d3a7fb41efd664c4e76293136c9475d3 343 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 338 3.2E-143 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 JE55_RS02680 d3a7fb41efd664c4e76293136c9475d3 343 PANTHER PTHR30420 1 343 6.5E-130 T 22-04-2016 JE55_RS02680 d3a7fb41efd664c4e76293136c9475d3 343 PANTHER PTHR30420:SF1 1 343 6.5E-130 T 22-04-2016 JE55_RS02680 d3a7fb41efd664c4e76293136c9475d3 343 Gene3D G3DSA:3.40.630.30 117 143 1.4E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02680 d3a7fb41efd664c4e76293136c9475d3 343 Gene3D G3DSA:3.40.630.30 2 84 1.4E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02680 d3a7fb41efd664c4e76293136c9475d3 343 SUPERFAMILY SSF55729 1 338 6.95E-124 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS01885 d15235808dcb6b350034c63be6b2a8e6 359 Gene3D G3DSA:3.90.226.10 4 181 3.1E-41 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS01885 d15235808dcb6b350034c63be6b2a8e6 359 PANTHER PTHR10381 50 247 7.5E-49 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JE55_RS01885 d15235808dcb6b350034c63be6b2a8e6 359 Pfam PF00574 Clp protease 35 181 1.2E-28 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JE55_RS01885 d15235808dcb6b350034c63be6b2a8e6 359 PRINTS PR00127 Clp protease catalytic subunit P signature 84 101 5.6E-6 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JE55_RS01885 d15235808dcb6b350034c63be6b2a8e6 359 PRINTS PR00127 Clp protease catalytic subunit P signature 160 179 5.6E-6 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JE55_RS01885 d15235808dcb6b350034c63be6b2a8e6 359 PRINTS PR00127 Clp protease catalytic subunit P signature 53 73 5.6E-6 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 JE55_RS01885 d15235808dcb6b350034c63be6b2a8e6 359 PANTHER PTHR10381:SF23 50 247 7.5E-49 T 22-04-2016 JE55_RS01885 d15235808dcb6b350034c63be6b2a8e6 359 SUPERFAMILY SSF52096 19 182 1.49E-42 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS04035 326f9d4ffaed793e5a657b2fd864cf78 312 SUPERFAMILY SSF161098 71 297 6.02E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS04035 326f9d4ffaed793e5a657b2fd864cf78 312 PANTHER PTHR30193 2 310 2.4E-120 T 22-04-2016 JE55_RS04035 326f9d4ffaed793e5a657b2fd864cf78 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 296 3.6E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS04035 326f9d4ffaed793e5a657b2fd864cf78 312 PANTHER PTHR30193:SF29 2 310 2.4E-120 T 22-04-2016 JE55_RS04035 326f9d4ffaed793e5a657b2fd864cf78 312 Gene3D G3DSA:1.10.3720.10 77 303 5.5E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS00960 79c81169b50bddd3741d018b16aa97c3 476 SUPERFAMILY SSF51338 397 471 2.77E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS00960 79c81169b50bddd3741d018b16aa97c3 476 SUPERFAMILY SSF51338 35 84 2.77E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS00960 79c81169b50bddd3741d018b16aa97c3 476 PANTHER PTHR11271:SF37 36 473 9.3E-186 T 22-04-2016 JE55_RS00960 79c81169b50bddd3741d018b16aa97c3 476 Pfam PF01979 Amidohydrolase family 81 445 3.2E-59 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 JE55_RS00960 79c81169b50bddd3741d018b16aa97c3 476 PANTHER PTHR11271 36 473 9.3E-186 T 22-04-2016 JE55_RS00960 79c81169b50bddd3741d018b16aa97c3 476 Gene3D G3DSA:3.20.20.140 90 415 9.3E-110 T 22-04-2016 JE55_RS00960 79c81169b50bddd3741d018b16aa97c3 476 SUPERFAMILY SSF51556 84 397 1.45E-95 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS00960 79c81169b50bddd3741d018b16aa97c3 476 Gene3D G3DSA:2.30.40.10 28 89 2.0E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS05100 a1a342875aed09d998c90c404d247263 278 Pfam PF13230 Glutamine amidotransferases class-II 28 270 4.1E-19 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 JE55_RS05100 a1a342875aed09d998c90c404d247263 278 PANTHER PTHR11907 224 272 5.4E-76 T 22-04-2016 JE55_RS05100 a1a342875aed09d998c90c404d247263 278 PANTHER PTHR11907 1 203 5.4E-76 T 22-04-2016 JE55_RS05100 a1a342875aed09d998c90c404d247263 278 SUPERFAMILY SSF56235 2 270 1.2E-33 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS05100 a1a342875aed09d998c90c404d247263 278 PANTHER PTHR11907:SF1 224 272 5.4E-76 T 22-04-2016 JE55_RS05100 a1a342875aed09d998c90c404d247263 278 PANTHER PTHR11907:SF1 1 203 5.4E-76 T 22-04-2016 JE55_RS05100 a1a342875aed09d998c90c404d247263 278 Gene3D G3DSA:3.60.20.10 1 270 3.0E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 PANTHER PTHR11615 365 412 0.0 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 PANTHER PTHR11615 848 873 0.0 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 PANTHER PTHR11615 34 347 0.0 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 PANTHER PTHR11615 992 1226 0.0 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 PANTHER PTHR11615 697 832 0.0 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 Gene3D G3DSA:3.40.228.10 224 336 4.3E-86 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 Gene3D G3DSA:3.40.228.10 492 611 4.3E-86 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 Gene3D G3DSA:2.40.40.20 1053 1231 6.5E-41 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 SMART SM00926 43 105 2.8E-8 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1232 0.0 T 22-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 Pfam PF01568 Molydopterin dinucleotide binding domain 1085 1199 4.5E-22 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 SUPERFAMILY SSF53706 4 1066 0.0 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1122 1149 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 Pfam PF00384 Molybdopterin oxidoreductase 108 829 2.7E-161 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 PANTHER PTHR11615:SF165 365 412 0.0 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 PANTHER PTHR11615:SF165 848 873 0.0 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 PANTHER PTHR11615:SF165 34 347 0.0 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 PANTHER PTHR11615:SF165 992 1226 0.0 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 PANTHER PTHR11615:SF165 697 832 0.0 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 Gene3D G3DSA:3.40.50.740 652 830 1.1E-67 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 Gene3D G3DSA:3.40.50.740 108 223 1.1E-67 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 Gene3D G3DSA:4.10.1200.10 1 26 1.4E-9 T 22-04-2016 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.0E-16 T 22-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 SUPERFAMILY SSF50692 1077 1233 3.39E-46 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain JE55_RS02270 9fc107aef1453f501a55f268d455f8a1 1241 Gene3D G3DSA:2.20.25.90 52 98 9.5E-32 T 22-04-2016 JE55_RS09760 72ad5127976816b5970c59a68d86e7d9 163 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 7 56 2.7E-17 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 JE55_RS09760 72ad5127976816b5970c59a68d86e7d9 163 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site JE55_RS09760 72ad5127976816b5970c59a68d86e7d9 163 Pfam PF00460 Flagella basal body rod protein 12 39 7.4E-7 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JE55_RS09760 72ad5127976816b5970c59a68d86e7d9 163 PIRSF PIRSF002889 1 160 3.8E-36 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 JE55_RS09760 72ad5127976816b5970c59a68d86e7d9 163 PANTHER PTHR30435 2 65 8.8E-37 T 22-04-2016 JE55_RS09760 72ad5127976816b5970c59a68d86e7d9 163 PANTHER PTHR30435 81 158 8.8E-37 T 22-04-2016 JE55_RS09760 72ad5127976816b5970c59a68d86e7d9 163 PANTHER PTHR30435:SF12 2 65 8.8E-37 T 22-04-2016 JE55_RS09760 72ad5127976816b5970c59a68d86e7d9 163 PANTHER PTHR30435:SF12 81 158 8.8E-37 T 22-04-2016 JE55_RS06415 d77f8b3ab8954c9ed7b7406319464761 158 PANTHER PTHR12418 29 144 1.7E-43 T 22-04-2016 JE55_RS06415 d77f8b3ab8954c9ed7b7406319464761 158 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 37 148 1.1E-45 T 22-04-2016 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- JE55_RS06415 d77f8b3ab8954c9ed7b7406319464761 158 Pfam PF03061 Thioesterase superfamily 66 139 9.9E-13 T 22-04-2016 IPR006683 Thioesterase domain JE55_RS06415 d77f8b3ab8954c9ed7b7406319464761 158 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 36 146 5.3E-25 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain JE55_RS06415 d77f8b3ab8954c9ed7b7406319464761 158 PANTHER PTHR12418:SF24 29 144 1.7E-43 T 22-04-2016 JE55_RS06415 d77f8b3ab8954c9ed7b7406319464761 158 Gene3D G3DSA:3.10.129.10 21 153 1.0E-45 T 22-04-2016 IPR029069 HotDog domain JE55_RS06415 d77f8b3ab8954c9ed7b7406319464761 158 SUPERFAMILY SSF54637 23 145 5.79E-30 T 22-04-2016 IPR029069 HotDog domain JE55_RS15265 411c50e48f7ff8b18d63f2fe69c63160 234 Gene3D G3DSA:1.20.58.220 125 226 1.6E-31 T 22-04-2016 JE55_RS15265 411c50e48f7ff8b18d63f2fe69c63160 234 Gene3D G3DSA:1.20.58.220 5 116 2.6E-34 T 22-04-2016 JE55_RS15265 411c50e48f7ff8b18d63f2fe69c63160 234 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 8 220 8.7E-77 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 JE55_RS15265 411c50e48f7ff8b18d63f2fe69c63160 234 PANTHER PTHR10010:SF14 1 223 5.9E-71 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 JE55_RS15265 411c50e48f7ff8b18d63f2fe69c63160 234 SUPERFAMILY SSF109755 8 226 7.95E-67 T 22-04-2016 JE55_RS15265 411c50e48f7ff8b18d63f2fe69c63160 234 PIRSF PIRSF003107 3 224 4.0E-63 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 JE55_RS15265 411c50e48f7ff8b18d63f2fe69c63160 234 Pfam PF01895 PhoU domain 22 109 3.7E-19 T 22-04-2016 IPR026022 PhoU domain JE55_RS15265 411c50e48f7ff8b18d63f2fe69c63160 234 Pfam PF01895 PhoU domain 130 210 5.1E-17 T 22-04-2016 IPR026022 PhoU domain JE55_RS15265 411c50e48f7ff8b18d63f2fe69c63160 234 PANTHER PTHR10010 1 223 5.9E-71 T 22-04-2016 JE55_RS14660 03643b0832e8e8c6910f09e74ae153e7 185 SUPERFAMILY SSF49503 48 181 1.55E-31 T 22-04-2016 IPR008972 Cupredoxin JE55_RS14660 03643b0832e8e8c6910f09e74ae153e7 185 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 110 158 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 JE55_RS14660 03643b0832e8e8c6910f09e74ae153e7 185 Gene3D G3DSA:2.60.40.420 13 165 5.2E-27 T 22-04-2016 IPR008972 Cupredoxin JE55_RS14660 03643b0832e8e8c6910f09e74ae153e7 185 PANTHER PTHR22888 13 47 5.9E-52 T 22-04-2016 JE55_RS14660 03643b0832e8e8c6910f09e74ae153e7 185 PANTHER PTHR22888 70 185 5.9E-52 T 22-04-2016 JE55_RS14660 03643b0832e8e8c6910f09e74ae153e7 185 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 91 163 1.1E-6 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 JE55_RS14660 03643b0832e8e8c6910f09e74ae153e7 185 PANTHER PTHR22888:SF12 13 47 5.9E-52 T 22-04-2016 JE55_RS14660 03643b0832e8e8c6910f09e74ae153e7 185 PANTHER PTHR22888:SF12 70 185 5.9E-52 T 22-04-2016 JE55_RS08550 24a4136b26c3cf89c5c43c9df89e3061 176 SUPERFAMILY SSF55154 3 168 6.7E-35 T 22-04-2016 IPR033469 CYTH-like domain JE55_RS08550 24a4136b26c3cf89c5c43c9df89e3061 176 Gene3D G3DSA:2.40.320.10 3 169 3.9E-40 T 22-04-2016 IPR023577 CYTH domain JE55_RS08550 24a4136b26c3cf89c5c43c9df89e3061 176 PANTHER PTHR21028 1 174 4.7E-43 T 22-04-2016 JE55_RS08550 24a4136b26c3cf89c5c43c9df89e3061 176 Pfam PF01928 CYTH domain 3 164 1.9E-15 T 22-04-2016 IPR023577 CYTH domain JE55_RS08550 24a4136b26c3cf89c5c43c9df89e3061 176 ProDom PD009560 CYCLASE ADENYLATE CYCLASE ADENYLYL CYAB LYASE CLASS CYAB-TYPE THERMOPHILIC MJ0240 6 140 7.0E-4 T 22-04-2016 JE55_RS08550 24a4136b26c3cf89c5c43c9df89e3061 176 SMART SM01118 2 170 1.1E-13 T 22-04-2016 IPR023577 CYTH domain JE55_RS08550 24a4136b26c3cf89c5c43c9df89e3061 176 PANTHER PTHR21028:SF2 1 174 4.7E-43 T 22-04-2016 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 Gene3D G3DSA:3.40.50.720 353 416 2.5E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS03500 16b62d309c164887ab842248aa98a424 428 Gene3D G3DSA:3.40.50.720 194 269 2.5E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS03500 16b62d309c164887ab842248aa98a424 428 Gene3D G3DSA:3.40.50.720 1 96 2.5E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS03500 16b62d309c164887ab842248aa98a424 428 SUPERFAMILY SSF54373 269 359 1.31E-16 T 22-04-2016 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 PANTHER PTHR13847:SF148 107 425 3.2E-233 T 22-04-2016 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 PANTHER PTHR13847:SF148 1 63 3.2E-233 T 22-04-2016 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 50.923 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 Pfam PF01266 FAD dependent oxidoreductase 2 397 2.1E-68 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 SUPERFAMILY SSF51905 107 271 3.11E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 SUPERFAMILY SSF51905 1 54 3.11E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 SUPERFAMILY SSF51905 359 416 3.11E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 Gene3D G3DSA:3.30.9.10 136 193 1.2E-14 T 22-04-2016 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 Gene3D G3DSA:3.30.9.10 270 352 1.2E-14 T 22-04-2016 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 PANTHER PTHR13847 107 425 3.2E-233 T 22-04-2016 JE55_RS03500 16b62d309c164887ab842248aa98a424 428 PANTHER PTHR13847 1 63 3.2E-233 T 22-04-2016 JE55_RS13110 127a9d84c16301036db56b724041ee10 365 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 345 2.5E-119 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 JE55_RS13110 127a9d84c16301036db56b724041ee10 365 PANTHER PTHR33529 1 359 4.2E-60 T 22-04-2016 JE55_RS13110 127a9d84c16301036db56b724041ee10 365 PANTHER PTHR33529:SF2 1 359 4.2E-60 T 22-04-2016 JE55_RS13110 127a9d84c16301036db56b724041ee10 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 345 4.7E-61 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 JE55_RS16445 1626e50455c8b6fe9b786287bb7c4833 447 PANTHER PTHR30258:SF3 40 406 4.0E-114 T 22-04-2016 JE55_RS16445 1626e50455c8b6fe9b786287bb7c4833 447 Pfam PF00437 Type II/IV secretion system protein 90 365 1.2E-76 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 JE55_RS16445 1626e50455c8b6fe9b786287bb7c4833 447 SUPERFAMILY SSF52540 69 397 1.34E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16445 1626e50455c8b6fe9b786287bb7c4833 447 Gene3D G3DSA:3.30.450.90 86 183 2.3E-32 T 22-04-2016 JE55_RS16445 1626e50455c8b6fe9b786287bb7c4833 447 PANTHER PTHR30258 40 406 4.0E-114 T 22-04-2016 JE55_RS16445 1626e50455c8b6fe9b786287bb7c4833 447 Gene3D G3DSA:3.40.50.300 186 399 2.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02805 d7a70e61e437119bf27adb89c616e5b1 219 PANTHER PTHR12151 60 215 6.0E-50 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC JE55_RS02805 d7a70e61e437119bf27adb89c616e5b1 219 PANTHER PTHR12151:SF0 60 215 6.0E-50 T 22-04-2016 JE55_RS02805 d7a70e61e437119bf27adb89c616e5b1 219 Gene3D G3DSA:3.40.30.10 30 215 9.3E-54 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS02805 d7a70e61e437119bf27adb89c616e5b1 219 SUPERFAMILY SSF52833 60 215 1.21E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS02805 d7a70e61e437119bf27adb89c616e5b1 219 Pfam PF02630 SCO1/SenC 60 194 1.3E-34 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC JE55_RS00065 59e196341039a3aff81484046b113c2d 274 Pfam PF13525 Outer membrane lipoprotein 43 247 1.2E-59 T 22-04-2016 JE55_RS00065 59e196341039a3aff81484046b113c2d 274 SUPERFAMILY SSF48452 45 255 4.94E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS00065 59e196341039a3aff81484046b113c2d 274 PANTHER PTHR37423 2 260 9.8E-74 T 22-04-2016 JE55_RS00065 59e196341039a3aff81484046b113c2d 274 Gene3D G3DSA:1.25.40.10 45 234 3.6E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS00065 59e196341039a3aff81484046b113c2d 274 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 14 258 5.0E-83 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD JE55_RS00065 59e196341039a3aff81484046b113c2d 274 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 9 254 48.01 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD JE55_RS05340 de2d749704f11f6ccea2cbf104eaa94f 268 Pfam PF06299 Protein of unknown function (DUF1045) 71 229 1.7E-50 T 22-04-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 JE55_RS05340 de2d749704f11f6ccea2cbf104eaa94f 268 PIRSF PIRSF033328 12 247 3.8E-42 T 22-04-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 JE55_RS05340 de2d749704f11f6ccea2cbf104eaa94f 268 TIGRFAM TIGR03223 Phn_opern_protn: putative phosphonate metabolism protein 12 238 7.2E-84 T 22-04-2016 IPR009389 Protein of unknown function DUF1045 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 177 1.3E-46 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 Gene3D G3DSA:1.10.520.20 2 107 1.0E-25 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 PANTHER PTHR11910 8 178 8.6E-34 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 9.7E-37 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 PRINTS PR00125 ATP synthase delta subunit signature 87 101 1.7E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 PRINTS PR00125 ATP synthase delta subunit signature 76 87 1.7E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 PRINTS PR00125 ATP synthase delta subunit signature 137 152 1.7E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.7E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 PRINTS PR00125 ATP synthase delta subunit signature 152 170 1.7E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 PANTHER PTHR11910:SF1 8 178 8.6E-34 T 22-04-2016 JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 179 18.82 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 JE55_RS08435 656671bbce1a570e2bf1fd75a14390b2 179 SUPERFAMILY SSF47928 3 107 6.8E-21 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain JE55_RS15390 f80574eda75cdaa891878bc3a59b0487 81 SUPERFAMILY SSF56349 3 56 1.59E-14 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS15390 f80574eda75cdaa891878bc3a59b0487 81 Gene3D G3DSA:1.10.443.10 3 57 1.7E-13 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS15390 f80574eda75cdaa891878bc3a59b0487 81 PANTHER PTHR30349 2 75 6.2E-12 T 22-04-2016 JE55_RS15390 f80574eda75cdaa891878bc3a59b0487 81 PANTHER PTHR30349:SF20 2 75 6.2E-12 T 22-04-2016 JE55_RS15390 f80574eda75cdaa891878bc3a59b0487 81 Pfam PF00589 Phage integrase family 3 46 6.3E-12 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS15415 7d2948b551493737b3dd840366c9fd34 141 PANTHER PTHR37465 1 94 3.0E-16 T 22-04-2016 JE55_RS15415 7d2948b551493737b3dd840366c9fd34 141 PANTHER PTHR37465:SF1 1 94 3.0E-16 T 22-04-2016 JE55_RS15415 7d2948b551493737b3dd840366c9fd34 141 Pfam PF05488 PAAR motif 9 83 2.7E-16 T 22-04-2016 IPR008727 PAAR motif JE55_RS03445 582dd833831c6c794e8d267783775c67 312 PANTHER PTHR38684 283 312 1.3E-27 T 22-04-2016 JE55_RS03445 582dd833831c6c794e8d267783775c67 312 PANTHER PTHR38684 2 263 1.3E-27 T 22-04-2016 JE55_RS03445 582dd833831c6c794e8d267783775c67 312 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 312 67.489 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 JE55_RS03445 582dd833831c6c794e8d267783775c67 312 Pfam PF03186 CobD/Cbib protein 28 255 6.8E-26 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 JE55_RS04950 9fd37b11f59315c78c22de67b1a1d34b 309 SUPERFAMILY SSF52317 7 162 2.21E-7 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS04950 9fd37b11f59315c78c22de67b1a1d34b 309 SUPERFAMILY SSF46689 185 234 3.17E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS04950 9fd37b11f59315c78c22de67b1a1d34b 309 Gene3D G3DSA:1.10.10.60 239 284 1.5E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS04950 9fd37b11f59315c78c22de67b1a1d34b 309 PANTHER PTHR11019:SF68 132 291 7.0E-23 T 22-04-2016 JE55_RS04950 9fd37b11f59315c78c22de67b1a1d34b 309 Pfam PF12833 Helix-turn-helix domain 207 284 5.3E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS04950 9fd37b11f59315c78c22de67b1a1d34b 309 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 279 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JE55_RS04950 9fd37b11f59315c78c22de67b1a1d34b 309 SMART SM00342 200 283 1.9E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS04950 9fd37b11f59315c78c22de67b1a1d34b 309 SUPERFAMILY SSF46689 236 284 2.09E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS04950 9fd37b11f59315c78c22de67b1a1d34b 309 PANTHER PTHR11019 132 291 7.0E-23 T 22-04-2016 JE55_RS04950 9fd37b11f59315c78c22de67b1a1d34b 309 Gene3D G3DSA:1.10.10.60 183 238 1.1E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS15790 c8eb49494f0a42df6b22cb3bd29d42d0 397 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 6.9E-37 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 JE55_RS15790 c8eb49494f0a42df6b22cb3bd29d42d0 397 PANTHER PTHR37480 2 397 7.5E-229 T 22-04-2016 JE55_RS15790 c8eb49494f0a42df6b22cb3bd29d42d0 397 Gene3D G3DSA:3.40.50.720 42 145 2.7E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS15790 c8eb49494f0a42df6b22cb3bd29d42d0 397 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 392 55.01 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 JE55_RS15790 c8eb49494f0a42df6b22cb3bd29d42d0 397 Pfam PF07055 Enoyl reductase FAD binding domain 323 386 1.8E-27 T 22-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 JE55_RS15790 c8eb49494f0a42df6b22cb3bd29d42d0 397 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 6.7E-106 T 22-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 Gene3D G3DSA:3.40.50.2000 252 413 2.9E-5 T 22-04-2016 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 216 7.4E-64 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 SUPERFAMILY SSF53756 66 290 6.09E-13 T 22-04-2016 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 SUPERFAMILY SSF53756 318 421 6.09E-13 T 22-04-2016 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 PANTHER PTHR23417 317 448 5.0E-97 T 22-04-2016 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 PANTHER PTHR23417 197 298 5.0E-97 T 22-04-2016 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 PANTHER PTHR23417 1 118 5.0E-97 T 22-04-2016 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 PANTHER PTHR23417 137 147 5.0E-97 T 22-04-2016 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 PANTHER PTHR23417:SF2 317 448 5.0E-97 T 22-04-2016 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 PANTHER PTHR23417:SF2 197 298 5.0E-97 T 22-04-2016 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 PANTHER PTHR23417:SF2 1 118 5.0E-97 T 22-04-2016 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 PANTHER PTHR23417:SF2 137 147 5.0E-97 T 22-04-2016 JE55_RS04315 3a3b6bd34db3b08f9a921ed0758eb2b2 461 Pfam PF00534 Glycosyl transferases group 1 313 414 4.1E-7 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS07385 beecd6ef08a78e5aa406b246d5b81bc6 219 SUPERFAMILY SSF50447 2 212 1.5E-76 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS07385 beecd6ef08a78e5aa406b246d5b81bc6 219 Pfam PF00297 Ribosomal protein L3 65 185 5.6E-14 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07385 beecd6ef08a78e5aa406b246d5b81bc6 219 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.656 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07385 beecd6ef08a78e5aa406b246d5b81bc6 219 PANTHER PTHR11229 4 211 3.0E-105 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07385 beecd6ef08a78e5aa406b246d5b81bc6 219 Gene3D G3DSA:2.40.30.10 161 212 5.0E-8 T 22-04-2016 JE55_RS07385 beecd6ef08a78e5aa406b246d5b81bc6 219 Gene3D G3DSA:2.40.30.10 4 33 5.0E-8 T 22-04-2016 JE55_RS07385 beecd6ef08a78e5aa406b246d5b81bc6 219 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site JE55_RS07385 beecd6ef08a78e5aa406b246d5b81bc6 219 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 206 8.9E-86 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07385 beecd6ef08a78e5aa406b246d5b81bc6 219 Gene3D G3DSA:4.10.960.10 86 160 4.0E-27 T 22-04-2016 JE55_RS14210 762d388869bf6f8a3d119425e3302ae4 98 Pfam PF03891 Domain of unknown function (DUF333) 31 75 2.9E-20 T 22-04-2016 IPR005590 Protein of unknown function DUF333 JE55_RS30445 4e7e7ece2de15ea89e420a5522a57ade 230 PANTHER PTHR10788 1 230 1.2E-89 T 22-04-2016 JE55_RS30445 4e7e7ece2de15ea89e420a5522a57ade 230 PANTHER PTHR10788:SF6 1 230 1.2E-89 T 22-04-2016 JE55_RS30445 4e7e7ece2de15ea89e420a5522a57ade 230 Gene3D G3DSA:3.40.50.2000 1 81 9.5E-15 T 22-04-2016 JE55_RS30445 4e7e7ece2de15ea89e420a5522a57ade 230 Gene3D G3DSA:3.40.50.2000 82 230 2.5E-59 T 22-04-2016 JE55_RS30445 4e7e7ece2de15ea89e420a5522a57ade 230 Pfam PF00982 Glycosyltransferase family 20 1 230 5.2E-69 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 JE55_RS30445 4e7e7ece2de15ea89e420a5522a57ade 230 SUPERFAMILY SSF53756 1 230 2.59E-68 T 22-04-2016 JE55_RS12575 2dce30421965aec5d26a3e7398b84ab0 406 PANTHER PTHR10108 43 300 1.8E-114 T 22-04-2016 JE55_RS12575 2dce30421965aec5d26a3e7398b84ab0 406 PANTHER PTHR10108 317 401 1.8E-114 T 22-04-2016 JE55_RS12575 2dce30421965aec5d26a3e7398b84ab0 406 PIRSF PIRSF003085 2 401 1.6E-130 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 JE55_RS12575 2dce30421965aec5d26a3e7398b84ab0 406 SUPERFAMILY SSF53335 118 384 8.2E-79 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS12575 2dce30421965aec5d26a3e7398b84ab0 406 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 380 5.3E-101 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS12575 2dce30421965aec5d26a3e7398b84ab0 406 Gene3D G3DSA:3.40.50.150 108 383 1.8E-98 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS12575 2dce30421965aec5d26a3e7398b84ab0 406 PANTHER PTHR10108:SF743 43 300 1.8E-114 T 22-04-2016 JE55_RS12575 2dce30421965aec5d26a3e7398b84ab0 406 PANTHER PTHR10108:SF743 317 401 1.8E-114 T 22-04-2016 JE55_RS02370 48a8acdc478b5deecd4b6b742d64b5cf 594 SUPERFAMILY SSF56645 99 303 1.34E-39 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS02370 48a8acdc478b5deecd4b6b742d64b5cf 594 PANTHER PTHR10909 42 470 1.8E-169 T 22-04-2016 JE55_RS02370 48a8acdc478b5deecd4b6b742d64b5cf 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 294 450 5.8E-35 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS02370 48a8acdc478b5deecd4b6b742d64b5cf 594 PANTHER PTHR10909:SF262 42 470 1.8E-169 T 22-04-2016 JE55_RS02370 48a8acdc478b5deecd4b6b742d64b5cf 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 180 283 4.5E-14 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS02370 48a8acdc478b5deecd4b6b742d64b5cf 594 Gene3D G3DSA:2.40.110.10 179 282 2.7E-20 T 22-04-2016 JE55_RS02370 48a8acdc478b5deecd4b6b742d64b5cf 594 Gene3D G3DSA:1.20.140.10 283 452 1.1E-40 T 22-04-2016 JE55_RS02370 48a8acdc478b5deecd4b6b742d64b5cf 594 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 409 428 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 JE55_RS02370 48a8acdc478b5deecd4b6b742d64b5cf 594 SUPERFAMILY SSF47203 292 452 3.87E-39 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS10225 e129ec46d2726104305f0328c81f0417 337 PANTHER PTHR30368 1 336 1.1E-155 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 JE55_RS10225 e129ec46d2726104305f0328c81f0417 337 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 18 332 3.6E-132 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 JE55_RS10225 e129ec46d2726104305f0328c81f0417 337 PANTHER PTHR30368:SF2 1 336 1.1E-155 T 22-04-2016 JE55_RS10225 e129ec46d2726104305f0328c81f0417 337 Gene3D G3DSA:3.40.190.10 27 168 7.9E-43 T 22-04-2016 JE55_RS10225 e129ec46d2726104305f0328c81f0417 337 Gene3D G3DSA:3.40.190.10 183 301 1.8E-26 T 22-04-2016 JE55_RS10225 e129ec46d2726104305f0328c81f0417 337 Pfam PF13531 Bacterial extracellular solute-binding protein 47 285 2.8E-43 T 22-04-2016 JE55_RS10225 e129ec46d2726104305f0328c81f0417 337 SUPERFAMILY SSF53850 27 332 6.44E-80 T 22-04-2016 JE55_RS14400 96ec6bcd2184b5f7167486db944a2a7d 159 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 2.1E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 JE55_RS14400 96ec6bcd2184b5f7167486db944a2a7d 159 SUPERFAMILY SSF56770 9 153 6.67E-67 T 22-04-2016 JE55_RS14400 96ec6bcd2184b5f7167486db944a2a7d 159 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.184 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 JE55_RS14400 96ec6bcd2184b5f7167486db944a2a7d 159 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 11 152 1.1E-77 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 JE55_RS14400 96ec6bcd2184b5f7167486db944a2a7d 159 Gene3D G3DSA:3.40.50.700 21 149 2.7E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 JE55_RS14400 96ec6bcd2184b5f7167486db944a2a7d 159 PANTHER PTHR11995 11 156 1.9E-121 T 22-04-2016 JE55_RS14400 96ec6bcd2184b5f7167486db944a2a7d 159 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 JE55_RS14400 96ec6bcd2184b5f7167486db944a2a7d 159 PANTHER PTHR11995:SF19 11 156 1.9E-121 T 22-04-2016 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 478 634 2.3E-32 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 PANTHER PTHR23115:SF184 456 803 1.8E-208 T 22-04-2016 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 PANTHER PTHR23115:SF184 828 973 1.8E-208 T 22-04-2016 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 SUPERFAMILY SSF52540 471 644 1.49E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 PANTHER PTHR23115 456 803 1.8E-208 T 22-04-2016 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 PANTHER PTHR23115 828 973 1.8E-208 T 22-04-2016 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 SUPERFAMILY SSF50447 648 730 1.02E-25 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 Gene3D G3DSA:3.40.50.10050 776 854 4.5E-27 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 398 448 1.5E-13 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 393 975 2.3E-264 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 SUPERFAMILY SSF52156 753 882 2.35E-38 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 SUPERFAMILY SSF50447 877 973 1.63E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 Gene3D G3DSA:2.40.30.10 647 740 2.2E-25 T 22-04-2016 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 Pfam PF00009 Elongation factor Tu GTP binding domain 480 635 1.6E-34 T 22-04-2016 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 61 99 5.1E-15 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 973 17.64 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 Gene3D G3DSA:3.30.56.50 3 51 6.7E-18 T 22-04-2016 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 Pfam PF11987 Translation-initiation factor 2 761 865 3.0E-38 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 Gene3D G3DSA:3.40.50.300 472 634 1.7E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 Gene3D G3DSA:2.40.30.10 877 973 3.3E-37 T 22-04-2016 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 ProSitePatterns PS01176 Initiation factor 2 signature. 926 948 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 JE55_RS16315 acbc5423ee9325a50ea2450b35c55b09 975 SUPERFAMILY SSF46955 4 51 3.48E-10 T 22-04-2016 IPR009061 Putative DNA-binding domain JE55_RS16110 534418b793ea767a06894e41e75d2cad 143 SUPERFAMILY SSF54637 5 136 8.51E-36 T 22-04-2016 IPR029069 HotDog domain JE55_RS16110 534418b793ea767a06894e41e75d2cad 143 Gene3D G3DSA:3.10.129.10 7 135 2.4E-42 T 22-04-2016 IPR029069 HotDog domain JE55_RS16110 534418b793ea767a06894e41e75d2cad 143 Pfam PF13279 Thioesterase-like superfamily 15 130 7.1E-18 T 22-04-2016 JE55_RS16110 534418b793ea767a06894e41e75d2cad 143 PANTHER PTHR31793 6 140 6.3E-33 T 22-04-2016 JE55_RS10695 4eb30a59051e4c80fb86d7aa8eb5b789 135 SMART SM00450 35 132 6.0E-19 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS10695 4eb30a59051e4c80fb86d7aa8eb5b789 135 SUPERFAMILY SSF52821 12 135 1.24E-31 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS10695 4eb30a59051e4c80fb86d7aa8eb5b789 135 PANTHER PTHR12231:SF138 39 135 2.8E-19 T 22-04-2016 JE55_RS10695 4eb30a59051e4c80fb86d7aa8eb5b789 135 PANTHER PTHR12231 39 135 2.8E-19 T 22-04-2016 JE55_RS10695 4eb30a59051e4c80fb86d7aa8eb5b789 135 Gene3D G3DSA:3.40.250.10 17 135 3.4E-29 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS10695 4eb30a59051e4c80fb86d7aa8eb5b789 135 Pfam PF00581 Rhodanese-like domain 36 128 4.0E-17 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 SMART SM00936 328 418 4.6E-31 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 106 117 4.97E-19 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 188 201 4.97E-19 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 161 178 4.97E-19 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 76 306 1.8E-78 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 PANTHER PTHR21581:SF3 75 435 3.7E-105 T 22-04-2016 JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 Gene3D G3DSA:2.60.410.10 328 418 2.1E-28 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 SUPERFAMILY SSF69189 328 420 1.14E-24 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 Gene3D G3DSA:3.40.710.10 72 327 6.6E-99 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 SUPERFAMILY SSF56601 54 326 4.75E-78 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 328 418 3.2E-21 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS10505 1e222cc0c5752bbf556447d3f7c18ede 437 PANTHER PTHR21581 75 435 3.7E-105 T 22-04-2016 JE55_RS04575 cc1e197b0a67e31c1678a3af30fbe577 264 PANTHER PTHR30269 2 262 2.9E-64 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 JE55_RS04575 cc1e197b0a67e31c1678a3af30fbe577 264 PANTHER PTHR30269:SF2 2 262 2.9E-64 T 22-04-2016 JE55_RS04575 cc1e197b0a67e31c1678a3af30fbe577 264 Pfam PF01925 Sulfite exporter TauE/SafE 12 261 8.4E-46 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 JE55_RS08770 9cee37e7df2d224c522a7c2892aef288 142 SMART SM00422 4 72 1.6E-14 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS08770 9cee37e7df2d224c522a7c2892aef288 142 Gene3D G3DSA:1.10.1660.10 4 58 6.0E-18 T 22-04-2016 JE55_RS08770 9cee37e7df2d224c522a7c2892aef288 142 Gene3D G3DSA:1.10.1660.10 59 123 3.3E-12 T 22-04-2016 JE55_RS08770 9cee37e7df2d224c522a7c2892aef288 142 Pfam PF13411 MerR HTH family regulatory protein 6 71 1.5E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS08770 9cee37e7df2d224c522a7c2892aef288 142 PANTHER PTHR30204:SF17 1 134 8.0E-41 T 22-04-2016 JE55_RS08770 9cee37e7df2d224c522a7c2892aef288 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 4.0E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS08770 9cee37e7df2d224c522a7c2892aef288 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 4.0E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS08770 9cee37e7df2d224c522a7c2892aef288 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 4.0E-5 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS08770 9cee37e7df2d224c522a7c2892aef288 142 PANTHER PTHR30204 1 134 8.0E-41 T 22-04-2016 JE55_RS08770 9cee37e7df2d224c522a7c2892aef288 142 SUPERFAMILY SSF46955 5 122 2.42E-24 T 22-04-2016 IPR009061 Putative DNA-binding domain JE55_RS05065 fa95daabbf246fd18342c457dd2ff4d1 218 SUPERFAMILY SSF52540 2 213 7.5E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05065 fa95daabbf246fd18342c457dd2ff4d1 218 PANTHER PTHR24220:SF117 3 207 3.4E-60 T 22-04-2016 JE55_RS05065 fa95daabbf246fd18342c457dd2ff4d1 218 Gene3D G3DSA:3.40.50.300 1 210 2.7E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05065 fa95daabbf246fd18342c457dd2ff4d1 218 Pfam PF00005 ABC transporter 21 151 2.6E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS05065 fa95daabbf246fd18342c457dd2ff4d1 218 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS05065 fa95daabbf246fd18342c457dd2ff4d1 218 PANTHER PTHR24220 3 207 3.4E-60 T 22-04-2016 JE55_RS05065 fa95daabbf246fd18342c457dd2ff4d1 218 SMART SM00382 30 201 1.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS00750 a50c28c4ead5d8e24d13e6045e670565 387 SUPERFAMILY SSF110738 8 383 7.19E-105 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JE55_RS00750 a50c28c4ead5d8e24d13e6045e670565 387 PIRSF PIRSF006078 7 386 1.0E-97 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JE55_RS00750 a50c28c4ead5d8e24d13e6045e670565 387 PANTHER PTHR21599:SF0 8 382 1.0E-95 T 22-04-2016 JE55_RS00750 a50c28c4ead5d8e24d13e6045e670565 387 PANTHER PTHR21599 8 382 1.0E-95 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JE55_RS00750 a50c28c4ead5d8e24d13e6045e670565 387 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 8 382 4.1E-101 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JE55_RS00750 a50c28c4ead5d8e24d13e6045e670565 387 Gene3D G3DSA:3.90.1510.10 47 284 1.2E-69 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 JE55_RS00750 a50c28c4ead5d8e24d13e6045e670565 387 Pfam PF02595 Glycerate kinase family 8 382 5.6E-119 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 JE55_RS12345 f188da03564525d81c13107b5505b884 121 Pfam PF04248 Domain of unknown function (DUF427) 18 111 3.1E-24 T 22-04-2016 IPR007361 Domain of unknown function DUF427 JE55_RS12345 f188da03564525d81c13107b5505b884 121 PANTHER PTHR34310 4 109 7.9E-28 T 22-04-2016 JE55_RS12345 f188da03564525d81c13107b5505b884 121 PANTHER PTHR34310:SF3 4 109 7.9E-28 T 22-04-2016 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 317 7.0E-130 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 SMART SM00840 347 402 9.0E-21 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 6.5E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 63 72 6.5E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 6.5E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 27 38 6.5E-28 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 PANTHER PTHR10890 4 465 1.5E-231 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 4 464 38.426 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 Gene3D G3DSA:1.20.120.640 313 395 9.6E-22 T 22-04-2016 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 Pfam PF09190 DALR domain 347 402 2.0E-16 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 SUPERFAMILY SSF52374 4 317 4.61E-97 T 22-04-2016 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 464 6.5E-167 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 Gene3D G3DSA:3.40.50.620 21 310 2.1E-108 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01680 7bd516bd63e1fb3be431fe55cb67640b 465 SUPERFAMILY SSF47323 321 463 1.12E-33 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS02200 97d7dba9b1cf2f5d1fb32a2f19555472 270 Pfam PF01614 Bacterial transcriptional regulator 130 245 2.3E-30 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal JE55_RS02200 97d7dba9b1cf2f5d1fb32a2f19555472 270 SMART SM00346 12 101 1.7E-23 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JE55_RS02200 97d7dba9b1cf2f5d1fb32a2f19555472 270 Pfam PF09339 IclR helix-turn-helix domain 15 64 3.9E-15 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JE55_RS02200 97d7dba9b1cf2f5d1fb32a2f19555472 270 Gene3D G3DSA:1.10.10.10 11 81 7.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02200 97d7dba9b1cf2f5d1fb32a2f19555472 270 SUPERFAMILY SSF55781 69 255 8.5E-44 T 22-04-2016 IPR029016 GAF domain-like JE55_RS02200 97d7dba9b1cf2f5d1fb32a2f19555472 270 Gene3D G3DSA:3.30.450.40 82 259 2.5E-50 T 22-04-2016 IPR029016 GAF domain-like JE55_RS02200 97d7dba9b1cf2f5d1fb32a2f19555472 270 PANTHER PTHR30136:SF7 8 264 4.8E-60 T 22-04-2016 JE55_RS02200 97d7dba9b1cf2f5d1fb32a2f19555472 270 SUPERFAMILY SSF46785 12 83 1.39E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02200 97d7dba9b1cf2f5d1fb32a2f19555472 270 PANTHER PTHR30136 8 264 4.8E-60 T 22-04-2016 JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 Gene3D G3DSA:3.40.50.720 2 200 1.5E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.6E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 1.6E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 1.6E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 4.4E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 4.4E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 4.4E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 4.4E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 4.4E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 SUPERFAMILY SSF51735 1 204 6.49E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 Pfam PF00106 short chain dehydrogenase 4 188 5.9E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 PANTHER PTHR24322 8 130 5.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 PANTHER PTHR24322 146 178 5.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17265 3fe51a190c41ebd7f7e52708a0ab107a 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 SUPERFAMILY SSF49363 41 151 1.44E-22 T 22-04-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 Gene3D G3DSA:3.60.21.10 155 286 2.8E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 Gene3D G3DSA:3.60.21.10 497 558 2.8E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 Gene3D G3DSA:3.60.21.10 322 462 2.8E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 53 136 2.4E-14 T 22-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 Gene3D G3DSA:2.60.40.380 52 152 4.2E-19 T 22-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 PANTHER PTHR22953 325 404 6.3E-69 T 22-04-2016 JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 PANTHER PTHR22953 43 288 6.3E-69 T 22-04-2016 JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 PANTHER PTHR22953 424 452 6.3E-69 T 22-04-2016 JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 Pfam PF00149 Calcineurin-like phosphoesterase 190 394 1.1E-12 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 SUPERFAMILY SSF56300 320 400 4.25E-46 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 SUPERFAMILY SSF56300 440 461 4.25E-46 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS11895 e004b18747f58547e51f8d4064a2c57a 560 SUPERFAMILY SSF56300 156 291 4.25E-46 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS00260 3aa50672cc3a6b3013da3daf022f43b3 518 Gene3D G3DSA:1.20.1250.20 270 432 3.5E-4 T 22-04-2016 JE55_RS00260 3aa50672cc3a6b3013da3daf022f43b3 518 Gene3D G3DSA:1.20.1250.20 492 510 3.5E-4 T 22-04-2016 JE55_RS00260 3aa50672cc3a6b3013da3daf022f43b3 518 SUPERFAMILY SSF103473 23 204 1.57E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS00260 3aa50672cc3a6b3013da3daf022f43b3 518 SUPERFAMILY SSF103473 491 513 1.57E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS00260 3aa50672cc3a6b3013da3daf022f43b3 518 SUPERFAMILY SSF103473 259 431 1.57E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS00260 3aa50672cc3a6b3013da3daf022f43b3 518 PANTHER PTHR23501 23 206 4.1E-39 T 22-04-2016 JE55_RS00260 3aa50672cc3a6b3013da3daf022f43b3 518 PANTHER PTHR23501 233 518 4.1E-39 T 22-04-2016 JE55_RS00260 3aa50672cc3a6b3013da3daf022f43b3 518 Pfam PF07690 Major Facilitator Superfamily 25 420 1.1E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS00260 3aa50672cc3a6b3013da3daf022f43b3 518 Gene3D G3DSA:1.20.1250.20 23 199 1.2E-19 T 22-04-2016 JE55_RS03415 c5947329b99c8bb2f0a2dfa00eff591b 202 Gene3D G3DSA:1.10.60.30 115 184 1.6E-28 T 22-04-2016 IPR023153 PSPTO4464-like domain JE55_RS03415 c5947329b99c8bb2f0a2dfa00eff591b 202 Pfam PF04751 Protein of unknown function (DUF615) 26 179 2.5E-52 T 22-04-2016 IPR006839 Ribosome-associated, YjgA JE55_RS03415 c5947329b99c8bb2f0a2dfa00eff591b 202 PANTHER PTHR38101 2 200 8.4E-50 T 22-04-2016 JE55_RS03415 c5947329b99c8bb2f0a2dfa00eff591b 202 SUPERFAMILY SSF158710 36 180 1.57E-46 T 22-04-2016 JE55_RS03415 c5947329b99c8bb2f0a2dfa00eff591b 202 PANTHER PTHR38101:SF1 2 200 8.4E-50 T 22-04-2016 JE55_RS03415 c5947329b99c8bb2f0a2dfa00eff591b 202 PIRSF PIRSF016183 11 187 6.9E-68 T 22-04-2016 IPR006839 Ribosome-associated, YjgA JE55_RS03415 c5947329b99c8bb2f0a2dfa00eff591b 202 Gene3D G3DSA:1.10.60.30 36 108 3.1E-29 T 22-04-2016 IPR023153 PSPTO4464-like domain JE55_RS07585 96a0f1f547993e47355d7f1414cc900f 228 Pfam PF00156 Phosphoribosyl transferase domain 65 160 5.2E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 JE55_RS07585 96a0f1f547993e47355d7f1414cc900f 228 SUPERFAMILY SSF53271 15 220 2.07E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS07585 96a0f1f547993e47355d7f1414cc900f 228 Gene3D G3DSA:3.40.50.2020 10 219 4.0E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS07585 96a0f1f547993e47355d7f1414cc900f 228 PANTHER PTHR19278 14 212 9.9E-36 T 22-04-2016 JE55_RS07585 96a0f1f547993e47355d7f1414cc900f 228 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 228 28.092 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS07585 96a0f1f547993e47355d7f1414cc900f 228 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 15 184 4.8E-32 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS07585 96a0f1f547993e47355d7f1414cc900f 228 PANTHER PTHR19278:SF9 14 212 9.9E-36 T 22-04-2016 JE55_RS01150 cde08243d2198c97f825dd8a5cf49fb9 167 Pfam PF03938 Outer membrane protein (OmpH-like) 4 159 2.1E-37 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 JE55_RS01150 cde08243d2198c97f825dd8a5cf49fb9 167 SUPERFAMILY SSF111384 21 159 7.72E-37 T 22-04-2016 IPR024930 Skp domain JE55_RS01150 cde08243d2198c97f825dd8a5cf49fb9 167 PIRSF PIRSF002094 1 163 2.6E-51 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 JE55_RS01150 cde08243d2198c97f825dd8a5cf49fb9 167 PANTHER PTHR35089:SF1 1 167 2.0E-34 T 22-04-2016 JE55_RS01150 cde08243d2198c97f825dd8a5cf49fb9 167 Gene3D G3DSA:3.30.910.20 95 159 2.9E-33 T 22-04-2016 JE55_RS01150 cde08243d2198c97f825dd8a5cf49fb9 167 Gene3D G3DSA:3.30.910.20 10 57 2.9E-33 T 22-04-2016 JE55_RS01150 cde08243d2198c97f825dd8a5cf49fb9 167 PANTHER PTHR35089 1 167 2.0E-34 T 22-04-2016 JE55_RS01150 cde08243d2198c97f825dd8a5cf49fb9 167 SMART SM00935 4 160 4.5E-57 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 JE55_RS19880 20a28b035a19c32d66c357916bb26ecb 108 Pfam PF09179 TilS substrate binding domain 70 107 4.6E-8 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 JE55_RS19880 20a28b035a19c32d66c357916bb26ecb 108 SUPERFAMILY SSF52402 2 54 2.3E-7 T 22-04-2016 JE55_RS19880 20a28b035a19c32d66c357916bb26ecb 108 SUPERFAMILY SSF82829 68 107 2.62E-8 T 22-04-2016 JE55_RS14170 ca8bcb585e8fe5e794cc0621ce8b41ce 324 SUPERFAMILY SSF50129 3 144 2.36E-38 T 22-04-2016 IPR011032 GroES-like JE55_RS14170 ca8bcb585e8fe5e794cc0621ce8b41ce 324 Gene3D G3DSA:3.90.180.10 3 145 3.1E-47 T 22-04-2016 IPR011032 GroES-like JE55_RS14170 ca8bcb585e8fe5e794cc0621ce8b41ce 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 130 1.2E-9 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JE55_RS14170 ca8bcb585e8fe5e794cc0621ce8b41ce 324 SMART SM00829 11 322 1.9E-45 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JE55_RS14170 ca8bcb585e8fe5e794cc0621ce8b41ce 324 Pfam PF00107 Zinc-binding dehydrogenase 151 255 6.4E-27 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JE55_RS14170 ca8bcb585e8fe5e794cc0621ce8b41ce 324 PANTHER PTHR11695 16 324 1.0E-136 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 JE55_RS14170 ca8bcb585e8fe5e794cc0621ce8b41ce 324 SUPERFAMILY SSF51735 113 268 1.16E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14170 ca8bcb585e8fe5e794cc0621ce8b41ce 324 PANTHER PTHR11695:SF578 16 324 1.0E-136 T 22-04-2016 JE55_RS14170 ca8bcb585e8fe5e794cc0621ce8b41ce 324 Gene3D G3DSA:3.40.50.720 146 252 7.5E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS09150 376692c29f6ebd7c9f51c8d903415328 291 Pfam PF00795 Carbon-nitrogen hydrolase 5 261 1.1E-52 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS09150 376692c29f6ebd7c9f51c8d903415328 291 Gene3D G3DSA:3.60.110.10 1 283 9.1E-98 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS09150 376692c29f6ebd7c9f51c8d903415328 291 PANTHER PTHR23088 1 285 3.1E-138 T 22-04-2016 JE55_RS09150 376692c29f6ebd7c9f51c8d903415328 291 SUPERFAMILY SSF56317 1 282 9.42E-87 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS09150 376692c29f6ebd7c9f51c8d903415328 291 PANTHER PTHR23088:SF11 1 285 3.1E-138 T 22-04-2016 JE55_RS09150 376692c29f6ebd7c9f51c8d903415328 291 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 5 282 2.2E-141 T 22-04-2016 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43|UniPathway: UPA00534 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 SUPERFAMILY SSF53738 3 152 1.53E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 1.2E-25 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 SUPERFAMILY SSF53738 158 258 2.04E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 Gene3D G3DSA:3.40.120.10 254 368 6.2E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 SUPERFAMILY SSF55957 369 464 8.37E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 PANTHER PTHR22573 1 463 6.2E-177 T 22-04-2016 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 SUPERFAMILY SSF53738 261 357 4.32E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 Gene3D G3DSA:3.40.120.10 3 165 8.5E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 2.6E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 2.6E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 2.6E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 102 116 2.6E-24 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 261 368 6.3E-22 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 Gene3D G3DSA:3.40.120.10 175 252 6.4E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 PANTHER PTHR22573:SF28 1 463 6.2E-177 T 22-04-2016 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 453 2.1E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 Gene3D G3DSA:3.30.310.50 372 462 5.0E-26 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS04330 c8af17502773402220d2a93c95b144af 464 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 6 140 3.8E-32 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 SUPERFAMILY SSF51735 1 156 1.89E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 Gene3D G3DSA:3.40.50.720 1 155 6.6E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 263 7.9E-73 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 263 26.023 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 159 263 3.3E-32 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 Gene3D G3DSA:1.10.3730.10 158 263 2.1E-33 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 PANTHER PTHR11645 1 267 1.3E-90 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 PANTHER PTHR11645:SF0 1 267 1.3E-90 T 22-04-2016 JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 95 2.1E-15 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 PIRSF PIRSF000193 1 266 2.9E-69 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 SUPERFAMILY SSF48179 158 266 3.57E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS05280 08747b33bf0621f74539fa430ee9d903 270 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 218 241 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 JE55_RS04815 51fd519765da02d2baba64e277d9b631 159 PANTHER PTHR30455:SF2 2 156 7.7E-68 T 22-04-2016 JE55_RS04815 51fd519765da02d2baba64e277d9b631 159 Pfam PF03477 ATP cone domain 51 136 4.6E-15 T 22-04-2016 IPR005144 ATP-cone domain JE55_RS04815 51fd519765da02d2baba64e277d9b631 159 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 87.09 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 JE55_RS04815 51fd519765da02d2baba64e277d9b631 159 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 1.7E-59 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 JE55_RS04815 51fd519765da02d2baba64e277d9b631 159 PANTHER PTHR30455 2 156 7.7E-68 T 22-04-2016 JE55_RS10845 3f1a51f70653e917c75a133f01591452 1072 PANTHER PTHR32294:SF4 7 1068 0.0 T 22-04-2016 JE55_RS10845 3f1a51f70653e917c75a133f01591452 1072 PANTHER PTHR32294 7 1068 0.0 T 22-04-2016 JE55_RS10845 3f1a51f70653e917c75a133f01591452 1072 Pfam PF14579 Helix-hairpin-helix motif 808 903 7.5E-23 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS10845 3f1a51f70653e917c75a133f01591452 1072 Gene3D G3DSA:3.20.20.140 18 82 1.0E-6 T 22-04-2016 JE55_RS10845 3f1a51f70653e917c75a133f01591452 1072 SUPERFAMILY SSF89550 18 79 2.16E-7 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 JE55_RS10845 3f1a51f70653e917c75a133f01591452 1072 Pfam PF02811 PHP domain 16 131 9.1E-14 T 22-04-2016 IPR004013 PHP domain GO:0003824 JE55_RS10845 3f1a51f70653e917c75a133f01591452 1072 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 301 734 4.7E-143 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS10845 3f1a51f70653e917c75a133f01591452 1072 SMART SM00481 12 79 1.4E-11 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 JE55_RS10845 3f1a51f70653e917c75a133f01591452 1072 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 12 906 1.1E-164 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS10845 3f1a51f70653e917c75a133f01591452 1072 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 11 1072 13.545 T 22-04-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS10845 3f1a51f70653e917c75a133f01591452 1072 Gene3D G3DSA:1.10.150.280 844 888 1.9E-5 T 22-04-2016 JE55_RS29430 772c446dcc6eb8434b8a05ae14c70ed9 266 PANTHER PTHR30203 2 257 5.3E-92 T 22-04-2016 JE55_RS29430 772c446dcc6eb8434b8a05ae14c70ed9 266 PANTHER PTHR30203:SF15 2 257 5.3E-92 T 22-04-2016 JE55_RS29430 772c446dcc6eb8434b8a05ae14c70ed9 266 Gene3D G3DSA:2.20.200.10 89 124 8.3E-10 T 22-04-2016 JE55_RS29430 772c446dcc6eb8434b8a05ae14c70ed9 266 Pfam PF02321 Outer membrane efflux protein 58 237 2.5E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS29430 772c446dcc6eb8434b8a05ae14c70ed9 266 SUPERFAMILY SSF56954 3 242 4.19E-64 T 22-04-2016 JE55_RS29430 772c446dcc6eb8434b8a05ae14c70ed9 266 Gene3D G3DSA:1.20.1600.10 126 240 2.9E-62 T 22-04-2016 JE55_RS29430 772c446dcc6eb8434b8a05ae14c70ed9 266 Gene3D G3DSA:1.20.1600.10 3 88 2.9E-62 T 22-04-2016 JE55_RS29430 772c446dcc6eb8434b8a05ae14c70ed9 266 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 2 239 2.9E-69 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 162 190 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PANTHER PTHR24322:SF382 31 159 1.3E-52 T 22-04-2016 JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PANTHER PTHR24322:SF382 175 207 1.3E-52 T 22-04-2016 JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 SUPERFAMILY SSF51735 26 267 2.84E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 33 267 4.6E-55 T 22-04-2016 JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 194 3.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 3.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 102 113 3.3E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 27 207 0.0011 T 22-04-2016 JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 Gene3D G3DSA:3.40.50.720 23 267 1.3E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PANTHER PTHR24322 31 159 1.3E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PANTHER PTHR24322 175 207 1.3E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 231 251 1.9E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 28 45 1.9E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 102 113 1.9E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 213 1.9E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 194 1.9E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05915 cd4f5a596b8269376f52822afaf345bf 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 165 1.9E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 Gene3D G3DSA:3.40.50.280 419 573 4.8E-63 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 Gene3D G3DSA:3.20.20.20 22 302 4.0E-116 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 TIGRFAM TIGR02082 metH: methionine synthase 4 875 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 PIRSF PIRSF000381 1 878 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 615 890 5.6E-118 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 Pfam PF00809 Pterin binding enzyme 26 264 4.3E-60 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 SUPERFAMILY SSF51717 22 296 1.24E-91 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 SUPERFAMILY SSF56507 580 905 9.81E-120 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 SUPERFAMILY SSF47644 315 406 3.53E-27 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 Pfam PF02607 B12 binding domain 322 399 2.4E-25 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 Gene3D G3DSA:3.10.196.10 635 905 4.7E-98 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 SUPERFAMILY SSF52242 416 572 7.06E-43 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 Gene3D G3DSA:1.10.1240.10 313 404 2.0E-37 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 SMART SM01018 320 407 3.7E-43 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain JE55_RS10390 793903459c4f4cee09ccabb7c93cf7a4 905 Pfam PF02310 B12 binding domain 422 515 1.4E-16 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 JE55_RS15090 e9274c20dacba5ed8540f533bc4c1a6d 105 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 99 2.9E-32 T 22-04-2016 IPR009662 Malonate decarboxylase delta subunit JE55_RS15090 e9274c20dacba5ed8540f533bc4c1a6d 105 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 104 53.987 T 22-04-2016 IPR009662 Malonate decarboxylase delta subunit JE55_RS15090 e9274c20dacba5ed8540f533bc4c1a6d 105 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 97 7.0E-50 T 22-04-2016 IPR009662 Malonate decarboxylase delta subunit JE55_RS15090 e9274c20dacba5ed8540f533bc4c1a6d 105 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 21 99 8.6E-22 T 22-04-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein JE55_RS01060 33743470001a6d5f56db8c13a6dabf5f 227 Pfam PF13360 PQQ-like domain 38 126 2.7E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat JE55_RS01060 33743470001a6d5f56db8c13a6dabf5f 227 Gene3D G3DSA:2.130.10.10 16 205 4.1E-19 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 JE55_RS01060 33743470001a6d5f56db8c13a6dabf5f 227 SUPERFAMILY SSF63825 15 206 7.32E-26 T 22-04-2016 JE55_RS06465 a1283304c94041028a8a9a9a5442fad4 261 SUPERFAMILY SSF51366 12 260 4.71E-84 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 JE55_RS06465 a1283304c94041028a8a9a9a5442fad4 261 PANTHER PTHR22854:SF2 1 260 4.5E-108 T 22-04-2016 JE55_RS06465 a1283304c94041028a8a9a9a5442fad4 261 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 256 1.3E-93 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 JE55_RS06465 a1283304c94041028a8a9a9a5442fad4 261 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 261 35.101 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 JE55_RS06465 a1283304c94041028a8a9a9a5442fad4 261 PANTHER PTHR22854 1 260 4.5E-108 T 22-04-2016 JE55_RS06465 a1283304c94041028a8a9a9a5442fad4 261 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 55 73 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 JE55_RS06465 a1283304c94041028a8a9a9a5442fad4 261 Gene3D G3DSA:3.20.20.70 1 260 1.4E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS02770 3765c6b97dec4cfc52c06c133b131e3f 390 PANTHER PTHR13847 1 390 1.4E-102 T 22-04-2016 JE55_RS02770 3765c6b97dec4cfc52c06c133b131e3f 390 SUPERFAMILY SSF51905 320 384 5.24E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02770 3765c6b97dec4cfc52c06c133b131e3f 390 SUPERFAMILY SSF51905 3 225 5.24E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02770 3765c6b97dec4cfc52c06c133b131e3f 390 Pfam PF01266 FAD dependent oxidoreductase 4 359 1.0E-56 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JE55_RS02770 3765c6b97dec4cfc52c06c133b131e3f 390 Gene3D G3DSA:3.50.50.60 2 82 3.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02770 3765c6b97dec4cfc52c06c133b131e3f 390 Gene3D G3DSA:3.50.50.60 146 224 3.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02770 3765c6b97dec4cfc52c06c133b131e3f 390 Gene3D G3DSA:3.50.50.60 320 378 3.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02770 3765c6b97dec4cfc52c06c133b131e3f 390 Gene3D G3DSA:3.30.9.10 225 317 3.0E-10 T 22-04-2016 JE55_RS02770 3765c6b97dec4cfc52c06c133b131e3f 390 Gene3D G3DSA:3.30.9.10 93 145 3.0E-10 T 22-04-2016 JE55_RS02770 3765c6b97dec4cfc52c06c133b131e3f 390 PANTHER PTHR13847:SF44 1 390 1.4E-102 T 22-04-2016 JE55_RS14035 e7df498b0eed17df90875489fbe10744 631 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 201 574 1.4E-26 T 22-04-2016 IPR006444 Phage major capsid protein, HK97 JE55_RS14035 e7df498b0eed17df90875489fbe10744 631 Pfam PF04586 Caudovirus prohead serine protease 63 165 1.0E-18 T 22-04-2016 IPR006433 Prohead protease JE55_RS14035 e7df498b0eed17df90875489fbe10744 631 SUPERFAMILY SSF50789 53 136 3.27E-5 T 22-04-2016 JE55_RS14035 e7df498b0eed17df90875489fbe10744 631 SUPERFAMILY SSF56563 335 623 8.63E-31 T 22-04-2016 JE55_RS14035 e7df498b0eed17df90875489fbe10744 631 Pfam PF05065 Phage capsid family 343 618 1.0E-21 T 22-04-2016 IPR024455 Phage capsid JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 SMART SM01274 27 160 1.8E-72 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 SUPERFAMILY SSF53659 438 763 5.35E-90 T 22-04-2016 JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 Gene3D G3DSA:3.40.50.10750 580 737 6.5E-54 T 22-04-2016 JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 Pfam PF12434 Malate dehydrogenase enzyme 12 25 3.8E-5 T 22-04-2016 IPR032683 Malate dehydrogenase enzyme, N-terminal JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 PANTHER PTHR23406 41 433 3.2E-154 T 22-04-2016 JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 Pfam PF01515 Phosphate acetyl/butaryl transferase 439 760 5.1E-98 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 SUPERFAMILY SSF53223 19 170 2.3E-49 T 22-04-2016 JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 SUPERFAMILY SSF51735 172 448 1.09E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 Gene3D G3DSA:3.40.50.10380 19 169 1.4E-48 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 SMART SM00919 172 409 3.5E-133 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 Pfam PF00390 Malic enzyme, N-terminal domain 29 158 5.2E-24 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 Gene3D G3DSA:3.40.50.720 170 457 1.4E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 PIRSF PIRSF036684 7 769 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 JE55_RS05885 eb07bf7235f5817feea133ceee23e206 769 Pfam PF03949 Malic enzyme, NAD binding domain 174 369 6.8E-21 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 SUPERFAMILY SSF118215 9 402 2.62E-119 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 PANTHER PTHR11958 2 416 9.8E-243 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 PANTHER PTHR11958:SF49 2 416 9.8E-243 T 22-04-2016 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 7.7E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 7.7E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 7.7E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 7.7E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 7.7E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 7.7E-28 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.717 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 Gene3D G3DSA:1.10.3860.10 6 406 6.6E-116 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS10595 ea749a45a720aff43e10f81718ec8847 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 3.2E-110 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS14540 b2eb9925f40bfe71ac96a9022a58916f 222 Pfam PF13470 PIN domain 12 187 1.1E-45 T 22-04-2016 IPR002716 PIN domain JE55_RS14540 b2eb9925f40bfe71ac96a9022a58916f 222 SUPERFAMILY SSF88723 12 100 6.17E-8 T 22-04-2016 IPR029060 PIN domain-like JE55_RS12820 a9a5de7b97378f9f23b04302cadc2965 536 SUPERFAMILY SSF49503 83 221 6.74E-31 T 22-04-2016 IPR008972 Cupredoxin JE55_RS12820 a9a5de7b97378f9f23b04302cadc2965 536 Gene3D G3DSA:2.60.40.420 80 220 5.6E-29 T 22-04-2016 IPR008972 Cupredoxin JE55_RS12820 a9a5de7b97378f9f23b04302cadc2965 536 Gene3D G3DSA:2.60.40.420 375 535 2.9E-35 T 22-04-2016 IPR008972 Cupredoxin JE55_RS12820 a9a5de7b97378f9f23b04302cadc2965 536 ProSitePatterns PS00080 Multicopper oxidases signature 2. 518 529 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 JE55_RS12820 a9a5de7b97378f9f23b04302cadc2965 536 PANTHER PTHR11709:SF2 77 536 1.7E-81 T 22-04-2016 JE55_RS12820 a9a5de7b97378f9f23b04302cadc2965 536 PANTHER PTHR11709 77 536 1.7E-81 T 22-04-2016 JE55_RS12820 a9a5de7b97378f9f23b04302cadc2965 536 Pfam PF07732 Multicopper oxidase 122 219 1.2E-26 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 JE55_RS12820 a9a5de7b97378f9f23b04302cadc2965 536 SUPERFAMILY SSF49503 419 535 1.83E-30 T 22-04-2016 IPR008972 Cupredoxin JE55_RS12820 a9a5de7b97378f9f23b04302cadc2965 536 Gene3D G3DSA:2.60.40.420 221 357 4.0E-24 T 22-04-2016 IPR008972 Cupredoxin JE55_RS12820 a9a5de7b97378f9f23b04302cadc2965 536 Pfam PF07731 Multicopper oxidase 427 535 1.1E-28 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 JE55_RS12820 a9a5de7b97378f9f23b04302cadc2965 536 SUPERFAMILY SSF49503 225 335 2.36E-16 T 22-04-2016 IPR008972 Cupredoxin JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 PANTHER PTHR30126 3 291 1.3E-102 T 22-04-2016 JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 Gene3D G3DSA:1.10.10.10 5 80 4.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 PANTHER PTHR30126:SF29 3 291 1.3E-102 T 22-04-2016 JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 Gene3D G3DSA:3.40.190.10 187 259 4.2E-9 T 22-04-2016 JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 Gene3D G3DSA:3.40.190.10 81 186 7.3E-10 T 22-04-2016 JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 SUPERFAMILY SSF46785 6 87 8.43E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 Pfam PF03466 LysR substrate binding domain 89 293 5.0E-23 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.6E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS13675 68891139b2db31fcfa8858844ee5373b 294 SUPERFAMILY SSF53850 90 293 6.15E-24 T 22-04-2016 JE55_RS02900 37a42c7290e73d51d456bb0b703c5073 243 Gene3D G3DSA:3.90.1720.10 132 241 1.2E-14 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS02900 37a42c7290e73d51d456bb0b703c5073 243 SUPERFAMILY SSF102712 130 143 2.09E-20 T 22-04-2016 JE55_RS02900 37a42c7290e73d51d456bb0b703c5073 243 SUPERFAMILY SSF102712 2 101 2.09E-20 T 22-04-2016 JE55_RS02900 37a42c7290e73d51d456bb0b703c5073 243 SMART SM00232 1 115 0.0093 T 22-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 JE55_RS02900 37a42c7290e73d51d456bb0b703c5073 243 SUPERFAMILY SSF54001 116 241 2.16E-15 T 22-04-2016 JE55_RS02900 37a42c7290e73d51d456bb0b703c5073 243 PANTHER PTHR34858:SF1 1 242 1.2E-48 T 22-04-2016 JE55_RS02900 37a42c7290e73d51d456bb0b703c5073 243 Gene3D G3DSA:3.40.140.10 1 131 3.4E-25 T 22-04-2016 JE55_RS02900 37a42c7290e73d51d456bb0b703c5073 243 PANTHER PTHR34858 1 242 1.2E-48 T 22-04-2016 JE55_RS02900 37a42c7290e73d51d456bb0b703c5073 243 Pfam PF00877 NlpC/P60 family 124 239 1.5E-16 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS02900 37a42c7290e73d51d456bb0b703c5073 243 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 97 7.1E-19 T 22-04-2016 IPR028090 JAB domain, prokaryotic JE55_RS02100 7d345201e089d72bd24a41fb31fa6810 262 Gene3D G3DSA:3.20.20.140 1 252 1.3E-68 T 22-04-2016 JE55_RS02100 7d345201e089d72bd24a41fb31fa6810 262 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 JE55_RS02100 7d345201e089d72bd24a41fb31fa6810 262 SUPERFAMILY SSF51556 2 252 6.28E-71 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS02100 7d345201e089d72bd24a41fb31fa6810 262 PIRSF PIRSF005902 1 256 4.6E-58 T 22-04-2016 IPR001130 TatD family GO:0016788 JE55_RS02100 7d345201e089d72bd24a41fb31fa6810 262 PANTHER PTHR10060 1 258 3.8E-64 T 22-04-2016 IPR001130 TatD family GO:0016788 JE55_RS02100 7d345201e089d72bd24a41fb31fa6810 262 Pfam PF01026 TatD related DNase 3 253 7.6E-58 T 22-04-2016 IPR001130 TatD family GO:0016788 JE55_RS04705 a8ed5624a697f375d36c1e5d83fd9c96 389 Gene3D G3DSA:1.20.1250.20 200 385 3.0E-19 T 22-04-2016 JE55_RS04705 a8ed5624a697f375d36c1e5d83fd9c96 389 SUPERFAMILY SSF103473 7 375 8.24E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS04705 a8ed5624a697f375d36c1e5d83fd9c96 389 PANTHER PTHR23521 3 379 2.3E-57 T 22-04-2016 JE55_RS04705 a8ed5624a697f375d36c1e5d83fd9c96 389 PANTHER PTHR23521:SF2 3 379 2.3E-57 T 22-04-2016 JE55_RS04705 a8ed5624a697f375d36c1e5d83fd9c96 389 Gene3D G3DSA:1.20.1250.20 7 188 2.0E-19 T 22-04-2016 JE55_RS04705 a8ed5624a697f375d36c1e5d83fd9c96 389 Pfam PF07690 Major Facilitator Superfamily 13 247 5.3E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS14750 eee0a502d46708ca4ec45f097064bde8 259 Gene3D G3DSA:3.40.50.300 4 241 2.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14750 eee0a502d46708ca4ec45f097064bde8 259 Pfam PF00005 ABC transporter 26 169 4.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS14750 eee0a502d46708ca4ec45f097064bde8 259 PANTHER PTHR24220 7 253 7.8E-109 T 22-04-2016 JE55_RS14750 eee0a502d46708ca4ec45f097064bde8 259 PANTHER PTHR24220:SF282 7 253 7.8E-109 T 22-04-2016 JE55_RS14750 eee0a502d46708ca4ec45f097064bde8 259 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS14750 eee0a502d46708ca4ec45f097064bde8 259 SMART SM00382 34 219 3.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS14750 eee0a502d46708ca4ec45f097064bde8 259 SUPERFAMILY SSF52540 5 243 1.69E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07785 36f9d97df3a7d4d49598606ec5f2492f 266 PANTHER PTHR34606 22 199 3.4E-42 T 22-04-2016 JE55_RS07785 36f9d97df3a7d4d49598606ec5f2492f 266 SMART SM00749 60 123 0.46 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria JE55_RS07785 36f9d97df3a7d4d49598606ec5f2492f 266 SMART SM00749 138 201 5.8E-5 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria JE55_RS07785 36f9d97df3a7d4d49598606ec5f2492f 266 Pfam PF04972 BON domain 133 198 1.6E-9 T 22-04-2016 IPR007055 BON domain JE55_RS07785 36f9d97df3a7d4d49598606ec5f2492f 266 Pfam PF04972 BON domain 58 124 6.8E-14 T 22-04-2016 IPR007055 BON domain JE55_RS07785 36f9d97df3a7d4d49598606ec5f2492f 266 PANTHER PTHR34606:SF4 22 199 3.4E-42 T 22-04-2016 JE55_RS08025 54c1822e8cfa3a4d14791dff444dfa32 506 PANTHER PTHR30288 23 499 1.1E-55 T 22-04-2016 JE55_RS08025 54c1822e8cfa3a4d14791dff444dfa32 506 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 447 469 8.4E-5 T 22-04-2016 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 JE55_RS08025 54c1822e8cfa3a4d14791dff444dfa32 506 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 268 291 8.4E-5 T 22-04-2016 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 JE55_RS08025 54c1822e8cfa3a4d14791dff444dfa32 506 PRINTS PR01608 Salmonella/Shigella invasin protein C signature 114 136 8.4E-5 T 22-04-2016 IPR005427 Salmonella/Shigella invasin protein C GO:0009405 JE55_RS08025 54c1822e8cfa3a4d14791dff444dfa32 506 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 253 484 4.3E-49 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 JE55_RS08025 54c1822e8cfa3a4d14791dff444dfa32 506 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 32 128 2.9E-14 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 JE55_RS08025 54c1822e8cfa3a4d14791dff444dfa32 506 Pfam PF07196 Flagellin hook IN motif 145 200 9.5E-10 T 22-04-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 JE55_RS08025 54c1822e8cfa3a4d14791dff444dfa32 506 PANTHER PTHR30288:SF0 23 499 1.1E-55 T 22-04-2016 JE55_RS00635 0e1adb07ed8b66231bd2ac5e220af18e 176 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 18.754 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 JE55_RS00635 0e1adb07ed8b66231bd2ac5e220af18e 176 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 1.7E-56 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 JE55_RS00635 0e1adb07ed8b66231bd2ac5e220af18e 176 Pfam PF04279 Intracellular septation protein A 1 175 4.9E-69 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 JE55_RS00635 0e1adb07ed8b66231bd2ac5e220af18e 176 PANTHER PTHR36917 1 176 7.8E-58 T 22-04-2016 JE55_RS00635 0e1adb07ed8b66231bd2ac5e220af18e 176 PANTHER PTHR36917:SF1 1 176 7.8E-58 T 22-04-2016 JE55_RS09255 5779a6b1de34889c6138cd131247f989 227 SUPERFAMILY SSF52172 1 122 2.85E-37 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS09255 5779a6b1de34889c6138cd131247f989 227 Pfam PF00072 Response regulator receiver domain 4 114 2.0E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS09255 5779a6b1de34889c6138cd131247f989 227 SMART SM00448 2 114 1.3E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS09255 5779a6b1de34889c6138cd131247f989 227 PANTHER PTHR32071:SF17 4 118 8.5E-37 T 22-04-2016 JE55_RS09255 5779a6b1de34889c6138cd131247f989 227 Gene3D G3DSA:1.10.10.60 169 216 2.5E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS09255 5779a6b1de34889c6138cd131247f989 227 SUPERFAMILY SSF46689 148 216 8.96E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS09255 5779a6b1de34889c6138cd131247f989 227 Pfam PF02954 Bacterial regulatory protein, Fis family 175 214 6.2E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS09255 5779a6b1de34889c6138cd131247f989 227 PANTHER PTHR32071 4 118 8.5E-37 T 22-04-2016 JE55_RS09255 5779a6b1de34889c6138cd131247f989 227 Gene3D G3DSA:3.40.50.2300 1 121 2.9E-35 T 22-04-2016 JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 Pfam PF00158 Sigma-54 interaction domain 137 303 7.4E-60 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 SMART SM00382 156 300 0.0018 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 SUPERFAMILY SSF46689 408 452 5.38E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 Gene3D G3DSA:1.10.10.60 359 452 1.3E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 SUPERFAMILY SSF52540 136 366 1.19E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 416 433 5.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 453 5.7E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 Gene3D G3DSA:3.40.50.300 134 308 1.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 Gene3D G3DSA:1.10.8.60 315 358 2.5E-6 T 22-04-2016 JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 Pfam PF02954 Bacterial regulatory protein, Fis family 412 450 6.8E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS16475 cc7d34a46a28bfc8f968496a4e283ae7 463 PANTHER PTHR32071 110 463 5.9E-109 T 22-04-2016 JE55_RS04000 524807a094408bfdb8081d6db91eb53d 238 SUPERFAMILY SSF89392 48 236 8.63E-44 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX JE55_RS04000 524807a094408bfdb8081d6db91eb53d 238 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 83 227 8.0E-38 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like JE55_RS04000 524807a094408bfdb8081d6db91eb53d 238 Gene3D G3DSA:2.50.20.10 47 236 2.8E-62 T 22-04-2016 JE55_RS04000 524807a094408bfdb8081d6db91eb53d 238 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 28 238 27.56 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 JE55_RS04000 524807a094408bfdb8081d6db91eb53d 238 PANTHER PTHR35869 16 236 2.1E-29 T 22-04-2016 JE55_RS14715 a8a3672ed326680ccd15a0406e41f0de 275 Gene3D G3DSA:1.10.10.10 15 90 2.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14715 a8a3672ed326680ccd15a0406e41f0de 275 PANTHER PTHR30136:SF4 1 238 2.1E-57 T 22-04-2016 JE55_RS14715 a8a3672ed326680ccd15a0406e41f0de 275 Pfam PF01614 Bacterial transcriptional regulator 143 263 3.6E-11 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal JE55_RS14715 a8a3672ed326680ccd15a0406e41f0de 275 SMART SM00346 21 111 2.4E-21 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JE55_RS14715 a8a3672ed326680ccd15a0406e41f0de 275 PANTHER PTHR30136 1 238 2.1E-57 T 22-04-2016 JE55_RS14715 a8a3672ed326680ccd15a0406e41f0de 275 SUPERFAMILY SSF55781 92 267 1.05E-37 T 22-04-2016 IPR029016 GAF domain-like JE55_RS14715 a8a3672ed326680ccd15a0406e41f0de 275 Pfam PF09339 IclR helix-turn-helix domain 23 72 2.4E-14 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JE55_RS14715 a8a3672ed326680ccd15a0406e41f0de 275 SUPERFAMILY SSF46785 21 95 2.81E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14715 a8a3672ed326680ccd15a0406e41f0de 275 Gene3D G3DSA:3.30.450.40 92 267 4.8E-39 T 22-04-2016 IPR029016 GAF domain-like JE55_RS15050 c66a51c1de2b2aeeeeafd7831dde7295 108 Gene3D G3DSA:2.160.20.50 83 106 3.6E-4 T 22-04-2016 IPR016133 Insect antifreeze protein JE55_RS17425 ca55dee17ea7d885744880ac0bf53f0a 375 PANTHER PTHR10314 49 311 2.3E-38 T 22-04-2016 JE55_RS17425 ca55dee17ea7d885744880ac0bf53f0a 375 SUPERFAMILY SSF53686 44 313 3.54E-52 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS17425 ca55dee17ea7d885744880ac0bf53f0a 375 Gene3D G3DSA:3.40.50.1100 45 141 3.7E-13 T 22-04-2016 JE55_RS17425 ca55dee17ea7d885744880ac0bf53f0a 375 Gene3D G3DSA:3.40.50.1100 142 309 2.1E-36 T 22-04-2016 JE55_RS17425 ca55dee17ea7d885744880ac0bf53f0a 375 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 45 294 1.3E-28 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS01385 5515ff60b6011ef02b94e1eb268c3d30 165 PANTHER PTHR33254:SF4 1 165 8.9E-76 T 22-04-2016 JE55_RS01385 5515ff60b6011ef02b94e1eb268c3d30 165 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 159 3.8E-64 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 JE55_RS01385 5515ff60b6011ef02b94e1eb268c3d30 165 PANTHER PTHR33254 1 165 8.9E-76 T 22-04-2016 JE55_RS01385 5515ff60b6011ef02b94e1eb268c3d30 165 Pfam PF03737 Demethylmenaquinone methyltransferase 5 158 5.5E-45 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein JE55_RS01385 5515ff60b6011ef02b94e1eb268c3d30 165 Gene3D G3DSA:3.50.30.40 3 164 6.6E-54 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein JE55_RS01385 5515ff60b6011ef02b94e1eb268c3d30 165 SUPERFAMILY SSF89562 2 163 5.89E-49 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 PIRSF PIRSF037532 1 778 3.1E-243 T 22-04-2016 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 SUPERFAMILY SSF47384 537 609 8.63E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 Pfam PF00672 HAMP domain 317 383 1.0E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 Gene3D G3DSA:3.30.450.20 395 530 3.3E-12 T 22-04-2016 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 PANTHER PTHR24423 399 473 8.1E-50 T 22-04-2016 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 PANTHER PTHR24423 489 755 8.1E-50 T 22-04-2016 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 SMART SM00091 401 468 6.8E-4 T 22-04-2016 IPR000014 PAS domain JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 Gene3D G3DSA:1.10.287.130 540 608 5.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 SUPERFAMILY SSF55785 393 471 5.06E-9 T 22-04-2016 IPR000014 PAS domain JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 Pfam PF00512 His Kinase A (phospho-acceptor) domain 541 608 8.7E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 Pfam PF08448 PAS fold 408 468 2.0E-5 T 22-04-2016 IPR013656 PAS fold-4 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 730 748 5.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 701 715 5.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 729 5.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 SUPERFAMILY SSF158472 337 384 8.24E-9 T 22-04-2016 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 SMART SM00387 651 774 1.5E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 Gene3D G3DSA:3.30.565.10 616 757 1.3E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 SUPERFAMILY SSF55874 602 758 2.62E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 651 758 1.7E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 SMART SM00304 335 387 4.0E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS09250 ef2420779e18953bf7bbc98df04f3685 802 SMART SM00388 540 612 5.3E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS07720 45d3984ef545209f044e71bc413ded26 202 ProDom PD109676 PLASMID MLL8758 Y4JH 4 198 1.0E-36 T 22-04-2016 IPR025873 Metal binding domain, predicted JE55_RS07720 45d3984ef545209f044e71bc413ded26 202 Pfam PF14455 Predicted metal binding domain 7 182 8.2E-55 T 22-04-2016 IPR025873 Metal binding domain, predicted JE55_RS07795 397dc05e00a9ff4c59de01f313cff357 160 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 46 154 1.6E-27 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 JE55_RS07795 397dc05e00a9ff4c59de01f313cff357 160 Gene3D G3DSA:3.40.1350.10 53 158 3.4E-31 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 JE55_RS07795 397dc05e00a9ff4c59de01f313cff357 160 PANTHER PTHR34039 41 158 6.9E-31 T 22-04-2016 JE55_RS07795 397dc05e00a9ff4c59de01f313cff357 160 PANTHER PTHR34039:SF1 41 158 6.9E-31 T 22-04-2016 JE55_RS07795 397dc05e00a9ff4c59de01f313cff357 160 Hamap MF_00048 UPF0102 protein YraN [yraN]. 45 155 20.751 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 JE55_RS07795 397dc05e00a9ff4c59de01f313cff357 160 Pfam PF02021 Uncharacterised protein family UPF0102 53 141 2.0E-22 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 JE55_RS07795 397dc05e00a9ff4c59de01f313cff357 160 SUPERFAMILY SSF52980 48 152 2.82E-15 T 22-04-2016 IPR011335 Restriction endonuclease type II-like JE55_RS01365 01db2fb21d4c0daf67e4cb90aba2a423 300 SUPERFAMILY SSF53850 91 296 3.8E-49 T 22-04-2016 JE55_RS01365 01db2fb21d4c0daf67e4cb90aba2a423 300 PANTHER PTHR30537:SF5 1 299 5.9E-114 T 22-04-2016 JE55_RS01365 01db2fb21d4c0daf67e4cb90aba2a423 300 Gene3D G3DSA:3.40.190.10 178 259 2.4E-4 T 22-04-2016 JE55_RS01365 01db2fb21d4c0daf67e4cb90aba2a423 300 Gene3D G3DSA:3.40.190.10 92 177 9.7E-26 T 22-04-2016 JE55_RS01365 01db2fb21d4c0daf67e4cb90aba2a423 300 PANTHER PTHR30537 1 299 5.9E-114 T 22-04-2016 JE55_RS01365 01db2fb21d4c0daf67e4cb90aba2a423 300 SUPERFAMILY SSF46785 3 111 5.39E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS01365 01db2fb21d4c0daf67e4cb90aba2a423 300 Gene3D G3DSA:1.10.10.10 3 85 1.5E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS01365 01db2fb21d4c0daf67e4cb90aba2a423 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.3E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS01365 01db2fb21d4c0daf67e4cb90aba2a423 300 Pfam PF03466 LysR substrate binding domain 90 291 6.1E-46 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS02795 7abcf685f1e1673c15d095bda4a1bd7f 458 SUPERFAMILY SSF53756 2 456 1.76E-142 T 22-04-2016 JE55_RS02795 7abcf685f1e1673c15d095bda4a1bd7f 458 Gene3D G3DSA:3.40.50.2000 242 441 5.4E-72 T 22-04-2016 JE55_RS02795 7abcf685f1e1673c15d095bda4a1bd7f 458 Gene3D G3DSA:3.40.50.2000 1 241 2.0E-65 T 22-04-2016 JE55_RS02795 7abcf685f1e1673c15d095bda4a1bd7f 458 Pfam PF00982 Glycosyltransferase family 20 20 456 9.7E-123 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 JE55_RS02795 7abcf685f1e1673c15d095bda4a1bd7f 458 PANTHER PTHR10788:SF6 1 456 9.7E-168 T 22-04-2016 JE55_RS02795 7abcf685f1e1673c15d095bda4a1bd7f 458 PANTHER PTHR10788 1 456 9.7E-168 T 22-04-2016 JE55_RS02795 7abcf685f1e1673c15d095bda4a1bd7f 458 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 456 4.4E-173 T 22-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 JE55_RS08150 e725bc92fdc3bee5adbfd06f4ef15e4e 82 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 17 82 1.1E-22 T 22-04-2016 IPR025528 BrnA antitoxin of type II toxin-antitoxin system JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 Gene3D G3DSA:1.10.150.120 87 175 1.0E-34 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 Gene3D G3DSA:3.30.465.10 257 370 2.3E-35 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 Gene3D G3DSA:3.30.390.50 382 482 2.8E-35 T 22-04-2016 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 Gene3D G3DSA:3.10.20.30 3 86 8.5E-25 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 381 481 1.7E-28 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 SMART SM01092 381 482 1.4E-33 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 SUPERFAMILY SSF47741 97 217 4.97E-32 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 209 370 4.9E-47 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 Gene3D G3DSA:3.30.43.10 209 256 2.1E-24 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 PANTHER PTHR11908 1 481 2.4E-119 T 22-04-2016 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 SUPERFAMILY SSF54292 18 90 1.67E-15 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 PIRSF PIRSF036557 2 495 2.7E-213 T 22-04-2016 IPR012175 Xanthine dehydrogenase, small subunit, bacteria JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 71 3.3E-4 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 SUPERFAMILY SSF55447 378 485 1.83E-32 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 SUPERFAMILY SSF56176 192 369 9.82E-52 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 5 482 1.4E-213 T 22-04-2016 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 JE55_RS04655 1c9200fb2d1dd6d56426ebff973d2b52 505 Pfam PF01799 [2Fe-2S] binding domain 85 167 3.2E-29 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 PANTHER PTHR30419 1 289 5.7E-98 T 22-04-2016 JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 SUPERFAMILY SSF46785 2 112 2.12E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 Gene3D G3DSA:1.10.10.10 3 89 3.2E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 Gene3D G3DSA:3.40.190.10 179 264 2.4E-23 T 22-04-2016 JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 Pfam PF03466 LysR substrate binding domain 89 292 1.3E-47 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.0E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 SUPERFAMILY SSF53850 90 294 4.85E-44 T 22-04-2016 JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 Gene3D G3DSA:3.40.190.10 91 178 9.3E-20 T 22-04-2016 JE55_RS16290 c97a382a4e6aa8bd2cb43a5fbbbe8a22 300 PANTHER PTHR30419:SF3 1 289 5.7E-98 T 22-04-2016 JE55_RS17240 b97ddadc8a96be934bda3c170a63b082 371 Pfam PF13458 Periplasmic binding protein 25 364 3.0E-54 T 22-04-2016 IPR028081 Leucine-binding protein domain JE55_RS17240 b97ddadc8a96be934bda3c170a63b082 371 Gene3D G3DSA:3.40.50.2300 25 225 7.9E-55 T 22-04-2016 JE55_RS17240 b97ddadc8a96be934bda3c170a63b082 371 PANTHER PTHR30483 8 367 2.8E-64 T 22-04-2016 JE55_RS17240 b97ddadc8a96be934bda3c170a63b082 371 SUPERFAMILY SSF53822 25 370 5.72E-83 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS17240 b97ddadc8a96be934bda3c170a63b082 371 PANTHER PTHR30483:SF20 8 367 2.8E-64 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JE55_RS04555 58b8470e177ece67c561c348ade3df8f 207 Pfam PF01810 LysE type translocator 19 205 1.5E-26 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS04555 58b8470e177ece67c561c348ade3df8f 207 PANTHER PTHR30086 1 207 4.8E-33 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS04555 58b8470e177ece67c561c348ade3df8f 207 PIRSF PIRSF006324 1 207 1.4E-40 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS02915 1e4a928a935098367f20908c3111a404 926 Pfam PF06791 Prophage tail length tape measure protein 36 231 1.5E-37 T 22-04-2016 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 PANTHER PTHR33121:SF13 456 784 1.3E-80 T 22-04-2016 JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 PANTHER PTHR33121:SF13 263 274 1.3E-80 T 22-04-2016 JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 PANTHER PTHR33121 456 784 1.3E-80 T 22-04-2016 JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 PANTHER PTHR33121 263 274 1.3E-80 T 22-04-2016 JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 Gene3D G3DSA:3.20.20.450 509 759 2.1E-95 T 22-04-2016 IPR001633 EAL domain JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 Pfam PF00990 Diguanylate cyclase, GGDEF domain 336 491 1.2E-40 T 22-04-2016 IPR000160 GGDEF domain JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 SMART SM00267 325 496 1.2E-47 T 22-04-2016 IPR000160 GGDEF domain JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 Gene3D G3DSA:3.30.450.20 118 184 5.6E-10 T 22-04-2016 JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 Pfam PF02743 Cache domain 114 282 2.8E-12 T 22-04-2016 IPR033479 Double Cache domain 1 JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 SUPERFAMILY SSF55073 341 497 6.28E-42 T 22-04-2016 IPR029787 Nucleotide cyclase JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 SUPERFAMILY SSF141868 511 759 1.96E-86 T 22-04-2016 IPR001633 EAL domain JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 SMART SM00052 506 752 1.8E-107 T 22-04-2016 IPR001633 EAL domain JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 Gene3D G3DSA:3.30.70.270 338 502 5.1E-48 T 22-04-2016 JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 334 494 3.7E-35 T 22-04-2016 IPR000160 GGDEF domain JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 Gene3D G3DSA:3.30.450.20 185 297 3.3E-6 T 22-04-2016 JE55_RS13715 156f3ee023039b8ea31ab031633f7e3c 786 Pfam PF00563 EAL domain 512 747 1.2E-69 T 22-04-2016 IPR001633 EAL domain JE55_RS03240 59eda901b8b9d2da9e25c63ad9c4fbff 370 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 43 54 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS03240 59eda901b8b9d2da9e25c63ad9c4fbff 370 SUPERFAMILY SSF102114 30 310 2.49E-73 T 22-04-2016 JE55_RS03240 59eda901b8b9d2da9e25c63ad9c4fbff 370 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 28 370 40.038 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS03240 59eda901b8b9d2da9e25c63ad9c4fbff 370 Pfam PF13394 4Fe-4S single cluster domain 44 137 3.6E-7 T 22-04-2016 JE55_RS03240 59eda901b8b9d2da9e25c63ad9c4fbff 370 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 28 370 6.4E-118 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS03240 59eda901b8b9d2da9e25c63ad9c4fbff 370 SMART SM00729 37 251 1.3E-10 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 JE55_RS03240 59eda901b8b9d2da9e25c63ad9c4fbff 370 Pfam PF04055 Radical SAM superfamily 41 210 1.0E-28 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS03240 59eda901b8b9d2da9e25c63ad9c4fbff 370 Pfam PF06463 Molybdenum Cofactor Synthesis C 218 344 2.9E-37 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS03240 59eda901b8b9d2da9e25c63ad9c4fbff 370 Gene3D G3DSA:3.20.20.70 29 333 7.2E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS03240 59eda901b8b9d2da9e25c63ad9c4fbff 370 PANTHER PTHR22960 30 316 2.3E-113 T 22-04-2016 JE55_RS03540 a11941f82557b549f1053fd6c6f1342d 307 SUPERFAMILY SSF52768 1 306 8.63E-104 T 22-04-2016 JE55_RS03540 a11941f82557b549f1053fd6c6f1342d 307 PANTHER PTHR10625 11 306 1.6E-93 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS03540 a11941f82557b549f1053fd6c6f1342d 307 Pfam PF00850 Histone deacetylase domain 20 304 9.5E-78 T 22-04-2016 IPR023801 Histone deacetylase domain JE55_RS03540 a11941f82557b549f1053fd6c6f1342d 307 PRINTS PR01270 Histone deacetylase superfamily signature 122 145 5.0E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS03540 a11941f82557b549f1053fd6c6f1342d 307 PRINTS PR01270 Histone deacetylase superfamily signature 156 171 5.0E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS03540 a11941f82557b549f1053fd6c6f1342d 307 PRINTS PR01270 Histone deacetylase superfamily signature 234 244 5.0E-17 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS03540 a11941f82557b549f1053fd6c6f1342d 307 Gene3D G3DSA:3.40.800.20 2 306 1.9E-103 T 22-04-2016 IPR023801 Histone deacetylase domain JE55_RS03540 a11941f82557b549f1053fd6c6f1342d 307 PANTHER PTHR10625:SF104 11 306 1.6E-93 T 22-04-2016 JE55_RS16815 11cccd47f77a6fc18c72cbb994688bf9 421 SUPERFAMILY SSF53300 251 332 2.45E-5 T 22-04-2016 IPR002035 von Willebrand factor, type A JE55_RS16815 11cccd47f77a6fc18c72cbb994688bf9 421 PANTHER PTHR30510 1 417 5.3E-156 T 22-04-2016 JE55_RS16815 11cccd47f77a6fc18c72cbb994688bf9 421 Pfam PF04285 Protein of unknown function (DUF444) 4 417 8.8E-179 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 JE55_RS16815 11cccd47f77a6fc18c72cbb994688bf9 421 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 420 37.537 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 PANTHER PTHR11692:SF2 1 521 0.0 T 22-04-2016 JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 Gene3D G3DSA:3.40.140.20 247 361 5.0E-49 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 SUPERFAMILY SSF53927 215 521 1.91E-126 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 Gene3D G3DSA:3.40.140.20 369 511 1.3E-56 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 PANTHER PTHR11692 1 521 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 Pfam PF01808 AICARFT/IMPCHase bienzyme 134 451 9.1E-121 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 PIRSF PIRSF000414 1 521 2.8E-219 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 Pfam PF02142 MGS-like domain 14 129 2.0E-30 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 521 1.4E-227 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 521 45.393 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 SUPERFAMILY SSF52335 2 193 3.92E-73 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 SMART SM00798 134 453 4.4E-207 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 Gene3D G3DSA:3.40.50.1380 1 187 1.5E-87 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS05550 38d4100699cf947648eb0e55861602fe 521 SMART SM00851 14 129 9.3E-66 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS15750 844852a37a104b38f26124bd3d7f990e 803 PANTHER PTHR30451 49 801 2.1E-230 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 JE55_RS15750 844852a37a104b38f26124bd3d7f990e 803 PANTHER PTHR30451:SF5 49 801 2.1E-230 T 22-04-2016 JE55_RS15750 844852a37a104b38f26124bd3d7f990e 803 Pfam PF00577 Outer membrane usher protein 243 698 3.5E-27 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 JE55_RS15750 844852a37a104b38f26124bd3d7f990e 803 Pfam PF13953 PapC C-terminal domain 726 785 7.3E-11 T 22-04-2016 IPR025949 PapC-like, C-terminal domain JE55_RS04540 71ed5e042df932e5ad0b3be546d5f83c 404 PANTHER PTHR11935:SF5 27 348 3.8E-95 T 22-04-2016 JE55_RS04540 71ed5e042df932e5ad0b3be546d5f83c 404 Pfam PF00753 Metallo-beta-lactamase superfamily 38 224 4.6E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS04540 71ed5e042df932e5ad0b3be546d5f83c 404 Gene3D G3DSA:3.60.15.10 29 255 9.0E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS04540 71ed5e042df932e5ad0b3be546d5f83c 404 PANTHER PTHR11935 27 348 3.8E-95 T 22-04-2016 JE55_RS04540 71ed5e042df932e5ad0b3be546d5f83c 404 SUPERFAMILY SSF56281 24 251 6.44E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS04540 71ed5e042df932e5ad0b3be546d5f83c 404 SMART SM00849 39 224 1.6E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS12130 98f46c6590c7b3d0b7ecb982aee96485 275 Gene3D G3DSA:3.30.420.10 96 253 1.4E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS12130 98f46c6590c7b3d0b7ecb982aee96485 275 SUPERFAMILY SSF53098 98 257 1.52E-40 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS12130 98f46c6590c7b3d0b7ecb982aee96485 275 PANTHER PTHR32552 39 258 1.7E-83 T 22-04-2016 JE55_RS12130 98f46c6590c7b3d0b7ecb982aee96485 275 PANTHER PTHR32552:SF26 39 258 1.7E-83 T 22-04-2016 JE55_RS12130 98f46c6590c7b3d0b7ecb982aee96485 275 Pfam PF13683 Integrase core domain 186 252 1.4E-29 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 JE55_RS12130 98f46c6590c7b3d0b7ecb982aee96485 275 Pfam PF13276 HTH-like domain 33 86 2.9E-11 T 22-04-2016 IPR025948 HTH-like domain JE55_RS12905 42f93f47bc5eeeb9446eeb6392b79388 294 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 29 292 5.5E-85 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 JE55_RS12905 42f93f47bc5eeeb9446eeb6392b79388 294 SUPERFAMILY SSF54675 22 126 2.51E-31 T 22-04-2016 JE55_RS12905 42f93f47bc5eeeb9446eeb6392b79388 294 Gene3D G3DSA:3.90.1170.20 23 147 1.4E-48 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 JE55_RS12905 42f93f47bc5eeeb9446eeb6392b79388 294 PIRSF PIRSF006250 20 294 7.0E-89 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD JE55_RS12905 42f93f47bc5eeeb9446eeb6392b79388 294 PANTHER PTHR32179 3 294 1.2E-110 T 22-04-2016 JE55_RS12905 42f93f47bc5eeeb9446eeb6392b79388 294 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 37 125 4.9E-24 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 JE55_RS12905 42f93f47bc5eeeb9446eeb6392b79388 294 Gene3D G3DSA:3.20.20.70 148 281 3.4E-52 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS12905 42f93f47bc5eeeb9446eeb6392b79388 294 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 127 291 4.2E-50 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 JE55_RS12905 42f93f47bc5eeeb9446eeb6392b79388 294 SUPERFAMILY SSF51690 127 292 3.73E-54 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 PRINTS PR00702 Acriflavin resistance protein family signature 163 184 1.3E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 PRINTS PR00702 Acriflavin resistance protein family signature 191 215 1.3E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 PRINTS PR00702 Acriflavin resistance protein family signature 416 430 1.3E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 PRINTS PR00702 Acriflavin resistance protein family signature 136 159 1.3E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 PRINTS PR00702 Acriflavin resistance protein family signature 269 292 1.3E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 PRINTS PR00702 Acriflavin resistance protein family signature 244 267 1.3E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 PRINTS PR00702 Acriflavin resistance protein family signature 349 366 1.3E-61 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 SUPERFAMILY SSF82714 1 71 4.84E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 PANTHER PTHR32063:SF21 1 536 1.2E-288 T 22-04-2016 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 Pfam PF00873 AcrB/AcrD/AcrF family 2 535 3.9E-157 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 PANTHER PTHR32063 1 536 1.2E-288 T 22-04-2016 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 Gene3D G3DSA:3.30.2090.10 1 72 2.6E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 SUPERFAMILY SSF82693 362 459 1.92E-16 T 22-04-2016 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 Gene3D G3DSA:3.30.70.1430 364 454 6.0E-10 T 22-04-2016 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 SUPERFAMILY SSF82866 96 297 1.22E-46 T 22-04-2016 JE55_RS31580 f6535c6f988fccd31f0b32605791bfac 536 Gene3D G3DSA:1.20.1640.10 91 306 4.6E-58 T 22-04-2016 JE55_RS04715 47a786d1c3f2b49aeed597f1ecbc4479 444 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 11 439 5.8E-200 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 JE55_RS04715 47a786d1c3f2b49aeed597f1ecbc4479 444 PANTHER PTHR11056 1 444 2.6E-252 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 JE55_RS04715 47a786d1c3f2b49aeed597f1ecbc4479 444 Pfam PF04209 homogentisate 1,2-dioxygenase 13 439 1.5E-203 T 22-04-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 JE55_RS04715 47a786d1c3f2b49aeed597f1ecbc4479 444 SUPERFAMILY SSF51182 12 443 2.45E-171 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS04715 47a786d1c3f2b49aeed597f1ecbc4479 444 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 12 441 71.662 T 22-04-2016 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|UniPathway: UPA00139 JE55_RS04715 47a786d1c3f2b49aeed597f1ecbc4479 444 Gene3D G3DSA:2.60.120.10 205 230 6.0E-67 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS04715 47a786d1c3f2b49aeed597f1ecbc4479 444 Gene3D G3DSA:2.60.120.10 291 409 6.0E-67 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS09630 fab7eb7d7c1d477c5fec2756a0d6a3e8 326 PANTHER PTHR10046:SF50 100 240 9.9E-19 T 22-04-2016 JE55_RS09630 fab7eb7d7c1d477c5fec2756a0d6a3e8 326 SMART SM00382 96 240 6.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS09630 fab7eb7d7c1d477c5fec2756a0d6a3e8 326 Gene3D G3DSA:3.40.50.300 65 258 1.4E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09630 fab7eb7d7c1d477c5fec2756a0d6a3e8 326 SUPERFAMILY SSF52540 81 313 1.7E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09630 fab7eb7d7c1d477c5fec2756a0d6a3e8 326 PANTHER PTHR10046 100 240 9.9E-19 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 JE55_RS09630 fab7eb7d7c1d477c5fec2756a0d6a3e8 326 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 100 236 1.7E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS24900 97fc480daa83a387f47dd69bbb065285 228 PRINTS PR00605 Class IC cytochrome C signature 169 191 8.0E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 JE55_RS24900 97fc480daa83a387f47dd69bbb065285 228 PRINTS PR00605 Class IC cytochrome C signature 121 132 8.0E-5 T 22-04-2016 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 JE55_RS24900 97fc480daa83a387f47dd69bbb065285 228 Pfam PF00034 Cytochrome c 113 191 2.7E-10 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS24900 97fc480daa83a387f47dd69bbb065285 228 PANTHER PTHR33751:SF3 98 228 2.3E-24 T 22-04-2016 JE55_RS24900 97fc480daa83a387f47dd69bbb065285 228 Gene3D G3DSA:1.10.760.10 114 227 2.7E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS24900 97fc480daa83a387f47dd69bbb065285 228 PANTHER PTHR33751 98 228 2.3E-24 T 22-04-2016 JE55_RS24900 97fc480daa83a387f47dd69bbb065285 228 SUPERFAMILY SSF46626 87 201 4.8E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS08840 cf8a5c86775b578785c08fcc1941b3bb 240 PANTHER PTHR24220:SF358 3 233 8.3E-75 T 22-04-2016 JE55_RS08840 cf8a5c86775b578785c08fcc1941b3bb 240 PANTHER PTHR24220 3 233 8.3E-75 T 22-04-2016 JE55_RS08840 cf8a5c86775b578785c08fcc1941b3bb 240 Pfam PF00005 ABC transporter 28 159 1.4E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS08840 cf8a5c86775b578785c08fcc1941b3bb 240 SMART SM00382 25 218 5.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS08840 cf8a5c86775b578785c08fcc1941b3bb 240 Gene3D G3DSA:3.40.50.300 1 228 1.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08840 cf8a5c86775b578785c08fcc1941b3bb 240 SUPERFAMILY SSF52540 1 232 1.84E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12850 b70a7825ea0e4305b438f39b78444def 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 130 180 3.4E-16 T 22-04-2016 IPR007136 Protein of unknown function DUF347 JE55_RS12850 b70a7825ea0e4305b438f39b78444def 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 65 114 4.0E-15 T 22-04-2016 IPR007136 Protein of unknown function DUF347 JE55_RS12850 b70a7825ea0e4305b438f39b78444def 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 185 239 7.4E-14 T 22-04-2016 IPR007136 Protein of unknown function DUF347 JE55_RS12850 b70a7825ea0e4305b438f39b78444def 260 Pfam PF03988 Repeat of Unknown Function (DUF347) 10 61 7.1E-16 T 22-04-2016 IPR007136 Protein of unknown function DUF347 JE55_RS11270 b94d86bc251265abaae2442b27af7d77 286 PANTHER PTHR32552 1 278 3.6E-66 T 22-04-2016 JE55_RS11270 b94d86bc251265abaae2442b27af7d77 286 Pfam PF13276 HTH-like domain 38 95 2.3E-10 T 22-04-2016 IPR025948 HTH-like domain JE55_RS11270 b94d86bc251265abaae2442b27af7d77 286 Gene3D G3DSA:3.30.420.10 110 270 1.5E-35 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS11270 b94d86bc251265abaae2442b27af7d77 286 Pfam PF00665 Integrase core domain 117 231 2.7E-28 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 JE55_RS11270 b94d86bc251265abaae2442b27af7d77 286 SUPERFAMILY SSF53098 109 274 5.61E-39 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS17220 b4815c567481f7ce2861460c6616117f 241 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 3 240 7.4E-93 T 22-04-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 JE55_RS17220 b4815c567481f7ce2861460c6616117f 241 PANTHER PTHR21091 1 207 1.9E-63 T 22-04-2016 JE55_RS17220 b4815c567481f7ce2861460c6616117f 241 Gene3D G3DSA:3.30.950.10 110 230 5.8E-39 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 JE55_RS17220 b4815c567481f7ce2861460c6616117f 241 Gene3D G3DSA:3.40.1010.10 2 109 1.2E-31 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 JE55_RS17220 b4815c567481f7ce2861460c6616117f 241 SUPERFAMILY SSF53790 2 229 7.2E-65 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS17220 b4815c567481f7ce2861460c6616117f 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 206 8.8E-45 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS17220 b4815c567481f7ce2861460c6616117f 241 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 6 20 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 JE55_RS17220 b4815c567481f7ce2861460c6616117f 241 PANTHER PTHR21091:SF17 1 207 1.9E-63 T 22-04-2016 JE55_RS08125 d848dbb283ff5937fe30b2e9872b8b72 273 PANTHER PTHR10992:SF885 1 268 6.1E-82 T 22-04-2016 JE55_RS08125 d848dbb283ff5937fe30b2e9872b8b72 273 SUPERFAMILY SSF53474 1 267 3.59E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS08125 d848dbb283ff5937fe30b2e9872b8b72 273 PANTHER PTHR10992 1 268 6.1E-82 T 22-04-2016 JE55_RS08125 d848dbb283ff5937fe30b2e9872b8b72 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 1.2E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS08125 d848dbb283ff5937fe30b2e9872b8b72 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 1.2E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS08125 d848dbb283ff5937fe30b2e9872b8b72 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 1.2E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS08125 d848dbb283ff5937fe30b2e9872b8b72 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.2E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS08125 d848dbb283ff5937fe30b2e9872b8b72 273 PRINTS PR00412 Epoxide hydrolase signature 243 265 1.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS08125 d848dbb283ff5937fe30b2e9872b8b72 273 PRINTS PR00412 Epoxide hydrolase signature 45 60 1.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS08125 d848dbb283ff5937fe30b2e9872b8b72 273 Pfam PF00561 alpha/beta hydrolase fold 22 131 6.1E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS08125 d848dbb283ff5937fe30b2e9872b8b72 273 Gene3D G3DSA:3.40.50.1820 2 267 2.3E-57 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS08855 9f12f7224e1a1485253892e852c4aa22 419 PANTHER PTHR30483 23 366 5.4E-19 T 22-04-2016 JE55_RS08855 9f12f7224e1a1485253892e852c4aa22 419 SUPERFAMILY SSF53822 45 397 2.49E-50 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS08855 9f12f7224e1a1485253892e852c4aa22 419 Gene3D G3DSA:3.40.50.2300 167 320 1.3E-6 T 22-04-2016 JE55_RS08855 9f12f7224e1a1485253892e852c4aa22 419 Gene3D G3DSA:3.40.50.2300 321 372 6.5E-30 T 22-04-2016 JE55_RS08855 9f12f7224e1a1485253892e852c4aa22 419 Gene3D G3DSA:3.40.50.2300 42 165 6.5E-30 T 22-04-2016 JE55_RS08855 9f12f7224e1a1485253892e852c4aa22 419 Pfam PF13458 Periplasmic binding protein 45 390 8.4E-54 T 22-04-2016 IPR028081 Leucine-binding protein domain JE55_RS31570 b8667a89a83fb17d02ef84d01a2128aa 184 PANTHER PTHR32063 2 184 7.3E-84 T 22-04-2016 JE55_RS31570 b8667a89a83fb17d02ef84d01a2128aa 184 Gene3D G3DSA:3.30.2090.10 133 183 5.3E-10 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS31570 b8667a89a83fb17d02ef84d01a2128aa 184 Pfam PF00873 AcrB/AcrD/AcrF family 2 183 1.5E-44 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31570 b8667a89a83fb17d02ef84d01a2128aa 184 Gene3D G3DSA:3.30.70.1430 2 80 1.0E-19 T 22-04-2016 JE55_RS31570 b8667a89a83fb17d02ef84d01a2128aa 184 SUPERFAMILY SSF82714 123 183 3.66E-9 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS31570 b8667a89a83fb17d02ef84d01a2128aa 184 PANTHER PTHR32063:SF34 2 184 7.3E-84 T 22-04-2016 JE55_RS31570 b8667a89a83fb17d02ef84d01a2128aa 184 Gene3D G3DSA:3.30.70.1320 81 132 3.7E-5 T 22-04-2016 JE55_RS31570 b8667a89a83fb17d02ef84d01a2128aa 184 SUPERFAMILY SSF82693 2 74 2.88E-14 T 22-04-2016 JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 Gene3D G3DSA:3.90.70.10 21 141 1.2E-23 T 22-04-2016 JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 Gene3D G3DSA:3.40.50.300 488 713 2.2E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 Pfam PF03412 Peptidase C39 family 15 142 5.3E-34 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 SUPERFAMILY SSF90123 164 450 9.94E-61 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 PANTHER PTHR24221:SF138 173 700 2.2E-144 T 22-04-2016 JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 ProSitePatterns PS00211 ABC transporters family signature. 626 640 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 Gene3D G3DSA:1.20.1560.10 167 463 8.7E-68 T 22-04-2016 JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 PANTHER PTHR24221 173 700 2.2E-144 T 22-04-2016 JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 Pfam PF00664 ABC transporter transmembrane region 173 435 4.5E-42 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 Pfam PF00005 ABC transporter 505 654 7.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 SMART SM00382 514 698 1.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS06710 e455bafa7c0a8e381d4121b9bd215c99 753 SUPERFAMILY SSF52540 485 701 3.86E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01065 931501ee3b0525713a1373ad02392ada 322 Pfam PF00892 EamA-like transporter family 3 137 2.4E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS01065 931501ee3b0525713a1373ad02392ada 322 SUPERFAMILY SSF103481 209 305 7.06E-6 T 22-04-2016 JE55_RS01065 931501ee3b0525713a1373ad02392ada 322 PANTHER PTHR12715:SF21 1 304 9.6E-77 T 22-04-2016 JE55_RS01065 931501ee3b0525713a1373ad02392ada 322 PANTHER PTHR12715 1 304 9.6E-77 T 22-04-2016 JE55_RS14375 5e89a6297794442cd6ad050af8347f28 339 PANTHER PTHR11695 15 333 9.3E-126 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 JE55_RS14375 5e89a6297794442cd6ad050af8347f28 339 Gene3D G3DSA:3.90.180.10 1 159 9.5E-39 T 22-04-2016 IPR011032 GroES-like JE55_RS14375 5e89a6297794442cd6ad050af8347f28 339 Pfam PF00107 Zinc-binding dehydrogenase 161 286 9.1E-32 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JE55_RS14375 5e89a6297794442cd6ad050af8347f28 339 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 334 6.0E-143 T 22-04-2016 IPR014189 Quinone oxidoreductase PIG3 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- JE55_RS14375 5e89a6297794442cd6ad050af8347f28 339 SMART SM00829 10 333 4.3E-38 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JE55_RS14375 5e89a6297794442cd6ad050af8347f28 339 SUPERFAMILY SSF51735 116 297 4.05E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14375 5e89a6297794442cd6ad050af8347f28 339 SUPERFAMILY SSF50129 1 145 3.5E-36 T 22-04-2016 IPR011032 GroES-like JE55_RS14375 5e89a6297794442cd6ad050af8347f28 339 PANTHER PTHR11695:SF610 15 333 9.3E-126 T 22-04-2016 JE55_RS14375 5e89a6297794442cd6ad050af8347f28 339 Gene3D G3DSA:3.40.50.720 160 272 1.3E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10290 fe9f86f835c56800131b24ab8d635310 336 TIGRFAM TIGR00433 bioB: biotin synthase 31 326 4.2E-125 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 JE55_RS10290 fe9f86f835c56800131b24ab8d635310 336 Pfam PF04055 Radical SAM superfamily 66 218 5.5E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS10290 fe9f86f835c56800131b24ab8d635310 336 PANTHER PTHR22976:SF19 21 326 3.2E-158 T 22-04-2016 JE55_RS10290 fe9f86f835c56800131b24ab8d635310 336 SMART SM00729 59 271 6.0E-38 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 JE55_RS10290 fe9f86f835c56800131b24ab8d635310 336 PIRSF PIRSF001619 4 335 1.1E-134 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 JE55_RS10290 fe9f86f835c56800131b24ab8d635310 336 SUPERFAMILY SSF102114 22 327 2.22E-92 T 22-04-2016 JE55_RS10290 fe9f86f835c56800131b24ab8d635310 336 PANTHER PTHR22976 21 326 3.2E-158 T 22-04-2016 JE55_RS10290 fe9f86f835c56800131b24ab8d635310 336 Gene3D G3DSA:3.20.20.70 23 328 3.6E-103 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS10290 fe9f86f835c56800131b24ab8d635310 336 SMART SM00876 236 328 1.0E-47 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 JE55_RS10290 fe9f86f835c56800131b24ab8d635310 336 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 236 326 3.2E-18 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 JE55_RS10290 fe9f86f835c56800131b24ab8d635310 336 Hamap MF_01694 Biotin synthase [bioB]. 21 329 42.417 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 JE55_RS10135 e58228f9465207d9165614ac9a46dbf0 136 PRINTS PR00502 NUDIX hydrolase family signature 35 49 8.1E-5 T 22-04-2016 IPR020476 NUDIX hydrolase JE55_RS10135 e58228f9465207d9165614ac9a46dbf0 136 PRINTS PR00502 NUDIX hydrolase family signature 49 64 8.1E-5 T 22-04-2016 IPR020476 NUDIX hydrolase JE55_RS10135 e58228f9465207d9165614ac9a46dbf0 136 Gene3D G3DSA:3.90.79.10 3 131 3.9E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS10135 e58228f9465207d9165614ac9a46dbf0 136 PANTHER PTHR22769 7 132 3.1E-25 T 22-04-2016 JE55_RS10135 e58228f9465207d9165614ac9a46dbf0 136 Pfam PF00293 NUDIX domain 11 124 8.5E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 JE55_RS10135 e58228f9465207d9165614ac9a46dbf0 136 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JE55_RS10135 e58228f9465207d9165614ac9a46dbf0 136 SUPERFAMILY SSF55811 3 132 5.28E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS30635 7b84e4fef3808b5595a516864ad133a9 474 Gene3D G3DSA:3.30.70.270 133 297 2.0E-48 T 22-04-2016 JE55_RS30635 7b84e4fef3808b5595a516864ad133a9 474 SMART SM00267 120 291 1.2E-47 T 22-04-2016 IPR000160 GGDEF domain JE55_RS30635 7b84e4fef3808b5595a516864ad133a9 474 Gene3D G3DSA:3.20.20.450 304 473 3.0E-65 T 22-04-2016 IPR001633 EAL domain JE55_RS30635 7b84e4fef3808b5595a516864ad133a9 474 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 129 289 1.5E-35 T 22-04-2016 IPR000160 GGDEF domain JE55_RS30635 7b84e4fef3808b5595a516864ad133a9 474 SMART SM00052 301 474 3.0E-44 T 22-04-2016 IPR001633 EAL domain JE55_RS30635 7b84e4fef3808b5595a516864ad133a9 474 PANTHER PTHR10799:SF774 56 401 4.5E-78 T 22-04-2016 JE55_RS30635 7b84e4fef3808b5595a516864ad133a9 474 Pfam PF00563 EAL domain 307 473 2.0E-46 T 22-04-2016 IPR001633 EAL domain JE55_RS30635 7b84e4fef3808b5595a516864ad133a9 474 SUPERFAMILY SSF55073 136 292 2.49E-42 T 22-04-2016 IPR029787 Nucleotide cyclase JE55_RS30635 7b84e4fef3808b5595a516864ad133a9 474 Pfam PF00990 Diguanylate cyclase, GGDEF domain 131 286 4.8E-41 T 22-04-2016 IPR000160 GGDEF domain JE55_RS30635 7b84e4fef3808b5595a516864ad133a9 474 SUPERFAMILY SSF141868 306 473 6.02E-57 T 22-04-2016 IPR001633 EAL domain JE55_RS30635 7b84e4fef3808b5595a516864ad133a9 474 PANTHER PTHR10799 56 401 4.5E-78 T 22-04-2016 JE55_RS09835 02a5aa25a0e5cbe23c29e6b0e4b98a65 176 PANTHER PTHR33567 1 176 5.5E-33 T 22-04-2016 JE55_RS09835 02a5aa25a0e5cbe23c29e6b0e4b98a65 176 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 18 32 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site JE55_RS09835 02a5aa25a0e5cbe23c29e6b0e4b98a65 176 Pfam PF02417 Chromate transporter 8 169 4.0E-34 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 JE55_RS17725 259cfed56587a2f500dec7452c8709ea 102 SMART SM00528 53 92 8.7E-6 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 JE55_RS17725 259cfed56587a2f500dec7452c8709ea 102 Gene3D G3DSA:4.10.430.10 56 83 1.3E-5 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 JE55_RS17725 259cfed56587a2f500dec7452c8709ea 102 Pfam PF00816 H-NS histone family 8 84 1.1E-17 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 JE55_RS17725 259cfed56587a2f500dec7452c8709ea 102 SUPERFAMILY SSF81273 56 92 3.06E-8 T 22-04-2016 JE55_RS13350 2df872434f838a49ea14235854ee5e0e 251 Pfam PF08241 Methyltransferase domain 46 143 1.2E-25 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 JE55_RS13350 2df872434f838a49ea14235854ee5e0e 251 PANTHER PTHR10108:SF835 5 247 1.3E-66 T 22-04-2016 JE55_RS13350 2df872434f838a49ea14235854ee5e0e 251 SUPERFAMILY SSF53335 10 242 3.53E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS13350 2df872434f838a49ea14235854ee5e0e 251 Gene3D G3DSA:3.40.50.150 7 247 2.0E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS13350 2df872434f838a49ea14235854ee5e0e 251 PANTHER PTHR10108 5 247 1.3E-66 T 22-04-2016 JE55_RS12615 e242652695e0706d75219bc2169cfef5 409 Pfam PF08331 Domain of unknown function (DUF1730) 85 179 3.1E-20 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS12615 e242652695e0706d75219bc2169cfef5 409 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 241 252 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS12615 e242652695e0706d75219bc2169cfef5 409 PANTHER PTHR30002 25 108 4.6E-147 T 22-04-2016 JE55_RS12615 e242652695e0706d75219bc2169cfef5 409 PANTHER PTHR30002 125 407 4.6E-147 T 22-04-2016 JE55_RS12615 e242652695e0706d75219bc2169cfef5 409 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 37 407 9.2E-131 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS12615 e242652695e0706d75219bc2169cfef5 409 PANTHER PTHR30002:SF4 25 108 4.6E-147 T 22-04-2016 JE55_RS12615 e242652695e0706d75219bc2169cfef5 409 PANTHER PTHR30002:SF4 125 407 4.6E-147 T 22-04-2016 JE55_RS12615 e242652695e0706d75219bc2169cfef5 409 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 30 363 49.06 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS12615 e242652695e0706d75219bc2169cfef5 409 SUPERFAMILY SSF46548 180 304 2.25E-15 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 JE55_RS12615 e242652695e0706d75219bc2169cfef5 409 Pfam PF13484 4Fe-4S double cluster binding domain 240 304 6.0E-20 T 22-04-2016 JE55_RS12615 e242652695e0706d75219bc2169cfef5 409 Gene3D G3DSA:3.30.70.20 234 307 2.8E-6 T 22-04-2016 JE55_RS14330 5809db02a85694dcdfba2a7a0373e65b 290 PANTHER PTHR15362 47 179 2.8E-32 T 22-04-2016 JE55_RS14330 5809db02a85694dcdfba2a7a0373e65b 290 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 59 220 7.6E-34 T 22-04-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 JE55_RS14330 5809db02a85694dcdfba2a7a0373e65b 290 Pfam PF01066 CDP-alcohol phosphatidyltransferase 52 115 2.3E-14 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JE55_RS14330 5809db02a85694dcdfba2a7a0373e65b 290 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 93 115 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 JE55_RS07635 963ce91f37c6133b20ef6124fc4a01a6 222 PANTHER PTHR30086:SF4 1 221 3.4E-51 T 22-04-2016 JE55_RS07635 963ce91f37c6133b20ef6124fc4a01a6 222 Pfam PF01810 LysE type translocator 15 218 6.7E-37 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS07635 963ce91f37c6133b20ef6124fc4a01a6 222 PIRSF PIRSF006324 1 222 1.7E-80 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS07635 963ce91f37c6133b20ef6124fc4a01a6 222 PANTHER PTHR30086 1 221 3.4E-51 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS16165 b8ceedc0e0fa21e3fe0f6de2b845db2c 301 PANTHER PTHR10992 26 296 8.6E-24 T 22-04-2016 JE55_RS16165 b8ceedc0e0fa21e3fe0f6de2b845db2c 301 SUPERFAMILY SSF53474 25 286 3.1E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS16165 b8ceedc0e0fa21e3fe0f6de2b845db2c 301 PANTHER PTHR10992:SF771 26 296 8.6E-24 T 22-04-2016 JE55_RS16165 b8ceedc0e0fa21e3fe0f6de2b845db2c 301 Gene3D G3DSA:3.40.50.1820 25 293 5.4E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS16165 b8ceedc0e0fa21e3fe0f6de2b845db2c 301 Pfam PF12697 Alpha/beta hydrolase family 41 286 6.0E-18 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS10715 c78dfd63b5079b8b78f6ef292a1eb9d7 177 SUPERFAMILY SSF52949 7 176 1.85E-60 T 22-04-2016 JE55_RS10715 c78dfd63b5079b8b78f6ef292a1eb9d7 177 Gene3D G3DSA:3.40.220.10 11 174 1.3E-63 T 22-04-2016 JE55_RS10715 c78dfd63b5079b8b78f6ef292a1eb9d7 177 PANTHER PTHR11106 15 177 1.9E-76 T 22-04-2016 JE55_RS10715 c78dfd63b5079b8b78f6ef292a1eb9d7 177 Pfam PF01661 Macro domain 25 137 1.2E-43 T 22-04-2016 IPR002589 Macro domain JE55_RS10715 c78dfd63b5079b8b78f6ef292a1eb9d7 177 SMART SM00506 8 137 7.3E-42 T 22-04-2016 IPR002589 Macro domain JE55_RS14285 ebb1c38c6e0f7be3d05f2e11d527d02e 312 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 59 271 5.5E-10 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type JE55_RS14285 ebb1c38c6e0f7be3d05f2e11d527d02e 312 Gene3D G3DSA:3.60.21.10 240 292 2.2E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS14285 ebb1c38c6e0f7be3d05f2e11d527d02e 312 Gene3D G3DSA:3.60.21.10 57 199 2.2E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS14285 ebb1c38c6e0f7be3d05f2e11d527d02e 312 SUPERFAMILY SSF56300 57 174 5.78E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS14285 ebb1c38c6e0f7be3d05f2e11d527d02e 312 SUPERFAMILY SSF56300 233 295 5.78E-32 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS14285 ebb1c38c6e0f7be3d05f2e11d527d02e 312 PANTHER PTHR34990:SF2 43 311 1.4E-121 T 22-04-2016 JE55_RS14285 ebb1c38c6e0f7be3d05f2e11d527d02e 312 PANTHER PTHR34990 43 311 1.4E-121 T 22-04-2016 JE55_RS12320 86e0855510edd080b78b19dbfac69fb3 220 SMART SM00862 145 216 2.0E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS12320 86e0855510edd080b78b19dbfac69fb3 220 SMART SM00448 1 112 1.7E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS12320 86e0855510edd080b78b19dbfac69fb3 220 Pfam PF00072 Response regulator receiver domain 3 112 4.8E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS12320 86e0855510edd080b78b19dbfac69fb3 220 PANTHER PTHR26402 1 216 3.9E-103 T 22-04-2016 JE55_RS12320 86e0855510edd080b78b19dbfac69fb3 220 SUPERFAMILY SSF52172 1 176 8.82E-42 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS12320 86e0855510edd080b78b19dbfac69fb3 220 Gene3D G3DSA:3.40.50.2300 1 122 1.7E-40 T 22-04-2016 JE55_RS12320 86e0855510edd080b78b19dbfac69fb3 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 215 4.0E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS12320 86e0855510edd080b78b19dbfac69fb3 220 PANTHER PTHR26402:SF279 1 216 3.9E-103 T 22-04-2016 JE55_RS12320 86e0855510edd080b78b19dbfac69fb3 220 Gene3D G3DSA:1.10.10.10 123 217 7.9E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14895 a3919652c0568cef4abd33311d9d475b 342 SUPERFAMILY SSF52540 8 246 5.09E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14895 a3919652c0568cef4abd33311d9d475b 342 Pfam PF08402 TOBE domain 272 341 2.3E-8 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 JE55_RS14895 a3919652c0568cef4abd33311d9d475b 342 PANTHER PTHR24220:SF150 9 251 5.5E-110 T 22-04-2016 JE55_RS14895 a3919652c0568cef4abd33311d9d475b 342 Pfam PF00005 ABC transporter 24 166 3.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS14895 a3919652c0568cef4abd33311d9d475b 342 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS14895 a3919652c0568cef4abd33311d9d475b 342 SMART SM00382 32 216 6.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS14895 a3919652c0568cef4abd33311d9d475b 342 PANTHER PTHR24220 9 251 5.5E-110 T 22-04-2016 JE55_RS14895 a3919652c0568cef4abd33311d9d475b 342 SUPERFAMILY SSF50331 242 340 2.08E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS14895 a3919652c0568cef4abd33311d9d475b 342 Gene3D G3DSA:3.40.50.300 8 239 2.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14895 a3919652c0568cef4abd33311d9d475b 342 Gene3D G3DSA:2.40.50.140 273 333 3.0E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS08280 9b050733ec48bcca5f28c6e100c72c3e 465 Gene3D G3DSA:3.20.20.70 142 447 5.3E-168 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS08280 9b050733ec48bcca5f28c6e100c72c3e 465 PANTHER PTHR39329:SF1 1 460 1.2E-289 T 22-04-2016 JE55_RS08280 9b050733ec48bcca5f28c6e100c72c3e 465 PANTHER PTHR39329 1 460 1.2E-289 T 22-04-2016 JE55_RS08280 9b050733ec48bcca5f28c6e100c72c3e 465 Gene3D G3DSA:2.30.170.30 1 52 3.1E-27 T 22-04-2016 JE55_RS08280 9b050733ec48bcca5f28c6e100c72c3e 465 PIRSF PIRSF018788 1 458 4.1E-248 T 22-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 JE55_RS08280 9b050733ec48bcca5f28c6e100c72c3e 465 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 445 8.5E-225 T 22-04-2016 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 JE55_RS08280 9b050733ec48bcca5f28c6e100c72c3e 465 Gene3D G3DSA:1.10.220.70 55 140 1.8E-40 T 22-04-2016 JE55_RS14520 1c2f50b01fdf09a5dd221b7fe1a4a389 237 SUPERFAMILY SSF53254 9 208 1.44E-37 T 22-04-2016 IPR029033 Histidine phosphatase superfamily JE55_RS14520 1c2f50b01fdf09a5dd221b7fe1a4a389 237 PANTHER PTHR23029 3 170 1.4E-25 T 22-04-2016 JE55_RS14520 1c2f50b01fdf09a5dd221b7fe1a4a389 237 SMART SM00855 10 167 2.5E-11 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS14520 1c2f50b01fdf09a5dd221b7fe1a4a389 237 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 11 208 2.4E-33 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS14520 1c2f50b01fdf09a5dd221b7fe1a4a389 237 Gene3D G3DSA:3.40.50.1240 9 224 3.3E-31 T 22-04-2016 IPR029033 Histidine phosphatase superfamily JE55_RS14520 1c2f50b01fdf09a5dd221b7fe1a4a389 237 PANTHER PTHR23029:SF1 3 170 1.4E-25 T 22-04-2016 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 485 1.9E-171 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 PANTHER PTHR23429:SF0 1 484 1.6E-205 T 22-04-2016 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 Gene3D G3DSA:3.30.360.10 186 485 4.2E-123 T 22-04-2016 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 PIRSF PIRSF000110 1 488 2.1E-167 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 SUPERFAMILY SSF55347 176 485 2.49E-115 T 22-04-2016 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 484 1.6E-114 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 2.8E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 2.8E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 2.8E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 2.8E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 2.8E-47 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 486 79.725 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 PANTHER PTHR23429 1 484 1.6E-205 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 186 3.0E-55 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 SUPERFAMILY SSF51735 4 189 1.58E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04045 2086243567e2569420d84d7eab4c2228 489 Gene3D G3DSA:3.40.50.720 5 185 6.9E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS16300 34c92b329809f15ac224adf81249858b 554 Pfam PF00849 RNA pseudouridylate synthase 246 379 2.7E-13 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS16300 34c92b329809f15ac224adf81249858b 554 SUPERFAMILY SSF55174 185 276 1.96E-16 T 22-04-2016 JE55_RS16300 34c92b329809f15ac224adf81249858b 554 SUPERFAMILY SSF55120 244 415 2.4E-40 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS16300 34c92b329809f15ac224adf81249858b 554 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 284 298 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 JE55_RS16300 34c92b329809f15ac224adf81249858b 554 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 250 410 7.9E-50 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JE55_RS16300 34c92b329809f15ac224adf81249858b 554 Pfam PF01479 S4 domain 185 226 2.8E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS16300 34c92b329809f15ac224adf81249858b 554 Gene3D G3DSA:3.10.290.10 185 237 4.0E-16 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS16300 34c92b329809f15ac224adf81249858b 554 PANTHER PTHR21600:SF2 184 421 9.5E-82 T 22-04-2016 JE55_RS16300 34c92b329809f15ac224adf81249858b 554 PANTHER PTHR21600 184 421 9.5E-82 T 22-04-2016 JE55_RS16300 34c92b329809f15ac224adf81249858b 554 SMART SM00363 183 240 9.4E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS06350 3c3242699473a9aba3c3a939dd92b0f4 208 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 7 208 30.846 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 JE55_RS06350 3c3242699473a9aba3c3a939dd92b0f4 208 Gene3D G3DSA:1.20.1260.10 55 175 9.8E-8 T 22-04-2016 IPR012347 Ferritin-related JE55_RS06350 3c3242699473a9aba3c3a939dd92b0f4 208 PANTHER PTHR11237 4 208 8.8E-82 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 JE55_RS06350 3c3242699473a9aba3c3a939dd92b0f4 208 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 48 207 1.3E-42 T 22-04-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 UniPathway: UPA00232 JE55_RS06350 3c3242699473a9aba3c3a939dd92b0f4 208 SUPERFAMILY SSF47240 42 122 9.49E-17 T 22-04-2016 IPR009078 Ferritin-like superfamily JE55_RS06350 3c3242699473a9aba3c3a939dd92b0f4 208 PANTHER PTHR11237:SF3 4 208 8.8E-82 T 22-04-2016 JE55_RS16995 c78f066c4c82614bd414e28bcefc75dc 329 PANTHER PTHR11019 21 288 7.7E-43 T 22-04-2016 JE55_RS16995 c78f066c4c82614bd414e28bcefc75dc 329 SUPERFAMILY SSF46689 233 282 3.63E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS16995 c78f066c4c82614bd414e28bcefc75dc 329 SMART SM00342 197 280 4.4E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS16995 c78f066c4c82614bd414e28bcefc75dc 329 SUPERFAMILY SSF51215 22 82 5.89E-8 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JE55_RS16995 c78f066c4c82614bd414e28bcefc75dc 329 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JE55_RS16995 c78f066c4c82614bd414e28bcefc75dc 329 Gene3D G3DSA:1.10.10.60 234 282 5.8E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS16995 c78f066c4c82614bd414e28bcefc75dc 329 SUPERFAMILY SSF46689 180 231 1.86E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS16995 c78f066c4c82614bd414e28bcefc75dc 329 Gene3D G3DSA:2.60.120.10 22 80 2.2E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS16995 c78f066c4c82614bd414e28bcefc75dc 329 Pfam PF12833 Helix-turn-helix domain 203 281 3.8E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS16995 c78f066c4c82614bd414e28bcefc75dc 329 PANTHER PTHR11019:SF123 21 288 7.7E-43 T 22-04-2016 JE55_RS16995 c78f066c4c82614bd414e28bcefc75dc 329 Gene3D G3DSA:1.10.10.60 180 233 4.3E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS03260 eab1f24a3e8bd54ae4f186d101abab47 167 PANTHER PTHR10545 11 166 6.0E-66 T 22-04-2016 JE55_RS03260 eab1f24a3e8bd54ae4f186d101abab47 167 Gene3D G3DSA:3.40.630.30 8 163 8.0E-59 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS03260 eab1f24a3e8bd54ae4f186d101abab47 167 Pfam PF00583 Acetyltransferase (GNAT) family 63 142 2.5E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS03260 eab1f24a3e8bd54ae4f186d101abab47 167 SUPERFAMILY SSF55729 9 152 5.49E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS04895 718391f7fb987c6b92b6dea5e5df14d9 183 PANTHER PTHR21485:SF3 10 159 2.3E-38 T 22-04-2016 JE55_RS04895 718391f7fb987c6b92b6dea5e5df14d9 183 PANTHER PTHR21485 10 159 2.3E-38 T 22-04-2016 JE55_RS04895 718391f7fb987c6b92b6dea5e5df14d9 183 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 10 160 1.9E-43 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS04895 718391f7fb987c6b92b6dea5e5df14d9 183 PIRSF PIRSF006118 4 172 1.3E-54 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS04895 718391f7fb987c6b92b6dea5e5df14d9 183 Gene3D G3DSA:3.40.50.1000 9 164 2.5E-41 T 22-04-2016 IPR023214 HAD-like domain JE55_RS04895 718391f7fb987c6b92b6dea5e5df14d9 183 Pfam PF00702 haloacid dehalogenase-like hydrolase 45 121 6.2E-6 T 22-04-2016 JE55_RS04895 718391f7fb987c6b92b6dea5e5df14d9 183 SUPERFAMILY SSF56784 10 159 4.01E-37 T 22-04-2016 IPR023214 HAD-like domain JE55_RS08040 b8f9a6e936b65ba28560ab344fc9798f 382 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 29 375 1.3E-102 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JE55_RS08040 b8f9a6e936b65ba28560ab344fc9798f 382 Gene3D G3DSA:3.40.640.10 29 254 1.5E-69 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS08040 b8f9a6e936b65ba28560ab344fc9798f 382 SUPERFAMILY SSF53383 18 378 8.9E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS08040 b8f9a6e936b65ba28560ab344fc9798f 382 PIRSF PIRSF000390 13 381 1.7E-104 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JE55_RS08040 b8f9a6e936b65ba28560ab344fc9798f 382 Gene3D G3DSA:3.90.1150.10 256 377 3.3E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS08040 b8f9a6e936b65ba28560ab344fc9798f 382 PANTHER PTHR30244:SF9 11 377 5.2E-169 T 22-04-2016 JE55_RS08040 b8f9a6e936b65ba28560ab344fc9798f 382 PANTHER PTHR30244 11 377 5.2E-169 T 22-04-2016 JE55_RS15710 1ab96b1077c4522fb774cd4df11e3531 93 SUPERFAMILY SSF81273 57 90 2.71E-8 T 22-04-2016 JE55_RS15710 1ab96b1077c4522fb774cd4df11e3531 93 Gene3D G3DSA:4.10.430.10 59 84 3.1E-5 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 JE55_RS15710 1ab96b1077c4522fb774cd4df11e3531 93 Pfam PF00816 H-NS histone family 7 85 1.6E-18 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 PANTHER PTHR30244:SF1 2 179 1.4E-96 T 22-04-2016 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 PANTHER PTHR30244:SF1 199 388 1.4E-96 T 22-04-2016 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 SUPERFAMILY SSF64518 1 388 1.28E-89 T 22-04-2016 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 Pfam PF12613 Flagellin structural protein 238 294 6.4E-25 T 22-04-2016 IPR022578 Flagellin, domain of unknown function JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 Gene3D G3DSA:1.20.1330.10 290 343 8.8E-45 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 Gene3D G3DSA:1.20.1330.10 53 170 8.8E-45 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 PRINTS PR00207 Flagellin signature 75 94 5.4E-23 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 PRINTS PR00207 Flagellin signature 110 133 5.4E-23 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 PRINTS PR00207 Flagellin signature 36 53 5.4E-23 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 Pfam PF00700 Bacterial flagellin C-terminal helical region 304 387 2.7E-19 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 PANTHER PTHR30244 2 179 1.4E-96 T 22-04-2016 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 PANTHER PTHR30244 199 388 1.4E-96 T 22-04-2016 JE55_RS08020 8edc4b9c9841005fd129efbb89f505da 388 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 140 2.1E-38 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 Gene3D G3DSA:1.10.274.10 27 135 3.4E-34 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 Gene3D G3DSA:3.20.20.60 265 578 3.9E-101 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 SUPERFAMILY SSF47831 28 146 7.32E-31 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 Pfam PF00391 PEP-utilising enzyme, mobile domain 161 234 5.9E-23 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 458 473 7.9E-27 T 22-04-2016 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 302 321 7.9E-27 T 22-04-2016 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 475 490 7.9E-27 T 22-04-2016 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 511 523 7.9E-27 T 22-04-2016 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 SUPERFAMILY SSF52009 128 253 1.44E-30 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 PIRSF PIRSF000732 1 584 2.4E-207 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 PANTHER PTHR22931:SF28 34 561 4.9E-154 T 22-04-2016 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 573 6.6E-161 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 3.8E-29 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 Gene3D G3DSA:3.50.30.10 136 264 1.6E-42 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 PANTHER PTHR22931 34 561 4.9E-154 T 22-04-2016 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 SUPERFAMILY SSF51621 258 557 1.57E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 458 476 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 193 204 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JE55_RS10675 fdff46d926e5440237c461b85c821802 590 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 261 551 3.3E-108 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 JE55_RS10965 e65ae9a93c6de5396165b7d72843bc43 367 SUPERFAMILY SSF51556 45 333 9.36E-85 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS10965 e65ae9a93c6de5396165b7d72843bc43 367 PANTHER PTHR11113 4 365 1.9E-128 T 22-04-2016 JE55_RS10965 e65ae9a93c6de5396165b7d72843bc43 367 PIRSF PIRSF038994 5 366 9.9E-103 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 JE55_RS10965 e65ae9a93c6de5396165b7d72843bc43 367 Gene3D G3DSA:3.20.20.140 45 334 1.1E-94 T 22-04-2016 JE55_RS10965 e65ae9a93c6de5396165b7d72843bc43 367 PANTHER PTHR11113:SF7 4 365 1.9E-128 T 22-04-2016 JE55_RS10965 e65ae9a93c6de5396165b7d72843bc43 367 Pfam PF01979 Amidohydrolase family 41 360 1.5E-16 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 JE55_RS10965 e65ae9a93c6de5396165b7d72843bc43 367 SUPERFAMILY SSF51338 334 364 2.38E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS10965 e65ae9a93c6de5396165b7d72843bc43 367 SUPERFAMILY SSF51338 4 44 2.38E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS10965 e65ae9a93c6de5396165b7d72843bc43 367 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 37 360 1.3E-80 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 163 260 2.6E-19 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 450 46.704 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 PANTHER PTHR22573:SF15 3 449 3.1E-154 T 22-04-2016 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 SUPERFAMILY SSF55957 363 450 1.83E-22 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 Gene3D G3DSA:3.40.120.10 3 158 2.0E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 102 111 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 264 371 1.2E-29 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 SUPERFAMILY SSF53738 2 187 3.3E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 Gene3D G3DSA:3.30.310.50 375 450 1.3E-17 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 SUPERFAMILY SSF53738 264 370 1.73E-27 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 240 255 1.1E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 101 115 1.1E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 1.1E-13 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 379 447 2.4E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 SUPERFAMILY SSF53738 162 261 4.32E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 PANTHER PTHR22573 3 449 3.1E-154 T 22-04-2016 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 Gene3D G3DSA:3.40.120.10 257 372 6.8E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 Gene3D G3DSA:3.40.120.10 182 256 3.5E-24 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 139 6.1E-42 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS15240 7a0f160564f03e985103b9dddfb1634b 452 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 448 3.7E-180 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 296 3.6E-6 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 391 423 6.5E-6 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 313 347 1.3E-4 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 Gene3D G3DSA:3.90.550.10 1 237 4.1E-73 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 PANTHER PTHR22572:SF115 2 445 7.2E-198 T 22-04-2016 JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 450 2.8E-185 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 448 40.901 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 PANTHER PTHR22572 2 445 7.2E-198 T 22-04-2016 JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 SUPERFAMILY SSF53448 1 248 9.01E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 Gene3D G3DSA:2.160.10.10 238 319 9.0E-17 T 22-04-2016 JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 Pfam PF12804 MobA-like NTP transferase domain 4 130 1.2E-23 T 22-04-2016 IPR025877 MobA-like NTP transferase JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 SUPERFAMILY SSF51161 251 433 6.29E-46 T 22-04-2016 IPR011004 Trimeric LpxA-like JE55_RS10005 8f868c36a14a0b1ee466ae1f59fffe9f 453 Gene3D G3DSA:2.160.10.10 320 449 1.4E-30 T 22-04-2016 JE55_RS16345 bf18d8ee38f319d7b6c05555a47a3320 165 Gene3D G3DSA:1.10.10.10 5 153 5.3E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16345 bf18d8ee38f319d7b6c05555a47a3320 165 Pfam PF12802 MarR family 45 103 3.5E-13 T 22-04-2016 JE55_RS16345 bf18d8ee38f319d7b6c05555a47a3320 165 SMART SM00347 40 140 9.8E-23 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS16345 bf18d8ee38f319d7b6c05555a47a3320 165 PANTHER PTHR33164 15 151 2.3E-24 T 22-04-2016 JE55_RS16345 bf18d8ee38f319d7b6c05555a47a3320 165 SUPERFAMILY SSF46785 13 151 2.9E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16345 bf18d8ee38f319d7b6c05555a47a3320 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 130 150 1.0E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS16345 bf18d8ee38f319d7b6c05555a47a3320 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 1.0E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS16345 bf18d8ee38f319d7b6c05555a47a3320 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 1.0E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS16345 bf18d8ee38f319d7b6c05555a47a3320 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 1.0E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS03840 794354d6ec38e56b050eea5350652e75 379 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 51 62 4.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS03840 794354d6ec38e56b050eea5350652e75 379 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 157 168 4.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS03840 794354d6ec38e56b050eea5350652e75 379 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 4.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS03840 794354d6ec38e56b050eea5350652e75 379 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 184 196 4.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS03840 794354d6ec38e56b050eea5350652e75 379 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 322 339 4.7E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS03840 794354d6ec38e56b050eea5350652e75 379 PRINTS PR00184 Neisseria sp. porin signature 185 202 2.0E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS03840 794354d6ec38e56b050eea5350652e75 379 PRINTS PR00184 Neisseria sp. porin signature 319 343 2.0E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS03840 794354d6ec38e56b050eea5350652e75 379 PRINTS PR00184 Neisseria sp. porin signature 53 78 2.0E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS03840 794354d6ec38e56b050eea5350652e75 379 Pfam PF13609 Gram-negative porin 8 347 2.4E-52 T 22-04-2016 JE55_RS03840 794354d6ec38e56b050eea5350652e75 379 Gene3D G3DSA:2.40.160.10 21 379 1.9E-100 T 22-04-2016 IPR023614 Porin domain JE55_RS03840 794354d6ec38e56b050eea5350652e75 379 SUPERFAMILY SSF56935 21 379 5.95E-88 T 22-04-2016 JE55_RS13630 3d250c9a85b89abaebe5fb75fd481779 308 Gene3D G3DSA:3.40.50.1820 6 295 3.9E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS13630 3d250c9a85b89abaebe5fb75fd481779 308 PRINTS PR00412 Epoxide hydrolase signature 270 292 4.3E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS13630 3d250c9a85b89abaebe5fb75fd481779 308 PRINTS PR00412 Epoxide hydrolase signature 103 116 4.3E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS13630 3d250c9a85b89abaebe5fb75fd481779 308 PRINTS PR00412 Epoxide hydrolase signature 37 55 4.3E-7 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS13630 3d250c9a85b89abaebe5fb75fd481779 308 Pfam PF00561 alpha/beta hydrolase fold 32 143 1.7E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS13630 3d250c9a85b89abaebe5fb75fd481779 308 PANTHER PTHR10992 7 167 1.3E-27 T 22-04-2016 JE55_RS13630 3d250c9a85b89abaebe5fb75fd481779 308 PANTHER PTHR10992 190 295 1.3E-27 T 22-04-2016 JE55_RS13630 3d250c9a85b89abaebe5fb75fd481779 308 SUPERFAMILY SSF53474 7 295 1.88E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS13030 4741d5d3986becf57ed6506329510cc3 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 4.4E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS13030 4741d5d3986becf57ed6506329510cc3 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 4.4E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS13030 4741d5d3986becf57ed6506329510cc3 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 4.4E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS13030 4741d5d3986becf57ed6506329510cc3 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 4.4E-13 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS13030 4741d5d3986becf57ed6506329510cc3 298 SUPERFAMILY SSF51569 4 292 1.57E-88 T 22-04-2016 JE55_RS13030 4741d5d3986becf57ed6506329510cc3 298 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 2.5E-57 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS13030 4741d5d3986becf57ed6506329510cc3 298 PANTHER PTHR12128 1 292 7.7E-87 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS13030 4741d5d3986becf57ed6506329510cc3 298 SMART SM01130 4 293 2.3E-102 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS13030 4741d5d3986becf57ed6506329510cc3 298 PANTHER PTHR12128:SF34 1 292 7.7E-87 T 22-04-2016 JE55_RS13030 4741d5d3986becf57ed6506329510cc3 298 Gene3D G3DSA:3.20.20.70 3 292 3.8E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS13030 4741d5d3986becf57ed6506329510cc3 298 PIRSF PIRSF001365 2 298 1.3E-85 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 Pfam PF00005 ABC transporter 340 473 2.9E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 Pfam PF00005 ABC transporter 22 191 3.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 PANTHER PTHR19211:SF7 1 555 0.0 T 22-04-2016 JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 SUPERFAMILY SSF52540 12 236 1.78E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 Pfam PF12848 ABC transporter 230 306 2.4E-13 T 22-04-2016 IPR032781 ABC-transporter extension domain JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 2.5E-294 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 SUPERFAMILY SSF52540 301 525 1.45E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 PANTHER PTHR19211 1 555 0.0 T 22-04-2016 JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 SMART SM00382 348 524 1.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 SMART SM00382 31 236 5.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 Gene3D G3DSA:3.40.50.300 321 537 2.8E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 Gene3D G3DSA:3.40.50.300 141 288 3.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06560 4472df6d67d6dc64bfeeb84e3ca6c177 555 Gene3D G3DSA:3.40.50.300 12 105 3.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08355 6a75ddef7bb05030cf9fcefa6d34b5ce 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 60 83 6.9E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS08355 6a75ddef7bb05030cf9fcefa6d34b5ce 232 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 52 6.9E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS08355 6a75ddef7bb05030cf9fcefa6d34b5ce 232 Pfam PF00440 Bacterial regulatory proteins, tetR family 44 82 2.6E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS08355 6a75ddef7bb05030cf9fcefa6d34b5ce 232 Gene3D G3DSA:1.10.357.10 24 211 2.6E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS08355 6a75ddef7bb05030cf9fcefa6d34b5ce 232 ProSitePatterns PS01081 TetR-type HTH domain signature. 51 81 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JE55_RS08355 6a75ddef7bb05030cf9fcefa6d34b5ce 232 PANTHER PTHR30055 22 223 4.9E-22 T 22-04-2016 JE55_RS08355 6a75ddef7bb05030cf9fcefa6d34b5ce 232 SUPERFAMILY SSF48498 108 197 1.74E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS08355 6a75ddef7bb05030cf9fcefa6d34b5ce 232 SUPERFAMILY SSF46689 25 102 3.74E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS05585 e8ac5e8da93ec4677350905902322294 220 SMART SM00855 5 164 2.4E-23 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS05585 e8ac5e8da93ec4677350905902322294 220 PANTHER PTHR23029 2 211 1.3E-59 T 22-04-2016 JE55_RS05585 e8ac5e8da93ec4677350905902322294 220 Gene3D G3DSA:3.40.50.1240 1 212 3.3E-65 T 22-04-2016 IPR029033 Histidine phosphatase superfamily JE55_RS05585 e8ac5e8da93ec4677350905902322294 220 PANTHER PTHR23029:SF1 2 211 1.3E-59 T 22-04-2016 JE55_RS05585 e8ac5e8da93ec4677350905902322294 220 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 203 1.2E-65 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS05585 e8ac5e8da93ec4677350905902322294 220 SUPERFAMILY SSF53254 1 209 5.27E-64 T 22-04-2016 IPR029033 Histidine phosphatase superfamily JE55_RS10430 700e8b69a19ea28580cd71bb92d0bfea 414 Pfam PF01734 Patatin-like phospholipase 5 225 2.5E-19 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 JE55_RS10430 700e8b69a19ea28580cd71bb92d0bfea 414 SUPERFAMILY SSF52151 1 238 1.2E-43 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 JE55_RS10430 700e8b69a19ea28580cd71bb92d0bfea 414 Gene3D G3DSA:3.40.1090.10 5 216 6.8E-9 T 22-04-2016 JE55_RS10430 700e8b69a19ea28580cd71bb92d0bfea 414 PANTHER PTHR14226:SF34 180 335 1.5E-70 T 22-04-2016 JE55_RS10430 700e8b69a19ea28580cd71bb92d0bfea 414 PANTHER PTHR14226:SF34 4 162 1.5E-70 T 22-04-2016 JE55_RS10430 700e8b69a19ea28580cd71bb92d0bfea 414 PANTHER PTHR14226 180 335 1.5E-70 T 22-04-2016 JE55_RS10430 700e8b69a19ea28580cd71bb92d0bfea 414 PANTHER PTHR14226 4 162 1.5E-70 T 22-04-2016 JE55_RS17205 f1d48ce9936421e4886dc3af064ceeaa 364 Pfam PF01888 CbiD 13 273 1.0E-89 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 JE55_RS17205 f1d48ce9936421e4886dc3af064ceeaa 364 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 13 363 28.007 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 JE55_RS17205 f1d48ce9936421e4886dc3af064ceeaa 364 Gene3D G3DSA:3.30.2110.10 16 188 3.8E-57 T 22-04-2016 JE55_RS17205 f1d48ce9936421e4886dc3af064ceeaa 364 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 20 360 1.7E-58 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 JE55_RS17205 f1d48ce9936421e4886dc3af064ceeaa 364 SUPERFAMILY SSF111342 6 291 3.14E-83 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 JE55_RS17205 f1d48ce9936421e4886dc3af064ceeaa 364 PANTHER PTHR35863 2 361 5.0E-113 T 22-04-2016 JE55_RS17205 f1d48ce9936421e4886dc3af064ceeaa 364 PIRSF PIRSF026782 10 364 1.4E-122 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 JE55_RS17205 f1d48ce9936421e4886dc3af064ceeaa 364 PANTHER PTHR35863:SF1 2 361 5.0E-113 T 22-04-2016 JE55_RS13800 1232d60c7786dd8fd19a4c3e3eb7eaa1 280 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 175 1.7E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS13800 1232d60c7786dd8fd19a4c3e3eb7eaa1 280 SMART SM00382 25 183 8.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS13800 1232d60c7786dd8fd19a4c3e3eb7eaa1 280 PANTHER PTHR22908 1 233 1.2E-72 T 22-04-2016 JE55_RS13800 1232d60c7786dd8fd19a4c3e3eb7eaa1 280 SUPERFAMILY SSF52540 8 265 1.59E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13800 1232d60c7786dd8fd19a4c3e3eb7eaa1 280 Gene3D G3DSA:3.40.50.300 9 201 1.6E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11180 2c1d3cc18976edd5e3157945b03b4d70 221 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 39 195 2.7E-45 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 JE55_RS11180 2c1d3cc18976edd5e3157945b03b4d70 221 Gene3D G3DSA:2.60.450.10 39 191 4.6E-37 T 22-04-2016 JE55_RS11180 2c1d3cc18976edd5e3157945b03b4d70 221 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 19 195 26.982 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 JE55_RS11180 2c1d3cc18976edd5e3157945b03b4d70 221 PANTHER PTHR36504 13 213 4.0E-20 T 22-04-2016 JE55_RS11180 2c1d3cc18976edd5e3157945b03b4d70 221 Pfam PF03968 OstA-like protein 49 168 3.9E-30 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal JE55_RS07305 7641e7194debd8bd1c7ebdad2e891940 121 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 121 1.0E-36 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07305 7641e7194debd8bd1c7ebdad2e891940 121 SUPERFAMILY SSF53137 3 119 5.89E-50 T 22-04-2016 JE55_RS07305 7641e7194debd8bd1c7ebdad2e891940 121 PANTHER PTHR12899 1 121 9.0E-34 T 22-04-2016 JE55_RS07305 7641e7194debd8bd1c7ebdad2e891940 121 Gene3D G3DSA:3.30.420.100 24 121 4.1E-35 T 22-04-2016 JE55_RS07305 7641e7194debd8bd1c7ebdad2e891940 121 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 121 25.735 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07305 7641e7194debd8bd1c7ebdad2e891940 121 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 121 1.7E-35 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07405 903c163b8e1b8627ff051aaab5ae344b 156 Gene3D G3DSA:1.10.455.10 7 156 3.9E-65 T 22-04-2016 IPR023798 Ribosomal protein S7 domain JE55_RS07405 903c163b8e1b8627ff051aaab5ae344b 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.086 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 JE55_RS07405 903c163b8e1b8627ff051aaab5ae344b 156 PIRSF PIRSF002122 3 156 1.0E-59 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 JE55_RS07405 903c163b8e1b8627ff051aaab5ae344b 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 JE55_RS07405 903c163b8e1b8627ff051aaab5ae344b 156 SUPERFAMILY SSF47973 2 149 4.97E-62 T 22-04-2016 IPR023798 Ribosomal protein S7 domain JE55_RS07405 903c163b8e1b8627ff051aaab5ae344b 156 PANTHER PTHR11205 1 156 6.2E-88 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 JE55_RS07405 903c163b8e1b8627ff051aaab5ae344b 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 2.5E-65 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 JE55_RS07405 903c163b8e1b8627ff051aaab5ae344b 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 9.4E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain JE55_RS17120 b8b45afcf4cc2c07b4c5b5314a0d0ca2 200 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 28 200 9.9E-69 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 JE55_RS17120 b8b45afcf4cc2c07b4c5b5314a0d0ca2 200 SUPERFAMILY SSF52540 10 200 1.54E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17120 b8b45afcf4cc2c07b4c5b5314a0d0ca2 200 Gene3D G3DSA:3.40.50.300 5 200 4.7E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17120 b8b45afcf4cc2c07b4c5b5314a0d0ca2 200 PIRSF PIRSF015617 3 200 7.3E-71 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 JE55_RS17120 b8b45afcf4cc2c07b4c5b5314a0d0ca2 200 PANTHER PTHR30069 8 200 1.0E-58 T 22-04-2016 JE55_RS17120 b8b45afcf4cc2c07b4c5b5314a0d0ca2 200 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 29 200 3.4E-62 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 JE55_RS17625 c34ae44b53cd8f401e46b17c861ec1e5 387 Pfam PF13609 Gram-negative porin 19 351 2.2E-49 T 22-04-2016 JE55_RS17625 c34ae44b53cd8f401e46b17c861ec1e5 387 SUPERFAMILY SSF56935 28 387 7.33E-84 T 22-04-2016 JE55_RS17625 c34ae44b53cd8f401e46b17c861ec1e5 387 Gene3D G3DSA:2.40.160.10 28 387 3.6E-97 T 22-04-2016 IPR023614 Porin domain JE55_RS17625 c34ae44b53cd8f401e46b17c861ec1e5 387 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 165 176 1.4E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS17625 c34ae44b53cd8f401e46b17c861ec1e5 387 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 256 273 1.4E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS17625 c34ae44b53cd8f401e46b17c861ec1e5 387 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 105 115 1.4E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS17625 c34ae44b53cd8f401e46b17c861ec1e5 387 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 61 72 1.4E-5 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 JE55_RS17625 c34ae44b53cd8f401e46b17c861ec1e5 387 PRINTS PR00184 Neisseria sp. porin signature 164 181 1.4E-12 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS17625 c34ae44b53cd8f401e46b17c861ec1e5 387 PRINTS PR00184 Neisseria sp. porin signature 63 88 1.4E-12 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS17625 c34ae44b53cd8f401e46b17c861ec1e5 387 PRINTS PR00184 Neisseria sp. porin signature 327 351 1.4E-12 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS12290 51bc59856c0b4b4445c03afdef9c37ca 172 PIRSF PIRSF001338 10 169 7.1E-64 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 JE55_RS12290 51bc59856c0b4b4445c03afdef9c37ca 172 SMART SM01001 13 164 4.7E-98 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 JE55_RS12290 51bc59856c0b4b4445c03afdef9c37ca 172 SUPERFAMILY SSF52255 14 166 7.85E-64 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 JE55_RS12290 51bc59856c0b4b4445c03afdef9c37ca 172 PANTHER PTHR23046 13 162 1.8E-77 T 22-04-2016 JE55_RS12290 51bc59856c0b4b4445c03afdef9c37ca 172 Pfam PF00731 AIR carboxylase 15 162 5.2E-62 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 JE55_RS12290 51bc59856c0b4b4445c03afdef9c37ca 172 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 15 168 30.939 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 JE55_RS12290 51bc59856c0b4b4445c03afdef9c37ca 172 PANTHER PTHR23046:SF2 13 162 1.8E-77 T 22-04-2016 JE55_RS12290 51bc59856c0b4b4445c03afdef9c37ca 172 Gene3D G3DSA:3.40.50.7700 5 165 1.5E-72 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 JE55_RS12290 51bc59856c0b4b4445c03afdef9c37ca 172 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 15 163 3.5E-61 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 SUPERFAMILY SSF46689 375 464 2.9E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 Gene3D G3DSA:1.10.8.60 337 413 1.5E-20 T 22-04-2016 JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 PANTHER PTHR32071:SF34 51 475 1.1E-142 T 22-04-2016 JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 Pfam PF00158 Sigma-54 interaction domain 165 330 3.7E-69 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 SMART SM00382 184 327 3.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 Pfam PF02954 Bacterial regulatory protein, Fis family 423 457 2.1E-6 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 PANTHER PTHR32071 51 475 1.1E-142 T 22-04-2016 JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 Gene3D G3DSA:3.40.50.300 162 336 4.6E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 Gene3D G3DSA:1.10.10.60 414 464 1.1E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 SUPERFAMILY SSF52540 164 405 3.47E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 377 386 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS03395 d3c675fc87e67f69b95f99fd47d0a81f 486 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 250 265 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS02030 6aed9b3ee1410999bf6684a14d531487 221 PANTHER PTHR22939:SF104 36 203 4.6E-36 T 22-04-2016 JE55_RS02030 6aed9b3ee1410999bf6684a14d531487 221 PANTHER PTHR22939 36 203 4.6E-36 T 22-04-2016 JE55_RS27595 5e9e5b80641c65d8676b19f6aaab6878 194 PANTHER PTHR10110 72 194 7.3E-26 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 JE55_RS27595 5e9e5b80641c65d8676b19f6aaab6878 194 Pfam PF00999 Sodium/hydrogen exchanger family 120 189 2.1E-11 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JE55_RS27595 5e9e5b80641c65d8676b19f6aaab6878 194 PANTHER PTHR10110:SF120 72 194 7.3E-26 T 22-04-2016 JE55_RS11435 083560a11c12c9b06a52866af349d0a1 407 Gene3D G3DSA:1.20.140.10 245 400 2.8E-14 T 22-04-2016 JE55_RS11435 083560a11c12c9b06a52866af349d0a1 407 SUPERFAMILY SSF56645 26 228 4.45E-36 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS11435 083560a11c12c9b06a52866af349d0a1 407 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 257 378 7.7E-7 T 22-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain JE55_RS11435 083560a11c12c9b06a52866af349d0a1 407 SUPERFAMILY SSF47203 248 389 1.47E-12 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS11435 083560a11c12c9b06a52866af349d0a1 407 PANTHER PTHR10909 14 159 2.0E-14 T 22-04-2016 JE55_RS11435 083560a11c12c9b06a52866af349d0a1 407 Gene3D G3DSA:1.10.540.10 22 128 5.1E-19 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS11435 083560a11c12c9b06a52866af349d0a1 407 Gene3D G3DSA:2.40.110.10 135 223 4.6E-5 T 22-04-2016 JE55_RS11435 083560a11c12c9b06a52866af349d0a1 407 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 24 129 4.8E-10 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS07325 759e67b0fca735ab258aff33006f9de2 179 PANTHER PTHR11994 1 178 5.5E-89 T 22-04-2016 JE55_RS07325 759e67b0fca735ab258aff33006f9de2 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.4E-38 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal JE55_RS07325 759e67b0fca735ab258aff33006f9de2 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.965 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07325 759e67b0fca735ab258aff33006f9de2 179 Gene3D G3DSA:3.30.1440.10 1 179 1.6E-75 T 22-04-2016 IPR022803 Ribosomal protein L5 domain JE55_RS07325 759e67b0fca735ab258aff33006f9de2 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07325 759e67b0fca735ab258aff33006f9de2 179 Pfam PF00281 Ribosomal protein L5 24 80 1.4E-27 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal JE55_RS07325 759e67b0fca735ab258aff33006f9de2 179 SUPERFAMILY SSF55282 3 179 5.18E-76 T 22-04-2016 IPR022803 Ribosomal protein L5 domain JE55_RS07325 759e67b0fca735ab258aff33006f9de2 179 PIRSF PIRSF002161 1 179 7.3E-62 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 JE55_RS03450 a91f9541518fd7184f0a1ccab5bc7e1d 227 SUPERFAMILY SSF55811 58 218 2.98E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS03450 a91f9541518fd7184f0a1ccab5bc7e1d 227 PANTHER PTHR12992 6 225 2.7E-53 T 22-04-2016 JE55_RS03450 a91f9541518fd7184f0a1ccab5bc7e1d 227 Pfam PF00293 NUDIX domain 61 141 1.7E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 JE55_RS03450 a91f9541518fd7184f0a1ccab5bc7e1d 227 Gene3D G3DSA:3.90.79.10 34 225 1.2E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS17650 d19f9cfd62e86fac23fa23698382be03 294 Gene3D G3DSA:1.10.3720.10 14 280 1.1E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17650 d19f9cfd62e86fac23fa23698382be03 294 SUPERFAMILY SSF161098 19 286 6.15E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17650 d19f9cfd62e86fac23fa23698382be03 294 PANTHER PTHR30193 14 294 1.0E-80 T 22-04-2016 JE55_RS17650 d19f9cfd62e86fac23fa23698382be03 294 PANTHER PTHR30193:SF8 14 294 1.0E-80 T 22-04-2016 JE55_RS17650 d19f9cfd62e86fac23fa23698382be03 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 280 1.4E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS09510 a20eba1116ab603f877f61998b3363cf 472 Pfam PF00171 Aldehyde dehydrogenase family 28 441 7.3E-89 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS09510 a20eba1116ab603f877f61998b3363cf 472 Gene3D G3DSA:3.40.309.10 233 422 7.9E-55 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS09510 a20eba1116ab603f877f61998b3363cf 472 SUPERFAMILY SSF53720 7 468 5.76E-120 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS09510 a20eba1116ab603f877f61998b3363cf 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 217 224 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 JE55_RS09510 a20eba1116ab603f877f61998b3363cf 472 PANTHER PTHR11699 8 472 9.5E-173 T 22-04-2016 JE55_RS09510 a20eba1116ab603f877f61998b3363cf 472 Gene3D G3DSA:3.40.605.10 9 232 3.9E-56 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS09510 a20eba1116ab603f877f61998b3363cf 472 PIRSF PIRSF036492 2 472 1.0E-160 T 22-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 JE55_RS09510 a20eba1116ab603f877f61998b3363cf 472 PANTHER PTHR11699:SF15 8 472 9.5E-173 T 22-04-2016 JE55_RS09680 fd339c73de8c97e107b50567d4cf72da 318 Pfam PF06166 Protein of unknown function (DUF979) 7 317 2.9E-124 T 22-04-2016 IPR009323 Protein of unknown function DUF979 JE55_RS11520 65734101f6e87d447519f3d3fcb3c776 493 Gene3D G3DSA:3.30.1490.130 289 344 4.6E-29 T 22-04-2016 IPR023100 D-aminoacylase, insert domain GO:0016811 JE55_RS11520 65734101f6e87d447519f3d3fcb3c776 493 PANTHER PTHR22935:SF55 321 489 2.7E-35 T 22-04-2016 JE55_RS11520 65734101f6e87d447519f3d3fcb3c776 493 SUPERFAMILY SSF51338 9 63 6.56E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS11520 65734101f6e87d447519f3d3fcb3c776 493 SUPERFAMILY SSF51338 428 482 6.56E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS11520 65734101f6e87d447519f3d3fcb3c776 493 Gene3D G3DSA:2.30.40.10 9 65 1.1E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS11520 65734101f6e87d447519f3d3fcb3c776 493 Gene3D G3DSA:3.20.20.140 345 404 1.8E-118 T 22-04-2016 JE55_RS11520 65734101f6e87d447519f3d3fcb3c776 493 Gene3D G3DSA:3.20.20.140 66 286 1.8E-118 T 22-04-2016 JE55_RS11520 65734101f6e87d447519f3d3fcb3c776 493 PANTHER PTHR22935 321 489 2.7E-35 T 22-04-2016 JE55_RS11520 65734101f6e87d447519f3d3fcb3c776 493 Gene3D G3DSA:2.30.40.10 405 469 3.4E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS11520 65734101f6e87d447519f3d3fcb3c776 493 Pfam PF07969 Amidohydrolase family 50 464 8.5E-43 T 22-04-2016 IPR013108 Amidohydrolase 3 JE55_RS11520 65734101f6e87d447519f3d3fcb3c776 493 SUPERFAMILY SSF51556 62 420 3.91E-88 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS01440 5480835c6707f58cef01a96334801294 234 PANTHER PTHR21666 89 203 1.2E-41 T 22-04-2016 JE55_RS01440 5480835c6707f58cef01a96334801294 234 SUPERFAMILY SSF54001 78 202 1.23E-43 T 22-04-2016 JE55_RS01440 5480835c6707f58cef01a96334801294 234 Pfam PF00877 NlpC/P60 family 94 201 8.2E-32 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS01440 5480835c6707f58cef01a96334801294 234 Gene3D G3DSA:3.90.1720.10 80 203 1.5E-48 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS31565 e342120d4c0b55872f94be1289bf10a9 159 PRINTS PR00702 Acriflavin resistance protein family signature 127 151 2.8E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31565 e342120d4c0b55872f94be1289bf10a9 159 PRINTS PR00702 Acriflavin resistance protein family signature 99 120 2.8E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31565 e342120d4c0b55872f94be1289bf10a9 159 PRINTS PR00702 Acriflavin resistance protein family signature 72 95 2.8E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31565 e342120d4c0b55872f94be1289bf10a9 159 SUPERFAMILY SSF82866 32 158 3.66E-32 T 22-04-2016 JE55_RS31565 e342120d4c0b55872f94be1289bf10a9 159 Gene3D G3DSA:1.10.3850.10 18 159 7.2E-41 T 22-04-2016 JE55_RS31565 e342120d4c0b55872f94be1289bf10a9 159 PANTHER PTHR32063 1 159 2.0E-77 T 22-04-2016 JE55_RS31565 e342120d4c0b55872f94be1289bf10a9 159 Pfam PF00873 AcrB/AcrD/AcrF family 1 158 4.5E-57 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS31565 e342120d4c0b55872f94be1289bf10a9 159 PANTHER PTHR32063:SF34 1 159 2.0E-77 T 22-04-2016 JE55_RS05045 388b98132daf3fa59e2d6df96bc3e817 598 Gene3D G3DSA:3.40.50.2000 222 376 3.1E-7 T 22-04-2016 JE55_RS05045 388b98132daf3fa59e2d6df96bc3e817 598 SUPERFAMILY SSF53756 2 397 1.26E-34 T 22-04-2016 JE55_RS05045 388b98132daf3fa59e2d6df96bc3e817 598 Pfam PF00534 Glycosyl transferases group 1 213 346 7.7E-14 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS05045 388b98132daf3fa59e2d6df96bc3e817 598 Pfam PF13946 Domain of unknown function (DUF4214) 507 577 2.5E-17 T 22-04-2016 IPR025282 Domain of unknown function DUF4214 JE55_RS05045 388b98132daf3fa59e2d6df96bc3e817 598 PANTHER PTHR12526 161 399 7.9E-13 T 22-04-2016 JE55_RS05045 388b98132daf3fa59e2d6df96bc3e817 598 PANTHER PTHR12526 1 126 7.9E-13 T 22-04-2016 JE55_RS03820 8b65e12b70e9f71dfd0fc24a9102d997 197 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 32 143 3.7E-32 T 22-04-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 JE55_RS03820 8b65e12b70e9f71dfd0fc24a9102d997 197 SMART SM00830 27 107 7.5E-21 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 JE55_RS03820 8b65e12b70e9f71dfd0fc24a9102d997 197 Pfam PF01817 Chorismate mutase type II 36 104 3.4E-10 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 JE55_RS03820 8b65e12b70e9f71dfd0fc24a9102d997 197 Gene3D G3DSA:1.20.59.10 36 105 8.1E-10 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 JE55_RS03820 8b65e12b70e9f71dfd0fc24a9102d997 197 PIRSF PIRSF026640 2 191 2.0E-69 T 22-04-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 JE55_RS03820 8b65e12b70e9f71dfd0fc24a9102d997 197 SUPERFAMILY SSF48600 31 189 6.26E-44 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 JE55_RS04790 db0a2f98160ae15f2f946d114cd59409 150 Gene3D G3DSA:3.30.700.10 13 60 8.3E-11 T 22-04-2016 JE55_RS04790 db0a2f98160ae15f2f946d114cd59409 150 Pfam PF13633 Prokaryotic N-terminal methylation site 11 36 1.1E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS04790 db0a2f98160ae15f2f946d114cd59409 150 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS04790 db0a2f98160ae15f2f946d114cd59409 150 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 6.6E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS04790 db0a2f98160ae15f2f946d114cd59409 150 SUPERFAMILY SSF54523 13 128 5.02E-19 T 22-04-2016 JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 PANTHER PTHR19211:SF45 1 584 1.5E-220 T 22-04-2016 JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 PANTHER PTHR19211 1 584 1.5E-220 T 22-04-2016 JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 Gene3D G3DSA:3.40.50.300 325 519 1.1E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 SUPERFAMILY SSF52540 130 247 1.48E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 SUPERFAMILY SSF52540 6 94 1.48E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 SUPERFAMILY SSF52540 318 513 2.85E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 Pfam PF12848 ABC transporter 228 302 4.5E-11 T 22-04-2016 IPR032781 ABC-transporter extension domain JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 Pfam PF16326 ABC transporter C-terminal domain 574 643 9.9E-21 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 SMART SM00382 348 519 2.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 SMART SM00382 28 234 8.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 Gene3D G3DSA:3.40.50.300 140 284 2.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 Gene3D G3DSA:3.40.50.300 7 102 2.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 Pfam PF00005 ABC transporter 19 189 6.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS13650 006ea076fa47b5c4a7b9875fe5bf769c 648 Pfam PF00005 ABC transporter 341 473 2.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS06410 72a6364c0d39f265e8e28447296733c4 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 262 5.6E-69 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 JE55_RS06410 72a6364c0d39f265e8e28447296733c4 263 SUPERFAMILY SSF52096 1 263 1.46E-85 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS06410 72a6364c0d39f265e8e28447296733c4 263 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 11 263 2.4E-123 T 22-04-2016 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18|UniPathway: UPA00930 JE55_RS06410 72a6364c0d39f265e8e28447296733c4 263 Gene3D G3DSA:1.10.12.10 205 263 1.3E-23 T 22-04-2016 IPR014748 Crontonase, C-terminal JE55_RS06410 72a6364c0d39f265e8e28447296733c4 263 Gene3D G3DSA:3.90.226.10 2 204 1.3E-64 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS06410 72a6364c0d39f265e8e28447296733c4 263 PANTHER PTHR11941:SF76 3 260 1.2E-102 T 22-04-2016 JE55_RS06410 72a6364c0d39f265e8e28447296733c4 263 PANTHER PTHR11941 3 260 1.2E-102 T 22-04-2016 JE55_RS31705 40ab3c3aade33b437abca33160976ad9 193 Gene3D G3DSA:3.40.50.300 1 127 1.7E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS31705 40ab3c3aade33b437abca33160976ad9 193 SUPERFAMILY SSF52540 1 104 5.84E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 Pfam PF08245 Mur ligase middle domain 116 323 2.1E-52 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 SUPERFAMILY SSF53623 107 341 3.14E-75 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 30 502 6.8E-143 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 SUPERFAMILY SSF53244 344 503 8.7E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 Gene3D G3DSA:3.40.1190.10 107 347 5.1E-84 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 PANTHER PTHR23135:SF4 30 510 8.2E-168 T 22-04-2016 JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 Gene3D G3DSA:3.90.190.20 348 495 1.8E-53 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 12 502 33.012 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 PANTHER PTHR23135 30 510 8.2E-168 T 22-04-2016 JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 SUPERFAMILY SSF63418 29 105 3.53E-12 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 Gene3D G3DSA:3.40.1390.10 29 105 2.0E-12 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06325 3528ee6f20a08b66e4615a30c9117747 514 Pfam PF02875 Mur ligase family, glutamate ligase domain 344 435 4.1E-23 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS17455 cb2f5d2cbe2fd58f28d98d5a8a05a6b0 790 PANTHER PTHR34218 1 777 5.6E-132 T 22-04-2016 JE55_RS17455 cb2f5d2cbe2fd58f28d98d5a8a05a6b0 790 Gene3D G3DSA:1.10.439.10 38 202 1.2E-50 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 JE55_RS17455 cb2f5d2cbe2fd58f28d98d5a8a05a6b0 790 Pfam PF01804 Penicillin amidase 54 777 2.1E-131 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 JE55_RS17455 cb2f5d2cbe2fd58f28d98d5a8a05a6b0 790 Gene3D G3DSA:2.30.120.10 346 396 4.0E-7 T 22-04-2016 JE55_RS17455 cb2f5d2cbe2fd58f28d98d5a8a05a6b0 790 Gene3D G3DSA:3.60.20.10 418 644 1.1E-70 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS17455 cb2f5d2cbe2fd58f28d98d5a8a05a6b0 790 Gene3D G3DSA:3.60.20.10 265 345 1.1E-70 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS17455 cb2f5d2cbe2fd58f28d98d5a8a05a6b0 790 SUPERFAMILY SSF56235 50 781 2.21E-174 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS17455 cb2f5d2cbe2fd58f28d98d5a8a05a6b0 790 PANTHER PTHR34218:SF2 1 777 5.6E-132 T 22-04-2016 JE55_RS17455 cb2f5d2cbe2fd58f28d98d5a8a05a6b0 790 PIRSF PIRSF001227 11 786 3.7E-133 T 22-04-2016 IPR014395 Penicillin acylase GO:0016811 JE55_RS16305 cc91a76b9980961b150846899f7ad850 153 Gene3D G3DSA:3.30.300.70 2 70 4.8E-18 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal JE55_RS16305 cc91a76b9980961b150846899f7ad850 153 PANTHER PTHR33867 2 143 2.6E-34 T 22-04-2016 JE55_RS16305 cc91a76b9980961b150846899f7ad850 153 Gene3D G3DSA:2.30.30.180 77 143 8.0E-16 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal JE55_RS16305 cc91a76b9980961b150846899f7ad850 153 PANTHER PTHR33867:SF1 2 143 2.6E-34 T 22-04-2016 JE55_RS16305 cc91a76b9980961b150846899f7ad850 153 SUPERFAMILY SSF74942 74 146 2.62E-15 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal JE55_RS16305 cc91a76b9980961b150846899f7ad850 153 Pfam PF02576 Putative ribosome maturation factor RimP 6 142 1.9E-35 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 JE55_RS16305 cc91a76b9980961b150846899f7ad850 153 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 1 146 21.646 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 JE55_RS16305 cc91a76b9980961b150846899f7ad850 153 SUPERFAMILY SSF75420 2 73 3.4E-16 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal JE55_RS13930 45c946095d2678051f79d6fc72536a0d 420 Gene3D G3DSA:3.40.50.2000 225 395 1.1E-25 T 22-04-2016 JE55_RS13930 45c946095d2678051f79d6fc72536a0d 420 PANTHER PTHR12526 91 419 3.4E-44 T 22-04-2016 JE55_RS13930 45c946095d2678051f79d6fc72536a0d 420 PANTHER PTHR12526 27 68 3.4E-44 T 22-04-2016 JE55_RS13930 45c946095d2678051f79d6fc72536a0d 420 PANTHER PTHR12526:SF374 91 419 3.4E-44 T 22-04-2016 JE55_RS13930 45c946095d2678051f79d6fc72536a0d 420 PANTHER PTHR12526:SF374 27 68 3.4E-44 T 22-04-2016 JE55_RS13930 45c946095d2678051f79d6fc72536a0d 420 Pfam PF00534 Glycosyl transferases group 1 240 394 1.4E-32 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS13930 45c946095d2678051f79d6fc72536a0d 420 SUPERFAMILY SSF53756 28 418 4.17E-59 T 22-04-2016 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 157 592 7.7E-153 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 Gene3D G3DSA:3.90.100.10 636 758 2.4E-34 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 20 151 9.9E-39 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 SUPERFAMILY SSF55904 614 759 1.83E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 Gene3D G3DSA:3.90.1150.10 468 635 8.4E-70 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 PIRSF PIRSF009393 1 759 5.3E-282 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 SUPERFAMILY SSF53383 157 611 2.76E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 401 415 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 PANTHER PTHR11751:SF406 559 679 4.4E-141 T 22-04-2016 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 PANTHER PTHR11751:SF406 158 499 4.4E-141 T 22-04-2016 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 PANTHER PTHR11751:SF406 527 539 4.4E-141 T 22-04-2016 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 PANTHER PTHR11751 559 679 4.4E-141 T 22-04-2016 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 PANTHER PTHR11751 158 499 4.4E-141 T 22-04-2016 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 PANTHER PTHR11751 527 539 4.4E-141 T 22-04-2016 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 Gene3D G3DSA:3.40.640.10 157 465 2.9E-112 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS13305 5192a89ee820a84da026893de69a92b7 759 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 619 745 1.1E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 JE55_RS17925 53f6d30cfa69d1b680ace417f46e61c1 278 Pfam PF12679 ABC-2 family transporter protein 15 278 5.3E-38 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 JE55_RS17925 53f6d30cfa69d1b680ace417f46e61c1 278 PANTHER PTHR30294:SF26 9 235 6.8E-51 T 22-04-2016 JE55_RS17925 53f6d30cfa69d1b680ace417f46e61c1 278 PANTHER PTHR30294:SF26 252 278 6.8E-51 T 22-04-2016 JE55_RS17925 53f6d30cfa69d1b680ace417f46e61c1 278 PANTHER PTHR30294 9 235 6.8E-51 T 22-04-2016 JE55_RS17925 53f6d30cfa69d1b680ace417f46e61c1 278 PANTHER PTHR30294 252 278 6.8E-51 T 22-04-2016 JE55_RS08465 a94deac496f2621934a9fc64e0ed16ad 295 PANTHER PTHR33375 1 290 1.2E-93 T 22-04-2016 JE55_RS08465 a94deac496f2621934a9fc64e0ed16ad 295 SUPERFAMILY SSF109709 118 224 1.1E-34 T 22-04-2016 JE55_RS08465 a94deac496f2621934a9fc64e0ed16ad 295 SMART SM00470 35 125 3.0E-33 T 22-04-2016 IPR003115 ParB/Sulfiredoxin JE55_RS08465 a94deac496f2621934a9fc64e0ed16ad 295 Gene3D G3DSA:3.90.1530.10 36 131 6.8E-39 T 22-04-2016 JE55_RS08465 a94deac496f2621934a9fc64e0ed16ad 295 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 33 207 5.9E-58 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 JE55_RS08465 a94deac496f2621934a9fc64e0ed16ad 295 SUPERFAMILY SSF110849 37 127 1.23E-28 T 22-04-2016 IPR003115 ParB/Sulfiredoxin JE55_RS08465 a94deac496f2621934a9fc64e0ed16ad 295 Pfam PF02195 ParB-like nuclease domain 39 125 1.3E-26 T 22-04-2016 IPR003115 ParB/Sulfiredoxin JE55_RS14630 72d5f90519cd3bb2639f162bc52e2dfb 575 Gene3D G3DSA:3.30.565.10 465 561 2.1E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS14630 72d5f90519cd3bb2639f162bc52e2dfb 575 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 559 3.8E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS14630 72d5f90519cd3bb2639f162bc52e2dfb 575 SUPERFAMILY SSF55874 429 559 3.27E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS14630 72d5f90519cd3bb2639f162bc52e2dfb 575 PANTHER PTHR24421 361 574 3.9E-45 T 22-04-2016 JE55_RS14630 72d5f90519cd3bb2639f162bc52e2dfb 575 PANTHER PTHR24421 183 336 3.9E-45 T 22-04-2016 JE55_RS14630 72d5f90519cd3bb2639f162bc52e2dfb 575 Pfam PF17158 Membrane-associated sensor, integral membrane domain 52 282 4.4E-29 T 22-04-2016 IPR033424 Membrane-associated sensor domain JE55_RS14630 72d5f90519cd3bb2639f162bc52e2dfb 575 Pfam PF07730 Histidine kinase 366 427 2.8E-12 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 JE55_RS12220 d51735d32cf8df02b98de190705c2571 164 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 4 160 36.558 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 JE55_RS12220 d51735d32cf8df02b98de190705c2571 164 SUPERFAMILY SSF55040 13 157 5.1E-61 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 JE55_RS12220 d51735d32cf8df02b98de190705c2571 164 PANTHER PTHR22960 4 160 1.8E-92 T 22-04-2016 JE55_RS12220 d51735d32cf8df02b98de190705c2571 164 Gene3D G3DSA:3.30.70.640 6 160 1.1E-67 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 JE55_RS12220 d51735d32cf8df02b98de190705c2571 164 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 6 154 1.1E-61 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 JE55_RS12220 d51735d32cf8df02b98de190705c2571 164 Pfam PF01967 MoaC family 17 152 4.1E-55 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 JE55_RS12420 d226f93cadc870c2692849282133a885 154 SUPERFAMILY SSF46785 17 144 1.96E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12420 d226f93cadc870c2692849282133a885 154 PANTHER PTHR33202 11 151 1.0E-42 T 22-04-2016 JE55_RS12420 d226f93cadc870c2692849282133a885 154 Pfam PF01475 Ferric uptake regulator family 21 139 6.0E-11 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 JE55_RS12420 d226f93cadc870c2692849282133a885 154 Gene3D G3DSA:1.10.10.10 16 83 1.4E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12420 d226f93cadc870c2692849282133a885 154 PANTHER PTHR33202:SF6 11 151 1.0E-42 T 22-04-2016 JE55_RS02210 043870bd00edfc4afed8818fa7057705 189 TIGRFAM TIGR01841 phasin: phasin family protein 27 114 2.0E-29 T 22-04-2016 IPR010127 Phasin, subfamily 1 JE55_RS02210 043870bd00edfc4afed8818fa7057705 189 Pfam PF09361 Phasin protein 7 106 3.1E-31 T 22-04-2016 IPR018968 Phasin JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 251 293 4.4E-7 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 273 315 1.8E-5 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 162 202 1.1E-5 T 22-04-2016 IPR022441 Parallel beta-helix repeat-2 JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 PANTHER PTHR22990 31 316 8.5E-17 T 22-04-2016 JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SUPERFAMILY SSF51126 27 389 9.43E-68 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00722 40 188 3.9E-14 T 22-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00722 194 350 8.3 T 22-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 Pfam PF05048 Periplasmic copper-binding protein (NosD) 145 366 4.0E-61 T 22-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00710 190 211 200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00710 234 256 330.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00710 168 189 6.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00710 212 233 5300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00710 279 300 8.5 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00710 257 278 93.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00710 138 167 110.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00710 116 137 1300.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00710 86 114 190.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 SMART SM00710 302 336 8200.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 34 403 5.3E-133 T 22-04-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD JE55_RS17915 4ea70c611874294e8136d28da521d57c 416 Gene3D G3DSA:2.160.20.10 12 332 1.0E-43 T 22-04-2016 IPR012334 Pectin lyase fold JE55_RS12125 81be5f79254336cd529cf15b97d19be5 339 PANTHER PTHR33055:SF2 3 336 9.6E-154 T 22-04-2016 JE55_RS12125 81be5f79254336cd529cf15b97d19be5 339 Pfam PF01548 Transposase 8 145 4.8E-15 T 22-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 JE55_RS12125 81be5f79254336cd529cf15b97d19be5 339 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 292 3.9E-25 T 22-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 JE55_RS12125 81be5f79254336cd529cf15b97d19be5 339 PANTHER PTHR33055 3 336 9.6E-154 T 22-04-2016 JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 Gene3D G3DSA:3.40.190.10 89 190 1.2E-17 T 22-04-2016 JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 PANTHER PTHR30579:SF0 1 258 2.5E-64 T 22-04-2016 JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 PANTHER PTHR30579 1 258 2.5E-64 T 22-04-2016 JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 Pfam PF03466 LysR substrate binding domain 90 268 1.9E-28 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 Gene3D G3DSA:1.10.10.10 6 83 3.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 Gene3D G3DSA:3.40.190.10 191 239 6.3E-6 T 22-04-2016 JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 2.9E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 SUPERFAMILY SSF53850 89 278 2.99E-27 T 22-04-2016 JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15065 b928491f0a017b3144c7210ba7d60956 282 SUPERFAMILY SSF46785 5 112 3.97E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07300 6036a89b565160f3214c6fc80d79fd45 172 Gene3D G3DSA:3.30.230.10 81 165 1.2E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS07300 6036a89b565160f3214c6fc80d79fd45 172 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 16 169 8.4E-65 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 JE55_RS07300 6036a89b565160f3214c6fc80d79fd45 172 SUPERFAMILY SSF54768 13 82 1.15E-22 T 22-04-2016 JE55_RS07300 6036a89b565160f3214c6fc80d79fd45 172 Pfam PF00333 Ribosomal protein S5, N-terminal domain 17 81 1.2E-26 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 JE55_RS07300 6036a89b565160f3214c6fc80d79fd45 172 SUPERFAMILY SSF54211 85 165 1.31E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS07300 6036a89b565160f3214c6fc80d79fd45 172 PANTHER PTHR13718 15 170 1.7E-67 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 JE55_RS07300 6036a89b565160f3214c6fc80d79fd45 172 Pfam PF03719 Ribosomal protein S5, C-terminal domain 92 163 1.3E-28 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 JE55_RS07300 6036a89b565160f3214c6fc80d79fd45 172 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site JE55_RS07300 6036a89b565160f3214c6fc80d79fd45 172 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 169 34.182 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 JE55_RS07300 6036a89b565160f3214c6fc80d79fd45 172 Gene3D G3DSA:3.30.160.20 15 79 5.0E-27 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain JE55_RS05290 fffeae656137e034481df59a32b72bc1 331 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 7 247 6.8E-72 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 JE55_RS05290 fffeae656137e034481df59a32b72bc1 331 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 8 286 3.9E-95 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 JE55_RS05290 fffeae656137e034481df59a32b72bc1 331 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 27 274 4.1E-67 T 22-04-2016 JE55_RS05290 fffeae656137e034481df59a32b72bc1 331 PANTHER PTHR30043:SF4 165 316 3.3E-74 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 JE55_RS05290 fffeae656137e034481df59a32b72bc1 331 PANTHER PTHR30043:SF4 18 131 3.3E-74 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 JE55_RS05290 fffeae656137e034481df59a32b72bc1 331 PANTHER PTHR30043 165 316 3.3E-74 T 22-04-2016 JE55_RS05290 fffeae656137e034481df59a32b72bc1 331 PANTHER PTHR30043 18 131 3.3E-74 T 22-04-2016 JE55_RS05290 fffeae656137e034481df59a32b72bc1 331 SUPERFAMILY SSF53850 46 238 4.29E-33 T 22-04-2016 JE55_RS02965 74f05ec6897e5563da7400c9ac340945 689 Pfam PF05876 Phage terminase large subunit (GpA) 34 603 6.3E-158 T 22-04-2016 IPR008866 Bacteriophage lambda, GpA JE55_RS02965 74f05ec6897e5563da7400c9ac340945 689 Gene3D G3DSA:2.20.25.10 239 285 0.001 T 22-04-2016 JE55_RS07280 1eda58ca3483a79fd8b4c36894811a1d 72 Gene3D G3DSA:2.40.50.140 1 72 1.0E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07280 1eda58ca3483a79fd8b4c36894811a1d 72 PANTHER PTHR33370 1 72 3.5E-47 T 22-04-2016 JE55_RS07280 1eda58ca3483a79fd8b4c36894811a1d 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 1.8E-36 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JE55_RS07280 1eda58ca3483a79fd8b4c36894811a1d 72 SMART SM00316 2 72 0.0041 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS07280 1eda58ca3483a79fd8b4c36894811a1d 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.975 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JE55_RS07280 1eda58ca3483a79fd8b4c36894811a1d 72 SUPERFAMILY SSF50249 1 70 3.92E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07280 1eda58ca3483a79fd8b4c36894811a1d 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.5E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 JE55_RS12765 4a9e960bdf5e22813a437d5eaac75f53 453 Gene3D G3DSA:1.10.580.10 201 320 2.7E-50 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 JE55_RS12765 4a9e960bdf5e22813a437d5eaac75f53 453 Gene3D G3DSA:1.10.580.10 73 157 2.7E-50 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 JE55_RS12765 4a9e960bdf5e22813a437d5eaac75f53 453 Pfam PF12728 Helix-turn-helix domain 4 48 1.0E-6 T 22-04-2016 JE55_RS12765 4a9e960bdf5e22813a437d5eaac75f53 453 PANTHER PTHR11739:SF4 251 450 5.0E-40 T 22-04-2016 JE55_RS12765 4a9e960bdf5e22813a437d5eaac75f53 453 PANTHER PTHR11739 251 450 5.0E-40 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 JE55_RS12765 4a9e960bdf5e22813a437d5eaac75f53 453 Gene3D G3DSA:1.10.230.10 321 404 2.6E-10 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain JE55_RS12765 4a9e960bdf5e22813a437d5eaac75f53 453 SUPERFAMILY SSF46955 4 53 1.42E-7 T 22-04-2016 IPR009061 Putative DNA-binding domain JE55_RS12765 4a9e960bdf5e22813a437d5eaac75f53 453 Gene3D G3DSA:1.10.1660.10 4 51 9.2E-6 T 22-04-2016 JE55_RS12765 4a9e960bdf5e22813a437d5eaac75f53 453 Pfam PF00285 Citrate synthase, C-terminal domain 70 443 2.1E-73 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 JE55_RS12765 4a9e960bdf5e22813a437d5eaac75f53 453 SUPERFAMILY SSF48256 56 170 5.63E-73 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 JE55_RS12765 4a9e960bdf5e22813a437d5eaac75f53 453 SUPERFAMILY SSF48256 209 451 5.63E-73 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 JE55_RS04565 564f4ccddf1ac5a28e2554a382528ff7 378 Gene3D G3DSA:3.20.20.190 39 372 7.7E-93 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 JE55_RS04565 564f4ccddf1ac5a28e2554a382528ff7 378 PANTHER PTHR23344 42 367 7.9E-107 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 JE55_RS04565 564f4ccddf1ac5a28e2554a382528ff7 378 SUPERFAMILY SSF51695 39 372 8.37E-79 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 JE55_RS04565 564f4ccddf1ac5a28e2554a382528ff7 378 PANTHER PTHR23344:SF7 42 367 7.9E-107 T 22-04-2016 JE55_RS04565 564f4ccddf1ac5a28e2554a382528ff7 378 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 45 367 1.6E-50 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 JE55_RS05615 5fc19edb661be541343a3814edceaa99 295 PANTHER PTHR11019 104 278 8.6E-40 T 22-04-2016 JE55_RS05615 5fc19edb661be541343a3814edceaa99 295 SMART SM00342 188 270 3.0E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS05615 5fc19edb661be541343a3814edceaa99 295 Pfam PF12852 Cupin 3 155 5.8E-18 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain JE55_RS05615 5fc19edb661be541343a3814edceaa99 295 SUPERFAMILY SSF46689 224 271 1.43E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS05615 5fc19edb661be541343a3814edceaa99 295 Pfam PF12833 Helix-turn-helix domain 194 272 2.5E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS05615 5fc19edb661be541343a3814edceaa99 295 PANTHER PTHR11019:SF77 104 278 8.6E-40 T 22-04-2016 JE55_RS05615 5fc19edb661be541343a3814edceaa99 295 Gene3D G3DSA:1.10.10.60 226 269 4.1E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS05615 5fc19edb661be541343a3814edceaa99 295 Gene3D G3DSA:1.10.10.60 168 225 2.2E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS05615 5fc19edb661be541343a3814edceaa99 295 SUPERFAMILY SSF46689 171 222 3.44E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS12970 a522f9c1ca734c3b0ee4c884411904ac 222 Pfam PF10042 Uncharacterized conserved protein (DUF2278) 1 210 2.0E-47 T 22-04-2016 IPR019268 Protein of unknown function DUF2278 JE55_RS11120 efaf45a6bb4604420038cf26423b6926 293 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 13 288 3.3E-77 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS11120 efaf45a6bb4604420038cf26423b6926 293 SUPERFAMILY SSF54211 12 161 4.33E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS11120 efaf45a6bb4604420038cf26423b6926 293 Gene3D G3DSA:3.30.70.890 165 291 6.3E-40 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain JE55_RS11120 efaf45a6bb4604420038cf26423b6926 293 PIRSF PIRSF010376 8 290 4.1E-88 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS11120 efaf45a6bb4604420038cf26423b6926 293 Pfam PF00288 GHMP kinases N terminal domain 91 149 3.1E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 JE55_RS11120 efaf45a6bb4604420038cf26423b6926 293 SUPERFAMILY SSF55060 165 291 4.36E-30 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain JE55_RS11120 efaf45a6bb4604420038cf26423b6926 293 PANTHER PTHR20861:SF2 12 288 2.5E-86 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS11120 efaf45a6bb4604420038cf26423b6926 293 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 9 285 32.8 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS11120 efaf45a6bb4604420038cf26423b6926 293 Pfam PF08544 GHMP kinases C terminal 218 273 1.3E-8 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain JE55_RS11120 efaf45a6bb4604420038cf26423b6926 293 PANTHER PTHR20861 12 288 2.5E-86 T 22-04-2016 JE55_RS11120 efaf45a6bb4604420038cf26423b6926 293 Gene3D G3DSA:3.30.230.10 12 163 7.8E-56 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS07970 685dcd415d070c3607582e8cf4cca821 286 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 4.7E-121 T 22-04-2016 IPR022522 Flagellar motor stator, MotA JE55_RS07970 685dcd415d070c3607582e8cf4cca821 286 Pfam PF01618 MotA/TolQ/ExbB proton channel family 139 235 2.1E-9 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 JE55_RS07970 685dcd415d070c3607582e8cf4cca821 286 PANTHER PTHR30433:SF4 1 285 1.8E-160 T 22-04-2016 IPR022522 Flagellar motor stator, MotA JE55_RS07970 685dcd415d070c3607582e8cf4cca821 286 PANTHER PTHR30433 1 285 1.8E-160 T 22-04-2016 JE55_RS07970 685dcd415d070c3607582e8cf4cca821 286 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site JE55_RS13460 18555562aed97bbe0b8571497c57a9de 232 Gene3D G3DSA:2.60.120.10 3 231 3.4E-76 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS13460 18555562aed97bbe0b8571497c57a9de 232 PIRSF PIRSF006232 1 230 1.2E-55 T 22-04-2016 IPR012093 Pirin JE55_RS13460 18555562aed97bbe0b8571497c57a9de 232 PANTHER PTHR13903 4 231 1.9E-108 T 22-04-2016 IPR012093 Pirin JE55_RS13460 18555562aed97bbe0b8571497c57a9de 232 SUPERFAMILY SSF51182 1 231 2.82E-79 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS13460 18555562aed97bbe0b8571497c57a9de 232 PANTHER PTHR13903:SF7 4 231 1.9E-108 T 22-04-2016 JE55_RS13460 18555562aed97bbe0b8571497c57a9de 232 Pfam PF02678 Pirin 12 119 2.1E-37 T 22-04-2016 IPR003829 Pirin, N-terminal domain JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 Pfam PF05594 Haemagluttinin repeat 512 587 0.014 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 Pfam PF05594 Haemagluttinin repeat 1771 1815 0.004 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 Pfam PF05594 Haemagluttinin repeat 938 1018 0.069 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 Pfam PF05594 Haemagluttinin repeat 774 866 34.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 Pfam PF05594 Haemagluttinin repeat 257 354 7.2E-5 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 Pfam PF13332 Haemagluttinin repeat 1917 2055 9.5E-7 T 22-04-2016 IPR025157 Haemagluttinin repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 Pfam PF13332 Haemagluttinin repeat 2302 2480 7.5E-45 T 22-04-2016 IPR025157 Haemagluttinin repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 Pfam PF13332 Haemagluttinin repeat 2069 2221 5.2E-14 T 22-04-2016 IPR025157 Haemagluttinin repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 SUPERFAMILY SSF51126 78 360 2.54E-62 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 6.4E-7 T 22-04-2016 IPR024973 ESPR domain JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 Pfam PF05860 haemagglutination activity domain 84 207 5.2E-29 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 107 204 6.3E-19 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 527 566 0.0018 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 506 546 0.0017 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 766 805 0.11 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 807 846 1.7E-5 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 957 997 0.041 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 729 753 0.3 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 355 390 1.5 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 998 1026 0.91 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 400 420 0.8 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1318 1344 0.099 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 619 658 2.1E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 917 943 0.023 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1202 1240 2.4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 663 695 0.011 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1076 1115 0.032 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 703 727 0.57 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 468 505 0.018 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 547 587 1.2 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 853 873 0.44 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 897 914 2.3 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 486 522 5.9E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 949 976 0.0095 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1124 1153 0.0012 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 321 354 0.052 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1760 1794 1.7 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 SMART SM00912 88 209 3.7E-42 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 PANTHER PTHR32093 1 209 1.5E-43 T 22-04-2016 JE55_RS13570 f614a7d4028e0b51b640b6c19a462eb1 3107 Gene3D G3DSA:2.160.20.10 78 369 3.0E-90 T 22-04-2016 IPR012334 Pectin lyase fold JE55_RS05270 4e207873356f96e99ac643f9be5f5256 408 PANTHER PTHR32479:SF2 14 390 1.5E-118 T 22-04-2016 JE55_RS05270 4e207873356f96e99ac643f9be5f5256 408 Gene3D G3DSA:1.10.1060.10 12 105 2.4E-22 T 22-04-2016 JE55_RS05270 4e207873356f96e99ac643f9be5f5256 408 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS05270 4e207873356f96e99ac643f9be5f5256 408 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 25 36 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS05270 4e207873356f96e99ac643f9be5f5256 408 SUPERFAMILY SSF46548 21 100 8.37E-20 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 JE55_RS05270 4e207873356f96e99ac643f9be5f5256 408 Pfam PF13183 4Fe-4S dicluster domain 22 89 2.7E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS05270 4e207873356f96e99ac643f9be5f5256 408 PIRSF PIRSF000139 8 407 4.3E-119 T 22-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit JE55_RS05270 4e207873356f96e99ac643f9be5f5256 408 Pfam PF02754 Cysteine-rich domain 304 387 4.6E-15 T 22-04-2016 IPR004017 Cysteine-rich domain JE55_RS05270 4e207873356f96e99ac643f9be5f5256 408 Pfam PF02754 Cysteine-rich domain 169 254 3.1E-12 T 22-04-2016 IPR004017 Cysteine-rich domain JE55_RS05270 4e207873356f96e99ac643f9be5f5256 408 PANTHER PTHR32479 14 390 1.5E-118 T 22-04-2016 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 Gene3D G3DSA:3.30.470.10 451 510 3.1E-5 T 22-04-2016 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 PANTHER PTHR11236 390 527 3.7E-118 T 22-04-2016 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 PANTHER PTHR11236 125 336 3.7E-118 T 22-04-2016 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 PRINTS PR00095 Anthranilate synthase component I signature 241 254 2.8E-9 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 PRINTS PR00095 Anthranilate synthase component I signature 227 240 2.8E-9 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 PRINTS PR00095 Anthranilate synthase component I signature 321 335 2.8E-9 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 Gene3D G3DSA:3.20.10.10 544 652 1.1E-28 T 22-04-2016 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 Pfam PF00425 chorismate binding enzyme 125 340 6.0E-70 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 Pfam PF00425 chorismate binding enzyme 381 438 8.5E-7 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 SUPERFAMILY SSF56752 389 660 1.96E-52 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 PANTHER PTHR11236:SF18 390 527 3.7E-118 T 22-04-2016 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 PANTHER PTHR11236:SF18 125 336 3.7E-118 T 22-04-2016 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 SUPERFAMILY SSF56322 27 340 5.89E-82 T 22-04-2016 IPR005801 ADC synthase GO:0009058 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 Gene3D G3DSA:3.60.120.10 18 336 2.0E-130 T 22-04-2016 IPR005801 ADC synthase GO:0009058 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 Gene3D G3DSA:3.60.120.10 390 445 2.0E-130 T 22-04-2016 IPR005801 ADC synthase GO:0009058 JE55_RS05165 e41541857da2c820ad64972a1a46b393 668 Pfam PF01063 Amino-transferase class IV 450 657 9.6E-40 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 JE55_RS02425 d1396f4f544acbbc1a68354f630b95b9 267 SUPERFAMILY SSF53187 6 265 1.95E-79 T 22-04-2016 JE55_RS02425 d1396f4f544acbbc1a68354f630b95b9 267 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 10 265 5.3E-107 T 22-04-2016 IPR010247 N-formylglutamate deformylase JE55_RS02425 d1396f4f544acbbc1a68354f630b95b9 267 Gene3D G3DSA:3.40.630.40 2 265 5.7E-96 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 JE55_RS02425 d1396f4f544acbbc1a68354f630b95b9 267 Pfam PF05013 N-formylglutamate amidohydrolase 18 236 1.5E-69 T 22-04-2016 IPR007709 N-formylglutamate amidohydrolase JE55_RS05965 c3ebfcab89073fd8e83f444984d3b480 256 PANTHER PTHR30400:SF0 19 247 3.7E-68 T 22-04-2016 JE55_RS05965 c3ebfcab89073fd8e83f444984d3b480 256 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 29 253 37.928 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 JE55_RS05965 c3ebfcab89073fd8e83f444984d3b480 256 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 36 252 6.2E-89 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 JE55_RS05965 c3ebfcab89073fd8e83f444984d3b480 256 Gene3D G3DSA:1.10.3810.10 81 249 5.1E-66 T 22-04-2016 JE55_RS05965 c3ebfcab89073fd8e83f444984d3b480 256 PANTHER PTHR30400 19 247 3.7E-68 T 22-04-2016 JE55_RS05965 c3ebfcab89073fd8e83f444984d3b480 256 SUPERFAMILY SSF53955 80 249 3.37E-58 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS05965 c3ebfcab89073fd8e83f444984d3b480 256 Pfam PF00912 Transglycosylase 81 247 4.3E-52 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 PANTHER PTHR30251:SF11 21 247 3.3E-62 T 22-04-2016 JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 SUPERFAMILY SSF49354 20 147 4.19E-36 T 22-04-2016 IPR008962 PapD-like JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 175 238 1.4E-14 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 SUPERFAMILY SSF49584 141 240 3.27E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 PANTHER PTHR30251 21 247 3.3E-62 T 22-04-2016 JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 PRINTS PR00969 Pili chaperone signature 103 120 1.73E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 PRINTS PR00969 Pili chaperone signature 26 35 1.73E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 PRINTS PR00969 Pili chaperone signature 170 185 1.73E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 PRINTS PR00969 Pili chaperone signature 129 144 1.73E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 PRINTS PR00969 Pili chaperone signature 73 94 1.73E-30 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 25 147 2.0E-38 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 Gene3D G3DSA:2.60.40.1070 150 241 7.2E-19 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal JE55_RS17795 f51e3c44e68753795f80e9fdb132daf5 256 Gene3D G3DSA:2.60.40.360 25 148 5.1E-39 T 22-04-2016 IPR008962 PapD-like JE55_RS11430 54fb31ade0f574cccf8929fcbe207e5d 321 SUPERFAMILY SSF55681 24 101 1.36E-24 T 22-04-2016 JE55_RS11430 54fb31ade0f574cccf8929fcbe207e5d 321 SUPERFAMILY SSF55681 129 318 1.36E-24 T 22-04-2016 JE55_RS08225 32c05a2689cf8990d3b4644027873d6d 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 125 8.3E-48 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 JE55_RS08225 32c05a2689cf8990d3b4644027873d6d 126 Gene3D G3DSA:2.40.50.100 7 125 3.0E-47 T 22-04-2016 JE55_RS08225 32c05a2689cf8990d3b4644027873d6d 126 PANTHER PTHR11715 1 125 3.8E-60 T 22-04-2016 IPR002930 Glycine cleavage system H-protein JE55_RS08225 32c05a2689cf8990d3b4644027873d6d 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 30.098 T 22-04-2016 IPR002930 Glycine cleavage system H-protein JE55_RS08225 32c05a2689cf8990d3b4644027873d6d 126 PANTHER PTHR11715:SF12 1 125 3.8E-60 T 22-04-2016 JE55_RS08225 32c05a2689cf8990d3b4644027873d6d 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JE55_RS08225 32c05a2689cf8990d3b4644027873d6d 126 SUPERFAMILY SSF51230 3 125 5.5E-41 T 22-04-2016 IPR011053 Single hybrid motif JE55_RS08225 32c05a2689cf8990d3b4644027873d6d 126 Pfam PF01597 Glycine cleavage H-protein 8 125 1.3E-43 T 22-04-2016 IPR002930 Glycine cleavage system H-protein JE55_RS03420 2db8d4772c76a04e8f3b2c58b9e29b9c 194 PANTHER PTHR10192 2 188 1.3E-76 T 22-04-2016 JE55_RS03420 2db8d4772c76a04e8f3b2c58b9e29b9c 194 SMART SM00852 3 153 6.7E-24 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS03420 2db8d4772c76a04e8f3b2c58b9e29b9c 194 Gene3D G3DSA:3.40.980.10 2 189 6.0E-51 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS03420 2db8d4772c76a04e8f3b2c58b9e29b9c 194 SUPERFAMILY SSF53218 2 189 7.33E-47 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS03420 2db8d4772c76a04e8f3b2c58b9e29b9c 194 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 146 1.2E-35 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS03420 2db8d4772c76a04e8f3b2c58b9e29b9c 194 Pfam PF00994 Probable molybdopterin binding domain 4 146 2.8E-28 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS03420 2db8d4772c76a04e8f3b2c58b9e29b9c 194 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 65 78 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 JE55_RS00995 fbbcb1a50211ee8a1641324056bda1c1 280 PANTHER PTHR28047:SF1 1 233 8.5E-63 T 22-04-2016 JE55_RS00995 fbbcb1a50211ee8a1641324056bda1c1 280 Gene3D G3DSA:3.40.50.1860 150 209 1.5E-4 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS00995 fbbcb1a50211ee8a1641324056bda1c1 280 PANTHER PTHR28047 1 233 8.5E-63 T 22-04-2016 JE55_RS00995 fbbcb1a50211ee8a1641324056bda1c1 280 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 210 1.4E-16 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS00995 fbbcb1a50211ee8a1641324056bda1c1 280 SUPERFAMILY SSF53681 164 210 6.21E-5 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS01435 f322b7a88b216b9b15a27b003116ffe2 347 PANTHER PTHR14226:SF24 85 344 5.0E-77 T 22-04-2016 JE55_RS01435 f322b7a88b216b9b15a27b003116ffe2 347 Gene3D G3DSA:3.40.1090.10 76 248 2.3E-18 T 22-04-2016 JE55_RS01435 f322b7a88b216b9b15a27b003116ffe2 347 PANTHER PTHR14226 85 344 5.0E-77 T 22-04-2016 JE55_RS01435 f322b7a88b216b9b15a27b003116ffe2 347 Pfam PF01734 Patatin-like phospholipase 89 247 8.6E-26 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 JE55_RS01435 f322b7a88b216b9b15a27b003116ffe2 347 SUPERFAMILY SSF52151 59 338 9.68E-67 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 JE55_RS10730 87b4d2d4ce391b946761fb6186137557 321 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 13 295 29.541 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 JE55_RS10730 87b4d2d4ce391b946761fb6186137557 321 Gene3D G3DSA:3.40.50.150 37 295 5.5E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS10730 87b4d2d4ce391b946761fb6186137557 321 Pfam PF08241 Methyltransferase domain 58 171 3.7E-17 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 JE55_RS10730 87b4d2d4ce391b946761fb6186137557 321 PANTHER PTHR13090:SF3 16 94 7.2E-37 T 22-04-2016 JE55_RS10730 87b4d2d4ce391b946761fb6186137557 321 PANTHER PTHR13090:SF3 113 298 7.2E-37 T 22-04-2016 JE55_RS10730 87b4d2d4ce391b946761fb6186137557 321 SUPERFAMILY SSF53335 16 295 7.45E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS10730 87b4d2d4ce391b946761fb6186137557 321 PANTHER PTHR13090 16 94 7.2E-37 T 22-04-2016 JE55_RS10730 87b4d2d4ce391b946761fb6186137557 321 PANTHER PTHR13090 113 298 7.2E-37 T 22-04-2016 JE55_RS10765 6cb254e22b421e45d5cc631d68d8476f 285 Pfam PF00510 Cytochrome c oxidase subunit III 10 284 2.2E-57 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 JE55_RS10765 6cb254e22b421e45d5cc631d68d8476f 285 SUPERFAMILY SSF81452 8 285 3.24E-78 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 JE55_RS10765 6cb254e22b421e45d5cc631d68d8476f 285 PANTHER PTHR11403 1 285 1.6E-92 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 JE55_RS10765 6cb254e22b421e45d5cc631d68d8476f 285 PANTHER PTHR11403:SF0 1 285 1.6E-92 T 22-04-2016 JE55_RS10765 6cb254e22b421e45d5cc631d68d8476f 285 Gene3D G3DSA:1.20.120.80 77 285 7.6E-64 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 JE55_RS10765 6cb254e22b421e45d5cc631d68d8476f 285 Gene3D G3DSA:1.10.287.70 6 72 3.4E-15 T 22-04-2016 JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 Gene3D G3DSA:3.40.190.10 91 175 1.0E-20 T 22-04-2016 JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 PANTHER PTHR30346:SF15 1 301 2.4E-100 T 22-04-2016 JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 Gene3D G3DSA:1.10.10.10 1 83 2.3E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.3E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 SUPERFAMILY SSF53850 90 302 4.24E-41 T 22-04-2016 JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 SUPERFAMILY SSF46785 1 84 3.72E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 Pfam PF03466 LysR substrate binding domain 90 302 8.6E-47 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 PANTHER PTHR30346 1 301 2.4E-100 T 22-04-2016 JE55_RS05380 f11551f6d8237d2f482ce78ec4b33a58 319 Gene3D G3DSA:3.40.190.10 176 279 1.0E-34 T 22-04-2016 JE55_RS16570 3c704b93cffe710a7317b6b4d12890b3 299 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 44 181 2.4E-20 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 JE55_RS16570 3c704b93cffe710a7317b6b4d12890b3 299 Gene3D G3DSA:1.10.101.10 211 252 9.5E-5 T 22-04-2016 IPR002477 Peptidoglycan binding-like JE55_RS16570 3c704b93cffe710a7317b6b4d12890b3 299 PANTHER PTHR30417 40 277 7.7E-80 T 22-04-2016 JE55_RS16570 3c704b93cffe710a7317b6b4d12890b3 299 Gene3D G3DSA:3.40.80.10 32 199 2.8E-56 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 JE55_RS16570 3c704b93cffe710a7317b6b4d12890b3 299 SUPERFAMILY SSF47090 199 278 7.85E-20 T 22-04-2016 IPR002477 Peptidoglycan binding-like JE55_RS16570 3c704b93cffe710a7317b6b4d12890b3 299 SUPERFAMILY SSF55846 26 196 1.96E-52 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 JE55_RS16570 3c704b93cffe710a7317b6b4d12890b3 299 Pfam PF01471 Putative peptidoglycan binding domain 216 265 9.3E-7 T 22-04-2016 IPR002477 Peptidoglycan binding-like JE55_RS16570 3c704b93cffe710a7317b6b4d12890b3 299 SMART SM00644 35 180 5.8E-29 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 213 235 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 SUPERFAMILY SSF51735 121 308 1.12E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 Gene3D G3DSA:3.30.70.260 336 420 2.0E-17 T 22-04-2016 JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 167 194 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 242 258 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 PANTHER PTHR10996 14 382 2.2E-173 T 22-04-2016 JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 SUPERFAMILY SSF52283 26 143 1.62E-34 T 22-04-2016 JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 Gene3D G3DSA:3.40.50.720 133 310 8.6E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 PANTHER PTHR10996:SF18 14 382 2.2E-173 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 SUPERFAMILY SSF55021 347 413 1.01E-9 T 22-04-2016 JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 Gene3D G3DSA:3.40.50.720 23 132 8.2E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 27 339 4.1E-28 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 JE55_RS14615 6946cfd08a7c00bc3e6a77f9287ed70f 424 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 132 307 2.6E-47 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JE55_RS14325 9e01fd7c88e898afa05cad744a77ce98 216 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 7 213 38.647 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 JE55_RS14325 9e01fd7c88e898afa05cad744a77ce98 216 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 7 212 1.1E-71 T 22-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 JE55_RS14325 9e01fd7c88e898afa05cad744a77ce98 216 PANTHER PTHR35809 1 216 1.1E-64 T 22-04-2016 JE55_RS14325 9e01fd7c88e898afa05cad744a77ce98 216 Pfam PF02666 Phosphatidylserine decarboxylase 44 209 1.1E-33 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 Pfam PF12848 ABC transporter 217 292 7.5E-30 T 22-04-2016 IPR032781 ABC-transporter extension domain JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 SUPERFAMILY SSF52540 119 254 1.37E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 SUPERFAMILY SSF52540 2 92 1.37E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 SUPERFAMILY SSF52540 297 517 1.48E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 PANTHER PTHR19211 2 567 0.0 T 22-04-2016 JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 SMART SM00382 342 508 4.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 SMART SM00382 26 225 2.4E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 Gene3D G3DSA:3.40.50.300 310 522 6.6E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 Gene3D G3DSA:3.40.50.300 2 265 2.7E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 PANTHER PTHR19211:SF49 2 567 0.0 T 22-04-2016 JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 Pfam PF00005 ABC transporter 334 464 8.4E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 Pfam PF00005 ABC transporter 18 178 5.2E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS01290 820b319a85905ff4e3cfe06d9065d0f3 646 Pfam PF16326 ABC transporter C-terminal domain 575 636 4.4E-8 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 JE55_RS09730 0c952c25e9077114fdf64fb3f45e2976 215 Pfam PF13410 Glutathione S-transferase, C-terminal domain 145 199 7.0E-6 T 22-04-2016 JE55_RS09730 0c952c25e9077114fdf64fb3f45e2976 215 Gene3D G3DSA:1.20.1050.10 94 205 1.1E-44 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS09730 0c952c25e9077114fdf64fb3f45e2976 215 SUPERFAMILY SSF47616 81 199 3.27E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS09730 0c952c25e9077114fdf64fb3f45e2976 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 80 6.0E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JE55_RS09730 0c952c25e9077114fdf64fb3f45e2976 215 PANTHER PTHR11260:SF144 9 196 1.6E-49 T 22-04-2016 JE55_RS09730 0c952c25e9077114fdf64fb3f45e2976 215 Gene3D G3DSA:3.40.30.10 8 93 1.7E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS09730 0c952c25e9077114fdf64fb3f45e2976 215 SUPERFAMILY SSF52833 7 91 2.11E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS09730 0c952c25e9077114fdf64fb3f45e2976 215 PANTHER PTHR11260 9 196 1.6E-49 T 22-04-2016 JE55_RS00930 0795d946689b363ba4b063a13ec312ce 404 SUPERFAMILY SSF48452 29 96 2.78E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS00930 0795d946689b363ba4b063a13ec312ce 404 Gene3D G3DSA:1.25.40.10 28 88 1.0E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS00930 0795d946689b363ba4b063a13ec312ce 404 Pfam PF13432 Tetratricopeptide repeat 34 88 9.4E-10 T 22-04-2016 JE55_RS17675 0ebb1c0b90a039d6d9b51ebf6e0e9557 318 PANTHER PTHR30466:SF2 3 199 9.7E-44 T 22-04-2016 JE55_RS17675 0ebb1c0b90a039d6d9b51ebf6e0e9557 318 Pfam PF01613 Flavin reductase like domain 20 162 7.2E-38 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 JE55_RS17675 0ebb1c0b90a039d6d9b51ebf6e0e9557 318 SMART SM00903 19 162 4.2E-60 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 JE55_RS17675 0ebb1c0b90a039d6d9b51ebf6e0e9557 318 Gene3D G3DSA:2.30.110.10 7 160 1.5E-56 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS17675 0ebb1c0b90a039d6d9b51ebf6e0e9557 318 SUPERFAMILY SSF50475 10 161 6.87E-49 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS17675 0ebb1c0b90a039d6d9b51ebf6e0e9557 318 PANTHER PTHR30466 3 199 9.7E-44 T 22-04-2016 JE55_RS17375 3c9ddfc91ee8a99c5b6bf40313b89f99 74 SUPERFAMILY SSF160582 2 64 2.88E-23 T 22-04-2016 JE55_RS17375 3c9ddfc91ee8a99c5b6bf40313b89f99 74 SMART SM00923 1 47 1.1E-18 T 22-04-2016 IPR005153 MbtH-like protein JE55_RS17375 3c9ddfc91ee8a99c5b6bf40313b89f99 74 PANTHER PTHR38444 2 67 1.8E-18 T 22-04-2016 JE55_RS17375 3c9ddfc91ee8a99c5b6bf40313b89f99 74 Gene3D G3DSA:3.90.820.10 5 64 2.5E-26 T 22-04-2016 JE55_RS17375 3c9ddfc91ee8a99c5b6bf40313b89f99 74 Pfam PF03621 MbtH-like protein 2 47 8.9E-17 T 22-04-2016 IPR005153 MbtH-like protein JE55_RS07520 ca347fb32b2c43b27d59eb38050bbf32 332 Gene3D G3DSA:1.20.1260.10 37 291 5.9E-104 T 22-04-2016 IPR012347 Ferritin-related JE55_RS07520 ca347fb32b2c43b27d59eb38050bbf32 332 Pfam PF05138 Phenylacetic acid catabolic protein 37 311 4.7E-104 T 22-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 JE55_RS07520 ca347fb32b2c43b27d59eb38050bbf32 332 PANTHER PTHR30458 6 331 5.3E-165 T 22-04-2016 JE55_RS07520 ca347fb32b2c43b27d59eb38050bbf32 332 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 27 315 1.8E-163 T 22-04-2016 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149+1.14.13.14|KEGG: 00940+1.14.13.14|MetaCyc: PWY-5176|UniPathway: UPA00930 JE55_RS07520 ca347fb32b2c43b27d59eb38050bbf32 332 PANTHER PTHR30458:SF0 6 331 5.3E-165 T 22-04-2016 JE55_RS07520 ca347fb32b2c43b27d59eb38050bbf32 332 SUPERFAMILY SSF47240 47 289 3.65E-83 T 22-04-2016 IPR009078 Ferritin-like superfamily JE55_RS17895 aaf9fc6765b7b107bb610457659509aa 340 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS17895 aaf9fc6765b7b107bb610457659509aa 340 PANTHER PTHR24220 32 278 5.5E-75 T 22-04-2016 JE55_RS17895 aaf9fc6765b7b107bb610457659509aa 340 SUPERFAMILY SSF52540 29 248 3.59E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17895 aaf9fc6765b7b107bb610457659509aa 340 SMART SM00382 55 237 6.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS17895 aaf9fc6765b7b107bb610457659509aa 340 Pfam PF00005 ABC transporter 46 189 1.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS17895 aaf9fc6765b7b107bb610457659509aa 340 Gene3D G3DSA:3.40.50.300 23 246 2.2E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12055 fab2362c80af8776e3a53ced2d50d502 605 PIRSF PIRSF028304 1 604 1.4E-211 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like JE55_RS12055 fab2362c80af8776e3a53ced2d50d502 605 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 5 598 3.3E-159 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like JE55_RS12055 fab2362c80af8776e3a53ced2d50d502 605 PANTHER PTHR35370 1 605 3.7E-84 T 22-04-2016 JE55_RS12055 fab2362c80af8776e3a53ced2d50d502 605 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 603 4.2E-168 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like JE55_RS01675 16a262834f2b9e02470ff1faef619b1d 312 SUPERFAMILY SSF48150 134 304 1.71E-41 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 JE55_RS01675 16a262834f2b9e02470ff1faef619b1d 312 SMART SM00478 154 306 2.0E-19 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 JE55_RS01675 16a262834f2b9e02470ff1faef619b1d 312 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 151 290 5.2E-12 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 JE55_RS01675 16a262834f2b9e02470ff1faef619b1d 312 PANTHER PTHR10242 114 303 3.1E-57 T 22-04-2016 JE55_RS01675 16a262834f2b9e02470ff1faef619b1d 312 Gene3D G3DSA:1.10.1670.10 254 307 3.0E-18 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JE55_RS01675 16a262834f2b9e02470ff1faef619b1d 312 PANTHER PTHR10242:SF0 114 303 3.1E-57 T 22-04-2016 JE55_RS01675 16a262834f2b9e02470ff1faef619b1d 312 Gene3D G3DSA:1.10.340.30 146 253 6.6E-30 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 JE55_RS06480 08953da369346b5945dfda0de2d7f5d8 198 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 198 30.374 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 JE55_RS06480 08953da369346b5945dfda0de2d7f5d8 198 SUPERFAMILY SSF52218 1 198 1.23E-54 T 22-04-2016 IPR029039 Flavoprotein-like domain JE55_RS06480 08953da369346b5945dfda0de2d7f5d8 198 PANTHER PTHR10204 1 198 8.4E-78 T 22-04-2016 JE55_RS06480 08953da369346b5945dfda0de2d7f5d8 198 Pfam PF02525 Flavodoxin-like fold 3 196 7.4E-44 T 22-04-2016 IPR003680 Flavodoxin-like fold JE55_RS06480 08953da369346b5945dfda0de2d7f5d8 198 PANTHER PTHR10204:SF16 1 198 8.4E-78 T 22-04-2016 JE55_RS06480 08953da369346b5945dfda0de2d7f5d8 198 Gene3D G3DSA:3.40.50.360 1 197 1.0E-64 T 22-04-2016 IPR029039 Flavoprotein-like domain JE55_RS02730 d6cc72a400b1c3d02a01c53f382b7608 473 Pfam PF04055 Radical SAM superfamily 202 361 9.9E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS02730 d6cc72a400b1c3d02a01c53f382b7608 473 Gene3D G3DSA:3.80.30.20 195 431 3.8E-45 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS02730 d6cc72a400b1c3d02a01c53f382b7608 473 PANTHER PTHR11918 48 389 9.0E-63 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein JE55_RS02730 d6cc72a400b1c3d02a01c53f382b7608 473 SMART SM00729 196 404 1.0E-31 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 JE55_RS02730 d6cc72a400b1c3d02a01c53f382b7608 473 TIGRFAM TIGR03471 HpnJ: hopanoid biosynthesis associated radical SAM protein HpnJ 1 472 5.2E-256 T 22-04-2016 IPR017834 Hopanoid biosynthesis associated radical SAM protein HpnJ JE55_RS02730 d6cc72a400b1c3d02a01c53f382b7608 473 PANTHER PTHR11918:SF64 48 389 9.0E-63 T 22-04-2016 JE55_RS02730 d6cc72a400b1c3d02a01c53f382b7608 473 SUPERFAMILY SSF102114 190 462 5.36E-46 T 22-04-2016 JE55_RS04710 0a77e267491b5fe3a355c1bf23827727 435 Pfam PF09298 Fumarylacetoacetase N-terminal 33 135 3.0E-29 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 JE55_RS04710 0a77e267491b5fe3a355c1bf23827727 435 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 18 432 6.9E-185 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 JE55_RS04710 0a77e267491b5fe3a355c1bf23827727 435 SUPERFAMILY SSF63433 17 135 1.44E-35 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 JE55_RS04710 0a77e267491b5fe3a355c1bf23827727 435 Gene3D G3DSA:2.30.30.230 18 137 1.0E-36 T 22-04-2016 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 JE55_RS04710 0a77e267491b5fe3a355c1bf23827727 435 SUPERFAMILY SSF56529 137 432 3.01E-102 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 JE55_RS04710 0a77e267491b5fe3a355c1bf23827727 435 PANTHER PTHR11820:SF1 13 104 1.7E-186 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 JE55_RS04710 0a77e267491b5fe3a355c1bf23827727 435 PANTHER PTHR11820:SF1 135 433 1.7E-186 T 22-04-2016 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|UniPathway: UPA00139 JE55_RS04710 0a77e267491b5fe3a355c1bf23827727 435 PANTHER PTHR11820 13 104 1.7E-186 T 22-04-2016 JE55_RS04710 0a77e267491b5fe3a355c1bf23827727 435 PANTHER PTHR11820 135 433 1.7E-186 T 22-04-2016 JE55_RS04710 0a77e267491b5fe3a355c1bf23827727 435 Gene3D G3DSA:3.90.850.10 138 425 3.7E-117 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 JE55_RS04710 0a77e267491b5fe3a355c1bf23827727 435 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 141 429 4.7E-58 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 JE55_RS05705 b54521f492aab175e7b240affe04c503 297 PANTHER PTHR30085:SF2 6 295 1.9E-136 T 22-04-2016 JE55_RS05705 b54521f492aab175e7b240affe04c503 297 Gene3D G3DSA:3.40.190.10 33 121 5.2E-29 T 22-04-2016 JE55_RS05705 b54521f492aab175e7b240affe04c503 297 Gene3D G3DSA:3.40.190.10 229 270 5.2E-29 T 22-04-2016 JE55_RS05705 b54521f492aab175e7b240affe04c503 297 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 266 1.6E-52 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS05705 b54521f492aab175e7b240affe04c503 297 PANTHER PTHR30085 6 295 1.9E-136 T 22-04-2016 JE55_RS05705 b54521f492aab175e7b240affe04c503 297 SUPERFAMILY SSF53850 7 269 9.62E-65 T 22-04-2016 JE55_RS05705 b54521f492aab175e7b240affe04c503 297 SMART SM00062 36 268 9.8E-61 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS05705 b54521f492aab175e7b240affe04c503 297 Gene3D G3DSA:3.40.190.10 122 228 4.4E-34 T 22-04-2016 JE55_RS07060 7c5c7d8061d58b20c286b0567107fc05 272 PANTHER PTHR24220 10 256 5.7E-135 T 22-04-2016 JE55_RS07060 7c5c7d8061d58b20c286b0567107fc05 272 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS07060 7c5c7d8061d58b20c286b0567107fc05 272 PANTHER PTHR24220:SF368 10 256 5.7E-135 T 22-04-2016 JE55_RS07060 7c5c7d8061d58b20c286b0567107fc05 272 SUPERFAMILY SSF52540 8 235 6.27E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07060 7c5c7d8061d58b20c286b0567107fc05 272 Pfam PF00005 ABC transporter 24 173 1.6E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS07060 7c5c7d8061d58b20c286b0567107fc05 272 Gene3D G3DSA:3.40.50.300 4 237 6.7E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07060 7c5c7d8061d58b20c286b0567107fc05 272 SMART SM00382 33 222 4.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS00785 05ff9912dc931e90c3fb99365193f9fd 207 SMART SM00155 141 168 0.0018 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 JE55_RS00785 05ff9912dc931e90c3fb99365193f9fd 207 Pfam PF13091 PLD-like domain 74 194 2.0E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain JE55_RS00785 05ff9912dc931e90c3fb99365193f9fd 207 Gene3D G3DSA:3.30.870.10 67 203 3.5E-32 T 22-04-2016 JE55_RS00785 05ff9912dc931e90c3fb99365193f9fd 207 PANTHER PTHR21248 61 199 4.1E-30 T 22-04-2016 JE55_RS00785 05ff9912dc931e90c3fb99365193f9fd 207 SUPERFAMILY SSF56024 62 202 2.47E-33 T 22-04-2016 JE55_RS04660 f5ffce7c425fa10415f640c68c7139d8 407 Pfam PF07690 Major Facilitator Superfamily 229 396 5.4E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS04660 f5ffce7c425fa10415f640c68c7139d8 407 Gene3D G3DSA:1.20.1250.20 23 204 1.4E-12 T 22-04-2016 JE55_RS04660 f5ffce7c425fa10415f640c68c7139d8 407 Gene3D G3DSA:1.20.1250.20 223 396 5.5E-16 T 22-04-2016 JE55_RS04660 f5ffce7c425fa10415f640c68c7139d8 407 PANTHER PTHR23517:SF4 1 399 2.5E-119 T 22-04-2016 JE55_RS04660 f5ffce7c425fa10415f640c68c7139d8 407 Hamap MF_01118 UPF0226 membrane protein . 7 397 30.418 T 22-04-2016 IPR023008 Uncharacterised protein family UPF0226, major facilitator superfamily JE55_RS04660 f5ffce7c425fa10415f640c68c7139d8 407 SUPERFAMILY SSF103473 22 399 1.44E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS04660 f5ffce7c425fa10415f640c68c7139d8 407 PANTHER PTHR23517 1 399 2.5E-119 T 22-04-2016 JE55_RS12300 9f7b470ebccfd98f6777b13f8814a790 341 SUPERFAMILY SSF55821 8 210 2.08E-57 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS12300 9f7b470ebccfd98f6777b13f8814a790 341 Pfam PF03481 Putative GTP-binding controlling metal-binding 202 335 1.5E-20 T 22-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain JE55_RS12300 9f7b470ebccfd98f6777b13f8814a790 341 Pfam PF01300 Telomere recombination 19 199 1.1E-51 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 JE55_RS12300 9f7b470ebccfd98f6777b13f8814a790 341 PANTHER PTHR17490:SF3 1 339 3.8E-82 T 22-04-2016 JE55_RS12300 9f7b470ebccfd98f6777b13f8814a790 341 PANTHER PTHR17490 1 339 3.8E-82 T 22-04-2016 JE55_RS12300 9f7b470ebccfd98f6777b13f8814a790 341 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 210 1.7E-50 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 JE55_RS12300 9f7b470ebccfd98f6777b13f8814a790 341 Gene3D G3DSA:3.90.870.10 8 206 2.3E-72 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS12300 9f7b470ebccfd98f6777b13f8814a790 341 PIRSF PIRSF004930 1 340 2.5E-99 T 22-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 JE55_RS10125 6000a2a88505e6e760cc6d3d20f0ffd5 145 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 133 2.3E-5 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JE55_RS10125 6000a2a88505e6e760cc6d3d20f0ffd5 145 PANTHER PTHR39434:SF1 6 145 2.5E-49 T 22-04-2016 JE55_RS10125 6000a2a88505e6e760cc6d3d20f0ffd5 145 PANTHER PTHR39434 6 145 2.5E-49 T 22-04-2016 JE55_RS10125 6000a2a88505e6e760cc6d3d20f0ffd5 145 Gene3D G3DSA:3.10.180.10 12 137 4.4E-24 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS10125 6000a2a88505e6e760cc6d3d20f0ffd5 145 SUPERFAMILY SSF54593 7 135 1.79E-23 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PANTHER PTHR24322 153 184 1.9E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PANTHER PTHR24322 14 137 1.9E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.6E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.6E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.6E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.6E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.6E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.6E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PANTHER PTHR24322:SF579 153 184 1.9E-46 T 22-04-2016 JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PANTHER PTHR24322:SF579 14 137 1.9E-46 T 22-04-2016 JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 Gene3D G3DSA:3.40.50.720 5 246 6.1E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 SUPERFAMILY SSF51735 9 247 1.08E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 1.2E-58 T 22-04-2016 JE55_RS17025 d0f976c23fc646f33ee2a79a0826dc23 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 188 4.2E-4 T 22-04-2016 JE55_RS05925 6747782ca389c4945d3f8cb8df802693 503 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS05925 6747782ca389c4945d3f8cb8df802693 503 PANTHER PTHR24220 6 378 2.2E-151 T 22-04-2016 JE55_RS05925 6747782ca389c4945d3f8cb8df802693 503 PANTHER PTHR24220:SF416 6 378 2.2E-151 T 22-04-2016 JE55_RS05925 6747782ca389c4945d3f8cb8df802693 503 SUPERFAMILY SSF52540 4 221 1.6E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05925 6747782ca389c4945d3f8cb8df802693 503 SMART SM00382 29 225 5.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS05925 6747782ca389c4945d3f8cb8df802693 503 SMART SM00382 278 474 4.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS05925 6747782ca389c4945d3f8cb8df802693 503 Pfam PF00005 ABC transporter 20 169 2.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS05925 6747782ca389c4945d3f8cb8df802693 503 Pfam PF00005 ABC transporter 272 425 2.1E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS05925 6747782ca389c4945d3f8cb8df802693 503 SUPERFAMILY SSF52540 270 480 1.81E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05925 6747782ca389c4945d3f8cb8df802693 503 Gene3D G3DSA:3.40.50.300 270 480 1.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05925 6747782ca389c4945d3f8cb8df802693 503 Gene3D G3DSA:3.40.50.300 4 227 5.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 SUPERFAMILY SSF81296 699 799 1.68E-25 T 22-04-2016 IPR014756 Immunoglobulin E-set JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 Gene3D G3DSA:2.60.40.10 702 799 1.6E-30 T 22-04-2016 IPR013783 Immunoglobulin-like fold JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 SMART SM00612 399 441 0.0046 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 SMART SM00612 608 660 0.065 T 22-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 Gene3D G3DSA:2.130.10.80 335 701 4.1E-50 T 22-04-2016 IPR015916 Galactose oxidase, beta-propeller JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 249 323 4.6E-9 T 22-04-2016 IPR000772 Ricin B, lectin domain JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 PANTHER PTHR32208:SF31 321 798 4.3E-107 T 22-04-2016 JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 SUPERFAMILY SSF50370 175 313 2.01E-27 T 22-04-2016 IPR000772 Ricin B, lectin domain JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 Gene3D G3DSA:2.80.10.50 197 314 4.5E-18 T 22-04-2016 JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 SUPERFAMILY SSF50965 365 693 4.05E-39 T 22-04-2016 IPR011043 Galactose oxidase/kelch, beta-propeller JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 SUPERFAMILY SSF50370 31 162 9.41E-22 T 22-04-2016 IPR000772 Ricin B, lectin domain JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 PANTHER PTHR32208 321 798 4.3E-107 T 22-04-2016 JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 SMART SM00458 32 167 2.5E-8 T 22-04-2016 IPR000772 Ricin B, lectin domain JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 SMART SM00458 173 315 3.8E-5 T 22-04-2016 IPR000772 Ricin B, lectin domain JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 Pfam PF09118 Domain of unknown function (DUF1929) 701 798 1.9E-23 T 22-04-2016 IPR015202 Domain of unknown function DUF1929 JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 Gene3D G3DSA:2.80.10.50 83 196 3.0E-21 T 22-04-2016 JE55_RS15580 3f5aa0ed4055a6ff7fd1f9091efc1061 800 Pfam PF00652 Ricin-type beta-trefoil lectin domain 43 161 2.5E-14 T 22-04-2016 IPR000772 Ricin B, lectin domain JE55_RS16925 dd85680c42fe66aa198368c02a56360e 247 SUPERFAMILY SSF161098 22 209 3.92E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16925 dd85680c42fe66aa198368c02a56360e 247 PANTHER PTHR30614:SF5 18 231 3.3E-112 T 22-04-2016 JE55_RS16925 dd85680c42fe66aa198368c02a56360e 247 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 219 1.5E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16925 dd85680c42fe66aa198368c02a56360e 247 PANTHER PTHR30614 18 231 3.3E-112 T 22-04-2016 JE55_RS16925 dd85680c42fe66aa198368c02a56360e 247 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 115 1.2E-14 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 JE55_RS16925 dd85680c42fe66aa198368c02a56360e 247 Gene3D G3DSA:1.10.3720.10 25 223 1.4E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 167 8.2E-18 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 PANTHER PTHR30173:SF25 14 292 7.2E-85 T 22-04-2016 JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 SUPERFAMILY SSF54427 175 290 9.01E-14 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 Gene3D G3DSA:3.10.450.50 175 290 3.4E-10 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 Gene3D G3DSA:1.10.1740.10 14 79 2.1E-15 T 22-04-2016 JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 Pfam PF04542 Sigma-70 region 2 15 77 4.3E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 SUPERFAMILY SSF88946 12 74 4.71E-15 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 SUPERFAMILY SSF88659 87 170 4.86E-12 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 Gene3D G3DSA:1.10.10.10 109 166 7.5E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 PANTHER PTHR30173 14 292 7.2E-85 T 22-04-2016 JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 Pfam PF08281 Sigma-70, region 4 117 161 2.7E-12 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS13970 64f26f585c5e9b5de43f6f87a28615a3 297 TIGRFAM TIGR02957 SigX4: RNA polymerase sigma-70 factor, TIGR02957 family 13 292 1.6E-105 T 22-04-2016 IPR014303 RNA polymerase sigma-70, ECF type JE55_RS14230 c82f5553572f0051ca4c8c553106ac20 136 SUPERFAMILY SSF46458 13 135 2.67E-35 T 22-04-2016 IPR009050 Globin-like JE55_RS14230 c82f5553572f0051ca4c8c553106ac20 136 Pfam PF01152 Bacterial-like globin 13 133 2.2E-48 T 22-04-2016 IPR001486 Truncated hemoglobin GO:0019825 JE55_RS14230 c82f5553572f0051ca4c8c553106ac20 136 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 62 86 - T 22-04-2016 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 JE55_RS14230 c82f5553572f0051ca4c8c553106ac20 136 PANTHER PTHR10681 1 134 3.0E-16 T 22-04-2016 JE55_RS14230 c82f5553572f0051ca4c8c553106ac20 136 Gene3D G3DSA:1.10.490.10 11 135 3.9E-44 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 JE55_RS01580 ad4bafa5561ea84fdc5cac0e93023ef2 282 Gene3D G3DSA:3.40.50.150 44 179 3.6E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS01580 ad4bafa5561ea84fdc5cac0e93023ef2 282 Pfam PF13649 Methyltransferase domain 50 142 1.9E-8 T 22-04-2016 JE55_RS01580 ad4bafa5561ea84fdc5cac0e93023ef2 282 SUPERFAMILY SSF53335 39 183 4.22E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS30645 6e2805b01f21574dffe4fc1755ab58bf 68 Gene3D G3DSA:3.10.310.10 2 67 8.0E-13 T 22-04-2016 JE55_RS30645 6e2805b01f21574dffe4fc1755ab58bf 68 SUPERFAMILY SSF54506 2 67 3.14E-9 T 22-04-2016 JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 PANTHER PTHR10359 9 209 5.7E-87 T 22-04-2016 JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 TIGRFAM TIGR01083 nth: endonuclease III 5 194 3.6E-86 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.2E-20 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 PANTHER PTHR10359:SF18 9 209 5.7E-87 T 22-04-2016 JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 SUPERFAMILY SSF48150 3 208 2.67E-73 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 Gene3D G3DSA:1.10.1670.10 123 207 1.1E-36 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 Pfam PF00633 Helix-hairpin-helix motif 100 127 3.5E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 SMART SM00478 38 185 2.0E-56 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.556 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 Gene3D G3DSA:1.10.340.30 23 122 4.7E-36 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 JE55_RS13825 18ec48395254f23ae6f0edc6f87c2f84 214 PIRSF PIRSF001435 1 210 1.6E-54 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 JE55_RS14850 264ee91d9142ae6564be20029519f0cb 374 Pfam PF01292 Prokaryotic cytochrome b561 184 373 7.0E-23 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JE55_RS14850 264ee91d9142ae6564be20029519f0cb 374 PANTHER PTHR30485 178 373 2.4E-49 T 22-04-2016 JE55_RS14850 264ee91d9142ae6564be20029519f0cb 374 Gene3D G3DSA:1.20.950.20 182 374 8.7E-43 T 22-04-2016 JE55_RS14850 264ee91d9142ae6564be20029519f0cb 374 PANTHER PTHR30485:SF1 178 373 2.4E-49 T 22-04-2016 JE55_RS14850 264ee91d9142ae6564be20029519f0cb 374 SUPERFAMILY SSF81342 179 374 5.89E-34 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 SUPERFAMILY SSF51971 142 411 1.53E-67 T 22-04-2016 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 Gene3D G3DSA:3.50.50.60 256 396 3.4E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 PRINTS PR00419 Adrenodoxin reductase family signature 297 311 3.2E-21 T 22-04-2016 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 3.2E-21 T 22-04-2016 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 3.2E-21 T 22-04-2016 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 Gene3D G3DSA:3.50.50.60 397 482 1.8E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 487 6.1E-226 T 22-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 PANTHER PTHR11938 36 330 8.3E-145 T 22-04-2016 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 PANTHER PTHR11938 346 481 8.3E-145 T 22-04-2016 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 Gene3D G3DSA:1.10.1060.10 3 144 1.9E-40 T 22-04-2016 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 SUPERFAMILY SSF51971 375 481 1.12E-11 T 22-04-2016 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 PANTHER PTHR11938:SF75 36 330 8.3E-145 T 22-04-2016 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 PANTHER PTHR11938:SF75 346 481 8.3E-145 T 22-04-2016 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 2.3E-24 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 Gene3D G3DSA:3.50.50.60 145 255 1.1E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 SUPERFAMILY SSF46548 2 154 1.33E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 JE55_RS07105 c8410e95adc63f4a7ad1d97abad876f4 488 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 144 469 2.3E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS17635 7a4486823f71d7ab2087371d51b5b0bf 243 SUPERFAMILY SSF48008 86 214 5.23E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS17635 7a4486823f71d7ab2087371d51b5b0bf 243 SMART SM00895 89 213 1.0E-12 T 22-04-2016 IPR011711 GntR, C-terminal JE55_RS17635 7a4486823f71d7ab2087371d51b5b0bf 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 6.1E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS17635 7a4486823f71d7ab2087371d51b5b0bf 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 6.1E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS17635 7a4486823f71d7ab2087371d51b5b0bf 243 Gene3D G3DSA:1.20.120.530 83 224 1.4E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS17635 7a4486823f71d7ab2087371d51b5b0bf 243 Gene3D G3DSA:1.10.10.10 11 80 5.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17635 7a4486823f71d7ab2087371d51b5b0bf 243 SMART SM00345 21 79 3.9E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS17635 7a4486823f71d7ab2087371d51b5b0bf 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 76 6.8E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS17635 7a4486823f71d7ab2087371d51b5b0bf 243 SUPERFAMILY SSF46785 14 83 2.65E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17635 7a4486823f71d7ab2087371d51b5b0bf 243 Pfam PF07729 FCD domain 89 212 1.8E-21 T 22-04-2016 IPR011711 GntR, C-terminal JE55_RS17635 7a4486823f71d7ab2087371d51b5b0bf 243 PANTHER PTHR11751 18 109 1.2E-20 T 22-04-2016 JE55_RS15795 cdbd2f52aff4f2818cc7477e99277615 527 PANTHER PTHR31956 134 221 3.0E-29 T 22-04-2016 JE55_RS15795 cdbd2f52aff4f2818cc7477e99277615 527 PANTHER PTHR31956 296 494 3.0E-29 T 22-04-2016 JE55_RS15795 cdbd2f52aff4f2818cc7477e99277615 527 PANTHER PTHR31956 29 118 3.0E-29 T 22-04-2016 JE55_RS15795 cdbd2f52aff4f2818cc7477e99277615 527 Gene3D G3DSA:3.40.720.10 339 476 2.3E-6 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 JE55_RS15795 cdbd2f52aff4f2818cc7477e99277615 527 SUPERFAMILY SSF53649 268 480 9.81E-19 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 JE55_RS15795 cdbd2f52aff4f2818cc7477e99277615 527 Pfam PF04185 Phosphoesterase family 35 494 1.9E-112 T 22-04-2016 IPR007312 Phosphoesterase GO:0016788 JE55_RS15795 cdbd2f52aff4f2818cc7477e99277615 527 TIGRFAM TIGR03397 acid_phos_Burk: acid phosphatase, Burkholderia-type 35 523 1.5E-266 T 22-04-2016 IPR017768 Acid phosphatase, AcpA JE55_RS21750 17cf783d7047d35bd306332cb5f492f7 449 Gene3D G3DSA:3.50.50.60 364 439 4.9E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS21750 17cf783d7047d35bd306332cb5f492f7 449 Pfam PF01494 FAD binding domain 364 431 1.1E-16 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 JE55_RS21750 17cf783d7047d35bd306332cb5f492f7 449 PANTHER PTHR13789 337 444 1.6E-16 T 22-04-2016 JE55_RS21750 17cf783d7047d35bd306332cb5f492f7 449 SUPERFAMILY SSF51905 364 442 3.11E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS21750 17cf783d7047d35bd306332cb5f492f7 449 PANTHER PTHR13789:SF90 337 444 1.6E-16 T 22-04-2016 JE55_RS04115 b491d8a14c50346b33c184d125ecf2ae 721 Gene3D G3DSA:3.10.450.50 671 719 1.5E-10 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS04115 b491d8a14c50346b33c184d125ecf2ae 721 SUPERFAMILY SSF103642 700 720 1.64E-6 T 22-04-2016 JE55_RS04115 b491d8a14c50346b33c184d125ecf2ae 721 Pfam PF02810 SEC-C motif 703 720 6.8E-9 T 22-04-2016 IPR004027 SEC-C motif JE55_RS08785 fe055fd3ac24276585ae0975f47d1384 337 PANTHER PTHR30024:SF8 33 287 8.6E-33 T 22-04-2016 JE55_RS08785 fe055fd3ac24276585ae0975f47d1384 337 PANTHER PTHR30024 33 287 8.6E-33 T 22-04-2016 JE55_RS08785 fe055fd3ac24276585ae0975f47d1384 337 SUPERFAMILY SSF53850 33 278 5.59E-36 T 22-04-2016 JE55_RS08785 fe055fd3ac24276585ae0975f47d1384 337 Pfam PF09084 NMT1/THI5 like 52 264 1.1E-25 T 22-04-2016 IPR015168 SsuA/THI5-like JE55_RS08785 fe055fd3ac24276585ae0975f47d1384 337 Gene3D G3DSA:3.40.190.10 120 244 1.6E-16 T 22-04-2016 JE55_RS07380 689d8916ae5385f059edfc725651c795 206 PANTHER PTHR10746 1 205 6.7E-68 T 22-04-2016 IPR013005 50S ribosomal protein uL4 JE55_RS07380 689d8916ae5385f059edfc725651c795 206 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 203 5.5E-69 T 22-04-2016 IPR013005 50S ribosomal protein uL4 JE55_RS07380 689d8916ae5385f059edfc725651c795 206 SUPERFAMILY SSF52166 1 205 4.58E-68 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 JE55_RS07380 689d8916ae5385f059edfc725651c795 206 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 30.986 T 22-04-2016 IPR013005 50S ribosomal protein uL4 JE55_RS07380 689d8916ae5385f059edfc725651c795 206 Gene3D G3DSA:3.40.1370.10 58 205 4.3E-51 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 JE55_RS07380 689d8916ae5385f059edfc725651c795 206 Pfam PF00573 Ribosomal protein L4/L1 family 19 203 3.0E-59 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 JE55_RS12435 68016d65a9baa003f566eea9370b9619 498 SUPERFAMILY SSF51569 20 232 1.83E-70 T 22-04-2016 JE55_RS12435 68016d65a9baa003f566eea9370b9619 498 Gene3D G3DSA:3.20.20.70 254 362 3.3E-144 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS12435 68016d65a9baa003f566eea9370b9619 498 Gene3D G3DSA:3.20.20.70 20 199 3.3E-144 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS12435 68016d65a9baa003f566eea9370b9619 498 Gene3D G3DSA:1.10.400.20 363 478 9.9E-47 T 22-04-2016 JE55_RS12435 68016d65a9baa003f566eea9370b9619 498 SUPERFAMILY SSF51569 249 493 5.27E-79 T 22-04-2016 JE55_RS12435 68016d65a9baa003f566eea9370b9619 498 Pfam PF08013 Tagatose 6 phosphate kinase 249 492 1.8E-96 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 JE55_RS12435 68016d65a9baa003f566eea9370b9619 498 Pfam PF08013 Tagatose 6 phosphate kinase 20 202 4.4E-84 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 JE55_RS12435 68016d65a9baa003f566eea9370b9619 498 PANTHER PTHR32502:SF2 28 196 7.4E-127 T 22-04-2016 JE55_RS12435 68016d65a9baa003f566eea9370b9619 498 PANTHER PTHR32502:SF2 294 497 7.4E-127 T 22-04-2016 JE55_RS12435 68016d65a9baa003f566eea9370b9619 498 PANTHER PTHR32502 28 196 7.4E-127 T 22-04-2016 JE55_RS12435 68016d65a9baa003f566eea9370b9619 498 PANTHER PTHR32502 294 497 7.4E-127 T 22-04-2016 JE55_RS08875 4458222a897df55994c9965383554584 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 6.2E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08875 4458222a897df55994c9965383554584 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 6.2E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08875 4458222a897df55994c9965383554584 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 6.2E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08875 4458222a897df55994c9965383554584 265 PANTHER PTHR24322 151 183 1.7E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08875 4458222a897df55994c9965383554584 265 PANTHER PTHR24322 11 135 1.7E-46 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08875 4458222a897df55994c9965383554584 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08875 4458222a897df55994c9965383554584 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08875 4458222a897df55994c9965383554584 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08875 4458222a897df55994c9965383554584 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08875 4458222a897df55994c9965383554584 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08875 4458222a897df55994c9965383554584 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.4E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08875 4458222a897df55994c9965383554584 265 SUPERFAMILY SSF51735 6 255 3.4E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS08875 4458222a897df55994c9965383554584 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS08875 4458222a897df55994c9965383554584 265 Gene3D G3DSA:3.40.50.720 3 254 7.6E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS08875 4458222a897df55994c9965383554584 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 253 1.5E-60 T 22-04-2016 JE55_RS09790 1ca390a2f0b90c057003743d0936b16f 232 PANTHER PTHR34933 21 232 8.4E-57 T 22-04-2016 JE55_RS09790 1ca390a2f0b90c057003743d0936b16f 232 Hamap MF_00415 Flagellar L-ring protein [flgH]. 11 230 26.483 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JE55_RS09790 1ca390a2f0b90c057003743d0936b16f 232 PANTHER PTHR34933:SF1 21 232 8.4E-57 T 22-04-2016 JE55_RS09790 1ca390a2f0b90c057003743d0936b16f 232 Pfam PF02107 Flagellar L-ring protein 53 231 2.1E-60 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JE55_RS09790 1ca390a2f0b90c057003743d0936b16f 232 PRINTS PR01008 Flagellar L-ring protein signature 172 188 2.0E-30 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JE55_RS09790 1ca390a2f0b90c057003743d0936b16f 232 PRINTS PR01008 Flagellar L-ring protein signature 209 223 2.0E-30 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JE55_RS09790 1ca390a2f0b90c057003743d0936b16f 232 PRINTS PR01008 Flagellar L-ring protein signature 193 207 2.0E-30 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JE55_RS09790 1ca390a2f0b90c057003743d0936b16f 232 PRINTS PR01008 Flagellar L-ring protein signature 146 161 2.0E-30 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JE55_RS09790 1ca390a2f0b90c057003743d0936b16f 232 PRINTS PR01008 Flagellar L-ring protein signature 76 88 2.0E-30 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 JE55_RS05525 20251aea790bcb02d35c20ca0a934ad3 203 Pfam PF13410 Glutathione S-transferase, C-terminal domain 122 188 2.9E-12 T 22-04-2016 JE55_RS05525 20251aea790bcb02d35c20ca0a934ad3 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 2.2E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JE55_RS05525 20251aea790bcb02d35c20ca0a934ad3 203 SUPERFAMILY SSF47616 70 202 2.51E-25 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS05525 20251aea790bcb02d35c20ca0a934ad3 203 PANTHER PTHR11260:SF256 1 202 3.6E-39 T 22-04-2016 JE55_RS05525 20251aea790bcb02d35c20ca0a934ad3 203 PANTHER PTHR11260 1 202 3.6E-39 T 22-04-2016 JE55_RS05525 20251aea790bcb02d35c20ca0a934ad3 203 SUPERFAMILY SSF52833 1 102 7.78E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS05525 20251aea790bcb02d35c20ca0a934ad3 203 Gene3D G3DSA:3.40.30.10 1 90 3.1E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS05525 20251aea790bcb02d35c20ca0a934ad3 203 Gene3D G3DSA:1.20.1050.10 91 202 1.9E-20 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS12660 39e69bdf4240af616ce3fffa73dd5507 107 Pfam PF12112 Protein of unknown function (DUF3579) 7 95 8.3E-39 T 22-04-2016 IPR021969 Protein of unknown function DUF3579 JE55_RS02285 16636178bdaefb6c5244078765e149b1 228 SUPERFAMILY SSF103501 1 227 1.44E-63 T 22-04-2016 IPR023234 NarG-like domain JE55_RS02285 16636178bdaefb6c5244078765e149b1 228 Gene3D G3DSA:1.20.950.20 2 215 2.9E-64 T 22-04-2016 JE55_RS02285 16636178bdaefb6c5244078765e149b1 228 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 228 9.8E-71 T 22-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 JE55_RS02285 16636178bdaefb6c5244078765e149b1 228 PANTHER PTHR30598 1 228 7.3E-76 T 22-04-2016 JE55_RS02285 16636178bdaefb6c5244078765e149b1 228 PANTHER PTHR30598:SF3 1 228 7.3E-76 T 22-04-2016 JE55_RS02285 16636178bdaefb6c5244078765e149b1 228 Pfam PF02665 Nitrate reductase gamma subunit 5 227 3.5E-79 T 22-04-2016 IPR023234 NarG-like domain JE55_RS03210 94ef59bc0d862c7d4af06e7cebf20ff1 240 PANTHER PTHR21091:SF118 59 181 4.3E-24 T 22-04-2016 JE55_RS03210 94ef59bc0d862c7d4af06e7cebf20ff1 240 SUPERFAMILY SSF53790 4 238 1.7E-65 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS03210 94ef59bc0d862c7d4af06e7cebf20ff1 240 Gene3D G3DSA:3.30.950.10 124 239 3.0E-29 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 JE55_RS03210 94ef59bc0d862c7d4af06e7cebf20ff1 240 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 41 213 5.0E-7 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS03210 94ef59bc0d862c7d4af06e7cebf20ff1 240 PIRSF PIRSF005917 1 239 6.6E-53 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS03210 94ef59bc0d862c7d4af06e7cebf20ff1 240 PANTHER PTHR21091 59 181 4.3E-24 T 22-04-2016 JE55_RS09735 78340cbd9539e9099a24454364c5da95 413 Gene3D G3DSA:3.30.460.10 1 127 6.1E-30 T 22-04-2016 JE55_RS09735 78340cbd9539e9099a24454364c5da95 413 PIRSF PIRSF000813 1 411 4.0E-191 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 JE55_RS09735 78340cbd9539e9099a24454364c5da95 413 Gene3D G3DSA:1.10.3090.10 128 365 1.5E-53 T 22-04-2016 JE55_RS09735 78340cbd9539e9099a24454364c5da95 413 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 412 53.411 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 JE55_RS09735 78340cbd9539e9099a24454364c5da95 413 Hamap MF_01262 CCA-adding enzyme [cca]. 1 405 39.042 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 JE55_RS09735 78340cbd9539e9099a24454364c5da95 413 Pfam PF01966 HD domain 235 333 5.1E-7 T 22-04-2016 IPR006674 HD domain JE55_RS09735 78340cbd9539e9099a24454364c5da95 413 SUPERFAMILY SSF81891 128 364 5.49E-52 T 22-04-2016 JE55_RS09735 78340cbd9539e9099a24454364c5da95 413 PANTHER PTHR13734 1 240 9.6E-65 T 22-04-2016 JE55_RS09735 78340cbd9539e9099a24454364c5da95 413 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 154 216 2.1E-11 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain JE55_RS09735 78340cbd9539e9099a24454364c5da95 413 SUPERFAMILY SSF81301 1 125 2.07E-29 T 22-04-2016 JE55_RS09735 78340cbd9539e9099a24454364c5da95 413 Pfam PF01743 Poly A polymerase head domain 3 127 4.4E-16 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 Gene3D G3DSA:3.30.365.10 192 286 7.3E-34 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 23 781 0.0 T 22-04-2016 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 PANTHER PTHR11908 575 784 0.0 T 22-04-2016 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 PANTHER PTHR11908 23 557 0.0 T 22-04-2016 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 165 710 3.9E-197 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 SMART SM01008 37 144 1.0E-47 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 SUPERFAMILY SSF56003 144 779 6.15E-201 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 Gene3D G3DSA:3.30.365.10 288 363 1.4E-18 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 Gene3D G3DSA:3.30.365.10 149 191 1.4E-18 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 PANTHER PTHR11908:SF66 575 784 0.0 T 22-04-2016 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 PANTHER PTHR11908:SF66 23 557 0.0 T 22-04-2016 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 SUPERFAMILY SSF54665 17 145 2.75E-40 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 Gene3D G3DSA:3.90.1170.50 23 143 1.9E-40 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 Gene3D G3DSA:3.30.365.10 456 616 3.8E-53 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 Gene3D G3DSA:3.30.365.10 364 455 9.6E-87 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 Gene3D G3DSA:3.30.365.10 625 778 9.6E-87 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 JE55_RS04650 16e5ef166a5d3d4c8924ed6c732d1c26 787 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 37 144 1.5E-28 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 339 354 3.2E-5 T 22-04-2016 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 3.2E-5 T 22-04-2016 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 PANTHER PTHR13847:SF148 103 229 5.4E-47 T 22-04-2016 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 PANTHER PTHR13847:SF148 246 428 5.4E-47 T 22-04-2016 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 PANTHER PTHR13847:SF148 1 51 5.4E-47 T 22-04-2016 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 Gene3D G3DSA:3.30.9.10 276 367 8.7E-10 T 22-04-2016 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 Gene3D G3DSA:3.30.9.10 130 184 8.7E-10 T 22-04-2016 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 SUPERFAMILY SSF51905 1 55 3.11E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 SUPERFAMILY SSF51905 373 432 3.11E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 SUPERFAMILY SSF51905 101 276 3.11E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 Gene3D G3DSA:3.50.50.60 185 275 1.4E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 Gene3D G3DSA:3.50.50.60 1 65 1.4E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 Gene3D G3DSA:3.50.50.60 104 126 1.4E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 Gene3D G3DSA:3.50.50.60 373 432 1.4E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 Pfam PF01266 FAD dependent oxidoreductase 2 410 1.6E-44 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 PANTHER PTHR13847 103 229 5.4E-47 T 22-04-2016 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 PANTHER PTHR13847 246 428 5.4E-47 T 22-04-2016 JE55_RS00665 47da90c647effbb05edc38b9010041d7 434 PANTHER PTHR13847 1 51 5.4E-47 T 22-04-2016 JE55_RS10575 183b712884105b2e7a1eda0f124639c8 376 PANTHER PTHR10909:SF145 1 353 8.3E-64 T 22-04-2016 JE55_RS10575 183b712884105b2e7a1eda0f124639c8 376 SUPERFAMILY SSF56645 1 223 5.63E-44 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS10575 183b712884105b2e7a1eda0f124639c8 376 Gene3D G3DSA:2.40.110.10 119 224 2.1E-20 T 22-04-2016 JE55_RS10575 183b712884105b2e7a1eda0f124639c8 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 106 3.0E-9 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS10575 183b712884105b2e7a1eda0f124639c8 376 Gene3D G3DSA:1.10.540.10 1 111 1.1E-13 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS10575 183b712884105b2e7a1eda0f124639c8 376 PANTHER PTHR10909 1 353 8.3E-64 T 22-04-2016 JE55_RS10575 183b712884105b2e7a1eda0f124639c8 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 352 1.5E-21 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS10575 183b712884105b2e7a1eda0f124639c8 376 Gene3D G3DSA:1.20.140.10 236 371 3.2E-30 T 22-04-2016 JE55_RS10575 183b712884105b2e7a1eda0f124639c8 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 120 212 3.1E-16 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS10575 183b712884105b2e7a1eda0f124639c8 376 SUPERFAMILY SSF47203 233 371 1.34E-33 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS15160 861a9293b10dc40b36242fee3deda558 148 SUPERFAMILY SSF53098 6 143 3.41E-60 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS15160 861a9293b10dc40b36242fee3deda558 148 Hamap MF_00042 Ribonuclease H [rnhA]. 3 148 35.473 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 JE55_RS15160 861a9293b10dc40b36242fee3deda558 148 PANTHER PTHR10642 5 143 7.0E-59 T 22-04-2016 JE55_RS15160 861a9293b10dc40b36242fee3deda558 148 Gene3D G3DSA:3.30.420.10 5 144 5.5E-63 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS15160 861a9293b10dc40b36242fee3deda558 148 Pfam PF00075 RNase H 6 142 7.6E-52 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 JE55_RS11745 5beda937ee9b486767aac01a0d196e48 270 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 232 242 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site JE55_RS11745 5beda937ee9b486767aac01a0d196e48 270 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 160 264 3.6E-29 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JE55_RS11745 5beda937ee9b486767aac01a0d196e48 270 Gene3D G3DSA:3.40.390.30 136 269 7.5E-41 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 JE55_RS11745 5beda937ee9b486767aac01a0d196e48 270 Pfam PF02130 Uncharacterized protein family UPF0054 143 263 2.2E-28 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JE55_RS11745 5beda937ee9b486767aac01a0d196e48 270 SUPERFAMILY SSF55486 144 269 1.66E-37 T 22-04-2016 JE55_RS11745 5beda937ee9b486767aac01a0d196e48 270 PANTHER PTHR22881 141 270 8.9E-37 T 22-04-2016 JE55_RS11745 5beda937ee9b486767aac01a0d196e48 270 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 122 267 20.619 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 JE55_RS12035 2e48a120c77a611fccf912deaf63ff1c 366 Gene3D G3DSA:3.20.20.120 132 364 2.8E-65 T 22-04-2016 IPR029065 Enolase C-terminal domain-like JE55_RS12035 2e48a120c77a611fccf912deaf63ff1c 366 Gene3D G3DSA:3.30.390.10 6 131 6.9E-35 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JE55_RS12035 2e48a120c77a611fccf912deaf63ff1c 366 SMART SM00922 146 242 1.1E-17 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JE55_RS12035 2e48a120c77a611fccf912deaf63ff1c 366 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 127 5.5E-12 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain JE55_RS12035 2e48a120c77a611fccf912deaf63ff1c 366 PANTHER PTHR13794:SF4 8 366 4.2E-82 T 22-04-2016 JE55_RS12035 2e48a120c77a611fccf912deaf63ff1c 366 SUPERFAMILY SSF54826 9 129 2.36E-27 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JE55_RS12035 2e48a120c77a611fccf912deaf63ff1c 366 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 102 127 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 JE55_RS12035 2e48a120c77a611fccf912deaf63ff1c 366 Pfam PF13378 Enolase C-terminal domain-like 149 359 3.9E-60 T 22-04-2016 IPR029065 Enolase C-terminal domain-like JE55_RS12035 2e48a120c77a611fccf912deaf63ff1c 366 SUPERFAMILY SSF51604 115 365 6.42E-66 T 22-04-2016 IPR029065 Enolase C-terminal domain-like JE55_RS12035 2e48a120c77a611fccf912deaf63ff1c 366 PANTHER PTHR13794 8 366 4.2E-82 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 JE55_RS15040 8b2cdc7c81476b4d8187331f2925df90 145 PANTHER PTHR11527:SF122 9 145 3.8E-25 T 22-04-2016 JE55_RS15040 8b2cdc7c81476b4d8187331f2925df90 145 Gene3D G3DSA:2.60.40.790 8 145 1.9E-33 T 22-04-2016 IPR008978 HSP20-like chaperone JE55_RS15040 8b2cdc7c81476b4d8187331f2925df90 145 SUPERFAMILY SSF49764 5 144 1.18E-34 T 22-04-2016 IPR008978 HSP20-like chaperone JE55_RS15040 8b2cdc7c81476b4d8187331f2925df90 145 PANTHER PTHR11527 9 145 3.8E-25 T 22-04-2016 IPR031107 Small heat shock protein HSP20 JE55_RS15040 8b2cdc7c81476b4d8187331f2925df90 145 Pfam PF00011 Hsp20/alpha crystallin family 48 145 5.7E-18 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 Gene3D G3DSA:3.40.50.1000 95 233 4.9E-38 T 22-04-2016 IPR023214 HAD-like domain JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 Gene3D G3DSA:1.10.150.240 23 94 3.0E-31 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 Pfam PF00702 haloacid dehalogenase-like hydrolase 10 195 3.6E-9 T 22-04-2016 JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 PANTHER PTHR12725 10 215 3.1E-24 T 22-04-2016 JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 11 195 6.2E-29 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 10 211 6.0E-68 T 22-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 167 187 6.4E-24 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 194 207 6.4E-24 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 6.4E-24 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 35 48 6.4E-24 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 165 6.4E-24 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS01370 ddc4c25367605733b7d990621d0b1392 260 SUPERFAMILY SSF56784 9 233 1.19E-46 T 22-04-2016 IPR023214 HAD-like domain JE55_RS09270 0e5f6c5fd1a7a332b35478f373f0a1ca 210 SUPERFAMILY SSF102114 46 128 5.89E-6 T 22-04-2016 JE55_RS09270 0e5f6c5fd1a7a332b35478f373f0a1ca 210 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 210 1.0E-112 T 22-04-2016 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 JE55_RS09270 0e5f6c5fd1a7a332b35478f373f0a1ca 210 Pfam PF13394 4Fe-4S single cluster domain 25 122 6.6E-6 T 22-04-2016 JE55_RS09270 0e5f6c5fd1a7a332b35478f373f0a1ca 210 PIRSF PIRSF000370 1 210 3.5E-39 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 JE55_RS09270 0e5f6c5fd1a7a332b35478f373f0a1ca 210 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 210 34.876 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 JE55_RS09270 0e5f6c5fd1a7a332b35478f373f0a1ca 210 PANTHER PTHR11228 1 173 7.0E-26 T 22-04-2016 JE55_RS09270 0e5f6c5fd1a7a332b35478f373f0a1ca 210 Gene3D G3DSA:3.80.30.10 87 130 3.4E-8 T 22-04-2016 JE55_RS09270 0e5f6c5fd1a7a332b35478f373f0a1ca 210 PANTHER PTHR11228:SF6 1 173 7.0E-26 T 22-04-2016 JE55_RS08370 ddacbf02b49a2c5aa67a2c6246fdaabf 379 Pfam PF13458 Periplasmic binding protein 28 368 2.5E-58 T 22-04-2016 IPR028081 Leucine-binding protein domain JE55_RS08370 ddacbf02b49a2c5aa67a2c6246fdaabf 379 PANTHER PTHR30483 5 370 3.7E-87 T 22-04-2016 JE55_RS08370 ddacbf02b49a2c5aa67a2c6246fdaabf 379 PANTHER PTHR30483:SF20 5 370 3.7E-87 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JE55_RS08370 ddacbf02b49a2c5aa67a2c6246fdaabf 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 2.8E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JE55_RS08370 ddacbf02b49a2c5aa67a2c6246fdaabf 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 28 44 2.8E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JE55_RS08370 ddacbf02b49a2c5aa67a2c6246fdaabf 379 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 93 103 2.8E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JE55_RS08370 ddacbf02b49a2c5aa67a2c6246fdaabf 379 SUPERFAMILY SSF53822 26 373 7.85E-94 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS08370 ddacbf02b49a2c5aa67a2c6246fdaabf 379 Gene3D G3DSA:3.40.50.2300 26 228 1.3E-64 T 22-04-2016 JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 Gene3D G3DSA:3.40.50.300 666 848 6.9E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 SUPERFAMILY SSF50249 220 373 4.28E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 PANTHER PTHR24031 837 853 1.3E-126 T 22-04-2016 JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 PANTHER PTHR24031 476 489 1.3E-126 T 22-04-2016 JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 PANTHER PTHR24031 423 443 1.3E-126 T 22-04-2016 JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 PANTHER PTHR24031 506 814 1.3E-126 T 22-04-2016 JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 Pfam PF00271 Helicase conserved C-terminal domain 692 799 2.7E-16 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 SMART SM00487 472 671 3.1E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 Pfam PF17191 RecG wedge domain 220 370 1.8E-12 T 22-04-2016 IPR033454 RecG, wedge domain JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 Pfam PF00270 DEAD/DEAH box helicase 479 646 3.8E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 Gene3D G3DSA:3.40.50.300 465 665 2.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 PANTHER PTHR24031:SF249 837 853 1.3E-126 T 22-04-2016 JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 PANTHER PTHR24031:SF249 476 489 1.3E-126 T 22-04-2016 JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 PANTHER PTHR24031:SF249 423 443 1.3E-126 T 22-04-2016 JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 PANTHER PTHR24031:SF249 506 814 1.3E-126 T 22-04-2016 JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 SUPERFAMILY SSF52540 595 810 3.97E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 SMART SM00490 716 800 4.4E-19 T 22-04-2016 IPR001650 Helicase, C-terminal JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 235 876 5.2E-215 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 SUPERFAMILY SSF52540 419 665 5.51E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05385 6bd0e7c869d78b52eddd7be4c061798e 904 Gene3D G3DSA:2.40.50.140 248 341 5.4E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS04485 35d275ab03f455e12171a17e35517071 546 Gene3D G3DSA:1.10.560.10 369 518 2.8E-42 T 22-04-2016 IPR027413 GroEL-like equatorial domain JE55_RS04485 35d275ab03f455e12171a17e35517071 546 SUPERFAMILY SSF52029 185 376 1.14E-82 T 22-04-2016 IPR027409 GroEL-like apical domain JE55_RS04485 35d275ab03f455e12171a17e35517071 546 Gene3D G3DSA:1.10.560.10 4 188 7.3E-48 T 22-04-2016 IPR027413 GroEL-like equatorial domain JE55_RS04485 35d275ab03f455e12171a17e35517071 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 PRINTS PR00298 60kDa chaperonin signature 398 419 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 PRINTS PR00298 60kDa chaperonin signature 268 291 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 PRINTS PR00298 60kDa chaperonin signature 83 110 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 PRINTS PR00298 60kDa chaperonin signature 27 53 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 PRINTS PR00298 60kDa chaperonin signature 350 375 8.2E-75 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 542 41.765 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 SUPERFAMILY SSF54849 137 202 1.65E-24 T 22-04-2016 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 PANTHER PTHR11353 2 546 1.4E-250 T 22-04-2016 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 SUPERFAMILY SSF48592 406 521 3.97E-78 T 22-04-2016 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 SUPERFAMILY SSF48592 7 134 3.97E-78 T 22-04-2016 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 8.2E-100 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 JE55_RS04485 35d275ab03f455e12171a17e35517071 546 Gene3D G3DSA:3.50.7.10 189 368 1.6E-99 T 22-04-2016 IPR027409 GroEL-like apical domain JE55_RS04485 35d275ab03f455e12171a17e35517071 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.2E-254 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS01090 bc9a21bdead9ca2c4c6d792d5949a5e5 144 Pfam PF01957 NfeD-like C-terminal, partner-binding 8 139 6.6E-7 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain JE55_RS01555 24daa84a76f078f0ad9edd9203c4eb46 377 SUPERFAMILY SSF51735 8 149 9.28E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS01555 24daa84a76f078f0ad9edd9203c4eb46 377 Gene3D G3DSA:3.40.50.720 8 97 1.9E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14270 51c22a2193577118800a4d04d7f7bf34 239 PANTHER PTHR30055:SF30 3 234 1.1E-34 T 22-04-2016 JE55_RS14270 51c22a2193577118800a4d04d7f7bf34 239 PANTHER PTHR30055 3 234 1.1E-34 T 22-04-2016 JE55_RS14270 51c22a2193577118800a4d04d7f7bf34 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.6E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS14270 51c22a2193577118800a4d04d7f7bf34 239 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.6E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS14270 51c22a2193577118800a4d04d7f7bf34 239 Gene3D G3DSA:1.10.357.10 4 189 2.8E-28 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS14270 51c22a2193577118800a4d04d7f7bf34 239 Pfam PF13972 Bacterial transcriptional repressor 62 208 3.3E-43 T 22-04-2016 IPR025722 Bacterial transcriptional repressor TetR JE55_RS14270 51c22a2193577118800a4d04d7f7bf34 239 SUPERFAMILY SSF46689 5 78 5.13E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS14270 51c22a2193577118800a4d04d7f7bf34 239 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 7.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS16625 a5aa8bb6a960629476b659911cf83e91 165 Hamap MF_00761 UPF0303 protein . 4 155 32.667 T 22-04-2016 IPR010371 Uncharacterised protein family UPF0303 JE55_RS16625 a5aa8bb6a960629476b659911cf83e91 165 Pfam PF03928 Haem-degrading 22 149 6.6E-33 T 22-04-2016 IPR005624 Haem-degrading JE55_RS16625 a5aa8bb6a960629476b659911cf83e91 165 PANTHER PTHR28255:SF1 1 164 4.7E-39 T 22-04-2016 JE55_RS16625 a5aa8bb6a960629476b659911cf83e91 165 PIRSF PIRSF008757 1 164 5.6E-63 T 22-04-2016 IPR010371 Uncharacterised protein family UPF0303 JE55_RS16625 a5aa8bb6a960629476b659911cf83e91 165 PANTHER PTHR28255 1 164 4.7E-39 T 22-04-2016 JE55_RS16625 a5aa8bb6a960629476b659911cf83e91 165 SUPERFAMILY SSF143744 13 151 4.05E-29 T 22-04-2016 JE55_RS08070 e987a536f516c4fe2bf10b7d4c8ff3b5 354 SUPERFAMILY SSF55961 123 313 3.06E-23 T 22-04-2016 JE55_RS08070 e987a536f516c4fe2bf10b7d4c8ff3b5 354 SUPERFAMILY SSF50022 7 120 6.55E-24 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS08070 e987a536f516c4fe2bf10b7d4c8ff3b5 354 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 150 334 1.6E-15 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 JE55_RS08070 e987a536f516c4fe2bf10b7d4c8ff3b5 354 PANTHER PTHR21266:SF2 7 336 2.4E-26 T 22-04-2016 JE55_RS08070 e987a536f516c4fe2bf10b7d4c8ff3b5 354 PANTHER PTHR21266 7 336 2.4E-26 T 22-04-2016 JE55_RS08070 e987a536f516c4fe2bf10b7d4c8ff3b5 354 Pfam PF00355 Rieske [2Fe-2S] domain 11 80 8.3E-14 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS08070 e987a536f516c4fe2bf10b7d4c8ff3b5 354 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 53 75 - T 22-04-2016 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 JE55_RS08070 e987a536f516c4fe2bf10b7d4c8ff3b5 354 Gene3D G3DSA:2.102.10.10 10 111 6.4E-21 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS08070 e987a536f516c4fe2bf10b7d4c8ff3b5 354 Gene3D G3DSA:3.90.380.10 112 185 2.5E-5 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 JE55_RS23795 20cfcd16de2bf3f93bf136a5aaac1b6e 94 PANTHER PTHR30400 2 94 3.5E-16 T 22-04-2016 JE55_RS23795 20cfcd16de2bf3f93bf136a5aaac1b6e 94 Gene3D G3DSA:1.10.3810.10 31 94 1.7E-21 T 22-04-2016 JE55_RS23795 20cfcd16de2bf3f93bf136a5aaac1b6e 94 PANTHER PTHR30400:SF0 2 94 3.5E-16 T 22-04-2016 JE55_RS23795 20cfcd16de2bf3f93bf136a5aaac1b6e 94 SUPERFAMILY SSF53955 30 94 3.66E-18 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS23795 20cfcd16de2bf3f93bf136a5aaac1b6e 94 Pfam PF00912 Transglycosylase 31 94 9.6E-18 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 JE55_RS15155 936c76162ce9f1f6a8b87c0fb5b05df6 240 SUPERFAMILY SSF53098 1 176 3.29E-54 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS15155 936c76162ce9f1f6a8b87c0fb5b05df6 240 Pfam PF00929 Exonuclease 4 165 2.7E-32 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III JE55_RS15155 936c76162ce9f1f6a8b87c0fb5b05df6 240 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 181 3.9E-59 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS15155 936c76162ce9f1f6a8b87c0fb5b05df6 240 Gene3D G3DSA:3.30.420.10 1 175 7.5E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS15155 936c76162ce9f1f6a8b87c0fb5b05df6 240 PANTHER PTHR30231 1 233 1.2E-101 T 22-04-2016 JE55_RS15155 936c76162ce9f1f6a8b87c0fb5b05df6 240 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 234 5.1E-89 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS15155 936c76162ce9f1f6a8b87c0fb5b05df6 240 PANTHER PTHR30231:SF0 1 233 1.2E-101 T 22-04-2016 JE55_RS15155 936c76162ce9f1f6a8b87c0fb5b05df6 240 SMART SM00479 2 174 3.9E-46 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 3 694 39.249 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 Gene3D G3DSA:3.40.50.300 577 666 9.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 Gene3D G3DSA:3.40.50.300 291 393 9.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 PANTHER PTHR11070 5 522 1.3E-276 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 PANTHER PTHR11070 554 669 1.3E-276 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 Pfam PF13361 UvrD-like helicase C-terminal domain 282 645 6.6E-60 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 Gene3D G3DSA:3.40.50.300 193 290 4.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 Gene3D G3DSA:3.40.50.300 3 118 4.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 Gene3D G3DSA:1.10.10.160 122 192 4.6E-15 T 22-04-2016 IPR013986 DExx box DNA helicase domain JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 Gene3D G3DSA:1.10.486.10 394 536 3.3E-37 T 22-04-2016 JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 126 5.2E-36 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 Pfam PF00580 UvrD/REP helicase N-terminal domain 138 276 4.4E-36 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 SUPERFAMILY SSF52540 3 665 3.03E-155 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 PANTHER PTHR11070:SF19 5 522 1.3E-276 T 22-04-2016 JE55_RS08195 ce0e693520107b9a9c82498637008d43 695 PANTHER PTHR11070:SF19 554 669 1.3E-276 T 22-04-2016 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 SMART SM00382 350 494 9.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 Gene3D G3DSA:1.10.8.60 504 586 7.6E-33 T 22-04-2016 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 571 774 2.8E-97 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 SUPERFAMILY SSF88697 13 204 7.7E-52 T 22-04-2016 IPR015947 PUA-like domain JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 TIGRFAM TIGR00763 lon: endopeptidase La 15 773 2.4E-299 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 SUPERFAMILY SSF54211 597 772 6.83E-60 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 675 694 4.1E-56 T 22-04-2016 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 358 377 4.1E-56 T 22-04-2016 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 597 613 4.1E-56 T 22-04-2016 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 705 724 4.1E-56 T 22-04-2016 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 728 746 4.1E-56 T 22-04-2016 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 354 491 4.5E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 Hamap MF_01973 Lon protease [lon]. 14 774 71.498 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 Gene3D G3DSA:3.30.230.10 592 773 3.3E-77 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 678 686 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 203 1.6E-42 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 Gene3D G3DSA:3.40.50.300 313 503 3.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 PANTHER PTHR10046:SF43 11 778 0.0 T 22-04-2016 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 PIRSF PIRSF001174 4 777 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 SMART SM00464 13 205 8.3E-72 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 PANTHER PTHR10046 11 778 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 JE55_RS00730 4cc1990c1d682dab8e5c603858cd7d94 805 SUPERFAMILY SSF52540 315 588 3.51E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15190 20d0f2728775d692c083dffc532e53f4 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 28 212 2.4E-42 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal JE55_RS15190 20d0f2728775d692c083dffc532e53f4 340 SMART SM00342 255 337 1.1E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS15190 20d0f2728775d692c083dffc532e53f4 340 Pfam PF12833 Helix-turn-helix domain 261 338 3.8E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS15190 20d0f2728775d692c083dffc532e53f4 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 321 5.8E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS15190 20d0f2728775d692c083dffc532e53f4 340 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 321 337 5.8E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS15190 20d0f2728775d692c083dffc532e53f4 340 Gene3D G3DSA:1.10.10.60 290 339 5.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS15190 20d0f2728775d692c083dffc532e53f4 340 PANTHER PTHR11019:SF52 212 338 1.5E-27 T 22-04-2016 JE55_RS15190 20d0f2728775d692c083dffc532e53f4 340 SUPERFAMILY SSF46689 290 338 1.16E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS15190 20d0f2728775d692c083dffc532e53f4 340 PANTHER PTHR11019 212 338 1.5E-27 T 22-04-2016 JE55_RS00835 86570df51c9538cf2afc87b638cc0c50 280 Pfam PF00494 Squalene/phytoene synthase 15 266 3.1E-43 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 JE55_RS00835 86570df51c9538cf2afc87b638cc0c50 280 Gene3D G3DSA:1.10.600.10 5 278 2.1E-48 T 22-04-2016 IPR008949 Isoprenoid synthase domain JE55_RS00835 86570df51c9538cf2afc87b638cc0c50 280 SUPERFAMILY SSF48576 5 279 1.73E-56 T 22-04-2016 IPR008949 Isoprenoid synthase domain JE55_RS00835 86570df51c9538cf2afc87b638cc0c50 280 TIGRFAM TIGR03465 HpnD: squalene synthase HpnD 10 278 5.4E-85 T 22-04-2016 IPR017828 Squalene/phytoene synthase HpnD GO:0016117|GO:0016767 JE55_RS00835 86570df51c9538cf2afc87b638cc0c50 280 PANTHER PTHR31480 5 279 9.1E-27 T 22-04-2016 JE55_RS04630 17e0b706be644662966705bdad929bb1 756 Pfam PF00593 TonB dependent receptor 516 737 1.2E-22 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 JE55_RS04630 17e0b706be644662966705bdad929bb1 756 Pfam PF07715 TonB-dependent Receptor Plug Domain 113 215 5.1E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 JE55_RS04630 17e0b706be644662966705bdad929bb1 756 Gene3D G3DSA:2.40.170.20 230 756 1.9E-107 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 JE55_RS04630 17e0b706be644662966705bdad929bb1 756 Gene3D G3DSA:2.170.130.10 79 226 2.9E-34 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 JE55_RS04630 17e0b706be644662966705bdad929bb1 756 PANTHER PTHR32552:SF19 67 87 3.1E-105 T 22-04-2016 JE55_RS04630 17e0b706be644662966705bdad929bb1 756 PANTHER PTHR32552:SF19 103 756 3.1E-105 T 22-04-2016 JE55_RS04630 17e0b706be644662966705bdad929bb1 756 PANTHER PTHR32552 67 87 3.1E-105 T 22-04-2016 JE55_RS04630 17e0b706be644662966705bdad929bb1 756 PANTHER PTHR32552 103 756 3.1E-105 T 22-04-2016 JE55_RS04630 17e0b706be644662966705bdad929bb1 756 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 113 756 6.0E-72 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 JE55_RS04630 17e0b706be644662966705bdad929bb1 756 SUPERFAMILY SSF56935 82 756 2.07E-113 T 22-04-2016 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 15 102 8.0E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 SUPERFAMILY SSF55190 12 122 1.44E-19 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 SUPERFAMILY SSF52374 127 483 3.38E-82 T 22-04-2016 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 SMART SM00836 473 594 1.4E-48 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 Pfam PF00750 tRNA synthetases class I (R) 112 413 2.3E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 Gene3D G3DSA:3.30.1360.70 7 120 3.0E-29 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 SUPERFAMILY SSF47323 468 594 1.44E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 319 340 6.6E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 131 146 6.6E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 170 183 6.6E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 146 162 6.6E-22 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 141 150 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 Hamap MF_00123 Arginine--tRNA ligase [argS]. 11 594 25.119 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 Gene3D G3DSA:3.40.50.620 125 477 1.5E-110 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 Gene3D G3DSA:1.10.730.10 478 594 4.8E-44 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 Pfam PF05746 DALR anticodon binding domain 473 594 2.4E-34 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 11 594 8.3E-122 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 SMART SM01016 11 102 2.3E-31 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 PANTHER PTHR11956:SF6 2 594 3.9E-215 T 22-04-2016 JE55_RS10380 be2b6d079b0bd67e368893f938121055 594 PANTHER PTHR11956 2 594 3.9E-215 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 Pfam PF00702 haloacid dehalogenase-like hydrolase 309 543 1.3E-32 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 74 349 3.7E-34 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 382 617 1.6E-43 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 Pfam PF00122 E1-E2 ATPase 74 304 9.7E-42 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 SUPERFAMILY SSF56784 311 331 3.79E-38 T 22-04-2016 IPR023214 HAD-like domain JE55_RS14185 f63f28a8f16476514401c54b51041096 695 SUPERFAMILY SSF56784 422 580 3.79E-38 T 22-04-2016 IPR023214 HAD-like domain JE55_RS14185 f63f28a8f16476514401c54b51041096 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 564 4.4E-24 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 548 4.4E-24 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 476 486 4.4E-24 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 156 170 4.4E-24 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 313 327 4.4E-24 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 Gene3D G3DSA:3.40.50.1000 299 325 1.3E-34 T 22-04-2016 IPR023214 HAD-like domain JE55_RS14185 f63f28a8f16476514401c54b51041096 695 Gene3D G3DSA:3.40.50.1000 462 577 1.3E-34 T 22-04-2016 IPR023214 HAD-like domain JE55_RS14185 f63f28a8f16476514401c54b51041096 695 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 9 689 0.0 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 PANTHER PTHR24093:SF49 10 600 0.0 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 PANTHER PTHR24093:SF49 638 689 0.0 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 SUPERFAMILY SSF81660 324 463 1.47E-30 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 Gene3D G3DSA:3.40.1110.10 326 461 1.3E-50 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 10 693 41.36 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 SUPERFAMILY SSF81653 121 209 1.83E-21 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 SUPERFAMILY SSF81665 210 307 2.62E-14 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 SUPERFAMILY SSF81665 30 105 2.62E-14 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 PANTHER PTHR24093 10 600 0.0 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 PANTHER PTHR24093 638 689 0.0 T 22-04-2016 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 Gene3D G3DSA:2.70.150.10 47 210 7.4E-25 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 JE55_RS14185 f63f28a8f16476514401c54b51041096 695 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 315 321 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site JE55_RS07100 e6b96cdfd363ce04869d996794a815e6 503 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 440 6.0E-149 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JE55_RS07100 e6b96cdfd363ce04869d996794a815e6 503 PANTHER PTHR30330:SF1 2 473 1.0E-244 T 22-04-2016 JE55_RS07100 e6b96cdfd363ce04869d996794a815e6 503 Pfam PF01235 Sodium:alanine symporter family 54 453 2.9E-151 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JE55_RS07100 e6b96cdfd363ce04869d996794a815e6 503 PANTHER PTHR30330 2 473 1.0E-244 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JE55_RS07100 e6b96cdfd363ce04869d996794a815e6 503 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 89 104 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JE55_RS07100 e6b96cdfd363ce04869d996794a815e6 503 PRINTS PR00175 Sodium/alanine symporter signature 180 198 1.2E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JE55_RS07100 e6b96cdfd363ce04869d996794a815e6 503 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.2E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JE55_RS07100 e6b96cdfd363ce04869d996794a815e6 503 PRINTS PR00175 Sodium/alanine symporter signature 349 371 1.2E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JE55_RS07100 e6b96cdfd363ce04869d996794a815e6 503 PRINTS PR00175 Sodium/alanine symporter signature 409 429 1.2E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JE55_RS07100 e6b96cdfd363ce04869d996794a815e6 503 PRINTS PR00175 Sodium/alanine symporter signature 208 227 1.2E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JE55_RS07100 e6b96cdfd363ce04869d996794a815e6 503 PRINTS PR00175 Sodium/alanine symporter signature 89 111 1.2E-53 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 SUPERFAMILY SSF55021 668 742 3.25E-14 T 22-04-2016 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 Gene3D G3DSA:3.30.70.260 670 741 5.0E-14 T 22-04-2016 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 Pfam PF13291 ACT domain 668 743 7.8E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 SUPERFAMILY SSF81301 200 380 1.46E-62 T 22-04-2016 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 SMART SM00954 243 353 6.4E-68 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 Pfam PF13328 HD domain 18 184 5.4E-49 T 22-04-2016 IPR003607 HD/PDEase domain JE55_RS16175 966813daa6ec13fd25774489203cd099 745 SUPERFAMILY SSF81271 403 469 1.11E-18 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 PANTHER PTHR21262:SF5 122 745 8.1E-268 T 22-04-2016 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 PANTHER PTHR21262:SF5 13 104 8.1E-268 T 22-04-2016 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 PANTHER PTHR21262 122 745 8.1E-268 T 22-04-2016 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 PANTHER PTHR21262 13 104 8.1E-268 T 22-04-2016 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 SUPERFAMILY SSF109604 7 197 9.42E-43 T 22-04-2016 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 Pfam PF02824 TGS domain 411 469 3.0E-20 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 Gene3D G3DSA:3.30.460.10 186 332 7.5E-51 T 22-04-2016 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 23 739 4.3E-170 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 Pfam PF04607 Region found in RelA / SpoT proteins 243 352 4.4E-38 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 JE55_RS16175 966813daa6ec13fd25774489203cd099 745 Gene3D G3DSA:3.10.20.30 411 471 1.6E-20 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS11770 1cab13b6d5203b10efcdeb284e93a500 222 Pfam PF01381 Helix-turn-helix 40 92 5.5E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JE55_RS11770 1cab13b6d5203b10efcdeb284e93a500 222 PANTHER PTHR10245:SF9 7 208 1.8E-46 T 22-04-2016 JE55_RS11770 1cab13b6d5203b10efcdeb284e93a500 222 Gene3D G3DSA:1.10.260.40 36 96 4.0E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS11770 1cab13b6d5203b10efcdeb284e93a500 222 SMART SM00530 39 94 8.4E-13 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JE55_RS11770 1cab13b6d5203b10efcdeb284e93a500 222 SUPERFAMILY SSF51182 79 212 9.9E-14 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS11770 1cab13b6d5203b10efcdeb284e93a500 222 Pfam PF07883 Cupin domain 148 206 3.9E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel JE55_RS11770 1cab13b6d5203b10efcdeb284e93a500 222 SUPERFAMILY SSF47413 35 96 9.29E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS11770 1cab13b6d5203b10efcdeb284e93a500 222 PANTHER PTHR10245 7 208 1.8E-46 T 22-04-2016 JE55_RS11770 1cab13b6d5203b10efcdeb284e93a500 222 Gene3D G3DSA:2.60.120.10 121 213 8.3E-20 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS09365 8da49301adcf2263570541d3952a13a0 204 PANTHER PTHR10108 1 175 6.6E-47 T 22-04-2016 JE55_RS09365 8da49301adcf2263570541d3952a13a0 204 Gene3D G3DSA:3.40.50.150 17 187 2.5E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS09365 8da49301adcf2263570541d3952a13a0 204 Pfam PF07021 Methionine biosynthesis protein MetW 12 199 3.3E-79 T 22-04-2016 IPR010743 Methionine biosynthesis MetW JE55_RS09365 8da49301adcf2263570541d3952a13a0 204 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 12 200 2.6E-80 T 22-04-2016 IPR010743 Methionine biosynthesis MetW JE55_RS09365 8da49301adcf2263570541d3952a13a0 204 SUPERFAMILY SSF53335 12 190 4.99E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS09365 8da49301adcf2263570541d3952a13a0 204 PANTHER PTHR10108:SF831 1 175 6.6E-47 T 22-04-2016 JE55_RS01495 53dd77e79fe1fc90317fa34cd91e61d4 328 Pfam PF13353 4Fe-4S single cluster domain 21 112 7.7E-6 T 22-04-2016 JE55_RS01495 53dd77e79fe1fc90317fa34cd91e61d4 328 SUPERFAMILY SSF102114 5 277 2.88E-66 T 22-04-2016 JE55_RS01495 53dd77e79fe1fc90317fa34cd91e61d4 328 SMART SM00729 14 218 5.6E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 JE55_RS01495 53dd77e79fe1fc90317fa34cd91e61d4 328 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 328 2.1E-103 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS01495 53dd77e79fe1fc90317fa34cd91e61d4 328 Gene3D G3DSA:3.20.20.70 5 287 6.1E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS01495 53dd77e79fe1fc90317fa34cd91e61d4 328 Pfam PF06463 Molybdenum Cofactor Synthesis C 185 312 4.2E-37 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS01495 53dd77e79fe1fc90317fa34cd91e61d4 328 Pfam PF04055 Radical SAM superfamily 19 178 3.2E-23 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS01495 53dd77e79fe1fc90317fa34cd91e61d4 328 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 328 37.824 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS01495 53dd77e79fe1fc90317fa34cd91e61d4 328 PANTHER PTHR22960 1 284 5.6E-104 T 22-04-2016 JE55_RS09830 f771f2085e8535f8b7329cde907ecf42 199 Pfam PF02417 Chromate transporter 19 174 5.2E-30 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 JE55_RS09830 f771f2085e8535f8b7329cde907ecf42 199 PANTHER PTHR33567 15 175 1.6E-24 T 22-04-2016 JE55_RS08865 8018ed0797d05646406641004d8aee84 130 Gene3D G3DSA:3.10.450.50 2 129 9.0E-37 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS08865 8018ed0797d05646406641004d8aee84 130 PANTHER PTHR41252 1 130 4.4E-35 T 22-04-2016 JE55_RS08865 8018ed0797d05646406641004d8aee84 130 SUPERFAMILY SSF54427 1 128 3.07E-40 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS08865 8018ed0797d05646406641004d8aee84 130 Pfam PF12680 SnoaL-like domain 8 114 2.1E-15 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain JE55_RS08795 3ffc8451579f57e3124a01e8c06adab4 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 275 1.4E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS08795 3ffc8451579f57e3124a01e8c06adab4 282 PANTHER PTHR30151:SF18 31 279 2.3E-76 T 22-04-2016 JE55_RS08795 3ffc8451579f57e3124a01e8c06adab4 282 Gene3D G3DSA:1.10.3720.10 80 275 7.1E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS08795 3ffc8451579f57e3124a01e8c06adab4 282 PANTHER PTHR30151 31 279 2.3E-76 T 22-04-2016 JE55_RS08795 3ffc8451579f57e3124a01e8c06adab4 282 SUPERFAMILY SSF161098 82 268 5.76E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS05190 151b0017934d8d27230b22d47a425a9c 135 SMART SM00363 13 74 1.9E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS05190 151b0017934d8d27230b22d47a425a9c 135 Gene3D G3DSA:3.10.290.10 12 110 6.6E-31 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS05190 151b0017934d8d27230b22d47a425a9c 135 SUPERFAMILY SSF55174 12 108 4.71E-27 T 22-04-2016 JE55_RS05190 151b0017934d8d27230b22d47a425a9c 135 Pfam PF01479 S4 domain 14 59 4.3E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS05190 151b0017934d8d27230b22d47a425a9c 135 PIRSF PIRSF016821 10 135 3.7E-40 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 3.8E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.8E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.8E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.8E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 Gene3D G3DSA:3.40.50.720 2 231 5.5E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 PANTHER PTHR24322 5 131 9.7E-80 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 PANTHER PTHR24322 147 179 9.7E-80 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 PANTHER PTHR24322:SF392 5 131 9.7E-80 T 22-04-2016 JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 PANTHER PTHR24322:SF392 147 179 9.7E-80 T 22-04-2016 JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 Pfam PF00106 short chain dehydrogenase 2 186 3.9E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS04825 349c936951458a4a10fc4c496bddfce7 248 SUPERFAMILY SSF51735 2 232 3.36E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00325 5ce67975367e939db2be874de88b1017 85 PANTHER PTHR33359 1 85 2.1E-20 T 22-04-2016 JE55_RS00325 5ce67975367e939db2be874de88b1017 85 SUPERFAMILY SSF54285 1 83 3.92E-21 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JE55_RS00325 5ce67975367e939db2be874de88b1017 85 Pfam PF02597 ThiS family 6 85 1.0E-16 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 JE55_RS00325 5ce67975367e939db2be874de88b1017 85 Gene3D G3DSA:3.10.20.30 1 85 7.6E-25 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS00325 5ce67975367e939db2be874de88b1017 85 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 85 2.4E-23 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 JE55_RS17680 7592eda382ff6f8fcb0a807e2f132feb 294 PANTHER PTHR10992 33 275 3.4E-48 T 22-04-2016 JE55_RS17680 7592eda382ff6f8fcb0a807e2f132feb 294 SUPERFAMILY SSF53474 24 273 1.49E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17680 7592eda382ff6f8fcb0a807e2f132feb 294 Pfam PF12697 Alpha/beta hydrolase family 35 267 7.9E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS17680 7592eda382ff6f8fcb0a807e2f132feb 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 6.6E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS17680 7592eda382ff6f8fcb0a807e2f132feb 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 6.6E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS17680 7592eda382ff6f8fcb0a807e2f132feb 294 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 6.6E-8 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS17680 7592eda382ff6f8fcb0a807e2f132feb 294 Gene3D G3DSA:3.40.50.1820 20 273 9.2E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS09395 87500d4035badd1c43ce08fb5377b66f 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 360 7.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS09395 87500d4035badd1c43ce08fb5377b66f 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 412 7.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS09395 87500d4035badd1c43ce08fb5377b66f 426 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 393 7.6E-7 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS09395 87500d4035badd1c43ce08fb5377b66f 426 SMART SM00388 201 270 4.4E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS09395 87500d4035badd1c43ce08fb5377b66f 426 PANTHER PTHR24423 185 416 2.6E-21 T 22-04-2016 JE55_RS09395 87500d4035badd1c43ce08fb5377b66f 426 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 413 6.2E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09395 87500d4035badd1c43ce08fb5377b66f 426 SUPERFAMILY SSF55874 269 413 4.06E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09395 87500d4035badd1c43ce08fb5377b66f 426 SMART SM00387 307 415 5.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09395 87500d4035badd1c43ce08fb5377b66f 426 Gene3D G3DSA:3.30.565.10 288 416 2.1E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS04855 98c1f410ae2acc46e82a27f799643a8d 170 PANTHER PTHR30128:SF18 64 170 3.1E-48 T 22-04-2016 JE55_RS04855 98c1f410ae2acc46e82a27f799643a8d 170 PRINTS PR01021 OMPA domain signature 98 113 2.0E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS04855 98c1f410ae2acc46e82a27f799643a8d 170 PRINTS PR01021 OMPA domain signature 68 90 2.0E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS04855 98c1f410ae2acc46e82a27f799643a8d 170 PRINTS PR01021 OMPA domain signature 113 129 2.0E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS04855 98c1f410ae2acc46e82a27f799643a8d 170 SUPERFAMILY SSF103088 47 167 2.35E-33 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS04855 98c1f410ae2acc46e82a27f799643a8d 170 Pfam PF00691 OmpA family 67 162 1.2E-19 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS04855 98c1f410ae2acc46e82a27f799643a8d 170 ProSitePatterns PS01068 OmpA-like domain. 100 144 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 JE55_RS04855 98c1f410ae2acc46e82a27f799643a8d 170 PANTHER PTHR30128 64 170 3.1E-48 T 22-04-2016 JE55_RS04855 98c1f410ae2acc46e82a27f799643a8d 170 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 65 168 1.2E-44 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 JE55_RS04855 98c1f410ae2acc46e82a27f799643a8d 170 Gene3D G3DSA:3.30.1330.60 56 167 3.3E-33 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 9.3E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 Pfam PF07702 UTRA domain 89 226 9.4E-34 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 SMART SM00866 89 226 1.1E-33 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 4.8E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 4.8E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 4 231 2.2E-92 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 PANTHER PTHR11751:SF364 4 92 5.9E-33 T 22-04-2016 JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 SUPERFAMILY SSF46785 3 72 2.29E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 Gene3D G3DSA:3.40.1410.10 86 222 3.8E-49 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 SMART SM00345 9 68 1.1E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 SUPERFAMILY SSF64288 58 230 1.26E-42 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 PANTHER PTHR11751 4 92 5.9E-33 T 22-04-2016 JE55_RS02450 e941fab9c032cf58151e8cd8eb798c95 231 Gene3D G3DSA:1.10.10.10 2 76 8.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04455 0e7987b5a3f8d4795acb0a53ad0cfe54 172 Pfam PF00156 Phosphoribosyl transferase domain 31 141 2.7E-18 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 JE55_RS04455 0e7987b5a3f8d4795acb0a53ad0cfe54 172 SUPERFAMILY SSF53271 5 154 5.24E-31 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS04455 0e7987b5a3f8d4795acb0a53ad0cfe54 172 PANTHER PTHR11608 32 142 5.5E-42 T 22-04-2016 JE55_RS04455 0e7987b5a3f8d4795acb0a53ad0cfe54 172 Gene3D G3DSA:3.40.50.2020 5 150 9.6E-33 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS15045 9d99f95d04326f75ffb1d6d2e484931b 115 Pfam PF03860 Domain of Unknown Function (DUF326) 74 92 3.0E-4 T 22-04-2016 IPR005560 Protein of unknown function DUF326 JE55_RS15045 9d99f95d04326f75ffb1d6d2e484931b 115 PANTHER PTHR37310 1 115 1.9E-15 T 22-04-2016 JE55_RS02685 7e10ad7b845b6873ace76d8670644606 352 PANTHER PTHR30420 1 345 1.5E-77 T 22-04-2016 JE55_RS02685 7e10ad7b845b6873ace76d8670644606 352 Gene3D G3DSA:2.40.40.20 277 337 4.2E-8 T 22-04-2016 JE55_RS02685 7e10ad7b845b6873ace76d8670644606 352 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 1.2E-127 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 JE55_RS02685 7e10ad7b845b6873ace76d8670644606 352 Gene3D G3DSA:3.40.630.30 119 181 3.3E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02685 7e10ad7b845b6873ace76d8670644606 352 Gene3D G3DSA:3.40.630.30 4 82 3.3E-5 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02685 7e10ad7b845b6873ace76d8670644606 352 TIGRFAM TIGR03245 arg_AOST_alph: arginine/ornithine succinyltransferase, alpha subunit 3 337 2.3E-166 T 22-04-2016 IPR017651 Arginine/ornithine succinyltransferase, alpha subunit KEGG: 00330+2.3.1.109|UniPathway: UPA00185 JE55_RS02685 7e10ad7b845b6873ace76d8670644606 352 SUPERFAMILY SSF55729 1 337 2.55E-106 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02685 7e10ad7b845b6873ace76d8670644606 352 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 336 8.2E-120 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 Gene3D G3DSA:2.40.110.10 124 224 3.0E-33 T 22-04-2016 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 235 399 2.4E-24 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 Gene3D G3DSA:1.10.540.10 1 121 1.1E-26 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 PANTHER PTHR10909:SF229 1 351 4.9E-150 T 22-04-2016 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 PANTHER PTHR10909:SF229 370 402 4.9E-150 T 22-04-2016 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 SUPERFAMILY SSF47203 235 402 8.83E-25 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 223 3.0E-20 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 SUPERFAMILY SSF56645 2 247 1.44E-71 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 PANTHER PTHR10909 1 351 4.9E-150 T 22-04-2016 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 PANTHER PTHR10909 370 402 4.9E-150 T 22-04-2016 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 120 2.4E-21 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS10570 031535574f30082ba429fdf67094ae4b 402 Gene3D G3DSA:1.20.140.10 225 401 1.6E-31 T 22-04-2016 JE55_RS26355 0e19eab130cf07c31ddb272ec7db35ad 324 Gene3D G3DSA:3.40.50.720 295 324 5.2E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS26355 0e19eab130cf07c31ddb272ec7db35ad 324 Gene3D G3DSA:3.90.226.10 222 279 2.2E-55 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS26355 0e19eab130cf07c31ddb272ec7db35ad 324 Gene3D G3DSA:3.90.226.10 1 187 2.2E-55 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS26355 0e19eab130cf07c31ddb272ec7db35ad 324 PANTHER PTHR23309:SF6 1 324 1.1E-108 T 22-04-2016 JE55_RS26355 0e19eab130cf07c31ddb272ec7db35ad 324 SUPERFAMILY SSF52096 1 294 4.76E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS26355 0e19eab130cf07c31ddb272ec7db35ad 324 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 184 1.3E-27 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 JE55_RS26355 0e19eab130cf07c31ddb272ec7db35ad 324 PANTHER PTHR23309 1 324 1.1E-108 T 22-04-2016 JE55_RS15360 6f624574687aadbc105f4fa8c955c357 541 PANTHER PTHR24095 8 541 8.1E-200 T 22-04-2016 JE55_RS15360 6f624574687aadbc105f4fa8c955c357 541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS15360 6f624574687aadbc105f4fa8c955c357 541 PANTHER PTHR24095:SF117 8 541 8.1E-200 T 22-04-2016 JE55_RS15360 6f624574687aadbc105f4fa8c955c357 541 Pfam PF00501 AMP-binding enzyme 40 444 1.1E-83 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS15360 6f624574687aadbc105f4fa8c955c357 541 Gene3D G3DSA:3.40.50.980 39 198 3.8E-39 T 22-04-2016 JE55_RS15360 6f624574687aadbc105f4fa8c955c357 541 Gene3D G3DSA:3.40.50.980 199 362 3.1E-26 T 22-04-2016 JE55_RS15360 6f624574687aadbc105f4fa8c955c357 541 Pfam PF13193 AMP-binding enzyme C-terminal domain 455 532 3.8E-21 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS15360 6f624574687aadbc105f4fa8c955c357 541 Gene3D G3DSA:3.30.300.30 440 540 1.8E-30 T 22-04-2016 JE55_RS15360 6f624574687aadbc105f4fa8c955c357 541 Gene3D G3DSA:2.30.38.10 363 436 4.4E-20 T 22-04-2016 JE55_RS15360 6f624574687aadbc105f4fa8c955c357 541 SUPERFAMILY SSF56801 12 541 2.22E-144 T 22-04-2016 JE55_RS09410 ece1d0f26d4f129b5fa6ad6a8a351552 178 Gene3D G3DSA:3.60.20.10 7 178 4.1E-83 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS09410 ece1d0f26d4f129b5fa6ad6a8a351552 178 Pfam PF00227 Proteasome subunit 5 175 2.8E-22 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 JE55_RS09410 ece1d0f26d4f129b5fa6ad6a8a351552 178 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 4.0E-83 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JE55_RS09410 ece1d0f26d4f129b5fa6ad6a8a351552 178 PANTHER PTHR32194 1 178 2.9E-119 T 22-04-2016 JE55_RS09410 ece1d0f26d4f129b5fa6ad6a8a351552 178 PIRSF PIRSF039093 1 178 2.1E-85 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JE55_RS09410 ece1d0f26d4f129b5fa6ad6a8a351552 178 SUPERFAMILY SSF56235 3 177 3.87E-58 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS09410 ece1d0f26d4f129b5fa6ad6a8a351552 178 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 41.181 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 JE55_RS11465 0ad757f0c8ab36ac4ec5d8491cb5ea18 414 Gene3D G3DSA:3.40.50.2000 230 392 6.5E-24 T 22-04-2016 JE55_RS11465 0ad757f0c8ab36ac4ec5d8491cb5ea18 414 Pfam PF00534 Glycosyl transferases group 1 241 393 3.0E-32 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS11465 0ad757f0c8ab36ac4ec5d8491cb5ea18 414 PANTHER PTHR12526 148 413 2.7E-53 T 22-04-2016 JE55_RS11465 0ad757f0c8ab36ac4ec5d8491cb5ea18 414 SUPERFAMILY SSF53756 67 412 3.5E-67 T 22-04-2016 JE55_RS14410 98a7b7ddc784450d91a37e9224f529d2 417 PANTHER PTHR11993 3 164 2.4E-239 T 22-04-2016 JE55_RS14410 98a7b7ddc784450d91a37e9224f529d2 417 PANTHER PTHR11993 190 412 2.4E-239 T 22-04-2016 JE55_RS14410 98a7b7ddc784450d91a37e9224f529d2 417 Gene3D G3DSA:1.10.645.10 6 404 7.7E-65 T 22-04-2016 IPR029014 NiFe hydrogenase-like JE55_RS14410 98a7b7ddc784450d91a37e9224f529d2 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 JE55_RS14410 98a7b7ddc784450d91a37e9224f529d2 417 PANTHER PTHR11993:SF10 3 164 2.4E-239 T 22-04-2016 JE55_RS14410 98a7b7ddc784450d91a37e9224f529d2 417 PANTHER PTHR11993:SF10 190 412 2.4E-239 T 22-04-2016 JE55_RS14410 98a7b7ddc784450d91a37e9224f529d2 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 3.2E-123 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 JE55_RS14410 98a7b7ddc784450d91a37e9224f529d2 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 1.0E-186 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 JE55_RS14410 98a7b7ddc784450d91a37e9224f529d2 417 SUPERFAMILY SSF56762 16 417 1.03E-138 T 22-04-2016 IPR029014 NiFe hydrogenase-like JE55_RS14410 98a7b7ddc784450d91a37e9224f529d2 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.601 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 JE55_RS01550 06007320bdd2ffa2ee0ee2850dc54567 375 Pfam PF01757 Acyltransferase family 9 349 6.3E-26 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 JE55_RS01550 06007320bdd2ffa2ee0ee2850dc54567 375 PANTHER PTHR23028 8 367 3.7E-26 T 22-04-2016 JE55_RS01550 06007320bdd2ffa2ee0ee2850dc54567 375 PANTHER PTHR23028:SF53 8 367 3.7E-26 T 22-04-2016 JE55_RS08860 49a9f676771a97ba7244cbdae00983c6 501 PANTHER PTHR11699 2 499 2.2E-244 T 22-04-2016 JE55_RS08860 49a9f676771a97ba7244cbdae00983c6 501 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 273 280 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 JE55_RS08860 49a9f676771a97ba7244cbdae00983c6 501 Gene3D G3DSA:3.40.309.10 288 472 2.9E-74 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS08860 49a9f676771a97ba7244cbdae00983c6 501 Gene3D G3DSA:3.40.605.10 21 287 3.5E-99 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS08860 49a9f676771a97ba7244cbdae00983c6 501 Pfam PF00171 Aldehyde dehydrogenase family 35 497 2.1E-177 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS08860 49a9f676771a97ba7244cbdae00983c6 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 301 312 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 JE55_RS08860 49a9f676771a97ba7244cbdae00983c6 501 SUPERFAMILY SSF53720 18 499 5.89E-175 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS08860 49a9f676771a97ba7244cbdae00983c6 501 PANTHER PTHR11699:SF46 2 499 2.2E-244 T 22-04-2016 JE55_RS14815 76d0a825bc6ad1589ecda2c391babf9d 310 PANTHER PTHR12715:SF17 7 298 5.5E-75 T 22-04-2016 JE55_RS14815 76d0a825bc6ad1589ecda2c391babf9d 310 PANTHER PTHR12715 7 298 5.5E-75 T 22-04-2016 JE55_RS14815 76d0a825bc6ad1589ecda2c391babf9d 310 SUPERFAMILY SSF103481 38 143 6.02E-15 T 22-04-2016 JE55_RS14815 76d0a825bc6ad1589ecda2c391babf9d 310 SUPERFAMILY SSF103481 196 292 2.62E-15 T 22-04-2016 JE55_RS14815 76d0a825bc6ad1589ecda2c391babf9d 310 Pfam PF00892 EamA-like transporter family 162 292 2.9E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS14815 76d0a825bc6ad1589ecda2c391babf9d 310 Pfam PF00892 EamA-like transporter family 6 140 1.8E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 Gene3D G3DSA:1.10.8.60 152 217 1.2E-11 T 22-04-2016 JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 PANTHER PTHR13779:SF7 11 431 6.6E-185 T 22-04-2016 JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 SUPERFAMILY SSF48019 243 425 7.37E-74 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 PANTHER PTHR13779 11 431 6.6E-185 T 22-04-2016 JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 SUPERFAMILY SSF52540 10 227 1.63E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 Pfam PF16193 AAA C-terminal domain 183 258 3.9E-23 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 Gene3D G3DSA:1.20.272.10 240 338 4.4E-44 T 22-04-2016 JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 50 159 2.7E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 SMART SM00382 46 163 3.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 Pfam PF12002 MgsA AAA+ ATPase C terminal 259 425 9.5E-67 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 Gene3D G3DSA:1.10.3710.10 340 433 2.0E-34 T 22-04-2016 JE55_RS03995 a6267119b037a3e659f26beaf097ae1b 436 Gene3D G3DSA:3.40.50.300 10 151 1.1E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS21875 1d10aa92c0215473f717f029f31b0196 149 PANTHER PTHR30562:SF10 1 111 1.9E-13 T 22-04-2016 JE55_RS21875 1d10aa92c0215473f717f029f31b0196 149 SUPERFAMILY SSF82771 31 108 3.27E-6 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily JE55_RS21875 1d10aa92c0215473f717f029f31b0196 149 PANTHER PTHR30562 1 111 1.9E-13 T 22-04-2016 JE55_RS10340 420e7607c3270db741a7c3cb502a9030 359 Pfam PF00753 Metallo-beta-lactamase superfamily 42 269 2.2E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS10340 420e7607c3270db741a7c3cb502a9030 359 PANTHER PTHR11935 160 301 2.2E-39 T 22-04-2016 JE55_RS10340 420e7607c3270db741a7c3cb502a9030 359 PANTHER PTHR11935 14 125 2.2E-39 T 22-04-2016 JE55_RS10340 420e7607c3270db741a7c3cb502a9030 359 Gene3D G3DSA:3.60.15.10 13 300 1.9E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS10340 420e7607c3270db741a7c3cb502a9030 359 SUPERFAMILY SSF56281 15 357 3.79E-67 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS10340 420e7607c3270db741a7c3cb502a9030 359 SMART SM00849 42 269 2.7E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS10340 420e7607c3270db741a7c3cb502a9030 359 PANTHER PTHR11935:SF109 160 301 2.2E-39 T 22-04-2016 JE55_RS10340 420e7607c3270db741a7c3cb502a9030 359 PANTHER PTHR11935:SF109 14 125 2.2E-39 T 22-04-2016 JE55_RS06450 6939d858d0e231ef32c215502a02579c 497 PRINTS PR00095 Anthranilate synthase component I signature 340 353 1.7E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 JE55_RS06450 6939d858d0e231ef32c215502a02579c 497 PRINTS PR00095 Anthranilate synthase component I signature 435 449 1.7E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 JE55_RS06450 6939d858d0e231ef32c215502a02579c 497 PRINTS PR00095 Anthranilate synthase component I signature 420 434 1.7E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 JE55_RS06450 6939d858d0e231ef32c215502a02579c 497 PRINTS PR00095 Anthranilate synthase component I signature 326 339 1.7E-23 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 JE55_RS06450 6939d858d0e231ef32c215502a02579c 497 Gene3D G3DSA:3.60.120.10 13 490 3.0E-176 T 22-04-2016 IPR005801 ADC synthase GO:0009058 JE55_RS06450 6939d858d0e231ef32c215502a02579c 497 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 172 1.8E-35 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 JE55_RS06450 6939d858d0e231ef32c215502a02579c 497 Pfam PF00425 chorismate binding enzyme 221 478 8.4E-94 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal JE55_RS06450 6939d858d0e231ef32c215502a02579c 497 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 25 486 7.5E-166 T 22-04-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 JE55_RS06450 6939d858d0e231ef32c215502a02579c 497 PANTHER PTHR11236 5 491 4.5E-220 T 22-04-2016 JE55_RS06450 6939d858d0e231ef32c215502a02579c 497 PANTHER PTHR11236:SF9 5 491 4.5E-220 T 22-04-2016 JE55_RS06450 6939d858d0e231ef32c215502a02579c 497 SUPERFAMILY SSF56322 14 486 2.49E-156 T 22-04-2016 IPR005801 ADC synthase GO:0009058 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 SMART SM00471 439 586 4.3E-5 T 22-04-2016 IPR003607 HD/PDEase domain JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 SUPERFAMILY SSF81301 33 161 8.41E-23 T 22-04-2016 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 Gene3D G3DSA:1.10.3210.10 413 599 1.2E-24 T 22-04-2016 IPR006674 HD domain JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 PIRSF PIRSF006288 2 858 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 PANTHER PTHR13734 84 677 1.3E-96 T 22-04-2016 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 Pfam PF01909 Nucleotidyltransferase domain 52 102 5.5E-6 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 23 852 1.2E-242 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 SUPERFAMILY SSF55021 786 841 1.15E-10 T 22-04-2016 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 SUPERFAMILY SSF55021 677 738 1.03E-8 T 22-04-2016 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 Gene3D G3DSA:3.30.70.260 786 847 2.2E-13 T 22-04-2016 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 858 326.888 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 PANTHER PTHR13734:SF45 84 677 1.3E-96 T 22-04-2016 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 SUPERFAMILY SSF81593 169 291 6.51E-10 T 22-04-2016 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 Pfam PF08335 GlnD PII-uridylyltransferase 167 306 1.6E-33 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 Pfam PF01966 HD domain 444 550 4.1E-9 T 22-04-2016 IPR006674 HD domain JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 Gene3D G3DSA:3.30.460.10 63 155 5.1E-10 T 22-04-2016 JE55_RS01210 3d575c8483d7e2067873af45d313b02d 858 SUPERFAMILY SSF109604 409 533 9.73E-16 T 22-04-2016 JE55_RS15720 1c9d293d799897f5083e94035e10f241 419 PANTHER PTHR23508 2 417 1.3E-149 T 22-04-2016 JE55_RS15720 1c9d293d799897f5083e94035e10f241 419 PANTHER PTHR23508:SF18 2 417 1.3E-149 T 22-04-2016 JE55_RS15720 1c9d293d799897f5083e94035e10f241 419 Pfam PF07690 Major Facilitator Superfamily 14 315 3.3E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS15720 1c9d293d799897f5083e94035e10f241 419 SUPERFAMILY SSF103473 3 406 6.15E-76 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS15720 1c9d293d799897f5083e94035e10f241 419 Gene3D G3DSA:1.20.1250.20 3 188 1.9E-32 T 22-04-2016 JE55_RS15720 1c9d293d799897f5083e94035e10f241 419 Gene3D G3DSA:1.20.1250.20 228 405 8.7E-22 T 22-04-2016 JE55_RS15720 1c9d293d799897f5083e94035e10f241 419 ProSitePatterns PS00217 Sugar transport proteins signature 2. 101 126 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS00435 7bf87bacc7c185c951ddbfee8d2553f9 124 Gene3D G3DSA:3.30.70.60 1 104 1.2E-43 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 JE55_RS00435 7bf87bacc7c185c951ddbfee8d2553f9 124 PANTHER PTHR21011:SF1 1 124 3.5E-40 T 22-04-2016 JE55_RS00435 7bf87bacc7c185c951ddbfee8d2553f9 124 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 4.1E-35 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS00435 7bf87bacc7c185c951ddbfee8d2553f9 124 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.132 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS00435 7bf87bacc7c185c951ddbfee8d2553f9 124 PANTHER PTHR21011 1 124 3.5E-40 T 22-04-2016 JE55_RS00435 7bf87bacc7c185c951ddbfee8d2553f9 124 SUPERFAMILY SSF54995 1 104 1.23E-38 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS00435 7bf87bacc7c185c951ddbfee8d2553f9 124 Pfam PF01250 Ribosomal protein S6 3 91 2.1E-29 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS09265 f546c787eebf5e7980dc7d79ec2fd0cb 244 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 8 239 50.492 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 JE55_RS09265 f546c787eebf5e7980dc7d79ec2fd0cb 244 PANTHER PTHR11587:SF3 10 233 2.8E-74 T 22-04-2016 JE55_RS09265 f546c787eebf5e7980dc7d79ec2fd0cb 244 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 10 226 9.0E-60 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 JE55_RS09265 f546c787eebf5e7980dc7d79ec2fd0cb 244 Gene3D G3DSA:3.40.50.620 9 233 3.9E-74 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS09265 f546c787eebf5e7980dc7d79ec2fd0cb 244 SUPERFAMILY SSF52402 8 233 6.84E-53 T 22-04-2016 JE55_RS09265 f546c787eebf5e7980dc7d79ec2fd0cb 244 Pfam PF06508 Queuosine biosynthesis protein QueC 10 233 4.4E-72 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 JE55_RS09265 f546c787eebf5e7980dc7d79ec2fd0cb 244 PANTHER PTHR11587 10 233 2.8E-74 T 22-04-2016 JE55_RS09265 f546c787eebf5e7980dc7d79ec2fd0cb 244 PIRSF PIRSF006293 6 244 4.5E-78 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 JE55_RS07250 31c0c4d2d53d413024f5943803b9cc35 131 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 1.6E-42 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07250 31c0c4d2d53d413024f5943803b9cc35 131 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.409 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07250 31c0c4d2d53d413024f5943803b9cc35 131 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07250 31c0c4d2d53d413024f5943803b9cc35 131 Pfam PF01196 Ribosomal protein L17 20 115 2.1E-33 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07250 31c0c4d2d53d413024f5943803b9cc35 131 SUPERFAMILY SSF64263 1 119 4.45E-50 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07250 31c0c4d2d53d413024f5943803b9cc35 131 PANTHER PTHR14413 1 119 6.0E-62 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07250 31c0c4d2d53d413024f5943803b9cc35 131 Gene3D G3DSA:3.90.1030.10 1 117 1.1E-48 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS13790 1507eec5637cf70faf576c981a9b5fb9 405 TIGRFAM TIGR00843 benE: benzoate transporter 24 399 3.3E-127 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 JE55_RS13790 1507eec5637cf70faf576c981a9b5fb9 405 PANTHER PTHR30199 15 403 3.7E-158 T 22-04-2016 JE55_RS13790 1507eec5637cf70faf576c981a9b5fb9 405 PANTHER PTHR30199:SF0 15 403 3.7E-158 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 JE55_RS13790 1507eec5637cf70faf576c981a9b5fb9 405 Pfam PF03594 Benzoate membrane transport protein 22 397 5.6E-154 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 JE55_RS16735 a1adb7daf859a3f012969b38bfae841c 163 SUPERFAMILY SSF52402 3 141 7.03E-27 T 22-04-2016 JE55_RS16735 a1adb7daf859a3f012969b38bfae841c 163 Pfam PF00582 Universal stress protein family 4 141 1.0E-18 T 22-04-2016 IPR006016 UspA GO:0006950 JE55_RS16735 a1adb7daf859a3f012969b38bfae841c 163 PRINTS PR01438 Universal stress protein signature 103 115 1.9E-5 T 22-04-2016 IPR006015 Universal stress protein A JE55_RS16735 a1adb7daf859a3f012969b38bfae841c 163 PRINTS PR01438 Universal stress protein signature 4 22 1.9E-5 T 22-04-2016 IPR006015 Universal stress protein A JE55_RS16735 a1adb7daf859a3f012969b38bfae841c 163 PRINTS PR01438 Universal stress protein signature 121 143 1.9E-5 T 22-04-2016 IPR006015 Universal stress protein A JE55_RS16735 a1adb7daf859a3f012969b38bfae841c 163 PANTHER PTHR31964 1 125 6.0E-15 T 22-04-2016 JE55_RS16735 a1adb7daf859a3f012969b38bfae841c 163 Gene3D G3DSA:3.40.50.620 1 141 1.9E-28 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS12230 23a6beef15b3f2b75002806ce1dafbad 207 Pfam PF11161 Protein of unknown function (DUF2946) 1 193 4.8E-70 T 22-04-2016 IPR021332 Protein of unknown function DUF2944 JE55_RS04385 f028523bd2279944853f59ed5ca5f990 574 PANTHER PTHR22916 204 395 2.4E-17 T 22-04-2016 JE55_RS04385 f028523bd2279944853f59ed5ca5f990 574 PANTHER PTHR22916 412 573 2.4E-17 T 22-04-2016 JE55_RS04385 f028523bd2279944853f59ed5ca5f990 574 Pfam PF00535 Glycosyl transferase family 2 269 384 1.3E-8 T 22-04-2016 IPR001173 Glycosyltransferase 2-like JE55_RS04385 f028523bd2279944853f59ed5ca5f990 574 SUPERFAMILY SSF53448 237 508 2.16E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04385 f028523bd2279944853f59ed5ca5f990 574 Gene3D G3DSA:3.40.50.150 20 191 1.0E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS04385 f028523bd2279944853f59ed5ca5f990 574 Gene3D G3DSA:3.90.550.10 255 501 4.0E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04385 f028523bd2279944853f59ed5ca5f990 574 Pfam PF13489 Methyltransferase domain 29 182 6.7E-8 T 22-04-2016 JE55_RS04385 f028523bd2279944853f59ed5ca5f990 574 SUPERFAMILY SSF53335 17 189 1.11E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS00280 6cb4294655d390d2aead5e69f608733d 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 404 7.2E-72 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 JE55_RS00280 6cb4294655d390d2aead5e69f608733d 451 PIRSF PIRSF006603 5 449 7.8E-58 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 JE55_RS00280 6cb4294655d390d2aead5e69f608733d 451 Pfam PF01554 MatE 14 172 3.1E-30 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 JE55_RS00280 6cb4294655d390d2aead5e69f608733d 451 Pfam PF01554 MatE 240 400 1.7E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 JE55_RS00280 6cb4294655d390d2aead5e69f608733d 451 PANTHER PTHR11206 4 440 2.8E-94 T 22-04-2016 JE55_RS00280 6cb4294655d390d2aead5e69f608733d 451 PANTHER PTHR11206:SF153 4 440 2.8E-94 T 22-04-2016 JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 Gene3D G3DSA:3.40.50.720 4 256 2.9E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.2E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.2E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.2E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 2.2E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.2E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 2.2E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 4.7E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 4.7E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 4.7E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 SUPERFAMILY SSF51735 5 256 1.92E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 256 1.7E-59 T 22-04-2016 JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 165 7.8E-4 T 22-04-2016 JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 PANTHER PTHR24322 165 197 1.9E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16105 8ae94eeab49f8fde8e5dc87fb29a4e9f 259 PANTHER PTHR24322 14 139 1.9E-55 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS07350 9aa46b3f81caa4fafdeb17f0772386bc 138 Gene3D G3DSA:3.90.1170.10 22 135 2.2E-52 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 JE55_RS07350 9aa46b3f81caa4fafdeb17f0772386bc 138 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.0E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 JE55_RS07350 9aa46b3f81caa4fafdeb17f0772386bc 138 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.0E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 JE55_RS07350 9aa46b3f81caa4fafdeb17f0772386bc 138 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.0E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 JE55_RS07350 9aa46b3f81caa4fafdeb17f0772386bc 138 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.0E-39 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 JE55_RS07350 9aa46b3f81caa4fafdeb17f0772386bc 138 PANTHER PTHR12220 1 136 6.1E-74 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 JE55_RS07350 9aa46b3f81caa4fafdeb17f0772386bc 138 SUPERFAMILY SSF54686 1 134 2.49E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 JE55_RS07350 9aa46b3f81caa4fafdeb17f0772386bc 138 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.8E-48 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 JE55_RS07350 9aa46b3f81caa4fafdeb17f0772386bc 138 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.7E-59 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 JE55_RS07350 9aa46b3f81caa4fafdeb17f0772386bc 138 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07350 9aa46b3f81caa4fafdeb17f0772386bc 138 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.703 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 JE55_RS07630 c497f2ddcb0c8d107d6e1bfbee8cb9df 422 PANTHER PTHR23501 22 408 1.9E-76 T 22-04-2016 JE55_RS07630 c497f2ddcb0c8d107d6e1bfbee8cb9df 422 PANTHER PTHR23501:SF56 22 408 1.9E-76 T 22-04-2016 JE55_RS07630 c497f2ddcb0c8d107d6e1bfbee8cb9df 422 SUPERFAMILY SSF103473 26 415 7.59E-31 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS07630 c497f2ddcb0c8d107d6e1bfbee8cb9df 422 Gene3D G3DSA:1.20.1250.20 34 198 4.5E-13 T 22-04-2016 JE55_RS07630 c497f2ddcb0c8d107d6e1bfbee8cb9df 422 Gene3D G3DSA:1.20.1250.20 234 411 1.9E-4 T 22-04-2016 JE55_RS07630 c497f2ddcb0c8d107d6e1bfbee8cb9df 422 Pfam PF07690 Major Facilitator Superfamily 48 336 2.6E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS04785 266aa26c562a84515fc8572f98a13442 134 Pfam PF11780 Protein of unknown function (DUF3318) 3 129 1.0E-22 T 22-04-2016 IPR021751 Protein of unknown function DUF3318 JE55_RS02870 c6715379452f3fe3d67ea3c5e4f83709 164 Pfam PF10721 Protein of unknown function (DUF2514) 10 155 8.4E-27 T 22-04-2016 IPR019659 Protein of unknown function DUF2514 JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 Gene3D G3DSA:3.40.710.10 275 510 6.5E-70 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 Gene3D G3DSA:3.40.710.10 84 127 3.7E-5 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 468 481 1.0E-21 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 391 405 1.0E-21 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 333 355 1.0E-21 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 406 420 1.0E-21 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 107 126 1.0E-21 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 97 490 3.6E-64 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 SUPERFAMILY SSF56601 77 510 3.54E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 PANTHER PTHR30023:SF0 28 510 4.3E-75 T 22-04-2016 JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 PANTHER PTHR30023 28 510 4.3E-75 T 22-04-2016 JE55_RS12315 fc9cf77442ec0a561afa481a21c08cbc 513 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 73 507 2.9E-92 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 JE55_RS08050 9def28a71785a700f810a963b9d0c0b5 73 Gene3D G3DSA:1.10.1200.10 8 71 4.2E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS08050 9def28a71785a700f810a963b9d0c0b5 73 SUPERFAMILY SSF47336 4 71 4.06E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS08740 c94563b545f890812322069d7634af90 332 Gene3D G3DSA:2.30.330.10 250 327 8.1E-8 T 22-04-2016 JE55_RS08740 c94563b545f890812322069d7634af90 332 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 7 320 1.1E-103 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JE55_RS08740 c94563b545f890812322069d7634af90 332 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 320 4.2E-17 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) JE55_RS08740 c94563b545f890812322069d7634af90 332 Gene3D G3DSA:3.40.1550.10 74 228 5.4E-6 T 22-04-2016 IPR028976 CheC-like domain JE55_RS08740 c94563b545f890812322069d7634af90 332 PANTHER PTHR30034:SF0 4 328 5.8E-127 T 22-04-2016 JE55_RS08740 c94563b545f890812322069d7634af90 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.8E-27 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JE55_RS08740 c94563b545f890812322069d7634af90 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 1.8E-27 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JE55_RS08740 c94563b545f890812322069d7634af90 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 1.8E-27 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JE55_RS08740 c94563b545f890812322069d7634af90 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 1.8E-27 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JE55_RS08740 c94563b545f890812322069d7634af90 332 SUPERFAMILY SSF101801 250 326 2.75E-13 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) JE55_RS08740 c94563b545f890812322069d7634af90 332 Pfam PF02154 Flagellar motor switch protein FliM 38 230 7.2E-73 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JE55_RS08740 c94563b545f890812322069d7634af90 332 PANTHER PTHR30034 4 328 5.8E-127 T 22-04-2016 JE55_RS08740 c94563b545f890812322069d7634af90 332 PIRSF PIRSF002888 3 329 1.5E-93 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 JE55_RS08740 c94563b545f890812322069d7634af90 332 SUPERFAMILY SSF103039 54 230 2.54E-21 T 22-04-2016 IPR028976 CheC-like domain JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 PANTHER PTHR30376 25 307 2.4E-98 T 22-04-2016 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 Gene3D G3DSA:1.10.601.10 38 145 1.4E-37 T 22-04-2016 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 PRINTS PR00046 Major sigma-70 factor signature 100 113 2.5E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 PRINTS PR00046 Major sigma-70 factor signature 124 132 2.5E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 PRINTS PR00046 Major sigma-70 factor signature 277 292 2.5E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 PRINTS PR00046 Major sigma-70 factor signature 292 303 2.5E-16 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 Pfam PF04545 Sigma-70, region 4 249 304 3.0E-13 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 Pfam PF00140 Sigma-70 factor, region 1.2 39 65 2.7E-6 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 37 308 3.9E-124 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 100 113 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 SUPERFAMILY SSF88659 211 308 6.98E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 Gene3D G3DSA:1.10.10.10 245 307 5.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 277 303 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 18 309 53.503 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 SUPERFAMILY SSF88946 38 145 7.59E-40 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 71 307 2.8E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS11020 5b620d12c484b9593eee842a7bad2535 311 Pfam PF04542 Sigma-70 region 2 76 145 2.4E-18 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS19800 079d5ec5904f2f80cc498a274eb7c70b 102 Gene3D G3DSA:3.40.50.980 1 101 1.4E-17 T 22-04-2016 JE55_RS19800 079d5ec5904f2f80cc498a274eb7c70b 102 Pfam PF00501 AMP-binding enzyme 9 83 3.5E-6 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS19800 079d5ec5904f2f80cc498a274eb7c70b 102 SUPERFAMILY SSF56801 2 96 4.84E-11 T 22-04-2016 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 SUPERFAMILY SSF53187 186 500 3.77E-127 T 22-04-2016 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 11 502 38.424 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 354 361 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 SUPERFAMILY SSF52949 21 191 1.12E-42 T 22-04-2016 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 PANTHER PTHR11963:SF13 22 502 1.3E-212 T 22-04-2016 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 Gene3D G3DSA:3.40.630.10 186 499 1.8E-141 T 22-04-2016 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 193 493 2.0E-122 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 PANTHER PTHR11963 22 502 1.3E-212 T 22-04-2016 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 27 155 1.5E-27 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 PRINTS PR00481 Cytosol aminopeptidase signature 291 312 7.2E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 PRINTS PR00481 Cytosol aminopeptidase signature 350 370 7.2E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 PRINTS PR00481 Cytosol aminopeptidase signature 328 349 7.2E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 PRINTS PR00481 Cytosol aminopeptidase signature 378 393 7.2E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 PRINTS PR00481 Cytosol aminopeptidase signature 269 286 7.2E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 JE55_RS13115 48a20278cf1d7e43c66052642b74751b 503 Gene3D G3DSA:3.40.220.10 1 169 9.2E-56 T 22-04-2016 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 PANTHER PTHR10357 253 412 5.0E-136 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 PANTHER PTHR10357 16 124 5.0E-136 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 PANTHER PTHR10357 718 851 5.0E-136 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 Gene3D G3DSA:1.10.10.470 608 717 1.0E-24 T 22-04-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 SMART SM00642 16 525 1.6E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 Pfam PF00128 Alpha amylase, catalytic domain 24 93 1.6E-16 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 Gene3D G3DSA:3.20.20.80 301 378 8.3E-74 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 Gene3D G3DSA:3.20.20.80 567 607 8.3E-74 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 Gene3D G3DSA:3.20.20.80 3 95 8.3E-74 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 Gene3D G3DSA:3.20.20.80 726 847 8.3E-74 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 PANTHER PTHR10357:SF166 253 412 5.0E-136 T 22-04-2016 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 PANTHER PTHR10357:SF166 16 124 5.0E-136 T 22-04-2016 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 PANTHER PTHR10357:SF166 718 851 5.0E-136 T 22-04-2016 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 SUPERFAMILY SSF51445 517 813 2.53E-124 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 SUPERFAMILY SSF51445 3 124 2.53E-124 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 SUPERFAMILY SSF51445 243 462 2.53E-124 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 3 917 4.8E-282 T 22-04-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 Gene3D G3DSA:3.30.1590.10 247 285 6.6E-43 T 22-04-2016 JE55_RS15440 6f69f2d4556afbc83be7591a33aecf3e 930 Gene3D G3DSA:3.30.1590.10 96 179 6.6E-43 T 22-04-2016 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 SUPERFAMILY SSF56655 5 333 1.1E-116 T 22-04-2016 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 PIRSF PIRSF000904 3 338 4.2E-126 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 PANTHER PTHR11556 4 337 1.9E-160 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 7 335 46.993 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 8 195 1.7E-63 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 Gene3D G3DSA:3.40.190.80 199 335 9.3E-59 T 22-04-2016 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 207 234 4.3E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 69 95 4.3E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 150 173 4.3E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 309 334 4.3E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 32 59 4.3E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 181 204 4.3E-74 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 Gene3D G3DSA:3.30.540.10 7 197 3.4E-75 T 22-04-2016 JE55_RS03760 21bea6754101833ebfb3bdd68bd842af 338 PIRSF PIRSF500210 3 338 2.5E-129 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 JE55_RS11530 79655ad269765abb132f62e15fd1135f 274 Pfam PF14489 QueF-like protein 187 262 7.7E-26 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS11530 79655ad269765abb132f62e15fd1135f 274 PIRSF PIRSF004750 1 274 3.1E-124 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS11530 79655ad269765abb132f62e15fd1135f 274 Gene3D G3DSA:3.30.1130.10 14 128 1.1E-42 T 22-04-2016 JE55_RS11530 79655ad269765abb132f62e15fd1135f 274 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 14 123 1.7E-46 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS11530 79655ad269765abb132f62e15fd1135f 274 TIGRFAM TIGR03138 QueF: queuine synthase 3 274 1.1E-119 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS11530 79655ad269765abb132f62e15fd1135f 274 SUPERFAMILY SSF55620 177 259 7.26E-11 T 22-04-2016 JE55_RS11530 79655ad269765abb132f62e15fd1135f 274 Gene3D G3DSA:3.30.1130.10 138 273 3.2E-52 T 22-04-2016 JE55_RS11530 79655ad269765abb132f62e15fd1135f 274 PANTHER PTHR34354 1 274 5.4E-86 T 22-04-2016 JE55_RS11530 79655ad269765abb132f62e15fd1135f 274 PANTHER PTHR34354:SF1 1 274 5.4E-86 T 22-04-2016 JE55_RS11530 79655ad269765abb132f62e15fd1135f 274 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 274 152.576 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 JE55_RS11730 832263d980891b70b7db036ad2e52d56 295 Gene3D G3DSA:3.10.580.10 58 194 4.5E-17 T 22-04-2016 JE55_RS11730 832263d980891b70b7db036ad2e52d56 295 Pfam PF00571 CBS domain 87 128 2.4E-4 T 22-04-2016 IPR000644 CBS domain JE55_RS11730 832263d980891b70b7db036ad2e52d56 295 Pfam PF00571 CBS domain 134 188 3.7E-5 T 22-04-2016 IPR000644 CBS domain JE55_RS11730 832263d980891b70b7db036ad2e52d56 295 SUPERFAMILY SSF56176 204 283 3.27E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS11730 832263d980891b70b7db036ad2e52d56 295 SMART SM01091 205 283 7.7E-28 T 22-04-2016 IPR005170 Transporter-associated domain JE55_RS11730 832263d980891b70b7db036ad2e52d56 295 Gene3D G3DSA:3.30.465.10 195 282 1.3E-27 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 JE55_RS11730 832263d980891b70b7db036ad2e52d56 295 Pfam PF03471 Transporter associated domain 208 281 9.1E-20 T 22-04-2016 IPR005170 Transporter-associated domain JE55_RS11730 832263d980891b70b7db036ad2e52d56 295 PANTHER PTHR22777 19 282 1.8E-100 T 22-04-2016 JE55_RS11730 832263d980891b70b7db036ad2e52d56 295 SUPERFAMILY SSF54631 66 200 3.16E-29 T 22-04-2016 JE55_RS01270 5d3bb9d088bc3261ddb794f1de55e2e9 307 Gene3D G3DSA:3.40.50.150 103 272 1.3E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS01270 5d3bb9d088bc3261ddb794f1de55e2e9 307 SUPERFAMILY SSF53335 11 270 8.0E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS01270 5d3bb9d088bc3261ddb794f1de55e2e9 307 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 208 214 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JE55_RS01270 5d3bb9d088bc3261ddb794f1de55e2e9 307 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 10 271 1.1E-65 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 JE55_RS01270 5d3bb9d088bc3261ddb794f1de55e2e9 307 PIRSF PIRSF037167 1 306 1.5E-120 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 JE55_RS01270 5d3bb9d088bc3261ddb794f1de55e2e9 307 PANTHER PTHR18895:SF66 10 285 8.3E-113 T 22-04-2016 JE55_RS01270 5d3bb9d088bc3261ddb794f1de55e2e9 307 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 9 298 1.0E-117 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 JE55_RS01270 5d3bb9d088bc3261ddb794f1de55e2e9 307 PANTHER PTHR18895 10 285 8.3E-113 T 22-04-2016 JE55_RS01270 5d3bb9d088bc3261ddb794f1de55e2e9 307 Gene3D G3DSA:1.10.8.10 10 101 4.5E-10 T 22-04-2016 JE55_RS01270 5d3bb9d088bc3261ddb794f1de55e2e9 307 Pfam PF05175 Methyltransferase small domain 129 218 2.8E-11 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 JE55_RS01270 5d3bb9d088bc3261ddb794f1de55e2e9 307 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 1 304 52.137 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 SMART SM00421 173 230 1.1E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 218 5.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 190 5.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 190 206 5.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 SUPERFAMILY SSF75516 4 165 1.44E-36 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 229 2.6E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 Pfam PF03472 Autoinducer binding domain 17 159 3.6E-33 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 Gene3D G3DSA:3.30.450.80 1 177 7.3E-39 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 Gene3D G3DSA:1.10.10.10 178 236 1.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 PANTHER PTHR26402:SF432 38 232 5.1E-15 T 22-04-2016 JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 SUPERFAMILY SSF46894 161 236 1.12E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 ProSitePatterns PS00622 LuxR-type HTH domain signature. 190 217 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS02475 acc6862aef12c85c736e3eac0a2acaea 237 PANTHER PTHR26402 38 232 5.1E-15 T 22-04-2016 JE55_RS05305 cea3c240e7a088769a0acaf2bcb1331b 265 SMART SM00382 58 253 3.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS05305 cea3c240e7a088769a0acaf2bcb1331b 265 PANTHER PTHR24220 28 246 4.1E-94 T 22-04-2016 JE55_RS05305 cea3c240e7a088769a0acaf2bcb1331b 265 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 26 248 1.3E-93 T 22-04-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 JE55_RS05305 cea3c240e7a088769a0acaf2bcb1331b 265 ProSitePatterns PS00211 ABC transporters family signature. 178 192 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS05305 cea3c240e7a088769a0acaf2bcb1331b 265 Pfam PF00005 ABC transporter 49 206 4.5E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS05305 cea3c240e7a088769a0acaf2bcb1331b 265 PANTHER PTHR24220:SF380 28 246 4.1E-94 T 22-04-2016 JE55_RS05305 cea3c240e7a088769a0acaf2bcb1331b 265 SUPERFAMILY SSF52540 46 251 1.65E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05305 cea3c240e7a088769a0acaf2bcb1331b 265 Gene3D G3DSA:3.40.50.300 26 248 5.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09420 d92acfabb6037594170c289cb4a34162 361 SUPERFAMILY SSF52540 3 204 1.26E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09420 d92acfabb6037594170c289cb4a34162 361 PANTHER PTHR13748 3 211 1.4E-124 T 22-04-2016 JE55_RS09420 d92acfabb6037594170c289cb4a34162 361 PANTHER PTHR13748 241 361 1.4E-124 T 22-04-2016 JE55_RS09420 d92acfabb6037594170c289cb4a34162 361 SUPERFAMILY SSF90002 266 360 2.22E-25 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS09420 d92acfabb6037594170c289cb4a34162 361 SMART SM00833 266 360 9.9E-16 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS09420 d92acfabb6037594170c289cb4a34162 361 Gene3D G3DSA:3.40.50.300 2 203 8.7E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09420 d92acfabb6037594170c289cb4a34162 361 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 266 360 1.6E-22 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS09420 d92acfabb6037594170c289cb4a34162 361 Gene3D G3DSA:3.30.1220.10 246 361 4.0E-43 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS09420 d92acfabb6037594170c289cb4a34162 361 PANTHER PTHR13748:SF43 3 211 1.4E-124 T 22-04-2016 JE55_RS09420 d92acfabb6037594170c289cb4a34162 361 PANTHER PTHR13748:SF43 241 361 1.4E-124 T 22-04-2016 JE55_RS09420 d92acfabb6037594170c289cb4a34162 361 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 184 2.3E-55 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JE55_RS02045 f7260a05539421429c47767eaffa0b48 296 SUPERFAMILY SSF53474 8 296 3.46E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS02045 f7260a05539421429c47767eaffa0b48 296 Pfam PF12697 Alpha/beta hydrolase family 33 289 9.0E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS02045 f7260a05539421429c47767eaffa0b48 296 PANTHER PTHR10992 10 296 4.8E-33 T 22-04-2016 JE55_RS02045 f7260a05539421429c47767eaffa0b48 296 Gene3D G3DSA:3.40.50.1820 6 295 3.3E-63 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS02045 f7260a05539421429c47767eaffa0b48 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 2.1E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS02045 f7260a05539421429c47767eaffa0b48 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 118 131 2.1E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS02045 f7260a05539421429c47767eaffa0b48 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.1E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS00250 b82520688106d39bfca646f31912d011 420 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.0E-209 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 JE55_RS00250 b82520688106d39bfca646f31912d011 420 SMART SM00959 5 47 2.5E-17 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 JE55_RS00250 b82520688106d39bfca646f31912d011 420 SMART SM00357 52 118 2.3E-17 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 JE55_RS00250 b82520688106d39bfca646f31912d011 420 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.3E-21 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS00250 b82520688106d39bfca646f31912d011 420 PANTHER PTHR15184:SF34 54 418 1.0E-186 T 22-04-2016 JE55_RS00250 b82520688106d39bfca646f31912d011 420 Gene3D G3DSA:2.40.50.140 49 117 8.9E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00250 b82520688106d39bfca646f31912d011 420 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 4.3E-31 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 JE55_RS00250 b82520688106d39bfca646f31912d011 420 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 2.0E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 JE55_RS00250 b82520688106d39bfca646f31912d011 420 SMART SM00382 170 349 2.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS00250 b82520688106d39bfca646f31912d011 420 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 242.914 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 JE55_RS00250 b82520688106d39bfca646f31912d011 420 SUPERFAMILY SSF50249 49 125 1.83E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00250 b82520688106d39bfca646f31912d011 420 Gene3D G3DSA:1.10.720.10 1 47 1.4E-21 T 22-04-2016 JE55_RS00250 b82520688106d39bfca646f31912d011 420 PANTHER PTHR15184 54 418 1.0E-186 T 22-04-2016 JE55_RS00250 b82520688106d39bfca646f31912d011 420 SUPERFAMILY SSF68912 1 46 1.96E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 JE55_RS00250 b82520688106d39bfca646f31912d011 420 Gene3D G3DSA:3.40.50.300 131 418 1.1E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00250 b82520688106d39bfca646f31912d011 420 SUPERFAMILY SSF52540 90 371 7.57E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11995 ae018779130c9d382507a33e59cc0856 232 SUPERFAMILY SSF53271 4 212 8.39E-54 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS11995 ae018779130c9d382507a33e59cc0856 232 Pfam PF00156 Phosphoribosyl transferase domain 8 194 3.4E-29 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 JE55_RS11995 ae018779130c9d382507a33e59cc0856 232 Gene3D G3DSA:3.40.50.2020 5 64 1.4E-39 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS11995 ae018779130c9d382507a33e59cc0856 232 Gene3D G3DSA:3.40.50.2020 100 205 1.4E-39 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS11995 ae018779130c9d382507a33e59cc0856 232 PANTHER PTHR31299 3 215 1.0E-84 T 22-04-2016 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 287 79.411 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 Gene3D G3DSA:3.30.479.20 234 269 9.0E-28 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 Gene3D G3DSA:3.30.479.20 150 185 9.0E-28 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 Gene3D G3DSA:1.10.286.20 190 233 1.3E-19 T 22-04-2016 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 SUPERFAMILY SSF54713 56 145 2.62E-26 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 Gene3D G3DSA:3.30.479.20 57 148 3.4E-21 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 SUPERFAMILY SSF54713 150 287 4.97E-50 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 287 1.1E-96 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 Pfam PF00889 Elongation factor TS 71 270 5.7E-71 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 PANTHER PTHR11741 1 290 6.1E-120 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 Gene3D G3DSA:1.10.8.10 3 55 3.3E-21 T 22-04-2016 JE55_RS01190 801901bc601964142ab75663e2cdbd0f 293 SUPERFAMILY SSF46934 3 56 1.02E-13 T 22-04-2016 IPR009060 UBA-like GO:0005515 JE55_RS10630 d805dfe8411653da0e723636cd608f81 154 Pfam PF00583 Acetyltransferase (GNAT) family 57 123 1.7E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS10630 d805dfe8411653da0e723636cd608f81 154 Gene3D G3DSA:3.40.630.30 1 128 7.6E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS10630 d805dfe8411653da0e723636cd608f81 154 SUPERFAMILY SSF55729 1 128 4.18E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 SMART SM00228 104 175 2.2E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 SMART SM00245 177 385 9.4E-61 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 Pfam PF03572 Peptidase family S41 203 384 2.7E-54 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 PANTHER PTHR32060 295 456 1.4E-109 T 22-04-2016 JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 PANTHER PTHR32060 57 278 1.4E-109 T 22-04-2016 JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 Gene3D G3DSA:2.30.42.10 111 186 7.8E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 57 387 1.3E-95 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 Gene3D G3DSA:3.90.226.10 187 387 1.5E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 Gene3D G3DSA:3.90.226.10 453 480 1.5E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 SUPERFAMILY SSF52096 196 389 1.19E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 SUPERFAMILY SSF52096 39 122 1.19E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 SUPERFAMILY SSF50156 94 187 3.51E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 Gene3D G3DSA:3.30.750.44 56 110 7.0E-10 T 22-04-2016 JE55_RS10685 33d91ecaef52cf61668cc36ab56c88b1 530 Pfam PF13180 PDZ domain 104 184 2.9E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS09950 e55428df30268dce8ff6fde3ad77d995 226 Pfam PF04011 LemA family 23 208 2.4E-65 T 22-04-2016 IPR007156 LemA JE55_RS09950 e55428df30268dce8ff6fde3ad77d995 226 PANTHER PTHR34478 11 211 1.3E-94 T 22-04-2016 JE55_RS09950 e55428df30268dce8ff6fde3ad77d995 226 Gene3D G3DSA:1.20.1440.20 28 208 6.9E-64 T 22-04-2016 IPR023353 LemA-like domain JE55_RS09950 e55428df30268dce8ff6fde3ad77d995 226 SUPERFAMILY SSF140478 40 195 4.18E-54 T 22-04-2016 IPR023353 LemA-like domain JE55_RS09950 e55428df30268dce8ff6fde3ad77d995 226 PANTHER PTHR34478:SF2 11 211 1.3E-94 T 22-04-2016 JE55_RS06400 5a77c3352eac1ca736bf156e055ca9ec 568 TIGRFAM TIGR02288 PaaN_2: phenylacetic acid degradation protein paaN 3 555 6.2E-273 T 22-04-2016 IPR011975 Phenylacetic acid degradation protein PaaN2 JE55_RS06400 5a77c3352eac1ca736bf156e055ca9ec 568 Pfam PF00171 Aldehyde dehydrogenase family 90 503 9.9E-35 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS06400 5a77c3352eac1ca736bf156e055ca9ec 568 Gene3D G3DSA:3.40.309.10 312 516 1.4E-29 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS06400 5a77c3352eac1ca736bf156e055ca9ec 568 Gene3D G3DSA:3.40.605.10 84 303 2.2E-29 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS06400 5a77c3352eac1ca736bf156e055ca9ec 568 PANTHER PTHR11699:SF165 90 521 1.4E-107 T 22-04-2016 JE55_RS06400 5a77c3352eac1ca736bf156e055ca9ec 568 PANTHER PTHR11699 90 521 1.4E-107 T 22-04-2016 JE55_RS06400 5a77c3352eac1ca736bf156e055ca9ec 568 SUPERFAMILY SSF53720 64 530 5.63E-58 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS01250 d294e45c10f61aea10c8b25a1ad74d51 415 PANTHER PTHR11751 17 409 3.8E-108 T 22-04-2016 JE55_RS01250 d294e45c10f61aea10c8b25a1ad74d51 415 SUPERFAMILY SSF53383 6 411 1.05E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS01250 d294e45c10f61aea10c8b25a1ad74d51 415 Pfam PF00155 Aminotransferase class I and II 37 396 5.3E-40 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS01250 d294e45c10f61aea10c8b25a1ad74d51 415 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 6 410 7.7E-181 T 22-04-2016 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 JE55_RS01250 d294e45c10f61aea10c8b25a1ad74d51 415 Gene3D G3DSA:3.40.640.10 49 276 1.9E-57 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS01250 d294e45c10f61aea10c8b25a1ad74d51 415 Gene3D G3DSA:3.90.1150.10 277 411 3.5E-26 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS01250 d294e45c10f61aea10c8b25a1ad74d51 415 PANTHER PTHR11751:SF354 17 409 3.8E-108 T 22-04-2016 JE55_RS09875 d6e71cf0109c29e561d71e27a1be92cd 415 TIGRFAM TIGR03472 HpnI: hopanoid biosynthesis associated glycosyl transferase protein HpnI 35 407 6.2E-165 T 22-04-2016 IPR017835 Hopanoid biosynthesis associated glycosyltransferase, HpnI JE55_RS09875 d6e71cf0109c29e561d71e27a1be92cd 415 PANTHER PTHR12726 3 404 3.8E-46 T 22-04-2016 JE55_RS09875 d6e71cf0109c29e561d71e27a1be92cd 415 Pfam PF13506 Glycosyl transferase family 21 131 303 1.2E-46 T 22-04-2016 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|UniPathway: UPA00222 JE55_RS09875 d6e71cf0109c29e561d71e27a1be92cd 415 Gene3D G3DSA:3.90.550.10 74 282 6.4E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS09875 d6e71cf0109c29e561d71e27a1be92cd 415 SUPERFAMILY SSF53448 72 308 8.44E-27 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS07265 742efeb3f57cce0864a5c3a4ca537bf7 133 PIRSF PIRSF002131 1 133 5.7E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JE55_RS07265 742efeb3f57cce0864a5c3a4ca537bf7 133 Gene3D G3DSA:3.30.420.80 10 133 1.6E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JE55_RS07265 742efeb3f57cce0864a5c3a4ca537bf7 133 ProSitePatterns PS00054 Ribosomal protein S11 signature. 101 123 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site JE55_RS07265 742efeb3f57cce0864a5c3a4ca537bf7 133 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 14 130 1.9E-56 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07265 742efeb3f57cce0864a5c3a4ca537bf7 133 PANTHER PTHR11759 15 133 9.6E-69 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JE55_RS07265 742efeb3f57cce0864a5c3a4ca537bf7 133 SUPERFAMILY SSF53137 18 133 4.12E-48 T 22-04-2016 JE55_RS07265 742efeb3f57cce0864a5c3a4ca537bf7 133 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 133 33.333 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JE55_RS07265 742efeb3f57cce0864a5c3a4ca537bf7 133 Pfam PF00411 Ribosomal protein S11 23 132 1.5E-50 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 JE55_RS16425 312cb62fe3e530a93069be7d0f7fb8e5 155 Pfam PF07811 TadE-like protein 16 58 3.2E-14 T 22-04-2016 IPR012495 TadE-like JE55_RS02090 c43a4034789bf9d1855a66e7e843da41 275 Pfam PF12697 Alpha/beta hydrolase family 9 255 6.7E-13 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS02090 c43a4034789bf9d1855a66e7e843da41 275 SUPERFAMILY SSF53474 5 110 6.65E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS02090 c43a4034789bf9d1855a66e7e843da41 275 SUPERFAMILY SSF53474 175 257 6.65E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS02090 c43a4034789bf9d1855a66e7e843da41 275 Gene3D G3DSA:3.40.50.1820 5 259 5.3E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS19330 150545a852e439e3db7752ba782822bf 232 PANTHER PTHR12815:SF11 5 232 6.6E-79 T 22-04-2016 JE55_RS19330 150545a852e439e3db7752ba782822bf 232 Pfam PF07244 Surface antigen variable number repeat 7 72 5.8E-7 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 JE55_RS19330 150545a852e439e3db7752ba782822bf 232 Pfam PF07244 Surface antigen variable number repeat 158 229 1.2E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 JE55_RS19330 150545a852e439e3db7752ba782822bf 232 Pfam PF07244 Surface antigen variable number repeat 75 154 4.1E-13 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 JE55_RS19330 150545a852e439e3db7752ba782822bf 232 PANTHER PTHR12815 5 232 6.6E-79 T 22-04-2016 JE55_RS06570 02156ffaa98652e545ac38864cd304a1 183 SUPERFAMILY SSF52499 2 164 2.22E-45 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 JE55_RS06570 02156ffaa98652e545ac38864cd304a1 183 Pfam PF00857 Isochorismatase family 5 144 4.7E-33 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 JE55_RS06570 02156ffaa98652e545ac38864cd304a1 183 PANTHER PTHR11080 2 142 1.5E-31 T 22-04-2016 JE55_RS06570 02156ffaa98652e545ac38864cd304a1 183 Gene3D G3DSA:3.40.50.850 1 152 1.3E-45 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 JE55_RS14995 388497245e2da156f260892a48eb9c15 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 255 5.7E-40 T 22-04-2016 JE55_RS14995 388497245e2da156f260892a48eb9c15 257 PANTHER PTHR24322:SF456 159 191 7.9E-78 T 22-04-2016 JE55_RS14995 388497245e2da156f260892a48eb9c15 257 PANTHER PTHR24322:SF456 13 143 7.9E-78 T 22-04-2016 JE55_RS14995 388497245e2da156f260892a48eb9c15 257 SUPERFAMILY SSF51735 5 256 6.09E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14995 388497245e2da156f260892a48eb9c15 257 PANTHER PTHR24322 159 191 7.9E-78 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14995 388497245e2da156f260892a48eb9c15 257 PANTHER PTHR24322 13 143 7.9E-78 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14995 388497245e2da156f260892a48eb9c15 257 Gene3D G3DSA:3.40.50.720 5 256 6.5E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14995 388497245e2da156f260892a48eb9c15 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.86E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14995 388497245e2da156f260892a48eb9c15 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.86E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14995 388497245e2da156f260892a48eb9c15 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.86E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14995 388497245e2da156f260892a48eb9c15 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.86E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS06275 64c885ceece17775679bb444627664e1 398 PANTHER PTHR30314 1 396 2.5E-162 T 22-04-2016 JE55_RS06275 64c885ceece17775679bb444627664e1 398 Gene3D G3DSA:3.40.50.1440 15 212 7.4E-86 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 JE55_RS06275 64c885ceece17775679bb444627664e1 398 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 383 35.638 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 JE55_RS06275 64c885ceece17775679bb444627664e1 398 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 5 324 1.1E-118 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 JE55_RS06275 64c885ceece17775679bb444627664e1 398 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 171 6.6E-38 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 JE55_RS06275 64c885ceece17775679bb444627664e1 398 SUPERFAMILY SSF55307 202 316 1.85E-38 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal JE55_RS06275 64c885ceece17775679bb444627664e1 398 SMART SM00865 205 323 5.4E-51 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain JE55_RS06275 64c885ceece17775679bb444627664e1 398 PANTHER PTHR30314:SF3 1 396 2.5E-162 T 22-04-2016 JE55_RS06275 64c885ceece17775679bb444627664e1 398 SMART SM00864 14 203 1.1E-106 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 JE55_RS06275 64c885ceece17775679bb444627664e1 398 Pfam PF12327 FtsZ family, C-terminal domain 220 314 5.2E-30 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal JE55_RS06275 64c885ceece17775679bb444627664e1 398 Gene3D G3DSA:3.30.1330.20 213 320 6.1E-43 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain JE55_RS06275 64c885ceece17775679bb444627664e1 398 SUPERFAMILY SSF52490 15 206 5.23E-64 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 JE55_RS06275 64c885ceece17775679bb444627664e1 398 ProSitePatterns PS01135 FtsZ protein signature 2. 95 116 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 JE55_RS06275 64c885ceece17775679bb444627664e1 398 PRINTS PR00423 Cell division protein FtsZ signature 187 209 3.8E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 JE55_RS06275 64c885ceece17775679bb444627664e1 398 PRINTS PR00423 Cell division protein FtsZ signature 96 116 3.8E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 JE55_RS06275 64c885ceece17775679bb444627664e1 398 PRINTS PR00423 Cell division protein FtsZ signature 124 145 3.8E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 JE55_RS06275 64c885ceece17775679bb444627664e1 398 PRINTS PR00423 Cell division protein FtsZ signature 210 231 3.8E-46 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 JE55_RS16435 cf2a33a098f19c90885653359ae9fcfb 441 Pfam PF00263 Bacterial type II and III secretion system protein 239 398 1.6E-44 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 JE55_RS16435 cf2a33a098f19c90885653359ae9fcfb 441 PANTHER PTHR30332:SF1 160 419 3.2E-74 T 22-04-2016 JE55_RS16435 cf2a33a098f19c90885653359ae9fcfb 441 Pfam PF13629 Pilus formation protein N terminal region 26 96 2.5E-20 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal JE55_RS16435 cf2a33a098f19c90885653359ae9fcfb 441 PANTHER PTHR30332 160 419 3.2E-74 T 22-04-2016 JE55_RS16435 cf2a33a098f19c90885653359ae9fcfb 441 PRINTS PR00811 Bacterial general secretion pathway protein D signature 363 381 2.5E-10 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS16435 cf2a33a098f19c90885653359ae9fcfb 441 PRINTS PR00811 Bacterial general secretion pathway protein D signature 234 258 2.5E-10 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS16435 cf2a33a098f19c90885653359ae9fcfb 441 PRINTS PR00811 Bacterial general secretion pathway protein D signature 386 400 2.5E-10 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS06775 130feabad71b3d645a4af03b1ff4a72b 496 PANTHER PTHR35565:SF3 1 496 1.2E-254 T 22-04-2016 JE55_RS06775 130feabad71b3d645a4af03b1ff4a72b 496 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 19 491 5.9E-222 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath JE55_RS06775 130feabad71b3d645a4af03b1ff4a72b 496 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 69 491 3.5E-191 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath JE55_RS06775 130feabad71b3d645a4af03b1ff4a72b 496 PANTHER PTHR35565 1 496 1.2E-254 T 22-04-2016 JE55_RS03570 f96a601eb7cb2370655add5e93ee7c15 328 SUPERFAMILY SSF53613 30 326 4.68E-60 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS03570 f96a601eb7cb2370655add5e93ee7c15 328 PANTHER PTHR10584 15 326 1.1E-117 T 22-04-2016 JE55_RS03570 f96a601eb7cb2370655add5e93ee7c15 328 Gene3D G3DSA:3.40.1190.20 31 326 1.8E-62 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS03570 f96a601eb7cb2370655add5e93ee7c15 328 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 25 327 1.5E-119 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 JE55_RS03570 f96a601eb7cb2370655add5e93ee7c15 328 PANTHER PTHR10584:SF159 15 326 1.1E-117 T 22-04-2016 JE55_RS03570 f96a601eb7cb2370655add5e93ee7c15 328 Pfam PF00294 pfkB family carbohydrate kinase 31 320 8.5E-45 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB JE55_RS11110 4bc3de76c746ba665ad5792757a210d2 318 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 7 316 49.093 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 JE55_RS11110 4bc3de76c746ba665ad5792757a210d2 318 SMART SM01400 7 124 1.0E-79 T 22-04-2016 JE55_RS11110 4bc3de76c746ba665ad5792757a210d2 318 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 315 1.8E-28 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 JE55_RS11110 4bc3de76c746ba665ad5792757a210d2 318 Gene3D G3DSA:3.40.50.2020 163 290 1.6E-54 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS11110 4bc3de76c746ba665ad5792757a210d2 318 Gene3D G3DSA:3.40.50.2020 4 162 4.3E-76 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS11110 4bc3de76c746ba665ad5792757a210d2 318 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 7 124 1.7E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 JE55_RS11110 4bc3de76c746ba665ad5792757a210d2 318 PANTHER PTHR10210:SF41 1 315 2.1E-178 T 22-04-2016 JE55_RS11110 4bc3de76c746ba665ad5792757a210d2 318 SUPERFAMILY SSF53271 72 305 1.86E-63 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS11110 4bc3de76c746ba665ad5792757a210d2 318 PANTHER PTHR10210 1 315 2.1E-178 T 22-04-2016 JE55_RS11110 4bc3de76c746ba665ad5792757a210d2 318 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 8 315 2.9E-121 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 JE55_RS11110 4bc3de76c746ba665ad5792757a210d2 318 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 JE55_RS06715 25c618d7d25cbc569b0d47c35bcdead9 482 SUPERFAMILY SSF56954 4 474 1.7E-86 T 22-04-2016 JE55_RS06715 25c618d7d25cbc569b0d47c35bcdead9 482 Gene3D G3DSA:1.20.1600.10 59 474 1.2E-83 T 22-04-2016 JE55_RS06715 25c618d7d25cbc569b0d47c35bcdead9 482 PANTHER PTHR30203:SF8 57 476 1.9E-105 T 22-04-2016 JE55_RS06715 25c618d7d25cbc569b0d47c35bcdead9 482 PIRSF PIRSF001892 1 482 7.3E-168 T 22-04-2016 IPR028351 Cyclolysin transport protein CyaE GO:0005215 JE55_RS06715 25c618d7d25cbc569b0d47c35bcdead9 482 Pfam PF02321 Outer membrane efflux protein 286 474 2.0E-34 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS06715 25c618d7d25cbc569b0d47c35bcdead9 482 Pfam PF02321 Outer membrane efflux protein 63 260 1.2E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS06715 25c618d7d25cbc569b0d47c35bcdead9 482 PANTHER PTHR30203 57 476 1.9E-105 T 22-04-2016 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 88 111 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 SUPERFAMILY SSF54373 297 483 5.1E-58 T 22-04-2016 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 261 275 - T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 Pfam PF00732 GMC oxidoreductase 11 302 1.5E-86 T 22-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 PIRSF PIRSF000137 2 550 1.2E-153 T 22-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 PANTHER PTHR11552:SF51 1 561 2.0E-218 T 22-04-2016 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 PANTHER PTHR11552 1 561 2.0E-218 T 22-04-2016 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 SUPERFAMILY SSF51905 482 543 5.33E-91 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 SUPERFAMILY SSF51905 9 295 5.33E-91 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 Pfam PF05199 GMC oxidoreductase 397 535 4.2E-40 T 22-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 Gene3D G3DSA:3.50.50.60 476 543 2.8E-125 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 Gene3D G3DSA:3.50.50.60 194 320 2.8E-125 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08535 8ed5fde3c8a131df689013dd074f3bfc 561 Gene3D G3DSA:3.50.50.60 8 133 2.8E-125 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS02260 e9cce0e604f39c7a9df0e912bcf580f6 426 Gene3D G3DSA:1.20.1250.20 213 413 1.6E-19 T 22-04-2016 JE55_RS02260 e9cce0e604f39c7a9df0e912bcf580f6 426 PANTHER PTHR23515 3 407 1.8E-75 T 22-04-2016 JE55_RS02260 e9cce0e604f39c7a9df0e912bcf580f6 426 Pfam PF07690 Major Facilitator Superfamily 24 373 2.5E-37 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS02260 e9cce0e604f39c7a9df0e912bcf580f6 426 Gene3D G3DSA:1.20.1250.20 16 199 1.5E-23 T 22-04-2016 JE55_RS02260 e9cce0e604f39c7a9df0e912bcf580f6 426 SUPERFAMILY SSF103473 10 413 1.57E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS14535 01c156cc2eb5e66374317acb650e680c 390 SUPERFAMILY SSF53383 15 389 5.53E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS14535 01c156cc2eb5e66374317acb650e680c 390 Gene3D G3DSA:3.40.640.10 50 278 6.1E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS14535 01c156cc2eb5e66374317acb650e680c 390 PANTHER PTHR11751:SF301 16 390 5.4E-137 T 22-04-2016 JE55_RS14535 01c156cc2eb5e66374317acb650e680c 390 Gene3D G3DSA:3.90.1150.10 279 389 5.2E-15 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS14535 01c156cc2eb5e66374317acb650e680c 390 PANTHER PTHR11751 16 390 5.4E-137 T 22-04-2016 JE55_RS14535 01c156cc2eb5e66374317acb650e680c 390 Pfam PF00155 Aminotransferase class I and II 38 387 1.2E-60 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS10620 243a3115330f4b903751e9f4a5aae0a2 259 Gene3D G3DSA:3.40.50.1820 11 251 2.7E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS10620 243a3115330f4b903751e9f4a5aae0a2 259 PANTHER PTHR11487 17 256 1.6E-52 T 22-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 JE55_RS10620 243a3115330f4b903751e9f4a5aae0a2 259 SUPERFAMILY SSF53474 11 246 3.98E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS10620 243a3115330f4b903751e9f4a5aae0a2 259 Pfam PF00975 Thioesterase domain 20 240 2.8E-33 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 Pfam PF01380 SIS domain 44 175 5.3E-31 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 Gene3D G3DSA:3.10.580.10 198 322 6.5E-42 T 22-04-2016 JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 PANTHER PTHR38418 1 320 1.3E-38 T 22-04-2016 JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 48 317 6.0E-112 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 SMART SM00116 213 261 0.1 T 22-04-2016 IPR000644 CBS domain JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 SMART SM00116 278 326 1.5 T 22-04-2016 IPR000644 CBS domain JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 SUPERFAMILY SSF53697 11 323 5.12E-71 T 22-04-2016 JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 Pfam PF00571 CBS domain 204 260 5.4E-8 T 22-04-2016 IPR000644 CBS domain JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 Pfam PF00571 CBS domain 273 323 5.3E-9 T 22-04-2016 IPR000644 CBS domain JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 PIRSF PIRSF004692 2 327 1.3E-133 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 PANTHER PTHR38418:SF1 1 320 1.3E-38 T 22-04-2016 JE55_RS11195 293634400c89d906d9294bff297ce8a8 327 Gene3D G3DSA:3.40.50.10490 14 197 6.1E-54 T 22-04-2016 JE55_RS11580 2473f3d71f6f25c7a54ca7193b12cf87 259 PANTHER PTHR32183 68 228 1.4E-17 T 22-04-2016 JE55_RS11580 2473f3d71f6f25c7a54ca7193b12cf87 259 Gene3D G3DSA:3.40.50.150 87 258 3.9E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS11580 2473f3d71f6f25c7a54ca7193b12cf87 259 PANTHER PTHR32183:SF6 68 228 1.4E-17 T 22-04-2016 JE55_RS11580 2473f3d71f6f25c7a54ca7193b12cf87 259 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 74 245 1.5E-34 T 22-04-2016 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67 JE55_RS11580 2473f3d71f6f25c7a54ca7193b12cf87 259 SUPERFAMILY SSF53335 71 258 3.27E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS17630 b955b211b86fa785d116541ee9fbec2c 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 JE55_RS17630 b955b211b86fa785d116541ee9fbec2c 486 PANTHER PTHR11699:SF49 1 484 2.1E-292 T 22-04-2016 JE55_RS17630 b955b211b86fa785d116541ee9fbec2c 486 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 34 480 2.5E-221 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 JE55_RS17630 b955b211b86fa785d116541ee9fbec2c 486 SUPERFAMILY SSF53720 7 484 6.28E-172 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS17630 b955b211b86fa785d116541ee9fbec2c 486 PANTHER PTHR11699 1 484 2.1E-292 T 22-04-2016 JE55_RS17630 b955b211b86fa785d116541ee9fbec2c 486 Pfam PF00171 Aldehyde dehydrogenase family 23 480 3.4E-169 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS17630 b955b211b86fa785d116541ee9fbec2c 486 Gene3D G3DSA:3.40.309.10 273 457 1.5E-71 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS17630 b955b211b86fa785d116541ee9fbec2c 486 Gene3D G3DSA:3.40.605.10 13 272 3.9E-102 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS17630 b955b211b86fa785d116541ee9fbec2c 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 JE55_RS04940 00de721c5624a95515dd3ff749c2f146 400 Gene3D G3DSA:3.30.1950.10 116 193 1.3E-29 T 22-04-2016 JE55_RS04940 00de721c5624a95515dd3ff749c2f146 400 Pfam PF10531 SLBB domain 204 256 1.8E-7 T 22-04-2016 IPR019554 Soluble ligand binding domain JE55_RS04940 00de721c5624a95515dd3ff749c2f146 400 Pfam PF10531 SLBB domain 288 334 0.0035 T 22-04-2016 IPR019554 Soluble ligand binding domain JE55_RS04940 00de721c5624a95515dd3ff749c2f146 400 Pfam PF02563 Polysaccharide biosynthesis/export protein 108 197 1.0E-26 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 JE55_RS04940 00de721c5624a95515dd3ff749c2f146 400 Gene3D G3DSA:3.10.560.10 269 371 1.8E-26 T 22-04-2016 JE55_RS04940 00de721c5624a95515dd3ff749c2f146 400 Gene3D G3DSA:3.10.560.10 194 265 2.1E-23 T 22-04-2016 JE55_RS04940 00de721c5624a95515dd3ff749c2f146 400 PANTHER PTHR33619 149 390 7.3E-51 T 22-04-2016 JE55_RS04940 00de721c5624a95515dd3ff749c2f146 400 PANTHER PTHR33619 107 131 7.3E-51 T 22-04-2016 JE55_RS08090 7c8d98c89defe66378b3d7a01abc08d3 207 PANTHER PTHR30086:SF14 1 200 1.5E-36 T 22-04-2016 JE55_RS08090 7c8d98c89defe66378b3d7a01abc08d3 207 Pfam PF01810 LysE type translocator 15 199 3.9E-23 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS08090 7c8d98c89defe66378b3d7a01abc08d3 207 PANTHER PTHR30086 1 200 1.5E-36 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS08090 7c8d98c89defe66378b3d7a01abc08d3 207 PIRSF PIRSF006324 1 206 2.2E-50 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS11920 c6f6ecd9c7c871fed38a5dc4ebcfe33e 583 PANTHER PTHR32089:SF63 203 517 4.9E-122 T 22-04-2016 JE55_RS11920 c6f6ecd9c7c871fed38a5dc4ebcfe33e 583 SMART SM00283 267 514 3.8E-91 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS11920 c6f6ecd9c7c871fed38a5dc4ebcfe33e 583 Gene3D G3DSA:3.30.450.20 20 114 7.8E-24 T 22-04-2016 JE55_RS11920 c6f6ecd9c7c871fed38a5dc4ebcfe33e 583 SMART SM00086 80 121 1.2E-4 T 22-04-2016 IPR001610 PAC motif JE55_RS11920 c6f6ecd9c7c871fed38a5dc4ebcfe33e 583 Gene3D G3DSA:1.10.287.950 282 486 2.6E-57 T 22-04-2016 JE55_RS11920 c6f6ecd9c7c871fed38a5dc4ebcfe33e 583 SUPERFAMILY SSF55785 21 114 2.27E-25 T 22-04-2016 IPR000014 PAS domain JE55_RS11920 c6f6ecd9c7c871fed38a5dc4ebcfe33e 583 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 513 9.1E-57 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS11920 c6f6ecd9c7c871fed38a5dc4ebcfe33e 583 Pfam PF08447 PAS fold 31 114 1.6E-13 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 JE55_RS11920 c6f6ecd9c7c871fed38a5dc4ebcfe33e 583 PANTHER PTHR32089 203 517 4.9E-122 T 22-04-2016 JE55_RS11920 c6f6ecd9c7c871fed38a5dc4ebcfe33e 583 SUPERFAMILY SSF58104 239 515 5.1E-70 T 22-04-2016 JE55_RS11920 c6f6ecd9c7c871fed38a5dc4ebcfe33e 583 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 114 2.1E-11 T 22-04-2016 IPR000014 PAS domain JE55_RS12495 c86e9de99169004610d189df2a499c06 463 Gene3D G3DSA:1.10.1040.10 267 455 5.6E-54 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS12495 c86e9de99169004610d189df2a499c06 463 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 10 172 2.9E-33 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 JE55_RS12495 c86e9de99169004610d189df2a499c06 463 PANTHER PTHR30562 9 461 4.4E-150 T 22-04-2016 JE55_RS12495 c86e9de99169004610d189df2a499c06 463 PANTHER PTHR30562:SF4 9 461 4.4E-150 T 22-04-2016 JE55_RS12495 c86e9de99169004610d189df2a499c06 463 Gene3D G3DSA:3.40.50.720 5 266 3.1E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12495 c86e9de99169004610d189df2a499c06 463 PRINTS PR00084 Mannitol dehydrogenase signature 163 176 5.3E-17 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 JE55_RS12495 c86e9de99169004610d189df2a499c06 463 PRINTS PR00084 Mannitol dehydrogenase signature 203 216 5.3E-17 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 JE55_RS12495 c86e9de99169004610d189df2a499c06 463 PRINTS PR00084 Mannitol dehydrogenase signature 11 21 5.3E-17 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 JE55_RS12495 c86e9de99169004610d189df2a499c06 463 PRINTS PR00084 Mannitol dehydrogenase signature 233 248 5.3E-17 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 JE55_RS12495 c86e9de99169004610d189df2a499c06 463 SUPERFAMILY SSF48179 268 454 1.84E-46 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS12495 c86e9de99169004610d189df2a499c06 463 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 202 433 6.7E-78 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 JE55_RS12495 c86e9de99169004610d189df2a499c06 463 SUPERFAMILY SSF51735 6 267 8.66E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.9E-33 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 7.7E-129 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 SMART SM01383 42 118 5.6E-45 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 46.338 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 PANTHER PTHR13691 1 275 2.2E-139 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 PANTHER PTHR13691:SF5 1 275 2.2E-139 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 SMART SM01382 124 252 7.9E-89 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 Gene3D G3DSA:2.30.30.30 118 195 1.5E-32 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 SUPERFAMILY SSF50104 127 272 3.25E-60 T 22-04-2016 IPR008991 Translation protein SH3-like domain JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 SUPERFAMILY SSF50249 2 124 9.94E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 6.4E-56 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 Gene3D G3DSA:4.10.950.10 196 274 2.1E-34 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 PIRSF PIRSF002158 10 275 1.4E-98 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07370 283fea99d9e2826c39710a7817027a20 275 Gene3D G3DSA:2.40.50.140 1 114 2.1E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS00005 2c20694ea409d40326cfc1034583dfc5 281 Pfam PF13284 Domain of unknown function (DUF4072) 5 51 8.4E-17 T 22-04-2016 IPR025138 Domain of unknown function DUF4072 JE55_RS00005 2c20694ea409d40326cfc1034583dfc5 281 Pfam PF12710 haloacid dehalogenase-like hydrolase 78 246 2.0E-20 T 22-04-2016 JE55_RS00005 2c20694ea409d40326cfc1034583dfc5 281 Gene3D G3DSA:3.40.50.1000 138 268 3.4E-38 T 22-04-2016 IPR023214 HAD-like domain JE55_RS00005 2c20694ea409d40326cfc1034583dfc5 281 SUPERFAMILY SSF56784 67 278 5.29E-44 T 22-04-2016 IPR023214 HAD-like domain JE55_RS00005 2c20694ea409d40326cfc1034583dfc5 281 PANTHER PTHR10000:SF7 75 280 2.7E-74 T 22-04-2016 JE55_RS00005 2c20694ea409d40326cfc1034583dfc5 281 Gene3D G3DSA:1.10.150.210 86 137 5.9E-25 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 JE55_RS00005 2c20694ea409d40326cfc1034583dfc5 281 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 71 279 5.2E-66 T 22-04-2016 JE55_RS00005 2c20694ea409d40326cfc1034583dfc5 281 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 76 247 5.2E-29 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 JE55_RS00005 2c20694ea409d40326cfc1034583dfc5 281 PANTHER PTHR10000 75 280 2.7E-74 T 22-04-2016 JE55_RS10775 e51587af51e349b1422e29733942ac24 237 PANTHER PTHR23427:SF2 9 214 2.0E-17 T 22-04-2016 JE55_RS10775 e51587af51e349b1422e29733942ac24 237 Pfam PF02104 SURF1 family 13 216 5.6E-33 T 22-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 JE55_RS10775 e51587af51e349b1422e29733942ac24 237 PANTHER PTHR23427 9 214 2.0E-17 T 22-04-2016 JE55_RS00035 d76ea594df5273fbce4c42804615faa5 190 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 11 70 7.1E-31 T 22-04-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal JE55_RS00035 d76ea594df5273fbce4c42804615faa5 190 Pfam PF05233 PHB accumulation regulatory domain 126 165 2.1E-16 T 22-04-2016 IPR007897 PHB accumulation regulatory JE55_RS00035 d76ea594df5273fbce4c42804615faa5 190 Pfam PF05233 PHB accumulation regulatory domain 75 113 4.4E-19 T 22-04-2016 IPR007897 PHB accumulation regulatory JE55_RS00035 d76ea594df5273fbce4c42804615faa5 190 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 10 116 1.7E-45 T 22-04-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR JE55_RS05090 3490d4b7feab52a4d3f31e063c2a0bb7 578 Pfam PF05159 Capsule polysaccharide biosynthesis protein 131 195 6.6E-11 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 JE55_RS05090 3490d4b7feab52a4d3f31e063c2a0bb7 578 Pfam PF05159 Capsule polysaccharide biosynthesis protein 377 504 1.8E-24 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 JE55_RS04070 b2c598c6dbb7ac04c3e2b3e1c369c1cf 241 Gene3D G3DSA:3.40.50.300 1 237 1.1E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04070 b2c598c6dbb7ac04c3e2b3e1c369c1cf 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS04070 b2c598c6dbb7ac04c3e2b3e1c369c1cf 241 SUPERFAMILY SSF52540 1 235 2.27E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04070 b2c598c6dbb7ac04c3e2b3e1c369c1cf 241 PANTHER PTHR24220:SF317 3 240 2.9E-163 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 JE55_RS04070 b2c598c6dbb7ac04c3e2b3e1c369c1cf 241 Pfam PF00005 ABC transporter 18 165 1.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS04070 b2c598c6dbb7ac04c3e2b3e1c369c1cf 241 PIRSF PIRSF039085 1 241 2.7E-99 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 JE55_RS04070 b2c598c6dbb7ac04c3e2b3e1c369c1cf 241 SMART SM00382 26 213 3.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS04070 b2c598c6dbb7ac04c3e2b3e1c369c1cf 241 PANTHER PTHR24220 3 240 2.9E-163 T 22-04-2016 JE55_RS17990 9ea27bf1a3ca22def7fb26f8b5128e74 53 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 26 3.2E-14 T 22-04-2016 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545|UniPathway: UPA00705 JE55_RS17990 9ea27bf1a3ca22def7fb26f8b5128e74 53 Pfam PF08173 Membrane bound YbgT-like protein 1 26 6.4E-14 T 22-04-2016 IPR012994 Membrane bound YbgT-like JE55_RS00475 7e47e5d3c8c49ee0b03e4546aa9742cd 301 SUPERFAMILY SSF51735 3 161 8.31E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00475 7e47e5d3c8c49ee0b03e4546aa9742cd 301 PANTHER PTHR22981 1 291 4.7E-124 T 22-04-2016 JE55_RS00475 7e47e5d3c8c49ee0b03e4546aa9742cd 301 Gene3D G3DSA:1.10.1040.10 163 288 8.2E-41 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS00475 7e47e5d3c8c49ee0b03e4546aa9742cd 301 PANTHER PTHR22981:SF70 1 291 4.7E-124 T 22-04-2016 JE55_RS00475 7e47e5d3c8c49ee0b03e4546aa9742cd 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 JE55_RS00475 7e47e5d3c8c49ee0b03e4546aa9742cd 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 283 5.0E-38 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 JE55_RS00475 7e47e5d3c8c49ee0b03e4546aa9742cd 301 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 290 1.3E-118 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 JE55_RS00475 7e47e5d3c8c49ee0b03e4546aa9742cd 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 160 9.5E-46 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 JE55_RS00475 7e47e5d3c8c49ee0b03e4546aa9742cd 301 PIRSF PIRSF000103 1 290 6.1E-73 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 JE55_RS00475 7e47e5d3c8c49ee0b03e4546aa9742cd 301 Gene3D G3DSA:3.40.50.720 2 161 7.6E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00475 7e47e5d3c8c49ee0b03e4546aa9742cd 301 SUPERFAMILY SSF48179 162 288 1.01E-36 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS10175 3df3a8f8300052379946833589f7d8d7 202 Gene3D G3DSA:3.40.30.10 15 200 3.1E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10175 3df3a8f8300052379946833589f7d8d7 202 Pfam PF02630 SCO1/SenC 44 178 4.2E-25 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC JE55_RS10175 3df3a8f8300052379946833589f7d8d7 202 PANTHER PTHR12151 47 200 3.3E-34 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC JE55_RS10175 3df3a8f8300052379946833589f7d8d7 202 PANTHER PTHR12151:SF0 47 200 3.3E-34 T 22-04-2016 JE55_RS10175 3df3a8f8300052379946833589f7d8d7 202 SUPERFAMILY SSF52833 45 199 1.03E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS15105 12efcf62137ed9305ac2f268ea56e7c0 308 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 244 299 3.2E-11 T 22-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 JE55_RS15105 12efcf62137ed9305ac2f268ea56e7c0 308 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 14 163 4.0E-39 T 22-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 JE55_RS15105 12efcf62137ed9305ac2f268ea56e7c0 308 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 13 300 2.1E-84 T 22-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 JE55_RS03535 d53844ee3bb303fe32c4a5a984165bf3 303 PANTHER PTHR11614 23 300 7.6E-85 T 22-04-2016 JE55_RS03535 d53844ee3bb303fe32c4a5a984165bf3 303 SUPERFAMILY SSF53474 8 299 4.88E-44 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS03535 d53844ee3bb303fe32c4a5a984165bf3 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 238 252 2.9E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS03535 d53844ee3bb303fe32c4a5a984165bf3 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 122 135 2.9E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS03535 d53844ee3bb303fe32c4a5a984165bf3 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 90 2.9E-7 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS03535 d53844ee3bb303fe32c4a5a984165bf3 303 Gene3D G3DSA:3.40.50.1820 27 296 1.8E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS03535 d53844ee3bb303fe32c4a5a984165bf3 303 Pfam PF12146 Serine aminopeptidase, S33 46 282 2.9E-78 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 JE55_RS03535 d53844ee3bb303fe32c4a5a984165bf3 303 PANTHER PTHR11614:SF87 23 300 7.6E-85 T 22-04-2016 JE55_RS11605 f4dccf09331cb68183335fece54ac9a6 424 PANTHER PTHR21248:SF5 8 421 5.6E-70 T 22-04-2016 JE55_RS11605 f4dccf09331cb68183335fece54ac9a6 424 Hamap MF_01917 Cardiolipin synthase B [clsB]. 25 424 42.294 T 22-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 JE55_RS11605 f4dccf09331cb68183335fece54ac9a6 424 SUPERFAMILY SSF56024 23 196 2.88E-38 T 22-04-2016 JE55_RS11605 f4dccf09331cb68183335fece54ac9a6 424 PANTHER PTHR21248 8 421 5.6E-70 T 22-04-2016 JE55_RS11605 f4dccf09331cb68183335fece54ac9a6 424 SMART SM00155 326 353 0.53 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 JE55_RS11605 f4dccf09331cb68183335fece54ac9a6 424 SMART SM00155 125 152 6.4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 JE55_RS11605 f4dccf09331cb68183335fece54ac9a6 424 Gene3D G3DSA:3.30.870.10 245 389 8.3E-32 T 22-04-2016 JE55_RS11605 f4dccf09331cb68183335fece54ac9a6 424 Gene3D G3DSA:3.30.870.10 26 200 2.5E-36 T 22-04-2016 JE55_RS11605 f4dccf09331cb68183335fece54ac9a6 424 Pfam PF13091 PLD-like domain 256 367 7.5E-25 T 22-04-2016 IPR025202 Phospholipase D-like domain JE55_RS11605 f4dccf09331cb68183335fece54ac9a6 424 Pfam PF13091 PLD-like domain 47 150 3.0E-13 T 22-04-2016 IPR025202 Phospholipase D-like domain JE55_RS11605 f4dccf09331cb68183335fece54ac9a6 424 SUPERFAMILY SSF56024 235 397 2.47E-33 T 22-04-2016 JE55_RS05425 2c9c6f763fa9dc5325483d0bdbdbab0b 186 Pfam PF04264 YceI-like domain 27 184 2.7E-34 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JE55_RS05425 2c9c6f763fa9dc5325483d0bdbdbab0b 186 PANTHER PTHR34406 1 184 3.7E-32 T 22-04-2016 JE55_RS05425 2c9c6f763fa9dc5325483d0bdbdbab0b 186 Gene3D G3DSA:2.40.128.110 28 186 8.7E-43 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JE55_RS05425 2c9c6f763fa9dc5325483d0bdbdbab0b 186 PANTHER PTHR34406:SF1 1 184 3.7E-32 T 22-04-2016 JE55_RS05425 2c9c6f763fa9dc5325483d0bdbdbab0b 186 SMART SM00867 25 185 1.9E-46 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JE55_RS05425 2c9c6f763fa9dc5325483d0bdbdbab0b 186 SUPERFAMILY SSF101874 27 186 1.31E-43 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JE55_RS28515 74c5e92e144f3b47418c316434b481f9 98 Pfam PF00990 Diguanylate cyclase, GGDEF domain 4 94 7.3E-26 T 22-04-2016 IPR000160 GGDEF domain JE55_RS28515 74c5e92e144f3b47418c316434b481f9 98 PANTHER PTHR10799 27 97 1.6E-14 T 22-04-2016 JE55_RS28515 74c5e92e144f3b47418c316434b481f9 98 SUPERFAMILY SSF55073 8 96 1.57E-24 T 22-04-2016 IPR029787 Nucleotide cyclase JE55_RS28515 74c5e92e144f3b47418c316434b481f9 98 Gene3D G3DSA:3.30.70.270 4 96 9.3E-30 T 22-04-2016 JE55_RS28515 74c5e92e144f3b47418c316434b481f9 98 SMART SM00267 1 98 1.7E-4 T 22-04-2016 IPR000160 GGDEF domain JE55_RS28515 74c5e92e144f3b47418c316434b481f9 98 PANTHER PTHR10799:SF774 27 97 1.6E-14 T 22-04-2016 JE55_RS28515 74c5e92e144f3b47418c316434b481f9 98 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1 97 2.4E-23 T 22-04-2016 IPR000160 GGDEF domain JE55_RS02715 67230339748ec42f16a34d5d8f85c345 196 Pfam PF04355 SmpA / OmlA family 120 148 1.2E-5 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 JE55_RS00060 7213ac8bec8f65b66d4f7897b8eb3a2c 395 PANTHER PTHR11079:SF73 58 374 6.5E-124 T 22-04-2016 JE55_RS00060 7213ac8bec8f65b66d4f7897b8eb3a2c 395 SMART SM00363 68 126 7.1E-4 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS00060 7213ac8bec8f65b66d4f7897b8eb3a2c 395 PANTHER PTHR11079 58 374 6.5E-124 T 22-04-2016 JE55_RS00060 7213ac8bec8f65b66d4f7897b8eb3a2c 395 SUPERFAMILY SSF55174 68 116 2.52E-8 T 22-04-2016 JE55_RS00060 7213ac8bec8f65b66d4f7897b8eb3a2c 395 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 185 199 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS00060 7213ac8bec8f65b66d4f7897b8eb3a2c 395 Pfam PF00849 RNA pseudouridylate synthase 143 298 1.5E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS00060 7213ac8bec8f65b66d4f7897b8eb3a2c 395 Gene3D G3DSA:3.10.290.10 68 114 2.3E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS00060 7213ac8bec8f65b66d4f7897b8eb3a2c 395 SUPERFAMILY SSF55120 128 366 5.14E-74 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS00060 7213ac8bec8f65b66d4f7897b8eb3a2c 395 Pfam PF01479 S4 domain 68 113 1.3E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS00060 7213ac8bec8f65b66d4f7897b8eb3a2c 395 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 66 363 6.5E-90 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 SUPERFAMILY SSF110942 517 628 6.8E-38 T 22-04-2016 JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 PRINTS PR00775 90kDa heat shock protein signature 74 91 1.87E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 PRINTS PR00775 90kDa heat shock protein signature 4 24 1.87E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 PRINTS PR00775 90kDa heat shock protein signature 25 47 1.87E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 PRINTS PR00775 90kDa heat shock protein signature 171 188 1.87E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 PRINTS PR00775 90kDa heat shock protein signature 119 141 1.87E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 PRINTS PR00775 90kDa heat shock protein signature 92 109 1.87E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 PRINTS PR00775 90kDa heat shock protein signature 189 207 1.87E-60 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 PANTHER PTHR11528:SF44 4 627 0.0 T 22-04-2016 JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 PIRSF PIRSF002583 1 632 2.0E-213 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 SUPERFAMILY SSF54211 233 492 3.57E-97 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 Gene3D G3DSA:3.30.565.10 4 240 3.6E-81 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 181 3.2E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 PANTHER PTHR11528 4 627 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 Pfam PF00183 Hsp90 protein 216 628 5.0E-130 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 SMART SM00387 26 183 3.2E-6 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 24 33 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 SUPERFAMILY SSF55874 3 215 5.76E-65 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13750 ab870f674650f8a7ae6ec88273e0cb0d 632 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 628 32.93 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 JE55_RS05810 b1e65e64da98ecebbdc0f3c04e80ac7f 336 TIGRFAM TIGR02961 allantoicase: allantoicase 17 334 3.1E-144 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS05810 b1e65e64da98ecebbdc0f3c04e80ac7f 336 Hamap MF_00813 Probable allantoicase [alc]. 6 336 57.675 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS05810 b1e65e64da98ecebbdc0f3c04e80ac7f 336 PANTHER PTHR12045 3 333 1.3E-137 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS05810 b1e65e64da98ecebbdc0f3c04e80ac7f 336 Gene3D G3DSA:2.60.120.260 174 335 6.3E-54 T 22-04-2016 IPR008979 Galactose-binding domain-like JE55_RS05810 b1e65e64da98ecebbdc0f3c04e80ac7f 336 Gene3D G3DSA:2.60.120.260 10 173 1.2E-59 T 22-04-2016 IPR008979 Galactose-binding domain-like JE55_RS05810 b1e65e64da98ecebbdc0f3c04e80ac7f 336 SUPERFAMILY SSF49785 8 174 1.28E-59 T 22-04-2016 IPR008979 Galactose-binding domain-like JE55_RS05810 b1e65e64da98ecebbdc0f3c04e80ac7f 336 SUPERFAMILY SSF49785 181 334 1.02E-53 T 22-04-2016 IPR008979 Galactose-binding domain-like JE55_RS05810 b1e65e64da98ecebbdc0f3c04e80ac7f 336 Pfam PF03561 Allantoicase repeat 193 333 2.0E-43 T 22-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS05810 b1e65e64da98ecebbdc0f3c04e80ac7f 336 Pfam PF03561 Allantoicase repeat 26 170 1.8E-45 T 22-04-2016 IPR015908 Allantoicase domain GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS05810 b1e65e64da98ecebbdc0f3c04e80ac7f 336 PIRSF PIRSF016516 2 336 1.2E-149 T 22-04-2016 IPR005164 Allantoicase GO:0000256|GO:0004037 KEGG: 00230+3.5.3.4|MetaCyc: PWY-5697|UniPathway: UPA00395 JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 366 2.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 2.4E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 SMART SM00387 317 428 2.1E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 SUPERFAMILY SSF47384 202 277 5.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 SMART SM00388 219 277 4.5E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 SUPERFAMILY SSF55874 280 425 5.11E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 Gene3D G3DSA:3.30.565.10 280 427 2.4E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 PANTHER PTHR24423:SF427 125 435 5.3E-38 T 22-04-2016 JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 275 1.8E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 SMART SM00304 166 218 2.1E-5 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 Pfam PF00672 HAMP domain 148 213 5.8E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 PANTHER PTHR24423 125 435 5.3E-38 T 22-04-2016 JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 321 422 1.1E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS13475 9864b3598cd7c35ebe3787687f82db79 437 Gene3D G3DSA:1.10.287.130 209 272 5.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS05355 841d61ce955570b61876333dc4c33f67 154 Pfam PF01638 HxlR-like helix-turn-helix 21 104 3.7E-23 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type JE55_RS05355 841d61ce955570b61876333dc4c33f67 154 PANTHER PTHR33204 1 149 6.0E-61 T 22-04-2016 JE55_RS05355 841d61ce955570b61876333dc4c33f67 154 PANTHER PTHR33204:SF3 1 149 6.0E-61 T 22-04-2016 JE55_RS05355 841d61ce955570b61876333dc4c33f67 154 SUPERFAMILY SSF46785 6 143 7.44E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05355 841d61ce955570b61876333dc4c33f67 154 Gene3D G3DSA:1.10.10.10 2 110 4.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04405 3730d0d366d522975f92a8fc7624ad19 469 PANTHER PTHR24220 55 267 3.1E-97 T 22-04-2016 JE55_RS04405 3730d0d366d522975f92a8fc7624ad19 469 PANTHER PTHR24220 9 19 3.1E-97 T 22-04-2016 JE55_RS04405 3730d0d366d522975f92a8fc7624ad19 469 Gene3D G3DSA:3.40.50.300 9 18 1.7E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04405 3730d0d366d522975f92a8fc7624ad19 469 Gene3D G3DSA:3.40.50.300 54 270 1.7E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04405 3730d0d366d522975f92a8fc7624ad19 469 SMART SM00382 67 238 7.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS04405 3730d0d366d522975f92a8fc7624ad19 469 Pfam PF00005 ABC transporter 58 190 2.6E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS04405 3730d0d366d522975f92a8fc7624ad19 469 SUPERFAMILY SSF52540 54 251 3.91E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04405 3730d0d366d522975f92a8fc7624ad19 469 Pfam PF14524 Wzt C-terminal domain 312 449 1.8E-30 T 22-04-2016 IPR029439 Wzt, C-terminal JE55_RS04405 3730d0d366d522975f92a8fc7624ad19 469 PANTHER PTHR24220:SF117 55 267 3.1E-97 T 22-04-2016 JE55_RS04405 3730d0d366d522975f92a8fc7624ad19 469 PANTHER PTHR24220:SF117 9 19 3.1E-97 T 22-04-2016 JE55_RS04405 3730d0d366d522975f92a8fc7624ad19 469 Gene3D G3DSA:2.70.50.60 308 448 2.6E-35 T 22-04-2016 JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 Gene3D G3DSA:3.50.50.60 6 237 3.7E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 632 1.2E-272 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 SUPERFAMILY SSF51905 6 66 1.15E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 SUPERFAMILY SSF51905 97 262 1.15E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 PANTHER PTHR11806:SF0 1 652 0.0 T 22-04-2016 JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 274 288 - T 22-04-2016 IPR020595 MnmG-related, conserved site JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 PANTHER PTHR11806 1 652 0.0 T 22-04-2016 JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 369 392 - T 22-04-2016 IPR020595 MnmG-related, conserved site JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 Pfam PF01134 Glucose inhibited division protein A 8 400 1.9E-165 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 SMART SM01228 556 627 1.6E-41 T 22-04-2016 JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 634 42.541 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 JE55_RS08480 fdcac3b4b5353df6247f50cb50d93121 657 Pfam PF13932 GidA associated domain 403 626 4.5E-71 T 22-04-2016 IPR026904 GidA associated domain 3 JE55_RS05890 b6fb70e0355441766f59ea271cff416e 333 Gene3D G3DSA:3.30.1330.10 6 142 7.3E-45 T 22-04-2016 IPR016188 PurM-like, N-terminal domain JE55_RS05890 b6fb70e0355441766f59ea271cff416e 333 SUPERFAMILY SSF55326 5 141 1.45E-33 T 22-04-2016 JE55_RS05890 b6fb70e0355441766f59ea271cff416e 333 Gene3D G3DSA:3.90.650.10 149 330 8.4E-43 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS05890 b6fb70e0355441766f59ea271cff416e 333 PIRSF PIRSF005303 4 330 5.0E-76 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 JE55_RS05890 b6fb70e0355441766f59ea271cff416e 333 Pfam PF00586 AIR synthase related protein, N-terminal domain 33 141 2.6E-24 T 22-04-2016 IPR016188 PurM-like, N-terminal domain JE55_RS05890 b6fb70e0355441766f59ea271cff416e 333 SUPERFAMILY SSF56042 147 300 1.13E-32 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS05890 b6fb70e0355441766f59ea271cff416e 333 PANTHER PTHR30270 6 330 1.3E-102 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 JE55_RS05890 b6fb70e0355441766f59ea271cff416e 333 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 6 327 28.077 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 JE55_RS05890 b6fb70e0355441766f59ea271cff416e 333 Pfam PF02769 AIR synthase related protein, C-terminal domain 154 298 2.0E-8 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain JE55_RS05890 b6fb70e0355441766f59ea271cff416e 333 PANTHER PTHR30270:SF0 6 330 1.3E-102 T 22-04-2016 JE55_RS05890 b6fb70e0355441766f59ea271cff416e 333 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 8 330 6.5E-94 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 249 7.5E-48 T 22-04-2016 JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.0E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.0E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 190 1.3E-5 T 22-04-2016 JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 Gene3D G3DSA:3.40.50.720 3 250 5.8E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 SUPERFAMILY SSF51735 11 250 4.39E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.9E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.9E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.9E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.9E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.9E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.9E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 PANTHER PTHR24321 7 251 5.5E-29 T 22-04-2016 JE55_RS08060 8b23a239a7b9a495ede6c47efafa1037 252 PANTHER PTHR24321:SF6 7 251 5.5E-29 T 22-04-2016 JE55_RS17685 3376fda5a755b3e6be1a6c2ba6a27f2c 195 Gene3D G3DSA:3.30.1330.110 1 192 1.2E-80 T 22-04-2016 IPR009569 Amino acid synthesis, putative JE55_RS17685 3376fda5a755b3e6be1a6c2ba6a27f2c 195 SUPERFAMILY SSF160519 1 192 8.37E-72 T 22-04-2016 IPR009569 Amino acid synthesis, putative JE55_RS17685 3376fda5a755b3e6be1a6c2ba6a27f2c 195 Pfam PF06684 Amino acid synthesis 5 181 5.1E-70 T 22-04-2016 IPR009569 Amino acid synthesis, putative JE55_RS18085 c60b21b8109869261735f67c35bfc6fb 254 Gene3D G3DSA:3.20.20.150 1 253 1.5E-80 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS18085 c60b21b8109869261735f67c35bfc6fb 254 Pfam PF01261 Xylose isomerase-like TIM barrel 26 202 2.7E-11 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS18085 c60b21b8109869261735f67c35bfc6fb 254 SUPERFAMILY SSF51658 1 252 2.21E-57 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 Gene3D G3DSA:1.10.10.10 1 85 3.5E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 SUPERFAMILY SSF53850 90 290 1.24E-36 T 22-04-2016 JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 PANTHER PTHR30419 1 289 1.0E-108 T 22-04-2016 JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.1E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 SUPERFAMILY SSF46785 1 85 2.84E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 Gene3D G3DSA:3.40.190.10 90 174 1.4E-13 T 22-04-2016 JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 Pfam PF03466 LysR substrate binding domain 89 290 1.9E-43 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 Gene3D G3DSA:3.40.190.10 175 264 7.7E-28 T 22-04-2016 JE55_RS08720 7b46435a9a510167e5bee5f55bddfa1e 307 PANTHER PTHR30419:SF8 1 289 1.0E-108 T 22-04-2016 JE55_RS12190 cbc91378625be7c10c2db93b819ea22f 237 Pfam PF03741 Integral membrane protein TerC family 15 190 1.2E-46 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 JE55_RS12190 cbc91378625be7c10c2db93b819ea22f 237 PANTHER PTHR30060 1 221 2.6E-38 T 22-04-2016 JE55_RS12190 cbc91378625be7c10c2db93b819ea22f 237 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 12 191 2.5E-72 T 22-04-2016 IPR022301 Integral membrane protein YjbE JE55_RS09870 c2dc00459ad1b897028665bee883fc97 342 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 27 325 5.1E-36 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD JE55_RS09870 c2dc00459ad1b897028665bee883fc97 342 TIGRFAM TIGR03476 HpnL: putative membrane protein 19 334 1.5E-114 T 22-04-2016 JE55_RS12690 83addd00678db931b474ee90c2751ebd 263 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 7 252 4.3E-86 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 JE55_RS12690 83addd00678db931b474ee90c2751ebd 263 Pfam PF02348 Cytidylyltransferase 8 232 2.2E-55 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 JE55_RS12690 83addd00678db931b474ee90c2751ebd 263 SUPERFAMILY SSF53448 7 258 1.53E-59 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS12690 83addd00678db931b474ee90c2751ebd 263 PANTHER PTHR21485:SF4 7 261 5.9E-103 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 JE55_RS12690 83addd00678db931b474ee90c2751ebd 263 Gene3D G3DSA:3.90.550.10 7 260 3.4E-80 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS12690 83addd00678db931b474ee90c2751ebd 263 PANTHER PTHR21485 7 261 5.9E-103 T 22-04-2016 JE55_RS12690 83addd00678db931b474ee90c2751ebd 263 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 5 259 42.041 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 JE55_RS05820 b7e2e1ebcc9b76bb2622799e3df36cb9 230 PANTHER PTHR11751 9 108 6.0E-25 T 22-04-2016 JE55_RS05820 b7e2e1ebcc9b76bb2622799e3df36cb9 230 SMART SM00895 92 216 9.4E-24 T 22-04-2016 IPR011711 GntR, C-terminal JE55_RS05820 b7e2e1ebcc9b76bb2622799e3df36cb9 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 7.8E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS05820 b7e2e1ebcc9b76bb2622799e3df36cb9 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 7.8E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS05820 b7e2e1ebcc9b76bb2622799e3df36cb9 230 SUPERFAMILY SSF48008 89 220 8.11E-29 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS05820 b7e2e1ebcc9b76bb2622799e3df36cb9 230 SUPERFAMILY SSF46785 7 75 3.52E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05820 b7e2e1ebcc9b76bb2622799e3df36cb9 230 Gene3D G3DSA:1.10.10.10 5 73 1.0E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05820 b7e2e1ebcc9b76bb2622799e3df36cb9 230 Pfam PF07729 FCD domain 92 215 1.5E-26 T 22-04-2016 IPR011711 GntR, C-terminal JE55_RS05820 b7e2e1ebcc9b76bb2622799e3df36cb9 230 SMART SM00345 12 71 1.9E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS05820 b7e2e1ebcc9b76bb2622799e3df36cb9 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 9.8E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS05820 b7e2e1ebcc9b76bb2622799e3df36cb9 230 Gene3D G3DSA:1.20.120.530 89 220 4.6E-32 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS04270 16092fd389d78ad71db8ad9c936f03b8 287 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 43 287 7.7E-111 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD JE55_RS04270 16092fd389d78ad71db8ad9c936f03b8 287 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 265 286 2.0E-6 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JE55_RS04270 16092fd389d78ad71db8ad9c936f03b8 287 PANTHER PTHR24220:SF366 45 287 8.8E-118 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD JE55_RS04270 16092fd389d78ad71db8ad9c936f03b8 287 Pfam PF00005 ABC transporter 59 213 1.9E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS04270 16092fd389d78ad71db8ad9c936f03b8 287 Gene3D G3DSA:3.40.50.300 42 282 1.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04270 16092fd389d78ad71db8ad9c936f03b8 287 SUPERFAMILY SSF52540 43 284 5.97E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04270 16092fd389d78ad71db8ad9c936f03b8 287 PANTHER PTHR24220 45 287 8.8E-118 T 22-04-2016 JE55_RS04270 16092fd389d78ad71db8ad9c936f03b8 287 ProSitePatterns PS00211 ABC transporters family signature. 186 200 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS03615 69accf8746de1b38e48d02eec70b7500 360 SUPERFAMILY SSF53383 2 358 8.29E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS03615 69accf8746de1b38e48d02eec70b7500 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 359 49.224 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 JE55_RS03615 69accf8746de1b38e48d02eec70b7500 360 Gene3D G3DSA:3.90.1150.10 258 358 1.3E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS03615 69accf8746de1b38e48d02eec70b7500 360 PIRSF PIRSF000525 1 360 3.7E-152 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 JE55_RS03615 69accf8746de1b38e48d02eec70b7500 360 PANTHER PTHR21152:SF1 2 358 4.4E-182 T 22-04-2016 JE55_RS03615 69accf8746de1b38e48d02eec70b7500 360 PANTHER PTHR21152 2 358 4.4E-182 T 22-04-2016 JE55_RS03615 69accf8746de1b38e48d02eec70b7500 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 3 358 1.9E-152 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 JE55_RS03615 69accf8746de1b38e48d02eec70b7500 360 Gene3D G3DSA:3.40.640.10 16 257 5.3E-107 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS03615 69accf8746de1b38e48d02eec70b7500 360 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JE55_RS03615 69accf8746de1b38e48d02eec70b7500 360 Pfam PF00266 Aminotransferase class-V 3 348 3.5E-48 T 22-04-2016 IPR000192 Aminotransferase class V domain JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 Gene3D G3DSA:3.90.105.10 137 156 1.1E-21 T 22-04-2016 JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 Gene3D G3DSA:3.90.105.10 22 44 1.1E-21 T 22-04-2016 JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 SMART SM00852 175 345 2.1E-48 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 Gene3D G3DSA:3.40.980.10 317 359 2.4E-65 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 Gene3D G3DSA:3.40.980.10 157 283 2.4E-65 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 PANTHER PTHR10192 317 430 5.6E-138 T 22-04-2016 JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 PANTHER PTHR10192 1 290 5.6E-138 T 22-04-2016 JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 SUPERFAMILY SSF53218 170 279 2.09E-41 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 SUPERFAMILY SSF53218 317 348 2.09E-41 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 SUPERFAMILY SSF63867 355 427 2.75E-13 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 248 281 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 162 1.9E-35 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 Pfam PF03454 MoeA C-terminal region (domain IV) 367 425 1.1E-8 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 Gene3D G3DSA:2.40.340.10 360 426 1.6E-7 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 Gene3D G3DSA:2.170.190.11 45 136 2.0E-28 T 22-04-2016 JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 Pfam PF00994 Probable molybdopterin binding domain 175 343 3.2E-26 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS00330 eb9ad66e18163d54e498233aa1a2aed8 430 SUPERFAMILY SSF63882 1 170 1.15E-50 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS03875 a90682054d6c50e6bc978a12e2cda87e 307 Pfam PF03755 YicC-like family, N-terminal region 2 160 2.3E-38 T 22-04-2016 IPR013527 YicC-like, N-terminal JE55_RS03875 a90682054d6c50e6bc978a12e2cda87e 307 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 307 4.6E-67 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 JE55_RS03875 a90682054d6c50e6bc978a12e2cda87e 307 Pfam PF08340 Domain of unknown function (DUF1732) 223 307 6.3E-32 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 JE55_RS03875 a90682054d6c50e6bc978a12e2cda87e 307 PANTHER PTHR30636 1 307 4.1E-81 T 22-04-2016 JE55_RS01010 eb1644c3e9882af540aafeaaf5eec7e2 313 PANTHER PTHR30237:SF2 10 312 8.3E-85 T 22-04-2016 JE55_RS01010 eb1644c3e9882af540aafeaaf5eec7e2 313 SUPERFAMILY SSF52317 9 167 2.29E-32 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS01010 eb1644c3e9882af540aafeaaf5eec7e2 313 Pfam PF02016 LD-carboxypeptidase 11 294 5.2E-69 T 22-04-2016 IPR003507 Peptidase family S66 JE55_RS01010 eb1644c3e9882af540aafeaaf5eec7e2 313 SUPERFAMILY SSF141986 146 299 1.96E-44 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain JE55_RS01010 eb1644c3e9882af540aafeaaf5eec7e2 313 Gene3D G3DSA:3.50.30.60 176 302 1.6E-44 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain JE55_RS01010 eb1644c3e9882af540aafeaaf5eec7e2 313 PANTHER PTHR30237 10 312 8.3E-85 T 22-04-2016 JE55_RS01010 eb1644c3e9882af540aafeaaf5eec7e2 313 Gene3D G3DSA:3.40.50.10740 10 166 2.1E-40 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain JE55_RS01010 eb1644c3e9882af540aafeaaf5eec7e2 313 PIRSF PIRSF028757 7 309 3.1E-69 T 22-04-2016 IPR003507 Peptidase family S66 JE55_RS06115 1da71d83feffc493660ba5e67ea9fe52 103 SUPERFAMILY SSF141091 1 102 1.44E-37 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 JE55_RS06115 1da71d83feffc493660ba5e67ea9fe52 103 PANTHER PTHR21349 1 101 9.6E-43 T 22-04-2016 JE55_RS06115 1da71d83feffc493660ba5e67ea9fe52 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS06115 1da71d83feffc493660ba5e67ea9fe52 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.005 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS06115 1da71d83feffc493660ba5e67ea9fe52 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.1E-39 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 JE55_RS06115 1da71d83feffc493660ba5e67ea9fe52 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.3E-34 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 377 391 1.0E-23 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 653 664 1.0E-23 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 543 1.0E-23 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 675 685 1.0E-23 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 728 747 1.0E-23 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 Gene3D G3DSA:3.40.50.1000 501 543 1.8E-39 T 22-04-2016 IPR023214 HAD-like domain JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 Gene3D G3DSA:3.40.50.1000 656 747 1.8E-39 T 22-04-2016 IPR023214 HAD-like domain JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 Gene3D G3DSA:3.40.50.1000 748 808 3.3E-13 T 22-04-2016 IPR023214 HAD-like domain JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 SUPERFAMILY SSF47240 67 112 6.76E-8 T 22-04-2016 IPR009078 Ferritin-like superfamily JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 Gene3D G3DSA:2.70.150.10 267 427 6.9E-30 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 Gene3D G3DSA:3.40.1110.10 544 655 4.1E-23 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PANTHER PTHR24093:SF50 166 850 8.9E-215 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 SMART SM00746 70 107 2.8E-8 T 22-04-2016 IPR011017 TRASH domain JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 236 747 1.4E-134 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 531 537 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 Pfam PF04945 YHS domain 69 112 6.2E-15 T 22-04-2016 IPR007029 YHS domain JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 256 747 2.0E-155 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PRINTS PR00943 Copper-transporting ATPase signature 705 722 1.8E-12 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PRINTS PR00943 Copper-transporting ATPase signature 296 315 1.8E-12 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PRINTS PR00943 Copper-transporting ATPase signature 316 334 1.8E-12 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PRINTS PR00943 Copper-transporting ATPase signature 450 464 1.8E-12 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PRINTS PR00943 Copper-transporting ATPase signature 512 527 1.8E-12 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PRINTS PR00943 Copper-transporting ATPase signature 239 258 1.8E-12 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 298 749 2.7E-80 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 Pfam PF00702 haloacid dehalogenase-like hydrolase 525 742 3.4E-39 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 Pfam PF00122 E1-E2 ATPase 297 520 4.9E-63 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 PANTHER PTHR24093 166 850 8.9E-215 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 SUPERFAMILY SSF56784 747 847 2.35E-18 T 22-04-2016 IPR023214 HAD-like domain JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 SUPERFAMILY SSF81665 428 522 1.26E-11 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 SUPERFAMILY SSF81665 296 330 1.26E-11 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 SUPERFAMILY SSF81653 332 427 5.1E-26 T 22-04-2016 JE55_RS09945 0ed1f5772dd27f49add4ef87544e54ec 854 SUPERFAMILY SSF56784 525 747 4.12E-39 T 22-04-2016 IPR023214 HAD-like domain JE55_RS12380 d69250b56cadc9d39c976101ad886c9c 457 Pfam PF00860 Permease family 17 397 1.7E-111 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS12380 d69250b56cadc9d39c976101ad886c9c 457 TIGRFAM TIGR03173 pbuX: xanthine permease 21 430 1.4E-167 T 22-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 JE55_RS12380 d69250b56cadc9d39c976101ad886c9c 457 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 344 364 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 JE55_RS12380 d69250b56cadc9d39c976101ad886c9c 457 PANTHER PTHR11119 1 431 4.4E-128 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS12380 d69250b56cadc9d39c976101ad886c9c 457 PANTHER PTHR11119:SF3 1 431 4.4E-128 T 22-04-2016 JE55_RS12380 d69250b56cadc9d39c976101ad886c9c 457 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 15 428 2.3E-122 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 JE55_RS06685 a46a3e85babfd194b56ed3a4b1bf1cc2 167 SUPERFAMILY SSF117070 17 160 9.02E-30 T 22-04-2016 JE55_RS06685 a46a3e85babfd194b56ed3a4b1bf1cc2 167 SMART SM00769 38 158 6.1E-43 T 22-04-2016 IPR013990 Water stress and hypersensitive response domain GO:0009269 JE55_RS06685 a46a3e85babfd194b56ed3a4b1bf1cc2 167 Gene3D G3DSA:2.60.40.10 52 110 7.4E-8 T 22-04-2016 IPR013783 Immunoglobulin-like fold JE55_RS06685 a46a3e85babfd194b56ed3a4b1bf1cc2 167 Pfam PF03168 Late embryogenesis abundant protein 58 149 2.6E-22 T 22-04-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 SUPERFAMILY SSF50465 331 434 2.54E-29 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 Gene3D G3DSA:2.40.30.10 332 435 1.4E-9 T 22-04-2016 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 PANTHER PTHR23115 369 433 5.1E-61 T 22-04-2016 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 PANTHER PTHR23115 1 350 5.1E-61 T 22-04-2016 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 PANTHER PTHR23115:SF38 369 433 5.1E-61 T 22-04-2016 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 PANTHER PTHR23115:SF38 1 350 5.1E-61 T 22-04-2016 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 Pfam PF00009 Elongation factor Tu GTP binding domain 13 205 7.8E-38 T 22-04-2016 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 Gene3D G3DSA:3.40.50.300 12 227 1.9E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 67 82 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 SUPERFAMILY SSF50447 233 324 9.56E-17 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 13 433 1.7E-158 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 Gene3D G3DSA:2.40.30.10 234 323 8.8E-17 T 22-04-2016 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 SUPERFAMILY SSF52540 13 244 1.38E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 PRINTS PR00315 GTP-binding elongation factor signature 94 104 4.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 PRINTS PR00315 GTP-binding elongation factor signature 74 82 4.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 PRINTS PR00315 GTP-binding elongation factor signature 155 164 4.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 PRINTS PR00315 GTP-binding elongation factor signature 110 121 4.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS13085 ca83088e73219ace4521892ca6b0a1bc 438 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.2E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 JE55_RS04620 67d04277d8bd97b11807677d88a62648 347 Gene3D G3DSA:3.40.50.1980 62 199 8.4E-10 T 22-04-2016 JE55_RS04620 67d04277d8bd97b11807677d88a62648 347 SUPERFAMILY SSF53807 62 339 2.08E-46 T 22-04-2016 JE55_RS04620 67d04277d8bd97b11807677d88a62648 347 Gene3D G3DSA:3.40.50.1980 204 339 9.9E-34 T 22-04-2016 JE55_RS04620 67d04277d8bd97b11807677d88a62648 347 PANTHER PTHR30535:SF7 37 339 5.6E-121 T 22-04-2016 JE55_RS04620 67d04277d8bd97b11807677d88a62648 347 Pfam PF01497 Periplasmic binding protein 68 316 3.5E-23 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 JE55_RS04620 67d04277d8bd97b11807677d88a62648 347 PANTHER PTHR30535 37 339 5.6E-121 T 22-04-2016 JE55_RS18060 942a8e7080089fe81180e76b89186d55 262 Pfam PF10086 Putative membrane peptidase family (DUF2324) 18 241 2.8E-73 T 22-04-2016 IPR011397 Uncharacterised conserved protein UCP033101 JE55_RS18060 942a8e7080089fe81180e76b89186d55 262 PIRSF PIRSF033101 2 257 1.1E-50 T 22-04-2016 IPR011397 Uncharacterised conserved protein UCP033101 JE55_RS03530 7d8c49af4610cd8496a235c145d29824 344 PANTHER PTHR24220:SF455 3 304 1.3E-144 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 JE55_RS03530 7d8c49af4610cd8496a235c145d29824 344 SMART SM00930 265 340 9.5E-33 T 22-04-2016 IPR018449 NIL domain JE55_RS03530 7d8c49af4610cd8496a235c145d29824 344 Pfam PF09383 NIL domain 268 339 6.2E-23 T 22-04-2016 IPR018449 NIL domain JE55_RS03530 7d8c49af4610cd8496a235c145d29824 344 Pfam PF00005 ABC transporter 21 169 4.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS03530 7d8c49af4610cd8496a235c145d29824 344 SUPERFAMILY SSF55021 248 343 1.26E-24 T 22-04-2016 JE55_RS03530 7d8c49af4610cd8496a235c145d29824 344 Gene3D G3DSA:3.40.50.300 1 236 2.1E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03530 7d8c49af4610cd8496a235c145d29824 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS03530 7d8c49af4610cd8496a235c145d29824 344 Gene3D G3DSA:3.30.70.260 237 343 1.0E-32 T 22-04-2016 JE55_RS03530 7d8c49af4610cd8496a235c145d29824 344 PANTHER PTHR24220 3 304 1.3E-144 T 22-04-2016 JE55_RS03530 7d8c49af4610cd8496a235c145d29824 344 SMART SM00382 30 227 8.6E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS03530 7d8c49af4610cd8496a235c145d29824 344 SUPERFAMILY SSF52540 1 240 1.54E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07780 c71616511907dd9bcccc9d3b12a5a786 121 Gene3D G3DSA:1.10.760.10 37 115 3.7E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS07780 c71616511907dd9bcccc9d3b12a5a786 121 SUPERFAMILY SSF46626 11 115 2.22E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS07780 c71616511907dd9bcccc9d3b12a5a786 121 PRINTS PR00606 Class ID cytochrome C signature 56 69 4.5E-18 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 JE55_RS07780 c71616511907dd9bcccc9d3b12a5a786 121 PRINTS PR00606 Class ID cytochrome C signature 106 116 4.5E-18 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 JE55_RS07780 c71616511907dd9bcccc9d3b12a5a786 121 PRINTS PR00606 Class ID cytochrome C signature 79 92 4.5E-18 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 JE55_RS07780 c71616511907dd9bcccc9d3b12a5a786 121 PRINTS PR00606 Class ID cytochrome C signature 41 54 4.5E-18 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 JE55_RS07780 c71616511907dd9bcccc9d3b12a5a786 121 PRINTS PR00606 Class ID cytochrome C signature 94 104 4.5E-18 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 JE55_RS07780 c71616511907dd9bcccc9d3b12a5a786 121 Pfam PF00034 Cytochrome c 38 115 2.8E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12805 3314730483e5ad2d03977541c7153297 169 Pfam PF02643 Uncharacterized ACR, COG1430 61 162 6.7E-31 T 22-04-2016 IPR003795 Protein of unknown function DUF192 JE55_RS12805 3314730483e5ad2d03977541c7153297 169 PANTHER PTHR37953 8 166 1.8E-28 T 22-04-2016 JE55_RS12805 3314730483e5ad2d03977541c7153297 169 PANTHER PTHR37953:SF1 8 166 1.8E-28 T 22-04-2016 JE55_RS12540 6710e4afd6a3de2b886b23c3e107919c 213 SUPERFAMILY SSF102198 3 206 6.41E-58 T 22-04-2016 JE55_RS12540 6710e4afd6a3de2b886b23c3e107919c 213 Hamap MF_01969 Kynurenine formamidase [kynB]. 3 208 43.303 T 22-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 JE55_RS12540 6710e4afd6a3de2b886b23c3e107919c 213 PANTHER PTHR31118 4 205 5.0E-43 T 22-04-2016 JE55_RS12540 6710e4afd6a3de2b886b23c3e107919c 213 Gene3D G3DSA:3.50.30.50 3 206 1.5E-56 T 22-04-2016 JE55_RS12540 6710e4afd6a3de2b886b23c3e107919c 213 Pfam PF04199 Putative cyclase 6 151 4.7E-19 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 JE55_RS12540 6710e4afd6a3de2b886b23c3e107919c 213 TIGRFAM TIGR03035 trp_arylform: arylformamidase 4 208 2.9E-102 T 22-04-2016 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 JE55_RS11810 8b8709161e3dfd212d43a02df9228945 135 PANTHER PTHR11803 9 135 2.4E-27 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family JE55_RS11810 8b8709161e3dfd212d43a02df9228945 135 PANTHER PTHR11803:SF7 9 135 2.4E-27 T 22-04-2016 JE55_RS11810 8b8709161e3dfd212d43a02df9228945 135 Pfam PF01042 Endoribonuclease L-PSP 24 132 3.6E-18 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family JE55_RS11810 8b8709161e3dfd212d43a02df9228945 135 Gene3D G3DSA:3.30.1330.40 11 134 2.0E-30 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS11810 8b8709161e3dfd212d43a02df9228945 135 SUPERFAMILY SSF55298 10 134 1.88E-28 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS04840 9c1a1517d29d032e59997a92d13f395b 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 16 147 1.1E-30 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 JE55_RS04840 9c1a1517d29d032e59997a92d13f395b 149 TIGRFAM TIGR02801 tolR: protein TolR 19 146 3.6E-42 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 JE55_RS04840 9c1a1517d29d032e59997a92d13f395b 149 PANTHER PTHR30558:SF7 1 145 2.6E-34 T 22-04-2016 JE55_RS04840 9c1a1517d29d032e59997a92d13f395b 149 PANTHER PTHR30558 1 145 2.6E-34 T 22-04-2016 JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 446 4.0E-178 T 22-04-2016 JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 447 75.102 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 Pfam PF04055 Radical SAM superfamily 151 327 9.9E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 SMART SM00729 147 366 2.3E-56 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 Gene3D G3DSA:3.80.30.20 146 381 2.4E-78 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 SUPERFAMILY SSF102114 129 374 3.53E-60 T 22-04-2016 JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 443 3.0E-147 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 PANTHER PTHR11918 1 446 1.9E-199 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 1.7E-29 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 Pfam PF01938 TRAM domain 380 446 2.5E-15 T 22-04-2016 IPR002792 TRAM domain JE55_RS11755 37552beb8f0ec6af6a2040fdc997ee38 457 PANTHER PTHR11918:SF43 1 446 1.9E-199 T 22-04-2016 JE55_RS12630 6b23f0b4c88e470f8a1b10cf47f13f47 521 SUPERFAMILY SSF56801 16 520 7.2E-144 T 22-04-2016 JE55_RS12630 6b23f0b4c88e470f8a1b10cf47f13f47 521 Gene3D G3DSA:3.40.50.980 186 344 4.0E-41 T 22-04-2016 JE55_RS12630 6b23f0b4c88e470f8a1b10cf47f13f47 521 PANTHER PTHR24096 30 518 3.1E-141 T 22-04-2016 JE55_RS12630 6b23f0b4c88e470f8a1b10cf47f13f47 521 Pfam PF00501 AMP-binding enzyme 30 427 8.2E-98 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS12630 6b23f0b4c88e470f8a1b10cf47f13f47 521 Gene3D G3DSA:3.40.50.980 24 185 1.3E-31 T 22-04-2016 JE55_RS12630 6b23f0b4c88e470f8a1b10cf47f13f47 521 Gene3D G3DSA:3.30.300.30 424 520 1.9E-28 T 22-04-2016 JE55_RS12630 6b23f0b4c88e470f8a1b10cf47f13f47 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 436 511 1.2E-14 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS12630 6b23f0b4c88e470f8a1b10cf47f13f47 521 ProSitePatterns PS00455 Putative AMP-binding domain signature. 179 190 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS12630 6b23f0b4c88e470f8a1b10cf47f13f47 521 Gene3D G3DSA:2.30.38.10 346 421 1.3E-26 T 22-04-2016 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 Pfam PF05697 Bacterial trigger factor protein (TF) 4 143 6.3E-35 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 Gene3D G3DSA:1.10.3120.10 216 404 9.4E-62 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 PANTHER PTHR30560 5 445 4.1E-107 T 22-04-2016 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 TIGRFAM TIGR00115 tig: trigger factor 11 427 1.7E-128 T 22-04-2016 IPR005215 Trigger factor GO:0015031 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 PIRSF PIRSF003095 1 449 3.8E-125 T 22-04-2016 IPR005215 Trigger factor GO:0015031 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 SUPERFAMILY SSF102735 1 129 5.62E-32 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 SUPERFAMILY SSF109998 260 442 4.51E-49 T 22-04-2016 IPR027304 Trigger factor/SurA domain JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 Hamap MF_00303 Trigger factor [tig]. 1 433 20.667 T 22-04-2016 IPR005215 Trigger factor GO:0015031 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 275 427 1.7E-35 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 168 249 9.5E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 Gene3D G3DSA:3.30.70.1050 1 119 3.7E-33 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 SUPERFAMILY SSF54534 103 253 3.34E-30 T 22-04-2016 JE55_RS00745 466d096f73b33768108c4b0b1443995b 449 PANTHER PTHR30560:SF3 5 445 4.1E-107 T 22-04-2016 JE55_RS10460 bc99382dba705a6cda6da51f2460a98c 295 PANTHER PTHR11102 59 273 7.1E-27 T 22-04-2016 JE55_RS10460 bc99382dba705a6cda6da51f2460a98c 295 SMART SM00671 181 216 2.9E-4 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS10460 bc99382dba705a6cda6da51f2460a98c 295 SMART SM00671 217 252 3.2E-7 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS10460 bc99382dba705a6cda6da51f2460a98c 295 SMART SM00671 144 180 25.0 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS10460 bc99382dba705a6cda6da51f2460a98c 295 Gene3D G3DSA:1.25.40.10 213 288 2.6E-16 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS10460 bc99382dba705a6cda6da51f2460a98c 295 Gene3D G3DSA:1.25.40.10 86 212 7.3E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS10460 bc99382dba705a6cda6da51f2460a98c 295 Pfam PF08238 Sel1 repeat 258 274 160.0 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS10460 bc99382dba705a6cda6da51f2460a98c 295 Pfam PF08238 Sel1 repeat 182 215 1.2E-6 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS10460 bc99382dba705a6cda6da51f2460a98c 295 Pfam PF08238 Sel1 repeat 99 129 160.0 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS10460 bc99382dba705a6cda6da51f2460a98c 295 Pfam PF08238 Sel1 repeat 217 250 1.1E-6 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS10460 bc99382dba705a6cda6da51f2460a98c 295 SUPERFAMILY SSF81901 142 275 5.93E-25 T 22-04-2016 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 SUPERFAMILY SSF54211 303 453 3.19E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 SUPERFAMILY SSF54211 255 269 3.19E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 SMART SM00382 86 244 4.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 Pfam PF13481 AAA domain 60 222 7.1E-17 T 22-04-2016 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 PANTHER PTHR32472 1 455 7.0E-209 T 22-04-2016 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 Gene3D G3DSA:3.40.50.300 55 275 1.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 PRINTS PR01874 DNA repair protein radA signature 322 345 2.9E-95 T 22-04-2016 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 PRINTS PR01874 DNA repair protein radA signature 78 106 2.9E-95 T 22-04-2016 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 PRINTS PR01874 DNA repair protein radA signature 119 136 2.9E-95 T 22-04-2016 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 PRINTS PR01874 DNA repair protein radA signature 10 34 2.9E-95 T 22-04-2016 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 PRINTS PR01874 DNA repair protein radA signature 213 241 2.9E-95 T 22-04-2016 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 PRINTS PR01874 DNA repair protein radA signature 174 198 2.9E-95 T 22-04-2016 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 PRINTS PR01874 DNA repair protein radA signature 248 274 2.9E-95 T 22-04-2016 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 363 452 1.0E-4 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 Gene3D G3DSA:3.30.230.10 284 453 1.5E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 6.2E-193 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 JE55_RS01300 ee7d23e664e1a45c5e61aeeeee37a72d 458 SUPERFAMILY SSF52540 65 288 9.33E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04260 aa2d599c1d89a4e758125a62220b3ccc 458 PANTHER PTHR11795 24 457 1.7E-148 T 22-04-2016 JE55_RS04260 aa2d599c1d89a4e758125a62220b3ccc 458 Pfam PF02653 Branched-chain amino acid transport system / permease component 165 440 7.1E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS04260 aa2d599c1d89a4e758125a62220b3ccc 458 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 164 454 4.0E-127 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type JE55_RS04260 aa2d599c1d89a4e758125a62220b3ccc 458 PANTHER PTHR11795:SF349 24 457 1.7E-148 T 22-04-2016 JE55_RS10590 9330e259a7a132d2053aef844067808b 571 PANTHER PTHR11819:SF13 45 556 2.0E-230 T 22-04-2016 JE55_RS10590 9330e259a7a132d2053aef844067808b 571 Pfam PF00474 Sodium:solute symporter family 76 490 1.1E-106 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS10590 9330e259a7a132d2053aef844067808b 571 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 76 490 2.3E-61 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS10590 9330e259a7a132d2053aef844067808b 571 PANTHER PTHR11819 45 556 2.0E-230 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS20840 bcade365c12d2a9f0728b1b1de47ffb3 359 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 189 291 7.1E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 JE55_RS20840 bcade365c12d2a9f0728b1b1de47ffb3 359 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 208 346 5.2E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS20840 bcade365c12d2a9f0728b1b1de47ffb3 359 Gene3D G3DSA:1.10.3720.10 185 355 5.6E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS20840 bcade365c12d2a9f0728b1b1de47ffb3 359 PANTHER PTHR30450 170 359 1.9E-111 T 22-04-2016 JE55_RS20840 bcade365c12d2a9f0728b1b1de47ffb3 359 SUPERFAMILY SSF161098 186 356 4.45E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS20840 bcade365c12d2a9f0728b1b1de47ffb3 359 PANTHER PTHR30450:SF5 170 359 1.9E-111 T 22-04-2016 JE55_RS18125 afe16692a5b3919c4dea352330738791 631 Gene3D G3DSA:1.20.1600.10 74 487 4.6E-88 T 22-04-2016 JE55_RS18125 afe16692a5b3919c4dea352330738791 631 PANTHER PTHR30203 1 508 9.9E-64 T 22-04-2016 JE55_RS18125 afe16692a5b3919c4dea352330738791 631 SUPERFAMILY SSF56954 78 488 5.49E-91 T 22-04-2016 JE55_RS18125 afe16692a5b3919c4dea352330738791 631 SUPERFAMILY SSF56954 14 41 5.49E-91 T 22-04-2016 JE55_RS18125 afe16692a5b3919c4dea352330738791 631 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 23 485 1.3E-101 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 JE55_RS18125 afe16692a5b3919c4dea352330738791 631 Pfam PF02321 Outer membrane efflux protein 305 485 3.2E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS18125 afe16692a5b3919c4dea352330738791 631 Pfam PF02321 Outer membrane efflux protein 87 277 6.7E-20 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS13375 883afb2861bcb2c9c31c7d84a3b92217 659 SUPERFAMILY SSF69618 9 260 3.01E-47 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13375 883afb2861bcb2c9c31c7d84a3b92217 659 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 329 655 5.7E-48 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX JE55_RS13375 883afb2861bcb2c9c31c7d84a3b92217 659 Gene3D G3DSA:3.40.50.10090 143 254 3.6E-18 T 22-04-2016 JE55_RS13375 883afb2861bcb2c9c31c7d84a3b92217 659 Gene3D G3DSA:3.40.50.10090 12 106 1.4E-13 T 22-04-2016 JE55_RS13375 883afb2861bcb2c9c31c7d84a3b92217 659 PANTHER PTHR38042 3 279 2.1E-34 T 22-04-2016 JE55_RS13375 883afb2861bcb2c9c31c7d84a3b92217 659 Pfam PF02602 Uroporphyrinogen-III synthase HemD 21 254 7.2E-36 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 JE55_RS13375 883afb2861bcb2c9c31c7d84a3b92217 659 PANTHER PTHR38042:SF1 3 279 2.1E-34 T 22-04-2016 JE55_RS00210 eb9d08d6049bee4980389cf0eaed898c 316 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 107 314 2.7E-59 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 JE55_RS00210 eb9d08d6049bee4980389cf0eaed898c 316 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 236 251 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 JE55_RS00210 eb9d08d6049bee4980389cf0eaed898c 316 PANTHER PTHR11579 103 311 2.2E-66 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 JE55_RS00210 eb9d08d6049bee4980389cf0eaed898c 316 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 111 313 4.9E-57 T 22-04-2016 JE55_RS00210 eb9d08d6049bee4980389cf0eaed898c 316 Gene3D G3DSA:3.40.50.150 118 314 7.6E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS00210 eb9d08d6049bee4980389cf0eaed898c 316 SUPERFAMILY SSF53335 108 313 5.78E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS00210 eb9d08d6049bee4980389cf0eaed898c 316 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 106 315 34.186 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 JE55_RS03220 827a22a78a7757ea97fcd7fbe893836d 131 SUPERFAMILY SSF50022 8 118 5.5E-19 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS03220 827a22a78a7757ea97fcd7fbe893836d 131 Gene3D G3DSA:2.102.10.10 8 109 4.9E-14 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS03220 827a22a78a7757ea97fcd7fbe893836d 131 PANTHER PTHR40261 24 109 1.9E-24 T 22-04-2016 JE55_RS03220 827a22a78a7757ea97fcd7fbe893836d 131 PANTHER PTHR40261:SF2 24 109 1.9E-24 T 22-04-2016 JE55_RS03220 827a22a78a7757ea97fcd7fbe893836d 131 Pfam PF00355 Rieske [2Fe-2S] domain 21 96 1.6E-7 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 JE55_RS12180 ec2242600f983613a792670d4134579d 388 SUPERFAMILY SSF56059 1 238 1.2E-84 T 22-04-2016 JE55_RS12180 ec2242600f983613a792670d4134579d 388 Gene3D G3DSA:3.30.1490.20 22 95 4.2E-35 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS12180 ec2242600f983613a792670d4134579d 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 JE55_RS12180 ec2242600f983613a792670d4134579d 388 Gene3D G3DSA:3.40.50.261 241 383 3.5E-64 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 JE55_RS12180 ec2242600f983613a792670d4134579d 388 Gene3D G3DSA:3.30.470.20 96 239 1.0E-59 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS12180 ec2242600f983613a792670d4134579d 388 PANTHER PTHR11815 1 388 2.7E-230 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 JE55_RS12180 ec2242600f983613a792670d4134579d 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.504 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 JE55_RS12180 ec2242600f983613a792670d4134579d 388 Pfam PF00549 CoA-ligase 262 382 1.1E-23 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 JE55_RS12180 ec2242600f983613a792670d4134579d 388 PIRSF PIRSF001554 1 388 4.9E-153 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 JE55_RS12180 ec2242600f983613a792670d4134579d 388 SUPERFAMILY SSF52210 239 384 8.9E-54 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 JE55_RS12180 ec2242600f983613a792670d4134579d 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 7.5E-162 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 JE55_RS12180 ec2242600f983613a792670d4134579d 388 Pfam PF08442 ATP-grasp domain 2 202 4.8E-82 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 JE55_RS00445 559b1ea298d0310053addf3d03131930 235 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 61 91 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00445 559b1ea298d0310053addf3d03131930 235 Gene3D G3DSA:1.10.1740.10 33 123 1.4E-20 T 22-04-2016 JE55_RS00445 559b1ea298d0310053addf3d03131930 235 Pfam PF08281 Sigma-70, region 4 143 193 8.6E-18 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00445 559b1ea298d0310053addf3d03131930 235 SUPERFAMILY SSF88946 34 117 8.63E-18 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00445 559b1ea298d0310053addf3d03131930 235 Gene3D G3DSA:1.10.10.10 134 198 9.4E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00445 559b1ea298d0310053addf3d03131930 235 PANTHER PTHR30173:SF6 13 197 1.3E-39 T 22-04-2016 JE55_RS00445 559b1ea298d0310053addf3d03131930 235 Pfam PF04542 Sigma-70 region 2 42 104 9.2E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00445 559b1ea298d0310053addf3d03131930 235 PANTHER PTHR30173 13 197 1.3E-39 T 22-04-2016 JE55_RS00445 559b1ea298d0310053addf3d03131930 235 SUPERFAMILY SSF88659 135 198 3.49E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS00445 559b1ea298d0310053addf3d03131930 235 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 36 194 1.3E-28 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS13315 685b0dd16896f140dda3b5b2844bc32c 224 PANTHER PTHR18901 2 211 5.5E-49 T 22-04-2016 JE55_RS13315 685b0dd16896f140dda3b5b2844bc32c 224 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 184 5.8E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS13315 685b0dd16896f140dda3b5b2844bc32c 224 SUPERFAMILY SSF56784 1 212 7.72E-47 T 22-04-2016 IPR023214 HAD-like domain JE55_RS13315 685b0dd16896f140dda3b5b2844bc32c 224 Gene3D G3DSA:3.40.50.1000 88 211 8.4E-40 T 22-04-2016 IPR023214 HAD-like domain JE55_RS13315 685b0dd16896f140dda3b5b2844bc32c 224 Gene3D G3DSA:3.40.50.1000 1 16 8.4E-40 T 22-04-2016 IPR023214 HAD-like domain JE55_RS13315 685b0dd16896f140dda3b5b2844bc32c 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 5.6E-25 T 22-04-2016 IPR023214 HAD-like domain JE55_RS13315 685b0dd16896f140dda3b5b2844bc32c 224 PANTHER PTHR18901:SF34 2 211 5.5E-49 T 22-04-2016 JE55_RS13315 685b0dd16896f140dda3b5b2844bc32c 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS13315 685b0dd16896f140dda3b5b2844bc32c 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS13315 685b0dd16896f140dda3b5b2844bc32c 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS13315 685b0dd16896f140dda3b5b2844bc32c 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 1.0E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS14065 b035c1834efa3de3e14bf95584985715 75 Gene3D G3DSA:2.30.31.10 19 66 6.0E-11 T 22-04-2016 IPR009044 ssDNA-binding transcriptional regulator GO:0003677|GO:0006355 JE55_RS14065 b035c1834efa3de3e14bf95584985715 75 SUPERFAMILY SSF54447 16 67 3.77E-13 T 22-04-2016 IPR009044 ssDNA-binding transcriptional regulator GO:0003677|GO:0006355 JE55_RS14065 b035c1834efa3de3e14bf95584985715 75 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 18 65 4.3E-10 T 22-04-2016 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0003713|GO:0006355 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 Pfam PF01218 Coproporphyrinogen III oxidase 11 306 9.6E-121 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 Gene3D G3DSA:3.40.1500.10 3 307 5.1E-124 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 PRINTS PR00073 Coprogen oxidase signature 239 266 4.4E-64 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 PRINTS PR00073 Coprogen oxidase signature 267 293 4.4E-64 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 PRINTS PR00073 Coprogen oxidase signature 130 152 4.4E-64 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 PRINTS PR00073 Coprogen oxidase signature 95 119 4.4E-64 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 PRINTS PR00073 Coprogen oxidase signature 32 48 4.4E-64 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 PRINTS PR00073 Coprogen oxidase signature 167 196 4.4E-64 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 PIRSF PIRSF000166 1 307 1.3E-115 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 5 282 52.812 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 PANTHER PTHR10755 10 307 1.4E-157 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 171 195 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14140 2f0577d01bf218e8e87921ecd2bf7894 307 SUPERFAMILY SSF102886 3 306 6.67E-129 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS14635 0e150829dafea3063eb46d0b5895213c 413 Gene3D G3DSA:2.30.42.10 361 412 2.5E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS14635 0e150829dafea3063eb46d0b5895213c 413 Pfam PF13650 Aspartyl protease 69 176 3.4E-11 T 22-04-2016 JE55_RS14635 0e150829dafea3063eb46d0b5895213c 413 SUPERFAMILY SSF50630 64 182 4.23E-9 T 22-04-2016 IPR021109 Aspartic peptidase domain JE55_RS14635 0e150829dafea3063eb46d0b5895213c 413 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 80 91 - T 22-04-2016 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 JE55_RS14635 0e150829dafea3063eb46d0b5895213c 413 SUPERFAMILY SSF50156 361 411 1.46E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 Gene3D G3DSA:3.30.420.40 165 191 3.1E-33 T 22-04-2016 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 Gene3D G3DSA:3.30.420.40 268 322 3.1E-33 T 22-04-2016 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 Gene3D G3DSA:3.90.640.10 192 264 1.2E-30 T 22-04-2016 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 PANTHER PTHR19375:SF117 9 332 1.3E-178 T 22-04-2016 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 2.52E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 2.52E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 2.52E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 2.52E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 2.52E-63 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 SUPERFAMILY SSF53067 9 153 7.92E-38 T 22-04-2016 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 SUPERFAMILY SSF53067 154 339 8.78E-49 T 22-04-2016 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 Gene3D G3DSA:3.30.420.40 10 164 2.6E-46 T 22-04-2016 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 PANTHER PTHR19375 9 332 1.3E-178 T 22-04-2016 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 Pfam PF06723 MreB/Mbl protein 10 340 8.3E-150 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 JE55_RS09310 43d4fcefa8a92d787bb134dee0b018cc 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 1.7E-155 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 JE55_RS03110 e7e7b6238fd6bd56c8061228f3658cb8 286 Pfam PF02565 Recombination protein O C terminal 134 277 1.6E-19 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 JE55_RS03110 e7e7b6238fd6bd56c8061228f3658cb8 286 Pfam PF11967 Recombination protein O N terminal 55 128 5.9E-24 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal JE55_RS03110 e7e7b6238fd6bd56c8061228f3658cb8 286 SUPERFAMILY SSF57863 136 244 1.57E-8 T 22-04-2016 JE55_RS03110 e7e7b6238fd6bd56c8061228f3658cb8 286 SUPERFAMILY SSF50249 53 127 5.48E-16 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03110 e7e7b6238fd6bd56c8061228f3658cb8 286 Hamap MF_00201 DNA repair protein RecO [recO]. 52 283 21.59 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 JE55_RS03110 e7e7b6238fd6bd56c8061228f3658cb8 286 TIGRFAM TIGR00613 reco: DNA repair protein RecO 57 200 5.6E-26 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 JE55_RS03110 e7e7b6238fd6bd56c8061228f3658cb8 286 PANTHER PTHR33991 52 283 3.5E-45 T 22-04-2016 JE55_RS03110 e7e7b6238fd6bd56c8061228f3658cb8 286 Gene3D G3DSA:2.40.50.140 52 127 8.4E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS01700 b2e55bf497962a4cb325ff1a65debc33 266 SUPERFAMILY SSF56300 27 242 1.29E-29 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS01700 b2e55bf497962a4cb325ff1a65debc33 266 PANTHER PTHR34990 12 259 5.2E-72 T 22-04-2016 JE55_RS01700 b2e55bf497962a4cb325ff1a65debc33 266 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 266 97.394 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 JE55_RS01700 b2e55bf497962a4cb325ff1a65debc33 266 Gene3D G3DSA:3.60.21.10 199 241 4.2E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS01700 b2e55bf497962a4cb325ff1a65debc33 266 Gene3D G3DSA:3.60.21.10 27 151 4.2E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like JE55_RS01700 b2e55bf497962a4cb325ff1a65debc33 266 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 28 245 1.2E-67 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 JE55_RS01700 b2e55bf497962a4cb325ff1a65debc33 266 Pfam PF00149 Calcineurin-like phosphoesterase 26 225 2.5E-8 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 JE55_RS01700 b2e55bf497962a4cb325ff1a65debc33 266 PANTHER PTHR34990:SF1 12 259 5.2E-72 T 22-04-2016 JE55_RS13290 de55f0b628f6cf4940bb667604e834ed 362 Hamap MF_02040 Iron-sulfur cluster carrier protein. 92 340 37.76 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein JE55_RS13290 de55f0b628f6cf4940bb667604e834ed 362 SUPERFAMILY SSF52540 89 324 2.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13290 de55f0b628f6cf4940bb667604e834ed 362 Pfam PF01883 Domain of unknown function DUF59 8 78 2.1E-17 T 22-04-2016 IPR002744 Domain of unknown function DUF59 JE55_RS13290 de55f0b628f6cf4940bb667604e834ed 362 PANTHER PTHR23264 1 355 2.8E-163 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein JE55_RS13290 de55f0b628f6cf4940bb667604e834ed 362 Gene3D G3DSA:3.40.50.300 94 337 9.1E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13290 de55f0b628f6cf4940bb667604e834ed 362 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 96 339 6.4E-102 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein JE55_RS13290 de55f0b628f6cf4940bb667604e834ed 362 SUPERFAMILY SSF117916 5 85 1.01E-11 T 22-04-2016 JE55_RS13290 de55f0b628f6cf4940bb667604e834ed 362 PANTHER PTHR23264:SF19 1 355 2.8E-163 T 22-04-2016 JE55_RS13290 de55f0b628f6cf4940bb667604e834ed 362 ProSitePatterns PS01215 Mrp family signature. 203 219 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 JE55_RS12535 e0ae609bff9110c445aa1faa9a3dc89e 416 PIRSF PIRSF038800 1 407 3.9E-144 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 JE55_RS12535 e0ae609bff9110c445aa1faa9a3dc89e 416 Gene3D G3DSA:3.90.1150.10 256 416 6.9E-65 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS12535 e0ae609bff9110c445aa1faa9a3dc89e 416 PANTHER PTHR14084 3 409 2.3E-141 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 JE55_RS12535 e0ae609bff9110c445aa1faa9a3dc89e 416 TIGRFAM TIGR01814 kynureninase: kynureninase 8 400 5.5E-102 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 JE55_RS12535 e0ae609bff9110c445aa1faa9a3dc89e 416 Hamap MF_01970 Kynureninase [kynU]. 1 399 34.316 T 22-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 JE55_RS12535 e0ae609bff9110c445aa1faa9a3dc89e 416 Pfam PF00266 Aminotransferase class-V 154 363 6.7E-14 T 22-04-2016 IPR000192 Aminotransferase class V domain JE55_RS12535 e0ae609bff9110c445aa1faa9a3dc89e 416 Gene3D G3DSA:3.40.640.10 41 247 6.7E-18 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS12535 e0ae609bff9110c445aa1faa9a3dc89e 416 SUPERFAMILY SSF53383 3 400 1.8E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS17230 45acadc4596c65ff76918f2f4e54016a 394 SUPERFAMILY SSF103473 9 382 2.22E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS17230 45acadc4596c65ff76918f2f4e54016a 394 PANTHER PTHR23523 11 391 1.4E-88 T 22-04-2016 JE55_RS17230 45acadc4596c65ff76918f2f4e54016a 394 Gene3D G3DSA:1.20.1250.20 204 382 1.1E-16 T 22-04-2016 JE55_RS17230 45acadc4596c65ff76918f2f4e54016a 394 Pfam PF07690 Major Facilitator Superfamily 26 342 2.4E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS17230 45acadc4596c65ff76918f2f4e54016a 394 PANTHER PTHR23523:SF2 11 391 1.4E-88 T 22-04-2016 JE55_RS17230 45acadc4596c65ff76918f2f4e54016a 394 Gene3D G3DSA:1.20.1250.20 11 196 2.6E-14 T 22-04-2016 JE55_RS14785 015891f420967e972936c6523d966fba 1114 Gene3D G3DSA:3.40.50.300 635 732 7.2E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14785 015891f420967e972936c6523d966fba 1114 Gene3D G3DSA:3.40.50.300 342 433 7.2E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14785 015891f420967e972936c6523d966fba 1114 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1061 2.2E-213 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 JE55_RS14785 015891f420967e972936c6523d966fba 1114 Gene3D G3DSA:1.10.10.160 86 193 2.1E-25 T 22-04-2016 IPR013986 DExx box DNA helicase domain JE55_RS14785 015891f420967e972936c6523d966fba 1114 SUPERFAMILY SSF52540 1 336 1.17E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14785 015891f420967e972936c6523d966fba 1114 PANTHER PTHR30591 1 1084 6.5E-157 T 22-04-2016 JE55_RS14785 015891f420967e972936c6523d966fba 1114 SUPERFAMILY SSF52540 345 783 1.27E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14785 015891f420967e972936c6523d966fba 1114 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 779 1.3E-216 T 22-04-2016 JE55_RS14785 015891f420967e972936c6523d966fba 1114 PIRSF PIRSF000980 1 1114 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 JE55_RS14785 015891f420967e972936c6523d966fba 1114 SUPERFAMILY SSF52980 959 1110 1.82E-62 T 22-04-2016 IPR011335 Restriction endonuclease type II-like JE55_RS14785 015891f420967e972936c6523d966fba 1114 SUPERFAMILY SSF52980 798 932 1.82E-62 T 22-04-2016 IPR011335 Restriction endonuclease type II-like JE55_RS14785 015891f420967e972936c6523d966fba 1114 PANTHER PTHR30591:SF1 1 1084 6.5E-157 T 22-04-2016 JE55_RS14785 015891f420967e972936c6523d966fba 1114 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1112 11.411 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 JE55_RS04250 06f7787f7b93d12f5e37128f16d15a21 442 Gene3D G3DSA:3.40.640.10 64 342 3.3E-79 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS04250 06f7787f7b93d12f5e37128f16d15a21 442 Pfam PF00202 Aminotransferase class-III 25 438 4.4E-109 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS04250 06f7787f7b93d12f5e37128f16d15a21 442 PANTHER PTHR11986:SF80 14 442 1.2E-239 T 22-04-2016 JE55_RS04250 06f7787f7b93d12f5e37128f16d15a21 442 PANTHER PTHR11986 14 442 1.2E-239 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 JE55_RS04250 06f7787f7b93d12f5e37128f16d15a21 442 Gene3D G3DSA:3.90.1150.10 344 441 1.9E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS04250 06f7787f7b93d12f5e37128f16d15a21 442 Gene3D G3DSA:3.90.1150.10 10 63 1.9E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS04250 06f7787f7b93d12f5e37128f16d15a21 442 SUPERFAMILY SSF53383 9 440 1.31E-119 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 Pfam PF01225 Mur ligase family, catalytic domain 7 105 3.1E-28 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 Gene3D G3DSA:3.40.1190.10 94 311 2.1E-83 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 SUPERFAMILY SSF51984 6 92 4.97E-30 T 22-04-2016 JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 Pfam PF08245 Mur ligase middle domain 110 290 1.1E-27 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 463 43.279 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 Gene3D G3DSA:3.40.50.720 6 92 5.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 Gene3D G3DSA:3.90.190.20 312 461 4.4E-55 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 PANTHER PTHR23135 1 451 7.1E-200 T 22-04-2016 JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 400 1.0E-19 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 SUPERFAMILY SSF53623 91 308 3.66E-71 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 453 9.5E-168 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 PANTHER PTHR23135:SF5 1 451 7.1E-200 T 22-04-2016 JE55_RS06295 769bbb0f627fda03fe1f220009109cd4 465 SUPERFAMILY SSF53244 309 457 5.13E-46 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS04345 5e421354d1ba1e792b06c2b8401511d1 378 Pfam PF13692 Glycosyl transferases group 1 196 336 4.6E-24 T 22-04-2016 JE55_RS04345 5e421354d1ba1e792b06c2b8401511d1 378 PANTHER PTHR12526:SF373 19 375 1.3E-44 T 22-04-2016 JE55_RS04345 5e421354d1ba1e792b06c2b8401511d1 378 PANTHER PTHR12526 19 375 1.3E-44 T 22-04-2016 JE55_RS04345 5e421354d1ba1e792b06c2b8401511d1 378 Gene3D G3DSA:3.40.50.2000 190 351 4.7E-23 T 22-04-2016 JE55_RS04345 5e421354d1ba1e792b06c2b8401511d1 378 SUPERFAMILY SSF53756 8 370 9.2E-63 T 22-04-2016 JE55_RS04345 5e421354d1ba1e792b06c2b8401511d1 378 Pfam PF13477 Glycosyl transferase 4-like 8 151 4.4E-19 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JE55_RS12465 4b423bb74b7aec4acbfe9ea063e3eaab 433 SUPERFAMILY SSF56784 179 223 4.58E-19 T 22-04-2016 IPR023214 HAD-like domain JE55_RS12465 4b423bb74b7aec4acbfe9ea063e3eaab 433 SUPERFAMILY SSF56784 74 112 4.58E-19 T 22-04-2016 IPR023214 HAD-like domain JE55_RS12465 4b423bb74b7aec4acbfe9ea063e3eaab 433 SUPERFAMILY SSF56784 257 370 4.58E-19 T 22-04-2016 IPR023214 HAD-like domain JE55_RS12465 4b423bb74b7aec4acbfe9ea063e3eaab 433 Pfam PF12710 haloacid dehalogenase-like hydrolase 250 366 4.5E-8 T 22-04-2016 JE55_RS12465 4b423bb74b7aec4acbfe9ea063e3eaab 433 Gene3D G3DSA:3.40.50.1000 77 93 3.2E-9 T 22-04-2016 IPR023214 HAD-like domain JE55_RS12465 4b423bb74b7aec4acbfe9ea063e3eaab 433 Gene3D G3DSA:3.40.50.1000 257 375 3.2E-9 T 22-04-2016 IPR023214 HAD-like domain JE55_RS04155 2e9ed5c7634611f5c642cc38f0b33f9c 327 PANTHER PTHR10314:SF124 1 327 2.5E-157 T 22-04-2016 JE55_RS04155 2e9ed5c7634611f5c642cc38f0b33f9c 327 PANTHER PTHR10314 1 327 2.5E-157 T 22-04-2016 JE55_RS04155 2e9ed5c7634611f5c642cc38f0b33f9c 327 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 313 1.1E-72 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS04155 2e9ed5c7634611f5c642cc38f0b33f9c 327 SUPERFAMILY SSF53686 13 322 5.63E-92 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS04155 2e9ed5c7634611f5c642cc38f0b33f9c 327 Gene3D G3DSA:3.40.50.1100 80 326 2.3E-68 T 22-04-2016 JE55_RS03290 62e5a69061256156b4d4b1645f9d36dc 107 Pfam PF00037 4Fe-4S binding domain 35 56 2.2E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS03290 62e5a69061256156b4d4b1645f9d36dc 107 Gene3D G3DSA:3.30.70.20 4 103 2.3E-22 T 22-04-2016 JE55_RS03290 62e5a69061256156b4d4b1645f9d36dc 107 Pfam PF12800 4Fe-4S binding domain 7 23 0.7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS03290 62e5a69061256156b4d4b1645f9d36dc 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS03290 62e5a69061256156b4d4b1645f9d36dc 107 PANTHER PTHR11938:SF101 1 82 3.1E-39 T 22-04-2016 JE55_RS03290 62e5a69061256156b4d4b1645f9d36dc 107 Pfam PF11953 Domain of unknown function (DUF3470) 66 107 2.1E-20 T 22-04-2016 IPR022569 Ferredoxin, C-terminal JE55_RS03290 62e5a69061256156b4d4b1645f9d36dc 107 PANTHER PTHR11938 1 82 3.1E-39 T 22-04-2016 JE55_RS03290 62e5a69061256156b4d4b1645f9d36dc 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.8E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 JE55_RS03290 62e5a69061256156b4d4b1645f9d36dc 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.8E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 JE55_RS03290 62e5a69061256156b4d4b1645f9d36dc 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.8E-14 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 JE55_RS03290 62e5a69061256156b4d4b1645f9d36dc 107 SUPERFAMILY SSF54862 3 103 6.29E-26 T 22-04-2016 JE55_RS04195 22199ff7a853ff2cce777c8ef7820b8b 343 Gene3D G3DSA:3.30.1600.10 203 257 3.6E-24 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain JE55_RS04195 22199ff7a853ff2cce777c8ef7820b8b 343 Gene3D G3DSA:3.30.1600.10 105 150 3.6E-24 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain JE55_RS04195 22199ff7a853ff2cce777c8ef7820b8b 343 Pfam PF02146 Sir2 family 94 257 2.6E-18 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 JE55_RS04195 22199ff7a853ff2cce777c8ef7820b8b 343 PANTHER PTHR11085 4 314 1.3E-64 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 JE55_RS04195 22199ff7a853ff2cce777c8ef7820b8b 343 Gene3D G3DSA:3.40.50.1220 282 325 3.4E-13 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS04195 22199ff7a853ff2cce777c8ef7820b8b 343 Gene3D G3DSA:3.40.50.1220 73 104 3.4E-13 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS04195 22199ff7a853ff2cce777c8ef7820b8b 343 Gene3D G3DSA:3.40.50.1220 162 202 3.4E-13 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS04195 22199ff7a853ff2cce777c8ef7820b8b 343 PANTHER PTHR11085:SF10 4 314 1.3E-64 T 22-04-2016 JE55_RS04195 22199ff7a853ff2cce777c8ef7820b8b 343 SUPERFAMILY SSF52467 65 340 1.73E-64 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 Gene3D G3DSA:1.10.287.90 42 130 3.6E-28 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 SUPERFAMILY SSF46626 276 380 8.73E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 297 367 4.6E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 210 258 - T 22-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 139 264 3.2E-33 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 PRINTS PR01021 OMPA domain signature 429 451 3.9E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 PRINTS PR01021 OMPA domain signature 459 474 3.9E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 PRINTS PR01021 OMPA domain signature 474 490 3.9E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 Gene3D G3DSA:2.60.40.420 131 305 6.9E-54 T 22-04-2016 IPR008972 Cupredoxin JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 SUPERFAMILY SSF103088 422 521 1.31E-19 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 SUPERFAMILY SSF81464 40 133 5.23E-28 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 Gene3D G3DSA:3.30.1330.60 413 521 1.5E-21 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 52 274 5.4E-57 T 22-04-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 Gene3D G3DSA:1.10.760.10 306 394 9.1E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 Pfam PF00691 OmpA family 428 501 7.3E-15 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 PANTHER PTHR22888 45 318 5.1E-95 T 22-04-2016 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 PANTHER PTHR22888:SF2 45 318 5.1E-95 T 22-04-2016 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 44 124 8.3E-17 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 SUPERFAMILY SSF49503 187 321 1.89E-48 T 22-04-2016 IPR008972 Cupredoxin JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 SUPERFAMILY SSF49503 131 158 1.89E-48 T 22-04-2016 IPR008972 Cupredoxin JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 PRINTS PR01166 Cytochrome c oxidase subunit II signature 247 264 1.3E-35 T 22-04-2016 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 PRINTS PR01166 Cytochrome c oxidase subunit II signature 113 133 1.3E-35 T 22-04-2016 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 PRINTS PR01166 Cytochrome c oxidase subunit II signature 185 206 1.3E-35 T 22-04-2016 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 PRINTS PR01166 Cytochrome c oxidase subunit II signature 209 229 1.3E-35 T 22-04-2016 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 PRINTS PR01166 Cytochrome c oxidase subunit II signature 135 154 1.3E-35 T 22-04-2016 JE55_RS10740 73f9dada2df96a6d4ba1884dd937aac2 525 PRINTS PR01166 Cytochrome c oxidase subunit II signature 101 113 1.3E-35 T 22-04-2016 JE55_RS03605 c07f4ec2d09d05b38f2cf59a96c564f6 434 PIRSF PIRSF000505 6 434 9.0E-142 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS03605 c07f4ec2d09d05b38f2cf59a96c564f6 434 PANTHER PTHR21090:SF21 1 428 4.8E-184 T 22-04-2016 JE55_RS03605 c07f4ec2d09d05b38f2cf59a96c564f6 434 PANTHER PTHR21090 1 428 4.8E-184 T 22-04-2016 JE55_RS03605 c07f4ec2d09d05b38f2cf59a96c564f6 434 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 434 34.352 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS03605 c07f4ec2d09d05b38f2cf59a96c564f6 434 Gene3D G3DSA:3.65.10.10 240 427 1.1E-70 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS03605 c07f4ec2d09d05b38f2cf59a96c564f6 434 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 431 6.5E-137 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS03605 c07f4ec2d09d05b38f2cf59a96c564f6 434 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 11 427 6.6E-129 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS03605 c07f4ec2d09d05b38f2cf59a96c564f6 434 SUPERFAMILY SSF55205 1 431 5.56E-126 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JE55_RS03605 c07f4ec2d09d05b38f2cf59a96c564f6 434 Gene3D G3DSA:3.65.10.10 22 239 2.1E-70 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS03605 c07f4ec2d09d05b38f2cf59a96c564f6 434 ProSitePatterns PS00104 EPSP synthase signature 1. 87 101 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS03605 c07f4ec2d09d05b38f2cf59a96c564f6 434 ProSitePatterns PS00885 EPSP synthase signature 2. 345 363 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS08240 f646f3390cd1a889d2d57c97183837a0 462 PANTHER PTHR30182:SF1 1 460 1.2E-230 T 22-04-2016 JE55_RS08240 f646f3390cd1a889d2d57c97183837a0 462 SUPERFAMILY SSF143548 17 156 2.14E-44 T 22-04-2016 IPR029009 Allosteric substrate binding domain JE55_RS08240 f646f3390cd1a889d2d57c97183837a0 462 Pfam PF03315 Serine dehydratase beta chain 4 155 4.4E-56 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 JE55_RS08240 f646f3390cd1a889d2d57c97183837a0 462 Pfam PF03313 Serine dehydratase alpha chain 187 456 5.3E-106 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit JE55_RS08240 f646f3390cd1a889d2d57c97183837a0 462 PANTHER PTHR30182 1 460 1.2E-230 T 22-04-2016 JE55_RS08240 f646f3390cd1a889d2d57c97183837a0 462 Gene3D G3DSA:3.30.1330.90 11 156 5.4E-53 T 22-04-2016 IPR029009 Allosteric substrate binding domain JE55_RS08240 f646f3390cd1a889d2d57c97183837a0 462 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 459 1.4E-209 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 JE55_RS13725 dd533eaa2076e46d47a1c6776a3af28c 152 PANTHER PTHR11803:SF2 1 151 2.6E-44 T 22-04-2016 JE55_RS13725 dd533eaa2076e46d47a1c6776a3af28c 152 PANTHER PTHR11803 1 151 2.6E-44 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family JE55_RS13725 dd533eaa2076e46d47a1c6776a3af28c 152 SUPERFAMILY SSF55298 1 151 1.13E-50 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS13725 dd533eaa2076e46d47a1c6776a3af28c 152 Gene3D G3DSA:3.30.1330.40 2 151 2.0E-60 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS13725 dd533eaa2076e46d47a1c6776a3af28c 152 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 8 151 8.5E-26 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 Pfam PF12848 ABC transporter 224 309 6.3E-20 T 22-04-2016 IPR032781 ABC-transporter extension domain JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 PANTHER PTHR19211:SF38 2 526 0.0 T 22-04-2016 JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 Pfam PF00005 ABC transporter 335 466 2.8E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 Pfam PF00005 ABC transporter 18 184 5.1E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 SUPERFAMILY SSF52540 125 238 1.27E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 SUPERFAMILY SSF52540 2 92 1.27E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 Gene3D G3DSA:3.40.50.300 5 280 1.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 PANTHER PTHR19211 2 526 0.0 T 22-04-2016 JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 Gene3D G3DSA:3.40.50.300 319 528 4.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 SUPERFAMILY SSF52540 296 523 1.98E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 SMART SM00382 343 511 1.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS18225 5689bf883f60a66d0dbbce1d252f3dd7 530 SMART SM00382 26 226 3.9E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS27020 e62eddf717724117c2aec87e3317c6ea 280 SUPERFAMILY SSF52540 189 277 2.45E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS27020 e62eddf717724117c2aec87e3317c6ea 280 PANTHER PTHR24220 194 280 4.2E-31 T 22-04-2016 JE55_RS27020 e62eddf717724117c2aec87e3317c6ea 280 Gene3D G3DSA:3.40.50.300 184 279 9.3E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS27020 e62eddf717724117c2aec87e3317c6ea 280 Pfam PF00005 ABC transporter 217 271 4.2E-12 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS27020 e62eddf717724117c2aec87e3317c6ea 280 PANTHER PTHR24220:SF493 194 280 4.2E-31 T 22-04-2016 JE55_RS00285 bf6a86d49012c222b77c689be4a1aabd 132 Gene3D G3DSA:1.20.1290.10 7 128 5.6E-45 T 22-04-2016 IPR029032 AhpD-like JE55_RS00285 bf6a86d49012c222b77c689be4a1aabd 132 PANTHER PTHR33570 6 132 2.5E-39 T 22-04-2016 JE55_RS00285 bf6a86d49012c222b77c689be4a1aabd 132 PANTHER PTHR33570:SF4 6 132 2.5E-39 T 22-04-2016 JE55_RS00285 bf6a86d49012c222b77c689be4a1aabd 132 SUPERFAMILY SSF69118 5 128 2.65E-35 T 22-04-2016 IPR029032 AhpD-like JE55_RS00285 bf6a86d49012c222b77c689be4a1aabd 132 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 122 4.5E-23 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 SUPERFAMILY SSF81271 2 61 1.24E-14 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 1.7E-43 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 4.2E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 4.2E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 4.2E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 4.2E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 4.2E-53 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 Pfam PF02824 TGS domain 4 61 3.9E-7 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 Gene3D G3DSA:3.30.930.10 241 529 1.8E-125 T 22-04-2016 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 Gene3D G3DSA:3.30.54.20 131 186 7.0E-24 T 22-04-2016 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 SUPERFAMILY SSF52954 529 632 3.47E-29 T 22-04-2016 IPR004154 Anticodon-binding JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 630 7.9E-225 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 34.797 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 Gene3D G3DSA:3.30.980.10 187 223 8.3E-43 T 22-04-2016 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 Gene3D G3DSA:3.30.980.10 66 129 8.3E-43 T 22-04-2016 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 170 218 2.8E-15 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 Gene3D G3DSA:3.10.20.30 1 64 1.5E-21 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 Gene3D G3DSA:3.40.50.800 530 633 1.6E-32 T 22-04-2016 IPR004154 Anticodon-binding JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 Pfam PF03129 Anticodon binding domain 541 629 1.1E-18 T 22-04-2016 IPR004154 Anticodon-binding JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 SUPERFAMILY SSF55186 64 240 8.24E-70 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 PANTHER PTHR11451:SF31 1 632 0.0 T 22-04-2016 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 SMART SM00863 169 218 2.1E-24 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 PANTHER PTHR11451 1 632 0.0 T 22-04-2016 JE55_RS16185 1024b87aa00927bb63bdc9b039fbfd69 635 SUPERFAMILY SSF55681 242 525 2.87E-104 T 22-04-2016 JE55_RS10610 55243d2a95316204f6213963e92afe59 178 Gene3D G3DSA:3.40.30.10 21 175 1.4E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10610 55243d2a95316204f6213963e92afe59 178 PANTHER PTHR10681:SF107 52 172 4.8E-24 T 22-04-2016 JE55_RS10610 55243d2a95316204f6213963e92afe59 178 SUPERFAMILY SSF52833 39 175 4.55E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10610 55243d2a95316204f6213963e92afe59 178 Pfam PF08534 Redoxin 39 168 1.1E-22 T 22-04-2016 IPR013740 Redoxin GO:0016491 JE55_RS10610 55243d2a95316204f6213963e92afe59 178 PANTHER PTHR10681 52 172 4.8E-24 T 22-04-2016 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 TIGRFAM TIGR00165 S18: ribosomal protein bS18 20 87 3.2E-33 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 Pfam PF01084 Ribosomal protein S18 34 83 1.1E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 PANTHER PTHR13479 19 91 2.4E-23 T 22-04-2016 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 PRINTS PR00974 Ribosomal protein S18 family signature 75 85 3.2E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 PRINTS PR00974 Ribosomal protein S18 family signature 43 53 3.2E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 PRINTS PR00974 Ribosomal protein S18 family signature 53 60 3.2E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 PRINTS PR00974 Ribosomal protein S18 family signature 61 75 3.2E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 SUPERFAMILY SSF46911 14 89 8.24E-28 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 17 88 20.152 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 ProSitePatterns PS00057 Ribosomal protein S18 signature. 36 59 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 36 88 1.0E-24 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00425 fa34f23e01bd489bd4daf47c4166687d 91 Gene3D G3DSA:4.10.640.10 23 89 1.4E-30 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS05755 4b4c175313a980a181d329adcef2dc6b 138 PANTHER PTHR40255 1 138 8.0E-36 T 22-04-2016 JE55_RS05755 4b4c175313a980a181d329adcef2dc6b 138 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 138 9.4E-41 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 JE55_RS05755 4b4c175313a980a181d329adcef2dc6b 138 PIRSF PIRSF004638 1 138 5.2E-47 T 22-04-2016 IPR005265 Uncharacterised protein family UPF0093 JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 Pfam PF00717 Peptidase S24-like 128 194 4.5E-17 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 SUPERFAMILY SSF46785 3 70 1.19E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 PANTHER PTHR33516:SF2 1 215 6.1E-83 T 22-04-2016 JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 Gene3D G3DSA:1.10.10.10 1 69 7.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 SUPERFAMILY SSF51306 89 211 1.45E-34 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 Hamap MF_00015 LexA repressor [lexA]. 3 213 30.841 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 136 147 1.6E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 135 1.6E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 164 176 1.6E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 Pfam PF01726 LexA DNA binding domain 1 65 3.0E-27 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 PANTHER PTHR33516 1 215 6.1E-83 T 22-04-2016 JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 TIGRFAM TIGR00498 lexA: repressor LexA 1 211 2.0E-65 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 JE55_RS16750 8b80a68edafac884e34681ada275a9e9 215 Gene3D G3DSA:2.10.109.10 90 211 4.7E-40 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain JE55_RS00120 a7167882734cb63b8d99c68bf3023844 437 SMART SM00244 90 263 8.0E-18 T 22-04-2016 IPR001107 Band 7 domain JE55_RS00120 a7167882734cb63b8d99c68bf3023844 437 Pfam PF01145 SPFH domain / Band 7 family 94 279 1.3E-26 T 22-04-2016 IPR001107 Band 7 domain JE55_RS00120 a7167882734cb63b8d99c68bf3023844 437 SUPERFAMILY SSF117892 150 268 9.94E-21 T 22-04-2016 IPR001107 Band 7 domain JE55_RS00120 a7167882734cb63b8d99c68bf3023844 437 TIGRFAM TIGR01933 hflK: HflK protein 92 365 1.5E-80 T 22-04-2016 IPR010201 HflK GO:0016021 JE55_RS00120 a7167882734cb63b8d99c68bf3023844 437 PANTHER PTHR10264 8 372 2.5E-97 T 22-04-2016 IPR001972 Stomatin family GO:0016020 JE55_RS00120 a7167882734cb63b8d99c68bf3023844 437 PANTHER PTHR10264:SF51 8 372 2.5E-97 T 22-04-2016 IPR010201 HflK GO:0016021 JE55_RS00120 a7167882734cb63b8d99c68bf3023844 437 Pfam PF12221 Bacterial membrane protein N terminal 6 57 3.8E-12 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal JE55_RS11165 d6007fc091ccf6c939ec9af4e94ab9d8 119 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 97 8.7E-24 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 JE55_RS11165 d6007fc091ccf6c939ec9af4e94ab9d8 119 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 103 8.8E-28 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 JE55_RS11165 d6007fc091ccf6c939ec9af4e94ab9d8 119 PANTHER PTHR33231 1 103 1.8E-26 T 22-04-2016 JE55_RS11165 d6007fc091ccf6c939ec9af4e94ab9d8 119 SUPERFAMILY SSF69754 2 113 3.79E-32 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 JE55_RS11165 d6007fc091ccf6c939ec9af4e94ab9d8 119 Gene3D G3DSA:3.30.160.100 1 100 2.9E-32 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 Hamap MF_00006 Argininosuccinate lyase [argH]. 10 465 42.808 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PANTHER PTHR11444:SF3 12 467 3.3E-217 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 TIGRFAM TIGR00838 argH: argininosuccinate lyase 12 467 1.3E-181 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 Gene3D G3DSA:1.20.200.10 115 381 2.4E-110 T 22-04-2016 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 SUPERFAMILY SSF48557 12 467 1.57E-148 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PRINTS PR00149 Fumarate lyase superfamily signature 155 173 3.5E-30 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PRINTS PR00149 Fumarate lyase superfamily signature 110 128 3.5E-30 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PRINTS PR00149 Fumarate lyase superfamily signature 239 266 3.5E-30 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 3.5E-30 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PANTHER PTHR11444 12 467 3.3E-217 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 Pfam PF14698 Argininosuccinate lyase C-terminal 371 443 4.4E-24 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 Gene3D G3DSA:1.10.40.30 382 443 4.0E-29 T 22-04-2016 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PRINTS PR00145 Argininosuccinate lyase family signature 318 337 2.1E-68 T 22-04-2016 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PRINTS PR00145 Argininosuccinate lyase family signature 239 263 2.1E-68 T 22-04-2016 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PRINTS PR00145 Argininosuccinate lyase family signature 150 170 2.1E-68 T 22-04-2016 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PRINTS PR00145 Argininosuccinate lyase family signature 283 299 2.1E-68 T 22-04-2016 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PRINTS PR00145 Argininosuccinate lyase family signature 201 217 2.1E-68 T 22-04-2016 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 PRINTS PR00145 Argininosuccinate lyase family signature 109 131 2.1E-68 T 22-04-2016 JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 Gene3D G3DSA:1.10.275.10 11 114 1.2E-36 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal JE55_RS13320 280d71e8224864451e44d0258bcaf31e 469 Pfam PF00206 Lyase 15 308 9.9E-73 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal JE55_RS15870 5ae98e8b938cce1c938255f5d2549506 111 Pfam PF01906 Putative heavy-metal-binding 6 106 2.4E-32 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 JE55_RS15870 5ae98e8b938cce1c938255f5d2549506 111 PANTHER PTHR34068 6 106 5.1E-25 T 22-04-2016 JE55_RS15870 5ae98e8b938cce1c938255f5d2549506 111 Gene3D G3DSA:3.30.110.70 6 106 3.5E-34 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 JE55_RS15870 5ae98e8b938cce1c938255f5d2549506 111 SUPERFAMILY SSF117782 6 106 2.09E-33 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 JE55_RS15870 5ae98e8b938cce1c938255f5d2549506 111 PANTHER PTHR34068:SF3 6 106 5.1E-25 T 22-04-2016 JE55_RS15870 5ae98e8b938cce1c938255f5d2549506 111 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 5 107 22.039 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 JE55_RS12265 e36a2a33cfd0a72445d3411bcdd61cc1 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 104 1.7E-27 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 Pfam PF00375 Sodium:dicarboxylate symporter family 10 404 1.2E-112 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 Gene3D G3DSA:1.10.3860.10 2 409 1.8E-115 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 SUPERFAMILY SSF118215 9 405 7.72E-113 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 PANTHER PTHR11958 1 410 8.8E-167 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 4.8E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 4.8E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 4.8E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 82 107 4.8E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 4.8E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 52 72 4.8E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 149 171 4.8E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 4.8E-40 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 JE55_RS16690 11e13aa00a01718893e3f71d0ab4624d 435 PANTHER PTHR11958:SF26 1 410 8.8E-167 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 JE55_RS08775 80f9db9bee99f264ed6aadab74eada92 291 Gene3D G3DSA:3.40.50.150 18 261 2.5E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS08775 80f9db9bee99f264ed6aadab74eada92 291 PANTHER PTHR10108:SF855 15 168 1.5E-22 T 22-04-2016 JE55_RS08775 80f9db9bee99f264ed6aadab74eada92 291 PANTHER PTHR10108 15 168 1.5E-22 T 22-04-2016 JE55_RS08775 80f9db9bee99f264ed6aadab74eada92 291 Pfam PF13649 Methyltransferase domain 51 141 5.3E-18 T 22-04-2016 JE55_RS08775 80f9db9bee99f264ed6aadab74eada92 291 SUPERFAMILY SSF53335 27 222 5.48E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS17670 5832e4a23a83c92623cef2033373c414 347 PANTHER PTHR30137 1 347 6.7E-51 T 22-04-2016 JE55_RS17670 5832e4a23a83c92623cef2033373c414 347 Pfam PF00296 Luciferase-like monooxygenase 1 315 3.3E-62 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JE55_RS17670 5832e4a23a83c92623cef2033373c414 347 Gene3D G3DSA:3.20.20.30 1 347 3.8E-89 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JE55_RS17670 5832e4a23a83c92623cef2033373c414 347 SUPERFAMILY SSF51679 1 346 9.3E-82 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JE55_RS01050 fbe88c5a8ca2c17bb0a4fd2160bd6594 254 SUPERFAMILY SSF52833 39 152 1.49E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS01050 fbe88c5a8ca2c17bb0a4fd2160bd6594 254 Pfam PF05988 Bacterial protein of unknown function (DUF899) 1 251 3.1E-94 T 22-04-2016 IPR010296 Protein of unknown function DUF899, thioredoxin-like JE55_RS01050 fbe88c5a8ca2c17bb0a4fd2160bd6594 254 Gene3D G3DSA:3.40.30.10 54 158 9.8E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 SUPERFAMILY SSF51735 1 181 3.09E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 SUPERFAMILY SSF55347 154 315 4.46E-69 T 22-04-2016 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 Gene3D G3DSA:3.40.50.720 1 163 5.3E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 1.3E-59 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 PANTHER PTHR10836 1 334 3.7E-203 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 PIRSF PIRSF000149 1 336 2.5E-136 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 2.4E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 2.4E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 2.4E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 2.4E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 2.4E-40 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 1.6E-129 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 PANTHER PTHR10836:SF50 1 334 3.7E-203 T 22-04-2016 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 315 4.7E-63 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 SMART SM00846 3 155 1.2E-97 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 JE55_RS05845 866e14d008cc6de57a3137a1dd1fea7c 336 Gene3D G3DSA:3.30.360.10 164 317 1.2E-71 T 22-04-2016 JE55_RS16920 ab5c224b9ab15a51beb4aa209ec22440 241 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 78 2.8E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 JE55_RS16920 ab5c224b9ab15a51beb4aa209ec22440 241 PANTHER PTHR30085 9 241 1.3E-61 T 22-04-2016 JE55_RS16920 ab5c224b9ab15a51beb4aa209ec22440 241 SUPERFAMILY SSF161098 13 220 9.55E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16920 ab5c224b9ab15a51beb4aa209ec22440 241 PANTHER PTHR30085:SF1 9 241 1.3E-61 T 22-04-2016 JE55_RS16920 ab5c224b9ab15a51beb4aa209ec22440 241 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 224 4.9E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16920 ab5c224b9ab15a51beb4aa209ec22440 241 Gene3D G3DSA:1.10.3720.10 12 235 2.0E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS06300 922d07eca32be41a7b1945a75c26cd77 367 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 4.6E-38 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS06300 922d07eca32be41a7b1945a75c26cd77 367 SUPERFAMILY SSF53756 7 359 5.5E-122 T 22-04-2016 JE55_RS06300 922d07eca32be41a7b1945a75c26cd77 367 Gene3D G3DSA:3.40.50.2000 258 338 1.1E-4 T 22-04-2016 JE55_RS06300 922d07eca32be41a7b1945a75c26cd77 367 Gene3D G3DSA:3.40.50.2000 4 196 2.3E-68 T 22-04-2016 JE55_RS06300 922d07eca32be41a7b1945a75c26cd77 367 PANTHER PTHR21015 1 364 9.7E-116 T 22-04-2016 JE55_RS06300 922d07eca32be41a7b1945a75c26cd77 367 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 359 36.295 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS06300 922d07eca32be41a7b1945a75c26cd77 367 PANTHER PTHR21015:SF22 1 364 9.7E-116 T 22-04-2016 JE55_RS06300 922d07eca32be41a7b1945a75c26cd77 367 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 354 1.3E-101 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS06300 922d07eca32be41a7b1945a75c26cd77 367 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 346 1.7E-37 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS13405 f33dda6f8fb6f58b2f42c9684bc98ba9 293 PANTHER PTHR34477:SF1 1 100 1.2E-31 T 22-04-2016 JE55_RS13405 f33dda6f8fb6f58b2f42c9684bc98ba9 293 Pfam PF01541 GIY-YIG catalytic domain 3 70 3.3E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily JE55_RS13405 f33dda6f8fb6f58b2f42c9684bc98ba9 293 PANTHER PTHR34477 1 100 1.2E-31 T 22-04-2016 JE55_RS13405 f33dda6f8fb6f58b2f42c9684bc98ba9 293 SUPERFAMILY SSF82771 1 69 1.96E-9 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily JE55_RS04845 757acb280fc3581042b42216c299ec7f 341 Pfam PF13103 TonB C terminal 257 337 1.0E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 JE55_RS04845 757acb280fc3581042b42216c299ec7f 341 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 282 338 5.7E-9 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 JE55_RS04845 757acb280fc3581042b42216c299ec7f 341 TIGRFAM TIGR02794 tolA_full: protein TolA 23 338 1.1E-57 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 JE55_RS04845 757acb280fc3581042b42216c299ec7f 341 SUPERFAMILY SSF74653 252 338 1.44E-15 T 22-04-2016 JE55_RS04845 757acb280fc3581042b42216c299ec7f 341 Gene3D G3DSA:3.30.1150.10 237 339 9.5E-26 T 22-04-2016 JE55_RS10115 9d804d0705a76ed0df738e34d0ae5d87 311 Pfam PF00682 HMGL-like 7 280 5.9E-54 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 JE55_RS10115 9d804d0705a76ed0df738e34d0ae5d87 311 PANTHER PTHR10277 2 296 2.2E-169 T 22-04-2016 JE55_RS10115 9d804d0705a76ed0df738e34d0ae5d87 311 PANTHER PTHR10277:SF40 2 296 2.2E-169 T 22-04-2016 JE55_RS10115 9d804d0705a76ed0df738e34d0ae5d87 311 Gene3D G3DSA:3.20.20.70 5 291 1.7E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS10115 9d804d0705a76ed0df738e34d0ae5d87 311 SUPERFAMILY SSF51569 1 290 5.57E-73 T 22-04-2016 JE55_RS10115 9d804d0705a76ed0df738e34d0ae5d87 311 ProSitePatterns PS01062 Hydroxymethylglutaryl-coenzyme A lyase active site. 233 242 - T 22-04-2016 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site GO:0004419 KEGG: 00072+4.1.3.4|KEGG: 00280+4.1.3.4|KEGG: 00281+4.1.3.4|KEGG: 00650+4.1.3.4|MetaCyc: PWY-5074|UniPathway: UPA00896 JE55_RS09530 0e3d9f3fa3ec34fe5490d91a8c2f54e1 150 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 140 7.5E-32 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 JE55_RS09530 0e3d9f3fa3ec34fe5490d91a8c2f54e1 150 PANTHER PTHR38786 1 149 2.3E-30 T 22-04-2016 JE55_RS09530 0e3d9f3fa3ec34fe5490d91a8c2f54e1 150 Pfam PF02050 Flagellar FliJ protein 19 139 7.4E-34 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 JE55_RS09530 0e3d9f3fa3ec34fe5490d91a8c2f54e1 150 PRINTS PR01004 Flagellar FliJ protein signature 126 146 1.5E-9 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 JE55_RS09530 0e3d9f3fa3ec34fe5490d91a8c2f54e1 150 PRINTS PR01004 Flagellar FliJ protein signature 86 107 1.5E-9 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 JE55_RS09530 0e3d9f3fa3ec34fe5490d91a8c2f54e1 150 PRINTS PR01004 Flagellar FliJ protein signature 44 61 1.5E-9 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 JE55_RS09530 0e3d9f3fa3ec34fe5490d91a8c2f54e1 150 PRINTS PR01004 Flagellar FliJ protein signature 4 26 1.5E-9 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 JE55_RS09530 0e3d9f3fa3ec34fe5490d91a8c2f54e1 150 PRINTS PR01004 Flagellar FliJ protein signature 63 84 1.5E-9 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 JE55_RS09530 0e3d9f3fa3ec34fe5490d91a8c2f54e1 150 PIRSF PIRSF019404 1 148 4.6E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 JE55_RS12625 1a983dda085d8cc178eb240d5fc826fc 333 PANTHER PTHR30349 42 332 2.6E-100 T 22-04-2016 JE55_RS12625 1a983dda085d8cc178eb240d5fc826fc 333 Gene3D G3DSA:1.10.150.130 44 135 1.8E-22 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal JE55_RS12625 1a983dda085d8cc178eb240d5fc826fc 333 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 45 126 8.2E-18 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JE55_RS12625 1a983dda085d8cc178eb240d5fc826fc 333 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 41 333 59.339 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 JE55_RS12625 1a983dda085d8cc178eb240d5fc826fc 333 PANTHER PTHR30349:SF5 42 332 2.6E-100 T 22-04-2016 JE55_RS12625 1a983dda085d8cc178eb240d5fc826fc 333 Pfam PF00589 Phage integrase family 149 318 3.8E-49 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS12625 1a983dda085d8cc178eb240d5fc826fc 333 Gene3D G3DSA:1.10.443.10 149 323 8.0E-57 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS12625 1a983dda085d8cc178eb240d5fc826fc 333 SUPERFAMILY SSF56349 144 330 7.65E-55 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS12625 1a983dda085d8cc178eb240d5fc826fc 333 SUPERFAMILY SSF47823 41 136 7.65E-29 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal JE55_RS12625 1a983dda085d8cc178eb240d5fc826fc 333 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 41 333 29.483 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD JE55_RS12625 1a983dda085d8cc178eb240d5fc826fc 333 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 47 332 5.6E-111 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 JE55_RS17790 77666c0b2ddee70002cf09ced7b80325 833 PANTHER PTHR30451:SF2 1 833 1.2E-260 T 22-04-2016 JE55_RS17790 77666c0b2ddee70002cf09ced7b80325 833 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 299 309 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site JE55_RS17790 77666c0b2ddee70002cf09ced7b80325 833 Pfam PF13953 PapC C-terminal domain 752 817 1.7E-17 T 22-04-2016 IPR025949 PapC-like, C-terminal domain JE55_RS17790 77666c0b2ddee70002cf09ced7b80325 833 Pfam PF13954 PapC N-terminal domain 20 168 7.0E-45 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 JE55_RS17790 77666c0b2ddee70002cf09ced7b80325 833 Pfam PF00577 Outer membrane usher protein 188 743 1.4E-166 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 JE55_RS17790 77666c0b2ddee70002cf09ced7b80325 833 SUPERFAMILY SSF141729 19 146 1.31E-33 T 22-04-2016 JE55_RS17790 77666c0b2ddee70002cf09ced7b80325 833 PANTHER PTHR30451 1 833 1.2E-260 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14240 2de28b4ecabc846e2cfcb69d4940fb5c 213 Gene3D G3DSA:1.20.58.320 23 107 5.6E-29 T 22-04-2016 JE55_RS14240 2de28b4ecabc846e2cfcb69d4940fb5c 213 Gene3D G3DSA:1.25.40.10 109 213 1.1E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS14240 2de28b4ecabc846e2cfcb69d4940fb5c 213 PANTHER PTHR23004:SF7 44 213 1.2E-61 T 22-04-2016 JE55_RS14240 2de28b4ecabc846e2cfcb69d4940fb5c 213 Pfam PF06041 Bacterial protein of unknown function (DUF924) 28 210 1.0E-57 T 22-04-2016 IPR010323 Protein of unknown function DUF924 JE55_RS14240 2de28b4ecabc846e2cfcb69d4940fb5c 213 PANTHER PTHR23004 44 213 1.2E-61 T 22-04-2016 JE55_RS14240 2de28b4ecabc846e2cfcb69d4940fb5c 213 SUPERFAMILY SSF48452 23 209 6.07E-60 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS01160 aba239e0f6078b56c37637cb72f93ac6 463 SMART SM00228 225 292 1.4E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS01160 aba239e0f6078b56c37637cb72f93ac6 463 SUPERFAMILY SSF50156 211 302 7.1E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS01160 aba239e0f6078b56c37637cb72f93ac6 463 Gene3D G3DSA:2.30.42.10 98 186 4.0E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS01160 aba239e0f6078b56c37637cb72f93ac6 463 Gene3D G3DSA:2.30.42.10 213 307 5.9E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS01160 aba239e0f6078b56c37637cb72f93ac6 463 PANTHER PTHR22939 220 462 6.0E-66 T 22-04-2016 JE55_RS01160 aba239e0f6078b56c37637cb72f93ac6 463 Pfam PF13180 PDZ domain 233 299 4.3E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS01160 aba239e0f6078b56c37637cb72f93ac6 463 PANTHER PTHR22939:SF78 220 462 6.0E-66 T 22-04-2016 JE55_RS01160 aba239e0f6078b56c37637cb72f93ac6 463 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 461 6.8E-97 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 JE55_RS01160 aba239e0f6078b56c37637cb72f93ac6 463 Pfam PF02163 Peptidase family M50 9 448 2.7E-75 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 JE55_RS17235 9a28dca2d7d86bace1c10dcd44df07d4 164 PANTHER PTHR33164:SF4 1 159 8.4E-36 T 22-04-2016 JE55_RS17235 9a28dca2d7d86bace1c10dcd44df07d4 164 Gene3D G3DSA:1.10.10.10 8 158 1.4E-38 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17235 9a28dca2d7d86bace1c10dcd44df07d4 164 SMART SM00347 43 146 1.3E-25 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS17235 9a28dca2d7d86bace1c10dcd44df07d4 164 ProSitePatterns PS01117 MarR-type HTH domain signature. 85 119 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site JE55_RS17235 9a28dca2d7d86bace1c10dcd44df07d4 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 106 122 3.7E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS17235 9a28dca2d7d86bace1c10dcd44df07d4 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 136 156 3.7E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS17235 9a28dca2d7d86bace1c10dcd44df07d4 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 86 3.7E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS17235 9a28dca2d7d86bace1c10dcd44df07d4 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 102 3.7E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS17235 9a28dca2d7d86bace1c10dcd44df07d4 164 Pfam PF12802 MarR family 48 110 4.8E-15 T 22-04-2016 JE55_RS17235 9a28dca2d7d86bace1c10dcd44df07d4 164 SUPERFAMILY SSF46785 11 158 1.46E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17235 9a28dca2d7d86bace1c10dcd44df07d4 164 PANTHER PTHR33164 1 159 8.4E-36 T 22-04-2016 JE55_RS06005 37c36c243a5f2934db36ab6aa8deefcc 157 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 113 130 - T 22-04-2016 IPR001882 Biotin-binding site JE55_RS06005 37c36c243a5f2934db36ab6aa8deefcc 157 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 7.4E-57 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 JE55_RS06005 37c36c243a5f2934db36ab6aa8deefcc 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 103 117 2.4E-20 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 JE55_RS06005 37c36c243a5f2934db36ab6aa8deefcc 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 86 99 2.4E-20 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 JE55_RS06005 37c36c243a5f2934db36ab6aa8deefcc 157 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 118 131 2.4E-20 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 JE55_RS06005 37c36c243a5f2934db36ab6aa8deefcc 157 Pfam PF00364 Biotin-requiring enzyme 83 156 2.1E-26 T 22-04-2016 IPR000089 Biotin/lipoyl attachment JE55_RS06005 37c36c243a5f2934db36ab6aa8deefcc 157 Gene3D G3DSA:2.40.50.100 80 156 1.3E-33 T 22-04-2016 JE55_RS06005 37c36c243a5f2934db36ab6aa8deefcc 157 PANTHER PTHR23151 1 156 2.2E-46 T 22-04-2016 JE55_RS06005 37c36c243a5f2934db36ab6aa8deefcc 157 SUPERFAMILY SSF51230 82 156 4.97E-26 T 22-04-2016 IPR011053 Single hybrid motif JE55_RS13070 866491453ec50b5d3afa471b5d8e2c63 180 Pfam PF06073 Bacterial protein of unknown function (DUF934) 61 167 3.6E-44 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 JE55_RS13070 866491453ec50b5d3afa471b5d8e2c63 180 PIRSF PIRSF030820 1 176 1.9E-59 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 435 3.2E-30 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 PANTHER PTHR11938 1 31 5.8E-128 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 PANTHER PTHR11938 134 143 5.8E-128 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 PANTHER PTHR11938 170 300 5.8E-128 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 489 1.6E-286 T 22-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 Pfam PF13247 4Fe-4S dicluster domain 175 271 1.6E-36 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 Gene3D G3DSA:3.30.70.20 436 465 1.6E-72 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 Gene3D G3DSA:3.30.70.20 236 358 1.6E-72 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 Gene3D G3DSA:1.10.3650.10 359 434 2.0E-30 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 SUPERFAMILY SSF54862 1 499 6.8E-176 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 Gene3D G3DSA:3.30.70.20 196 235 4.3E-24 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 Gene3D G3DSA:3.30.70.20 10 26 1.9E-10 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 Gene3D G3DSA:3.30.70.20 174 195 1.9E-10 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 Gene3D G3DSA:3.30.70.20 125 133 1.9E-10 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 PANTHER PTHR11938:SF8 1 31 5.8E-128 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 PANTHER PTHR11938:SF8 134 143 5.8E-128 T 22-04-2016 JE55_RS02275 b55e960cd199f6bb7c8a0b57d7374ab8 517 PANTHER PTHR11938:SF8 170 300 5.8E-128 T 22-04-2016 JE55_RS07245 54f60080a6731cb4f13efc5931c61df3 108 SUPERFAMILY SSF54913 3 103 7.41E-31 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta JE55_RS07245 54f60080a6731cb4f13efc5931c61df3 108 Gene3D G3DSA:3.30.70.830 3 104 5.4E-35 T 22-04-2016 JE55_RS07245 54f60080a6731cb4f13efc5931c61df3 108 Pfam PF03091 CutA1 divalent ion tolerance protein 4 100 1.6E-30 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 JE55_RS07245 54f60080a6731cb4f13efc5931c61df3 108 PANTHER PTHR23419 1 104 1.3E-29 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 JE55_RS08900 c1982ee292b5ec2fd696f69c93327357 278 Pfam PF07848 PaaX-like protein 6 64 5.9E-5 T 22-04-2016 IPR012906 PaaX-like, N-terminal UniPathway: UPA00930 JE55_RS08900 c1982ee292b5ec2fd696f69c93327357 278 Pfam PF08223 PaaX-like protein C-terminal domain 87 246 4.0E-35 T 22-04-2016 IPR013225 PaaX-like, C-terminal UniPathway: UPA00930 JE55_RS08900 c1982ee292b5ec2fd696f69c93327357 278 Gene3D G3DSA:1.10.10.10 31 72 3.1E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 ProSitePatterns PS00801 Transketolase signature 1. 32 52 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 PANTHER PTHR11624 356 690 0.0 T 22-04-2016 IPR033247 Transketolase family JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 PANTHER PTHR11624 20 323 0.0 T 22-04-2016 IPR033247 Transketolase family JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 SMART SM00861 374 549 9.5E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 Gene3D G3DSA:3.40.50.920 562 689 9.1E-50 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 Gene3D G3DSA:3.40.50.970 19 338 4.4E-131 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 Gene3D G3DSA:3.40.50.970 346 557 2.3E-76 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 SUPERFAMILY SSF52518 369 548 2.26E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 SUPERFAMILY SSF52922 557 690 3.4E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 PANTHER PTHR11624:SF1 356 690 0.0 T 22-04-2016 JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 PANTHER PTHR11624:SF1 20 323 0.0 T 22-04-2016 JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 Pfam PF02779 Transketolase, pyrimidine binding domain 373 547 1.9E-43 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 SUPERFAMILY SSF52518 22 339 3.33E-120 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 25 353 6.9E-160 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 TIGRFAM TIGR00232 tktlase_bact: transketolase 27 689 7.4E-292 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 JE55_RS05850 6e3aa6b38e020eea3b048028c7c1e58d 690 Pfam PF02780 Transketolase, C-terminal domain 577 681 1.6E-17 T 22-04-2016 IPR033248 Transketolase, C-terminal domain JE55_RS04440 c1904fceb8bbee8d2ed34bf9a0b4f68a 289 PANTHER PTHR10434:SF8 4 177 1.6E-32 T 22-04-2016 JE55_RS04440 c1904fceb8bbee8d2ed34bf9a0b4f68a 289 SMART SM00563 64 176 6.1E-34 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 JE55_RS04440 c1904fceb8bbee8d2ed34bf9a0b4f68a 289 PANTHER PTHR10434 4 177 1.6E-32 T 22-04-2016 JE55_RS04440 c1904fceb8bbee8d2ed34bf9a0b4f68a 289 Pfam PF01553 Acyltransferase 52 172 2.3E-25 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 JE55_RS04440 c1904fceb8bbee8d2ed34bf9a0b4f68a 289 Gene3D G3DSA:3.40.1130.10 35 177 3.8E-12 T 22-04-2016 JE55_RS04440 c1904fceb8bbee8d2ed34bf9a0b4f68a 289 SUPERFAMILY SSF69593 48 243 4.45E-25 T 22-04-2016 JE55_RS15350 b9e53ff9656c49af2c0dc1c5eef96669 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 32 426 2.6E-71 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 JE55_RS15350 b9e53ff9656c49af2c0dc1c5eef96669 463 PANTHER PTHR11206:SF94 21 444 4.6E-104 T 22-04-2016 JE55_RS15350 b9e53ff9656c49af2c0dc1c5eef96669 463 Pfam PF01554 MatE 32 188 2.3E-21 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 JE55_RS15350 b9e53ff9656c49af2c0dc1c5eef96669 463 Pfam PF01554 MatE 276 409 1.4E-17 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 JE55_RS15350 b9e53ff9656c49af2c0dc1c5eef96669 463 PANTHER PTHR11206 21 444 4.6E-104 T 22-04-2016 JE55_RS17435 6eefa24852980c5ac1aa54566b0632ae 356 Gene3D G3DSA:3.40.640.10 1 246 3.6E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS17435 6eefa24852980c5ac1aa54566b0632ae 356 SUPERFAMILY SSF53383 1 339 3.23E-108 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS17435 6eefa24852980c5ac1aa54566b0632ae 356 Gene3D G3DSA:3.90.1150.10 249 340 5.6E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS17435 6eefa24852980c5ac1aa54566b0632ae 356 PANTHER PTHR10289 1 340 2.6E-137 T 22-04-2016 JE55_RS17435 6eefa24852980c5ac1aa54566b0632ae 356 PIRSF PIRSF017617 1 352 1.7E-118 T 22-04-2016 IPR023603 Threonine aldolase JE55_RS17435 6eefa24852980c5ac1aa54566b0632ae 356 Pfam PF01212 Beta-eliminating lyase 3 288 7.9E-83 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 JE55_RS17435 6eefa24852980c5ac1aa54566b0632ae 356 PANTHER PTHR10289:SF5 1 340 2.6E-137 T 22-04-2016 JE55_RS10245 d4f98c17a017661ca29d5bf4771a70da 1191 PANTHER PTHR18968:SF134 371 767 2.4E-175 T 22-04-2016 JE55_RS10245 d4f98c17a017661ca29d5bf4771a70da 1191 PANTHER PTHR18968 371 767 2.4E-175 T 22-04-2016 JE55_RS10245 d4f98c17a017661ca29d5bf4771a70da 1191 Gene3D G3DSA:3.40.50.970 494 674 2.1E-9 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS10245 d4f98c17a017661ca29d5bf4771a70da 1191 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 462 545 2.1E-5 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JE55_RS10245 d4f98c17a017661ca29d5bf4771a70da 1191 SUPERFAMILY SSF52518 441 628 1.08E-14 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS10245 d4f98c17a017661ca29d5bf4771a70da 1191 SUPERFAMILY SSF52518 28 210 4.59E-17 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS10245 d4f98c17a017661ca29d5bf4771a70da 1191 Gene3D G3DSA:3.40.920.10 732 926 6.2E-16 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JE55_RS10245 d4f98c17a017661ca29d5bf4771a70da 1191 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 739 926 7.8E-18 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JE55_RS10245 d4f98c17a017661ca29d5bf4771a70da 1191 SUPERFAMILY SSF53323 731 971 1.31E-24 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JE55_RS07045 da3eb89ac34ba7366bf4679f71070c38 319 PRINTS PR01805 VacJ lipoprotein signature 136 153 2.06E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 JE55_RS07045 da3eb89ac34ba7366bf4679f71070c38 319 PRINTS PR01805 VacJ lipoprotein signature 32 45 2.06E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 JE55_RS07045 da3eb89ac34ba7366bf4679f71070c38 319 PRINTS PR01805 VacJ lipoprotein signature 100 117 2.06E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 JE55_RS07045 da3eb89ac34ba7366bf4679f71070c38 319 PRINTS PR01805 VacJ lipoprotein signature 49 65 2.06E-29 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 JE55_RS07045 da3eb89ac34ba7366bf4679f71070c38 319 PANTHER PTHR30035 32 222 1.7E-61 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 JE55_RS07045 da3eb89ac34ba7366bf4679f71070c38 319 Pfam PF04333 MlaA lipoprotein 32 223 1.0E-76 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 JE55_RS07045 da3eb89ac34ba7366bf4679f71070c38 319 PANTHER PTHR30035:SF3 32 222 1.7E-61 T 22-04-2016 JE55_RS11870 92acb48a37ef77f6493d5ebe31619108 253 Gene3D G3DSA:1.10.760.10 136 228 7.4E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11870 92acb48a37ef77f6493d5ebe31619108 253 Pfam PF00034 Cytochrome c 142 226 2.3E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11870 92acb48a37ef77f6493d5ebe31619108 253 Pfam PF00034 Cytochrome c 56 98 8.7E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11870 92acb48a37ef77f6493d5ebe31619108 253 SUPERFAMILY SSF46626 57 126 9.79E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11870 92acb48a37ef77f6493d5ebe31619108 253 PANTHER PTHR33751:SF2 52 235 2.6E-76 T 22-04-2016 JE55_RS11870 92acb48a37ef77f6493d5ebe31619108 253 PIRSF PIRSF000005 9 230 6.9E-64 T 22-04-2016 IPR024167 Cytochrome c4 GO:0005506|GO:0009055|GO:0020037|GO:0042597 JE55_RS11870 92acb48a37ef77f6493d5ebe31619108 253 SUPERFAMILY SSF46626 128 228 1.89E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11870 92acb48a37ef77f6493d5ebe31619108 253 PANTHER PTHR33751 52 235 2.6E-76 T 22-04-2016 JE55_RS11870 92acb48a37ef77f6493d5ebe31619108 253 Gene3D G3DSA:1.10.760.10 49 122 9.2E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 Gene3D G3DSA:1.10.1780.10 1 147 4.0E-45 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 714 728 1.2E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 681 699 1.2E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 607 625 1.2E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 652 670 1.2E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 PANTHER PTHR11638 1 516 0.0 T 22-04-2016 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 PANTHER PTHR11638 532 862 0.0 T 22-04-2016 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 SMART SM00382 603 773 5.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 SMART SM00382 198 343 1.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 Gene3D G3DSA:3.40.50.300 159 342 1.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 SMART SM01086 771 860 1.3E-32 T 22-04-2016 IPR019489 Clp ATPase, C-terminal JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 PANTHER PTHR11638:SF18 1 516 0.0 T 22-04-2016 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 PANTHER PTHR11638:SF18 532 862 0.0 T 22-04-2016 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 Gene3D G3DSA:3.40.50.300 558 782 7.0E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 860 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 335 4.0E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 Gene3D G3DSA:1.10.8.60 343 428 5.3E-37 T 22-04-2016 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 637 655 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 SUPERFAMILY SSF52540 552 859 7.47E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 771 849 1.9E-22 T 22-04-2016 IPR019489 Clp ATPase, C-terminal JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 SUPERFAMILY SSF81923 4 156 1.07E-40 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 SUPERFAMILY SSF52540 159 550 2.9E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 Pfam PF07724 AAA domain (Cdc48 subfamily) 602 764 1.1E-54 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 Gene3D G3DSA:1.10.8.60 783 861 3.6E-28 T 22-04-2016 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 5.3E-9 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 JE55_RS00305 4e45271f0d61f1714302f0f991171d5c 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.2E-12 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 JE55_RS09590 9ff54a82ded00eb444e904856bc57f39 467 PANTHER PTHR11785 2 460 9.2E-212 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS09590 9ff54a82ded00eb444e904856bc57f39 467 PIRSF PIRSF006060 5 466 1.1E-89 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS09590 9ff54a82ded00eb444e904856bc57f39 467 PANTHER PTHR11785:SF405 2 460 9.2E-212 T 22-04-2016 JE55_RS09590 9ff54a82ded00eb444e904856bc57f39 467 Pfam PF13520 Amino acid permease 25 432 7.8E-65 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS03000 01b3ef2c8347937b6f4c7f0f432e1ba0 179 Pfam PF01381 Helix-turn-helix 31 74 1.1E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JE55_RS03000 01b3ef2c8347937b6f4c7f0f432e1ba0 179 SMART SM00530 18 75 0.0038 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JE55_RS03000 01b3ef2c8347937b6f4c7f0f432e1ba0 179 Gene3D G3DSA:1.10.260.40 31 90 4.2E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS03000 01b3ef2c8347937b6f4c7f0f432e1ba0 179 SUPERFAMILY SSF47413 20 80 2.48E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS11880 1921541b583301055e68e8e71036300f 382 Gene3D G3DSA:3.30.390.10 1 114 2.5E-49 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JE55_RS11880 1921541b583301055e68e8e71036300f 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 JE55_RS11880 1921541b583301055e68e8e71036300f 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 JE55_RS11880 1921541b583301055e68e8e71036300f 382 PANTHER PTHR13794 1 382 1.7E-147 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 JE55_RS11880 1921541b583301055e68e8e71036300f 382 Gene3D G3DSA:3.20.20.120 115 349 7.0E-87 T 22-04-2016 IPR029065 Enolase C-terminal domain-like JE55_RS11880 1921541b583301055e68e8e71036300f 382 Pfam PF13378 Enolase C-terminal domain-like 129 355 7.3E-63 T 22-04-2016 IPR029065 Enolase C-terminal domain-like JE55_RS11880 1921541b583301055e68e8e71036300f 382 PANTHER PTHR13794:SF4 1 382 1.7E-147 T 22-04-2016 JE55_RS11880 1921541b583301055e68e8e71036300f 382 SUPERFAMILY SSF51604 95 361 6.68E-78 T 22-04-2016 IPR029065 Enolase C-terminal domain-like JE55_RS11880 1921541b583301055e68e8e71036300f 382 SMART SM00922 125 230 5.4E-22 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JE55_RS11880 1921541b583301055e68e8e71036300f 382 SUPERFAMILY SSF54826 1 112 5.63E-33 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 JE55_RS11880 1921541b583301055e68e8e71036300f 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 5.7E-28 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain JE55_RS06830 44ca6ae7cc93e432cf0a0ec0ca58ba1f 304 TIGRFAM TIGR04474 tcm_partner: three-Cys-motif partner protein 42 284 3.6E-40 T 22-04-2016 IPR031009 Three-Cys-motif partner protein JE55_RS07210 569dc26b3d9ab65814886f56055cf924 331 SUPERFAMILY SSF56524 77 327 2.49E-92 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 JE55_RS07210 569dc26b3d9ab65814886f56055cf924 331 PANTHER PTHR19372:SF1 78 326 2.2E-136 T 22-04-2016 JE55_RS07210 569dc26b3d9ab65814886f56055cf924 331 Gene3D G3DSA:3.90.420.10 77 328 1.4E-70 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 JE55_RS07210 569dc26b3d9ab65814886f56055cf924 331 PANTHER PTHR19372 78 326 2.2E-136 T 22-04-2016 JE55_RS07210 569dc26b3d9ab65814886f56055cf924 331 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 12 331 62.093 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 JE55_RS07210 569dc26b3d9ab65814886f56055cf924 331 Pfam PF00174 Oxidoreductase molybdopterin binding domain 110 265 2.1E-27 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 JE55_RS06610 e739651957ae3132f761c91e5830fe66 285 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 24 278 3.4E-85 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 JE55_RS06610 e739651957ae3132f761c91e5830fe66 285 PANTHER PTHR18895:SF64 16 277 2.6E-85 T 22-04-2016 JE55_RS06610 e739651957ae3132f761c91e5830fe66 285 Pfam PF05175 Methyltransferase small domain 96 199 2.7E-12 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 JE55_RS06610 e739651957ae3132f761c91e5830fe66 285 PANTHER PTHR18895 16 277 2.6E-85 T 22-04-2016 JE55_RS06610 e739651957ae3132f761c91e5830fe66 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 188 194 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JE55_RS06610 e739651957ae3132f761c91e5830fe66 285 SUPERFAMILY SSF53335 11 278 6.51E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS06610 e739651957ae3132f761c91e5830fe66 285 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 283 45.753 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 JE55_RS06610 e739651957ae3132f761c91e5830fe66 285 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 22 279 6.0E-61 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 JE55_RS06610 e739651957ae3132f761c91e5830fe66 285 Gene3D G3DSA:1.10.8.10 11 84 1.5E-24 T 22-04-2016 JE55_RS06610 e739651957ae3132f761c91e5830fe66 285 Gene3D G3DSA:3.40.50.150 87 281 1.4E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 SUPERFAMILY SSF51735 4 257 2.63E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 0.0022 T 22-04-2016 JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 254 4.5E-62 T 22-04-2016 JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 PANTHER PTHR24322 10 138 1.9E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 PANTHER PTHR24322 154 190 1.9E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.4E-10 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 Gene3D G3DSA:3.40.50.720 2 257 1.9E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12425 f0013a5fb9194356b41de4b076e11a95 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS17225 6197d360d4f6ca5b374efd44d688b34b 521 Gene3D G3DSA:2.60.40.10 430 505 9.8E-7 T 22-04-2016 IPR013783 Immunoglobulin-like fold JE55_RS17225 6197d360d4f6ca5b374efd44d688b34b 521 Pfam PF02638 Glycosyl hydrolase-like 10 44 363 2.5E-92 T 22-04-2016 IPR003790 Glycosyl hydrolase-like 10 JE55_RS17225 6197d360d4f6ca5b374efd44d688b34b 521 PANTHER PTHR30032:SF2 7 214 5.5E-79 T 22-04-2016 JE55_RS17225 6197d360d4f6ca5b374efd44d688b34b 521 PANTHER PTHR30032:SF2 236 457 5.5E-79 T 22-04-2016 JE55_RS17225 6197d360d4f6ca5b374efd44d688b34b 521 SUPERFAMILY SSF51445 72 341 3.03E-20 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS17225 6197d360d4f6ca5b374efd44d688b34b 521 PANTHER PTHR30032 7 214 5.5E-79 T 22-04-2016 JE55_RS17225 6197d360d4f6ca5b374efd44d688b34b 521 PANTHER PTHR30032 236 457 5.5E-79 T 22-04-2016 JE55_RS11445 36ba85424f069afdebc7b775ed7b029e 264 SUPERFAMILY SSF51206 36 145 6.91E-11 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like JE55_RS11445 36ba85424f069afdebc7b775ed7b029e 264 Gene3D G3DSA:2.60.120.10 27 144 1.3E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS11445 36ba85424f069afdebc7b775ed7b029e 264 PANTHER PTHR24567 26 251 2.7E-44 T 22-04-2016 JE55_RS11445 36ba85424f069afdebc7b775ed7b029e 264 Gene3D G3DSA:1.10.10.10 177 232 3.9E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11445 36ba85424f069afdebc7b775ed7b029e 264 Pfam PF13545 Crp-like helix-turn-helix domain 168 231 2.3E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JE55_RS11445 36ba85424f069afdebc7b775ed7b029e 264 PANTHER PTHR24567:SF22 26 251 2.7E-44 T 22-04-2016 JE55_RS11445 36ba85424f069afdebc7b775ed7b029e 264 SUPERFAMILY SSF46785 165 237 8.68E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17800 bd79c00b0f935441adf007b9a84e8486 176 Gene3D G3DSA:2.60.40.1090 31 176 1.6E-41 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 JE55_RS17800 bd79c00b0f935441adf007b9a84e8486 176 SUPERFAMILY SSF49401 32 176 6.46E-37 T 22-04-2016 IPR008966 Adhesion domain JE55_RS17800 bd79c00b0f935441adf007b9a84e8486 176 PANTHER PTHR33420 6 176 4.5E-41 T 22-04-2016 JE55_RS17800 bd79c00b0f935441adf007b9a84e8486 176 Pfam PF00419 Fimbrial protein 33 176 1.9E-14 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 JE55_RS16155 07ebc71322d1e4fb733644b74b52290d 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 4.3E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS16155 07ebc71322d1e4fb733644b74b52290d 301 Pfam PF03466 LysR substrate binding domain 90 289 1.9E-45 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS16155 07ebc71322d1e4fb733644b74b52290d 301 PANTHER PTHR30537 1 301 8.8E-112 T 22-04-2016 JE55_RS16155 07ebc71322d1e4fb733644b74b52290d 301 Gene3D G3DSA:1.10.10.10 5 89 8.9E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16155 07ebc71322d1e4fb733644b74b52290d 301 Gene3D G3DSA:3.40.190.10 179 259 6.0E-22 T 22-04-2016 JE55_RS16155 07ebc71322d1e4fb733644b74b52290d 301 PANTHER PTHR30537:SF5 1 301 8.8E-112 T 22-04-2016 JE55_RS16155 07ebc71322d1e4fb733644b74b52290d 301 SUPERFAMILY SSF46785 5 112 3.35E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16155 07ebc71322d1e4fb733644b74b52290d 301 SUPERFAMILY SSF53850 92 294 2.71E-43 T 22-04-2016 JE55_RS16155 07ebc71322d1e4fb733644b74b52290d 301 Gene3D G3DSA:3.40.190.10 94 178 1.2E-24 T 22-04-2016 JE55_RS08015 92775cb54dc0beab3e56679cd6ec4388 70 Pfam PF01165 Ribosomal protein S21 4 56 9.0E-19 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 JE55_RS08015 92775cb54dc0beab3e56679cd6ec4388 70 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 42 6.0E-9 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 JE55_RS08015 92775cb54dc0beab3e56679cd6ec4388 70 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.4E-13 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 JE55_RS08015 92775cb54dc0beab3e56679cd6ec4388 70 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.4E-13 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 JE55_RS08015 92775cb54dc0beab3e56679cd6ec4388 70 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.4E-13 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 JE55_RS08015 92775cb54dc0beab3e56679cd6ec4388 70 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.4E-13 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 JE55_RS08015 92775cb54dc0beab3e56679cd6ec4388 70 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.7E-22 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 JE55_RS08015 92775cb54dc0beab3e56679cd6ec4388 70 PANTHER PTHR21109 1 60 8.5E-18 T 22-04-2016 JE55_RS08015 92775cb54dc0beab3e56679cd6ec4388 70 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.123 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 JE55_RS27550 105c89fbd0d74bd55558c3cadd7324ab 113 SUPERFAMILY SSF53474 3 91 4.56E-10 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS27550 105c89fbd0d74bd55558c3cadd7324ab 113 Gene3D G3DSA:3.40.50.1820 3 95 3.9E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS15285 524cd2ec92f70007e7a73ea50b3e0c1f 504 SUPERFAMILY SSF109604 317 502 5.65E-44 T 22-04-2016 JE55_RS15285 524cd2ec92f70007e7a73ea50b3e0c1f 504 SUPERFAMILY SSF53067 8 133 9.71E-33 T 22-04-2016 JE55_RS15285 524cd2ec92f70007e7a73ea50b3e0c1f 504 Gene3D G3DSA:3.30.420.40 3 131 2.4E-42 T 22-04-2016 JE55_RS15285 524cd2ec92f70007e7a73ea50b3e0c1f 504 PANTHER PTHR30005 1 500 4.5E-135 T 22-04-2016 JE55_RS15285 524cd2ec92f70007e7a73ea50b3e0c1f 504 SUPERFAMILY SSF53067 137 314 3.02E-39 T 22-04-2016 JE55_RS15285 524cd2ec92f70007e7a73ea50b3e0c1f 504 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 8 310 6.9E-96 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 JE55_RS15285 524cd2ec92f70007e7a73ea50b3e0c1f 504 Gene3D G3DSA:3.30.420.150 133 315 2.6E-50 T 22-04-2016 JE55_RS15285 524cd2ec92f70007e7a73ea50b3e0c1f 504 Pfam PF02541 Ppx/GppA phosphatase family 30 311 4.0E-68 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 JE55_RS15285 524cd2ec92f70007e7a73ea50b3e0c1f 504 PIRSF PIRSF001267 1 502 1.7E-197 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 JE55_RS15285 524cd2ec92f70007e7a73ea50b3e0c1f 504 PANTHER PTHR30005:SF4 1 500 4.5E-135 T 22-04-2016 JE55_RS04275 695116feff91b2c1c8f6657cf1ea7fae 230 PANTHER PTHR24220 3 230 4.6E-122 T 22-04-2016 JE55_RS04275 695116feff91b2c1c8f6657cf1ea7fae 230 SUPERFAMILY SSF52540 2 218 1.33E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04275 695116feff91b2c1c8f6657cf1ea7fae 230 Pfam PF00005 ABC transporter 17 159 2.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS04275 695116feff91b2c1c8f6657cf1ea7fae 230 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 230 4.7E-103 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE JE55_RS04275 695116feff91b2c1c8f6657cf1ea7fae 230 PANTHER PTHR24220:SF404 3 230 4.6E-122 T 22-04-2016 JE55_RS04275 695116feff91b2c1c8f6657cf1ea7fae 230 Gene3D G3DSA:3.40.50.300 1 218 7.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04275 695116feff91b2c1c8f6657cf1ea7fae 230 SMART SM00382 26 216 2.7E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS05840 ec5e0ce859aaaf3ffb86c9b8f3d8dd3a 399 Gene3D G3DSA:1.20.1250.20 221 386 1.8E-9 T 22-04-2016 JE55_RS05840 ec5e0ce859aaaf3ffb86c9b8f3d8dd3a 399 Pfam PF07690 Major Facilitator Superfamily 26 331 6.9E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS05840 ec5e0ce859aaaf3ffb86c9b8f3d8dd3a 399 PANTHER PTHR23501 7 379 4.7E-119 T 22-04-2016 JE55_RS05840 ec5e0ce859aaaf3ffb86c9b8f3d8dd3a 399 SUPERFAMILY SSF103473 8 389 1.83E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS05840 ec5e0ce859aaaf3ffb86c9b8f3d8dd3a 399 Gene3D G3DSA:1.20.1250.20 17 195 3.1E-16 T 22-04-2016 JE55_RS05840 ec5e0ce859aaaf3ffb86c9b8f3d8dd3a 399 PANTHER PTHR23501:SF79 7 379 4.7E-119 T 22-04-2016 JE55_RS01245 521f41de0c14fdd3e96f79b47125f663 315 SUPERFAMILY SSF103481 52 144 4.58E-9 T 22-04-2016 JE55_RS01245 521f41de0c14fdd3e96f79b47125f663 315 Pfam PF00892 EamA-like transporter family 156 292 3.5E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS01245 521f41de0c14fdd3e96f79b47125f663 315 SUPERFAMILY SSF103481 195 294 1.31E-11 T 22-04-2016 JE55_RS01245 521f41de0c14fdd3e96f79b47125f663 315 PANTHER PTHR22911 2 306 1.3E-26 T 22-04-2016 JE55_RS13075 11f759ecb77d5ef63e10b41b30210e3f 249 PANTHER PTHR23293 32 234 7.9E-69 T 22-04-2016 JE55_RS13075 11f759ecb77d5ef63e10b41b30210e3f 249 PANTHER PTHR23293:SF12 32 234 7.9E-69 T 22-04-2016 JE55_RS13075 11f759ecb77d5ef63e10b41b30210e3f 249 SUPERFAMILY SSF52402 18 196 2.13E-43 T 22-04-2016 JE55_RS13075 11f759ecb77d5ef63e10b41b30210e3f 249 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 39 232 9.5E-88 T 22-04-2016 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 JE55_RS13075 11f759ecb77d5ef63e10b41b30210e3f 249 PIRSF PIRSF000857 2 238 2.2E-78 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 JE55_RS13075 11f759ecb77d5ef63e10b41b30210e3f 249 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 38 208 1.4E-38 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 JE55_RS13075 11f759ecb77d5ef63e10b41b30210e3f 249 Gene3D G3DSA:3.40.50.620 12 204 6.0E-50 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS05095 7aa58e35c1733867ce8220d1b702b0cc 475 PANTHER PTHR12526 154 292 7.8E-112 T 22-04-2016 JE55_RS05095 7aa58e35c1733867ce8220d1b702b0cc 475 PANTHER PTHR12526 356 472 7.8E-112 T 22-04-2016 JE55_RS05095 7aa58e35c1733867ce8220d1b702b0cc 475 Gene3D G3DSA:3.90.550.10 1 274 4.8E-92 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS05095 7aa58e35c1733867ce8220d1b702b0cc 475 PANTHER PTHR12526:SF357 154 292 7.8E-112 T 22-04-2016 JE55_RS05095 7aa58e35c1733867ce8220d1b702b0cc 475 PANTHER PTHR12526:SF357 356 472 7.8E-112 T 22-04-2016 JE55_RS05095 7aa58e35c1733867ce8220d1b702b0cc 475 Pfam PF00483 Nucleotidyl transferase 5 290 5.6E-63 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 JE55_RS05095 7aa58e35c1733867ce8220d1b702b0cc 475 SUPERFAMILY SSF51182 188 473 1.41E-86 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS05095 7aa58e35c1733867ce8220d1b702b0cc 475 Pfam PF01050 Mannose-6-phosphate isomerase 318 468 1.1E-73 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 JE55_RS05095 7aa58e35c1733867ce8220d1b702b0cc 475 SUPERFAMILY SSF53448 1 283 1.69E-71 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS05095 7aa58e35c1733867ce8220d1b702b0cc 475 Gene3D G3DSA:2.60.120.10 361 473 9.9E-48 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS05095 7aa58e35c1733867ce8220d1b702b0cc 475 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3 472 2.8E-210 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 JE55_RS17930 466eac37bed9a09a04ab909d0a6c87db 176 SUPERFAMILY SSF160387 60 172 4.71E-35 T 22-04-2016 JE55_RS17930 466eac37bed9a09a04ab909d0a6c87db 176 Pfam PF05573 NosL 22 163 2.3E-49 T 22-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL JE55_RS17930 466eac37bed9a09a04ab909d0a6c87db 176 PANTHER PTHR41247 8 176 6.0E-30 T 22-04-2016 JE55_RS02455 717863ab589905b0c38b820890edab53 507 Pfam PF00221 Aromatic amino acid lyase 9 467 7.1E-187 T 22-04-2016 IPR001106 Aromatic amino acid lyase JE55_RS02455 717863ab589905b0c38b820890edab53 507 PANTHER PTHR10362 1 494 7.1E-240 T 22-04-2016 JE55_RS02455 717863ab589905b0c38b820890edab53 507 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 137 153 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 JE55_RS02455 717863ab589905b0c38b820890edab53 507 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 2 498 2.3E-209 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 JE55_RS02455 717863ab589905b0c38b820890edab53 507 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 501 44.229 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 JE55_RS02455 717863ab589905b0c38b820890edab53 507 PANTHER PTHR10362:SF7 1 494 7.1E-240 T 22-04-2016 JE55_RS02455 717863ab589905b0c38b820890edab53 507 Gene3D G3DSA:1.20.200.10 196 497 1.5E-127 T 22-04-2016 JE55_RS02455 717863ab589905b0c38b820890edab53 507 SUPERFAMILY SSF48557 1 496 9.42E-190 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 JE55_RS02455 717863ab589905b0c38b820890edab53 507 Gene3D G3DSA:1.10.275.10 2 195 4.1E-69 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal JE55_RS13195 2b38e281b4fd56274eaee69dfda3cca7 199 SMART SM00855 2 153 1.0E-7 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS13195 2b38e281b4fd56274eaee69dfda3cca7 199 SUPERFAMILY SSF53254 1 183 1.24E-36 T 22-04-2016 IPR029033 Histidine phosphatase superfamily JE55_RS13195 2b38e281b4fd56274eaee69dfda3cca7 199 PANTHER PTHR23029:SF1 37 182 7.4E-17 T 22-04-2016 JE55_RS13195 2b38e281b4fd56274eaee69dfda3cca7 199 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 178 1.6E-53 T 22-04-2016 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 JE55_RS13195 2b38e281b4fd56274eaee69dfda3cca7 199 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 184 1.6E-34 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS13195 2b38e281b4fd56274eaee69dfda3cca7 199 Gene3D G3DSA:3.40.50.1240 1 184 6.9E-35 T 22-04-2016 IPR029033 Histidine phosphatase superfamily JE55_RS13195 2b38e281b4fd56274eaee69dfda3cca7 199 PANTHER PTHR23029 37 182 7.4E-17 T 22-04-2016 JE55_RS11345 ee3e1d51c2e6819004eed823510d411c 332 Gene3D G3DSA:2.60.200.20 12 83 5.3E-20 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JE55_RS11345 ee3e1d51c2e6819004eed823510d411c 332 SMART SM00240 15 65 2.5E-9 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JE55_RS11345 ee3e1d51c2e6819004eed823510d411c 332 Pfam PF00498 FHA domain 17 82 3.1E-17 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 JE55_RS11345 ee3e1d51c2e6819004eed823510d411c 332 SUPERFAMILY SSF49879 12 84 3.06E-23 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 JE55_RS00550 24fa5736f5e79917efb61c8f9ed1e9ce 344 Pfam PF13177 DNA polymerase III, delta subunit 19 186 4.3E-38 T 22-04-2016 JE55_RS00550 24fa5736f5e79917efb61c8f9ed1e9ce 344 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 222 9.3E-65 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS00550 24fa5736f5e79917efb61c8f9ed1e9ce 344 PANTHER PTHR11669 114 236 2.3E-49 T 22-04-2016 JE55_RS00550 24fa5736f5e79917efb61c8f9ed1e9ce 344 PANTHER PTHR11669 22 84 2.3E-49 T 22-04-2016 JE55_RS00550 24fa5736f5e79917efb61c8f9ed1e9ce 344 PANTHER PTHR11669:SF8 114 236 2.3E-49 T 22-04-2016 JE55_RS00550 24fa5736f5e79917efb61c8f9ed1e9ce 344 PANTHER PTHR11669:SF8 22 84 2.3E-49 T 22-04-2016 JE55_RS00550 24fa5736f5e79917efb61c8f9ed1e9ce 344 Gene3D G3DSA:3.40.50.300 5 189 3.5E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00550 24fa5736f5e79917efb61c8f9ed1e9ce 344 SUPERFAMILY SSF52540 4 80 1.56E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00550 24fa5736f5e79917efb61c8f9ed1e9ce 344 SUPERFAMILY SSF52540 107 227 1.56E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11535 93fcf1c560a52e6cbeed462d899d15b1 507 Gene3D G3DSA:3.40.1020.10 333 506 2.4E-59 T 22-04-2016 JE55_RS11535 93fcf1c560a52e6cbeed462d899d15b1 507 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 JE55_RS11535 93fcf1c560a52e6cbeed462d899d15b1 507 SUPERFAMILY SSF53686 5 360 9.43E-97 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS11535 93fcf1c560a52e6cbeed462d899d15b1 507 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 5 506 2.1E-247 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 JE55_RS11535 93fcf1c560a52e6cbeed462d899d15b1 507 PANTHER PTHR10314:SF30 5 362 5.7E-200 T 22-04-2016 JE55_RS11535 93fcf1c560a52e6cbeed462d899d15b1 507 SUPERFAMILY SSF55021 413 506 5.72E-27 T 22-04-2016 JE55_RS11535 93fcf1c560a52e6cbeed462d899d15b1 507 PANTHER PTHR10314 5 362 5.7E-200 T 22-04-2016 JE55_RS11535 93fcf1c560a52e6cbeed462d899d15b1 507 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 424 506 1.4E-22 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 JE55_RS11535 93fcf1c560a52e6cbeed462d899d15b1 507 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 323 412 6.5E-28 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 JE55_RS11535 93fcf1c560a52e6cbeed462d899d15b1 507 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 310 9.7E-77 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS11535 93fcf1c560a52e6cbeed462d899d15b1 507 Gene3D G3DSA:3.40.50.1100 70 328 2.6E-79 T 22-04-2016 JE55_RS17145 7c5a55d52edb7517c2ae77b932ad24af 1281 PANTHER PTHR23304 18 1278 0.0 T 22-04-2016 JE55_RS17145 7c5a55d52edb7517c2ae77b932ad24af 1281 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 1 1273 0.0 T 22-04-2016 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 JE55_RS17145 7c5a55d52edb7517c2ae77b932ad24af 1281 Pfam PF02514 CobN/Magnesium Chelatase 140 1259 0.0 T 22-04-2016 IPR003672 CobN/magnesium chelatase GO:0009058 JE55_RS17145 7c5a55d52edb7517c2ae77b932ad24af 1281 PANTHER PTHR23304:SF96 18 1278 0.0 T 22-04-2016 JE55_RS12480 1a03a81b2efb8997079387076fe457f3 403 PANTHER PTHR23501 20 395 2.1E-64 T 22-04-2016 JE55_RS12480 1a03a81b2efb8997079387076fe457f3 403 Gene3D G3DSA:1.20.1250.20 25 204 1.3E-21 T 22-04-2016 JE55_RS12480 1a03a81b2efb8997079387076fe457f3 403 SUPERFAMILY SSF103473 18 395 3.53E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS12480 1a03a81b2efb8997079387076fe457f3 403 Pfam PF07690 Major Facilitator Superfamily 30 273 4.5E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS12480 1a03a81b2efb8997079387076fe457f3 403 PANTHER PTHR23501:SF16 20 395 2.1E-64 T 22-04-2016 JE55_RS12480 1a03a81b2efb8997079387076fe457f3 403 Gene3D G3DSA:1.20.1250.20 220 395 3.2E-9 T 22-04-2016 JE55_RS07135 7725c4139a6f2019d102084e16ff5ca6 281 PANTHER PTHR32243:SF31 1 279 4.7E-130 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 JE55_RS07135 7725c4139a6f2019d102084e16ff5ca6 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 276 5.9E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS07135 7725c4139a6f2019d102084e16ff5ca6 281 SUPERFAMILY SSF161098 4 277 1.5E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS07135 7725c4139a6f2019d102084e16ff5ca6 281 PANTHER PTHR32243 1 279 4.7E-130 T 22-04-2016 JE55_RS07135 7725c4139a6f2019d102084e16ff5ca6 281 Gene3D G3DSA:1.10.3720.10 4 270 7.7E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS15965 5f4af4ed9ded65c2069e4edcbe2ec746 454 PANTHER PTHR38731:SF1 99 240 2.3E-15 T 22-04-2016 JE55_RS15965 5f4af4ed9ded65c2069e4edcbe2ec746 454 PANTHER PTHR38731 99 240 2.3E-15 T 22-04-2016 JE55_RS15965 5f4af4ed9ded65c2069e4edcbe2ec746 454 Gene3D G3DSA:3.10.350.10 41 89 6.6E-5 T 22-04-2016 IPR018392 LysM domain JE55_RS15965 5f4af4ed9ded65c2069e4edcbe2ec746 454 Pfam PF04773 FecR protein 131 235 9.1E-19 T 22-04-2016 IPR006860 FecR protein JE55_RS15965 5f4af4ed9ded65c2069e4edcbe2ec746 454 PIRSF PIRSF029644 1 454 8.0E-160 T 22-04-2016 IPR016930 Uncharacterised conserved protein UCP029644, LysM, PA4035 JE55_RS15965 5f4af4ed9ded65c2069e4edcbe2ec746 454 Pfam PF01476 LysM domain 42 88 6.6E-4 T 22-04-2016 IPR018392 LysM domain JE55_RS19395 21e33a310cf9242f9e42c7420b0d2fa5 172 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 95 110 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site JE55_RS19395 21e33a310cf9242f9e42c7420b0d2fa5 172 PANTHER PTHR23389 1 172 5.2E-58 T 22-04-2016 JE55_RS19395 21e33a310cf9242f9e42c7420b0d2fa5 172 SUPERFAMILY SSF56091 2 80 9.21E-21 T 22-04-2016 JE55_RS19395 21e33a310cf9242f9e42c7420b0d2fa5 172 SMART SM00532 1 172 8.5E-15 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 JE55_RS19395 21e33a310cf9242f9e42c7420b0d2fa5 172 SUPERFAMILY SSF50249 82 164 6.68E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS19395 21e33a310cf9242f9e42c7420b0d2fa5 172 Gene3D G3DSA:2.40.50.140 86 154 1.0E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS19395 21e33a310cf9242f9e42c7420b0d2fa5 172 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 1 82 1.7E-22 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 JE55_RS19395 21e33a310cf9242f9e42c7420b0d2fa5 172 Gene3D G3DSA:3.30.1490.70 3 85 4.9E-26 T 22-04-2016 JE55_RS19395 21e33a310cf9242f9e42c7420b0d2fa5 172 PANTHER PTHR23389:SF9 1 172 5.2E-58 T 22-04-2016 JE55_RS19395 21e33a310cf9242f9e42c7420b0d2fa5 172 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 86 162 1.6E-36 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 JE55_RS31720 97d75dc8f0bc95a3b18b09959b6ed351 225 PANTHER PTHR10887:SF351 33 180 7.6E-48 T 22-04-2016 JE55_RS31720 97d75dc8f0bc95a3b18b09959b6ed351 225 PANTHER PTHR10887 33 180 7.6E-48 T 22-04-2016 JE55_RS31720 97d75dc8f0bc95a3b18b09959b6ed351 225 SUPERFAMILY SSF52540 33 190 1.2E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS31720 97d75dc8f0bc95a3b18b09959b6ed351 225 Gene3D G3DSA:3.40.50.300 28 198 1.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS31720 97d75dc8f0bc95a3b18b09959b6ed351 225 Pfam PF13604 AAA domain 38 219 3.8E-32 T 22-04-2016 JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 151 185 1.2E-7 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 272 306 3.5E-5 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 107 137 9.0E-5 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 236 271 2.5E-6 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 Gene3D G3DSA:2.160.10.10 148 315 5.7E-42 T 22-04-2016 JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 Gene3D G3DSA:2.160.10.10 104 147 1.4E-10 T 22-04-2016 JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 23 92 2.2E-22 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 PANTHER PTHR22572:SF117 105 309 1.3E-49 T 22-04-2016 JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 PANTHER PTHR22572 105 309 1.3E-49 T 22-04-2016 JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 SUPERFAMILY SSF51161 31 330 4.79E-79 T 22-04-2016 IPR011004 Trimeric LpxA-like JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 269 297 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 8 340 37.56 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 JE55_RS01145 6781fdff52e39d84dca3496d0ca7b98d 361 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 343 2.2E-110 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 JE55_RS08390 d0696c4a8ac26a1a4812c148ae24be81 364 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 10 352 6.3E-125 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS08390 d0696c4a8ac26a1a4812c148ae24be81 364 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 355 50.148 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS08390 d0696c4a8ac26a1a4812c148ae24be81 364 PANTHER PTHR21091 7 359 1.7E-140 T 22-04-2016 JE55_RS08390 d0696c4a8ac26a1a4812c148ae24be81 364 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 7 354 5.6E-132 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS08390 d0696c4a8ac26a1a4812c148ae24be81 364 Gene3D G3DSA:3.20.20.210 5 358 7.4E-146 T 22-04-2016 JE55_RS08390 d0696c4a8ac26a1a4812c148ae24be81 364 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS08390 d0696c4a8ac26a1a4812c148ae24be81 364 SUPERFAMILY SSF51726 5 356 7.5E-114 T 22-04-2016 JE55_RS08390 d0696c4a8ac26a1a4812c148ae24be81 364 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 148 164 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 JE55_RS08390 d0696c4a8ac26a1a4812c148ae24be81 364 PANTHER PTHR21091:SF2 7 359 1.7E-140 T 22-04-2016 JE55_RS12920 a46ccf3bdf6ab4ff57d51a2e2b3f668f 55 PANTHER PTHR15238 1 55 2.6E-24 T 22-04-2016 JE55_RS12920 a46ccf3bdf6ab4ff57d51a2e2b3f668f 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS12920 a46ccf3bdf6ab4ff57d51a2e2b3f668f 55 SUPERFAMILY SSF57829 1 53 2.5E-20 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 JE55_RS12920 a46ccf3bdf6ab4ff57d51a2e2b3f668f 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.143 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS12920 a46ccf3bdf6ab4ff57d51a2e2b3f668f 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.9E-26 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS12920 a46ccf3bdf6ab4ff57d51a2e2b3f668f 55 Pfam PF00471 Ribosomal protein L33 8 53 6.6E-19 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS09795 9080cbf9e22b221b4a612da8c9090e9e 397 Hamap MF_00416 Flagellar P-ring protein [flgI]. 23 397 37.695 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS09795 9080cbf9e22b221b4a612da8c9090e9e 397 Pfam PF02119 Flagellar P-ring protein 43 396 5.4E-138 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS09795 9080cbf9e22b221b4a612da8c9090e9e 397 PANTHER PTHR30381 3 397 6.7E-189 T 22-04-2016 JE55_RS09795 9080cbf9e22b221b4a612da8c9090e9e 397 PANTHER PTHR30381:SF1 3 397 6.7E-189 T 22-04-2016 JE55_RS09795 9080cbf9e22b221b4a612da8c9090e9e 397 PRINTS PR01010 Flagellar P-ring protein signature 193 211 1.08E-57 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS09795 9080cbf9e22b221b4a612da8c9090e9e 397 PRINTS PR01010 Flagellar P-ring protein signature 136 153 1.08E-57 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS09795 9080cbf9e22b221b4a612da8c9090e9e 397 PRINTS PR01010 Flagellar P-ring protein signature 153 171 1.08E-57 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS09795 9080cbf9e22b221b4a612da8c9090e9e 397 PRINTS PR01010 Flagellar P-ring protein signature 114 133 1.08E-57 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS09795 9080cbf9e22b221b4a612da8c9090e9e 397 PRINTS PR01010 Flagellar P-ring protein signature 284 296 1.08E-57 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS09795 9080cbf9e22b221b4a612da8c9090e9e 397 PRINTS PR01010 Flagellar P-ring protein signature 43 58 1.08E-57 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 PANTHER PTHR30409 1 302 3.2E-148 T 22-04-2016 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 Gene3D G3DSA:3.40.1160.10 1 299 1.6E-94 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 TIGRFAM TIGR00746 arcC: carbamate kinase 1 300 2.1E-127 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 SUPERFAMILY SSF53633 1 299 6.41E-77 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 PIRSF PIRSF000723 1 301 3.1E-108 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 PANTHER PTHR30409:SF1 1 302 3.2E-148 T 22-04-2016 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 Pfam PF00696 Amino acid kinase family 1 282 1.6E-29 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 PRINTS PR01469 Bacterial carbamate kinase signature 103 122 4.5E-68 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 PRINTS PR01469 Bacterial carbamate kinase signature 205 220 4.5E-68 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 4.5E-68 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 PRINTS PR01469 Bacterial carbamate kinase signature 71 89 4.5E-68 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 PRINTS PR01469 Bacterial carbamate kinase signature 256 271 4.5E-68 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 PRINTS PR01469 Bacterial carbamate kinase signature 151 170 4.5E-68 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JE55_RS17270 edd2946f145d775a25a1c73c61d2e279 312 PRINTS PR01469 Bacterial carbamate kinase signature 174 192 4.5E-68 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 JE55_RS05230 afba95ec95c977b7113c7166597b1c94 498 PIRSF PIRSF004919 32 497 1.4E-140 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS05230 afba95ec95c977b7113c7166597b1c94 498 PANTHER PTHR30624 31 498 1.8E-220 T 22-04-2016 JE55_RS05230 afba95ec95c977b7113c7166597b1c94 498 PANTHER PTHR30624:SF4 31 498 1.8E-220 T 22-04-2016 JE55_RS05230 afba95ec95c977b7113c7166597b1c94 498 Pfam PF01523 Putative modulator of DNA gyrase 52 348 5.7E-68 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS05230 afba95ec95c977b7113c7166597b1c94 498 SUPERFAMILY SSF111283 37 496 4.45E-134 T 22-04-2016 JE55_RS16535 bddc34311617211961c6214e09ad9376 501 SUPERFAMILY SSF53649 140 362 7.85E-9 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 JE55_RS16535 bddc34311617211961c6214e09ad9376 501 PANTHER PTHR31956:SF1 3 110 1.0E-98 T 22-04-2016 JE55_RS16535 bddc34311617211961c6214e09ad9376 501 PANTHER PTHR31956 3 110 1.0E-98 T 22-04-2016 JE55_RS16535 bddc34311617211961c6214e09ad9376 501 Pfam PF04185 Phosphoesterase family 8 374 9.0E-65 T 22-04-2016 IPR007312 Phosphoesterase GO:0016788 JE55_RS16535 bddc34311617211961c6214e09ad9376 501 PANTHER PTHR31956 128 398 1.0E-98 T 22-04-2016 JE55_RS16535 bddc34311617211961c6214e09ad9376 501 PANTHER PTHR31956:SF1 128 398 1.0E-98 T 22-04-2016 JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 Gene3D G3DSA:1.20.1250.20 18 199 3.9E-27 T 22-04-2016 JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 Gene3D G3DSA:1.20.1250.20 268 464 4.2E-13 T 22-04-2016 JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 3.3E-10 T 22-04-2016 JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 3.3E-10 T 22-04-2016 JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 207 225 3.3E-10 T 22-04-2016 JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 404 423 3.3E-10 T 22-04-2016 JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 3.3E-10 T 22-04-2016 JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 PANTHER PTHR23501 11 479 1.0E-214 T 22-04-2016 JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 SUPERFAMILY SSF103473 252 468 5.49E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 SUPERFAMILY SSF103473 7 201 5.49E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 Pfam PF07690 Major Facilitator Superfamily 23 413 4.1E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 423 1.3E-78 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 JE55_RS12755 4b4fd828792d620eb62236fa80eca534 479 PANTHER PTHR23501:SF1 11 479 1.0E-214 T 22-04-2016 JE55_RS02000 bcef70e0fc824c6f7af8d73043783c1c 407 SUPERFAMILY SSF51197 25 318 4.26E-78 T 22-04-2016 JE55_RS02000 bcef70e0fc824c6f7af8d73043783c1c 407 SMART SM00558 100 245 3.2E-4 T 22-04-2016 IPR003347 JmjC domain JE55_RS02000 bcef70e0fc824c6f7af8d73043783c1c 407 PANTHER PTHR13096 28 262 6.5E-39 T 22-04-2016 JE55_RS02000 bcef70e0fc824c6f7af8d73043783c1c 407 Pfam PF08007 Cupin superfamily protein 34 340 2.1E-88 T 22-04-2016 IPR003347 JmjC domain JE55_RS02000 bcef70e0fc824c6f7af8d73043783c1c 407 Gene3D G3DSA:2.60.120.650 27 231 1.7E-43 T 22-04-2016 JE55_RS10835 01c82d3bcdb039ba1e308e144fe0faec 236 PIRSF PIRSF037290 4 234 2.6E-82 T 22-04-2016 IPR017166 Uncharacterised conserved protein UCP037290 JE55_RS10835 01c82d3bcdb039ba1e308e144fe0faec 236 SUPERFAMILY SSF52540 48 163 2.02E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10835 01c82d3bcdb039ba1e308e144fe0faec 236 Gene3D G3DSA:3.40.50.300 48 163 1.0E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10835 01c82d3bcdb039ba1e308e144fe0faec 236 PANTHER PTHR35369 31 195 1.0E-24 T 22-04-2016 JE55_RS10835 01c82d3bcdb039ba1e308e144fe0faec 236 PANTHER PTHR35369:SF1 31 195 1.0E-24 T 22-04-2016 JE55_RS31635 8b2797ee3fcd97a2bdda325d068224f8 254 SUPERFAMILY SSF161098 20 155 4.32E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS31635 8b2797ee3fcd97a2bdda325d068224f8 254 PANTHER PTHR30183:SF2 1 254 1.8E-52 T 22-04-2016 JE55_RS31635 8b2797ee3fcd97a2bdda325d068224f8 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 149 2.2E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS31635 8b2797ee3fcd97a2bdda325d068224f8 254 SUPERFAMILY SSF161098 164 244 8.76E-5 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS31635 8b2797ee3fcd97a2bdda325d068224f8 254 PANTHER PTHR30183 1 254 1.8E-52 T 22-04-2016 JE55_RS31635 8b2797ee3fcd97a2bdda325d068224f8 254 Gene3D G3DSA:1.10.3720.10 18 152 3.3E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS04390 26128e188838b5618dd6aa92b92b4b56 307 Pfam PF00535 Glycosyl transferase family 2 75 142 6.4E-6 T 22-04-2016 IPR001173 Glycosyltransferase 2-like JE55_RS04390 26128e188838b5618dd6aa92b92b4b56 307 Gene3D G3DSA:3.90.550.10 82 220 6.8E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04390 26128e188838b5618dd6aa92b92b4b56 307 PANTHER PTHR22916:SF9 19 261 1.4E-15 T 22-04-2016 JE55_RS04390 26128e188838b5618dd6aa92b92b4b56 307 PANTHER PTHR22916 19 261 1.4E-15 T 22-04-2016 JE55_RS04390 26128e188838b5618dd6aa92b92b4b56 307 SUPERFAMILY SSF53448 65 225 6.49E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS00690 f84b8ebce1a6cf079f846b51e4ade045 644 PANTHER PTHR10657 244 531 2.4E-68 T 22-04-2016 JE55_RS00690 f84b8ebce1a6cf079f846b51e4ade045 644 PANTHER PTHR10657 1 172 2.4E-68 T 22-04-2016 JE55_RS00690 f84b8ebce1a6cf079f846b51e4ade045 644 SUPERFAMILY SSF109998 42 170 2.67E-27 T 22-04-2016 IPR027304 Trigger factor/SurA domain JE55_RS00690 f84b8ebce1a6cf079f846b51e4ade045 644 SUPERFAMILY SSF109998 204 245 2.67E-27 T 22-04-2016 IPR027304 Trigger factor/SurA domain JE55_RS00690 f84b8ebce1a6cf079f846b51e4ade045 644 SUPERFAMILY SSF54534 264 374 9.16E-27 T 22-04-2016 JE55_RS00690 f84b8ebce1a6cf079f846b51e4ade045 644 Gene3D G3DSA:3.10.50.40 264 397 4.2E-39 T 22-04-2016 JE55_RS00690 f84b8ebce1a6cf079f846b51e4ade045 644 PANTHER PTHR10657:SF11 244 531 2.4E-68 T 22-04-2016 JE55_RS00690 f84b8ebce1a6cf079f846b51e4ade045 644 PANTHER PTHR10657:SF11 1 172 2.4E-68 T 22-04-2016 JE55_RS00690 f84b8ebce1a6cf079f846b51e4ade045 644 Pfam PF13624 SurA N-terminal domain 1 166 5.1E-44 T 22-04-2016 JE55_RS00690 f84b8ebce1a6cf079f846b51e4ade045 644 Pfam PF13616 PPIC-type PPIASE domain 257 376 5.4E-25 T 22-04-2016 JE55_RS10330 bd19e8e4337b107568a32f0f9d34b20f 256 PANTHER PTHR11002:SF20 8 212 4.7E-105 T 22-04-2016 JE55_RS10330 bd19e8e4337b107568a32f0f9d34b20f 256 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 46 53 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS10330 bd19e8e4337b107568a32f0f9d34b20f 256 Pfam PF00484 Carbonic anhydrase 41 193 3.3E-46 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS10330 bd19e8e4337b107568a32f0f9d34b20f 256 Gene3D G3DSA:3.40.1050.10 3 209 5.1E-71 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS10330 bd19e8e4337b107568a32f0f9d34b20f 256 SMART SM00947 34 197 7.2E-63 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS10330 bd19e8e4337b107568a32f0f9d34b20f 256 PANTHER PTHR11002 8 212 4.7E-105 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS10330 bd19e8e4337b107568a32f0f9d34b20f 256 SUPERFAMILY SSF53056 5 214 3.01E-69 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS06490 d149be453fd9c79cb2760d2ebb6f9de6 242 SUPERFAMILY SSF54423 37 89 6.28E-12 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal JE55_RS06490 d149be453fd9c79cb2760d2ebb6f9de6 242 Pfam PF13098 Thioredoxin-like domain 115 238 5.2E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS06490 d149be453fd9c79cb2760d2ebb6f9de6 242 ProSitePatterns PS00194 Thioredoxin family active site. 123 141 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 JE55_RS06490 d149be453fd9c79cb2760d2ebb6f9de6 242 Pfam PF10411 Disulfide bond isomerase protein N-terminus 33 86 3.9E-18 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal JE55_RS06490 d149be453fd9c79cb2760d2ebb6f9de6 242 Gene3D G3DSA:3.40.30.10 112 239 5.1E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS06490 d149be453fd9c79cb2760d2ebb6f9de6 242 PANTHER PTHR35272 1 238 1.0E-32 T 22-04-2016 JE55_RS06490 d149be453fd9c79cb2760d2ebb6f9de6 242 Gene3D G3DSA:3.10.450.70 30 91 4.6E-17 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal JE55_RS06490 d149be453fd9c79cb2760d2ebb6f9de6 242 SUPERFAMILY SSF52833 86 238 1.95E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS06490 d149be453fd9c79cb2760d2ebb6f9de6 242 PANTHER PTHR35272:SF3 1 238 1.0E-32 T 22-04-2016 JE55_RS12385 5f37296b1b3a5d440d1ea654e2fdf7e2 474 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 313 425 9.7E-27 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JE55_RS12385 5f37296b1b3a5d440d1ea654e2fdf7e2 474 Gene3D G3DSA:3.30.420.40 236 470 9.3E-44 T 22-04-2016 JE55_RS12385 5f37296b1b3a5d440d1ea654e2fdf7e2 474 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 232 3.5E-42 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JE55_RS12385 5f37296b1b3a5d440d1ea654e2fdf7e2 474 PANTHER PTHR10196 3 469 4.0E-105 T 22-04-2016 JE55_RS12385 5f37296b1b3a5d440d1ea654e2fdf7e2 474 PIRSF PIRSF000538 1 472 3.2E-113 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 JE55_RS12385 5f37296b1b3a5d440d1ea654e2fdf7e2 474 Gene3D G3DSA:3.30.420.40 3 232 2.5E-51 T 22-04-2016 JE55_RS12385 5f37296b1b3a5d440d1ea654e2fdf7e2 474 SUPERFAMILY SSF53067 3 234 4.43E-55 T 22-04-2016 JE55_RS12385 5f37296b1b3a5d440d1ea654e2fdf7e2 474 SUPERFAMILY SSF53067 234 469 2.48E-44 T 22-04-2016 JE55_RS15015 26097a2749153e3b258216e8ec0bf585 62 Pfam PF11174 Protein of unknown function (DUF2970) 3 57 2.2E-17 T 22-04-2016 IPR021344 Protein of unknown function DUF2970 JE55_RS13330 1bb8ee35a5d7f93611bdb7f2cd14ee9e 236 SUPERFAMILY SSF49354 22 144 9.94E-22 T 22-04-2016 IPR008962 PapD-like JE55_RS13330 1bb8ee35a5d7f93611bdb7f2cd14ee9e 236 PANTHER PTHR30251 24 227 9.0E-34 T 22-04-2016 JE55_RS13330 1bb8ee35a5d7f93611bdb7f2cd14ee9e 236 PANTHER PTHR30251:SF4 24 227 9.0E-34 T 22-04-2016 JE55_RS13330 1bb8ee35a5d7f93611bdb7f2cd14ee9e 236 Gene3D G3DSA:2.60.40.360 26 144 3.1E-13 T 22-04-2016 IPR008962 PapD-like JE55_RS13330 1bb8ee35a5d7f93611bdb7f2cd14ee9e 236 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 144 1.8E-20 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 JE55_RS13180 4eef4f8827cdd63a7184892193d37155 276 Gene3D G3DSA:3.40.50.300 17 241 4.0E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13180 4eef4f8827cdd63a7184892193d37155 276 PANTHER PTHR24220:SF558 15 257 1.4E-56 T 22-04-2016 JE55_RS13180 4eef4f8827cdd63a7184892193d37155 276 PANTHER PTHR24220 15 257 1.4E-56 T 22-04-2016 JE55_RS13180 4eef4f8827cdd63a7184892193d37155 276 SMART SM00382 38 226 3.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS13180 4eef4f8827cdd63a7184892193d37155 276 SUPERFAMILY SSF52540 17 239 8.25E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13180 4eef4f8827cdd63a7184892193d37155 276 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS13180 4eef4f8827cdd63a7184892193d37155 276 Pfam PF00005 ABC transporter 29 177 1.5E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 34.368 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 PANTHER PTHR21342:SF1 1 160 2.0E-71 T 22-04-2016 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 156 4.9E-55 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 3.8E-45 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 3.8E-45 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 3.8E-45 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 3.8E-45 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 3.8E-45 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 SUPERFAMILY SSF52374 3 156 1.05E-43 T 22-04-2016 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 55 4.2E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 PANTHER PTHR21342 1 160 2.0E-71 T 22-04-2016 JE55_RS11085 b201cecef9142441923859c9e1324d12 166 Gene3D G3DSA:3.40.50.620 2 158 5.2E-52 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS11085 b201cecef9142441923859c9e1324d12 166 Pfam PF01467 Cytidylyltransferase-like 5 133 2.1E-17 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JE55_RS14380 6192d7f7d765bdbd309e9d95e4a4054d 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 9 240 3.3E-60 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 JE55_RS14380 6192d7f7d765bdbd309e9d95e4a4054d 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 169 179 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 JE55_RS14380 6192d7f7d765bdbd309e9d95e4a4054d 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 5 250 38.762 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 JE55_RS14380 6192d7f7d765bdbd309e9d95e4a4054d 251 Pfam PF00121 Triosephosphate isomerase 9 247 7.4E-85 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 JE55_RS14380 6192d7f7d765bdbd309e9d95e4a4054d 251 SUPERFAMILY SSF51351 5 249 2.62E-85 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 JE55_RS14380 6192d7f7d765bdbd309e9d95e4a4054d 251 PANTHER PTHR21139 1 251 2.4E-110 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 JE55_RS14380 6192d7f7d765bdbd309e9d95e4a4054d 251 Gene3D G3DSA:3.20.20.70 7 250 2.6E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS14435 35aa434657c5e708a0a429f3bc7e48bf 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 140 1.8E-44 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 JE55_RS14435 35aa434657c5e708a0a429f3bc7e48bf 162 Gene3D G3DSA:1.10.1060.10 15 128 5.5E-21 T 22-04-2016 JE55_RS14435 35aa434657c5e708a0a429f3bc7e48bf 162 SUPERFAMILY SSF54862 36 145 1.93E-25 T 22-04-2016 JE55_RS14435 35aa434657c5e708a0a429f3bc7e48bf 162 PANTHER PTHR10849:SF20 3 162 1.1E-83 T 22-04-2016 JE55_RS14435 35aa434657c5e708a0a429f3bc7e48bf 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS14435 35aa434657c5e708a0a429f3bc7e48bf 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS14435 35aa434657c5e708a0a429f3bc7e48bf 162 PANTHER PTHR10849 3 162 1.1E-83 T 22-04-2016 JE55_RS14435 35aa434657c5e708a0a429f3bc7e48bf 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 27.808 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 JE55_RS14435 35aa434657c5e708a0a429f3bc7e48bf 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 1.7E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS02945 ac766c3cd3f2f60a0e816777a7877078 111 PIRSF PIRSF030771 1 107 1.8E-10 T 22-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 JE55_RS02945 ac766c3cd3f2f60a0e816777a7877078 111 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 1 107 2.4E-22 T 22-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 1.9E-143 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 Pfam PF01926 50S ribosome-binding GTPase 161 285 5.5E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 Pfam PF01018 GTP1/OBG 3 158 3.0E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 SUPERFAMILY SSF82051 2 158 3.01E-57 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.4E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.4E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.4E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.4E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 PANTHER PTHR11702 1 356 1.4E-163 T 22-04-2016 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 SUPERFAMILY SSF52540 152 335 8.11E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 Gene3D G3DSA:3.40.50.300 156 343 9.6E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.702 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 Gene3D G3DSA:2.70.210.12 2 155 1.9E-58 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 PANTHER PTHR11702:SF3 1 356 1.4E-163 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JE55_RS06105 b7ebe3118e75002b618e7c2899c93833 372 PIRSF PIRSF002401 1 357 3.4E-134 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 JE55_RS10500 ce726f9ff0e3a0fe37f00a8cc07dae82 214 PANTHER PTHR12277 9 210 5.6E-32 T 22-04-2016 JE55_RS10500 ce726f9ff0e3a0fe37f00a8cc07dae82 214 PANTHER PTHR12277:SF79 9 210 5.6E-32 T 22-04-2016 JE55_RS10500 ce726f9ff0e3a0fe37f00a8cc07dae82 214 Gene3D G3DSA:3.40.50.1820 10 210 7.9E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS10500 ce726f9ff0e3a0fe37f00a8cc07dae82 214 Pfam PF12146 Serine aminopeptidase, S33 56 151 1.1E-6 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 JE55_RS10500 ce726f9ff0e3a0fe37f00a8cc07dae82 214 SUPERFAMILY SSF53474 4 207 2.47E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS13820 12e5b64ff928218f5cc39197a97faca4 356 PANTHER PTHR22911 11 321 4.4E-55 T 22-04-2016 JE55_RS13820 12e5b64ff928218f5cc39197a97faca4 356 SUPERFAMILY SSF103481 210 296 2.48E-14 T 22-04-2016 JE55_RS13820 12e5b64ff928218f5cc39197a97faca4 356 Pfam PF00892 EamA-like transporter family 13 146 3.0E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS13820 12e5b64ff928218f5cc39197a97faca4 356 Pfam PF00892 EamA-like transporter family 154 293 2.9E-22 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS13820 12e5b64ff928218f5cc39197a97faca4 356 SUPERFAMILY SSF103481 49 150 2.22E-18 T 22-04-2016 JE55_RS14305 2cbe606bbcd942e61e421c5ee25d9c51 186 Gene3D G3DSA:1.10.10.10 116 180 3.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14305 2cbe606bbcd942e61e421c5ee25d9c51 186 Gene3D G3DSA:1.10.1740.10 7 99 6.6E-7 T 22-04-2016 JE55_RS14305 2cbe606bbcd942e61e421c5ee25d9c51 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 175 4.2E-20 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS14305 2cbe606bbcd942e61e421c5ee25d9c51 186 Pfam PF08281 Sigma-70, region 4 124 171 9.5E-17 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS14305 2cbe606bbcd942e61e421c5ee25d9c51 186 SUPERFAMILY SSF88659 116 176 1.16E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS14305 2cbe606bbcd942e61e421c5ee25d9c51 186 PANTHER PTHR30173 4 181 6.0E-22 T 22-04-2016 JE55_RS14305 2cbe606bbcd942e61e421c5ee25d9c51 186 SUPERFAMILY SSF88946 14 90 5.89E-8 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 JE55_RS09135 b9867b949c15ca4a58396c888e377163 322 SUPERFAMILY SSF46785 8 91 7.92E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09135 b9867b949c15ca4a58396c888e377163 322 Gene3D G3DSA:3.40.190.10 180 263 7.3E-22 T 22-04-2016 JE55_RS09135 b9867b949c15ca4a58396c888e377163 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS09135 b9867b949c15ca4a58396c888e377163 322 SUPERFAMILY SSF53850 91 303 1.1E-44 T 22-04-2016 JE55_RS09135 b9867b949c15ca4a58396c888e377163 322 Gene3D G3DSA:1.10.10.10 7 89 3.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09135 b9867b949c15ca4a58396c888e377163 322 PANTHER PTHR30537 1 317 3.3E-101 T 22-04-2016 JE55_RS09135 b9867b949c15ca4a58396c888e377163 322 Pfam PF03466 LysR substrate binding domain 91 300 7.4E-42 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS09135 b9867b949c15ca4a58396c888e377163 322 Gene3D G3DSA:3.40.190.10 95 179 8.6E-22 T 22-04-2016 JE55_RS09755 28047900dba60601a88b09ccec129d9a 509 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 373 507 1.4E-36 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal JE55_RS09755 28047900dba60601a88b09ccec129d9a 509 SMART SM00858 385 447 1.6E-10 T 22-04-2016 IPR013974 SAF domain JE55_RS09755 28047900dba60601a88b09ccec129d9a 509 Pfam PF13144 Chaperone for flagella basal body P-ring formation 310 507 5.2E-53 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal JE55_RS09755 28047900dba60601a88b09ccec129d9a 509 PANTHER PTHR36307 347 507 1.9E-25 T 22-04-2016 JE55_RS18765 b23b83dd5ea3dfa56224e6b4dfb0d096 70 PANTHER PTHR23309:SF9 2 70 1.7E-21 T 22-04-2016 JE55_RS18765 b23b83dd5ea3dfa56224e6b4dfb0d096 70 Gene3D G3DSA:3.90.226.10 1 66 6.8E-18 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS18765 b23b83dd5ea3dfa56224e6b4dfb0d096 70 PANTHER PTHR23309 2 70 1.7E-21 T 22-04-2016 JE55_RS18765 b23b83dd5ea3dfa56224e6b4dfb0d096 70 SUPERFAMILY SSF52096 2 63 1.32E-18 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS18765 b23b83dd5ea3dfa56224e6b4dfb0d096 70 Pfam PF00378 Enoyl-CoA hydratase/isomerase 3 64 2.1E-13 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 JE55_RS10970 740fc52b80f49f3583b3919abb786bb3 335 Gene3D G3DSA:3.40.50.10490 174 333 2.3E-42 T 22-04-2016 JE55_RS10970 740fc52b80f49f3583b3919abb786bb3 335 Gene3D G3DSA:3.40.50.10490 1 154 9.8E-25 T 22-04-2016 JE55_RS10970 740fc52b80f49f3583b3919abb786bb3 335 PANTHER PTHR10937 1 334 2.4E-112 T 22-04-2016 JE55_RS10970 740fc52b80f49f3583b3919abb786bb3 335 PANTHER PTHR10937:SF8 1 334 2.4E-112 T 22-04-2016 JE55_RS10970 740fc52b80f49f3583b3919abb786bb3 335 Pfam PF01380 SIS domain 38 158 2.9E-12 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS10970 740fc52b80f49f3583b3919abb786bb3 335 Pfam PF01380 SIS domain 192 276 3.5E-15 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS10970 740fc52b80f49f3583b3919abb786bb3 335 SUPERFAMILY SSF53697 1 333 3.59E-65 T 22-04-2016 JE55_RS11705 66c95f88801bf3dbb2d0d7427534cf01 259 Gene3D G3DSA:3.40.1130.10 61 230 2.7E-20 T 22-04-2016 JE55_RS11705 66c95f88801bf3dbb2d0d7427534cf01 259 Pfam PF01553 Acyltransferase 59 184 7.7E-21 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 JE55_RS11705 66c95f88801bf3dbb2d0d7427534cf01 259 PANTHER PTHR10434 1 236 2.3E-54 T 22-04-2016 JE55_RS11705 66c95f88801bf3dbb2d0d7427534cf01 259 SMART SM00563 72 187 1.0E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 JE55_RS11705 66c95f88801bf3dbb2d0d7427534cf01 259 SUPERFAMILY SSF69593 4 241 2.75E-45 T 22-04-2016 JE55_RS11045 5bf616773001510967ec488d7ba040ac 326 Gene3D G3DSA:1.20.970.10 21 79 5.6E-16 T 22-04-2016 JE55_RS11045 5bf616773001510967ec488d7ba040ac 326 Pfam PF02885 Glycosyl transferase family, helical bundle domain 20 79 3.9E-11 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain JE55_RS11045 5bf616773001510967ec488d7ba040ac 326 Gene3D G3DSA:3.40.1030.10 99 322 4.3E-28 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 JE55_RS11045 5bf616773001510967ec488d7ba040ac 326 SUPERFAMILY SSF52418 93 325 2.04E-38 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 JE55_RS11045 5bf616773001510967ec488d7ba040ac 326 SUPERFAMILY SSF47648 21 87 3.79E-14 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 2.3E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 2.3E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 PRINTS PR00474 Glutamate 5-kinase family signature 213 233 2.3E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 2.3E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 2.3E-49 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 Pfam PF00696 Amino acid kinase family 9 238 4.1E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 PANTHER PTHR11063 1 372 9.7E-115 T 22-04-2016 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 PIRSF PIRSF000729 4 372 3.1E-130 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 SUPERFAMILY SSF53633 9 259 9.03E-70 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 SUPERFAMILY SSF88697 281 371 1.24E-23 T 22-04-2016 IPR015947 PUA-like domain JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 211 228 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 PANTHER PTHR11063:SF6 1 372 9.7E-115 T 22-04-2016 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 SMART SM00359 281 364 7.2E-16 T 22-04-2016 IPR002478 PUA domain GO:0003723 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 Gene3D G3DSA:2.30.130.10 278 370 6.8E-27 T 22-04-2016 IPR015947 PUA-like domain JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 Gene3D G3DSA:3.40.1160.10 4 261 7.1E-59 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 Pfam PF01472 PUA domain 281 355 1.1E-21 T 22-04-2016 IPR002478 PUA domain GO:0003723 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 36.295 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 JE55_RS06100 0e52e41a9b84062d29cbba1d977c301d 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 370 4.3E-129 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 JE55_RS17285 9a3f388d88926e70de0f7467fef084ef 486 Pfam PF13520 Amino acid permease 23 426 5.5E-75 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS17285 9a3f388d88926e70de0f7467fef084ef 486 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 14 486 2.2E-193 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 JE55_RS17285 9a3f388d88926e70de0f7467fef084ef 486 PANTHER PTHR11785 18 480 4.4E-238 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS17285 9a3f388d88926e70de0f7467fef084ef 486 PIRSF PIRSF006060 1 462 6.6E-50 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS17285 9a3f388d88926e70de0f7467fef084ef 486 PANTHER PTHR11785:SF77 18 480 4.4E-238 T 22-04-2016 JE55_RS17285 9a3f388d88926e70de0f7467fef084ef 486 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 17 486 1.1E-224 T 22-04-2016 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 Gene3D G3DSA:3.40.190.10 146 313 7.8E-67 T 22-04-2016 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 31 47 4.3E-64 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 74 88 4.3E-64 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 213 232 4.3E-64 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 308 334 4.3E-64 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 4.3E-64 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 153 167 4.3E-64 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 90 103 4.3E-64 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 263 282 4.3E-64 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 176 195 4.3E-64 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 47 68 4.3E-64 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PANTHER PTHR30222 1 364 2.4E-134 T 22-04-2016 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PIRSF PIRSF019574 1 364 1.2E-134 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 Gene3D G3DSA:3.40.190.10 22 145 5.2E-15 T 22-04-2016 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 PANTHER PTHR30222:SF11 1 364 2.4E-134 T 22-04-2016 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 Pfam PF13416 Bacterial extracellular solute-binding protein 43 329 3.7E-32 T 22-04-2016 JE55_RS18190 5036cf0bb0ed11b3ffacb8005f7dfebb 364 SUPERFAMILY SSF53850 25 363 3.59E-97 T 22-04-2016 JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 12 687 1.3E-300 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 SUPERFAMILY SSF51011 598 693 6.69E-11 T 22-04-2016 JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 PANTHER PTHR10357 617 702 1.4E-275 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 PANTHER PTHR10357 1 588 1.4E-275 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 Pfam PF00128 Alpha amylase, catalytic domain 199 282 3.8E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 SUPERFAMILY SSF81296 11 158 3.08E-48 T 22-04-2016 IPR014756 Immunoglobulin E-set JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 Gene3D G3DSA:2.60.40.10 11 162 6.8E-55 T 22-04-2016 IPR013783 Immunoglobulin-like fold JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 PANTHER PTHR10357:SF74 617 702 1.4E-275 T 22-04-2016 JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 PANTHER PTHR10357:SF74 1 588 1.4E-275 T 22-04-2016 JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 104 3.7E-17 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 Gene3D G3DSA:3.20.20.80 163 585 1.9E-107 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 Gene3D G3DSA:2.60.40.1180 598 682 3.5E-10 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 SUPERFAMILY SSF51445 144 478 1.06E-120 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 SUPERFAMILY SSF51445 507 584 1.06E-120 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15455 09c916b4a3906f9ebe758763bbbf173d 702 SMART SM00642 174 577 3.2E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JE55_RS04210 3a0b423f106296789dcb2c5051ab53b2 265 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 78 261 1.4E-55 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 JE55_RS04210 3a0b423f106296789dcb2c5051ab53b2 265 PANTHER PTHR23417:SF14 34 263 4.2E-73 T 22-04-2016 JE55_RS04210 3a0b423f106296789dcb2c5051ab53b2 265 SUPERFAMILY SSF53335 40 262 6.56E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS04210 3a0b423f106296789dcb2c5051ab53b2 265 PANTHER PTHR23417 34 263 4.2E-73 T 22-04-2016 JE55_RS04210 3a0b423f106296789dcb2c5051ab53b2 265 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 50 262 30.025 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 JE55_RS04210 3a0b423f106296789dcb2c5051ab53b2 265 Pfam PF02390 Putative methyltransferase 90 257 6.2E-56 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 JE55_RS04210 3a0b423f106296789dcb2c5051ab53b2 265 Gene3D G3DSA:3.40.50.150 86 222 1.7E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS16845 0b3dd2f667ca1091a14daa3eb5c3cd90 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 142 303 3.9E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16845 0b3dd2f667ca1091a14daa3eb5c3cd90 323 PANTHER PTHR30151 66 319 4.9E-115 T 22-04-2016 JE55_RS16845 0b3dd2f667ca1091a14daa3eb5c3cd90 323 SUPERFAMILY SSF161098 118 303 1.57E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16845 0b3dd2f667ca1091a14daa3eb5c3cd90 323 PANTHER PTHR30151:SF16 66 319 4.9E-115 T 22-04-2016 JE55_RS16845 0b3dd2f667ca1091a14daa3eb5c3cd90 323 Gene3D G3DSA:1.10.3720.10 122 303 2.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS00420 ef52f54b2e8aa6a27717ad3bbb37cebf 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 1.7E-44 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00420 ef52f54b2e8aa6a27717ad3bbb37cebf 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.568 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00420 ef52f54b2e8aa6a27717ad3bbb37cebf 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal JE55_RS00420 ef52f54b2e8aa6a27717ad3bbb37cebf 150 SUPERFAMILY SSF55658 1 56 2.27E-18 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal JE55_RS00420 ef52f54b2e8aa6a27717ad3bbb37cebf 150 SUPERFAMILY SSF55653 59 147 2.35E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal JE55_RS00420 ef52f54b2e8aa6a27717ad3bbb37cebf 150 Gene3D G3DSA:3.40.5.10 1 52 1.6E-24 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal JE55_RS00420 ef52f54b2e8aa6a27717ad3bbb37cebf 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 3.4E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal JE55_RS00420 ef52f54b2e8aa6a27717ad3bbb37cebf 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 7.0E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal JE55_RS00420 ef52f54b2e8aa6a27717ad3bbb37cebf 150 Gene3D G3DSA:3.10.430.100 60 147 3.2E-28 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal JE55_RS00420 ef52f54b2e8aa6a27717ad3bbb37cebf 150 PANTHER PTHR21368 1 146 1.3E-44 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07230 bb195ba1e9337f0540fda7e4f7a585f5 219 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 201 6.6E-64 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 JE55_RS07230 bb195ba1e9337f0540fda7e4f7a585f5 219 Pfam PF01926 50S ribosome-binding GTPase 27 149 3.6E-18 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS07230 bb195ba1e9337f0540fda7e4f7a585f5 219 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 205 25.751 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 JE55_RS07230 bb195ba1e9337f0540fda7e4f7a585f5 219 PANTHER PTHR11649 18 217 3.2E-38 T 22-04-2016 JE55_RS07230 bb195ba1e9337f0540fda7e4f7a585f5 219 Gene3D G3DSA:3.40.50.300 16 205 6.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07230 bb195ba1e9337f0540fda7e4f7a585f5 219 SUPERFAMILY SSF52540 17 205 9.06E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14165 f5fba04a73d23f08f85a84b506713219 130 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 4 123 31.766 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 JE55_RS14165 f5fba04a73d23f08f85a84b506713219 130 Gene3D G3DSA:3.40.50.1380 4 124 2.1E-54 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS14165 f5fba04a73d23f08f85a84b506713219 130 PANTHER PTHR30492 5 124 1.5E-53 T 22-04-2016 JE55_RS14165 f5fba04a73d23f08f85a84b506713219 130 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 5 122 5.1E-49 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 JE55_RS14165 f5fba04a73d23f08f85a84b506713219 130 SUPERFAMILY SSF52335 4 124 2.35E-47 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS14165 f5fba04a73d23f08f85a84b506713219 130 SMART SM00851 17 110 1.9E-26 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS14165 f5fba04a73d23f08f85a84b506713219 130 ProSitePatterns PS01335 Methylglyoxal synthase active site. 57 65 - T 22-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 JE55_RS14165 f5fba04a73d23f08f85a84b506713219 130 Pfam PF02142 MGS-like domain 18 110 3.6E-16 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain JE55_RS14165 f5fba04a73d23f08f85a84b506713219 130 PIRSF PIRSF006614 1 129 5.6E-52 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 JE55_RS10045 e58b36aa089fac14fc8bdb8b8a8d7e57 485 Gene3D G3DSA:1.50.10.10 26 418 5.8E-131 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 JE55_RS10045 e58b36aa089fac14fc8bdb8b8a8d7e57 485 SUPERFAMILY SSF48208 26 421 3.63E-121 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 JE55_RS10045 e58b36aa089fac14fc8bdb8b8a8d7e57 485 PANTHER PTHR15108 18 427 1.0E-77 T 22-04-2016 JE55_RS10045 e58b36aa089fac14fc8bdb8b8a8d7e57 485 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 53 408 1.3E-104 T 22-04-2016 JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 SUPERFAMILY SSF51246 329 399 9.89E-20 T 22-04-2016 IPR011054 Rudiment single hybrid motif JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 Gene3D G3DSA:3.30.470.20 203 398 2.4E-71 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 PANTHER PTHR11609 1 391 1.5E-200 T 22-04-2016 JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 Gene3D G3DSA:3.40.50.20 8 124 3.4E-39 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 PANTHER PTHR11609:SF7 1 391 1.5E-200 T 22-04-2016 JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 Pfam PF01370 NAD dependent epimerase/dehydratase family 22 85 3.5E-6 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 Pfam PF02222 ATP-grasp domain 127 305 4.2E-54 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 17 399 2.5E-177 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 SUPERFAMILY SSF52440 7 116 1.87E-33 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 SUPERFAMILY SSF56059 117 323 2.12E-58 T 22-04-2016 JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 Gene3D G3DSA:3.30.1490.20 127 202 4.7E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS13870 ceb664f77b506d653950c1e5ed4ee380 404 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 11 401 52.281 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 JE55_RS12960 35a3da5453d2fd225519cd57503788cf 257 SMART SM00382 31 249 1.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS12960 35a3da5453d2fd225519cd57503788cf 257 Gene3D G3DSA:3.40.50.300 4 251 1.7E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12960 35a3da5453d2fd225519cd57503788cf 257 SUPERFAMILY SSF52540 6 253 3.59E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12960 35a3da5453d2fd225519cd57503788cf 257 Pfam PF00005 ABC transporter 22 182 5.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS12960 35a3da5453d2fd225519cd57503788cf 257 PANTHER PTHR24220:SF358 129 255 2.8E-114 T 22-04-2016 JE55_RS12960 35a3da5453d2fd225519cd57503788cf 257 PANTHER PTHR24220:SF358 8 113 2.8E-114 T 22-04-2016 JE55_RS12960 35a3da5453d2fd225519cd57503788cf 257 PANTHER PTHR24220 129 255 2.8E-114 T 22-04-2016 JE55_RS12960 35a3da5453d2fd225519cd57503788cf 257 PANTHER PTHR24220 8 113 2.8E-114 T 22-04-2016 JE55_RS12960 35a3da5453d2fd225519cd57503788cf 257 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 231 253 1.7E-11 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JE55_RS13385 c56a4748b1ee486b5e8240a12179a6c7 435 Gene3D G3DSA:1.20.1250.20 21 224 1.0E-44 T 22-04-2016 JE55_RS13385 c56a4748b1ee486b5e8240a12179a6c7 435 PANTHER PTHR11662 9 428 9.2E-156 T 22-04-2016 JE55_RS13385 c56a4748b1ee486b5e8240a12179a6c7 435 PANTHER PTHR11662:SF3 9 428 9.2E-156 T 22-04-2016 JE55_RS13385 c56a4748b1ee486b5e8240a12179a6c7 435 SUPERFAMILY SSF103473 10 430 1.14E-80 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS13385 c56a4748b1ee486b5e8240a12179a6c7 435 Pfam PF07690 Major Facilitator Superfamily 32 394 1.8E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS13385 c56a4748b1ee486b5e8240a12179a6c7 435 Gene3D G3DSA:1.20.1250.20 243 427 4.3E-19 T 22-04-2016 JE55_RS24865 2a9d462661d1e0df2d778fab3430b703 226 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 1.1E-10 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 JE55_RS24865 2a9d462661d1e0df2d778fab3430b703 226 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 196 209 1.1E-10 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 JE55_RS24865 2a9d462661d1e0df2d778fab3430b703 226 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 1.1E-10 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 JE55_RS24865 2a9d462661d1e0df2d778fab3430b703 226 SUPERFAMILY SSF51419 32 225 3.01E-59 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS24865 2a9d462661d1e0df2d778fab3430b703 226 PANTHER PTHR11482 10 226 5.1E-82 T 22-04-2016 JE55_RS24865 2a9d462661d1e0df2d778fab3430b703 226 Gene3D G3DSA:3.20.20.10 42 226 4.4E-62 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS24865 2a9d462661d1e0df2d778fab3430b703 226 PANTHER PTHR11482:SF5 10 226 5.1E-82 T 22-04-2016 JE55_RS24865 2a9d462661d1e0df2d778fab3430b703 226 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 44 224 4.7E-52 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 JE55_RS24865 2a9d462661d1e0df2d778fab3430b703 226 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 5.9E-9 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS24865 2a9d462661d1e0df2d778fab3430b703 226 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 5.9E-9 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS19760 801b882295d22f899b908f045d19c2a8 167 Gene3D G3DSA:3.40.50.980 1 121 9.3E-36 T 22-04-2016 JE55_RS19760 801b882295d22f899b908f045d19c2a8 167 SUPERFAMILY SSF56801 1 165 1.31E-42 T 22-04-2016 JE55_RS19760 801b882295d22f899b908f045d19c2a8 167 ProSitePatterns PS00455 Putative AMP-binding domain signature. 115 126 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS19760 801b882295d22f899b908f045d19c2a8 167 Pfam PF00501 AMP-binding enzyme 1 166 7.2E-35 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS19760 801b882295d22f899b908f045d19c2a8 167 Gene3D G3DSA:3.40.50.980 122 166 7.3E-17 T 22-04-2016 JE55_RS19760 801b882295d22f899b908f045d19c2a8 167 PANTHER PTHR24095 1 166 8.6E-47 T 22-04-2016 JE55_RS06905 f3bd9f2375a69e5eb417bd89a2f77a48 203 Gene3D G3DSA:3.40.30.10 1 90 1.1E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS06905 f3bd9f2375a69e5eb417bd89a2f77a48 203 SUPERFAMILY SSF47616 73 202 5.68E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS06905 f3bd9f2375a69e5eb417bd89a2f77a48 203 PANTHER PTHR11260 1 203 5.9E-62 T 22-04-2016 JE55_RS06905 f3bd9f2375a69e5eb417bd89a2f77a48 203 PANTHER PTHR11260:SF44 1 203 5.9E-62 T 22-04-2016 JE55_RS06905 f3bd9f2375a69e5eb417bd89a2f77a48 203 Pfam PF00043 Glutathione S-transferase, C-terminal domain 116 188 4.1E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal JE55_RS06905 f3bd9f2375a69e5eb417bd89a2f77a48 203 Gene3D G3DSA:1.20.1050.10 91 194 1.4E-17 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS06905 f3bd9f2375a69e5eb417bd89a2f77a48 203 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 77 1.2E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JE55_RS06905 f3bd9f2375a69e5eb417bd89a2f77a48 203 SUPERFAMILY SSF52833 1 101 1.38E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS08820 4c051a634bda8aa81e8ce317364aa79a 1009 Pfam PF04851 Type III restriction enzyme, res subunit 10 254 1.2E-11 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 JE55_RS08820 4c051a634bda8aa81e8ce317364aa79a 1009 SUPERFAMILY SSF52540 91 131 3.88E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08820 4c051a634bda8aa81e8ce317364aa79a 1009 SUPERFAMILY SSF52540 496 569 3.88E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08820 4c051a634bda8aa81e8ce317364aa79a 1009 SUPERFAMILY SSF52540 10 24 2.1E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08820 4c051a634bda8aa81e8ce317364aa79a 1009 SUPERFAMILY SSF52540 90 265 2.1E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08820 4c051a634bda8aa81e8ce317364aa79a 1009 Gene3D G3DSA:3.40.50.300 90 152 2.7E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07825 bda6bbcea1aa150a65691ee468d87f7d 396 Gene3D G3DSA:1.20.1510.10 18 214 2.2E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain JE55_RS07825 bda6bbcea1aa150a65691ee468d87f7d 396 Gene3D G3DSA:3.30.70.1350 216 297 1.5E-24 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain JE55_RS07825 bda6bbcea1aa150a65691ee468d87f7d 396 Pfam PF01545 Cation efflux family 22 214 1.9E-46 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JE55_RS07825 bda6bbcea1aa150a65691ee468d87f7d 396 SUPERFAMILY SSF161111 18 216 2.88E-50 T 22-04-2016 JE55_RS07825 bda6bbcea1aa150a65691ee468d87f7d 396 PANTHER PTHR11562:SF18 21 305 1.4E-83 T 22-04-2016 JE55_RS07825 bda6bbcea1aa150a65691ee468d87f7d 396 Pfam PF16916 Dimerisation domain of Zinc Transporter 220 296 3.0E-21 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain JE55_RS07825 bda6bbcea1aa150a65691ee468d87f7d 396 PANTHER PTHR11562 21 305 1.4E-83 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JE55_RS07825 bda6bbcea1aa150a65691ee468d87f7d 396 SUPERFAMILY SSF160240 219 297 4.45E-20 T 22-04-2016 JE55_RS07825 bda6bbcea1aa150a65691ee468d87f7d 396 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 297 7.8E-67 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 JE55_RS08805 76b3ef7dc2dd663509c943f70f03b33a 225 Gene3D G3DSA:1.10.10.10 125 220 6.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08805 76b3ef7dc2dd663509c943f70f03b33a 225 SMART SM00448 1 112 1.9E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS08805 76b3ef7dc2dd663509c943f70f03b33a 225 SMART SM00862 145 218 2.9E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS08805 76b3ef7dc2dd663509c943f70f03b33a 225 PANTHER PTHR26402:SF518 1 225 1.3E-70 T 22-04-2016 JE55_RS08805 76b3ef7dc2dd663509c943f70f03b33a 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 3.2E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS08805 76b3ef7dc2dd663509c943f70f03b33a 225 SUPERFAMILY SSF52172 1 167 1.71E-40 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS08805 76b3ef7dc2dd663509c943f70f03b33a 225 Gene3D G3DSA:3.40.50.2300 1 122 1.5E-38 T 22-04-2016 JE55_RS08805 76b3ef7dc2dd663509c943f70f03b33a 225 PANTHER PTHR26402 1 225 1.3E-70 T 22-04-2016 JE55_RS08805 76b3ef7dc2dd663509c943f70f03b33a 225 Pfam PF00072 Response regulator receiver domain 4 113 1.3E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS17065 ebb8c30a4f7668a868e5371ed53d3c98 398 PANTHER PTHR30532 111 394 5.4E-44 T 22-04-2016 JE55_RS17065 ebb8c30a4f7668a868e5371ed53d3c98 398 Pfam PF01497 Periplasmic binding protein 118 359 1.8E-18 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 JE55_RS17065 ebb8c30a4f7668a868e5371ed53d3c98 398 Gene3D G3DSA:3.40.50.1980 218 384 4.7E-35 T 22-04-2016 JE55_RS17065 ebb8c30a4f7668a868e5371ed53d3c98 398 SUPERFAMILY SSF53807 112 383 8.24E-49 T 22-04-2016 JE55_RS17065 ebb8c30a4f7668a868e5371ed53d3c98 398 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 135 153 3.1E-6 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein JE55_RS17065 ebb8c30a4f7668a868e5371ed53d3c98 398 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 299 317 3.1E-6 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein JE55_RS17065 ebb8c30a4f7668a868e5371ed53d3c98 398 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 167 182 3.1E-6 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein JE55_RS17065 ebb8c30a4f7668a868e5371ed53d3c98 398 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 366 379 3.1E-6 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein JE55_RS17065 ebb8c30a4f7668a868e5371ed53d3c98 398 Gene3D G3DSA:3.40.50.1980 112 204 9.0E-31 T 22-04-2016 JE55_RS10440 a790361222c54c23748d374c0d7a2af5 161 Gene3D G3DSA:3.40.50.620 26 145 2.4E-33 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS10440 a790361222c54c23748d374c0d7a2af5 161 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 22 157 3.8E-60 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 JE55_RS10440 a790361222c54c23748d374c0d7a2af5 161 SUPERFAMILY SSF52374 25 153 7.51E-22 T 22-04-2016 JE55_RS10440 a790361222c54c23748d374c0d7a2af5 161 PANTHER PTHR10739:SF26 27 159 1.1E-34 T 22-04-2016 JE55_RS10440 a790361222c54c23748d374c0d7a2af5 161 PANTHER PTHR10739 27 159 1.1E-34 T 22-04-2016 JE55_RS10440 a790361222c54c23748d374c0d7a2af5 161 Pfam PF01467 Cytidylyltransferase-like 29 124 5.0E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JE55_RS10440 a790361222c54c23748d374c0d7a2af5 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 93 2.7E-13 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JE55_RS03320 27aa4f3d10b27ef74c04cc79d5e60962 73 PANTHER PTHR32319 7 69 2.2E-16 T 22-04-2016 JE55_RS03320 27aa4f3d10b27ef74c04cc79d5e60962 73 Gene3D G3DSA:3.10.290.10 1 69 9.7E-26 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS03320 27aa4f3d10b27ef74c04cc79d5e60962 73 Pfam PF13275 S4 domain 6 69 3.1E-22 T 22-04-2016 JE55_RS03320 27aa4f3d10b27ef74c04cc79d5e60962 73 PANTHER PTHR32319:SF3 7 69 2.2E-16 T 22-04-2016 JE55_RS03320 27aa4f3d10b27ef74c04cc79d5e60962 73 SUPERFAMILY SSF55174 4 69 1.7E-18 T 22-04-2016 JE55_RS14365 b0aca4dae9c265d19ffaab6af27bb681 89 Gene3D G3DSA:1.10.287.10 5 89 1.2E-39 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 JE55_RS14365 b0aca4dae9c265d19ffaab6af27bb681 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 2.4E-39 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 JE55_RS14365 b0aca4dae9c265d19ffaab6af27bb681 89 Pfam PF00312 Ribosomal protein S15 8 88 7.8E-38 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS14365 b0aca4dae9c265d19ffaab6af27bb681 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS14365 b0aca4dae9c265d19ffaab6af27bb681 89 PANTHER PTHR23321 6 88 9.0E-44 T 22-04-2016 JE55_RS14365 b0aca4dae9c265d19ffaab6af27bb681 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 4.0E-31 T 22-04-2016 JE55_RS14365 b0aca4dae9c265d19ffaab6af27bb681 89 SMART SM01387 8 88 6.0E-54 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS14365 b0aca4dae9c265d19ffaab6af27bb681 89 SUPERFAMILY SSF47060 4 89 1.24E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 JE55_RS14365 b0aca4dae9c265d19ffaab6af27bb681 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.5 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 JE55_RS10220 ef1c58a8be78693b4d149a6ecc625bad 218 SUPERFAMILY SSF52540 53 153 1.27E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10220 ef1c58a8be78693b4d149a6ecc625bad 218 PANTHER PTHR32071 54 173 2.5E-34 T 22-04-2016 JE55_RS10220 ef1c58a8be78693b4d149a6ecc625bad 218 Gene3D G3DSA:1.10.8.60 87 163 5.8E-21 T 22-04-2016 JE55_RS10220 ef1c58a8be78693b4d149a6ecc625bad 218 Gene3D G3DSA:3.40.50.300 54 86 8.1E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS25035 5235b83343652fec4c78b6180d665a1e 524 Pfam PF05000 RNA polymerase Rpb1, domain 4 179 268 2.1E-19 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25035 5235b83343652fec4c78b6180d665a1e 524 SUPERFAMILY SSF64484 2 450 2.17E-132 T 22-04-2016 JE55_RS25035 5235b83343652fec4c78b6180d665a1e 524 PANTHER PTHR19376 475 509 1.9E-168 T 22-04-2016 JE55_RS25035 5235b83343652fec4c78b6180d665a1e 524 PANTHER PTHR19376 75 448 1.9E-168 T 22-04-2016 JE55_RS25035 5235b83343652fec4c78b6180d665a1e 524 Pfam PF04998 RNA polymerase Rpb1, domain 5 271 509 3.1E-53 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS25035 5235b83343652fec4c78b6180d665a1e 524 PANTHER PTHR19376:SF32 475 509 1.9E-168 T 22-04-2016 JE55_RS25035 5235b83343652fec4c78b6180d665a1e 524 PANTHER PTHR19376:SF32 1 51 1.9E-168 T 22-04-2016 JE55_RS25035 5235b83343652fec4c78b6180d665a1e 524 PANTHER PTHR19376:SF32 75 448 1.9E-168 T 22-04-2016 JE55_RS25035 5235b83343652fec4c78b6180d665a1e 524 PANTHER PTHR19376 1 51 1.9E-168 T 22-04-2016 JE55_RS25035 5235b83343652fec4c78b6180d665a1e 524 Pfam PF04983 RNA polymerase Rpb1, domain 3 2 149 7.2E-16 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 Gene3D G3DSA:1.10.10.10 1 80 4.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.9E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 Gene3D G3DSA:3.40.190.10 89 175 1.0E-24 T 22-04-2016 JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 Pfam PF03466 LysR substrate binding domain 87 291 6.3E-28 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 SUPERFAMILY SSF46785 2 109 2.54E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 PANTHER PTHR30346:SF0 1 291 5.0E-66 T 22-04-2016 JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 PANTHER PTHR30346 1 291 5.0E-66 T 22-04-2016 JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 SUPERFAMILY SSF53850 89 291 3.8E-30 T 22-04-2016 JE55_RS15725 5d2ab22c520865c5563c2e39b42bcd94 297 Gene3D G3DSA:3.40.190.10 176 264 8.3E-21 T 22-04-2016 JE55_RS04905 55c1779a94c9f187f2aadc147f963661 386 SUPERFAMILY SSF53756 27 379 1.03E-54 T 22-04-2016 JE55_RS04905 55c1779a94c9f187f2aadc147f963661 386 Pfam PF13439 Glycosyltransferase Family 4 43 197 3.9E-14 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JE55_RS04905 55c1779a94c9f187f2aadc147f963661 386 Gene3D G3DSA:3.40.50.2000 212 358 2.5E-16 T 22-04-2016 JE55_RS04905 55c1779a94c9f187f2aadc147f963661 386 PANTHER PTHR12526 14 380 1.3E-38 T 22-04-2016 JE55_RS04905 55c1779a94c9f187f2aadc147f963661 386 Pfam PF00534 Glycosyl transferases group 1 212 359 3.0E-19 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS11985 a6233edbb0b0f61c8ca22a76fe139617 225 SUPERFAMILY SSF53474 2 214 4.61E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS11985 a6233edbb0b0f61c8ca22a76fe139617 225 Gene3D G3DSA:3.40.50.1820 1 213 3.2E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS11985 a6233edbb0b0f61c8ca22a76fe139617 225 Pfam PF01738 Dienelactone hydrolase family 16 195 6.5E-7 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 JE55_RS11765 413d7edec3fbfca546be5024406d45ae 390 PANTHER PTHR23501 1 380 6.8E-166 T 22-04-2016 JE55_RS11765 413d7edec3fbfca546be5024406d45ae 390 PANTHER PTHR23501:SF4 1 380 6.8E-166 T 22-04-2016 JE55_RS11765 413d7edec3fbfca546be5024406d45ae 390 Gene3D G3DSA:1.20.1250.20 5 190 1.5E-26 T 22-04-2016 JE55_RS11765 413d7edec3fbfca546be5024406d45ae 390 Pfam PF07690 Major Facilitator Superfamily 8 337 6.8E-38 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS11765 413d7edec3fbfca546be5024406d45ae 390 SUPERFAMILY SSF103473 4 376 7.06E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS11765 413d7edec3fbfca546be5024406d45ae 390 Gene3D G3DSA:1.20.1250.20 192 375 1.3E-14 T 22-04-2016 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 192 335 3.7E-23 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PANTHER PTHR11405 31 340 1.9E-123 T 22-04-2016 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 39 183 1.2E-36 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 Gene3D G3DSA:3.40.50.1370 183 318 2.3E-49 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 85 92 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 39 338 2.8E-90 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 85 104 4.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 304 327 4.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 171 182 4.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 292 301 4.9E-19 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PANTHER PTHR11405:SF16 31 340 1.9E-123 T 22-04-2016 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 SUPERFAMILY SSF53671 38 340 1.7E-93 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 38 341 41.018 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 75 97 2.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 255 264 2.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 320 334 2.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 113 122 2.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 296 301 2.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 PRINTS PR00101 Aspartate carbamoyltransferase signature 170 187 2.6E-28 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 JE55_RS04450 66195e6154c4268d8663a5943a863196 343 Gene3D G3DSA:3.40.50.1370 39 182 4.7E-50 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 JE55_RS02520 99312569e641ef22abace852b1334c08 70 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 24 56 1.2E-8 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 JE55_RS19485 cf3a556b8228e793f56fef7eb6a1caac 377 SUPERFAMILY SSF103473 3 353 2.75E-23 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS19485 cf3a556b8228e793f56fef7eb6a1caac 377 Pfam PF07690 Major Facilitator Superfamily 7 354 7.0E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS19485 cf3a556b8228e793f56fef7eb6a1caac 377 Gene3D G3DSA:1.20.1250.20 5 192 1.1E-12 T 22-04-2016 JE55_RS19485 cf3a556b8228e793f56fef7eb6a1caac 377 PANTHER PTHR23513 326 377 1.6E-66 T 22-04-2016 JE55_RS19485 cf3a556b8228e793f56fef7eb6a1caac 377 PANTHER PTHR23513:SF8 1 307 1.6E-66 T 22-04-2016 JE55_RS19485 cf3a556b8228e793f56fef7eb6a1caac 377 PANTHER PTHR23513:SF8 326 377 1.6E-66 T 22-04-2016 JE55_RS19485 cf3a556b8228e793f56fef7eb6a1caac 377 PANTHER PTHR23513 1 307 1.6E-66 T 22-04-2016 JE55_RS10085 e8ddc453614ae6240a688ee0cd164fb7 319 PANTHER PTHR32332 2 315 6.5E-152 T 22-04-2016 JE55_RS10085 e8ddc453614ae6240a688ee0cd164fb7 319 PANTHER PTHR32332:SF21 2 315 6.5E-152 T 22-04-2016 JE55_RS10085 e8ddc453614ae6240a688ee0cd164fb7 319 Pfam PF03060 Nitronate monooxygenase 12 305 9.6E-26 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JE55_RS10085 e8ddc453614ae6240a688ee0cd164fb7 319 Gene3D G3DSA:3.20.20.70 9 301 2.7E-50 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS10085 e8ddc453614ae6240a688ee0cd164fb7 319 SUPERFAMILY SSF51412 8 287 4.03E-60 T 22-04-2016 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 175 1.5E-71 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 Gene3D G3DSA:3.90.930.12 82 176 2.5E-41 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 153 161 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 Gene3D G3DSA:3.90.930.12 2 81 1.5E-22 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 SUPERFAMILY SSF56053 1 81 2.88E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 PIRSF PIRSF002162 5 176 3.1E-43 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 175 36.309 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 PANTHER PTHR11655:SF14 1 175 2.4E-82 T 22-04-2016 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 PANTHER PTHR11655 1 175 2.4E-82 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 PRINTS PR00059 Ribosomal protein L6 signature 140 161 5.3E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 PRINTS PR00059 Ribosomal protein L6 signature 70 95 5.3E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 PRINTS PR00059 Ribosomal protein L6 signature 98 114 5.3E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 SUPERFAMILY SSF56053 82 176 4.58E-37 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 Pfam PF00347 Ribosomal protein L6 89 163 4.9E-21 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS07310 32c1869c5300b18e1e6774740c9c5498 176 Pfam PF00347 Ribosomal protein L6 13 81 8.4E-12 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 JE55_RS03425 f52c46fc828ae346b85cdfa4e391b09f 201 Hamap MF_00045 Oligoribonuclease [orn]. 15 193 43.022 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 JE55_RS03425 f52c46fc828ae346b85cdfa4e391b09f 201 PANTHER PTHR11046 14 191 7.4E-104 T 22-04-2016 JE55_RS03425 f52c46fc828ae346b85cdfa4e391b09f 201 Gene3D G3DSA:3.30.420.10 17 190 6.5E-72 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS03425 f52c46fc828ae346b85cdfa4e391b09f 201 Pfam PF00929 Exonuclease 21 182 6.9E-32 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III JE55_RS03425 f52c46fc828ae346b85cdfa4e391b09f 201 SMART SM00479 19 192 7.4E-26 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III JE55_RS03425 f52c46fc828ae346b85cdfa4e391b09f 201 PANTHER PTHR11046:SF1 14 191 7.4E-104 T 22-04-2016 JE55_RS03425 f52c46fc828ae346b85cdfa4e391b09f 201 SUPERFAMILY SSF53098 16 191 5.32E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PANTHER PTHR10906 19 448 1.4E-214 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 22-04-2016 IPR030659 SecY conserved site JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 SUPERFAMILY SSF103491 13 426 9.55E-131 T 22-04-2016 IPR023201 SecY subunit domain JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 Pfam PF00344 SecY translocase 77 419 2.2E-116 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PIRSF PIRSF004557 11 442 5.5E-124 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 ProSitePatterns PS00755 Protein secY signature 1. 77 96 - T 22-04-2016 IPR030659 SecY conserved site JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 117 140 2.9E-93 T 22-04-2016 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 2.9E-93 T 22-04-2016 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 2.9E-93 T 22-04-2016 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 404 422 2.9E-93 T 22-04-2016 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 76 96 2.9E-93 T 22-04-2016 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 317 339 2.9E-93 T 22-04-2016 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 24 42 2.9E-93 T 22-04-2016 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 2.9E-93 T 22-04-2016 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 372 390 2.9E-93 T 22-04-2016 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 Gene3D G3DSA:1.10.3370.10 15 439 1.9E-166 T 22-04-2016 IPR023201 SecY subunit domain JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 Hamap MF_01465 Protein translocase subunit SecY [secY]. 11 435 29.205 T 22-04-2016 IPR026593 Protein translocase subunit SecY JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 PANTHER PTHR10906:SF2 19 448 1.4E-214 T 22-04-2016 JE55_RS07285 9dce7e3e9df9bbb1ad5e1287ab6483cf 448 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 21 431 7.5E-129 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 JE55_RS01640 5468eb43c3dddd9d368ce71bd3008ed2 610 PANTHER PTHR22835 9 421 6.9E-15 T 22-04-2016 JE55_RS01640 5468eb43c3dddd9d368ce71bd3008ed2 610 SUPERFAMILY SSF52266 25 295 8.49E-16 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS01640 5468eb43c3dddd9d368ce71bd3008ed2 610 PANTHER PTHR22835:SF222 9 421 6.9E-15 T 22-04-2016 JE55_RS01640 5468eb43c3dddd9d368ce71bd3008ed2 610 SMART SM00869 337 599 1.9E-19 T 22-04-2016 IPR005546 Autotransporter beta-domain JE55_RS01640 5468eb43c3dddd9d368ce71bd3008ed2 610 Pfam PF03797 Autotransporter beta-domain 337 549 1.4E-22 T 22-04-2016 IPR005546 Autotransporter beta-domain JE55_RS01640 5468eb43c3dddd9d368ce71bd3008ed2 610 Gene3D G3DSA:3.40.50.1110 14 299 6.1E-39 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS01640 5468eb43c3dddd9d368ce71bd3008ed2 610 SUPERFAMILY SSF103515 333 593 4.05E-29 T 22-04-2016 IPR005546 Autotransporter beta-domain JE55_RS01640 5468eb43c3dddd9d368ce71bd3008ed2 610 Gene3D G3DSA:2.40.128.130 337 597 3.3E-34 T 22-04-2016 IPR005546 Autotransporter beta-domain JE55_RS01640 5468eb43c3dddd9d368ce71bd3008ed2 610 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 28 244 1.1E-7 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS00345 467c26fec66a8fe6cc3f2f7ae7ee1165 412 PANTHER PTHR11751 9 409 1.0E-164 T 22-04-2016 JE55_RS00345 467c26fec66a8fe6cc3f2f7ae7ee1165 412 Pfam PF00155 Aminotransferase class I and II 35 391 1.5E-48 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS00345 467c26fec66a8fe6cc3f2f7ae7ee1165 412 Gene3D G3DSA:3.90.1150.10 287 408 1.5E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS00345 467c26fec66a8fe6cc3f2f7ae7ee1165 412 Gene3D G3DSA:3.40.640.10 50 286 2.7E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS00345 467c26fec66a8fe6cc3f2f7ae7ee1165 412 PANTHER PTHR11751:SF303 9 409 1.0E-164 T 22-04-2016 JE55_RS00345 467c26fec66a8fe6cc3f2f7ae7ee1165 412 SUPERFAMILY SSF53383 6 404 2.53E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS06170 7337e96366ad41dd1d480d3be4b336f5 96 PANTHER PTHR33755:SF7 1 96 1.6E-28 T 22-04-2016 JE55_RS06170 7337e96366ad41dd1d480d3be4b336f5 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 94 4.7E-19 T 22-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family JE55_RS06170 7337e96366ad41dd1d480d3be4b336f5 96 PANTHER PTHR33755 1 96 1.6E-28 T 22-04-2016 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 1 518 72.924 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 Gene3D G3DSA:1.20.5.570 486 518 3.4E-18 T 22-04-2016 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 285 1.2E-78 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 309 486 5.7E-75 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 SUPERFAMILY SSF143968 354 518 2.88E-66 T 22-04-2016 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 Gene3D G3DSA:3.40.1670.10 368 485 1.4E-52 T 22-04-2016 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 PANTHER PTHR30108:SF1 309 518 2.6E-235 T 22-04-2016 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 PANTHER PTHR30108:SF1 1 285 2.6E-235 T 22-04-2016 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 PANTHER PTHR30108 309 518 2.6E-235 T 22-04-2016 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 PANTHER PTHR30108 1 285 2.6E-235 T 22-04-2016 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 SUPERFAMILY SSF50475 3 353 1.26E-114 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS04145 d03a5577ce8d80d5d757d3234c79ad90 519 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 462 3.6E-165 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 JE55_RS13325 7cc8433d1a02dda074e7a4abf30549ec 766 Pfam PF13953 PapC C-terminal domain 688 747 7.5E-9 T 22-04-2016 IPR025949 PapC-like, C-terminal domain JE55_RS13325 7cc8433d1a02dda074e7a4abf30549ec 766 PANTHER PTHR30451:SF5 20 765 1.4E-147 T 22-04-2016 JE55_RS13325 7cc8433d1a02dda074e7a4abf30549ec 766 Pfam PF00577 Outer membrane usher protein 462 678 2.5E-20 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 JE55_RS13325 7cc8433d1a02dda074e7a4abf30549ec 766 Pfam PF00577 Outer membrane usher protein 200 399 6.6E-8 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 JE55_RS13325 7cc8433d1a02dda074e7a4abf30549ec 766 PANTHER PTHR30451 20 765 1.4E-147 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 Gene3D G3DSA:3.40.50.20 1 129 7.1E-52 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.2E-37 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 SUPERFAMILY SSF56059 83 348 4.6E-70 T 22-04-2016 JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 Gene3D G3DSA:3.30.1490.20 130 203 5.6E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 8.9E-81 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 Gene3D G3DSA:3.30.470.20 204 444 2.7E-95 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.7E-45 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 SUPERFAMILY SSF52440 1 113 4.03E-48 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 SMART SM00878 336 441 8.6E-63 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 PANTHER PTHR18866 1 450 3.6E-284 T 22-04-2016 JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 SUPERFAMILY SSF51246 331 444 1.2E-42 T 22-04-2016 IPR011054 Rudiment single hybrid motif JE55_RS06010 ac1cb0d75ce10c26d40837063ddc0b47 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.6E-222 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 JE55_RS13435 feeb21a1655f6c602243bfd113d4a3c6 259 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS13435 feeb21a1655f6c602243bfd113d4a3c6 259 SUPERFAMILY SSF52540 9 253 3.63E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13435 feeb21a1655f6c602243bfd113d4a3c6 259 Gene3D G3DSA:3.40.50.300 8 254 6.9E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13435 feeb21a1655f6c602243bfd113d4a3c6 259 Pfam PF00005 ABC transporter 23 183 2.8E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS13435 feeb21a1655f6c602243bfd113d4a3c6 259 PANTHER PTHR24220 9 259 4.5E-165 T 22-04-2016 JE55_RS13435 feeb21a1655f6c602243bfd113d4a3c6 259 PIRSF PIRSF039085 4 259 1.2E-119 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 JE55_RS13435 feeb21a1655f6c602243bfd113d4a3c6 259 SMART SM00382 32 231 3.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS13435 feeb21a1655f6c602243bfd113d4a3c6 259 PANTHER PTHR24220:SF347 9 259 4.5E-165 T 22-04-2016 JE55_RS11725 af6d6fdae3cf8ad8c9481896dec168f1 568 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 78 512 3.2E-94 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 JE55_RS11725 af6d6fdae3cf8ad8c9481896dec168f1 568 PANTHER PTHR38686 243 568 2.5E-75 T 22-04-2016 JE55_RS11725 af6d6fdae3cf8ad8c9481896dec168f1 568 PANTHER PTHR38686 15 220 2.5E-75 T 22-04-2016 JE55_RS11725 af6d6fdae3cf8ad8c9481896dec168f1 568 Pfam PF00795 Carbon-nitrogen hydrolase 272 536 1.3E-21 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS11725 af6d6fdae3cf8ad8c9481896dec168f1 568 Gene3D G3DSA:3.60.110.10 275 529 1.3E-20 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS11725 af6d6fdae3cf8ad8c9481896dec168f1 568 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 23 550 20.978 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 JE55_RS11725 af6d6fdae3cf8ad8c9481896dec168f1 568 SUPERFAMILY SSF56317 273 540 1.57E-33 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS10110 02bb77d79bdcd45c03d134c43d1b83db 168 SUPERFAMILY SSF55826 16 162 9.68E-34 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JE55_RS10110 02bb77d79bdcd45c03d134c43d1b83db 168 Gene3D G3DSA:3.90.960.10 12 164 5.8E-45 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JE55_RS10110 02bb77d79bdcd45c03d134c43d1b83db 168 PANTHER PTHR30411:SF1 7 167 3.2E-25 T 22-04-2016 JE55_RS10110 02bb77d79bdcd45c03d134c43d1b83db 168 Pfam PF04073 Aminoacyl-tRNA editing domain 36 153 6.0E-25 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 JE55_RS10110 02bb77d79bdcd45c03d134c43d1b83db 168 PANTHER PTHR30411 7 167 3.2E-25 T 22-04-2016 JE55_RS08030 53acad548c121920174aee3f01ae5301 104 Pfam PF05400 Flagellar protein FliT 23 98 2.0E-7 T 22-04-2016 IPR008622 Flagellar protein FliT JE55_RS04280 c6d7731252039c97b26f2ccaf9850c1d 291 PANTHER PTHR33643 1 289 7.9E-39 T 22-04-2016 JE55_RS04280 c6d7731252039c97b26f2ccaf9850c1d 291 Pfam PF01774 UreD urease accessory protein 62 264 1.9E-45 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 JE55_RS04280 c6d7731252039c97b26f2ccaf9850c1d 291 Hamap MF_01384 Urease accessory protein UreD [ureD]. 18 275 28.914 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 JE55_RS04280 c6d7731252039c97b26f2ccaf9850c1d 291 PANTHER PTHR33643:SF1 1 289 7.9E-39 T 22-04-2016 JE55_RS03285 6557fa2ecc6672d7e0ab619d8e6b8d15 399 PIRSF PIRSF000484 1 390 5.9E-66 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 JE55_RS03285 6557fa2ecc6672d7e0ab619d8e6b8d15 399 PANTHER PTHR11098:SF16 2 389 3.5E-188 T 22-04-2016 JE55_RS03285 6557fa2ecc6672d7e0ab619d8e6b8d15 399 Gene3D G3DSA:3.20.140.10 1 373 2.3E-146 T 22-04-2016 JE55_RS03285 6557fa2ecc6672d7e0ab619d8e6b8d15 399 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 2 388 2.2E-143 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 JE55_RS03285 6557fa2ecc6672d7e0ab619d8e6b8d15 399 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 1 391 46.746 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 JE55_RS03285 6557fa2ecc6672d7e0ab619d8e6b8d15 399 SUPERFAMILY SSF51690 118 388 7.26E-90 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 JE55_RS03285 6557fa2ecc6672d7e0ab619d8e6b8d15 399 SUPERFAMILY SSF54675 1 136 1.77E-43 T 22-04-2016 JE55_RS03285 6557fa2ecc6672d7e0ab619d8e6b8d15 399 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 164 389 1.3E-74 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 JE55_RS03285 6557fa2ecc6672d7e0ab619d8e6b8d15 399 PANTHER PTHR11098 2 389 3.5E-188 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 JE55_RS09400 255f4e6ebf20a945061788214527e24e 180 Gene3D G3DSA:1.10.10.60 126 179 2.3E-26 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS09400 255f4e6ebf20a945061788214527e24e 180 PANTHER PTHR26402:SF344 4 171 3.3E-40 T 22-04-2016 JE55_RS09400 255f4e6ebf20a945061788214527e24e 180 PANTHER PTHR26402 4 171 3.3E-40 T 22-04-2016 JE55_RS09400 255f4e6ebf20a945061788214527e24e 180 SUPERFAMILY SSF52172 1 165 2.13E-29 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS09400 255f4e6ebf20a945061788214527e24e 180 Gene3D G3DSA:3.40.50.2300 6 125 6.4E-28 T 22-04-2016 JE55_RS09400 255f4e6ebf20a945061788214527e24e 180 Pfam PF00072 Response regulator receiver domain 7 115 2.0E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS09400 255f4e6ebf20a945061788214527e24e 180 SMART SM00448 4 115 2.3E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS09400 255f4e6ebf20a945061788214527e24e 180 Pfam PF02954 Bacterial regulatory protein, Fis family 136 175 1.9E-10 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS16140 4eda631e010f54a64c31631384b4d144 240 PANTHER PTHR24322 12 131 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16140 4eda631e010f54a64c31631384b4d144 240 PANTHER PTHR24322 147 176 3.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16140 4eda631e010f54a64c31631384b4d144 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 5.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16140 4eda631e010f54a64c31631384b4d144 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 5.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16140 4eda631e010f54a64c31631384b4d144 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 5.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16140 4eda631e010f54a64c31631384b4d144 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 5.0E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS16140 4eda631e010f54a64c31631384b4d144 240 PANTHER PTHR24322:SF551 12 131 3.4E-22 T 22-04-2016 JE55_RS16140 4eda631e010f54a64c31631384b4d144 240 PANTHER PTHR24322:SF551 147 176 3.4E-22 T 22-04-2016 JE55_RS16140 4eda631e010f54a64c31631384b4d144 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 236 4.8E-36 T 22-04-2016 JE55_RS16140 4eda631e010f54a64c31631384b4d144 240 SUPERFAMILY SSF51735 4 239 2.25E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS16140 4eda631e010f54a64c31631384b4d144 240 Gene3D G3DSA:3.40.50.720 2 236 2.5E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS06315 24eca67ba3b4ab63e320ba36b5c84120 389 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 387 23.606 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS06315 24eca67ba3b4ab63e320ba36b5c84120 389 PANTHER PTHR22926:SF5 2 152 8.6E-160 T 22-04-2016 JE55_RS06315 24eca67ba3b4ab63e320ba36b5c84120 389 PANTHER PTHR22926:SF5 175 389 8.6E-160 T 22-04-2016 JE55_RS06315 24eca67ba3b4ab63e320ba36b5c84120 389 Pfam PF00953 Glycosyl transferase family 4 99 307 6.5E-33 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS06315 24eca67ba3b4ab63e320ba36b5c84120 389 PANTHER PTHR22926 2 152 8.6E-160 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS06315 24eca67ba3b4ab63e320ba36b5c84120 389 PANTHER PTHR22926 175 389 8.6E-160 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS06315 24eca67ba3b4ab63e320ba36b5c84120 389 ProSitePatterns PS01348 MraY family signature 2. 212 223 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS06315 24eca67ba3b4ab63e320ba36b5c84120 389 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 389 2.6E-120 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS06315 24eca67ba3b4ab63e320ba36b5c84120 389 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS06315 24eca67ba3b4ab63e320ba36b5c84120 389 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 3.8E-6 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS12780 9d9c2f8118344174191e1801c11b0f46 281 SUPERFAMILY SSF51430 8 273 1.19E-75 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain JE55_RS12780 9d9c2f8118344174191e1801c11b0f46 281 PANTHER PTHR11732:SF98 4 273 3.1E-104 T 22-04-2016 JE55_RS12780 9d9c2f8118344174191e1801c11b0f46 281 PRINTS PR00069 Aldo-keto reductase signature 99 117 1.5E-12 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JE55_RS12780 9d9c2f8118344174191e1801c11b0f46 281 PRINTS PR00069 Aldo-keto reductase signature 203 227 1.5E-12 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JE55_RS12780 9d9c2f8118344174191e1801c11b0f46 281 PRINTS PR00069 Aldo-keto reductase signature 43 67 1.5E-12 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JE55_RS12780 9d9c2f8118344174191e1801c11b0f46 281 PRINTS PR00069 Aldo-keto reductase signature 129 146 1.5E-12 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 JE55_RS12780 9d9c2f8118344174191e1801c11b0f46 281 PANTHER PTHR11732 4 273 3.1E-104 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta JE55_RS12780 9d9c2f8118344174191e1801c11b0f46 281 Pfam PF00248 Aldo/keto reductase family 18 267 2.3E-49 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain JE55_RS12780 9d9c2f8118344174191e1801c11b0f46 281 Gene3D G3DSA:3.20.20.100 12 274 3.8E-71 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain JE55_RS07725 e11d3a5221ba1752336c267ebf0350cc 161 ProDom PD095314 PLASMID MEMBRANE MLL6193 PRECURSOR TRANSMEMBRANE Y4JG SIGNAL 12 152 8.0E-24 T 22-04-2016 IPR020232 Uncharacterised protein family, Y4jG, transmembrane JE55_RS07725 e11d3a5221ba1752336c267ebf0350cc 161 SUPERFAMILY SSF102712 38 113 5.62E-6 T 22-04-2016 JE55_RS07725 e11d3a5221ba1752336c267ebf0350cc 161 Pfam PF14464 Prokaryotic homologs of the JAB domain 29 124 6.4E-8 T 22-04-2016 IPR028090 JAB domain, prokaryotic JE55_RS04190 13eade63bba70807589aaacfc1da2f5e 242 Gene3D G3DSA:3.40.50.150 15 219 6.2E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS04190 13eade63bba70807589aaacfc1da2f5e 242 PANTHER PTHR10108 5 220 6.9E-61 T 22-04-2016 JE55_RS04190 13eade63bba70807589aaacfc1da2f5e 242 Pfam PF08241 Methyltransferase domain 47 141 1.1E-20 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 JE55_RS04190 13eade63bba70807589aaacfc1da2f5e 242 PANTHER PTHR10108:SF865 5 220 6.9E-61 T 22-04-2016 JE55_RS04190 13eade63bba70807589aaacfc1da2f5e 242 SUPERFAMILY SSF53335 5 236 8.9E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS02205 914cb5ba4f5791455407ecf3c567995e 363 SUPERFAMILY SSF56601 108 345 4.14E-60 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS02205 914cb5ba4f5791455407ecf3c567995e 363 SUPERFAMILY SSF56601 13 35 4.14E-60 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS02205 914cb5ba4f5791455407ecf3c567995e 363 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 106 328 8.1E-58 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 JE55_RS02205 914cb5ba4f5791455407ecf3c567995e 363 Gene3D G3DSA:3.40.710.10 103 345 1.4E-69 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS02205 914cb5ba4f5791455407ecf3c567995e 363 PANTHER PTHR21581:SF8 101 345 2.1E-98 T 22-04-2016 JE55_RS02205 914cb5ba4f5791455407ecf3c567995e 363 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 136 147 2.0E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JE55_RS02205 914cb5ba4f5791455407ecf3c567995e 363 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 186 203 2.0E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JE55_RS02205 914cb5ba4f5791455407ecf3c567995e 363 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 213 226 2.0E-13 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JE55_RS02205 914cb5ba4f5791455407ecf3c567995e 363 PANTHER PTHR21581 101 345 2.1E-98 T 22-04-2016 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 Gene3D G3DSA:1.20.200.10 531 810 2.8E-57 T 22-04-2016 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 Pfam PF14698 Argininosuccinate lyase C-terminal 791 830 1.6E-5 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 PRINTS PR00145 Argininosuccinate lyase family signature 617 633 7.3E-23 T 22-04-2016 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 PRINTS PR00145 Argininosuccinate lyase family signature 525 547 7.3E-23 T 22-04-2016 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 PRINTS PR00145 Argininosuccinate lyase family signature 655 679 7.3E-23 T 22-04-2016 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 PRINTS PR00145 Argininosuccinate lyase family signature 566 586 7.3E-23 T 22-04-2016 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 PRINTS PR00145 Argininosuccinate lyase family signature 699 715 7.3E-23 T 22-04-2016 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 Gene3D G3DSA:3.30.470.20 100 397 1.4E-30 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 SUPERFAMILY SSF56059 99 313 4.95E-36 T 22-04-2016 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 Pfam PF00206 Lyase 512 720 1.0E-35 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 PANTHER PTHR11444:SF3 508 829 3.6E-66 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 Pfam PF13535 ATP-grasp domain 150 288 1.0E-18 T 22-04-2016 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 PANTHER PTHR11444 508 829 3.6E-66 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 SUPERFAMILY SSF48557 454 833 1.88E-74 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 PRINTS PR00149 Fumarate lyase superfamily signature 699 715 4.6E-12 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 PRINTS PR00149 Fumarate lyase superfamily signature 655 682 4.6E-12 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS01520 df248478ed60ec8cf55281ad1ae4bac8 903 PRINTS PR00149 Fumarate lyase superfamily signature 526 544 4.6E-12 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 Pfam PF00230 Major intrinsic protein 5 225 6.0E-47 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 PRINTS PR00783 Major intrinsic protein family signature 82 101 1.4E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 PRINTS PR00783 Major intrinsic protein family signature 45 69 1.4E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 PRINTS PR00783 Major intrinsic protein family signature 5 24 1.4E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 PRINTS PR00783 Major intrinsic protein family signature 169 191 1.4E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 PRINTS PR00783 Major intrinsic protein family signature 208 228 1.4E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 PRINTS PR00783 Major intrinsic protein family signature 139 157 1.4E-50 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 ProSitePatterns PS00221 MIP family signature. 63 71 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 Hamap MF_01146 Aquaporin Z [aqpZ]. 4 232 34.112 T 22-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 PANTHER PTHR19139:SF103 5 234 6.0E-72 T 22-04-2016 JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 TIGRFAM TIGR00861 MIP: MIP family channel proteins 9 225 5.0E-58 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 SUPERFAMILY SSF81338 5 230 5.36E-67 T 22-04-2016 IPR023271 Aquaporin-like JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 Gene3D G3DSA:1.20.1080.10 3 230 6.7E-68 T 22-04-2016 IPR023271 Aquaporin-like JE55_RS07995 5e34ae8cfde5380d4035b7a31d4429e7 234 PANTHER PTHR19139 5 234 6.0E-72 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 Gene3D G3DSA:3.30.9.10 186 292 5.6E-12 T 22-04-2016 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 Gene3D G3DSA:3.30.9.10 347 376 5.6E-12 T 22-04-2016 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 Gene3D G3DSA:3.50.50.60 297 336 1.9E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 Gene3D G3DSA:3.50.50.60 28 185 1.9E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 SUPERFAMILY SSF51905 286 398 4.1E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 SUPERFAMILY SSF51905 26 195 4.1E-63 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 PANTHER PTHR13789:SF219 1 442 4.4E-185 T 22-04-2016 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 Pfam PF01494 FAD binding domain 27 364 5.9E-64 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 26 48 4.5E-35 T 22-04-2016 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 314 330 4.5E-35 T 22-04-2016 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 332 350 4.5E-35 T 22-04-2016 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 174 189 4.5E-35 T 22-04-2016 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 314 4.5E-35 T 22-04-2016 JE55_RS04730 0752d8005e668a80c2d0d3a1dd6f0d5f 553 PANTHER PTHR13789 1 442 4.4E-185 T 22-04-2016 JE55_RS06605 0358b785a76d864d454cb05610bae6b9 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 40.483 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 JE55_RS06605 0358b785a76d864d454cb05610bae6b9 360 Gene3D G3DSA:1.20.58.410 8 92 5.1E-14 T 22-04-2016 JE55_RS06605 0358b785a76d864d454cb05610bae6b9 360 Gene3D G3DSA:3.30.160.20 214 289 5.7E-36 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain JE55_RS06605 0358b785a76d864d454cb05610bae6b9 360 PANTHER PTHR11075 1 356 1.5E-163 T 22-04-2016 JE55_RS06605 0358b785a76d864d454cb05610bae6b9 360 Pfam PF00472 RF-1 domain 214 321 1.6E-42 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JE55_RS06605 0358b785a76d864d454cb05610bae6b9 360 SUPERFAMILY SSF75620 12 353 1.2E-134 T 22-04-2016 JE55_RS06605 0358b785a76d864d454cb05610bae6b9 360 PANTHER PTHR11075:SF9 1 356 1.5E-163 T 22-04-2016 JE55_RS06605 0358b785a76d864d454cb05610bae6b9 360 SMART SM00937 63 178 5.9E-62 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 JE55_RS06605 0358b785a76d864d454cb05610bae6b9 360 Pfam PF03462 PCRF domain 13 203 8.1E-70 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 JE55_RS06605 0358b785a76d864d454cb05610bae6b9 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 356 4.2E-162 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 JE55_RS06605 0358b785a76d864d454cb05610bae6b9 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JE55_RS03510 009522de99ba34c374ca6ffcf9c69e48 311 Gene3D G3DSA:3.40.50.1220 185 310 2.9E-60 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS03510 009522de99ba34c374ca6ffcf9c69e48 311 Gene3D G3DSA:3.40.50.620 1 182 1.4E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS03510 009522de99ba34c374ca6ffcf9c69e48 311 SUPERFAMILY SSF52467 189 309 1.31E-46 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS03510 009522de99ba34c374ca6ffcf9c69e48 311 SUPERFAMILY SSF52402 3 185 3.42E-58 T 22-04-2016 JE55_RS03510 009522de99ba34c374ca6ffcf9c69e48 311 Pfam PF01012 Electron transfer flavoprotein domain 4 171 1.7E-40 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 JE55_RS03510 009522de99ba34c374ca6ffcf9c69e48 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 22-04-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site JE55_RS03510 009522de99ba34c374ca6ffcf9c69e48 311 PANTHER PTHR10909 104 309 3.2E-119 T 22-04-2016 JE55_RS03510 009522de99ba34c374ca6ffcf9c69e48 311 PANTHER PTHR10909:SF294 104 309 3.2E-119 T 22-04-2016 JE55_RS03510 009522de99ba34c374ca6ffcf9c69e48 311 PIRSF PIRSF000089 1 311 2.0E-105 T 22-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 JE55_RS03510 009522de99ba34c374ca6ffcf9c69e48 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 6.6E-35 T 22-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal JE55_RS03510 009522de99ba34c374ca6ffcf9c69e48 311 SMART SM00893 3 182 4.7E-58 T 22-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 JE55_RS04015 98b8bf25e2189f57cb40b0a491d82352 245 Pfam PF01713 Smr domain 162 242 2.7E-25 T 22-04-2016 IPR002625 Smr domain JE55_RS04015 98b8bf25e2189f57cb40b0a491d82352 245 SUPERFAMILY SSF160443 160 242 1.7E-18 T 22-04-2016 IPR002625 Smr domain JE55_RS04015 98b8bf25e2189f57cb40b0a491d82352 245 PANTHER PTHR35562 59 243 6.6E-42 T 22-04-2016 JE55_RS04015 98b8bf25e2189f57cb40b0a491d82352 245 SMART SM00463 159 243 3.8E-14 T 22-04-2016 IPR002625 Smr domain JE55_RS00175 c20ffdab4e70c5c2c815700a08c7a781 232 PANTHER PTHR23291:SF37 21 230 1.5E-43 T 22-04-2016 JE55_RS00175 c20ffdab4e70c5c2c815700a08c7a781 232 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 22 224 1.8E-42 T 22-04-2016 JE55_RS00175 c20ffdab4e70c5c2c815700a08c7a781 232 PANTHER PTHR23291 21 230 1.5E-43 T 22-04-2016 IPR006214 Bax inhibitor 1-related JE55_RS05605 3f3571e07b089c10803e182d19a564f2 232 SUPERFAMILY SSF52833 1 84 2.43E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS05605 3f3571e07b089c10803e182d19a564f2 232 SUPERFAMILY SSF47616 78 206 7.5E-33 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS05605 3f3571e07b089c10803e182d19a564f2 232 PANTHER PTHR11260:SF285 1 211 2.7E-59 T 22-04-2016 JE55_RS05605 3f3571e07b089c10803e182d19a564f2 232 Gene3D G3DSA:1.20.1050.10 85 199 5.8E-44 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS05605 3f3571e07b089c10803e182d19a564f2 232 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 80 7.0E-15 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JE55_RS05605 3f3571e07b089c10803e182d19a564f2 232 PANTHER PTHR11260 1 211 2.7E-59 T 22-04-2016 JE55_RS05605 3f3571e07b089c10803e182d19a564f2 232 Gene3D G3DSA:3.40.30.10 1 84 1.4E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS05605 3f3571e07b089c10803e182d19a564f2 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 134 197 2.0E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal JE55_RS08010 85db34125547e4d22bac893a5886d090 202 PANTHER PTHR30037 6 198 3.7E-104 T 22-04-2016 JE55_RS08010 85db34125547e4d22bac893a5886d090 202 Gene3D G3DSA:1.10.340.30 6 184 1.9E-80 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 JE55_RS08010 85db34125547e4d22bac893a5886d090 202 SUPERFAMILY SSF48150 6 187 1.26E-74 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 JE55_RS08010 85db34125547e4d22bac893a5886d090 202 Pfam PF03352 Methyladenine glycosylase 12 183 2.3E-75 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 JE55_RS08010 85db34125547e4d22bac893a5886d090 202 PANTHER PTHR30037:SF4 6 198 3.7E-104 T 22-04-2016 JE55_RS03180 cf69548c4e428507a0d0dd7ebd6ce727 310 PIRSF PIRSF000446 1 309 7.4E-110 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 JE55_RS03180 cf69548c4e428507a0d0dd7ebd6ce727 310 PANTHER PTHR10982 1 306 6.4E-138 T 22-04-2016 JE55_RS03180 cf69548c4e428507a0d0dd7ebd6ce727 310 Gene3D G3DSA:3.40.366.10 2 120 1.1E-68 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 JE55_RS03180 cf69548c4e428507a0d0dd7ebd6ce727 310 Gene3D G3DSA:3.40.366.10 195 288 1.1E-68 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 JE55_RS03180 cf69548c4e428507a0d0dd7ebd6ce727 310 Gene3D G3DSA:3.30.70.250 123 194 7.0E-31 T 22-04-2016 JE55_RS03180 cf69548c4e428507a0d0dd7ebd6ce727 310 SUPERFAMILY SSF52151 3 120 1.7E-78 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 JE55_RS03180 cf69548c4e428507a0d0dd7ebd6ce727 310 SUPERFAMILY SSF52151 188 308 1.7E-78 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 JE55_RS03180 cf69548c4e428507a0d0dd7ebd6ce727 310 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 1 289 4.7E-107 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 JE55_RS03180 cf69548c4e428507a0d0dd7ebd6ce727 310 Pfam PF00698 Acyl transferase domain 5 275 1.8E-31 T 22-04-2016 IPR014043 Acyl transferase JE55_RS03180 cf69548c4e428507a0d0dd7ebd6ce727 310 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 298 2.1E-36 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain JE55_RS03180 cf69548c4e428507a0d0dd7ebd6ce727 310 SUPERFAMILY SSF55048 128 195 5.75E-17 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 Pfam PF02839 Carbohydrate binding domain 367 404 8.1E-12 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 Pfam PF02839 Carbohydrate binding domain 412 450 4.2E-12 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 Pfam PF00704 Glycosyl hydrolases family 18 91 307 1.5E-9 T 22-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 SUPERFAMILY SSF51055 410 451 1.44E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 Gene3D G3DSA:3.20.20.80 59 309 5.5E-11 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 PANTHER PTHR11177 6 307 2.9E-67 T 22-04-2016 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 SMART SM00495 411 453 4.6E-12 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 SMART SM00495 365 407 1.5E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 SUPERFAMILY SSF51445 32 314 3.16E-27 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 PANTHER PTHR11177:SF203 6 307 2.9E-67 T 22-04-2016 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 Gene3D G3DSA:2.10.10.20 366 408 2.2E-17 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 Gene3D G3DSA:2.10.10.20 410 451 6.8E-17 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JE55_RS17175 973def10e49dfe83a60cd0e293981a93 453 SUPERFAMILY SSF51055 366 408 4.58E-14 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 JE55_RS08545 0648d6696c9a19d7bbed01ff744048e9 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.5E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS08545 0648d6696c9a19d7bbed01ff744048e9 299 SUPERFAMILY SSF53850 88 297 8.55E-29 T 22-04-2016 JE55_RS08545 0648d6696c9a19d7bbed01ff744048e9 299 PANTHER PTHR30126 1 299 9.4E-55 T 22-04-2016 JE55_RS08545 0648d6696c9a19d7bbed01ff744048e9 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS08545 0648d6696c9a19d7bbed01ff744048e9 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS08545 0648d6696c9a19d7bbed01ff744048e9 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS08545 0648d6696c9a19d7bbed01ff744048e9 299 Gene3D G3DSA:3.40.190.10 83 198 2.0E-16 T 22-04-2016 JE55_RS08545 0648d6696c9a19d7bbed01ff744048e9 299 Pfam PF03466 LysR substrate binding domain 87 297 1.1E-27 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS08545 0648d6696c9a19d7bbed01ff744048e9 299 Gene3D G3DSA:1.10.10.10 1 82 3.9E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08545 0648d6696c9a19d7bbed01ff744048e9 299 Gene3D G3DSA:3.40.190.10 199 263 1.2E-10 T 22-04-2016 JE55_RS08545 0648d6696c9a19d7bbed01ff744048e9 299 SUPERFAMILY SSF46785 1 87 7.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 PANTHER PTHR30480:SF5 485 699 3.5E-120 T 22-04-2016 JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 PANTHER PTHR30480:SF5 45 469 3.5E-120 T 22-04-2016 JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 457 699 1.1E-8 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 PANTHER PTHR30480 485 699 3.5E-120 T 22-04-2016 JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 PANTHER PTHR30480 45 469 3.5E-120 T 22-04-2016 JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 Gene3D G3DSA:3.20.20.300 66 428 6.7E-96 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 59 417 9.7E-83 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 SUPERFAMILY SSF51445 42 456 4.95E-88 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 331 348 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 Gene3D G3DSA:3.40.50.1700 443 697 8.9E-18 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 SUPERFAMILY SSF52279 457 531 1.44E-7 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 JE55_RS15810 90e13da23f2d7b7657465d4ed5ee1f68 699 SUPERFAMILY SSF52279 580 699 1.44E-7 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 SUPERFAMILY SSF55781 514 661 2.75E-8 T 22-04-2016 IPR029016 GAF domain-like JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 Gene3D G3DSA:1.10.287.130 673 744 1.2E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 PANTHER PTHR24423 611 916 2.6E-140 T 22-04-2016 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 PANTHER PTHR24423 13 197 2.6E-140 T 22-04-2016 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 SUPERFAMILY SSF52402 251 367 1.12E-7 T 22-04-2016 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 Gene3D G3DSA:3.30.450.40 513 660 4.9E-9 T 22-04-2016 IPR029016 GAF domain-like JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 PANTHER PTHR24423:SF562 611 916 2.6E-140 T 22-04-2016 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 PANTHER PTHR24423:SF562 13 197 2.6E-140 T 22-04-2016 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 SUPERFAMILY SSF47384 671 749 1.73E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 Pfam PF00512 His Kinase A (phospho-acceptor) domain 678 748 1.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 Gene3D G3DSA:1.20.120.620 406 508 1.7E-38 T 22-04-2016 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 794 910 1.5E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 SUPERFAMILY SSF55874 738 911 4.71E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 895 908 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 833 847 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 851 861 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 PRINTS PR00344 Bacterial sensor protein C-terminal signature 866 884 1.9E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 Gene3D G3DSA:3.30.565.10 750 915 7.3E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 Gene3D G3DSA:3.40.50.300 20 229 5.5E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 Gene3D G3DSA:3.40.50.620 245 365 8.1E-7 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 Pfam PF13493 Domain of unknown function (DUF4118) 410 516 2.5E-30 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 SMART SM00388 677 748 6.2E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 Pfam PF13492 GAF domain 536 658 4.6E-13 T 22-04-2016 IPR003018 GAF domain GO:0005515 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 2.6E-98 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 JE55_RS14200 b9953d10f83e7e6e1d53ab116eada873 993 SMART SM00387 792 911 9.0E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS09430 b4f36cd092f5cc8f280421bf27c4577d 310 Gene3D G3DSA:1.10.150.130 8 100 4.6E-19 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal JE55_RS09430 b4f36cd092f5cc8f280421bf27c4577d 310 Pfam PF00589 Phage integrase family 113 292 6.1E-36 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS09430 b4f36cd092f5cc8f280421bf27c4577d 310 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 306 33.447 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD JE55_RS09430 b4f36cd092f5cc8f280421bf27c4577d 310 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 85 1.9E-15 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 JE55_RS09430 b4f36cd092f5cc8f280421bf27c4577d 310 SUPERFAMILY SSF56349 11 299 4.71E-51 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS09430 b4f36cd092f5cc8f280421bf27c4577d 310 Gene3D G3DSA:1.10.443.10 112 300 1.0E-51 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS09430 b4f36cd092f5cc8f280421bf27c4577d 310 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 12 308 8.1E-107 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 JE55_RS09430 b4f36cd092f5cc8f280421bf27c4577d 310 PANTHER PTHR30349:SF17 13 310 4.2E-104 T 22-04-2016 JE55_RS09430 b4f36cd092f5cc8f280421bf27c4577d 310 PANTHER PTHR30349 13 310 4.2E-104 T 22-04-2016 JE55_RS13415 c1d1626ae61a8f3840041eef3a8ce958 392 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 18 388 1.6E-153 T 22-04-2016 IPR007434 Peptidogalycan biosysnthesis/recognition JE55_RS13415 c1d1626ae61a8f3840041eef3a8ce958 392 Gene3D G3DSA:3.40.630.30 181 339 2.4E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS13415 c1d1626ae61a8f3840041eef3a8ce958 392 PANTHER PTHR31384 58 323 6.8E-56 T 22-04-2016 JE55_RS13415 c1d1626ae61a8f3840041eef3a8ce958 392 SUPERFAMILY SSF55729 195 369 3.9E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS13020 2789cdaebe78af9553be453986230da8 298 Gene3D G3DSA:3.40.50.1820 6 295 4.3E-52 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS13020 2789cdaebe78af9553be453986230da8 298 SUPERFAMILY SSF53474 6 295 2.2E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS13020 2789cdaebe78af9553be453986230da8 298 PANTHER PTHR10992 134 295 1.2E-41 T 22-04-2016 JE55_RS13020 2789cdaebe78af9553be453986230da8 298 PANTHER PTHR10992 7 115 1.2E-41 T 22-04-2016 JE55_RS13020 2789cdaebe78af9553be453986230da8 298 PANTHER PTHR10992:SF764 134 295 1.2E-41 T 22-04-2016 JE55_RS13020 2789cdaebe78af9553be453986230da8 298 PANTHER PTHR10992:SF764 7 115 1.2E-41 T 22-04-2016 JE55_RS13020 2789cdaebe78af9553be453986230da8 298 PRINTS PR00412 Epoxide hydrolase signature 99 112 8.6E-16 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS13020 2789cdaebe78af9553be453986230da8 298 PRINTS PR00412 Epoxide hydrolase signature 51 66 8.6E-16 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS13020 2789cdaebe78af9553be453986230da8 298 PRINTS PR00412 Epoxide hydrolase signature 236 252 8.6E-16 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS13020 2789cdaebe78af9553be453986230da8 298 PRINTS PR00412 Epoxide hydrolase signature 270 292 8.6E-16 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS13020 2789cdaebe78af9553be453986230da8 298 PRINTS PR00412 Epoxide hydrolase signature 31 49 8.6E-16 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS13020 2789cdaebe78af9553be453986230da8 298 Pfam PF00561 alpha/beta hydrolase fold 28 278 2.0E-16 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 Gene3D G3DSA:1.20.1640.10 102 301 3.0E-27 T 22-04-2016 JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 SUPERFAMILY SSF82866 73 293 2.49E-38 T 22-04-2016 JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 Pfam PF07549 SecD/SecF GG Motif 32 59 6.3E-10 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 294 29.165 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 PANTHER PTHR30081 7 314 3.3E-71 T 22-04-2016 JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 Pfam PF02355 Protein export membrane protein 107 291 2.7E-63 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 95 280 3.9E-50 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 2.1E-74 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 PRINTS PR01755 Bacterial translocase SecF protein signature 199 217 1.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 1.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 1.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JE55_RS05410 d9e2c372d5c208fc638400b2bc806055 316 PRINTS PR01755 Bacterial translocase SecF protein signature 151 165 1.4E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JE55_RS02825 e4ffa98da92afbd3065599a22d61423f 288 PANTHER PTHR13903 1 288 8.4E-163 T 22-04-2016 IPR012093 Pirin JE55_RS02825 e4ffa98da92afbd3065599a22d61423f 288 Gene3D G3DSA:2.60.120.10 8 257 7.3E-79 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS02825 e4ffa98da92afbd3065599a22d61423f 288 PANTHER PTHR13903:SF12 1 288 8.4E-163 T 22-04-2016 JE55_RS02825 e4ffa98da92afbd3065599a22d61423f 288 Pfam PF05726 Pirin C-terminal cupin domain 182 284 1.5E-25 T 22-04-2016 IPR008778 Pirin, C-terminal domain JE55_RS02825 e4ffa98da92afbd3065599a22d61423f 288 Pfam PF02678 Pirin 22 127 1.6E-32 T 22-04-2016 IPR003829 Pirin, N-terminal domain JE55_RS02825 e4ffa98da92afbd3065599a22d61423f 288 PIRSF PIRSF006232 2 288 6.2E-90 T 22-04-2016 IPR012093 Pirin JE55_RS02825 e4ffa98da92afbd3065599a22d61423f 288 SUPERFAMILY SSF51182 1 286 6.94E-84 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS11245 c8ef769172aabb8146497da04e71f112 243 SUPERFAMILY SSF53474 2 234 1.61E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS11245 c8ef769172aabb8146497da04e71f112 243 Pfam PF01738 Dienelactone hydrolase family 18 233 3.5E-42 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 JE55_RS11245 c8ef769172aabb8146497da04e71f112 243 PANTHER PTHR22946 1 238 4.7E-50 T 22-04-2016 JE55_RS11245 c8ef769172aabb8146497da04e71f112 243 Gene3D G3DSA:3.40.50.1820 2 232 2.0E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17785 3404d833eadf2498e30d44fdb71d685a 323 PANTHER PTHR33420 179 323 9.8E-26 T 22-04-2016 JE55_RS17785 3404d833eadf2498e30d44fdb71d685a 323 Gene3D G3DSA:2.60.40.1090 186 323 1.7E-30 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 JE55_RS17785 3404d833eadf2498e30d44fdb71d685a 323 Pfam PF00419 Fimbrial protein 180 323 2.6E-16 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 JE55_RS17785 3404d833eadf2498e30d44fdb71d685a 323 SUPERFAMILY SSF49401 184 323 1.04E-26 T 22-04-2016 IPR008966 Adhesion domain JE55_RS07735 a536dbaa067d0db0e315c62bd5e63f7b 193 SUPERFAMILY SSF88723 9 124 8.5E-5 T 22-04-2016 IPR029060 PIN domain-like JE55_RS07735 a536dbaa067d0db0e315c62bd5e63f7b 193 Pfam PF13470 PIN domain 10 116 8.2E-11 T 22-04-2016 IPR002716 PIN domain JE55_RS09000 f33d6c31b9f72e39956e53951f522371 89 PANTHER PTHR33383 1 88 9.0E-40 T 22-04-2016 JE55_RS09000 f33d6c31b9f72e39956e53951f522371 89 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 9.0E-25 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor JE55_RS09000 f33d6c31b9f72e39956e53951f522371 89 Pfam PF01809 Haemolytic domain 3 68 8.0E-27 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor JE55_RS09000 f33d6c31b9f72e39956e53951f522371 89 SMART SM01234 1 68 1.5E-40 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor JE55_RS09000 f33d6c31b9f72e39956e53951f522371 89 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 23.62 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor JE55_RS09000 f33d6c31b9f72e39956e53951f522371 89 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 73 9.7E-25 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 Pfam PF00005 ABC transporter 20 162 1.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 Gene3D G3DSA:2.40.50.100 240 286 6.7E-8 T 22-04-2016 JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 Gene3D G3DSA:2.40.50.100 345 358 6.7E-8 T 22-04-2016 JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 Pfam PF08402 TOBE domain 282 351 9.3E-7 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 SUPERFAMILY SSF52540 4 243 4.38E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 Gene3D G3DSA:2.40.50.140 287 344 4.6E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 SUPERFAMILY SSF50331 237 358 3.64E-25 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 Gene3D G3DSA:3.40.50.300 3 235 9.9E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 PANTHER PTHR24220 5 250 2.9E-155 T 22-04-2016 JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 PANTHER PTHR24220:SF151 5 250 2.9E-155 T 22-04-2016 JE55_RS07130 fbe097fc5588ec0ed842050885a2d2c1 360 SMART SM00382 29 213 4.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS09190 d05216762aabd12d3cb0efb5430595e5 338 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 320 8.2E-15 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 JE55_RS09190 d05216762aabd12d3cb0efb5430595e5 338 SUPERFAMILY SSF51735 106 296 4.96E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS09190 d05216762aabd12d3cb0efb5430595e5 338 SUPERFAMILY SSF52283 1 136 4.25E-21 T 22-04-2016 JE55_RS09190 d05216762aabd12d3cb0efb5430595e5 338 PANTHER PTHR10996 1 317 1.5E-94 T 22-04-2016 JE55_RS09190 d05216762aabd12d3cb0efb5430595e5 338 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 296 1.9E-48 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JE55_RS09190 d05216762aabd12d3cb0efb5430595e5 338 Gene3D G3DSA:3.40.50.720 1 113 6.1E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS09190 d05216762aabd12d3cb0efb5430595e5 338 PANTHER PTHR10996:SF127 1 317 1.5E-94 T 22-04-2016 JE55_RS09190 d05216762aabd12d3cb0efb5430595e5 338 Gene3D G3DSA:3.40.50.720 114 297 1.2E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 PRINTS PR00607 Class IE cytochrome C signature 231 242 8.3E-13 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 PRINTS PR00607 Class IE cytochrome C signature 284 295 8.3E-13 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 PRINTS PR00607 Class IE cytochrome C signature 242 252 8.3E-13 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 PRINTS PR00607 Class IE cytochrome C signature 270 282 8.3E-13 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 Gene3D G3DSA:1.10.760.10 77 156 1.8E-30 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 Gene3D G3DSA:1.10.760.10 220 296 2.0E-31 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 77 153 8.9E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 221 294 9.1E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 PANTHER PTHR40942 177 299 3.9E-24 T 22-04-2016 JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 PANTHER PTHR40942:SF1 177 299 3.9E-24 T 22-04-2016 JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 SUPERFAMILY SSF46626 77 156 1.69E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS08190 526be1d1a3a51a55af4917f2d110a01e 299 SUPERFAMILY SSF46626 221 296 4.05E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12195 8dbdf893113ea5c0fe629920f9fba384 189 SUPERFAMILY SSF54523 23 171 2.93E-21 T 22-04-2016 JE55_RS12195 8dbdf893113ea5c0fe629920f9fba384 189 Pfam PF13633 Prokaryotic N-terminal methylation site 21 46 4.4E-11 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS12195 8dbdf893113ea5c0fe629920f9fba384 189 PANTHER PTHR30093 7 69 1.7E-12 T 22-04-2016 JE55_RS12195 8dbdf893113ea5c0fe629920f9fba384 189 Pfam PF00114 Pilin (bacterial filament) 51 188 1.1E-13 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 JE55_RS12195 8dbdf893113ea5c0fe629920f9fba384 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 21 43 1.2E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS12195 8dbdf893113ea5c0fe629920f9fba384 189 Gene3D G3DSA:3.30.700.10 23 188 5.8E-31 T 22-04-2016 JE55_RS10920 cebaa2fa3807a7cc2eb4425045e75c74 332 Gene3D G3DSA:3.40.47.10 174 287 3.4E-6 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10920 cebaa2fa3807a7cc2eb4425045e75c74 332 SUPERFAMILY SSF53901 168 286 1.87E-6 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10920 cebaa2fa3807a7cc2eb4425045e75c74 332 SUPERFAMILY SSF53901 10 183 1.86E-14 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10920 cebaa2fa3807a7cc2eb4425045e75c74 332 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 121 194 1.2E-6 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 JE55_RS10920 cebaa2fa3807a7cc2eb4425045e75c74 332 Gene3D G3DSA:3.40.47.10 57 173 4.6E-14 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS01875 38e68fa24696f02830f16b0ed22f4951 331 Pfam PF03864 Phage major capsid protein E 12 330 7.5E-83 T 22-04-2016 IPR005564 Major capsid protein GpE GO:0019028 JE55_RS07800 d5dcd308e20e89c1e06cb1029a83118e 295 SUPERFAMILY SSF53790 16 236 3.4E-73 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS07800 d5dcd308e20e89c1e06cb1029a83118e 295 PANTHER PTHR21091 16 237 8.0E-74 T 22-04-2016 JE55_RS07800 d5dcd308e20e89c1e06cb1029a83118e 295 PIRSF PIRSF005917 6 292 1.4E-95 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS07800 d5dcd308e20e89c1e06cb1029a83118e 295 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 95 106 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS07800 d5dcd308e20e89c1e06cb1029a83118e 295 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 18 215 2.4E-27 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS07800 d5dcd308e20e89c1e06cb1029a83118e 295 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 18 287 1.1E-72 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS07800 d5dcd308e20e89c1e06cb1029a83118e 295 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 17 238 35.037 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 JE55_RS07800 d5dcd308e20e89c1e06cb1029a83118e 295 Gene3D G3DSA:3.30.950.10 126 239 7.3E-37 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 JE55_RS07800 d5dcd308e20e89c1e06cb1029a83118e 295 PANTHER PTHR21091:SF18 16 237 8.0E-74 T 22-04-2016 JE55_RS07800 d5dcd308e20e89c1e06cb1029a83118e 295 Gene3D G3DSA:3.40.1010.10 17 125 2.1E-14 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 JE55_RS13410 51596a379514815a40cfa2885434da1f 204 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 23 85 1.7E-7 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 JE55_RS13410 51596a379514815a40cfa2885434da1f 204 Gene3D G3DSA:3.40.50.1700 22 88 1.7E-15 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 JE55_RS13410 51596a379514815a40cfa2885434da1f 204 PANTHER PTHR30620 24 115 1.4E-29 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 JE55_RS13410 51596a379514815a40cfa2885434da1f 204 SUPERFAMILY SSF52279 21 88 6.67E-15 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 JE55_RS13410 51596a379514815a40cfa2885434da1f 204 PANTHER PTHR30620:SF18 24 115 1.4E-29 T 22-04-2016 JE55_RS16770 ff48f0539af13f4cf4c7dc2a828a007b 351 Pfam PF12857 TOBE-like domain 287 343 5.4E-14 T 22-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 JE55_RS16770 ff48f0539af13f4cf4c7dc2a828a007b 351 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS16770 ff48f0539af13f4cf4c7dc2a828a007b 351 SUPERFAMILY SSF52540 3 244 2.26E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16770 ff48f0539af13f4cf4c7dc2a828a007b 351 Pfam PF00005 ABC transporter 18 164 1.0E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS16770 ff48f0539af13f4cf4c7dc2a828a007b 351 SUPERFAMILY SSF50331 240 348 4.13E-12 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS16770 ff48f0539af13f4cf4c7dc2a828a007b 351 PANTHER PTHR24220 4 249 5.6E-134 T 22-04-2016 JE55_RS16770 ff48f0539af13f4cf4c7dc2a828a007b 351 Gene3D G3DSA:3.40.50.300 3 244 2.1E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16770 ff48f0539af13f4cf4c7dc2a828a007b 351 PANTHER PTHR24220:SF123 4 249 5.6E-134 T 22-04-2016 JE55_RS16770 ff48f0539af13f4cf4c7dc2a828a007b 351 Gene3D G3DSA:2.40.50.100 294 341 1.2E-4 T 22-04-2016 JE55_RS16770 ff48f0539af13f4cf4c7dc2a828a007b 351 SMART SM00382 27 214 6.2E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS16770 ff48f0539af13f4cf4c7dc2a828a007b 351 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 4.1E-118 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 SUPERFAMILY SSF51011 498 576 1.84E-17 T 22-04-2016 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 Gene3D G3DSA:3.90.400.10 140 208 3.4E-25 T 22-04-2016 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 Pfam PF16657 Maltogenic Amylase, C-terminal domain 495 573 5.3E-27 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 PANTHER PTHR10357:SF164 471 603 2.2E-275 T 22-04-2016 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 PANTHER PTHR10357:SF164 19 432 2.2E-275 T 22-04-2016 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 Gene3D G3DSA:3.90.1200.10 879 1072 8.7E-4 T 22-04-2016 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 Gene3D G3DSA:3.20.20.80 216 441 6.8E-109 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 Gene3D G3DSA:3.20.20.80 42 139 6.8E-109 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 Gene3D G3DSA:3.20.20.80 474 487 6.8E-109 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 SUPERFAMILY SSF56112 1048 1082 7.55E-15 T 22-04-2016 IPR011009 Protein kinase-like domain JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 SUPERFAMILY SSF56112 743 833 7.55E-15 T 22-04-2016 IPR011009 Protein kinase-like domain JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 SUPERFAMILY SSF56112 879 1021 7.55E-15 T 22-04-2016 IPR011009 Protein kinase-like domain JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 Gene3D G3DSA:2.60.40.1180 495 576 6.7E-17 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 Pfam PF00128 Alpha amylase, catalytic domain 63 416 2.1E-74 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 PANTHER PTHR10357 471 603 2.2E-275 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 PANTHER PTHR10357 19 432 2.2E-275 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 SUPERFAMILY SSF51445 38 358 5.37E-131 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 SUPERFAMILY SSF51445 385 492 5.37E-131 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 SMART SM00642 48 442 5.1E-99 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 40 576 6.5E-278 T 22-04-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 JE55_RS15465 e41e153ad2ea54288cc06a81eed46f66 1131 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 593 1116 4.2E-215 T 22-04-2016 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain JE55_RS14675 58118258b54f8cf336244bcab1cdd7af 484 SUPERFAMILY SSF109604 16 282 2.7E-49 T 22-04-2016 JE55_RS14675 58118258b54f8cf336244bcab1cdd7af 484 PANTHER PTHR33525:SF3 19 300 8.4E-26 T 22-04-2016 JE55_RS14675 58118258b54f8cf336244bcab1cdd7af 484 PANTHER PTHR33525 19 300 8.4E-26 T 22-04-2016 JE55_RS14675 58118258b54f8cf336244bcab1cdd7af 484 Gene3D G3DSA:1.10.3150.10 14 284 9.7E-74 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD JE55_RS14675 58118258b54f8cf336244bcab1cdd7af 484 Pfam PF08668 HDOD domain 27 216 4.7E-36 T 22-04-2016 IPR013976 Metal-dependent hydrolase HDOD JE55_RS19525 a0ef6e828f45e99541e3f8df711c3b62 350 SUPERFAMILY SSF51621 2 349 3.41E-136 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS19525 a0ef6e828f45e99541e3f8df711c3b62 350 Pfam PF00463 Isocitrate lyase family 9 197 1.2E-48 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 JE55_RS19525 a0ef6e828f45e99541e3f8df711c3b62 350 Pfam PF00463 Isocitrate lyase family 199 349 1.0E-40 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 JE55_RS19525 a0ef6e828f45e99541e3f8df711c3b62 350 ProSitePatterns PS00161 Isocitrate lyase signature. 135 140 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 JE55_RS19525 a0ef6e828f45e99541e3f8df711c3b62 350 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 4 197 7.9E-92 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 JE55_RS19525 a0ef6e828f45e99541e3f8df711c3b62 350 Gene3D G3DSA:3.20.20.60 3 350 5.0E-146 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS19525 a0ef6e828f45e99541e3f8df711c3b62 350 PIRSF PIRSF001362 1 350 9.9E-202 T 22-04-2016 JE55_RS19525 a0ef6e828f45e99541e3f8df711c3b62 350 PANTHER PTHR21631 1 350 1.1E-144 T 22-04-2016 JE55_RS07670 abc7a17b1fdb93a3b13922267339c1a2 468 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 JE55_RS07670 abc7a17b1fdb93a3b13922267339c1a2 468 PIRSF PIRSF006060 1 460 3.9E-68 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS07670 abc7a17b1fdb93a3b13922267339c1a2 468 PANTHER PTHR11785 7 454 3.3E-263 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS07670 abc7a17b1fdb93a3b13922267339c1a2 468 Pfam PF00324 Amino acid permease 21 447 3.0E-114 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 JE55_RS07670 abc7a17b1fdb93a3b13922267339c1a2 468 PANTHER PTHR11785:SF29 7 454 3.3E-263 T 22-04-2016 JE55_RS01455 d7b05ef6820ab3a31f3277c708d01e4e 346 Gene3D G3DSA:1.10.3720.10 107 332 5.8E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS01455 d7b05ef6820ab3a31f3277c708d01e4e 346 PANTHER PTHR30465:SF66 1 341 4.6E-170 T 22-04-2016 JE55_RS01455 d7b05ef6820ab3a31f3277c708d01e4e 346 SUPERFAMILY SSF161098 106 323 1.13E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS01455 d7b05ef6820ab3a31f3277c708d01e4e 346 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 339 1.2E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS01455 d7b05ef6820ab3a31f3277c708d01e4e 346 PANTHER PTHR30465 1 341 4.6E-170 T 22-04-2016 JE55_RS08665 0088600b65ea602632733d036a3974aa 199 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 50 197 4.8E-27 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 JE55_RS08665 0088600b65ea602632733d036a3974aa 199 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 53 74 2.1E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08665 0088600b65ea602632733d036a3974aa 199 SUPERFAMILY SSF54523 55 136 9.42E-12 T 22-04-2016 JE55_RS08665 0088600b65ea602632733d036a3974aa 199 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 53 73 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS08665 0088600b65ea602632733d036a3974aa 199 Pfam PF12019 Type II transport protein GspH 89 194 3.0E-7 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 JE55_RS08665 0088600b65ea602632733d036a3974aa 199 Gene3D G3DSA:3.55.40.10 85 147 3.9E-6 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 JE55_RS08665 0088600b65ea602632733d036a3974aa 199 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 50 74 3.6E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site JE55_RS06995 a7075d29e509933bd1c7bf8bb5d52061 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 43.093 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 JE55_RS06995 a7075d29e509933bd1c7bf8bb5d52061 195 SUPERFAMILY SSF54211 88 178 8.04E-34 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS06995 a7075d29e509933bd1c7bf8bb5d52061 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 JE55_RS06995 a7075d29e509933bd1c7bf8bb5d52061 195 PANTHER PTHR23133 1 195 6.4E-101 T 22-04-2016 JE55_RS06995 a7075d29e509933bd1c7bf8bb5d52061 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 JE55_RS06995 a7075d29e509933bd1c7bf8bb5d52061 195 Gene3D G3DSA:3.30.230.40 90 195 2.1E-29 T 22-04-2016 JE55_RS06995 a7075d29e509933bd1c7bf8bb5d52061 195 SUPERFAMILY SSF54211 1 86 2.53E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS06995 a7075d29e509933bd1c7bf8bb5d52061 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 8.9E-63 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 JE55_RS06995 a7075d29e509933bd1c7bf8bb5d52061 195 PANTHER PTHR23133:SF2 1 195 6.4E-101 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 JE55_RS06995 a7075d29e509933bd1c7bf8bb5d52061 195 Gene3D G3DSA:3.30.230.40 1 89 5.7E-38 T 22-04-2016 JE55_RS11855 029fd1cc5fab3e0b5a9aafe877a0bd17 166 SUPERFAMILY SSF50475 52 130 6.7E-5 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS14610 ffa42a8ab2fd73ec74f3813cf904a5b2 347 SUPERFAMILY SSF46689 298 346 1.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS14610 ffa42a8ab2fd73ec74f3813cf904a5b2 347 Gene3D G3DSA:1.10.10.60 297 346 1.6E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS14610 ffa42a8ab2fd73ec74f3813cf904a5b2 347 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 33 220 5.2E-26 T 22-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal JE55_RS14610 ffa42a8ab2fd73ec74f3813cf904a5b2 347 SMART SM00342 263 345 1.2E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS14610 ffa42a8ab2fd73ec74f3813cf904a5b2 347 PANTHER PTHR11019:SF52 208 346 8.4E-26 T 22-04-2016 JE55_RS14610 ffa42a8ab2fd73ec74f3813cf904a5b2 347 Gene3D G3DSA:1.10.10.60 253 288 4.6E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS14610 ffa42a8ab2fd73ec74f3813cf904a5b2 347 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 314 329 1.2E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS14610 ffa42a8ab2fd73ec74f3813cf904a5b2 347 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 329 345 1.2E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS14610 ffa42a8ab2fd73ec74f3813cf904a5b2 347 Pfam PF12833 Helix-turn-helix domain 269 346 1.5E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS14610 ffa42a8ab2fd73ec74f3813cf904a5b2 347 PANTHER PTHR11019 208 346 8.4E-26 T 22-04-2016 JE55_RS14610 ffa42a8ab2fd73ec74f3813cf904a5b2 347 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 299 341 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 JE55_RS02035 f26a84614463edc043e26078fe9ca629 209 Gene3D G3DSA:3.90.870.10 2 203 6.1E-64 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS02035 f26a84614463edc043e26078fe9ca629 209 Pfam PF01300 Telomere recombination 23 198 1.0E-45 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 JE55_RS02035 f26a84614463edc043e26078fe9ca629 209 SUPERFAMILY SSF55821 1 204 6.1E-64 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain JE55_RS02035 f26a84614463edc043e26078fe9ca629 209 PANTHER PTHR17490:SF7 1 205 3.1E-85 T 22-04-2016 JE55_RS02035 f26a84614463edc043e26078fe9ca629 209 PANTHER PTHR17490 1 205 3.1E-85 T 22-04-2016 JE55_RS02035 f26a84614463edc043e26078fe9ca629 209 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 201 3.8E-61 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 JE55_RS11355 7137e5fc7c91b368ea4e5afdecefdb0c 120 Gene3D G3DSA:3.90.330.10 23 68 3.2E-4 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 JE55_RS11355 7137e5fc7c91b368ea4e5afdecefdb0c 120 TIGRFAM TIGR03795 RNP_Burkhold: ribosomal natural product, two-chain TOMM family 6 112 2.1E-45 T 22-04-2016 IPR022261 Ribosomal natural product, two-chain TOMM family JE55_RS11355 7137e5fc7c91b368ea4e5afdecefdb0c 120 SUPERFAMILY SSF56209 10 72 1.01E-11 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 JE55_RS07190 78617ee3994dbe16102dfe9bc8d00e7a 108 Gene3D G3DSA:3.30.920.10 1 106 2.5E-27 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 JE55_RS07190 78617ee3994dbe16102dfe9bc8d00e7a 108 SUPERFAMILY SSF55387 1 106 2.27E-31 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 JE55_RS07190 78617ee3994dbe16102dfe9bc8d00e7a 108 Hamap MF_00142 Protein CyaY [cyaY]. 1 106 26.546 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 JE55_RS07190 78617ee3994dbe16102dfe9bc8d00e7a 108 Pfam PF01491 Frataxin-like domain 1 102 7.7E-23 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 JE55_RS07190 78617ee3994dbe16102dfe9bc8d00e7a 108 PANTHER PTHR16821 1 107 1.5E-22 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 JE55_RS07190 78617ee3994dbe16102dfe9bc8d00e7a 108 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 3 106 7.0E-36 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 JE55_RS07190 78617ee3994dbe16102dfe9bc8d00e7a 108 ProSitePatterns PS01344 Frataxin family signature. 51 65 - T 22-04-2016 IPR020895 Frataxin conserved site JE55_RS07190 78617ee3994dbe16102dfe9bc8d00e7a 108 SMART SM01219 1 107 1.0E-46 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 SUPERFAMILY SSF56059 102 324 4.42E-64 T 22-04-2016 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 42.557 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 PANTHER PTHR10520 1 423 8.1E-260 T 22-04-2016 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 Gene3D G3DSA:3.30.1490.20 119 188 1.9E-33 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 SMART SM01209 101 294 2.9E-136 T 22-04-2016 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 SUPERFAMILY SSF51246 327 420 6.36E-31 T 22-04-2016 IPR011054 Rudiment single hybrid motif JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.3E-34 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 1.5E-29 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 1.9E-172 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 6.5E-77 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 Gene3D G3DSA:3.30.470.20 189 326 6.1E-60 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 Gene3D G3DSA:3.40.50.20 2 93 2.1E-35 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 Gene3D G3DSA:3.90.600.10 329 419 4.2E-34 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 SMART SM01210 328 420 4.7E-51 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 JE55_RS14145 aec6a77a097b4e78868e1a3e512e6801 425 SUPERFAMILY SSF52440 1 101 3.6E-34 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS16715 18a6ab749153bd93ef2d191ef2736e6f 353 PANTHER PTHR34184:SF3 37 346 1.2E-53 T 22-04-2016 JE55_RS16715 18a6ab749153bd93ef2d191ef2736e6f 353 Pfam PF03773 Predicted permease 125 347 1.7E-20 T 22-04-2016 IPR005524 Predicted permease DUF318 JE55_RS16715 18a6ab749153bd93ef2d191ef2736e6f 353 Pfam PF03773 Predicted permease 15 150 1.7E-9 T 22-04-2016 IPR005524 Predicted permease DUF318 JE55_RS16715 18a6ab749153bd93ef2d191ef2736e6f 353 PANTHER PTHR34184 37 346 1.2E-53 T 22-04-2016 JE55_RS09090 18294fe56b20f10cca75d3a1dd1b9302 184 PANTHER PTHR38784 1 183 1.9E-78 T 22-04-2016 JE55_RS09090 18294fe56b20f10cca75d3a1dd1b9302 184 Pfam PF07152 YaeQ protein 1 168 2.7E-77 T 22-04-2016 IPR009822 YaeQ JE55_RS09090 18294fe56b20f10cca75d3a1dd1b9302 184 SUPERFAMILY SSF52980 4 178 5.09E-73 T 22-04-2016 IPR011335 Restriction endonuclease type II-like JE55_RS09090 18294fe56b20f10cca75d3a1dd1b9302 184 SMART SM01322 1 177 3.4E-121 T 22-04-2016 IPR009822 YaeQ JE55_RS09090 18294fe56b20f10cca75d3a1dd1b9302 184 PIRSF PIRSF011484 1 182 1.2E-70 T 22-04-2016 IPR009822 YaeQ JE55_RS09090 18294fe56b20f10cca75d3a1dd1b9302 184 PANTHER PTHR38784:SF1 1 183 1.9E-78 T 22-04-2016 JE55_RS09090 18294fe56b20f10cca75d3a1dd1b9302 184 Gene3D G3DSA:3.10.640.10 1 180 4.2E-82 T 22-04-2016 JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 PRINTS PR00990 Ribokinase signature 234 245 7.1E-36 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 PRINTS PR00990 Ribokinase signature 190 205 7.1E-36 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 PRINTS PR00990 Ribokinase signature 121 134 7.1E-36 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 PRINTS PR00990 Ribokinase signature 49 68 7.1E-36 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 PRINTS PR00990 Ribokinase signature 22 43 7.1E-36 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 PANTHER PTHR10584:SF184 20 317 1.1E-90 T 22-04-2016 JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 20 317 5.6E-108 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 264 277 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 Pfam PF00294 pfkB family carbohydrate kinase 20 312 5.7E-69 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 PANTHER PTHR10584 20 317 1.1E-90 T 22-04-2016 JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 Gene3D G3DSA:3.40.1190.20 20 319 2.4E-94 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS16800 0e015ec431a73409f2752225420b2f11 324 SUPERFAMILY SSF53613 20 319 3.27E-80 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS12485 34bf2612560444115daaf6a32a37ebb2 315 PANTHER PTHR34294:SF2 1 315 2.0E-106 T 22-04-2016 JE55_RS12485 34bf2612560444115daaf6a32a37ebb2 315 Gene3D G3DSA:3.40.50.1360 56 313 1.4E-69 T 22-04-2016 JE55_RS12485 34bf2612560444115daaf6a32a37ebb2 315 PANTHER PTHR34294 1 315 2.0E-106 T 22-04-2016 JE55_RS12485 34bf2612560444115daaf6a32a37ebb2 315 Pfam PF04198 Putative sugar-binding domain 59 313 2.3E-63 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 JE55_RS12485 34bf2612560444115daaf6a32a37ebb2 315 SUPERFAMILY SSF100950 62 313 1.02E-60 T 22-04-2016 JE55_RS07275 d5b96ff0f15e6a62d582dc769e365557 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07275 d5b96ff0f15e6a62d582dc769e365557 38 PANTHER PTHR18804 1 38 2.2E-18 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07275 d5b96ff0f15e6a62d582dc769e365557 38 SUPERFAMILY SSF57840 1 38 1.23E-16 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07275 d5b96ff0f15e6a62d582dc769e365557 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 2.7E-20 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07275 d5b96ff0f15e6a62d582dc769e365557 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.086 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07275 d5b96ff0f15e6a62d582dc769e365557 38 Pfam PF00444 Ribosomal protein L36 1 38 4.5E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07275 d5b96ff0f15e6a62d582dc769e365557 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 7.0E-10 T 22-04-2016 JE55_RS12605 ce830d05b199cd21bbbca447b313c9df 518 Gene3D G3DSA:3.40.630.40 287 383 1.0E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 JE55_RS12605 ce830d05b199cd21bbbca447b313c9df 518 Gene3D G3DSA:3.40.630.40 431 507 1.0E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 JE55_RS12605 ce830d05b199cd21bbbca447b313c9df 518 PANTHER PTHR30404 271 511 5.7E-104 T 22-04-2016 JE55_RS12605 ce830d05b199cd21bbbca447b313c9df 518 PANTHER PTHR30404 54 199 5.7E-104 T 22-04-2016 JE55_RS12605 ce830d05b199cd21bbbca447b313c9df 518 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 288 503 1.3E-48 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 JE55_RS12605 ce830d05b199cd21bbbca447b313c9df 518 Pfam PF11741 AMIN domain 54 157 1.9E-24 T 22-04-2016 IPR021731 AMIN domain JE55_RS12605 ce830d05b199cd21bbbca447b313c9df 518 PANTHER PTHR30404:SF0 271 511 5.7E-104 T 22-04-2016 JE55_RS12605 ce830d05b199cd21bbbca447b313c9df 518 PANTHER PTHR30404:SF0 54 199 5.7E-104 T 22-04-2016 JE55_RS12605 ce830d05b199cd21bbbca447b313c9df 518 SMART SM00646 348 503 1.3E-63 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 JE55_RS12605 ce830d05b199cd21bbbca447b313c9df 518 SUPERFAMILY SSF53187 430 506 4.39E-56 T 22-04-2016 JE55_RS12605 ce830d05b199cd21bbbca447b313c9df 518 SUPERFAMILY SSF53187 287 382 4.39E-56 T 22-04-2016 JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 Gene3D G3DSA:1.25.40.10 62 242 4.3E-42 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 Pfam PF08238 Sel1 repeat 158 189 9.9E-7 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 Pfam PF08238 Sel1 repeat 192 227 0.0022 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 Pfam PF08238 Sel1 repeat 120 154 2.1E-6 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 Pfam PF08238 Sel1 repeat 85 117 3.2E-6 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 SUPERFAMILY SSF81901 58 235 3.31E-35 T 22-04-2016 JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 PANTHER PTHR11102 61 237 1.6E-35 T 22-04-2016 JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 PANTHER PTHR11102 6 15 1.6E-35 T 22-04-2016 JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 SMART SM00671 155 190 1.4E-7 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 SMART SM00671 191 227 9.3E-6 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 SMART SM00671 83 118 0.002 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS09285 2d88f05396a3c5e4bd7c71e4d2d03582 258 SMART SM00671 119 154 3.2E-6 T 22-04-2016 IPR006597 Sel1-like repeat JE55_RS15085 8f1043b395ab5984f0e0c16e113aa0ce 548 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 4 548 3.4E-294 T 22-04-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 JE55_RS15085 8f1043b395ab5984f0e0c16e113aa0ce 548 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 4 548 6.2E-273 T 22-04-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 JE55_RS15085 8f1043b395ab5984f0e0c16e113aa0ce 548 PANTHER PTHR13707 119 269 2.6E-89 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 JE55_RS15085 8f1043b395ab5984f0e0c16e113aa0ce 548 PANTHER PTHR13707:SF27 119 269 2.6E-89 T 22-04-2016 JE55_RS15085 8f1043b395ab5984f0e0c16e113aa0ce 548 SUPERFAMILY SSF100950 32 271 1.67E-28 T 22-04-2016 JE55_RS15085 8f1043b395ab5984f0e0c16e113aa0ce 548 Gene3D G3DSA:3.40.1080.10 40 222 5.5E-7 T 22-04-2016 JE55_RS15085 8f1043b395ab5984f0e0c16e113aa0ce 548 SUPERFAMILY SSF100950 220 379 4.65E-20 T 22-04-2016 JE55_RS15085 8f1043b395ab5984f0e0c16e113aa0ce 548 SUPERFAMILY SSF100950 409 507 4.65E-20 T 22-04-2016 JE55_RS22050 198a8cdfae795bd760201157fcea9d65 215 PANTHER PTHR30514 1 215 3.8E-53 T 22-04-2016 JE55_RS22050 198a8cdfae795bd760201157fcea9d65 215 TIGRFAM TIGR00749 glk: glucokinase 1 214 5.3E-69 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 JE55_RS22050 198a8cdfae795bd760201157fcea9d65 215 PANTHER PTHR30514:SF0 1 215 3.8E-53 T 22-04-2016 JE55_RS22050 198a8cdfae795bd760201157fcea9d65 215 Pfam PF02685 Glucokinase 1 214 3.2E-78 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 JE55_RS22050 198a8cdfae795bd760201157fcea9d65 215 SUPERFAMILY SSF53067 2 215 1.85E-43 T 22-04-2016 JE55_RS22050 198a8cdfae795bd760201157fcea9d65 215 Gene3D G3DSA:3.40.367.20 32 214 1.6E-63 T 22-04-2016 JE55_RS08835 abf52e838c66f27951754e5316a40828 243 SMART SM00382 27 226 1.5E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS08835 abf52e838c66f27951754e5316a40828 243 Pfam PF00005 ABC transporter 18 160 1.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS08835 abf52e838c66f27951754e5316a40828 243 SUPERFAMILY SSF52540 3 227 2.39E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08835 abf52e838c66f27951754e5316a40828 243 PANTHER PTHR24220:SF568 4 227 4.6E-68 T 22-04-2016 JE55_RS08835 abf52e838c66f27951754e5316a40828 243 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS08835 abf52e838c66f27951754e5316a40828 243 Gene3D G3DSA:3.40.50.300 3 226 1.1E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08835 abf52e838c66f27951754e5316a40828 243 PANTHER PTHR24220 4 227 4.6E-68 T 22-04-2016 JE55_RS11500 b91f54df286c05068badcb298ba1939d 144 Gene3D G3DSA:1.10.10.10 8 138 3.6E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11500 b91f54df286c05068badcb298ba1939d 144 PANTHER PTHR33164 1 140 6.2E-19 T 22-04-2016 JE55_RS11500 b91f54df286c05068badcb298ba1939d 144 Pfam PF01047 MarR family 32 88 6.5E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS11500 b91f54df286c05068badcb298ba1939d 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 5.7E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS11500 b91f54df286c05068badcb298ba1939d 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 5.7E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS11500 b91f54df286c05068badcb298ba1939d 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 5.7E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS11500 b91f54df286c05068badcb298ba1939d 144 SMART SM00347 25 124 3.5E-15 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS11500 b91f54df286c05068badcb298ba1939d 144 SUPERFAMILY SSF46785 8 137 8.47E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10735 535bb215d8dd7c7e51fcd0596e96d393 158 PIRSF PIRSF032162 1 157 2.1E-36 T 22-04-2016 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane JE55_RS10735 535bb215d8dd7c7e51fcd0596e96d393 158 Pfam PF10003 Integral membrane protein (DUF2244) 19 154 7.8E-46 T 22-04-2016 IPR019253 Protein of unknown function DUF2244, transmembrane JE55_RS08485 b38ccc6aa5e35f047deeaa4d921e8add 251 SMART SM00382 33 216 5.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS08485 b38ccc6aa5e35f047deeaa4d921e8add 251 PANTHER PTHR24220:SF568 10 251 7.0E-109 T 22-04-2016 JE55_RS08485 b38ccc6aa5e35f047deeaa4d921e8add 251 PANTHER PTHR24220 10 251 7.0E-109 T 22-04-2016 JE55_RS08485 b38ccc6aa5e35f047deeaa4d921e8add 251 SUPERFAMILY SSF52540 7 245 7.59E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08485 b38ccc6aa5e35f047deeaa4d921e8add 251 Gene3D G3DSA:3.40.50.300 6 245 5.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08485 b38ccc6aa5e35f047deeaa4d921e8add 251 Pfam PF00005 ABC transporter 25 174 3.9E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS08485 b38ccc6aa5e35f047deeaa4d921e8add 251 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS06195 7848b6e318a0265c6694bd34daa7df66 365 Gene3D G3DSA:1.10.150.130 59 158 3.5E-6 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal JE55_RS06195 7848b6e318a0265c6694bd34daa7df66 365 PANTHER PTHR30349 97 293 9.6E-35 T 22-04-2016 JE55_RS06195 7848b6e318a0265c6694bd34daa7df66 365 PANTHER PTHR30349 312 365 9.6E-35 T 22-04-2016 JE55_RS06195 7848b6e318a0265c6694bd34daa7df66 365 Pfam PF00589 Phage integrase family 165 356 2.2E-23 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS06195 7848b6e318a0265c6694bd34daa7df66 365 PANTHER PTHR30349:SF20 97 293 9.6E-35 T 22-04-2016 JE55_RS06195 7848b6e318a0265c6694bd34daa7df66 365 PANTHER PTHR30349:SF20 312 365 9.6E-35 T 22-04-2016 JE55_RS06195 7848b6e318a0265c6694bd34daa7df66 365 SUPERFAMILY SSF56349 59 363 2.16E-51 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS06195 7848b6e318a0265c6694bd34daa7df66 365 Gene3D G3DSA:1.10.443.10 164 364 1.8E-34 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS11105 4b6be033b41784a504a770b039650841 204 Gene3D G3DSA:2.40.240.10 2 93 1.4E-31 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 JE55_RS11105 4b6be033b41784a504a770b039650841 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 174 1.1E-39 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 JE55_RS11105 4b6be033b41784a504a770b039650841 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 1 184 29.596 T 22-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 JE55_RS11105 4b6be033b41784a504a770b039650841 204 Pfam PF01386 Ribosomal L25p family 5 90 1.8E-23 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 JE55_RS11105 4b6be033b41784a504a770b039650841 204 SUPERFAMILY SSF50715 2 192 5.93E-50 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 JE55_RS11105 4b6be033b41784a504a770b039650841 204 Gene3D G3DSA:2.170.120.20 96 193 6.5E-26 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain JE55_RS11105 4b6be033b41784a504a770b039650841 204 PANTHER PTHR33284 5 200 5.0E-50 T 22-04-2016 JE55_RS11105 4b6be033b41784a504a770b039650841 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 98 186 3.6E-26 T 22-04-2016 IPR020057 Ribosomal protein L25, beta domain JE55_RS11105 4b6be033b41784a504a770b039650841 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 93 5.0E-50 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 JE55_RS15170 c29d625f88c4139d36aaafa20cd809fd 268 SUPERFAMILY SSF56281 5 267 2.1E-65 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS15170 c29d625f88c4139d36aaafa20cd809fd 268 Pfam PF00753 Metallo-beta-lactamase superfamily 14 179 5.8E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS15170 c29d625f88c4139d36aaafa20cd809fd 268 SMART SM00849 14 179 8.9E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS15170 c29d625f88c4139d36aaafa20cd809fd 268 PANTHER PTHR11935 9 268 2.1E-83 T 22-04-2016 JE55_RS15170 c29d625f88c4139d36aaafa20cd809fd 268 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 180 267 5.6E-24 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 JE55_RS15170 c29d625f88c4139d36aaafa20cd809fd 268 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 7 267 1.7E-97 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 JE55_RS15170 c29d625f88c4139d36aaafa20cd809fd 268 PIRSF PIRSF005457 1 267 7.1E-101 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 JE55_RS15170 c29d625f88c4139d36aaafa20cd809fd 268 Gene3D G3DSA:3.60.15.10 7 267 1.0E-82 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS15170 c29d625f88c4139d36aaafa20cd809fd 268 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 4 267 42.471 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 JE55_RS15170 c29d625f88c4139d36aaafa20cd809fd 268 PANTHER PTHR11935:SF7 9 268 2.1E-83 T 22-04-2016 JE55_RS15735 bd978b3455d2e717ce3e38bcc4baa2d3 186 PANTHER PTHR37089 1 186 9.4E-19 T 22-04-2016 JE55_RS15735 bd978b3455d2e717ce3e38bcc4baa2d3 186 SMART SM00972 124 183 1.8E-17 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS15735 bd978b3455d2e717ce3e38bcc4baa2d3 186 Pfam PF05229 Spore Coat Protein U domain 28 183 1.5E-27 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS08055 111a8e1bffb6aa7c83165944cc79e88c 354 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 254 341 9.9E-25 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 JE55_RS08055 111a8e1bffb6aa7c83165944cc79e88c 354 PANTHER PTHR34069 13 350 1.4E-64 T 22-04-2016 JE55_RS08055 111a8e1bffb6aa7c83165944cc79e88c 354 SUPERFAMILY SSF53901 19 342 3.35E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08055 111a8e1bffb6aa7c83165944cc79e88c 354 Gene3D G3DSA:3.40.47.10 17 175 3.7E-37 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08055 111a8e1bffb6aa7c83165944cc79e88c 354 Gene3D G3DSA:3.40.47.10 176 343 1.0E-37 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08055 111a8e1bffb6aa7c83165944cc79e88c 354 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 122 199 2.9E-18 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 3.0E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 3.0E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 3.0E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 Gene3D G3DSA:1.10.10.10 11 62 1.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 SUPERFAMILY SSF54909 73 158 4.83E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 Pfam PF01037 Lrp/AsnC ligand binding domain 77 151 2.9E-19 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 PANTHER PTHR30154 3 162 3.0E-79 T 22-04-2016 JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 Pfam PF13412 Winged helix-turn-helix DNA-binding 11 58 2.5E-19 T 22-04-2016 JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 Gene3D G3DSA:3.30.70.920 63 158 1.7E-31 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 SUPERFAMILY SSF46785 10 70 5.09E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 PANTHER PTHR30154:SF0 3 162 3.0E-79 T 22-04-2016 JE55_RS03495 7679986f903402882a9c9ecb979b8844 162 SMART SM00344 11 120 1.2E-49 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 Gene3D G3DSA:3.30.300.30 479 578 4.0E-24 T 22-04-2016 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 PANTHER PTHR24096:SF170 198 622 2.7E-175 T 22-04-2016 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 PANTHER PTHR24096:SF170 2 166 2.7E-175 T 22-04-2016 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 Gene3D G3DSA:3.40.50.980 198 230 2.0E-22 T 22-04-2016 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 Gene3D G3DSA:3.40.50.980 27 165 2.0E-22 T 22-04-2016 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 Pfam PF00501 AMP-binding enzyme 30 484 2.1E-74 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 ProSitePatterns PS00455 Putative AMP-binding domain signature. 224 235 - T 22-04-2016 IPR020845 AMP-binding, conserved site JE55_RS17325 6e330e72d19089142ecf826725586b57 658 Gene3D G3DSA:3.40.50.980 231 395 5.5E-30 T 22-04-2016 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 SUPERFAMILY SSF56801 21 580 4.71E-116 T 22-04-2016 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 PANTHER PTHR24096 198 622 2.7E-175 T 22-04-2016 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 PANTHER PTHR24096 2 166 2.7E-175 T 22-04-2016 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 Gene3D G3DSA:2.30.38.10 401 478 4.2E-15 T 22-04-2016 JE55_RS17325 6e330e72d19089142ecf826725586b57 658 Pfam PF13193 AMP-binding enzyme C-terminal domain 494 569 1.3E-15 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain JE55_RS09335 85670f86c539a256c75065822878e837 256 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 251 1.0E-72 T 22-04-2016 JE55_RS09335 85670f86c539a256c75065822878e837 256 PANTHER PTHR22748 1 255 1.1E-98 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 JE55_RS09335 85670f86c539a256c75065822878e837 256 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 253 8.4E-79 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 JE55_RS09335 85670f86c539a256c75065822878e837 256 Gene3D G3DSA:3.60.10.10 1 254 3.3E-94 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS09335 85670f86c539a256c75065822878e837 256 SUPERFAMILY SSF56219 2 254 6.28E-76 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS09335 85670f86c539a256c75065822878e837 256 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 246 3.6E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS04645 ba7e66e0b961d60565edf5459b4d3759 260 Gene3D G3DSA:3.40.190.10 150 151 9.7E-13 T 22-04-2016 JE55_RS04645 ba7e66e0b961d60565edf5459b4d3759 260 Gene3D G3DSA:3.40.190.10 218 245 9.7E-13 T 22-04-2016 JE55_RS04645 ba7e66e0b961d60565edf5459b4d3759 260 Gene3D G3DSA:3.40.190.10 1 103 9.7E-13 T 22-04-2016 JE55_RS04645 ba7e66e0b961d60565edf5459b4d3759 260 PANTHER PTHR30632:SF5 13 257 9.5E-67 T 22-04-2016 JE55_RS04645 ba7e66e0b961d60565edf5459b4d3759 260 PANTHER PTHR30632 13 257 9.5E-67 T 22-04-2016 JE55_RS04645 ba7e66e0b961d60565edf5459b4d3759 260 SUPERFAMILY SSF53850 27 254 1.2E-40 T 22-04-2016 JE55_RS04645 ba7e66e0b961d60565edf5459b4d3759 260 Pfam PF13531 Bacterial extracellular solute-binding protein 28 246 1.4E-31 T 22-04-2016 JE55_RS15805 0453d35317313c3be31bf7caf0c7e5b4 286 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 144 232 1.9E-18 T 22-04-2016 JE55_RS15805 0453d35317313c3be31bf7caf0c7e5b4 286 SUPERFAMILY SSF55166 69 238 1.53E-26 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain JE55_RS06460 3dc3f915f9393f43866cfb47f55d33dc 343 PANTHER PTHR11922:SF5 1 343 1.6E-112 T 22-04-2016 JE55_RS06460 3dc3f915f9393f43866cfb47f55d33dc 343 Gene3D G3DSA:1.20.970.10 6 72 5.4E-25 T 22-04-2016 JE55_RS06460 3dc3f915f9393f43866cfb47f55d33dc 343 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 1.6E-11 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain JE55_RS06460 3dc3f915f9393f43866cfb47f55d33dc 343 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 1.5E-94 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 JE55_RS06460 3dc3f915f9393f43866cfb47f55d33dc 343 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 336 1.8E-126 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 JE55_RS06460 3dc3f915f9393f43866cfb47f55d33dc 343 SUPERFAMILY SSF47648 4 71 2.75E-16 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain JE55_RS06460 3dc3f915f9393f43866cfb47f55d33dc 343 PANTHER PTHR11922 1 343 1.6E-112 T 22-04-2016 JE55_RS06460 3dc3f915f9393f43866cfb47f55d33dc 343 Gene3D G3DSA:3.40.1030.10 76 340 7.8E-107 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 JE55_RS06460 3dc3f915f9393f43866cfb47f55d33dc 343 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 37.693 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 JE55_RS06460 3dc3f915f9393f43866cfb47f55d33dc 343 SUPERFAMILY SSF52418 79 340 4.58E-97 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 JE55_RS10535 ea40f197a442bf494ae2d118338de508 329 PIRSF PIRSF005963 6 327 4.7E-131 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 JE55_RS10535 ea40f197a442bf494ae2d118338de508 329 SMART SM00729 92 301 7.8E-17 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 JE55_RS10535 ea40f197a442bf494ae2d118338de508 329 Pfam PF04055 Radical SAM superfamily 99 259 4.7E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS10535 ea40f197a442bf494ae2d118338de508 329 Gene3D G3DSA:3.20.20.70 60 320 1.2E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS10535 ea40f197a442bf494ae2d118338de508 329 TIGRFAM TIGR00510 lipA: lipoyl synthase 41 324 1.7E-131 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 JE55_RS10535 ea40f197a442bf494ae2d118338de508 329 SUPERFAMILY SSF102114 59 324 1.44E-68 T 22-04-2016 JE55_RS10535 ea40f197a442bf494ae2d118338de508 329 Hamap MF_00206 Lipoyl synthase [lipA]. 44 329 155.814 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 JE55_RS10535 ea40f197a442bf494ae2d118338de508 329 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 40 81 3.3E-9 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 JE55_RS10535 ea40f197a442bf494ae2d118338de508 329 PANTHER PTHR10949 41 322 5.7E-168 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 JE55_RS09655 471e8719083549ae6804c355f98afefa 336 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 333 7.6E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS09655 471e8719083549ae6804c355f98afefa 336 PANTHER PTHR30465:SF0 191 334 1.0E-145 T 22-04-2016 JE55_RS09655 471e8719083549ae6804c355f98afefa 336 PANTHER PTHR30465:SF0 1 169 1.0E-145 T 22-04-2016 JE55_RS09655 471e8719083549ae6804c355f98afefa 336 Gene3D G3DSA:1.10.3720.10 90 163 5.3E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS09655 471e8719083549ae6804c355f98afefa 336 Gene3D G3DSA:1.10.3720.10 200 330 5.3E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS09655 471e8719083549ae6804c355f98afefa 336 SUPERFAMILY SSF161098 91 160 8.83E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS09655 471e8719083549ae6804c355f98afefa 336 SUPERFAMILY SSF161098 197 321 8.83E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS09655 471e8719083549ae6804c355f98afefa 336 PANTHER PTHR30465 191 334 1.0E-145 T 22-04-2016 JE55_RS09655 471e8719083549ae6804c355f98afefa 336 PANTHER PTHR30465 1 169 1.0E-145 T 22-04-2016 JE55_RS15480 e2f9f525209cc056581d80956ec46095 492 Gene3D G3DSA:2.60.40.10 348 428 3.0E-15 T 22-04-2016 IPR013783 Immunoglobulin-like fold JE55_RS15480 e2f9f525209cc056581d80956ec46095 492 SMART SM00060 348 419 6.5E-7 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 JE55_RS15480 e2f9f525209cc056581d80956ec46095 492 Gene3D G3DSA:3.40.50.1820 11 341 3.0E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS15480 e2f9f525209cc056581d80956ec46095 492 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 58 278 1.1E-68 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 JE55_RS15480 e2f9f525209cc056581d80956ec46095 492 Pfam PF10503 Esterase PHB depolymerase 66 272 1.8E-22 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 JE55_RS15480 e2f9f525209cc056581d80956ec46095 492 SUPERFAMILY SSF53474 47 199 3.51E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS15480 e2f9f525209cc056581d80956ec46095 492 SUPERFAMILY SSF49265 349 431 6.33E-13 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 JE55_RS15480 e2f9f525209cc056581d80956ec46095 492 SUPERFAMILY SSF53474 155 356 1.0E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS02050 1050478c3c6e4e0306a4f6fb6b9d2a55 272 SUPERFAMILY SSF47240 49 251 1.78E-18 T 22-04-2016 IPR009078 Ferritin-like superfamily JE55_RS02050 1050478c3c6e4e0306a4f6fb6b9d2a55 272 PANTHER PTHR21496:SF10 7 267 1.2E-81 T 22-04-2016 JE55_RS02050 1050478c3c6e4e0306a4f6fb6b9d2a55 272 Gene3D G3DSA:1.20.1260.10 88 213 3.4E-4 T 22-04-2016 IPR012347 Ferritin-related JE55_RS02050 1050478c3c6e4e0306a4f6fb6b9d2a55 272 PIRSF PIRSF012318 4 271 2.4E-100 T 22-04-2016 IPR011197 Uncharacterised conserved protein UCP012318 JE55_RS02050 1050478c3c6e4e0306a4f6fb6b9d2a55 272 PANTHER PTHR21496 7 267 1.2E-81 T 22-04-2016 JE55_RS02050 1050478c3c6e4e0306a4f6fb6b9d2a55 272 Pfam PF04305 Protein of unknown function (DUF455) 14 260 9.7E-99 T 22-04-2016 IPR007402 Protein of unknown function DUF455 JE55_RS06335 0ef7d415e7b65254acb3e41b9cc4fb89 109 Pfam PF04999 Cell division protein FtsL 3 82 1.6E-17 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 JE55_RS06335 0ef7d415e7b65254acb3e41b9cc4fb89 109 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 1 82 5.3E-24 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 JE55_RS06335 0ef7d415e7b65254acb3e41b9cc4fb89 109 Gene3D G3DSA:3.40.50.720 11 97 3.2E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS06335 0ef7d415e7b65254acb3e41b9cc4fb89 109 Hamap MF_00910 Cell division protein FtsL [ftsL]. 1 84 15.43 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 PANTHER PTHR30481 4 253 2.5E-74 T 22-04-2016 JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 PANTHER PTHR30481:SF4 4 253 2.5E-74 T 22-04-2016 JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 Gene3D G3DSA:3.40.50.150 154 253 5.9E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 Gene3D G3DSA:3.40.50.150 2 58 5.9E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 SUPERFAMILY SSF53335 1 253 1.37E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 3.9E-14 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 49 62 3.9E-14 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 170 182 3.9E-14 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 3.9E-14 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 Gene3D G3DSA:1.10.1020.10 59 116 4.1E-12 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 225 8.6E-24 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 JE55_RS02865 ad4fa45d35ce61619a9cf4aa80fe7458 262 PIRSF PIRSF000398 1 254 1.4E-42 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 PANTHER PTHR32089:SF63 89 601 7.6E-193 T 22-04-2016 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 SMART SM00283 352 599 4.2E-91 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 PANTHER PTHR32089 89 601 7.6E-193 T 22-04-2016 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 Gene3D G3DSA:1.10.287.950 367 571 1.8E-58 T 22-04-2016 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 Gene3D G3DSA:3.30.450.20 134 274 1.3E-24 T 22-04-2016 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 410 598 1.2E-60 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 SUPERFAMILY SSF58104 319 600 7.06E-73 T 22-04-2016 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 Pfam PF00672 HAMP domain 280 348 1.1E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 SUPERFAMILY SSF103190 91 175 3.69E-11 T 22-04-2016 IPR029151 Periplasmic sensor domain-like JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 Pfam PF02743 Cache domain 39 259 1.9E-26 T 22-04-2016 IPR033479 Double Cache domain 1 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 373 402 1.9E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 527 556 1.9E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 450 477 1.9E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 479 508 1.9E-51 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 JE55_RS08130 1ee7eb5e058f2bf77e5bc6887a4795bb 601 SMART SM00304 297 351 1.2E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 Gene3D G3DSA:3.40.50.620 10 186 1.1E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 Pfam PF06574 FAD synthetase 11 166 8.2E-54 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 SUPERFAMILY SSF82114 174 311 5.01E-39 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 Pfam PF01687 Riboflavin kinase 184 307 5.4E-33 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 SUPERFAMILY SSF52374 15 175 5.63E-36 T 22-04-2016 JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 Gene3D G3DSA:2.40.30.30 188 310 2.3E-36 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 307 8.1E-85 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 SMART SM00904 183 308 1.7E-52 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 PANTHER PTHR22749:SF0 1 307 2.4E-113 T 22-04-2016 JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 76 3.2E-8 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 PANTHER PTHR22749 1 307 2.4E-113 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 JE55_RS12875 960748ecaa7a72dd5c7c765dcd2eae94 330 PIRSF PIRSF004491 2 314 6.7E-95 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 JE55_RS26695 b34ddee99e98af82a6f30385d6ce1423 297 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 220 295 5.1E-5 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS26695 b34ddee99e98af82a6f30385d6ce1423 297 PANTHER PTHR22748 192 297 2.7E-25 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 JE55_RS26695 b34ddee99e98af82a6f30385d6ce1423 297 SUPERFAMILY SSF56219 216 296 8.77E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS26695 b34ddee99e98af82a6f30385d6ce1423 297 Gene3D G3DSA:3.60.10.10 211 294 3.6E-23 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS14730 e12ddff7d0b6d7465dd0d15b615d5860 153 PANTHER PTHR33221 2 145 4.9E-47 T 22-04-2016 JE55_RS14730 e12ddff7d0b6d7465dd0d15b615d5860 153 Pfam PF02082 Transcriptional regulator 1 82 8.4E-23 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type JE55_RS14730 e12ddff7d0b6d7465dd0d15b615d5860 153 PANTHER PTHR33221:SF5 2 145 4.9E-47 T 22-04-2016 JE55_RS14730 e12ddff7d0b6d7465dd0d15b615d5860 153 Gene3D G3DSA:1.10.10.10 1 138 4.4E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14730 e12ddff7d0b6d7465dd0d15b615d5860 153 SUPERFAMILY SSF46785 4 135 3.76E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14760 218c0d7c78cb1187c367f69d65e34300 351 PANTHER PTHR30006 20 347 1.6E-124 T 22-04-2016 JE55_RS14760 218c0d7c78cb1187c367f69d65e34300 351 Gene3D G3DSA:3.40.190.10 282 336 3.9E-30 T 22-04-2016 JE55_RS14760 218c0d7c78cb1187c367f69d65e34300 351 Gene3D G3DSA:3.40.190.10 15 130 3.9E-30 T 22-04-2016 JE55_RS14760 218c0d7c78cb1187c367f69d65e34300 351 PANTHER PTHR30006:SF4 20 347 1.6E-124 T 22-04-2016 JE55_RS14760 218c0d7c78cb1187c367f69d65e34300 351 SUPERFAMILY SSF53850 33 348 7.56E-74 T 22-04-2016 JE55_RS14760 218c0d7c78cb1187c367f69d65e34300 351 PIRSF PIRSF002825 9 351 7.9E-81 T 22-04-2016 IPR026045 Ferric binding protein JE55_RS14760 218c0d7c78cb1187c367f69d65e34300 351 Pfam PF13343 Bacterial extracellular solute-binding protein 83 312 1.6E-19 T 22-04-2016 JE55_RS14760 218c0d7c78cb1187c367f69d65e34300 351 Gene3D G3DSA:3.40.190.10 135 281 1.6E-51 T 22-04-2016 JE55_RS00220 758d0e2617e8356aa7afb9e92a142dc0 401 Gene3D G3DSA:3.30.1540.10 228 310 8.2E-29 T 22-04-2016 JE55_RS00220 758d0e2617e8356aa7afb9e92a142dc0 401 SUPERFAMILY SSF89796 5 401 3.53E-135 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS00220 758d0e2617e8356aa7afb9e92a142dc0 401 PANTHER PTHR24023 77 388 1.9E-31 T 22-04-2016 JE55_RS00220 758d0e2617e8356aa7afb9e92a142dc0 401 Gene3D G3DSA:3.40.50.10540 311 401 4.6E-111 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS00220 758d0e2617e8356aa7afb9e92a142dc0 401 Gene3D G3DSA:3.40.50.10540 5 222 4.6E-111 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS00220 758d0e2617e8356aa7afb9e92a142dc0 401 Pfam PF02515 CoA-transferase family III 8 378 5.2E-127 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 JE55_RS00220 758d0e2617e8356aa7afb9e92a142dc0 401 PANTHER PTHR24023:SF593 77 388 1.9E-31 T 22-04-2016 JE55_RS02620 fc06e5c60bf1324327b849bf14560741 145 Pfam PF01814 Hemerythrin HHE cation binding domain 23 129 2.7E-7 T 22-04-2016 IPR012312 Haemerythrin-like JE55_RS02620 fc06e5c60bf1324327b849bf14560741 145 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 15 130 5.9E-16 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 JE55_RS02620 fc06e5c60bf1324327b849bf14560741 145 SUPERFAMILY SSF47188 13 131 1.1E-19 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 JE55_RS02620 fc06e5c60bf1324327b849bf14560741 145 Gene3D G3DSA:1.20.120.50 11 130 3.2E-16 T 22-04-2016 IPR012827 Haemerythrin, metal-binding domain GO:0046872 JE55_RS02620 fc06e5c60bf1324327b849bf14560741 145 ProSitePatterns PS00550 Hemerythrin family signature. 59 82 - T 22-04-2016 IPR016131 Haemerythrin, iron-binding site GO:0046872 JE55_RS03310 d92bd7f4a098d8555898ec3cad2e5e65 262 Pfam PF13317 Protein of unknown function (DUF4088) 16 240 6.0E-115 T 22-04-2016 IPR025146 Protein of unknown function DUF4088 JE55_RS02810 5e043b0d3801405ea90fcfabc991de8b 148 SUPERFAMILY SSF110087 2 145 1.02E-40 T 22-04-2016 IPR007410 DR1885-like metal-binding protein JE55_RS02810 5e043b0d3801405ea90fcfabc991de8b 148 PANTHER PTHR36302 7 142 4.0E-24 T 22-04-2016 JE55_RS02810 5e043b0d3801405ea90fcfabc991de8b 148 PANTHER PTHR36302:SF1 7 142 4.0E-24 T 22-04-2016 JE55_RS02810 5e043b0d3801405ea90fcfabc991de8b 148 Pfam PF04314 Protein of unknown function (DUF461) 31 135 7.1E-29 T 22-04-2016 IPR007410 DR1885-like metal-binding protein JE55_RS14265 2f0266cf7ce49ef31b531d4853d7e9b4 195 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 179 8.2E-62 T 22-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG JE55_RS14265 2f0266cf7ce49ef31b531d4853d7e9b4 195 PANTHER PTHR31223:SF0 1 188 1.5E-87 T 22-04-2016 JE55_RS14265 2f0266cf7ce49ef31b531d4853d7e9b4 195 Gene3D G3DSA:3.40.50.450 2 189 4.4E-73 T 22-04-2016 JE55_RS14265 2f0266cf7ce49ef31b531d4853d7e9b4 195 Pfam PF03641 Possible lysine decarboxylase 46 175 6.8E-40 T 22-04-2016 IPR031100 LOG family JE55_RS14265 2f0266cf7ce49ef31b531d4853d7e9b4 195 SUPERFAMILY SSF102405 1 179 1.53E-61 T 22-04-2016 JE55_RS14265 2f0266cf7ce49ef31b531d4853d7e9b4 195 PANTHER PTHR31223 1 188 1.5E-87 T 22-04-2016 JE55_RS17985 af8f2da083448a9bf373217f15e667d4 325 SUPERFAMILY SSF144083 262 322 2.48E-17 T 22-04-2016 JE55_RS17985 af8f2da083448a9bf373217f15e667d4 325 Gene3D G3DSA:1.20.58.340 131 246 1.1E-37 T 22-04-2016 JE55_RS17985 af8f2da083448a9bf373217f15e667d4 325 Gene3D G3DSA:3.30.460.20 2 130 1.7E-36 T 22-04-2016 JE55_RS17985 af8f2da083448a9bf373217f15e667d4 325 Gene3D G3DSA:1.20.58.340 250 325 8.4E-23 T 22-04-2016 JE55_RS17985 af8f2da083448a9bf373217f15e667d4 325 Pfam PF01544 CorA-like Mg2+ transporter protein 31 321 1.2E-67 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 JE55_RS17985 af8f2da083448a9bf373217f15e667d4 325 PANTHER PTHR21535 16 325 3.8E-48 T 22-04-2016 JE55_RS17985 af8f2da083448a9bf373217f15e667d4 325 SUPERFAMILY SSF143865 2 258 7.98E-69 T 22-04-2016 JE55_RS17985 af8f2da083448a9bf373217f15e667d4 325 PANTHER PTHR21535:SF33 16 325 3.8E-48 T 22-04-2016 JE55_RS17985 af8f2da083448a9bf373217f15e667d4 325 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 21 325 3.5E-67 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 50 495 6.8E-155 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 Pfam PF13365 Trypsin-like peptidase domain 127 258 2.4E-34 T 22-04-2016 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 PANTHER PTHR22939:SF98 23 72 6.9E-128 T 22-04-2016 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 PANTHER PTHR22939:SF98 109 392 6.9E-128 T 22-04-2016 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 PRINTS PR00834 HtrA/DegQ protease family signature 157 177 1.1E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 PRINTS PR00834 HtrA/DegQ protease family signature 251 268 1.1E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 PRINTS PR00834 HtrA/DegQ protease family signature 136 148 1.1E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 PRINTS PR00834 HtrA/DegQ protease family signature 337 349 1.1E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 PRINTS PR00834 HtrA/DegQ protease family signature 197 221 1.1E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 1.1E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 PANTHER PTHR22939 23 72 6.9E-128 T 22-04-2016 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 PANTHER PTHR22939 109 392 6.9E-128 T 22-04-2016 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 Pfam PF13180 PDZ domain 312 387 9.4E-18 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 Pfam PF13180 PDZ domain 413 493 2.3E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 Gene3D G3DSA:2.30.42.10 413 500 1.1E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 Gene3D G3DSA:2.30.42.10 299 395 3.2E-31 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 SUPERFAMILY SSF50156 255 380 5.92E-25 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 SUPERFAMILY SSF50156 413 500 6.05E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 SMART SM00228 412 490 6.7E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 SMART SM00228 312 379 4.7E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 SUPERFAMILY SSF50494 48 289 1.31E-67 T 22-04-2016 IPR009003 Peptidase S1, PA clan JE55_RS03140 e2c77a75da697218d3df346135149df4 502 Gene3D G3DSA:2.40.10.10 50 188 2.0E-37 T 22-04-2016 JE55_RS03140 e2c77a75da697218d3df346135149df4 502 Gene3D G3DSA:2.40.10.10 189 298 1.5E-44 T 22-04-2016 JE55_RS32150 4ab1b58b33206dab04971393f3bb83dd 290 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 192 289 3.1E-23 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 JE55_RS32150 4ab1b58b33206dab04971393f3bb83dd 290 PANTHER PTHR10357 1 289 1.4E-147 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS32150 4ab1b58b33206dab04971393f3bb83dd 290 PANTHER PTHR10357:SF160 1 289 1.4E-147 T 22-04-2016 JE55_RS32150 4ab1b58b33206dab04971393f3bb83dd 290 SUPERFAMILY SSF51011 187 289 4.44E-35 T 22-04-2016 JE55_RS32150 4ab1b58b33206dab04971393f3bb83dd 290 SUPERFAMILY SSF51445 2 181 7.04E-42 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS32150 4ab1b58b33206dab04971393f3bb83dd 290 Gene3D G3DSA:3.20.20.80 2 173 6.4E-26 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS32150 4ab1b58b33206dab04971393f3bb83dd 290 Gene3D G3DSA:2.60.40.1180 187 289 8.3E-38 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta JE55_RS06110 1a00d25126b4da392aede9439ffefd6d 87 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 2.3E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS06110 1a00d25126b4da392aede9439ffefd6d 87 Pfam PF01016 Ribosomal L27 protein 2 79 4.3E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS06110 1a00d25126b4da392aede9439ffefd6d 87 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS06110 1a00d25126b4da392aede9439ffefd6d 87 PANTHER PTHR15893 1 86 2.1E-45 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS06110 1a00d25126b4da392aede9439ffefd6d 87 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 28.558 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS06110 1a00d25126b4da392aede9439ffefd6d 87 Gene3D G3DSA:2.40.50.100 20 83 5.6E-31 T 22-04-2016 JE55_RS06110 1a00d25126b4da392aede9439ffefd6d 87 SUPERFAMILY SSF110324 2 83 4.53E-34 T 22-04-2016 JE55_RS06110 1a00d25126b4da392aede9439ffefd6d 87 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 69 8.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS06110 1a00d25126b4da392aede9439ffefd6d 87 PRINTS PR00063 Ribosomal protein L27 signature 4 28 5.9E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS06110 1a00d25126b4da392aede9439ffefd6d 87 PRINTS PR00063 Ribosomal protein L27 signature 29 53 5.9E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS06110 1a00d25126b4da392aede9439ffefd6d 87 PRINTS PR00063 Ribosomal protein L27 signature 54 78 5.9E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07930 e8d6269ac33e609d56d39e92e9361235 364 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 5 355 41.916 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JE55_RS07930 e8d6269ac33e609d56d39e92e9361235 364 Pfam PF01339 CheB methylesterase 172 350 1.6E-63 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JE55_RS07930 e8d6269ac33e609d56d39e92e9361235 364 Pfam PF00072 Response regulator receiver domain 7 109 2.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS07930 e8d6269ac33e609d56d39e92e9361235 364 SMART SM00448 5 117 1.6E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS07930 e8d6269ac33e609d56d39e92e9361235 364 PIRSF PIRSF000876 2 358 1.6E-142 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JE55_RS07930 e8d6269ac33e609d56d39e92e9361235 364 PANTHER PTHR24421:SF21 4 364 2.1E-171 T 22-04-2016 JE55_RS07930 e8d6269ac33e609d56d39e92e9361235 364 SUPERFAMILY SSF52738 168 355 6.28E-76 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JE55_RS07930 e8d6269ac33e609d56d39e92e9361235 364 SUPERFAMILY SSF52172 3 109 1.21E-28 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS07930 e8d6269ac33e609d56d39e92e9361235 364 Gene3D G3DSA:3.40.50.2300 3 133 1.4E-28 T 22-04-2016 JE55_RS07930 e8d6269ac33e609d56d39e92e9361235 364 Gene3D G3DSA:3.40.50.180 168 355 1.7E-86 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 JE55_RS07930 e8d6269ac33e609d56d39e92e9361235 364 PANTHER PTHR24421 4 364 2.1E-171 T 22-04-2016 JE55_RS16400 ab53bc5cbe0d392aa1bb5e55b8090ab4 421 Pfam PF15984 Bacterial collagen, middle region 93 291 2.4E-65 T 22-04-2016 IPR031929 Bacterial collagen-like protein, middle domain JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 SUPERFAMILY SSF52518 388 582 6.66E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 PANTHER PTHR18968 1 582 0.0 T 22-04-2016 JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 PANTHER PTHR18968:SF116 1 582 0.0 T 22-04-2016 JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 SUPERFAMILY SSF52467 204 377 1.03E-63 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 23 581 6.9E-258 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 23 188 7.7E-58 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 Gene3D G3DSA:3.40.50.970 374 575 1.8E-77 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 410 558 2.5E-52 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 211 347 1.9E-44 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 Gene3D G3DSA:3.40.50.970 23 196 1.7E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 SUPERFAMILY SSF52518 23 197 8.16E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS14310 38f0c519b402bd4548cc9646914cda97 587 Gene3D G3DSA:3.40.50.1220 205 373 4.5E-64 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS02655 961209d31cc5a9b0cf96e49918b7b4c2 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 32 258 1.4E-63 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS02655 961209d31cc5a9b0cf96e49918b7b4c2 264 SUPERFAMILY SSF53850 8 259 3.07E-69 T 22-04-2016 JE55_RS02655 961209d31cc5a9b0cf96e49918b7b4c2 264 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 8 257 2.5E-81 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 JE55_RS02655 961209d31cc5a9b0cf96e49918b7b4c2 264 PANTHER PTHR18966 28 257 1.6E-72 T 22-04-2016 JE55_RS02655 961209d31cc5a9b0cf96e49918b7b4c2 264 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 54 67 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 JE55_RS02655 961209d31cc5a9b0cf96e49918b7b4c2 264 PANTHER PTHR18966:SF237 28 257 1.6E-72 T 22-04-2016 JE55_RS02655 961209d31cc5a9b0cf96e49918b7b4c2 264 SMART SM00062 31 260 7.3E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS02655 961209d31cc5a9b0cf96e49918b7b4c2 264 Gene3D G3DSA:3.40.190.10 30 117 5.8E-44 T 22-04-2016 JE55_RS02655 961209d31cc5a9b0cf96e49918b7b4c2 264 Gene3D G3DSA:3.40.190.10 219 260 5.8E-44 T 22-04-2016 JE55_RS02655 961209d31cc5a9b0cf96e49918b7b4c2 264 Gene3D G3DSA:3.40.190.10 118 215 8.5E-30 T 22-04-2016 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 Pfam PF07499 RuvA, C-terminal domain 148 191 4.4E-13 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 Gene3D G3DSA:1.10.150.20 68 133 1.9E-28 T 22-04-2016 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 PANTHER PTHR33796 2 193 6.1E-74 T 22-04-2016 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 Gene3D G3DSA:2.40.50.140 1 65 1.5E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS05565 0bdb19290112d4088a7658c826830010 193 SUPERFAMILY SSF50249 1 63 1.83E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS05565 0bdb19290112d4088a7658c826830010 193 SUPERFAMILY SSF46929 147 192 8.5E-9 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 191 30.97 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 SUPERFAMILY SSF47781 65 132 2.78E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 SMART SM00278 108 127 0.0016 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 SMART SM00278 73 92 6.8 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 185 5.4E-52 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 Pfam PF14520 Helix-hairpin-helix domain 72 129 1.8E-17 T 22-04-2016 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 Pfam PF01330 RuvA N terminal domain 1 62 1.1E-21 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 JE55_RS05565 0bdb19290112d4088a7658c826830010 193 Gene3D G3DSA:1.10.8.10 147 190 2.0E-7 T 22-04-2016 JE55_RS10350 452a716720e0280c5eba9b436e3b0e6d 528 PIRSF PIRSF002741 7 527 2.0E-115 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JE55_RS10350 452a716720e0280c5eba9b436e3b0e6d 528 PANTHER PTHR30290:SF14 6 528 1.7E-181 T 22-04-2016 JE55_RS10350 452a716720e0280c5eba9b436e3b0e6d 528 PANTHER PTHR30290 6 528 1.7E-181 T 22-04-2016 JE55_RS10350 452a716720e0280c5eba9b436e3b0e6d 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 65 445 2.0E-91 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain JE55_RS10350 452a716720e0280c5eba9b436e3b0e6d 528 Gene3D G3DSA:3.10.105.10 297 498 1.3E-65 T 22-04-2016 JE55_RS10350 452a716720e0280c5eba9b436e3b0e6d 528 SUPERFAMILY SSF53850 23 526 1.03E-143 T 22-04-2016 JE55_RS10350 452a716720e0280c5eba9b436e3b0e6d 528 Gene3D G3DSA:3.40.190.10 145 296 1.8E-43 T 22-04-2016 JE55_RS00610 c051ff958298ca0d436a5ee75f6e6f1d 212 PANTHER PTHR11080:SF2 1 206 1.3E-67 T 22-04-2016 JE55_RS00610 c051ff958298ca0d436a5ee75f6e6f1d 212 Gene3D G3DSA:3.40.50.850 1 207 6.0E-66 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 JE55_RS00610 c051ff958298ca0d436a5ee75f6e6f1d 212 PANTHER PTHR11080 1 206 1.3E-67 T 22-04-2016 JE55_RS00610 c051ff958298ca0d436a5ee75f6e6f1d 212 SUPERFAMILY SSF52499 5 207 2.35E-49 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 JE55_RS00610 c051ff958298ca0d436a5ee75f6e6f1d 212 Pfam PF00857 Isochorismatase family 7 199 4.3E-29 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 JE55_RS16525 b6ce67023a359adf18e66c0939962744 570 PANTHER PTHR11814 35 540 1.2E-117 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 JE55_RS16525 b6ce67023a359adf18e66c0939962744 570 Pfam PF00916 Sulfate permease family 35 381 4.6E-63 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 JE55_RS16525 b6ce67023a359adf18e66c0939962744 570 Gene3D G3DSA:3.30.750.24 451 540 1.4E-11 T 22-04-2016 IPR002645 STAS domain JE55_RS16525 b6ce67023a359adf18e66c0939962744 570 SUPERFAMILY SSF52091 450 540 3.73E-10 T 22-04-2016 IPR002645 STAS domain JE55_RS16525 b6ce67023a359adf18e66c0939962744 570 Pfam PF01740 STAS domain 450 540 2.8E-11 T 22-04-2016 IPR002645 STAS domain JE55_RS04580 4721c26bd45569d377e131ebbe135b18 615 Pfam PF00450 Serine carboxypeptidase 128 266 4.1E-15 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 JE55_RS04580 4721c26bd45569d377e131ebbe135b18 615 SUPERFAMILY SSF53474 401 585 2.08E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS04580 4721c26bd45569d377e131ebbe135b18 615 SUPERFAMILY SSF53474 111 353 2.08E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS04580 4721c26bd45569d377e131ebbe135b18 615 PANTHER PTHR11802:SF30 128 266 3.7E-13 T 22-04-2016 JE55_RS04580 4721c26bd45569d377e131ebbe135b18 615 PANTHER PTHR11802 128 266 3.7E-13 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 JE55_RS04580 4721c26bd45569d377e131ebbe135b18 615 Gene3D G3DSA:3.40.50.1820 387 393 9.4E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS04580 4721c26bd45569d377e131ebbe135b18 615 Gene3D G3DSA:3.40.50.1820 99 354 9.4E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS04580 4721c26bd45569d377e131ebbe135b18 615 Gene3D G3DSA:3.40.50.1820 441 568 9.4E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS02350 b75d704455301f548600d0e005ab4b98 458 SUPERFAMILY SSF53633 24 308 7.68E-67 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS02350 b75d704455301f548600d0e005ab4b98 458 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 29 458 3.4E-195 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 JE55_RS02350 b75d704455301f548600d0e005ab4b98 458 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 458 213.986 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 JE55_RS02350 b75d704455301f548600d0e005ab4b98 458 PANTHER PTHR30602 28 458 8.3E-167 T 22-04-2016 JE55_RS02350 b75d704455301f548600d0e005ab4b98 458 SUPERFAMILY SSF55729 314 435 1.6E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02350 b75d704455301f548600d0e005ab4b98 458 Pfam PF00696 Amino acid kinase family 47 283 3.8E-30 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS02350 b75d704455301f548600d0e005ab4b98 458 Gene3D G3DSA:3.40.630.30 313 457 3.5E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02350 b75d704455301f548600d0e005ab4b98 458 Pfam PF00583 Acetyltransferase (GNAT) family 357 429 1.1E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS02350 b75d704455301f548600d0e005ab4b98 458 Gene3D G3DSA:3.40.1160.10 44 306 5.4E-67 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 JE55_RS02350 b75d704455301f548600d0e005ab4b98 458 PIRSF PIRSF000423 19 458 7.7E-194 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 PANTHER PTHR24220 12 252 5.1E-117 T 22-04-2016 JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 PANTHER PTHR24220 269 294 5.1E-117 T 22-04-2016 JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 PANTHER PTHR24220 315 424 5.1E-117 T 22-04-2016 JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 Pfam PF00005 ABC transporter 31 170 1.5E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 Gene3D G3DSA:3.40.50.300 6 230 1.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 SUPERFAMILY SSF52540 11 250 1.46E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 PANTHER PTHR24220:SF589 12 252 5.1E-117 T 22-04-2016 JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 PANTHER PTHR24220:SF589 269 294 5.1E-117 T 22-04-2016 JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 PANTHER PTHR24220:SF589 315 424 5.1E-117 T 22-04-2016 JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 Pfam PF09821 C-terminal AAA-associated domain 305 420 5.8E-32 T 22-04-2016 IPR018632 C-terminal AAA-associated domain JE55_RS11960 394ef906ea61fb72e2dc5afd1af392f8 435 SMART SM00382 40 222 5.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS02790 9e139d5ea030090d1926d497103993e3 623 ProSitePatterns PS00211 ABC transporters family signature. 493 507 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS02790 9e139d5ea030090d1926d497103993e3 623 Pfam PF00664 ABC transporter transmembrane region 41 302 2.6E-13 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS02790 9e139d5ea030090d1926d497103993e3 623 SUPERFAMILY SSF90123 27 329 6.67E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS02790 9e139d5ea030090d1926d497103993e3 623 Pfam PF00005 ABC transporter 372 521 1.6E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS02790 9e139d5ea030090d1926d497103993e3 623 Gene3D G3DSA:3.40.50.300 356 585 4.5E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02790 9e139d5ea030090d1926d497103993e3 623 Gene3D G3DSA:1.20.1560.10 27 327 2.1E-33 T 22-04-2016 JE55_RS02790 9e139d5ea030090d1926d497103993e3 623 PANTHER PTHR24221 22 600 1.2E-177 T 22-04-2016 JE55_RS02790 9e139d5ea030090d1926d497103993e3 623 SMART SM00382 381 567 6.3E-20 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS02790 9e139d5ea030090d1926d497103993e3 623 SUPERFAMILY SSF52540 345 591 1.55E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS21265 bccc3add9ee93060d3c54fbe847afcc5 169 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 1 69 2.5E-28 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 JE55_RS21265 bccc3add9ee93060d3c54fbe847afcc5 169 SUPERFAMILY SSF53901 2 168 2.37E-31 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS21265 bccc3add9ee93060d3c54fbe847afcc5 169 PANTHER PTHR18919 1 169 5.1E-64 T 22-04-2016 JE55_RS21265 bccc3add9ee93060d3c54fbe847afcc5 169 PANTHER PTHR18919:SF109 1 169 5.1E-64 T 22-04-2016 JE55_RS21265 bccc3add9ee93060d3c54fbe847afcc5 169 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 115 169 5.0E-20 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 JE55_RS21265 bccc3add9ee93060d3c54fbe847afcc5 169 Gene3D G3DSA:3.40.47.10 47 169 1.9E-38 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS21265 bccc3add9ee93060d3c54fbe847afcc5 169 Gene3D G3DSA:3.40.47.10 1 46 6.6E-20 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS02785 057ad88be2d23beb25b3ed82c4ac73fa 354 SUPERFAMILY SSF53756 11 342 3.84E-59 T 22-04-2016 JE55_RS02785 057ad88be2d23beb25b3ed82c4ac73fa 354 Gene3D G3DSA:3.40.50.2000 171 309 1.4E-18 T 22-04-2016 JE55_RS02785 057ad88be2d23beb25b3ed82c4ac73fa 354 Pfam PF13439 Glycosyltransferase Family 4 18 119 3.4E-12 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JE55_RS02785 057ad88be2d23beb25b3ed82c4ac73fa 354 Pfam PF00534 Glycosyl transferases group 1 170 310 6.4E-26 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS02785 057ad88be2d23beb25b3ed82c4ac73fa 354 PANTHER PTHR12526 1 345 7.2E-43 T 22-04-2016 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 Hamap MF_00600 60 kDa chaperonin [groL]. 2 538 40.507 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 1.9E-98 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 PRINTS PR00298 60kDa chaperonin signature 350 375 6.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 PRINTS PR00298 60kDa chaperonin signature 268 291 6.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 PRINTS PR00298 60kDa chaperonin signature 83 110 6.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 PRINTS PR00298 60kDa chaperonin signature 398 419 6.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 PRINTS PR00298 60kDa chaperonin signature 27 53 6.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 SUPERFAMILY SSF48592 406 521 1.5E-77 T 22-04-2016 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 SUPERFAMILY SSF48592 7 134 1.5E-77 T 22-04-2016 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 PANTHER PTHR11353 3 532 2.1E-244 T 22-04-2016 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 Gene3D G3DSA:1.10.560.10 369 518 3.6E-43 T 22-04-2016 IPR027413 GroEL-like equatorial domain JE55_RS05675 3860b844a19151177e6f829af1314dea 539 Gene3D G3DSA:3.50.7.10 188 368 9.7E-93 T 22-04-2016 IPR027409 GroEL-like apical domain JE55_RS05675 3860b844a19151177e6f829af1314dea 539 SUPERFAMILY SSF52029 185 376 1.36E-77 T 22-04-2016 IPR027409 GroEL-like apical domain JE55_RS05675 3860b844a19151177e6f829af1314dea 539 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 2.7E-249 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 JE55_RS05675 3860b844a19151177e6f829af1314dea 539 Gene3D G3DSA:1.10.560.10 3 187 3.1E-48 T 22-04-2016 IPR027413 GroEL-like equatorial domain JE55_RS05675 3860b844a19151177e6f829af1314dea 539 SUPERFAMILY SSF54849 137 204 1.05E-24 T 22-04-2016 JE55_RS09560 af2d090ec902afe5756c38db2a5236dd 144 Pfam PF02561 Flagellar protein FliS 10 127 4.7E-35 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 JE55_RS09560 af2d090ec902afe5756c38db2a5236dd 144 Gene3D G3DSA:1.20.120.340 10 133 1.3E-40 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 JE55_RS09560 af2d090ec902afe5756c38db2a5236dd 144 TIGRFAM TIGR00208 fliS: flagellar protein FliS 8 126 4.1E-26 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 JE55_RS09560 af2d090ec902afe5756c38db2a5236dd 144 PIRSF PIRSF039090 5 138 1.4E-37 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 JE55_RS09560 af2d090ec902afe5756c38db2a5236dd 144 PANTHER PTHR34773 1 137 1.6E-35 T 22-04-2016 JE55_RS09560 af2d090ec902afe5756c38db2a5236dd 144 SUPERFAMILY SSF101116 11 130 5.89E-35 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 JE55_RS04900 98b76056af0502086141fc89a771de35 281 Pfam PF00793 DAHP synthetase I family 8 273 3.1E-66 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS04900 98b76056af0502086141fc89a771de35 281 Gene3D G3DSA:3.20.20.70 16 276 3.1E-105 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS04900 98b76056af0502086141fc89a771de35 281 SUPERFAMILY SSF51569 7 276 7.05E-103 T 22-04-2016 JE55_RS04900 98b76056af0502086141fc89a771de35 281 PANTHER PTHR21057:SF6 3 281 6.8E-174 T 22-04-2016 JE55_RS04900 98b76056af0502086141fc89a771de35 281 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 16 273 9.7E-115 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS04900 98b76056af0502086141fc89a771de35 281 PANTHER PTHR21057 3 281 6.8E-174 T 22-04-2016 JE55_RS04900 98b76056af0502086141fc89a771de35 281 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 11 275 48.14 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 SUPERFAMILY SSF51735 6 255 1.89E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 PANTHER PTHR24321 2 255 1.4E-57 T 22-04-2016 JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 PANTHER PTHR24321:SF6 2 255 1.4E-57 T 22-04-2016 JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 4.5E-66 T 22-04-2016 JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 154 0.0031 T 22-04-2016 JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 Gene3D G3DSA:3.40.50.720 2 254 9.8E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 4.2E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 4.2E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.2E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.4E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 4.4E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.4E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.4E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 4.4E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS05935 1f2de80e15443fb996ef75a198ec8221 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 4.4E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10470 33b7ba881f82774ecb1da209fee5f4fb 374 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 131 369 2.2E-65 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria JE55_RS10470 33b7ba881f82774ecb1da209fee5f4fb 374 PANTHER PTHR30188 38 372 5.9E-76 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 JE55_RS10470 33b7ba881f82774ecb1da209fee5f4fb 374 Pfam PF02405 Permease MlaE 158 366 2.2E-65 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 JE55_RS10470 33b7ba881f82774ecb1da209fee5f4fb 374 PANTHER PTHR30188:SF3 38 372 5.9E-76 T 22-04-2016 JE55_RS11915 852f19e92d112e67dc3f981ff64ecabe 193 Pfam PF13628 Domain of unknown function (DUF4142) 48 181 3.8E-33 T 22-04-2016 IPR025419 Domain of unknown function DUF4142 JE55_RS00880 ce6ee4ebc55ac1f6e8783b499bb08348 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 104 111 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS00880 ce6ee4ebc55ac1f6e8783b499bb08348 236 Gene3D G3DSA:3.90.550.10 4 231 1.2E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS00880 ce6ee4ebc55ac1f6e8783b499bb08348 236 SUPERFAMILY SSF53448 5 229 6.76E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS00880 ce6ee4ebc55ac1f6e8783b499bb08348 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 230 3.6E-61 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS00880 ce6ee4ebc55ac1f6e8783b499bb08348 236 PANTHER PTHR32125 7 231 2.4E-64 T 22-04-2016 JE55_RS00880 ce6ee4ebc55ac1f6e8783b499bb08348 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 229 1.7E-66 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS00880 ce6ee4ebc55ac1f6e8783b499bb08348 236 PANTHER PTHR32125:SF4 7 231 2.4E-64 T 22-04-2016 JE55_RS00880 ce6ee4ebc55ac1f6e8783b499bb08348 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 232 30.404 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS07925 6cb7101ab4266de6c451a62f54064cb4 131 Gene3D G3DSA:3.40.50.2300 2 126 2.2E-38 T 22-04-2016 JE55_RS07925 6cb7101ab4266de6c451a62f54064cb4 131 PANTHER PTHR26402 5 128 8.4E-41 T 22-04-2016 JE55_RS07925 6cb7101ab4266de6c451a62f54064cb4 131 Pfam PF00072 Response regulator receiver domain 7 119 2.8E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS07925 6cb7101ab4266de6c451a62f54064cb4 131 SMART SM00448 5 119 4.7E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS07925 6cb7101ab4266de6c451a62f54064cb4 131 SUPERFAMILY SSF52172 4 125 8.97E-37 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS04030 30cf65662ebdb59a46abec2f0140fba0 285 PANTHER PTHR32243 1 285 2.4E-126 T 22-04-2016 JE55_RS04030 30cf65662ebdb59a46abec2f0140fba0 285 SUPERFAMILY SSF161098 8 285 1.03E-61 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS04030 30cf65662ebdb59a46abec2f0140fba0 285 Gene3D G3DSA:1.10.3720.10 6 270 7.4E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS04030 30cf65662ebdb59a46abec2f0140fba0 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 278 1.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS04030 30cf65662ebdb59a46abec2f0140fba0 285 PANTHER PTHR32243:SF23 1 285 2.4E-126 T 22-04-2016 JE55_RS10455 a6252181a3b4a8a7e8141374cd0e011f 319 Pfam PF02237 Biotin protein ligase C terminal domain 268 313 1.6E-9 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 JE55_RS10455 a6252181a3b4a8a7e8141374cd0e011f 319 Gene3D G3DSA:3.30.930.10 25 263 3.3E-42 T 22-04-2016 JE55_RS10455 a6252181a3b4a8a7e8141374cd0e011f 319 PANTHER PTHR12835 15 313 1.2E-37 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 JE55_RS10455 a6252181a3b4a8a7e8141374cd0e011f 319 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 191 7.6E-6 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 JE55_RS10455 a6252181a3b4a8a7e8141374cd0e011f 319 Gene3D G3DSA:2.30.30.100 266 313 7.1E-15 T 22-04-2016 JE55_RS10455 a6252181a3b4a8a7e8141374cd0e011f 319 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 36 313 5.5E-29 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 JE55_RS10455 a6252181a3b4a8a7e8141374cd0e011f 319 SUPERFAMILY SSF55681 26 264 1.39E-34 T 22-04-2016 JE55_RS10455 a6252181a3b4a8a7e8141374cd0e011f 319 SUPERFAMILY SSF50037 268 313 1.01E-7 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal JE55_RS26535 59eb4d66e4f406c1ea188c05893f090a 255 Gene3D G3DSA:3.40.190.10 46 130 5.2E-22 T 22-04-2016 JE55_RS26535 59eb4d66e4f406c1ea188c05893f090a 255 PANTHER PTHR30537 1 252 1.1E-76 T 22-04-2016 JE55_RS26535 59eb4d66e4f406c1ea188c05893f090a 255 Gene3D G3DSA:1.10.10.10 1 40 3.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS26535 59eb4d66e4f406c1ea188c05893f090a 255 Gene3D G3DSA:3.40.190.10 131 214 4.5E-22 T 22-04-2016 JE55_RS26535 59eb4d66e4f406c1ea188c05893f090a 255 Pfam PF03466 LysR substrate binding domain 42 251 3.5E-42 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS26535 59eb4d66e4f406c1ea188c05893f090a 255 SUPERFAMILY SSF53850 42 253 4.71E-45 T 22-04-2016 JE55_RS02840 8aaf80bf6bccd7cc94073cc8e20a7d07 313 Pfam PF12686 Protein of unknown function (DUF3800) 4 212 3.3E-18 T 22-04-2016 IPR024524 Protein of unknown function DUF3800 JE55_RS07000 0368521739e10e2f2d063b2071247dd1 356 SUPERFAMILY SSF53383 10 352 1.26E-73 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS07000 0368521739e10e2f2d063b2071247dd1 356 Gene3D G3DSA:3.40.640.10 44 255 1.3E-60 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS07000 0368521739e10e2f2d063b2071247dd1 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 10 352 1.0E-94 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 JE55_RS07000 0368521739e10e2f2d063b2071247dd1 356 Gene3D G3DSA:3.90.1150.10 256 352 4.9E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS07000 0368521739e10e2f2d063b2071247dd1 356 PANTHER PTHR11751:SF398 7 352 1.5E-61 T 22-04-2016 JE55_RS07000 0368521739e10e2f2d063b2071247dd1 356 Pfam PF00155 Aminotransferase class I and II 49 351 1.1E-45 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS07000 0368521739e10e2f2d063b2071247dd1 356 PANTHER PTHR11751 7 352 1.5E-61 T 22-04-2016 JE55_RS07000 0368521739e10e2f2d063b2071247dd1 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 355 54.205 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 JE55_RS00950 5fb431a954d8110155a661156bfaee18 69 SUPERFAMILY SSF89807 5 68 3.14E-26 T 22-04-2016 IPR009923 Dodecin JE55_RS00950 5fb431a954d8110155a661156bfaee18 69 Pfam PF07311 Dodecin 5 68 4.3E-30 T 22-04-2016 IPR009923 Dodecin JE55_RS00950 5fb431a954d8110155a661156bfaee18 69 PANTHER PTHR39324:SF1 1 69 7.2E-22 T 22-04-2016 JE55_RS00950 5fb431a954d8110155a661156bfaee18 69 Gene3D G3DSA:3.30.1660.10 2 69 1.4E-36 T 22-04-2016 IPR025543 Dodecin-like JE55_RS00950 5fb431a954d8110155a661156bfaee18 69 PANTHER PTHR39324 1 69 7.2E-22 T 22-04-2016 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 SUPERFAMILY SSF47413 1 85 2.19E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 SMART SM01116 83 156 5.6E-46 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 PANTHER PTHR34186:SF2 1 156 4.7E-69 T 22-04-2016 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 Gene3D G3DSA:1.10.260.40 1 87 1.1E-32 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 Pfam PF02560 Cyanate lyase C-terminal domain 88 154 1.8E-32 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 PRINTS PR01693 Cyanase signature 109 125 6.3E-33 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 PRINTS PR01693 Cyanase signature 42 59 6.3E-33 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 PRINTS PR01693 Cyanase signature 91 105 6.3E-33 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 PRINTS PR01693 Cyanase signature 141 151 6.3E-33 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 PRINTS PR01693 Cyanase signature 22 37 6.3E-33 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 TIGRFAM TIGR00673 cynS: cyanase 8 156 8.3E-60 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 PIRSF PIRSF001263 3 156 7.2E-62 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 SUPERFAMILY SSF55234 88 155 6.28E-29 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 Hamap MF_00535 Cyanate hydratase [cynS]. 1 156 81.597 T 22-04-2016 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 Gene3D G3DSA:3.30.1160.10 89 156 6.4E-36 T 22-04-2016 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 JE55_RS05835 140b01c71db2325c9fc331aa9c3aff97 156 PANTHER PTHR34186 1 156 4.7E-69 T 22-04-2016 JE55_RS13025 a252221c78a2564e9e1cc3d28af7faf3 229 Pfam PF03473 MOSC domain 51 164 9.4E-27 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 JE55_RS13025 a252221c78a2564e9e1cc3d28af7faf3 229 Gene3D G3DSA:2.40.33.20 3 229 1.5E-92 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like JE55_RS13025 a252221c78a2564e9e1cc3d28af7faf3 229 SUPERFAMILY SSF50800 4 229 1.2E-79 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain JE55_RS13025 a252221c78a2564e9e1cc3d28af7faf3 229 PANTHER PTHR30212:SF2 26 229 1.1E-76 T 22-04-2016 JE55_RS13025 a252221c78a2564e9e1cc3d28af7faf3 229 PANTHER PTHR30212 26 229 1.1E-76 T 22-04-2016 JE55_RS13025 a252221c78a2564e9e1cc3d28af7faf3 229 Pfam PF03475 3-alpha domain 175 216 9.3E-14 T 22-04-2016 IPR005163 3-alpha domain JE55_RS17015 9cfdba5177da6aca68343f0778a0fd15 363 SUPERFAMILY SSF51735 162 320 8.55E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS17015 9cfdba5177da6aca68343f0778a0fd15 363 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 152 9.4E-27 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JE55_RS17015 9cfdba5177da6aca68343f0778a0fd15 363 SUPERFAMILY SSF50129 9 194 6.51E-42 T 22-04-2016 IPR011032 GroES-like JE55_RS17015 9cfdba5177da6aca68343f0778a0fd15 363 Gene3D G3DSA:3.40.50.720 187 307 1.5E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS17015 9cfdba5177da6aca68343f0778a0fd15 363 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 75 89 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 JE55_RS17015 9cfdba5177da6aca68343f0778a0fd15 363 Gene3D G3DSA:3.90.180.10 4 186 1.0E-46 T 22-04-2016 IPR011032 GroES-like JE55_RS17015 9cfdba5177da6aca68343f0778a0fd15 363 PANTHER PTHR11695 22 362 2.8E-162 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 JE55_RS17015 9cfdba5177da6aca68343f0778a0fd15 363 PANTHER PTHR11695:SF581 22 362 2.8E-162 T 22-04-2016 JE55_RS17015 9cfdba5177da6aca68343f0778a0fd15 363 Pfam PF00107 Zinc-binding dehydrogenase 195 322 7.2E-21 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JE55_RS13445 3427d241ca41913b8d70f63ea2f298ff 229 PANTHER PTHR30133:SF1 2 229 9.8E-140 T 22-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 JE55_RS13445 3427d241ca41913b8d70f63ea2f298ff 229 PANTHER PTHR30133 2 229 9.8E-140 T 22-04-2016 JE55_RS13445 3427d241ca41913b8d70f63ea2f298ff 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 220 3.6E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS13445 3427d241ca41913b8d70f63ea2f298ff 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 7.4E-19 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 JE55_RS13445 3427d241ca41913b8d70f63ea2f298ff 229 Gene3D G3DSA:1.10.3720.10 8 220 1.4E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS13445 3427d241ca41913b8d70f63ea2f298ff 229 SUPERFAMILY SSF161098 8 206 3.71E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS02170 e143a0be99011a410f0b6ccbc348ac25 407 Pfam PF00266 Aminotransferase class-V 10 372 9.1E-90 T 22-04-2016 IPR000192 Aminotransferase class V domain JE55_RS02170 e143a0be99011a410f0b6ccbc348ac25 407 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 200 219 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JE55_RS02170 e143a0be99011a410f0b6ccbc348ac25 407 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 8 407 3.5E-231 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 JE55_RS02170 e143a0be99011a410f0b6ccbc348ac25 407 PANTHER PTHR11601:SF34 2 407 9.9E-238 T 22-04-2016 JE55_RS02170 e143a0be99011a410f0b6ccbc348ac25 407 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 6 398 55.394 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 JE55_RS02170 e143a0be99011a410f0b6ccbc348ac25 407 SUPERFAMILY SSF53383 10 394 1.34E-114 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS02170 e143a0be99011a410f0b6ccbc348ac25 407 Gene3D G3DSA:3.90.1150.10 257 377 5.6E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS02170 e143a0be99011a410f0b6ccbc348ac25 407 PIRSF PIRSF005572 7 387 3.0E-134 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 JE55_RS02170 e143a0be99011a410f0b6ccbc348ac25 407 Gene3D G3DSA:3.40.640.10 22 256 6.4E-102 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS02170 e143a0be99011a410f0b6ccbc348ac25 407 PANTHER PTHR11601 2 407 9.9E-238 T 22-04-2016 JE55_RS01100 06fb2da049a6f62b3c31c20b82399309 245 PANTHER PTHR33447 27 236 3.3E-62 T 22-04-2016 JE55_RS01100 06fb2da049a6f62b3c31c20b82399309 245 SUPERFAMILY SSF54001 28 236 2.16E-63 T 22-04-2016 JE55_RS01100 06fb2da049a6f62b3c31c20b82399309 245 Pfam PF05023 Phytochelatin synthase 25 236 1.5E-66 T 22-04-2016 IPR007719 Phytochelatin synthase GO:0010038|GO:0016756|GO:0046872|GO:0046938 MetaCyc: PWY-6745 JE55_RS03565 69a9442bf189232b5f7dce68afbec17c 330 PANTHER PTHR10366:SF469 2 265 3.6E-98 T 22-04-2016 JE55_RS03565 69a9442bf189232b5f7dce68afbec17c 330 PANTHER PTHR10366:SF469 281 326 3.6E-98 T 22-04-2016 JE55_RS03565 69a9442bf189232b5f7dce68afbec17c 330 Gene3D G3DSA:3.40.50.720 1 170 1.5E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS03565 69a9442bf189232b5f7dce68afbec17c 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 241 9.2E-45 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 JE55_RS03565 69a9442bf189232b5f7dce68afbec17c 330 PANTHER PTHR10366 2 265 3.6E-98 T 22-04-2016 JE55_RS03565 69a9442bf189232b5f7dce68afbec17c 330 PANTHER PTHR10366 281 326 3.6E-98 T 22-04-2016 JE55_RS03565 69a9442bf189232b5f7dce68afbec17c 330 Gene3D G3DSA:3.90.25.10 171 311 2.3E-34 T 22-04-2016 JE55_RS03565 69a9442bf189232b5f7dce68afbec17c 330 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 3 327 1.1E-133 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 JE55_RS03565 69a9442bf189232b5f7dce68afbec17c 330 SUPERFAMILY SSF51735 1 327 2.93E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS03565 69a9442bf189232b5f7dce68afbec17c 330 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 2 329 59.499 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 JE55_RS00290 1b1be751d1a19873417fa23d2d79a1c9 164 SMART SM00422 13 82 1.1E-25 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS00290 1b1be751d1a19873417fa23d2d79a1c9 164 PANTHER PTHR30204 5 143 9.8E-45 T 22-04-2016 JE55_RS00290 1b1be751d1a19873417fa23d2d79a1c9 164 SUPERFAMILY SSF46955 13 126 5.86E-33 T 22-04-2016 IPR009061 Putative DNA-binding domain JE55_RS00290 1b1be751d1a19873417fa23d2d79a1c9 164 ProSitePatterns PS00552 MerR-type HTH domain signature. 16 38 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS00290 1b1be751d1a19873417fa23d2d79a1c9 164 Gene3D G3DSA:1.10.1660.10 13 131 1.3E-34 T 22-04-2016 JE55_RS00290 1b1be751d1a19873417fa23d2d79a1c9 164 Pfam PF13411 MerR HTH family regulatory protein 14 76 4.2E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS00290 1b1be751d1a19873417fa23d2d79a1c9 164 PANTHER PTHR30204:SF2 5 143 9.8E-45 T 22-04-2016 JE55_RS00290 1b1be751d1a19873417fa23d2d79a1c9 164 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 25 38 4.0E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS00290 1b1be751d1a19873417fa23d2d79a1c9 164 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 25 4.0E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS00290 1b1be751d1a19873417fa23d2d79a1c9 164 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 49 69 4.0E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS13300 06d011af5b0ce52c6e835afa6488e8a5 189 SUPERFAMILY SSF51283 3 188 1.15E-52 T 22-04-2016 IPR029054 dUTPase-like JE55_RS13300 06d011af5b0ce52c6e835afa6488e8a5 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 188 1.2E-48 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 JE55_RS13300 06d011af5b0ce52c6e835afa6488e8a5 189 PANTHER PTHR11241 1 188 4.5E-78 T 22-04-2016 JE55_RS13300 06d011af5b0ce52c6e835afa6488e8a5 189 Pfam PF00692 dUTPase 83 184 2.4E-5 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 JE55_RS13300 06d011af5b0ce52c6e835afa6488e8a5 189 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 189 28.375 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 JE55_RS13300 06d011af5b0ce52c6e835afa6488e8a5 189 Gene3D G3DSA:2.70.40.10 3 188 1.8E-67 T 22-04-2016 IPR029054 dUTPase-like JE55_RS13300 06d011af5b0ce52c6e835afa6488e8a5 189 PANTHER PTHR11241:SF1 1 188 4.5E-78 T 22-04-2016 JE55_RS02660 a180424f8b715840925f333566b2f0df 147 PANTHER PTHR11260:SF154 1 141 2.4E-31 T 22-04-2016 JE55_RS02660 a180424f8b715840925f333566b2f0df 147 PANTHER PTHR11260 1 141 2.4E-31 T 22-04-2016 JE55_RS02660 a180424f8b715840925f333566b2f0df 147 SUPERFAMILY SSF47616 26 143 3.41E-23 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS02660 a180424f8b715840925f333566b2f0df 147 Pfam PF00043 Glutathione S-transferase, C-terminal domain 58 133 2.7E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal JE55_RS02660 a180424f8b715840925f333566b2f0df 147 Gene3D G3DSA:1.20.1050.10 28 133 1.9E-35 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS13215 dee657ea8f44b4f870c6943ea5ecf378 314 Pfam PF03186 CobD/Cbib protein 14 290 1.6E-86 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 JE55_RS13215 dee657ea8f44b4f870c6943ea5ecf378 314 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 312 101.749 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 JE55_RS13215 dee657ea8f44b4f870c6943ea5ecf378 314 PANTHER PTHR34308:SF1 1 313 2.5E-89 T 22-04-2016 JE55_RS13215 dee657ea8f44b4f870c6943ea5ecf378 314 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 16 301 3.5E-52 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 JE55_RS13215 dee657ea8f44b4f870c6943ea5ecf378 314 PANTHER PTHR34308 1 313 2.5E-89 T 22-04-2016 JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 SUPERFAMILY SSF55347 140 305 6.47E-53 T 22-04-2016 JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 Pfam PF01842 ACT domain 357 423 1.3E-12 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 SUPERFAMILY SSF55021 355 430 5.66E-11 T 22-04-2016 JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 PANTHER PTHR21499 1 372 2.9E-130 T 22-04-2016 JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 PANTHER PTHR21499:SF2 1 372 2.9E-130 T 22-04-2016 JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 PIRSF PIRSF000098 1 441 1.2E-162 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 Gene3D G3DSA:3.30.70.260 357 430 7.8E-10 T 22-04-2016 JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 186 208 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 Gene3D G3DSA:3.30.360.10 152 302 1.1E-57 T 22-04-2016 JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 132 9.6E-19 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 SUPERFAMILY SSF51735 1 161 8.71E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 Gene3D G3DSA:3.40.50.720 1 151 1.8E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00340 a8f02188b15ae73ff1c4905e8e215304 442 Pfam PF00742 Homoserine dehydrogenase 140 318 3.4E-66 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 JE55_RS16520 e11628fbbebdaac0509648733d60ab19 208 Gene3D G3DSA:1.10.8.10 135 195 1.2E-17 T 22-04-2016 JE55_RS16520 e11628fbbebdaac0509648733d60ab19 208 PIRSF PIRSF029669 1 206 9.7E-89 T 22-04-2016 IPR016932 Uncharacterised conserved protein UCP029669 JE55_RS16520 e11628fbbebdaac0509648733d60ab19 208 Pfam PF08857 Putative ParB-like nuclease 12 166 1.9E-52 T 22-04-2016 IPR014956 Putative ParB-like nuclease JE55_RS16520 e11628fbbebdaac0509648733d60ab19 208 Gene3D G3DSA:3.90.1530.10 7 134 3.3E-46 T 22-04-2016 JE55_RS16520 e11628fbbebdaac0509648733d60ab19 208 SUPERFAMILY SSF110849 6 202 3.03E-71 T 22-04-2016 IPR003115 ParB/Sulfiredoxin JE55_RS05540 c7d8b316e797bc973096699b0219e6ce 354 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 JE55_RS05540 c7d8b316e797bc973096699b0219e6ce 354 SUPERFAMILY SSF51395 11 324 2.49E-87 T 22-04-2016 JE55_RS05540 c7d8b316e797bc973096699b0219e6ce 354 Pfam PF01207 Dihydrouridine synthase (Dus) 15 325 1.6E-103 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JE55_RS05540 c7d8b316e797bc973096699b0219e6ce 354 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 5 325 4.2E-120 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 JE55_RS05540 c7d8b316e797bc973096699b0219e6ce 354 PANTHER PTHR11082 5 345 1.6E-134 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JE55_RS05540 c7d8b316e797bc973096699b0219e6ce 354 PANTHER PTHR11082:SF25 5 345 1.6E-134 T 22-04-2016 JE55_RS05540 c7d8b316e797bc973096699b0219e6ce 354 Gene3D G3DSA:3.20.20.70 9 249 1.5E-81 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS05540 c7d8b316e797bc973096699b0219e6ce 354 PIRSF PIRSF006621 4 333 9.7E-104 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 JE55_RS05540 c7d8b316e797bc973096699b0219e6ce 354 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 2 327 50.074 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 JE55_RS05540 c7d8b316e797bc973096699b0219e6ce 354 Gene3D G3DSA:1.10.1200.80 258 331 8.3E-27 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 JE55_RS10475 91c4929312bb57ea06488c4946bbc661 280 SMART SM00382 34 226 1.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS10475 91c4929312bb57ea06488c4946bbc661 280 PANTHER PTHR24220 11 250 5.2E-109 T 22-04-2016 JE55_RS10475 91c4929312bb57ea06488c4946bbc661 280 SUPERFAMILY SSF52540 8 234 9.32E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10475 91c4929312bb57ea06488c4946bbc661 280 Gene3D G3DSA:3.40.50.300 9 234 3.8E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10475 91c4929312bb57ea06488c4946bbc661 280 PANTHER PTHR24220:SF483 11 250 5.2E-109 T 22-04-2016 JE55_RS10475 91c4929312bb57ea06488c4946bbc661 280 Pfam PF00005 ABC transporter 27 175 1.5E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 SUPERFAMILY SSF56954 89 505 7.59E-99 T 22-04-2016 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 SUPERFAMILY SSF56954 31 66 7.59E-99 T 22-04-2016 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 PANTHER PTHR30203 21 522 1.1E-131 T 22-04-2016 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 Pfam PF02321 Outer membrane efflux protein 98 290 3.6E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 Pfam PF02321 Outer membrane efflux protein 316 501 2.3E-17 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 Gene3D G3DSA:2.20.200.10 134 177 1.4E-13 T 22-04-2016 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 Gene3D G3DSA:2.20.200.10 351 388 1.4E-13 T 22-04-2016 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 Gene3D G3DSA:1.20.1600.10 84 124 5.9E-86 T 22-04-2016 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 Gene3D G3DSA:1.20.1600.10 390 503 5.9E-86 T 22-04-2016 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 Gene3D G3DSA:1.20.1600.10 178 350 5.9E-86 T 22-04-2016 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 43 503 9.3E-116 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 JE55_RS16030 15d90d810b5a46a8db6b04e8360d1dd8 625 PANTHER PTHR30203:SF3 21 522 1.1E-131 T 22-04-2016 JE55_RS07850 cad9073e760edeedea99525e71059e9b 366 Gene3D G3DSA:3.20.20.70 8 333 1.1E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS07850 cad9073e760edeedea99525e71059e9b 366 PANTHER PTHR32332 5 85 2.0E-117 T 22-04-2016 JE55_RS07850 cad9073e760edeedea99525e71059e9b 366 PANTHER PTHR32332 112 360 2.0E-117 T 22-04-2016 JE55_RS07850 cad9073e760edeedea99525e71059e9b 366 Pfam PF03060 Nitronate monooxygenase 16 348 5.7E-76 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JE55_RS07850 cad9073e760edeedea99525e71059e9b 366 PANTHER PTHR32332:SF12 5 85 2.0E-117 T 22-04-2016 JE55_RS07850 cad9073e760edeedea99525e71059e9b 366 PANTHER PTHR32332:SF12 112 360 2.0E-117 T 22-04-2016 JE55_RS07850 cad9073e760edeedea99525e71059e9b 366 SUPERFAMILY SSF51412 8 362 2.59E-58 T 22-04-2016 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 Pfam PF00231 ATP synthase 4 290 1.8E-88 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 Gene3D G3DSA:1.10.287.80 19 60 3.4E-41 T 22-04-2016 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 Gene3D G3DSA:1.10.287.80 206 239 3.4E-41 T 22-04-2016 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 Gene3D G3DSA:3.40.1380.10 64 193 9.7E-39 T 22-04-2016 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 291 4.8E-104 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 291 35.277 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 1.3E-33 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 1.3E-33 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 PRINTS PR00126 ATP synthase gamma subunit signature 238 257 1.3E-33 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 PRINTS PR00126 ATP synthase gamma subunit signature 269 290 1.3E-33 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 PANTHER PTHR11693 1 291 3.0E-112 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 SUPERFAMILY SSF52943 2 291 2.49E-92 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 277 290 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site JE55_RS08425 86decf89e03ac804a92ee31726cd7457 291 Gene3D G3DSA:1.10.287.80 240 286 1.5E-28 T 22-04-2016 JE55_RS04505 dfe7bbbab51ee50ab31016685f0a154e 335 SUPERFAMILY SSF50129 1 160 4.11E-33 T 22-04-2016 IPR011032 GroES-like JE55_RS04505 dfe7bbbab51ee50ab31016685f0a154e 335 SMART SM00829 10 333 3.3E-22 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 JE55_RS04505 dfe7bbbab51ee50ab31016685f0a154e 335 Gene3D G3DSA:3.40.50.720 167 284 2.6E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04505 dfe7bbbab51ee50ab31016685f0a154e 335 SUPERFAMILY SSF51735 135 311 2.71E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04505 dfe7bbbab51ee50ab31016685f0a154e 335 PANTHER PTHR11695:SF525 15 335 6.1E-136 T 22-04-2016 JE55_RS04505 dfe7bbbab51ee50ab31016685f0a154e 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 89 1.7E-6 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 JE55_RS04505 dfe7bbbab51ee50ab31016685f0a154e 335 Gene3D G3DSA:3.90.180.10 1 166 2.5E-33 T 22-04-2016 IPR011032 GroES-like JE55_RS04505 dfe7bbbab51ee50ab31016685f0a154e 335 PANTHER PTHR11695 15 335 6.1E-136 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 JE55_RS04505 dfe7bbbab51ee50ab31016685f0a154e 335 Pfam PF00107 Zinc-binding dehydrogenase 170 289 4.5E-32 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 Pfam PF02321 Outer membrane efflux protein 350 529 7.5E-29 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 Pfam PF02321 Outer membrane efflux protein 92 319 1.1E-45 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 PANTHER PTHR30203:SF3 11 51 6.5E-133 T 22-04-2016 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 PANTHER PTHR30203:SF3 71 146 6.5E-133 T 22-04-2016 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 PANTHER PTHR30203:SF3 169 550 6.5E-133 T 22-04-2016 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 188 531 1.2E-95 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 SUPERFAMILY SSF56954 182 535 4.45E-110 T 22-04-2016 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 SUPERFAMILY SSF56954 83 143 4.45E-110 T 22-04-2016 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 SUPERFAMILY SSF56954 3 35 4.45E-110 T 22-04-2016 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 PANTHER PTHR30203 11 51 6.5E-133 T 22-04-2016 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 PANTHER PTHR30203 71 146 6.5E-133 T 22-04-2016 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 PANTHER PTHR30203 169 550 6.5E-133 T 22-04-2016 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 Gene3D G3DSA:1.20.1600.10 190 534 9.2E-122 T 22-04-2016 JE55_RS15770 a828a352b16ff84f95b914a625e0688e 563 Gene3D G3DSA:1.20.1600.10 79 151 9.2E-122 T 22-04-2016 JE55_RS18160 ea11b8261ea2f4794b353be725a066f8 294 SUPERFAMILY SSF56281 6 293 7.85E-48 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS18160 ea11b8261ea2f4794b353be725a066f8 294 Pfam PF00753 Metallo-beta-lactamase superfamily 15 212 4.0E-17 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS18160 ea11b8261ea2f4794b353be725a066f8 294 PANTHER PTHR11935 1 294 2.3E-106 T 22-04-2016 JE55_RS18160 ea11b8261ea2f4794b353be725a066f8 294 PANTHER PTHR11935:SF110 1 294 2.3E-106 T 22-04-2016 JE55_RS18160 ea11b8261ea2f4794b353be725a066f8 294 Gene3D G3DSA:3.60.15.10 6 258 4.3E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS18160 ea11b8261ea2f4794b353be725a066f8 294 SMART SM00849 12 212 3.9E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS03050 156731decf10224506e51d2cbed526f2 399 Pfam PF00589 Phage integrase family 224 389 4.1E-14 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS03050 156731decf10224506e51d2cbed526f2 399 SUPERFAMILY SSF56349 94 396 7.65E-29 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS03050 156731decf10224506e51d2cbed526f2 399 Gene3D G3DSA:1.10.150.130 107 149 3.1E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal JE55_RS03050 156731decf10224506e51d2cbed526f2 399 Gene3D G3DSA:1.10.443.10 217 396 1.2E-22 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS17315 275b5f6f0e97301b009d44b0fd921e98 256 PANTHER PTHR10108:SF877 14 226 9.9E-35 T 22-04-2016 JE55_RS17315 275b5f6f0e97301b009d44b0fd921e98 256 PANTHER PTHR10108 14 226 9.9E-35 T 22-04-2016 JE55_RS17315 275b5f6f0e97301b009d44b0fd921e98 256 SUPERFAMILY SSF53335 44 231 3.07E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS17315 275b5f6f0e97301b009d44b0fd921e98 256 Pfam PF13649 Methyltransferase domain 57 148 9.2E-19 T 22-04-2016 JE55_RS17315 275b5f6f0e97301b009d44b0fd921e98 256 Gene3D G3DSA:3.40.50.150 45 227 1.8E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS07015 cd40c909ea20021bf1976bed66b7327c 449 Gene3D G3DSA:3.65.10.10 50 248 1.5E-68 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS07015 cd40c909ea20021bf1976bed66b7327c 449 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 30 444 46.33 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS07015 cd40c909ea20021bf1976bed66b7327c 449 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 31 443 2.8E-174 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS07015 cd40c909ea20021bf1976bed66b7327c 449 Gene3D G3DSA:3.65.10.10 249 444 9.8E-57 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS07015 cd40c909ea20021bf1976bed66b7327c 449 PANTHER PTHR21090 31 448 3.6E-188 T 22-04-2016 JE55_RS07015 cd40c909ea20021bf1976bed66b7327c 449 SUPERFAMILY SSF55205 31 445 5.89E-138 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JE55_RS07015 cd40c909ea20021bf1976bed66b7327c 449 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 36 434 1.1E-105 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS09180 2d0e905f97f7bb2b9c5973a1917ee435 134 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 131 1.3E-14 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain JE55_RS09180 2d0e905f97f7bb2b9c5973a1917ee435 134 PANTHER PTHR21660:SF7 28 134 3.7E-26 T 22-04-2016 JE55_RS09180 2d0e905f97f7bb2b9c5973a1917ee435 134 PANTHER PTHR21660 28 134 3.7E-26 T 22-04-2016 JE55_RS09180 2d0e905f97f7bb2b9c5973a1917ee435 134 SUPERFAMILY SSF54637 14 133 1.55E-28 T 22-04-2016 IPR029069 HotDog domain JE55_RS09180 2d0e905f97f7bb2b9c5973a1917ee435 134 Gene3D G3DSA:3.10.129.10 15 133 2.7E-41 T 22-04-2016 IPR029069 HotDog domain JE55_RS09180 2d0e905f97f7bb2b9c5973a1917ee435 134 Pfam PF03061 Thioesterase superfamily 48 121 3.0E-15 T 22-04-2016 IPR006683 Thioesterase domain JE55_RS22695 f0092855201aa17cf6f96bd7e8f1e898 108 Gene3D G3DSA:3.60.15.10 11 106 9.3E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS22695 f0092855201aa17cf6f96bd7e8f1e898 108 PANTHER PTHR11935 1 104 1.5E-18 T 22-04-2016 JE55_RS22695 f0092855201aa17cf6f96bd7e8f1e898 108 SUPERFAMILY SSF56281 9 105 1.34E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS22695 f0092855201aa17cf6f96bd7e8f1e898 108 PANTHER PTHR11935:SF5 1 104 1.5E-18 T 22-04-2016 JE55_RS12450 5a3d1b9326a0d66c6f1a7c66e0bbb8ea 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 280 6.6E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS12450 5a3d1b9326a0d66c6f1a7c66e0bbb8ea 288 Gene3D G3DSA:1.10.3720.10 25 276 8.2E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS12450 5a3d1b9326a0d66c6f1a7c66e0bbb8ea 288 PANTHER PTHR32243 15 288 2.8E-114 T 22-04-2016 JE55_RS12450 5a3d1b9326a0d66c6f1a7c66e0bbb8ea 288 SUPERFAMILY SSF161098 24 288 1.03E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS12450 5a3d1b9326a0d66c6f1a7c66e0bbb8ea 288 PANTHER PTHR32243:SF11 15 288 2.8E-114 T 22-04-2016 JE55_RS10900 72008b6b870055c51358e0764af80e9a 623 Gene3D G3DSA:2.40.110.10 165 278 9.6E-21 T 22-04-2016 JE55_RS10900 72008b6b870055c51358e0764af80e9a 623 Gene3D G3DSA:1.20.140.10 279 474 8.4E-40 T 22-04-2016 JE55_RS10900 72008b6b870055c51358e0764af80e9a 623 PANTHER PTHR10909 4 488 8.0E-73 T 22-04-2016 JE55_RS10900 72008b6b870055c51358e0764af80e9a 623 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 299 466 4.1E-19 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS10900 72008b6b870055c51358e0764af80e9a 623 SUPERFAMILY SSF56645 73 286 6.54E-34 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS10900 72008b6b870055c51358e0764af80e9a 623 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 166 275 2.3E-21 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 JE55_RS10900 72008b6b870055c51358e0764af80e9a 623 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 4 35 4.0E-6 T 22-04-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria JE55_RS10900 72008b6b870055c51358e0764af80e9a 623 SUPERFAMILY SSF47203 292 478 8.54E-36 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS10900 72008b6b870055c51358e0764af80e9a 623 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 491 611 9.5E-23 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain JE55_RS10900 72008b6b870055c51358e0764af80e9a 623 PANTHER PTHR10909:SF154 4 488 8.0E-73 T 22-04-2016 JE55_RS11175 b01b8813272463b544c6c3851d821d95 258 Pfam PF00005 ABC transporter 31 183 1.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS11175 b01b8813272463b544c6c3851d821d95 258 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS11175 b01b8813272463b544c6c3851d821d95 258 PANTHER PTHR24220:SF497 17 254 3.5E-132 T 22-04-2016 JE55_RS11175 b01b8813272463b544c6c3851d821d95 258 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 16 258 1.2E-118 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 JE55_RS11175 b01b8813272463b544c6c3851d821d95 258 PANTHER PTHR24220 17 254 3.5E-132 T 22-04-2016 JE55_RS11175 b01b8813272463b544c6c3851d821d95 258 Gene3D G3DSA:3.40.50.300 14 251 6.5E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11175 b01b8813272463b544c6c3851d821d95 258 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 232 253 2.3E-5 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JE55_RS11175 b01b8813272463b544c6c3851d821d95 258 SUPERFAMILY SSF52540 16 254 9.15E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11175 b01b8813272463b544c6c3851d821d95 258 SMART SM00382 40 248 3.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS02460 c1a6dd7be5e71f56134336fcd5b9dfa0 263 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 139 208 6.0E-11 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS02460 c1a6dd7be5e71f56134336fcd5b9dfa0 263 Gene3D G3DSA:3.90.470.20 152 218 5.8E-17 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS02460 c1a6dd7be5e71f56134336fcd5b9dfa0 263 PANTHER PTHR12215 37 209 1.5E-34 T 22-04-2016 JE55_RS02460 c1a6dd7be5e71f56134336fcd5b9dfa0 263 Gene3D G3DSA:3.90.470.20 35 151 7.0E-30 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS02460 c1a6dd7be5e71f56134336fcd5b9dfa0 263 SUPERFAMILY SSF56214 32 131 1.57E-20 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS02460 c1a6dd7be5e71f56134336fcd5b9dfa0 263 SUPERFAMILY SSF56214 139 256 5.23E-17 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 JE55_RS09380 be70b3afc5983a0662fd95fabbb21aba 267 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 36 219 7.6E-45 T 22-04-2016 IPR010237 Pyrimidine 5-nucleotidase JE55_RS09380 be70b3afc5983a0662fd95fabbb21aba 267 Gene3D G3DSA:3.40.50.1000 37 244 3.6E-20 T 22-04-2016 IPR023214 HAD-like domain JE55_RS09380 be70b3afc5983a0662fd95fabbb21aba 267 SUPERFAMILY SSF56784 36 243 7.38E-26 T 22-04-2016 IPR023214 HAD-like domain JE55_RS09380 be70b3afc5983a0662fd95fabbb21aba 267 PANTHER PTHR12725:SF79 17 220 9.0E-21 T 22-04-2016 JE55_RS09380 be70b3afc5983a0662fd95fabbb21aba 267 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 114 220 4.5E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS09380 be70b3afc5983a0662fd95fabbb21aba 267 PANTHER PTHR12725 17 220 9.0E-21 T 22-04-2016 JE55_RS09380 be70b3afc5983a0662fd95fabbb21aba 267 Pfam PF13419 Haloacid dehalogenase-like hydrolase 38 220 9.3E-11 T 22-04-2016 IPR023214 HAD-like domain JE55_RS10495 564f816128e2790fed8c8ded8522dda2 105 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 24 92 2.2E-6 T 22-04-2016 JE55_RS10495 564f816128e2790fed8c8ded8522dda2 105 PANTHER PTHR11780 6 105 4.2E-28 T 22-04-2016 JE55_RS10495 564f816128e2790fed8c8ded8522dda2 105 PANTHER PTHR11780:SF12 6 105 4.2E-28 T 22-04-2016 JE55_RS10495 564f816128e2790fed8c8ded8522dda2 105 Gene3D G3DSA:3.40.30.10 5 104 1.4E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10495 564f816128e2790fed8c8ded8522dda2 105 SUPERFAMILY SSF52833 5 104 1.42E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS26275 55f82328e970774605e48e128dabeb16 321 SMART SM00342 234 319 1.1E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS26275 55f82328e970774605e48e128dabeb16 321 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 288 303 2.1E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS26275 55f82328e970774605e48e128dabeb16 321 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 319 2.1E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 JE55_RS26275 55f82328e970774605e48e128dabeb16 321 Pfam PF14525 AraC-binding-like domain 27 201 2.7E-29 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 JE55_RS26275 55f82328e970774605e48e128dabeb16 321 PANTHER PTHR11019 81 318 1.3E-38 T 22-04-2016 JE55_RS26275 55f82328e970774605e48e128dabeb16 321 Gene3D G3DSA:2.60.120.10 80 139 2.1E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS26275 55f82328e970774605e48e128dabeb16 321 Pfam PF12833 Helix-turn-helix domain 240 321 6.0E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS26275 55f82328e970774605e48e128dabeb16 321 PANTHER PTHR11019:SF50 81 318 1.3E-38 T 22-04-2016 JE55_RS26275 55f82328e970774605e48e128dabeb16 321 SUPERFAMILY SSF46689 271 320 2.96E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS26275 55f82328e970774605e48e128dabeb16 321 Gene3D G3DSA:1.10.10.60 270 318 6.8E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS26275 55f82328e970774605e48e128dabeb16 321 Gene3D G3DSA:1.10.10.60 221 267 1.0E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS14900 8d583d3779fd951ec9ce5a4b182ce2e0 301 PANTHER PTHR30193 3 295 7.9E-39 T 22-04-2016 JE55_RS14900 8d583d3779fd951ec9ce5a4b182ce2e0 301 SUPERFAMILY SSF161098 37 282 3.01E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS14900 8d583d3779fd951ec9ce5a4b182ce2e0 301 PANTHER PTHR30193:SF20 3 295 7.9E-39 T 22-04-2016 JE55_RS14900 8d583d3779fd951ec9ce5a4b182ce2e0 301 Gene3D G3DSA:1.10.3720.10 41 282 1.8E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS14900 8d583d3779fd951ec9ce5a4b182ce2e0 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 280 7.4E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS06215 53f12b7e47f81e45431a2616761f0ba0 304 PANTHER PTHR30487:SF0 19 55 8.7E-89 T 22-04-2016 JE55_RS06215 53f12b7e47f81e45431a2616761f0ba0 304 PANTHER PTHR30487:SF0 78 302 8.7E-89 T 22-04-2016 JE55_RS06215 53f12b7e47f81e45431a2616761f0ba0 304 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 37 141 1.7E-32 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- JE55_RS06215 53f12b7e47f81e45431a2616761f0ba0 304 PANTHER PTHR30487 19 55 8.7E-89 T 22-04-2016 JE55_RS06215 53f12b7e47f81e45431a2616761f0ba0 304 PANTHER PTHR30487 78 302 8.7E-89 T 22-04-2016 JE55_RS06215 53f12b7e47f81e45431a2616761f0ba0 304 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 244 259 2.68E-22 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- JE55_RS06215 53f12b7e47f81e45431a2616761f0ba0 304 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 232 243 2.68E-22 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- JE55_RS06215 53f12b7e47f81e45431a2616761f0ba0 304 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 221 231 2.68E-22 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- JE55_RS06215 53f12b7e47f81e45431a2616761f0ba0 304 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 164 181 2.68E-22 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- JE55_RS06215 53f12b7e47f81e45431a2616761f0ba0 304 Pfam PF01478 Type IV leader peptidase family 157 264 4.3E-23 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 JE55_RS08180 c2c50d4758b064949147e7b5a3aa6d1a 247 PANTHER PTHR30349 1 244 2.0E-47 T 22-04-2016 JE55_RS08180 c2c50d4758b064949147e7b5a3aa6d1a 247 Pfam PF00589 Phage integrase family 70 233 1.4E-34 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS08180 c2c50d4758b064949147e7b5a3aa6d1a 247 Gene3D G3DSA:1.10.443.10 64 244 6.3E-46 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS08180 c2c50d4758b064949147e7b5a3aa6d1a 247 PANTHER PTHR30349:SF20 1 244 2.0E-47 T 22-04-2016 JE55_RS08180 c2c50d4758b064949147e7b5a3aa6d1a 247 SUPERFAMILY SSF56349 1 242 2.27E-55 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS16220 74094bdb05a2bbaad51cf7cc465630d4 134 Pfam PF13411 MerR HTH family regulatory protein 19 87 1.0E-22 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS16220 74094bdb05a2bbaad51cf7cc465630d4 134 SMART SM00422 19 89 1.1E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 JE55_RS16220 74094bdb05a2bbaad51cf7cc465630d4 134 SUPERFAMILY SSF46955 17 129 1.42E-20 T 22-04-2016 IPR009061 Putative DNA-binding domain JE55_RS16220 74094bdb05a2bbaad51cf7cc465630d4 134 Gene3D G3DSA:1.10.1660.10 19 132 1.7E-18 T 22-04-2016 JE55_RS16220 74094bdb05a2bbaad51cf7cc465630d4 134 PANTHER PTHR30204 11 93 2.6E-27 T 22-04-2016 JE55_RS16220 74094bdb05a2bbaad51cf7cc465630d4 134 PANTHER PTHR30204:SF15 11 93 2.6E-27 T 22-04-2016 JE55_RS02535 01af7100bb65b83b00c2c2b289ce9285 159 SUPERFAMILY SSF55718 42 133 4.71E-17 T 22-04-2016 IPR003033 SCP2 sterol-binding domain JE55_RS02535 01af7100bb65b83b00c2c2b289ce9285 159 PANTHER PTHR10094 4 142 6.1E-27 T 22-04-2016 JE55_RS02535 01af7100bb65b83b00c2c2b289ce9285 159 PANTHER PTHR10094:SF16 4 142 6.1E-27 T 22-04-2016 JE55_RS02535 01af7100bb65b83b00c2c2b289ce9285 159 Pfam PF02036 SCP-2 sterol transfer family 42 127 3.2E-11 T 22-04-2016 IPR003033 SCP2 sterol-binding domain JE55_RS02535 01af7100bb65b83b00c2c2b289ce9285 159 Gene3D G3DSA:3.30.1050.10 56 130 1.1E-7 T 22-04-2016 IPR003033 SCP2 sterol-binding domain JE55_RS16630 082f77108235f8223251e996b84ec8a4 112 PANTHER PTHR30561:SF1 2 112 1.4E-52 T 22-04-2016 JE55_RS16630 082f77108235f8223251e996b84ec8a4 112 PANTHER PTHR30561 2 112 1.4E-52 T 22-04-2016 JE55_RS16630 082f77108235f8223251e996b84ec8a4 112 Pfam PF00893 Small Multidrug Resistance protein 6 96 1.3E-27 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 JE55_RS16630 082f77108235f8223251e996b84ec8a4 112 SUPERFAMILY SSF103481 9 109 4.84E-20 T 22-04-2016 JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 SMART SM00345 13 70 0.0016 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 7.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 7.7E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 SUPERFAMILY SSF46785 5 74 1.09E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 Pfam PF07729 FCD domain 99 219 4.4E-20 T 22-04-2016 IPR011711 GntR, C-terminal JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 PANTHER PTHR11751 92 115 4.1E-16 T 22-04-2016 JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 PANTHER PTHR11751 13 72 4.1E-16 T 22-04-2016 JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 70 1.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 Gene3D G3DSA:1.20.120.530 90 235 5.4E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 SUPERFAMILY SSF48008 96 228 3.92E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 SMART SM00895 99 221 1.2E-17 T 22-04-2016 IPR011711 GntR, C-terminal JE55_RS16580 1a4dbcdbb1f1bfa00699899c9b80d357 237 Gene3D G3DSA:1.10.10.10 3 79 1.7E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS01000 4a3ac9aa9d4b1d00e771fceaf18acc20 510 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 62 496 6.6E-87 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 JE55_RS01000 4a3ac9aa9d4b1d00e771fceaf18acc20 510 PANTHER PTHR30618 1 509 1.1E-213 T 22-04-2016 JE55_RS01000 4a3ac9aa9d4b1d00e771fceaf18acc20 510 PANTHER PTHR30618:SF6 1 509 1.1E-213 T 22-04-2016 JE55_RS04770 dbb47e2f84d515620b3ca174f2b95d13 212 Gene3D G3DSA:3.40.30.10 4 157 1.1E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS04770 dbb47e2f84d515620b3ca174f2b95d13 212 Pfam PF00578 AhpC/TSA family 6 135 2.2E-29 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS04770 dbb47e2f84d515620b3ca174f2b95d13 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 196 1.5E-8 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS04770 dbb47e2f84d515620b3ca174f2b95d13 212 Gene3D G3DSA:3.30.1020.10 158 211 1.3E-26 T 22-04-2016 JE55_RS04770 dbb47e2f84d515620b3ca174f2b95d13 212 PANTHER PTHR10681 3 207 1.0E-89 T 22-04-2016 JE55_RS04770 dbb47e2f84d515620b3ca174f2b95d13 212 PIRSF PIRSF000239 1 209 4.3E-77 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 JE55_RS04770 dbb47e2f84d515620b3ca174f2b95d13 212 SUPERFAMILY SSF52833 3 209 3.92E-67 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS04770 dbb47e2f84d515620b3ca174f2b95d13 212 PANTHER PTHR10681:SF99 3 207 1.0E-89 T 22-04-2016 JE55_RS04430 be6787f482b46455448193563d1838c5 353 PANTHER PTHR10366 1 349 7.1E-167 T 22-04-2016 JE55_RS04430 be6787f482b46455448193563d1838c5 353 Gene3D G3DSA:3.90.25.10 191 346 6.3E-57 T 22-04-2016 JE55_RS04430 be6787f482b46455448193563d1838c5 353 PANTHER PTHR10366:SF437 1 349 7.1E-167 T 22-04-2016 JE55_RS04430 be6787f482b46455448193563d1838c5 353 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 335 1.3E-152 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 JE55_RS04430 be6787f482b46455448193563d1838c5 353 Gene3D G3DSA:3.40.50.720 2 190 1.1E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04430 be6787f482b46455448193563d1838c5 353 SUPERFAMILY SSF51735 2 333 4.55E-90 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04430 be6787f482b46455448193563d1838c5 353 Pfam PF16363 GDP-mannose 4,6 dehydratase 3 322 2.7E-99 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS15835 12390f8fd92d9f6316c1c1bd6baa30c4 406 SUPERFAMILY SSF89796 1 406 1.27E-150 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS15835 12390f8fd92d9f6316c1c1bd6baa30c4 406 Gene3D G3DSA:3.30.1540.10 232 314 5.3E-40 T 22-04-2016 JE55_RS15835 12390f8fd92d9f6316c1c1bd6baa30c4 406 Pfam PF02515 CoA-transferase family III 4 382 6.6E-135 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 JE55_RS15835 12390f8fd92d9f6316c1c1bd6baa30c4 406 Gene3D G3DSA:3.40.50.10540 2 226 1.3E-126 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS15835 12390f8fd92d9f6316c1c1bd6baa30c4 406 Gene3D G3DSA:3.40.50.10540 315 406 1.3E-126 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS15835 12390f8fd92d9f6316c1c1bd6baa30c4 406 PANTHER PTHR24023:SF593 61 393 6.7E-40 T 22-04-2016 JE55_RS15835 12390f8fd92d9f6316c1c1bd6baa30c4 406 PANTHER PTHR24023 61 393 6.7E-40 T 22-04-2016 JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 SMART SM00833 274 395 6.8E-48 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 PANTHER PTHR13748 270 347 2.8E-176 T 22-04-2016 JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 PANTHER PTHR13748 369 409 2.8E-176 T 22-04-2016 JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 PANTHER PTHR13748 1 254 2.8E-176 T 22-04-2016 JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 SUPERFAMILY SSF52540 3 317 5.1E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 Gene3D G3DSA:3.30.1220.10 262 395 1.7E-15 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 275 395 3.3E-30 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 PANTHER PTHR13748:SF4 270 347 2.8E-176 T 22-04-2016 JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 PANTHER PTHR13748:SF4 369 409 2.8E-176 T 22-04-2016 JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 PANTHER PTHR13748:SF4 1 254 2.8E-176 T 22-04-2016 JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 209 2.6E-56 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JE55_RS08630 af7f924b9c6b2edfcfe7bd04573fbd8a 446 Gene3D G3DSA:3.40.50.300 4 229 2.1E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10300 ee1e2e3e1f40a60aeed886c18ad22e7a 394 Gene3D G3DSA:3.40.640.10 58 275 1.0E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS10300 ee1e2e3e1f40a60aeed886c18ad22e7a 394 SUPERFAMILY SSF53383 5 387 1.73E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS10300 ee1e2e3e1f40a60aeed886c18ad22e7a 394 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 390 49.3 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 JE55_RS10300 ee1e2e3e1f40a60aeed886c18ad22e7a 394 Pfam PF00155 Aminotransferase class I and II 41 382 1.7E-58 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS10300 ee1e2e3e1f40a60aeed886c18ad22e7a 394 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 386 9.2E-137 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 JE55_RS10300 ee1e2e3e1f40a60aeed886c18ad22e7a 394 Gene3D G3DSA:3.90.1150.10 276 387 3.3E-29 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS10300 ee1e2e3e1f40a60aeed886c18ad22e7a 394 PANTHER PTHR13693 7 386 8.4E-154 T 22-04-2016 JE55_RS10300 ee1e2e3e1f40a60aeed886c18ad22e7a 394 PANTHER PTHR13693:SF53 7 386 8.4E-154 T 22-04-2016 JE55_RS04360 cb3cd945019a43189e1124cc3ea216c9 637 Gene3D G3DSA:3.40.50.720 287 469 3.3E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04360 cb3cd945019a43189e1124cc3ea216c9 637 SUPERFAMILY SSF51735 147 275 1.69E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04360 cb3cd945019a43189e1124cc3ea216c9 637 Gene3D G3DSA:3.90.25.10 470 573 7.4E-7 T 22-04-2016 JE55_RS04360 cb3cd945019a43189e1124cc3ea216c9 637 Pfam PF13727 CoA-binding domain 65 230 3.9E-7 T 22-04-2016 JE55_RS04360 cb3cd945019a43189e1124cc3ea216c9 637 SUPERFAMILY SSF51735 286 575 2.92E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04360 cb3cd945019a43189e1124cc3ea216c9 637 Pfam PF02719 Polysaccharide biosynthesis protein 288 571 4.6E-122 T 22-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain JE55_RS04360 cb3cd945019a43189e1124cc3ea216c9 637 PANTHER PTHR10366:SF256 287 556 3.9E-123 T 22-04-2016 JE55_RS04360 cb3cd945019a43189e1124cc3ea216c9 637 Gene3D G3DSA:3.40.50.720 146 268 1.2E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04360 cb3cd945019a43189e1124cc3ea216c9 637 PANTHER PTHR10366 287 556 3.9E-123 T 22-04-2016 JE55_RS05765 7eccd12b0c773dc2deae557ae29c1181 362 SUPERFAMILY SSF48019 216 348 7.14E-26 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 JE55_RS05765 7eccd12b0c773dc2deae557ae29c1181 362 Gene3D G3DSA:3.40.50.300 1 138 1.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05765 7eccd12b0c773dc2deae557ae29c1181 362 Gene3D G3DSA:1.20.272.20 227 350 5.2E-39 T 22-04-2016 JE55_RS05765 7eccd12b0c773dc2deae557ae29c1181 362 Gene3D G3DSA:1.10.8.60 142 226 8.0E-34 T 22-04-2016 JE55_RS05765 7eccd12b0c773dc2deae557ae29c1181 362 SUPERFAMILY SSF52540 1 214 2.6E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05765 7eccd12b0c773dc2deae557ae29c1181 362 Pfam PF06144 DNA polymerase III, delta subunit 20 193 7.6E-23 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 JE55_RS05765 7eccd12b0c773dc2deae557ae29c1181 362 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 220 317 4.8E-10 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS05765 7eccd12b0c773dc2deae557ae29c1181 362 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 17 323 1.5E-81 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 JE55_RS05765 7eccd12b0c773dc2deae557ae29c1181 362 PANTHER PTHR34388 1 358 1.6E-59 T 22-04-2016 JE55_RS00905 d88a92678dd1b51b22dad7889042d261 343 Gene3D G3DSA:3.40.50.1100 87 336 5.8E-69 T 22-04-2016 JE55_RS00905 d88a92678dd1b51b22dad7889042d261 343 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 59 72 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 JE55_RS00905 d88a92678dd1b51b22dad7889042d261 343 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 35 320 9.2E-71 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS00905 d88a92678dd1b51b22dad7889042d261 343 PANTHER PTHR10314 20 335 2.1E-92 T 22-04-2016 JE55_RS00905 d88a92678dd1b51b22dad7889042d261 343 SUPERFAMILY SSF53686 21 327 8.25E-83 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme JE55_RS00905 d88a92678dd1b51b22dad7889042d261 343 PANTHER PTHR10314:SF17 20 335 2.1E-92 T 22-04-2016 JE55_RS20460 13efc5c3055cb14be7b30d543eb154cd 255 PANTHER PTHR32071:SF15 1 218 1.3E-118 T 22-04-2016 JE55_RS20460 13efc5c3055cb14be7b30d543eb154cd 255 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 45 60 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JE55_RS20460 13efc5c3055cb14be7b30d543eb154cd 255 Pfam PF00158 Sigma-54 interaction domain 1 125 3.7E-53 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 JE55_RS20460 13efc5c3055cb14be7b30d543eb154cd 255 Gene3D G3DSA:1.10.8.60 132 204 1.0E-22 T 22-04-2016 JE55_RS20460 13efc5c3055cb14be7b30d543eb154cd 255 SUPERFAMILY SSF52540 1 202 2.07E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS20460 13efc5c3055cb14be7b30d543eb154cd 255 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 172 181 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site JE55_RS20460 13efc5c3055cb14be7b30d543eb154cd 255 Gene3D G3DSA:3.40.50.300 1 131 1.4E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS20460 13efc5c3055cb14be7b30d543eb154cd 255 PANTHER PTHR32071 1 218 1.3E-118 T 22-04-2016 JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 510 5.1E-137 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PANTHER PTHR11206 221 446 1.5E-70 T 22-04-2016 JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PANTHER PTHR11206 70 85 1.5E-70 T 22-04-2016 JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PANTHER PTHR11206 472 504 1.5E-70 T 22-04-2016 JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PANTHER PTHR11206:SF90 221 446 1.5E-70 T 22-04-2016 JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PANTHER PTHR11206:SF90 70 85 1.5E-70 T 22-04-2016 JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PANTHER PTHR11206:SF90 472 504 1.5E-70 T 22-04-2016 JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PIRSF PIRSF002869 1 516 1.4E-144 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PRINTS PR01806 Virulence factor MviN signature 52 68 1.9E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PRINTS PR01806 Virulence factor MviN signature 33 52 1.9E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PRINTS PR01806 Virulence factor MviN signature 361 380 1.9E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PRINTS PR01806 Virulence factor MviN signature 133 157 1.9E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PRINTS PR01806 Virulence factor MviN signature 263 289 1.9E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PRINTS PR01806 Virulence factor MviN signature 157 178 1.9E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 PRINTS PR01806 Virulence factor MviN signature 413 430 1.9E-78 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ JE55_RS12670 58fa3d62437130b20f952602df5759d3 516 Pfam PF03023 MviN-like protein 28 473 3.5E-129 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ JE55_RS15115 fe4a9caa01ff7bdc8353781b78be4b94 312 Gene3D G3DSA:3.40.366.10 189 293 1.2E-39 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 JE55_RS15115 fe4a9caa01ff7bdc8353781b78be4b94 312 Gene3D G3DSA:3.40.366.10 2 119 1.2E-39 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 JE55_RS15115 fe4a9caa01ff7bdc8353781b78be4b94 312 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 305 4.2E-104 T 22-04-2016 IPR017554 Malonate decarboxylase, McdH subunit JE55_RS15115 fe4a9caa01ff7bdc8353781b78be4b94 312 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 298 4.4E-12 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain JE55_RS15115 fe4a9caa01ff7bdc8353781b78be4b94 312 SUPERFAMILY SSF52151 3 125 5.23E-43 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 JE55_RS15115 fe4a9caa01ff7bdc8353781b78be4b94 312 SUPERFAMILY SSF52151 190 294 5.23E-43 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 JE55_RS15115 fe4a9caa01ff7bdc8353781b78be4b94 312 PANTHER PTHR10982:SF16 1 306 1.1E-110 T 22-04-2016 JE55_RS15115 fe4a9caa01ff7bdc8353781b78be4b94 312 Pfam PF00698 Acyl transferase domain 6 211 2.6E-16 T 22-04-2016 IPR014043 Acyl transferase JE55_RS15115 fe4a9caa01ff7bdc8353781b78be4b94 312 Gene3D G3DSA:3.30.70.250 124 188 2.0E-7 T 22-04-2016 JE55_RS15115 fe4a9caa01ff7bdc8353781b78be4b94 312 SUPERFAMILY SSF55048 125 188 6.41E-8 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 JE55_RS15115 fe4a9caa01ff7bdc8353781b78be4b94 312 PANTHER PTHR10982 1 306 1.1E-110 T 22-04-2016 JE55_RS23015 d07c530ac3ee815fd3379418de98bac7 115 Gene3D G3DSA:3.30.1330.10 19 114 8.3E-38 T 22-04-2016 IPR016188 PurM-like, N-terminal domain JE55_RS23015 d07c530ac3ee815fd3379418de98bac7 115 SUPERFAMILY SSF55326 4 114 1.47E-33 T 22-04-2016 JE55_RS23015 d07c530ac3ee815fd3379418de98bac7 115 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 109 5.8E-7 T 22-04-2016 IPR016188 PurM-like, N-terminal domain JE55_RS23015 d07c530ac3ee815fd3379418de98bac7 115 PANTHER PTHR10520 4 115 2.4E-75 T 22-04-2016 JE55_RS09605 13422f326cdc81a5b27b4ae04d617bdf 256 PANTHER PTHR19370:SF98 3 256 1.6E-112 T 22-04-2016 JE55_RS09605 13422f326cdc81a5b27b4ae04d617bdf 256 Pfam PF00175 Oxidoreductase NAD-binding domain 112 228 9.8E-6 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JE55_RS09605 13422f326cdc81a5b27b4ae04d617bdf 256 Pfam PF00970 Oxidoreductase FAD-binding domain 19 98 1.2E-7 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain JE55_RS09605 13422f326cdc81a5b27b4ae04d617bdf 256 SUPERFAMILY SSF52343 103 254 1.57E-37 T 22-04-2016 JE55_RS09605 13422f326cdc81a5b27b4ae04d617bdf 256 SUPERFAMILY SSF63380 4 99 6.99E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 JE55_RS09605 13422f326cdc81a5b27b4ae04d617bdf 256 Gene3D G3DSA:2.40.30.10 3 97 1.7E-30 T 22-04-2016 JE55_RS09605 13422f326cdc81a5b27b4ae04d617bdf 256 PANTHER PTHR19370 3 256 1.6E-112 T 22-04-2016 JE55_RS09605 13422f326cdc81a5b27b4ae04d617bdf 256 Gene3D G3DSA:3.40.50.80 98 255 1.4E-43 T 22-04-2016 JE55_RS09535 5a7f6d9c7ad0437620fe511714a87011 523 PANTHER PTHR15184 68 503 1.9E-220 T 22-04-2016 JE55_RS09535 5a7f6d9c7ad0437620fe511714a87011 523 SMART SM00382 239 422 2.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS09535 5a7f6d9c7ad0437620fe511714a87011 523 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 92 516 8.6E-197 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS09535 5a7f6d9c7ad0437620fe511714a87011 523 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 429 438 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS09535 5a7f6d9c7ad0437620fe511714a87011 523 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 87 518 6.6E-177 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS09535 5a7f6d9c7ad0437620fe511714a87011 523 Gene3D G3DSA:3.40.50.300 174 439 2.0E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09535 5a7f6d9c7ad0437620fe511714a87011 523 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 227 438 2.0E-74 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS09535 5a7f6d9c7ad0437620fe511714a87011 523 SUPERFAMILY SSF52540 174 444 1.26E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09535 5a7f6d9c7ad0437620fe511714a87011 523 PANTHER PTHR15184:SF9 68 503 1.9E-220 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS17080 21bebd25cdeba3bb2e8f1055b5eef9e8 581 Gene3D G3DSA:3.40.50.300 350 566 2.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17080 21bebd25cdeba3bb2e8f1055b5eef9e8 581 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 23 567 2.1E-139 T 22-04-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 JE55_RS17080 21bebd25cdeba3bb2e8f1055b5eef9e8 581 PANTHER PTHR24220 351 566 2.7E-92 T 22-04-2016 JE55_RS17080 21bebd25cdeba3bb2e8f1055b5eef9e8 581 SUPERFAMILY SSF52540 350 565 4.69E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17080 21bebd25cdeba3bb2e8f1055b5eef9e8 581 PANTHER PTHR24220:SF425 351 566 2.7E-92 T 22-04-2016 JE55_RS17080 21bebd25cdeba3bb2e8f1055b5eef9e8 581 SUPERFAMILY SSF90123 25 327 1.7E-30 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS17080 21bebd25cdeba3bb2e8f1055b5eef9e8 581 SMART SM00382 379 569 3.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS17080 21bebd25cdeba3bb2e8f1055b5eef9e8 581 Pfam PF00005 ABC transporter 373 513 3.9E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS17080 21bebd25cdeba3bb2e8f1055b5eef9e8 581 Gene3D G3DSA:1.20.1560.10 28 333 3.7E-24 T 22-04-2016 JE55_RS06225 2aa7fe1f61100ed02dffca425c393f71 251 Gene3D G3DSA:1.10.3900.10 10 172 1.3E-67 T 22-04-2016 JE55_RS06225 2aa7fe1f61100ed02dffca425c393f71 251 Gene3D G3DSA:2.60.440.10 173 249 9.4E-20 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain JE55_RS06225 2aa7fe1f61100ed02dffca425c393f71 251 Pfam PF07072 Protein of unknown function (DUF1342) 16 225 9.3E-82 T 22-04-2016 IPR009777 Cell division protein ZapD JE55_RS06225 2aa7fe1f61100ed02dffca425c393f71 251 Hamap MF_01092 Cell division protein ZapD [zapD]. 1 249 33.568 T 22-04-2016 IPR009777 Cell division protein ZapD JE55_RS06225 2aa7fe1f61100ed02dffca425c393f71 251 PANTHER PTHR39455:SF1 2 250 1.0E-54 T 22-04-2016 JE55_RS06225 2aa7fe1f61100ed02dffca425c393f71 251 SUPERFAMILY SSF160950 2 249 1.7E-88 T 22-04-2016 JE55_RS06225 2aa7fe1f61100ed02dffca425c393f71 251 PANTHER PTHR39455 2 250 1.0E-54 T 22-04-2016 JE55_RS07985 8fc9187683cedb8906845049036f590e 354 SUPERFAMILY SSF53756 10 339 2.01E-63 T 22-04-2016 JE55_RS07985 8fc9187683cedb8906845049036f590e 354 Gene3D G3DSA:3.40.50.2000 171 307 2.8E-20 T 22-04-2016 JE55_RS07985 8fc9187683cedb8906845049036f590e 354 PANTHER PTHR12526 1 347 1.4E-52 T 22-04-2016 JE55_RS07985 8fc9187683cedb8906845049036f590e 354 Pfam PF13439 Glycosyltransferase Family 4 18 119 1.8E-13 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JE55_RS07985 8fc9187683cedb8906845049036f590e 354 Pfam PF00534 Glycosyl transferases group 1 170 314 3.5E-27 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS13620 0b89ca3b298c4edb4269e2f999d48cf1 88 PANTHER PTHR33370 1 83 2.5E-33 T 22-04-2016 JE55_RS13620 0b89ca3b298c4edb4269e2f999d48cf1 88 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 24.349 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JE55_RS13620 0b89ca3b298c4edb4269e2f999d48cf1 88 SUPERFAMILY SSF50249 1 71 4.86E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS13620 0b89ca3b298c4edb4269e2f999d48cf1 88 SMART SM00316 4 72 0.0044 T 22-04-2016 IPR022967 RNA-binding domain, S1 JE55_RS13620 0b89ca3b298c4edb4269e2f999d48cf1 88 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 2.5E-28 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 JE55_RS13620 0b89ca3b298c4edb4269e2f999d48cf1 88 Gene3D G3DSA:2.40.50.140 1 72 5.7E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS13620 0b89ca3b298c4edb4269e2f999d48cf1 88 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 4.3E-20 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 JE55_RS01345 7d6a9586f31c619440bcc16106e29d60 89 SUPERFAMILY SSF47027 5 85 7.46E-28 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 JE55_RS01345 7d6a9586f31c619440bcc16106e29d60 89 PRINTS PR00689 Acyl-coA-binding protein signature 5 20 7.0E-20 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 JE55_RS01345 7d6a9586f31c619440bcc16106e29d60 89 PRINTS PR00689 Acyl-coA-binding protein signature 45 60 7.0E-20 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 JE55_RS01345 7d6a9586f31c619440bcc16106e29d60 89 PRINTS PR00689 Acyl-coA-binding protein signature 66 83 7.0E-20 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 JE55_RS01345 7d6a9586f31c619440bcc16106e29d60 89 PRINTS PR00689 Acyl-coA-binding protein signature 22 40 7.0E-20 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 JE55_RS01345 7d6a9586f31c619440bcc16106e29d60 89 Gene3D G3DSA:1.20.80.10 1 86 2.6E-31 T 22-04-2016 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle JE55_RS01345 7d6a9586f31c619440bcc16106e29d60 89 Pfam PF00887 Acyl CoA binding protein 6 84 1.6E-26 T 22-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 JE55_RS01345 7d6a9586f31c619440bcc16106e29d60 89 PANTHER PTHR23310 1 84 5.5E-35 T 22-04-2016 JE55_RS15820 baa9b068cd77fb91c7baf5f55aa4bdbd 160 PANTHER PTHR22769 11 98 2.0E-15 T 22-04-2016 JE55_RS15820 baa9b068cd77fb91c7baf5f55aa4bdbd 160 ProSitePatterns PS00893 Nudix box signature. 44 65 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JE55_RS15820 baa9b068cd77fb91c7baf5f55aa4bdbd 160 PRINTS PR00502 NUDIX hydrolase family signature 39 53 6.2E-7 T 22-04-2016 IPR020476 NUDIX hydrolase JE55_RS15820 baa9b068cd77fb91c7baf5f55aa4bdbd 160 PRINTS PR00502 NUDIX hydrolase family signature 53 68 6.2E-7 T 22-04-2016 IPR020476 NUDIX hydrolase JE55_RS15820 baa9b068cd77fb91c7baf5f55aa4bdbd 160 Pfam PF00293 NUDIX domain 13 133 2.7E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 JE55_RS15820 baa9b068cd77fb91c7baf5f55aa4bdbd 160 Gene3D G3DSA:3.90.79.10 14 137 8.5E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS15820 baa9b068cd77fb91c7baf5f55aa4bdbd 160 SUPERFAMILY SSF55811 11 139 1.76E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS17520 e72c8cf5655f6e029ff43dd75d805c3b 277 Pfam PF13683 Integrase core domain 191 256 8.8E-33 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 JE55_RS17520 e72c8cf5655f6e029ff43dd75d805c3b 277 PANTHER PTHR32552 1 259 7.0E-123 T 22-04-2016 JE55_RS17520 e72c8cf5655f6e029ff43dd75d805c3b 277 PANTHER PTHR32552:SF35 1 259 7.0E-123 T 22-04-2016 JE55_RS17520 e72c8cf5655f6e029ff43dd75d805c3b 277 Gene3D G3DSA:3.30.420.10 102 257 9.0E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS17520 e72c8cf5655f6e029ff43dd75d805c3b 277 SUPERFAMILY SSF53098 102 267 2.66E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS17520 e72c8cf5655f6e029ff43dd75d805c3b 277 Pfam PF13276 HTH-like domain 36 91 2.1E-12 T 22-04-2016 IPR025948 HTH-like domain JE55_RS12840 fdc2a318454100dfa687eb841deb4b45 458 Pfam PF00324 Amino acid permease 27 454 5.8E-91 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 JE55_RS12840 fdc2a318454100dfa687eb841deb4b45 458 PANTHER PTHR11785:SF317 14 450 2.0E-203 T 22-04-2016 JE55_RS12840 fdc2a318454100dfa687eb841deb4b45 458 PIRSF PIRSF006060 9 457 2.2E-67 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS12840 fdc2a318454100dfa687eb841deb4b45 458 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 JE55_RS12840 fdc2a318454100dfa687eb841deb4b45 458 PANTHER PTHR11785 14 450 2.0E-203 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS14710 19bdd31c17bfbd81460c27f9edc91dac 445 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 102 323 3.8E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JE55_RS14710 19bdd31c17bfbd81460c27f9edc91dac 445 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 76 404 1.0E-74 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 JE55_RS14710 19bdd31c17bfbd81460c27f9edc91dac 445 PANTHER PTHR30469 71 415 2.2E-146 T 22-04-2016 JE55_RS14710 19bdd31c17bfbd81460c27f9edc91dac 445 PANTHER PTHR30469:SF12 71 415 2.2E-146 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA JE55_RS14710 19bdd31c17bfbd81460c27f9edc91dac 445 SUPERFAMILY SSF111369 91 327 8.37E-57 T 22-04-2016 JE55_RS14710 19bdd31c17bfbd81460c27f9edc91dac 445 Gene3D G3DSA:2.40.50.100 209 243 1.3E-23 T 22-04-2016 JE55_RS14710 19bdd31c17bfbd81460c27f9edc91dac 445 Gene3D G3DSA:2.40.50.100 101 134 1.3E-23 T 22-04-2016 JE55_RS20375 fc276249b348775f00a34a1157076a59 198 Pfam PF01432 Peptidase family M3 3 197 5.6E-68 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 JE55_RS20375 fc276249b348775f00a34a1157076a59 198 PANTHER PTHR11804 2 198 1.3E-96 T 22-04-2016 JE55_RS20375 fc276249b348775f00a34a1157076a59 198 Gene3D G3DSA:3.40.390.10 14 161 7.5E-60 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 JE55_RS20375 fc276249b348775f00a34a1157076a59 198 PANTHER PTHR11804:SF8 2 198 1.3E-96 T 22-04-2016 JE55_RS20375 fc276249b348775f00a34a1157076a59 198 SUPERFAMILY SSF55486 2 198 5.04E-69 T 22-04-2016 JE55_RS02005 a80270ff4544061397bc0269b892880d 258 SUPERFAMILY SSF56281 3 235 1.31E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS02005 a80270ff4544061397bc0269b892880d 258 SMART SM00849 11 190 1.9E-4 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS02005 a80270ff4544061397bc0269b892880d 258 Gene3D G3DSA:3.60.15.10 3 234 7.9E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS02005 a80270ff4544061397bc0269b892880d 258 PANTHER PTHR13754:SF15 1 229 4.4E-54 T 22-04-2016 JE55_RS02005 a80270ff4544061397bc0269b892880d 258 Pfam PF12706 Beta-lactamase superfamily domain 26 210 1.2E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS02005 a80270ff4544061397bc0269b892880d 258 PANTHER PTHR13754 1 229 4.4E-54 T 22-04-2016 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 Pfam PF00815 Histidinol dehydrogenase 28 436 9.9E-167 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 PIRSF PIRSF000099 2 439 1.1E-154 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 238 270 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 9 436 41.272 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 SUPERFAMILY SSF53720 29 436 3.92E-83 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 PANTHER PTHR21256 5 442 9.0E-197 T 22-04-2016 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 Gene3D G3DSA:3.40.50.1980 31 248 3.6E-80 T 22-04-2016 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 37 435 5.0E-157 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 PRINTS PR00083 Histidinol dehydrogenase signature 370 388 2.2E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 PRINTS PR00083 Histidinol dehydrogenase signature 209 234 2.2E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 PRINTS PR00083 Histidinol dehydrogenase signature 37 61 2.2E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 PRINTS PR00083 Histidinol dehydrogenase signature 145 171 2.2E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 PRINTS PR00083 Histidinol dehydrogenase signature 329 354 2.2E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 PRINTS PR00083 Histidinol dehydrogenase signature 238 259 2.2E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 PRINTS PR00083 Histidinol dehydrogenase signature 179 205 2.2E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS07005 f68e3caa6e1ddb07dbdaf09d35ae16dd 445 PRINTS PR00083 Histidinol dehydrogenase signature 260 279 2.2E-80 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 JE55_RS09540 bdfea2c9f58dac1fab0370af74f533e6 226 PRINTS PR01003 Flagellar assembly protein FliH signature 130 152 3.5E-21 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JE55_RS09540 bdfea2c9f58dac1fab0370af74f533e6 226 PRINTS PR01003 Flagellar assembly protein FliH signature 92 111 3.5E-21 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JE55_RS09540 bdfea2c9f58dac1fab0370af74f533e6 226 PRINTS PR01003 Flagellar assembly protein FliH signature 50 72 3.5E-21 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JE55_RS09540 bdfea2c9f58dac1fab0370af74f533e6 226 PRINTS PR01003 Flagellar assembly protein FliH signature 153 180 3.5E-21 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JE55_RS09540 bdfea2c9f58dac1fab0370af74f533e6 226 PRINTS PR01003 Flagellar assembly protein FliH signature 198 223 3.5E-21 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JE55_RS09540 bdfea2c9f58dac1fab0370af74f533e6 226 PRINTS PR01003 Flagellar assembly protein FliH signature 181 197 3.5E-21 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JE55_RS09540 bdfea2c9f58dac1fab0370af74f533e6 226 PRINTS PR01003 Flagellar assembly protein FliH signature 112 129 3.5E-21 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 JE55_RS09540 bdfea2c9f58dac1fab0370af74f533e6 226 PANTHER PTHR34982:SF1 53 220 1.1E-29 T 22-04-2016 JE55_RS09540 bdfea2c9f58dac1fab0370af74f533e6 226 Pfam PF02108 Flagellar assembly protein FliH 91 216 3.1E-38 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE JE55_RS09540 bdfea2c9f58dac1fab0370af74f533e6 226 PANTHER PTHR34982 53 220 1.1E-29 T 22-04-2016 JE55_RS15020 6762f964ecb4705ae47b399d75cea22d 491 SUPERFAMILY SSF53383 113 483 2.86E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS15020 6762f964ecb4705ae47b399d75cea22d 491 PANTHER PTHR11751:SF314 102 485 2.3E-166 T 22-04-2016 JE55_RS15020 6762f964ecb4705ae47b399d75cea22d 491 Pfam PF00155 Aminotransferase class I and II 164 466 1.2E-26 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS15020 6762f964ecb4705ae47b399d75cea22d 491 PANTHER PTHR11751 102 485 2.3E-166 T 22-04-2016 JE55_RS15020 6762f964ecb4705ae47b399d75cea22d 491 Gene3D G3DSA:3.40.640.10 162 365 1.1E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS15020 6762f964ecb4705ae47b399d75cea22d 491 Gene3D G3DSA:1.10.10.10 1 67 1.2E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15020 6762f964ecb4705ae47b399d75cea22d 491 Gene3D G3DSA:3.90.1150.10 366 466 5.8E-5 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS15020 6762f964ecb4705ae47b399d75cea22d 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.3E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS15020 6762f964ecb4705ae47b399d75cea22d 491 SMART SM00345 7 66 2.4E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS15020 6762f964ecb4705ae47b399d75cea22d 491 SUPERFAMILY SSF46785 2 70 5.69E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS03790 cdb96b018e9b2b071bec7a3eefc6bbc1 83 Pfam PF04226 Transglycosylase associated protein 34 82 2.2E-14 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 JE55_RS03790 cdb96b018e9b2b071bec7a3eefc6bbc1 83 PANTHER PTHR33884 4 82 2.5E-17 T 22-04-2016 JE55_RS16190 2c5a68785b95c533549feeb367bff135 156 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 155 26.202 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 JE55_RS16190 2c5a68785b95c533549feeb367bff135 156 Gene3D G3DSA:3.10.20.80 1 62 4.1E-26 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 JE55_RS16190 2c5a68785b95c533549feeb367bff135 156 SUPERFAMILY SSF54364 1 62 1.01E-22 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 JE55_RS16190 2c5a68785b95c533549feeb367bff135 156 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 61 6.8E-24 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 JE55_RS16190 2c5a68785b95c533549feeb367bff135 156 SUPERFAMILY SSF55200 67 156 4.58E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 JE55_RS16190 2c5a68785b95c533549feeb367bff135 156 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 155 1.9E-62 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 JE55_RS16190 2c5a68785b95c533549feeb367bff135 156 PANTHER PTHR10938 1 156 2.5E-59 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 JE55_RS16190 2c5a68785b95c533549feeb367bff135 156 Gene3D G3DSA:3.30.110.10 64 156 1.1E-41 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 JE55_RS16190 2c5a68785b95c533549feeb367bff135 156 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 68 153 6.0E-39 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 JE55_RS16190 2c5a68785b95c533549feeb367bff135 156 ProSitePatterns PS00938 Initiation factor 3 signature. 43 56 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 JE55_RS13515 7f72a8453868db06ef42f1232a450796 200 SUPERFAMILY SSF52540 20 189 7.38E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13515 7f72a8453868db06ef42f1232a450796 200 Pfam PF13521 AAA domain 23 186 3.1E-44 T 22-04-2016 JE55_RS13515 7f72a8453868db06ef42f1232a450796 200 Gene3D G3DSA:3.40.50.300 23 191 6.7E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS27050 ab118fcc6266d19fac884705300db1d1 122 PANTHER PTHR18866 66 120 9.3E-13 T 22-04-2016 JE55_RS27050 ab118fcc6266d19fac884705300db1d1 122 PANTHER PTHR18866 5 32 9.3E-13 T 22-04-2016 JE55_RS27050 ab118fcc6266d19fac884705300db1d1 122 SMART SM00797 1 122 0.0055 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B JE55_RS27050 ab118fcc6266d19fac884705300db1d1 122 Pfam PF02626 Allophanate hydrolase subunit 2 2 122 7.4E-19 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B JE55_RS15435 c453b723496b35b23ab01ab715efb68e 192 Gene3D G3DSA:3.40.50.360 83 185 1.3E-20 T 22-04-2016 IPR029039 Flavoprotein-like domain JE55_RS15435 c453b723496b35b23ab01ab715efb68e 192 SUPERFAMILY SSF52218 83 184 3.03E-12 T 22-04-2016 IPR029039 Flavoprotein-like domain JE55_RS04060 4e16f56e0525f0f158420775b0ed3110 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 3.8E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS04060 4e16f56e0525f0f158420775b0ed3110 266 Gene3D G3DSA:3.40.190.10 116 209 6.3E-18 T 22-04-2016 JE55_RS04060 4e16f56e0525f0f158420775b0ed3110 266 SMART SM00062 38 259 8.0E-66 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS04060 4e16f56e0525f0f158420775b0ed3110 266 Gene3D G3DSA:3.40.190.10 35 115 9.5E-45 T 22-04-2016 JE55_RS04060 4e16f56e0525f0f158420775b0ed3110 266 Gene3D G3DSA:3.40.190.10 218 260 9.5E-45 T 22-04-2016 JE55_RS04060 4e16f56e0525f0f158420775b0ed3110 266 PANTHER PTHR18966:SF191 27 257 2.8E-43 T 22-04-2016 JE55_RS04060 4e16f56e0525f0f158420775b0ed3110 266 SUPERFAMILY SSF53850 7 259 1.02E-67 T 22-04-2016 JE55_RS04060 4e16f56e0525f0f158420775b0ed3110 266 PANTHER PTHR18966 27 257 2.8E-43 T 22-04-2016 JE55_RS04060 4e16f56e0525f0f158420775b0ed3110 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 JE55_RS03190 c9085bee88616f6a9fa111b6dac871ed 368 PANTHER PTHR30100:SF1 1 340 2.9E-134 T 22-04-2016 JE55_RS03190 c9085bee88616f6a9fa111b6dac871ed 368 PANTHER PTHR30100 1 340 2.9E-134 T 22-04-2016 JE55_RS03190 c9085bee88616f6a9fa111b6dac871ed 368 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 155.68 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 JE55_RS03190 c9085bee88616f6a9fa111b6dac871ed 368 SUPERFAMILY SSF53659 4 332 2.38E-104 T 22-04-2016 JE55_RS03190 c9085bee88616f6a9fa111b6dac871ed 368 Pfam PF02504 Fatty acid synthesis protein 3 325 3.8E-110 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 JE55_RS03190 c9085bee88616f6a9fa111b6dac871ed 368 PIRSF PIRSF002465 1 336 1.0E-127 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 JE55_RS03190 c9085bee88616f6a9fa111b6dac871ed 368 Gene3D G3DSA:3.40.718.10 2 332 1.6E-133 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 JE55_RS03190 c9085bee88616f6a9fa111b6dac871ed 368 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 4 332 2.2E-108 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 JE55_RS04370 88c7702ecfcc5c829cca1a7f01c2307d 321 PANTHER PTHR10366:SF329 3 311 3.6E-68 T 22-04-2016 JE55_RS04370 88c7702ecfcc5c829cca1a7f01c2307d 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 224 1.6E-37 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 JE55_RS04370 88c7702ecfcc5c829cca1a7f01c2307d 321 PANTHER PTHR10366 3 311 3.6E-68 T 22-04-2016 JE55_RS04370 88c7702ecfcc5c829cca1a7f01c2307d 321 Gene3D G3DSA:3.40.50.720 2 311 4.2E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04370 88c7702ecfcc5c829cca1a7f01c2307d 321 SUPERFAMILY SSF51735 3 318 9.19E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12825 58829c94492ccdc53d1aec6b74f75378 67 PRINTS PR00050 Cold shock protein signature 25 34 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS12825 58829c94492ccdc53d1aec6b74f75378 67 PRINTS PR00050 Cold shock protein signature 40 58 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS12825 58829c94492ccdc53d1aec6b74f75378 67 PRINTS PR00050 Cold shock protein signature 4 19 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS12825 58829c94492ccdc53d1aec6b74f75378 67 SMART SM00357 3 67 5.9E-32 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 JE55_RS12825 58829c94492ccdc53d1aec6b74f75378 67 Gene3D G3DSA:2.40.50.140 1 65 7.9E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS12825 58829c94492ccdc53d1aec6b74f75378 67 PANTHER PTHR11544 1 67 1.5E-39 T 22-04-2016 JE55_RS12825 58829c94492ccdc53d1aec6b74f75378 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site JE55_RS12825 58829c94492ccdc53d1aec6b74f75378 67 SUPERFAMILY SSF50249 1 65 4.07E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS12825 58829c94492ccdc53d1aec6b74f75378 67 PIRSF PIRSF002599 1 67 2.0E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 JE55_RS12825 58829c94492ccdc53d1aec6b74f75378 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.8E-31 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS04480 0112f26465e94c6f797ffc61f2044c03 282 Pfam PF08543 Phosphomethylpyrimidine kinase 16 255 1.9E-54 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 JE55_RS04480 0112f26465e94c6f797ffc61f2044c03 282 Gene3D G3DSA:3.40.1190.20 7 261 1.3E-50 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS04480 0112f26465e94c6f797ffc61f2044c03 282 PANTHER PTHR20858 7 256 1.2E-20 T 22-04-2016 JE55_RS04480 0112f26465e94c6f797ffc61f2044c03 282 SUPERFAMILY SSF53613 5 264 2.45E-42 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS14455 2523f48eb7850edd7f20cf4577a1677c 496 PANTHER PTHR22773 1 487 1.5E-211 T 22-04-2016 JE55_RS14455 2523f48eb7850edd7f20cf4577a1677c 496 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 61 125 2.3E-5 T 22-04-2016 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692 JE55_RS14455 2523f48eb7850edd7f20cf4577a1677c 496 PANTHER PTHR22773:SF40 1 487 1.5E-211 T 22-04-2016 JE55_RS14455 2523f48eb7850edd7f20cf4577a1677c 496 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 486 1.4E-191 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 JE55_RS14455 2523f48eb7850edd7f20cf4577a1677c 496 Pfam PF00361 Proton-conducting membrane transporter 133 417 9.6E-79 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 JE55_RS14455 2523f48eb7850edd7f20cf4577a1677c 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 138 157 4.4E-51 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 JE55_RS14455 2523f48eb7850edd7f20cf4577a1677c 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 237 261 4.4E-51 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 JE55_RS14455 2523f48eb7850edd7f20cf4577a1677c 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 377 403 4.4E-51 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 JE55_RS14455 2523f48eb7850edd7f20cf4577a1677c 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 325 344 4.4E-51 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 JE55_RS14455 2523f48eb7850edd7f20cf4577a1677c 496 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 168 192 4.4E-51 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 1.3E-79 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PRINTS PR00097 Anthranilate synthase component II signature 164 177 8.1E-35 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PRINTS PR00097 Anthranilate synthase component II signature 119 131 8.1E-35 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PRINTS PR00097 Anthranilate synthase component II signature 99 107 8.1E-35 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PRINTS PR00097 Anthranilate synthase component II signature 2 16 8.1E-35 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PRINTS PR00097 Anthranilate synthase component II signature 47 56 8.1E-35 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PRINTS PR00097 Anthranilate synthase component II signature 74 85 8.1E-35 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 8.0E-8 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 8.0E-8 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 Gene3D G3DSA:3.40.50.880 2 190 2.6E-70 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 SUPERFAMILY SSF52317 1 190 2.9E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PANTHER PTHR11922:SF7 1 186 5.6E-97 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 Pfam PF00117 Glutamine amidotransferase class-I 4 187 5.2E-56 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PANTHER PTHR11922 1 186 5.6E-97 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 5.3E-14 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 5.3E-14 T 22-04-2016 JE55_RS06455 369d17e55576c0fc9a2ff6bb711dfe20 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 5.3E-14 T 22-04-2016 JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 SUPERFAMILY SSF81648 359 443 9.35E-22 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 SUPERFAMILY SSF81648 289 313 9.35E-22 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 PIRSF PIRSF038885 5 458 4.8E-149 T 22-04-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 286 433 1.9E-39 T 22-04-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 PANTHER PTHR19271:SF9 10 314 7.7E-218 T 22-04-2016 JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 PANTHER PTHR19271:SF9 360 443 7.7E-218 T 22-04-2016 JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 SUPERFAMILY SSF81342 21 288 1.02E-97 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 Pfam PF00033 Cytochrome b/b6/petB 32 220 3.8E-67 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 PANTHER PTHR19271 10 314 7.7E-218 T 22-04-2016 JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 PANTHER PTHR19271 360 443 7.7E-218 T 22-04-2016 JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 Gene3D G3DSA:1.20.810.10 15 315 1.7E-156 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain JE55_RS06915 c619cd65c714a035fa3de3a977586d50 460 Gene3D G3DSA:1.20.810.10 361 446 1.7E-156 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain JE55_RS07095 a811b5fb81278f79a548f2d9a47fb071 186 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 9 183 2.7E-24 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 JE55_RS07095 a811b5fb81278f79a548f2d9a47fb071 186 SUPERFAMILY SSF55144 9 184 5.41E-32 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase JE55_RS07095 a811b5fb81278f79a548f2d9a47fb071 186 PANTHER PTHR35561:SF1 6 186 8.3E-23 T 22-04-2016 JE55_RS07095 a811b5fb81278f79a548f2d9a47fb071 186 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 8 184 18.284 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 JE55_RS07095 a811b5fb81278f79a548f2d9a47fb071 186 PANTHER PTHR35561 6 186 8.3E-23 T 22-04-2016 JE55_RS07095 a811b5fb81278f79a548f2d9a47fb071 186 Gene3D G3DSA:3.90.1140.10 9 184 1.2E-35 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase JE55_RS07095 a811b5fb81278f79a548f2d9a47fb071 186 Pfam PF13563 2'-5' RNA ligase superfamily 27 164 5.9E-9 T 22-04-2016 JE55_RS02500 3a2776d8e3556eb61e64ecbb331b8f86 114 Pfam PF01883 Domain of unknown function DUF59 17 79 3.1E-17 T 22-04-2016 IPR002744 Domain of unknown function DUF59 JE55_RS02500 3a2776d8e3556eb61e64ecbb331b8f86 114 PANTHER PTHR13696 16 109 6.0E-17 T 22-04-2016 JE55_RS02500 3a2776d8e3556eb61e64ecbb331b8f86 114 PANTHER PTHR13696:SF62 16 109 6.0E-17 T 22-04-2016 JE55_RS02500 3a2776d8e3556eb61e64ecbb331b8f86 114 SUPERFAMILY SSF117916 14 111 1.77E-27 T 22-04-2016 JE55_RS05960 c19740ada36a61b963d934ace7076f28 544 Pfam PF00450 Serine carboxypeptidase 90 241 1.0E-11 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 JE55_RS05960 c19740ada36a61b963d934ace7076f28 544 SUPERFAMILY SSF53474 80 524 5.35E-61 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS05960 c19740ada36a61b963d934ace7076f28 544 Gene3D G3DSA:3.40.50.1820 73 521 1.4E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS22845 6af6981be7d6b5cd5eaf6de26a94a511 349 Pfam PF00155 Aminotransferase class I and II 61 340 8.9E-37 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS22845 6af6981be7d6b5cd5eaf6de26a94a511 349 PANTHER PTHR13693 44 348 9.7E-108 T 22-04-2016 JE55_RS22845 6af6981be7d6b5cd5eaf6de26a94a511 349 Gene3D G3DSA:3.40.640.10 78 308 4.7E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS22845 6af6981be7d6b5cd5eaf6de26a94a511 349 SUPERFAMILY SSF53383 22 346 5.19E-85 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS05545 f5e4caf586c5aed17ff5bfb6e876f9cd 77 PANTHER PTHR32071 10 76 1.2E-17 T 22-04-2016 JE55_RS05545 f5e4caf586c5aed17ff5bfb6e876f9cd 77 SUPERFAMILY SSF46689 10 76 8.51E-22 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS05545 f5e4caf586c5aed17ff5bfb6e876f9cd 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 40 57 2.1E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS05545 f5e4caf586c5aed17ff5bfb6e876f9cd 77 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 57 77 2.1E-12 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS05545 f5e4caf586c5aed17ff5bfb6e876f9cd 77 Pfam PF02954 Bacterial regulatory protein, Fis family 37 74 9.2E-16 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 JE55_RS05545 f5e4caf586c5aed17ff5bfb6e876f9cd 77 PIRSF PIRSF002097 1 77 6.6E-33 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 JE55_RS05545 f5e4caf586c5aed17ff5bfb6e876f9cd 77 Gene3D G3DSA:1.10.10.60 6 76 9.1E-26 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS12750 8583a1fc21a5fcd2021a88ff5d7c3051 424 SUPERFAMILY SSF141868 34 255 1.83E-39 T 22-04-2016 IPR001633 EAL domain JE55_RS12750 8583a1fc21a5fcd2021a88ff5d7c3051 424 Gene3D G3DSA:3.20.20.450 35 255 1.2E-33 T 22-04-2016 IPR001633 EAL domain JE55_RS12750 8583a1fc21a5fcd2021a88ff5d7c3051 424 PANTHER PTHR33121 37 296 2.5E-19 T 22-04-2016 JE55_RS12750 8583a1fc21a5fcd2021a88ff5d7c3051 424 SMART SM00052 24 259 1.2E-7 T 22-04-2016 IPR001633 EAL domain JE55_RS12750 8583a1fc21a5fcd2021a88ff5d7c3051 424 Gene3D G3DSA:3.30.450.20 321 420 2.4E-12 T 22-04-2016 JE55_RS12750 8583a1fc21a5fcd2021a88ff5d7c3051 424 SUPERFAMILY SSF103190 319 418 2.82E-11 T 22-04-2016 IPR029151 Periplasmic sensor domain-like JE55_RS12750 8583a1fc21a5fcd2021a88ff5d7c3051 424 Pfam PF00563 EAL domain 34 254 5.8E-37 T 22-04-2016 IPR001633 EAL domain JE55_RS08585 b137c1ff6bcb4e00f6c91799e4582e52 170 Pfam PF00856 SET domain 61 116 2.2E-13 T 22-04-2016 IPR001214 SET domain GO:0005515 JE55_RS08585 b137c1ff6bcb4e00f6c91799e4582e52 170 PANTHER PTHR22884 4 135 1.1E-26 T 22-04-2016 JE55_RS08585 b137c1ff6bcb4e00f6c91799e4582e52 170 PANTHER PTHR22884:SF336 4 135 1.1E-26 T 22-04-2016 JE55_RS08585 b137c1ff6bcb4e00f6c91799e4582e52 170 Gene3D G3DSA:2.170.270.10 5 145 3.2E-41 T 22-04-2016 JE55_RS08585 b137c1ff6bcb4e00f6c91799e4582e52 170 SMART SM00317 4 122 3.9E-28 T 22-04-2016 IPR001214 SET domain GO:0005515 JE55_RS08585 b137c1ff6bcb4e00f6c91799e4582e52 170 SUPERFAMILY SSF82199 5 142 8.5E-42 T 22-04-2016 JE55_RS04420 e2f4dfb047133130cc2f3fabd30f0bf9 183 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 176 4.6E-71 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 JE55_RS04420 e2f4dfb047133130cc2f3fabd30f0bf9 183 PANTHER PTHR21047 1 181 4.2E-75 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 JE55_RS04420 e2f4dfb047133130cc2f3fabd30f0bf9 183 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 4 182 8.0E-101 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 JE55_RS04420 e2f4dfb047133130cc2f3fabd30f0bf9 183 PANTHER PTHR21047:SF2 1 181 4.2E-75 T 22-04-2016 JE55_RS04420 e2f4dfb047133130cc2f3fabd30f0bf9 183 SUPERFAMILY SSF51182 2 181 3.83E-74 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS04420 e2f4dfb047133130cc2f3fabd30f0bf9 183 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 179 3.1E-81 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 JE55_RS04420 e2f4dfb047133130cc2f3fabd30f0bf9 183 Gene3D G3DSA:2.60.120.10 4 180 4.5E-79 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS12890 10d875bd59037187534e3e00f940d617 450 Gene3D G3DSA:3.30.70.100 333 414 8.9E-17 T 22-04-2016 JE55_RS12890 10d875bd59037187534e3e00f940d617 450 SUPERFAMILY SSF82861 173 257 3.14E-10 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 JE55_RS12890 10d875bd59037187534e3e00f940d617 450 Gene3D G3DSA:2.30.30.60 275 322 1.5E-13 T 22-04-2016 JE55_RS12890 10d875bd59037187534e3e00f940d617 450 Pfam PF00924 Mechanosensitive ion channel 219 416 5.2E-44 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JE55_RS12890 10d875bd59037187534e3e00f940d617 450 PANTHER PTHR30347 22 448 5.3E-63 T 22-04-2016 JE55_RS12890 10d875bd59037187534e3e00f940d617 450 SUPERFAMILY SSF50182 259 324 3.17E-15 T 22-04-2016 IPR010920 LSM domain JE55_RS12890 10d875bd59037187534e3e00f940d617 450 SUPERFAMILY SSF82689 331 425 1.29E-23 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 JE55_RS13555 ad7d20530d67bdffe760f82965dc7cd5 378 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 135 357 5.0E-51 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 JE55_RS13555 ad7d20530d67bdffe760f82965dc7cd5 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 241 254 1.6E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JE55_RS13555 ad7d20530d67bdffe760f82965dc7cd5 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 214 231 1.6E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JE55_RS13555 ad7d20530d67bdffe760f82965dc7cd5 378 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 164 175 1.6E-12 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 JE55_RS13555 ad7d20530d67bdffe760f82965dc7cd5 378 PANTHER PTHR21581:SF8 129 373 1.1E-79 T 22-04-2016 JE55_RS13555 ad7d20530d67bdffe760f82965dc7cd5 378 Gene3D G3DSA:3.40.710.10 136 373 6.4E-62 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS13555 ad7d20530d67bdffe760f82965dc7cd5 378 PANTHER PTHR21581 129 373 1.1E-79 T 22-04-2016 JE55_RS13555 ad7d20530d67bdffe760f82965dc7cd5 378 SUPERFAMILY SSF56601 113 373 2.18E-54 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS04585 ddfc8788fae0f5aaf0ace20d7d577322 699 PIRSF PIRSF011409 1 699 0.0 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 JE55_RS04585 ddfc8788fae0f5aaf0ace20d7d577322 699 Pfam PF10605 3HB-oligomer hydrolase (3HBOH) 24 698 0.0 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 JE55_RS04585 ddfc8788fae0f5aaf0ace20d7d577322 699 Hamap MF_01906 D-(-)-3-hydroxybutyrate oligomer hydrolase. 3 699 31.861 T 22-04-2016 IPR016582 D-(-)-3-hydroxybutyrate oligomer hydrolase, putative GO:0005615|GO:0019605|GO:0047989 KEGG: 00650+3.1.1.22|UniPathway: UPA00863 JE55_RS04585 ddfc8788fae0f5aaf0ace20d7d577322 699 SUPERFAMILY SSF53474 554 615 4.44E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS04585 ddfc8788fae0f5aaf0ace20d7d577322 699 SUPERFAMILY SSF53474 258 371 4.44E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS04585 ddfc8788fae0f5aaf0ace20d7d577322 699 SUPERFAMILY SSF53474 149 207 4.44E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS04585 ddfc8788fae0f5aaf0ace20d7d577322 699 Gene3D G3DSA:3.40.50.1820 259 364 1.7E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS04585 ddfc8788fae0f5aaf0ace20d7d577322 699 Gene3D G3DSA:3.40.50.1820 146 204 1.7E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS04585 ddfc8788fae0f5aaf0ace20d7d577322 699 Gene3D G3DSA:3.40.50.1820 553 623 1.7E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS01015 9ed4cbe9d60542de927f67b999e25452 198 Gene3D G3DSA:3.40.140.10 28 177 8.9E-63 T 22-04-2016 JE55_RS01015 9ed4cbe9d60542de927f67b999e25452 198 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 82 119 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JE55_RS01015 9ed4cbe9d60542de927f67b999e25452 198 Pfam PF14437 MafB19-like deaminase 33 178 1.3E-29 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 JE55_RS01015 9ed4cbe9d60542de927f67b999e25452 198 SUPERFAMILY SSF53927 30 181 7.7E-58 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 JE55_RS01015 9ed4cbe9d60542de927f67b999e25452 198 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 37 178 50.008 T 22-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 JE55_RS01015 9ed4cbe9d60542de927f67b999e25452 198 PANTHER PTHR11079 27 178 1.5E-49 T 22-04-2016 JE55_RS15400 ca81fee55d5ac2376058717420beb85f 173 Pfam PF15648 Restriction endonuclease fold toxin 5 58 152 1.4E-36 T 22-04-2016 IPR028904 Tox-REase-5 domain JE55_RS12175 495b6ba41daf085d6bb80a930c8fb8b9 203 Pfam PF11136 Protein of unknown function (DUF2889) 13 136 3.9E-43 T 22-04-2016 IPR021312 Protein of unknown function DUF2889 JE55_RS16790 8b66fdfd5c119cfb04793eb3a13a65cf 337 PANTHER PTHR32196 32 336 1.1E-101 T 22-04-2016 JE55_RS16790 8b66fdfd5c119cfb04793eb3a13a65cf 337 PANTHER PTHR32196:SF35 32 336 1.1E-101 T 22-04-2016 JE55_RS16790 8b66fdfd5c119cfb04793eb3a13a65cf 337 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 325 5.4E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS13040 ae304f6aa69a343cef74f94dacd01126 187 PANTHER PTHR10245 4 184 1.4E-33 T 22-04-2016 JE55_RS13040 ae304f6aa69a343cef74f94dacd01126 187 SUPERFAMILY SSF47413 4 63 2.09E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS13040 ae304f6aa69a343cef74f94dacd01126 187 Pfam PF01381 Helix-turn-helix 5 58 4.4E-16 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JE55_RS13040 ae304f6aa69a343cef74f94dacd01126 187 Gene3D G3DSA:1.10.260.40 4 91 1.4E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS13040 ae304f6aa69a343cef74f94dacd01126 187 SUPERFAMILY SSF51182 70 176 2.17E-23 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS13040 ae304f6aa69a343cef74f94dacd01126 187 Gene3D G3DSA:2.60.120.10 92 179 1.3E-16 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS13040 ae304f6aa69a343cef74f94dacd01126 187 SMART SM00530 4 59 4.7E-17 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JE55_RS13040 ae304f6aa69a343cef74f94dacd01126 187 Pfam PF07883 Cupin domain 111 175 5.2E-13 T 22-04-2016 IPR013096 Cupin 2, conserved barrel JE55_RS08285 b00bca63d9c844e61cf31d4eb5f4f3b4 469 PANTHER PTHR11785:SF337 20 458 1.6E-136 T 22-04-2016 JE55_RS08285 b00bca63d9c844e61cf31d4eb5f4f3b4 469 Pfam PF13520 Amino acid permease 24 424 2.0E-41 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS08285 b00bca63d9c844e61cf31d4eb5f4f3b4 469 PANTHER PTHR11785 20 458 1.6E-136 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS08285 b00bca63d9c844e61cf31d4eb5f4f3b4 469 PIRSF PIRSF006060 13 467 4.2E-70 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS08285 b00bca63d9c844e61cf31d4eb5f4f3b4 469 TIGRFAM TIGR00908 2A0305: ethanolamine permease 17 465 1.1E-226 T 22-04-2016 IPR004757 Ethanolamine permease JE55_RS14545 4997ccbe5f79b5ee0391b8359da7bb44 260 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 257 36.096 T 22-04-2016 IPR005583 Peroxide stress protein YaaA JE55_RS14545 4997ccbe5f79b5ee0391b8359da7bb44 260 Pfam PF03883 Protein of unknown function (DUF328) 1 245 1.3E-91 T 22-04-2016 IPR005583 Peroxide stress protein YaaA JE55_RS14545 4997ccbe5f79b5ee0391b8359da7bb44 260 PANTHER PTHR30283:SF3 2 256 6.2E-106 T 22-04-2016 JE55_RS14545 4997ccbe5f79b5ee0391b8359da7bb44 260 PANTHER PTHR30283 2 256 6.2E-106 T 22-04-2016 JE55_RS10785 1853a001151ad1a75e4d8fc1384ff805 369 PANTHER PTHR35457 260 368 1.6E-57 T 22-04-2016 JE55_RS10785 1853a001151ad1a75e4d8fc1384ff805 369 PANTHER PTHR35457 87 237 1.6E-57 T 22-04-2016 JE55_RS10785 1853a001151ad1a75e4d8fc1384ff805 369 PANTHER PTHR35457 4 71 1.6E-57 T 22-04-2016 JE55_RS10785 1853a001151ad1a75e4d8fc1384ff805 369 PANTHER PTHR35457:SF1 260 368 1.6E-57 T 22-04-2016 JE55_RS10785 1853a001151ad1a75e4d8fc1384ff805 369 PANTHER PTHR35457:SF1 87 237 1.6E-57 T 22-04-2016 JE55_RS10785 1853a001151ad1a75e4d8fc1384ff805 369 PANTHER PTHR35457:SF1 4 71 1.6E-57 T 22-04-2016 JE55_RS10785 1853a001151ad1a75e4d8fc1384ff805 369 Pfam PF02628 Cytochrome oxidase assembly protein 32 345 4.4E-86 T 22-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 JE55_RS07460 03012b6503282744cdfbac418b7a8bb0 126 Gene3D G3DSA:1.20.5.1030 64 121 3.0E-24 T 22-04-2016 JE55_RS07460 03012b6503282744cdfbac418b7a8bb0 126 PANTHER PTHR33910:SF1 1 126 1.8E-15 T 22-04-2016 JE55_RS07460 03012b6503282744cdfbac418b7a8bb0 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 65 125 11.584 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE JE55_RS07460 03012b6503282744cdfbac418b7a8bb0 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 69 118 2.7E-18 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 JE55_RS07460 03012b6503282744cdfbac418b7a8bb0 126 PRINTS PR01650 Bacterial translocase SecE signature 88 108 7.7E-15 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 JE55_RS07460 03012b6503282744cdfbac418b7a8bb0 126 PRINTS PR01650 Bacterial translocase SecE signature 43 64 7.7E-15 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 JE55_RS07460 03012b6503282744cdfbac418b7a8bb0 126 PRINTS PR01650 Bacterial translocase SecE signature 64 84 7.7E-15 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 JE55_RS07460 03012b6503282744cdfbac418b7a8bb0 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 67 121 8.2E-18 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 JE55_RS07460 03012b6503282744cdfbac418b7a8bb0 126 PANTHER PTHR33910 1 126 1.8E-15 T 22-04-2016 JE55_RS00360 22048681e8d48908bacd89391ec7e902 123 Pfam PF00893 Small Multidrug Resistance protein 48 113 6.6E-8 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 JE55_RS00360 22048681e8d48908bacd89391ec7e902 123 SUPERFAMILY SSF103481 46 122 8.24E-13 T 22-04-2016 JE55_RS00360 22048681e8d48908bacd89391ec7e902 123 PANTHER PTHR30561 47 123 6.0E-15 T 22-04-2016 JE55_RS00360 22048681e8d48908bacd89391ec7e902 123 PANTHER PTHR30561:SF9 47 123 6.0E-15 T 22-04-2016 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PANTHER PTHR22912:SF48 1 315 7.1E-156 T 22-04-2016 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PANTHER PTHR22912 1 315 7.1E-156 T 22-04-2016 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 Gene3D G3DSA:3.50.50.60 111 307 3.2E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 1.2E-117 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 Gene3D G3DSA:3.50.50.60 4 110 1.4E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 SUPERFAMILY SSF51905 1 313 1.67E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.8E-40 T 22-04-2016 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.8E-40 T 22-04-2016 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.8E-40 T 22-04-2016 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.8E-40 T 22-04-2016 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.8E-40 T 22-04-2016 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 1.2E-75 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.2E-75 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.2E-75 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.2E-75 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 1.2E-75 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 1.2E-75 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.2E-75 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.2E-75 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.2E-75 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 JE55_RS04010 bc4593d08c301e4ecbf7e517ba36c634 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 1.7E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS08235 ff5fb88e4d0204a4442259d9e6397039 372 Pfam PF05426 Alginate lyase 67 302 1.1E-43 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 JE55_RS08235 ff5fb88e4d0204a4442259d9e6397039 372 Gene3D G3DSA:1.50.10.110 31 306 9.8E-24 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 JE55_RS08235 ff5fb88e4d0204a4442259d9e6397039 372 SUPERFAMILY SSF48230 89 310 1.74E-30 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase JE55_RS08700 f06b6d9c7973721357d4b9336476b331 538 Pfam PF02321 Outer membrane efflux protein 292 474 1.2E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS08700 f06b6d9c7973721357d4b9336476b331 538 Pfam PF02321 Outer membrane efflux protein 75 267 1.3E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS08700 f06b6d9c7973721357d4b9336476b331 538 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 20 476 3.8E-133 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 JE55_RS08700 f06b6d9c7973721357d4b9336476b331 538 Gene3D G3DSA:1.20.1600.10 64 479 1.9E-111 T 22-04-2016 JE55_RS08700 f06b6d9c7973721357d4b9336476b331 538 PANTHER PTHR30203 1 495 1.0E-130 T 22-04-2016 JE55_RS08700 f06b6d9c7973721357d4b9336476b331 538 SUPERFAMILY SSF56954 66 479 3.27E-110 T 22-04-2016 JE55_RS08700 f06b6d9c7973721357d4b9336476b331 538 SUPERFAMILY SSF56954 6 37 3.27E-110 T 22-04-2016 JE55_RS08700 f06b6d9c7973721357d4b9336476b331 538 PANTHER PTHR30203:SF7 1 495 1.0E-130 T 22-04-2016 JE55_RS15185 eb9b4382f2d5577293bfe0c03abcf3ab 380 SUPERFAMILY SSF159245 143 376 2.22E-5 T 22-04-2016 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 Pfam PF11808 Domain of unknown function (DUF3329) 5 90 2.0E-18 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 SMART SM00388 206 272 2.2E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 Gene3D G3DSA:3.30.565.10 258 428 6.2E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 426 3.2E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 271 5.5E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 SUPERFAMILY SSF55785 88 193 9.14E-7 T 22-04-2016 IPR000014 PAS domain JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 SUPERFAMILY SSF47384 193 271 8.24E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 PANTHER PTHR24423 1 429 4.8E-113 T 22-04-2016 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 Gene3D G3DSA:3.30.450.20 93 197 1.1E-12 T 22-04-2016 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 SMART SM00387 316 428 1.5E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 94 424 4.6E-138 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 SUPERFAMILY SSF55874 262 426 1.83E-43 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 1.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 1.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 1.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 1.5E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 Gene3D G3DSA:1.10.287.130 198 257 3.2E-21 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS15275 7b2e2cdb308393b1c28e6a30025c6018 436 PANTHER PTHR24423:SF554 1 429 4.8E-113 T 22-04-2016 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 PANTHER PTHR10357:SF137 603 1101 7.5E-226 T 22-04-2016 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 PANTHER PTHR10357:SF137 408 570 7.5E-226 T 22-04-2016 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 Pfam PF11896 Domain of unknown function (DUF3416) 445 631 8.3E-52 T 22-04-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 SUPERFAMILY SSF51445 4 321 5.28E-36 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 PANTHER PTHR10357 603 1101 7.5E-226 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 Gene3D G3DSA:3.20.20.80 508 549 3.2E-74 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 Gene3D G3DSA:3.20.20.80 613 991 3.2E-74 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 Gene3D G3DSA:3.20.20.80 11 321 2.7E-16 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 SMART SM00642 641 986 1.4E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 443 1092 47.011 T 22-04-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 Pfam PF00128 Alpha amylase, catalytic domain 655 760 7.7E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 PANTHER PTHR10357 408 570 7.5E-226 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 JE55_RS15470 16ae1e65b84b6334935e8b48a37d1570 1115 SUPERFAMILY SSF51445 614 993 4.74E-89 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS14235 642fda91964c4843a674eb49beb0ab6f 243 PANTHER PTHR11777 1 239 2.5E-50 T 22-04-2016 JE55_RS14235 642fda91964c4843a674eb49beb0ab6f 243 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 196 239 4.5E-11 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 JE55_RS14235 642fda91964c4843a674eb49beb0ab6f 243 SMART SM00863 196 239 4.2E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 JE55_RS14235 642fda91964c4843a674eb49beb0ab6f 243 Pfam PF01411 tRNA synthetases class II (A) 18 66 1.1E-6 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 JE55_RS14235 642fda91964c4843a674eb49beb0ab6f 243 SUPERFAMILY SSF50447 2 67 3.32E-13 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain JE55_RS14235 642fda91964c4843a674eb49beb0ab6f 243 SUPERFAMILY SSF55186 104 239 1.96E-28 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.5E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.5E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.5E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PANTHER PTHR24322 12 140 2.1E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PANTHER PTHR24322 156 188 2.1E-62 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 1.3E-69 T 22-04-2016 JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PANTHER PTHR24322:SF635 12 140 2.1E-62 T 22-04-2016 JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PANTHER PTHR24322:SF635 156 188 2.1E-62 T 22-04-2016 JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 192 2.1E-5 T 22-04-2016 JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 246 1.3E-101 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 Gene3D G3DSA:3.40.50.720 2 248 2.1E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 SUPERFAMILY SSF51735 7 248 3.56E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.7E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 7.7E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.7E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.7E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 7.7E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS03175 df8d73e996053505a8617aeda289fbb8 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.7E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS07515 9ba02a846db4700fb485b4d08dcfdfab 424 SUPERFAMILY SSF52266 208 412 5.04E-42 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS07515 9ba02a846db4700fb485b4d08dcfdfab 424 Gene3D G3DSA:3.40.50.1110 209 413 4.6E-29 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS07515 9ba02a846db4700fb485b4d08dcfdfab 424 PANTHER PTHR30383 312 415 5.9E-82 T 22-04-2016 JE55_RS07515 9ba02a846db4700fb485b4d08dcfdfab 424 PANTHER PTHR30383 57 295 5.9E-82 T 22-04-2016 JE55_RS07515 9ba02a846db4700fb485b4d08dcfdfab 424 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 211 407 3.8E-26 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS07515 9ba02a846db4700fb485b4d08dcfdfab 424 PANTHER PTHR30383:SF3 312 415 5.9E-82 T 22-04-2016 JE55_RS07515 9ba02a846db4700fb485b4d08dcfdfab 424 PANTHER PTHR30383:SF3 57 295 5.9E-82 T 22-04-2016 JE55_RS27210 a0340ee79af813ee61fd576b3fce0ec1 306 Pfam PF01566 Natural resistance-associated macrophage protein 2 306 1.7E-59 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS01570 cf6799d445496b5e192afa2402614290 344 Gene3D G3DSA:3.40.50.300 112 278 1.8E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01570 cf6799d445496b5e192afa2402614290 344 PANTHER PTHR33844 55 229 2.4E-20 T 22-04-2016 JE55_RS01570 cf6799d445496b5e192afa2402614290 344 PANTHER PTHR33844:SF1 55 229 2.4E-20 T 22-04-2016 JE55_RS01570 cf6799d445496b5e192afa2402614290 344 Pfam PF13469 Sulfotransferase family 197 278 1.3E-6 T 22-04-2016 JE55_RS01570 cf6799d445496b5e192afa2402614290 344 SUPERFAMILY SSF52540 112 290 1.52E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02550 76bc6cab923d9787ea6d4ebd02e9fe5e 405 PANTHER PTHR32332 9 56 3.3E-84 T 22-04-2016 JE55_RS02550 76bc6cab923d9787ea6d4ebd02e9fe5e 405 PANTHER PTHR32332 79 401 3.3E-84 T 22-04-2016 JE55_RS02550 76bc6cab923d9787ea6d4ebd02e9fe5e 405 Gene3D G3DSA:3.20.20.70 20 331 1.3E-36 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS02550 76bc6cab923d9787ea6d4ebd02e9fe5e 405 SUPERFAMILY SSF51412 10 306 1.43E-36 T 22-04-2016 JE55_RS02550 76bc6cab923d9787ea6d4ebd02e9fe5e 405 PANTHER PTHR32332:SF18 9 56 3.3E-84 T 22-04-2016 JE55_RS02550 76bc6cab923d9787ea6d4ebd02e9fe5e 405 PANTHER PTHR32332:SF18 79 401 3.3E-84 T 22-04-2016 JE55_RS02550 76bc6cab923d9787ea6d4ebd02e9fe5e 405 Pfam PF03060 Nitronate monooxygenase 22 380 3.7E-34 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 JE55_RS03185 c81d18eb36b49f4ae59dd2eb04839a21 329 PANTHER PTHR18919 36 329 2.6E-133 T 22-04-2016 JE55_RS03185 c81d18eb36b49f4ae59dd2eb04839a21 329 Gene3D G3DSA:3.40.47.10 172 328 1.1E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS03185 c81d18eb36b49f4ae59dd2eb04839a21 329 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 240 328 5.7E-36 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 JE55_RS03185 c81d18eb36b49f4ae59dd2eb04839a21 329 PANTHER PTHR18919:SF109 36 329 2.6E-133 T 22-04-2016 JE55_RS03185 c81d18eb36b49f4ae59dd2eb04839a21 329 Gene3D G3DSA:3.40.47.10 7 171 2.9E-65 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS03185 c81d18eb36b49f4ae59dd2eb04839a21 329 SUPERFAMILY SSF53901 8 329 3.32E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS03185 c81d18eb36b49f4ae59dd2eb04839a21 329 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 7 329 5.9E-123 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 JE55_RS03185 c81d18eb36b49f4ae59dd2eb04839a21 329 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 194 2.7E-34 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 JE55_RS03185 c81d18eb36b49f4ae59dd2eb04839a21 329 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 6 329 70.194 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 JE55_RS08210 27f84c38fbaaa1b9d75f2eb285891dac 350 PANTHER PTHR22604 1 345 6.1E-109 T 22-04-2016 JE55_RS08210 27f84c38fbaaa1b9d75f2eb285891dac 350 Gene3D G3DSA:3.40.50.720 1 130 1.8E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS08210 27f84c38fbaaa1b9d75f2eb285891dac 350 Gene3D G3DSA:3.30.360.10 131 341 3.4E-43 T 22-04-2016 JE55_RS08210 27f84c38fbaaa1b9d75f2eb285891dac 350 PANTHER PTHR22604:SF53 1 345 6.1E-109 T 22-04-2016 JE55_RS08210 27f84c38fbaaa1b9d75f2eb285891dac 350 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 210 1.4E-13 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 JE55_RS08210 27f84c38fbaaa1b9d75f2eb285891dac 350 SUPERFAMILY SSF51735 2 201 2.53E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS08210 27f84c38fbaaa1b9d75f2eb285891dac 350 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 118 1.7E-23 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 JE55_RS07125 17d460c2b48ffaddbe5b331143385f45 253 PANTHER PTHR23344 7 244 1.5E-71 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 JE55_RS07125 17d460c2b48ffaddbe5b331143385f45 253 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 15 242 2.7E-40 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 JE55_RS07125 17d460c2b48ffaddbe5b331143385f45 253 PANTHER PTHR23344:SF20 7 244 1.5E-71 T 22-04-2016 JE55_RS07125 17d460c2b48ffaddbe5b331143385f45 253 Gene3D G3DSA:3.20.20.190 4 244 3.1E-61 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 JE55_RS07125 17d460c2b48ffaddbe5b331143385f45 253 SUPERFAMILY SSF51695 8 243 3.92E-61 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 JE55_RS02440 6a7ce5c32091d526c39b268a1e95c808 219 PANTHER PTHR37943 8 153 1.7E-43 T 22-04-2016 JE55_RS02440 6a7ce5c32091d526c39b268a1e95c808 219 Gene3D G3DSA:2.60.120.10 121 186 1.1E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS02440 6a7ce5c32091d526c39b268a1e95c808 219 Pfam PF05962 HutD 17 203 9.4E-60 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves JE55_RS02440 6a7ce5c32091d526c39b268a1e95c808 219 SUPERFAMILY SSF51182 9 211 1.96E-53 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS02440 6a7ce5c32091d526c39b268a1e95c808 219 Gene3D G3DSA:2.60.120.10 18 120 7.6E-40 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS02440 6a7ce5c32091d526c39b268a1e95c808 219 PANTHER PTHR37943:SF1 8 153 1.7E-43 T 22-04-2016 JE55_RS05795 b2f4f2362b20438cd6c8752382dbf84e 261 PANTHER PTHR37482 1 166 2.4E-28 T 22-04-2016 JE55_RS05795 b2f4f2362b20438cd6c8752382dbf84e 261 PANTHER PTHR37482:SF1 1 166 2.4E-28 T 22-04-2016 JE55_RS05795 b2f4f2362b20438cd6c8752382dbf84e 261 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 118 26.452 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE JE55_RS05795 b2f4f2362b20438cd6c8752382dbf84e 261 Pfam PF04355 SmpA / OmlA family 41 108 1.3E-25 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 JE55_RS09220 bc26e656853459acca6e14ac2afe780a 327 PANTHER PTHR11138 5 321 1.9E-105 T 22-04-2016 JE55_RS09220 bc26e656853459acca6e14ac2afe780a 327 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 314 5.8E-85 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS09220 bc26e656853459acca6e14ac2afe780a 327 Gene3D G3DSA:3.10.25.10 219 321 3.2E-33 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS09220 bc26e656853459acca6e14ac2afe780a 327 Pfam PF02911 Formyl transferase, C-terminal domain 216 313 8.4E-25 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS09220 bc26e656853459acca6e14ac2afe780a 327 SUPERFAMILY SSF53328 4 216 7.33E-61 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS09220 bc26e656853459acca6e14ac2afe780a 327 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 316 35.246 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS09220 bc26e656853459acca6e14ac2afe780a 327 SUPERFAMILY SSF50486 217 321 5.1E-31 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 JE55_RS09220 bc26e656853459acca6e14ac2afe780a 327 Pfam PF00551 Formyl transferase 7 192 4.6E-42 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS09220 bc26e656853459acca6e14ac2afe780a 327 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 144 167 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS09220 bc26e656853459acca6e14ac2afe780a 327 Gene3D G3DSA:3.40.50.170 4 217 2.1E-74 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS07740 3b55dc7f4a3b2a2fc6709d88a0600995 156 Pfam PF12728 Helix-turn-helix domain 86 133 1.8E-7 T 22-04-2016 JE55_RS07740 3b55dc7f4a3b2a2fc6709d88a0600995 156 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 86 131 1.0E-11 T 22-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 JE55_RS01030 227a5dd30f2ed94ff4faddc6515df810 406 Pfam PF07690 Major Facilitator Superfamily 19 262 3.9E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS01030 227a5dd30f2ed94ff4faddc6515df810 406 Gene3D G3DSA:1.20.1250.20 11 183 6.5E-16 T 22-04-2016 JE55_RS01030 227a5dd30f2ed94ff4faddc6515df810 406 Gene3D G3DSA:1.20.1250.20 218 394 2.9E-12 T 22-04-2016 JE55_RS01030 227a5dd30f2ed94ff4faddc6515df810 406 PANTHER PTHR23501:SF79 5 388 7.0E-126 T 22-04-2016 JE55_RS01030 227a5dd30f2ed94ff4faddc6515df810 406 PANTHER PTHR23501 5 388 7.0E-126 T 22-04-2016 JE55_RS01030 227a5dd30f2ed94ff4faddc6515df810 406 SUPERFAMILY SSF103473 9 392 2.62E-42 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS13695 133fc260c85c0ee35164de71fdedfc38 420 Gene3D G3DSA:3.40.630.10 11 231 2.3E-113 T 22-04-2016 JE55_RS13695 133fc260c85c0ee35164de71fdedfc38 420 Gene3D G3DSA:3.40.630.10 357 415 2.3E-113 T 22-04-2016 JE55_RS13695 133fc260c85c0ee35164de71fdedfc38 420 SUPERFAMILY SSF53187 8 229 1.59E-90 T 22-04-2016 JE55_RS13695 133fc260c85c0ee35164de71fdedfc38 420 SUPERFAMILY SSF53187 342 414 1.59E-90 T 22-04-2016 JE55_RS13695 133fc260c85c0ee35164de71fdedfc38 420 PANTHER PTHR32494:SF6 13 415 6.2E-154 T 22-04-2016 JE55_RS13695 133fc260c85c0ee35164de71fdedfc38 420 SUPERFAMILY SSF55031 219 333 6.45E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain JE55_RS13695 133fc260c85c0ee35164de71fdedfc38 420 Pfam PF01546 Peptidase family M20/M25/M40 86 411 1.1E-35 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 JE55_RS13695 133fc260c85c0ee35164de71fdedfc38 420 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 16 413 3.0E-125 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 JE55_RS13695 133fc260c85c0ee35164de71fdedfc38 420 PANTHER PTHR32494 13 415 6.2E-154 T 22-04-2016 JE55_RS13695 133fc260c85c0ee35164de71fdedfc38 420 PIRSF PIRSF001235 10 419 2.6E-140 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 JE55_RS13695 133fc260c85c0ee35164de71fdedfc38 420 Gene3D G3DSA:3.30.70.360 232 334 8.0E-35 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain JE55_RS05505 c4c61577ccdd56f169a17ad5a2a89278 379 SMART SM01002 145 322 1.3E-79 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JE55_RS05505 c4c61577ccdd56f169a17ad5a2a89278 379 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.4E-43 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JE55_RS05505 c4c61577ccdd56f169a17ad5a2a89278 379 Gene3D G3DSA:3.40.50.1770 2 172 2.5E-62 T 22-04-2016 JE55_RS05505 c4c61577ccdd56f169a17ad5a2a89278 379 SMART SM01003 4 136 1.5E-68 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JE55_RS05505 c4c61577ccdd56f169a17ad5a2a89278 379 Gene3D G3DSA:3.40.50.720 173 201 4.3E-7 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05505 c4c61577ccdd56f169a17ad5a2a89278 379 SUPERFAMILY SSF52283 1 167 4.17E-52 T 22-04-2016 JE55_RS05505 c4c61577ccdd56f169a17ad5a2a89278 379 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 378 3.3E-69 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JE55_RS05505 c4c61577ccdd56f169a17ad5a2a89278 379 Gene3D G3DSA:3.40.50.1770 202 376 1.0E-37 T 22-04-2016 JE55_RS05505 c4c61577ccdd56f169a17ad5a2a89278 379 SUPERFAMILY SSF51735 153 343 3.63E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05505 c4c61577ccdd56f169a17ad5a2a89278 379 PANTHER PTHR10160 1 379 1.6E-163 T 22-04-2016 JE55_RS16255 70a406b6bff52468bb914f40c93c84d1 96 PANTHER PTHR33336 1 91 1.6E-24 T 22-04-2016 JE55_RS16255 70a406b6bff52468bb914f40c93c84d1 96 Gene3D G3DSA:3.30.70.900 4 95 3.8E-30 T 22-04-2016 JE55_RS16255 70a406b6bff52468bb914f40c93c84d1 96 SUPERFAMILY SSF54909 1 89 3.14E-26 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS16255 70a406b6bff52468bb914f40c93c84d1 96 PANTHER PTHR33336:SF5 1 91 1.6E-24 T 22-04-2016 JE55_RS16255 70a406b6bff52468bb914f40c93c84d1 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 78 3.6E-19 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain JE55_RS03480 84ef66ec2a2af00ef8965bce32550ec0 389 Pfam PF07995 Glucose / Sorbosone dehydrogenase 154 375 4.7E-15 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 JE55_RS03480 84ef66ec2a2af00ef8965bce32550ec0 389 PANTHER PTHR19328 32 385 8.2E-99 T 22-04-2016 JE55_RS03480 84ef66ec2a2af00ef8965bce32550ec0 389 SUPERFAMILY SSF50952 39 387 2.62E-36 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 JE55_RS03480 84ef66ec2a2af00ef8965bce32550ec0 389 PANTHER PTHR19328:SF33 32 385 8.2E-99 T 22-04-2016 JE55_RS03480 84ef66ec2a2af00ef8965bce32550ec0 389 Gene3D G3DSA:2.120.10.30 38 387 3.0E-69 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like JE55_RS13230 256246e9fe107c9d1507a0e328516a43 120 PANTHER PTHR33452 3 120 2.7E-18 T 22-04-2016 JE55_RS13230 256246e9fe107c9d1507a0e328516a43 120 PANTHER PTHR33452:SF1 3 120 2.7E-18 T 22-04-2016 JE55_RS13230 256246e9fe107c9d1507a0e328516a43 120 Pfam PF07681 DoxX 12 89 3.3E-17 T 22-04-2016 IPR032808 DoxX family JE55_RS09855 bcb1fe5146bfe5dac51b57302586f3cf 377 Pfam PF13609 Gram-negative porin 14 353 1.9E-44 T 22-04-2016 JE55_RS09855 bcb1fe5146bfe5dac51b57302586f3cf 377 Gene3D G3DSA:2.40.160.10 26 377 1.0E-80 T 22-04-2016 IPR023614 Porin domain JE55_RS09855 bcb1fe5146bfe5dac51b57302586f3cf 377 PRINTS PR00184 Neisseria sp. porin signature 230 256 7.4E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS09855 bcb1fe5146bfe5dac51b57302586f3cf 377 PRINTS PR00184 Neisseria sp. porin signature 60 85 7.4E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS09855 bcb1fe5146bfe5dac51b57302586f3cf 377 SUPERFAMILY SSF56935 26 377 2.52E-71 T 22-04-2016 JE55_RS09580 c093441d44f3a7869de4ca8d720152fc 239 Pfam PF16357 Putative PepSY_TM-like 44 228 1.4E-16 T 22-04-2016 IPR032307 Putative PepSY TM-like protein JE55_RS09580 c093441d44f3a7869de4ca8d720152fc 239 PANTHER PTHR40115 23 236 1.9E-16 T 22-04-2016 JE55_RS03490 362829812c63fd1bf52527c0d44adb46 385 PANTHER PTHR11228 24 326 5.5E-96 T 22-04-2016 JE55_RS03490 362829812c63fd1bf52527c0d44adb46 385 Gene3D G3DSA:3.20.20.70 78 267 1.4E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS03490 362829812c63fd1bf52527c0d44adb46 385 SUPERFAMILY SSF102114 60 284 3.14E-13 T 22-04-2016 JE55_RS03490 362829812c63fd1bf52527c0d44adb46 385 PANTHER PTHR11228:SF26 24 326 5.5E-96 T 22-04-2016 JE55_RS03490 362829812c63fd1bf52527c0d44adb46 385 Pfam PF04055 Radical SAM superfamily 82 259 1.1E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS03490 362829812c63fd1bf52527c0d44adb46 385 SMART SM00729 77 302 2.5E-8 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 JE55_RS23870 9b6026914e3e6998cf90425077e379a2 75 Pfam PF02867 Ribonucleotide reductase, barrel domain 16 75 6.2E-16 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 JE55_RS23870 9b6026914e3e6998cf90425077e379a2 75 SUPERFAMILY SSF51998 15 75 4.58E-19 T 22-04-2016 JE55_RS23870 9b6026914e3e6998cf90425077e379a2 75 Gene3D G3DSA:3.20.70.20 1 74 3.6E-12 T 22-04-2016 JE55_RS23870 9b6026914e3e6998cf90425077e379a2 75 PANTHER PTHR11573 1 75 1.2E-36 T 22-04-2016 JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 SMART SM00387 545 640 7.2E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 SUPERFAMILY SSF55874 538 638 5.27E-15 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 SUPERFAMILY SSF158472 200 249 2.62E-9 T 22-04-2016 JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 639 2.3E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 SUPERFAMILY SSF55781 255 423 2.09E-17 T 22-04-2016 IPR029016 GAF domain-like JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 Gene3D G3DSA:3.30.565.10 510 639 9.9E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 PANTHER PTHR24421:SF25 434 637 1.9E-46 T 22-04-2016 JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 PANTHER PTHR24421:SF25 51 312 1.9E-46 T 22-04-2016 JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 Gene3D G3DSA:3.30.450.40 261 435 3.4E-20 T 22-04-2016 IPR029016 GAF domain-like JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 Pfam PF00672 HAMP domain 180 248 1.2E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 PIRSF PIRSF003167 6 644 6.2E-198 T 22-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 40 140 4.5E-23 T 22-04-2016 IPR029095 NarX-like, N-terminal JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 Pfam PF07730 Histidine kinase 439 505 2.3E-12 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 Pfam PF13185 GAF domain 286 423 6.3E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 PANTHER PTHR24421 434 637 1.9E-46 T 22-04-2016 JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 PANTHER PTHR24421 51 312 1.9E-46 T 22-04-2016 JE55_RS02290 5b8f77c282386cfa1b6503b49cf6b19a 644 SMART SM00304 199 251 1.9E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS17380 4113e466c09bf5256f3f3e4f92e6b1f2 294 PANTHER PTHR12461 8 252 8.6E-56 T 22-04-2016 JE55_RS17380 4113e466c09bf5256f3f3e4f92e6b1f2 294 Pfam PF13621 Cupin-like domain 19 252 4.6E-42 T 22-04-2016 JE55_RS17380 4113e466c09bf5256f3f3e4f92e6b1f2 294 SUPERFAMILY SSF51197 8 280 7.83E-57 T 22-04-2016 JE55_RS17380 4113e466c09bf5256f3f3e4f92e6b1f2 294 Gene3D G3DSA:2.60.120.650 9 252 3.4E-47 T 22-04-2016 JE55_RS17380 4113e466c09bf5256f3f3e4f92e6b1f2 294 SMART SM00558 106 278 6.4E-5 T 22-04-2016 IPR003347 JmjC domain JE55_RS03725 6e2224a0466db0d4edd69feb15d191e2 436 Gene3D G3DSA:2.30.40.10 27 76 2.6E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS03725 6e2224a0466db0d4edd69feb15d191e2 436 PANTHER PTHR11271 18 430 6.5E-139 T 22-04-2016 JE55_RS03725 6e2224a0466db0d4edd69feb15d191e2 436 Gene3D G3DSA:3.20.20.140 77 370 1.7E-108 T 22-04-2016 JE55_RS03725 6e2224a0466db0d4edd69feb15d191e2 436 SUPERFAMILY SSF51338 22 83 1.02E-9 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS03725 6e2224a0466db0d4edd69feb15d191e2 436 SUPERFAMILY SSF51556 68 370 9.61E-93 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS03725 6e2224a0466db0d4edd69feb15d191e2 436 Pfam PF01979 Amidohydrolase family 66 427 3.6E-55 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 JE55_RS03725 6e2224a0466db0d4edd69feb15d191e2 436 SUPERFAMILY SSF51338 342 427 1.43E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS03725 6e2224a0466db0d4edd69feb15d191e2 436 PANTHER PTHR11271:SF6 18 430 6.5E-139 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 JE55_RS03725 6e2224a0466db0d4edd69feb15d191e2 436 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 25 424 3.2E-181 T 22-04-2016 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|UniPathway: UPA00603 JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 PIRSF PIRSF036354 3 709 4.6E-175 T 22-04-2016 IPR011399 Nitrous oxide reductase expression regulator NosR GO:0003677|GO:0016020|GO:0045893 JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 SMART SM00900 92 184 7.4E-14 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 PANTHER PTHR30224:SF4 79 356 6.5E-131 T 22-04-2016 JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 PANTHER PTHR30224:SF4 372 690 6.5E-131 T 22-04-2016 JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 636 647 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 Gene3D G3DSA:3.30.70.20 603 680 6.2E-6 T 22-04-2016 JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 SUPERFAMILY SSF54862 497 517 1.08E-8 T 22-04-2016 JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 SUPERFAMILY SSF54862 564 668 1.08E-8 T 22-04-2016 JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 Pfam PF04205 FMN-binding domain 92 180 1.5E-8 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 PANTHER PTHR30224 79 356 6.5E-131 T 22-04-2016 JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 PANTHER PTHR30224 372 690 6.5E-131 T 22-04-2016 JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 Pfam PF12801 4Fe-4S binding domain 484 526 6.7E-15 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS17950 78ba9c659259eac7ff981a9b31d06052 710 Pfam PF12801 4Fe-4S binding domain 587 633 5.9E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS25160 eed32e0b6c77c271fc96656b521008bc 711 SUPERFAMILY SSF52518 304 491 9.64E-18 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS25160 eed32e0b6c77c271fc96656b521008bc 711 Gene3D G3DSA:3.40.50.970 357 517 2.0E-10 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS25160 eed32e0b6c77c271fc96656b521008bc 711 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 598 702 1.6E-15 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JE55_RS25160 eed32e0b6c77c271fc96656b521008bc 711 SUPERFAMILY SSF53323 590 708 1.23E-18 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JE55_RS25160 eed32e0b6c77c271fc96656b521008bc 711 PANTHER PTHR18968:SF134 447 626 2.6E-193 T 22-04-2016 JE55_RS25160 eed32e0b6c77c271fc96656b521008bc 711 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 324 413 1.0E-6 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JE55_RS25160 eed32e0b6c77c271fc96656b521008bc 711 PANTHER PTHR18968:SF134 218 427 2.6E-193 T 22-04-2016 JE55_RS25160 eed32e0b6c77c271fc96656b521008bc 711 PANTHER PTHR18968 447 626 2.6E-193 T 22-04-2016 JE55_RS25160 eed32e0b6c77c271fc96656b521008bc 711 PANTHER PTHR18968 218 427 2.6E-193 T 22-04-2016 JE55_RS25160 eed32e0b6c77c271fc96656b521008bc 711 Gene3D G3DSA:3.40.920.10 592 698 7.1E-14 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JE55_RS17945 608b7930c93bcf5fa0d1d5eec787cb8c 164 PANTHER PTHR40942 32 164 4.1E-28 T 22-04-2016 JE55_RS17945 608b7930c93bcf5fa0d1d5eec787cb8c 164 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 84 159 1.1E-13 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS17945 608b7930c93bcf5fa0d1d5eec787cb8c 164 SUPERFAMILY SSF46626 84 160 4.58E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS17945 608b7930c93bcf5fa0d1d5eec787cb8c 164 PANTHER PTHR40942:SF1 32 164 4.1E-28 T 22-04-2016 JE55_RS17945 608b7930c93bcf5fa0d1d5eec787cb8c 164 Gene3D G3DSA:1.10.760.10 84 161 1.2E-28 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS17945 608b7930c93bcf5fa0d1d5eec787cb8c 164 PRINTS PR00607 Class IE cytochrome C signature 149 160 5.1E-10 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JE55_RS17945 608b7930c93bcf5fa0d1d5eec787cb8c 164 PRINTS PR00607 Class IE cytochrome C signature 134 146 5.1E-10 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JE55_RS17945 608b7930c93bcf5fa0d1d5eec787cb8c 164 PRINTS PR00607 Class IE cytochrome C signature 102 112 5.1E-10 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JE55_RS17945 608b7930c93bcf5fa0d1d5eec787cb8c 164 PRINTS PR00607 Class IE cytochrome C signature 91 102 5.1E-10 T 22-04-2016 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 JE55_RS17820 8d293d4f48532af5a4e5391b27669cf8 362 SUPERFAMILY SSF53474 314 329 4.61E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17820 8d293d4f48532af5a4e5391b27669cf8 362 SUPERFAMILY SSF53474 84 281 4.61E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17820 8d293d4f48532af5a4e5391b27669cf8 362 PANTHER PTHR10655:SF33 242 265 2.2E-12 T 22-04-2016 JE55_RS17820 8d293d4f48532af5a4e5391b27669cf8 362 PANTHER PTHR10655:SF33 92 223 2.2E-12 T 22-04-2016 JE55_RS17820 8d293d4f48532af5a4e5391b27669cf8 362 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 89 271 1.6E-34 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 JE55_RS17820 8d293d4f48532af5a4e5391b27669cf8 362 Pfam PF10503 Esterase PHB depolymerase 85 295 6.0E-68 T 22-04-2016 IPR010126 Esterase, PHB depolymerase GO:0005576 JE55_RS17820 8d293d4f48532af5a4e5391b27669cf8 362 Gene3D G3DSA:3.40.50.1820 306 354 6.9E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17820 8d293d4f48532af5a4e5391b27669cf8 362 Gene3D G3DSA:3.40.50.1820 85 273 6.9E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17820 8d293d4f48532af5a4e5391b27669cf8 362 PANTHER PTHR10655 242 265 2.2E-12 T 22-04-2016 JE55_RS17820 8d293d4f48532af5a4e5391b27669cf8 362 PANTHER PTHR10655 92 223 2.2E-12 T 22-04-2016 JE55_RS08565 b48da1e9314f98fd4c06d640a486dbfa 101 PANTHER PTHR12599 2 94 7.0E-53 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 JE55_RS08565 b48da1e9314f98fd4c06d640a486dbfa 101 SUPERFAMILY SSF55248 1 94 3.66E-35 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 JE55_RS08565 b48da1e9314f98fd4c06d640a486dbfa 101 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 24.051 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 JE55_RS08565 b48da1e9314f98fd4c06d640a486dbfa 101 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 94 4.6E-33 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 JE55_RS08565 b48da1e9314f98fd4c06d640a486dbfa 101 PANTHER PTHR12599:SF7 2 94 7.0E-53 T 22-04-2016 JE55_RS08565 b48da1e9314f98fd4c06d640a486dbfa 101 Gene3D G3DSA:3.30.1360.20 1 94 3.0E-38 T 22-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 JE55_RS01285 52e85c64915f6a5c2c35a77b3d5ada89 159 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 22-04-2016 IPR029759 Glutathione peroxidase active site JE55_RS01285 52e85c64915f6a5c2c35a77b3d5ada89 159 PIRSF PIRSF000303 1 159 6.0E-68 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 JE55_RS01285 52e85c64915f6a5c2c35a77b3d5ada89 159 Pfam PF00255 Glutathione peroxidase 4 110 1.0E-43 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 JE55_RS01285 52e85c64915f6a5c2c35a77b3d5ada89 159 PANTHER PTHR11592 4 159 9.2E-93 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 JE55_RS01285 52e85c64915f6a5c2c35a77b3d5ada89 159 PRINTS PR01011 Glutathione peroxidase family signature 22 39 5.5E-22 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 JE55_RS01285 52e85c64915f6a5c2c35a77b3d5ada89 159 PRINTS PR01011 Glutathione peroxidase family signature 57 73 5.5E-22 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 JE55_RS01285 52e85c64915f6a5c2c35a77b3d5ada89 159 PRINTS PR01011 Glutathione peroxidase family signature 123 132 5.5E-22 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 JE55_RS01285 52e85c64915f6a5c2c35a77b3d5ada89 159 Gene3D G3DSA:3.40.30.10 3 159 5.4E-73 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS01285 52e85c64915f6a5c2c35a77b3d5ada89 159 SUPERFAMILY SSF52833 3 159 1.83E-63 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS01285 52e85c64915f6a5c2c35a77b3d5ada89 159 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site JE55_RS00625 c6122d16cbe3c146655273b17713cbba 521 PANTHER PTHR32057 33 521 2.0E-200 T 22-04-2016 JE55_RS00625 c6122d16cbe3c146655273b17713cbba 521 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 21 507 44.108 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 JE55_RS00625 c6122d16cbe3c146655273b17713cbba 521 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 27 490 4.3E-139 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 JE55_RS13880 d988af673ed9b0c427682d2f0126110f 128 SUPERFAMILY SSF141488 36 118 1.83E-18 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor JE55_RS13880 d988af673ed9b0c427682d2f0126110f 128 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 41 105 1.4E-16 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor JE55_RS00780 2afe42b9e7d4a124a5a4accf5f66b3e3 369 PRINTS PR01270 Histone deacetylase superfamily signature 139 162 1.3E-13 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS00780 2afe42b9e7d4a124a5a4accf5f66b3e3 369 PRINTS PR01270 Histone deacetylase superfamily signature 173 188 1.3E-13 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS00780 2afe42b9e7d4a124a5a4accf5f66b3e3 369 PRINTS PR01270 Histone deacetylase superfamily signature 258 268 1.3E-13 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS00780 2afe42b9e7d4a124a5a4accf5f66b3e3 369 Pfam PF00850 Histone deacetylase domain 50 327 2.7E-73 T 22-04-2016 IPR023801 Histone deacetylase domain JE55_RS00780 2afe42b9e7d4a124a5a4accf5f66b3e3 369 Gene3D G3DSA:3.40.800.20 4 338 8.9E-93 T 22-04-2016 IPR023801 Histone deacetylase domain JE55_RS00780 2afe42b9e7d4a124a5a4accf5f66b3e3 369 PANTHER PTHR10625 40 341 1.4E-90 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS00780 2afe42b9e7d4a124a5a4accf5f66b3e3 369 PANTHER PTHR10625:SF104 40 341 1.4E-90 T 22-04-2016 JE55_RS00780 2afe42b9e7d4a124a5a4accf5f66b3e3 369 SUPERFAMILY SSF52768 3 343 3.07E-96 T 22-04-2016 JE55_RS09475 54351e7639d7388292a687648cd70488 347 Pfam PF00248 Aldo/keto reductase family 28 329 1.5E-67 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain JE55_RS09475 54351e7639d7388292a687648cd70488 347 PANTHER PTHR11732:SF191 13 329 4.3E-173 T 22-04-2016 JE55_RS09475 54351e7639d7388292a687648cd70488 347 SUPERFAMILY SSF51430 13 329 8.12E-90 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain JE55_RS09475 54351e7639d7388292a687648cd70488 347 Gene3D G3DSA:3.20.20.100 21 331 2.7E-86 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain JE55_RS09475 54351e7639d7388292a687648cd70488 347 PANTHER PTHR11732 13 329 4.3E-173 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta JE55_RS05495 1a1a01983461a153bc41312dcddab0a6 484 SUPERFAMILY SSF52467 312 483 2.22E-72 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS05495 1a1a01983461a153bc41312dcddab0a6 484 Gene3D G3DSA:3.40.50.1220 308 483 8.0E-85 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS05495 1a1a01983461a153bc41312dcddab0a6 484 PANTHER PTHR10160:SF24 3 483 1.1E-219 T 22-04-2016 JE55_RS05495 1a1a01983461a153bc41312dcddab0a6 484 PIRSF PIRSF000204 1 484 1.6E-206 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 JE55_RS05495 1a1a01983461a153bc41312dcddab0a6 484 PANTHER PTHR10160 3 483 1.1E-219 T 22-04-2016 JE55_RS05495 1a1a01983461a153bc41312dcddab0a6 484 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 481 1.7E-185 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 JE55_RS11555 fd8e53b2bf8f6afc3f6417fb40265cfd 137 PANTHER PTHR35303:SF1 9 123 5.3E-42 T 22-04-2016 JE55_RS11555 fd8e53b2bf8f6afc3f6417fb40265cfd 137 Pfam PF06155 Protein of unknown function (DUF971) 16 98 3.4E-25 T 22-04-2016 IPR010376 Domain of unknown function DUF971 Reactome: REACT_13|UniPathway: UPA00118 JE55_RS11555 fd8e53b2bf8f6afc3f6417fb40265cfd 137 PANTHER PTHR35303 9 123 5.3E-42 T 22-04-2016 JE55_RS16415 8f1df91d7e326cf4cbe10f3f85311def 65 Pfam PF04964 Flp/Fap pilin component 17 62 5.2E-17 T 22-04-2016 IPR007047 Flp/Fap pilin component JE55_RS11585 94396394153b16ea76110d5762009a7d 113 SMART SM00834 1 42 1.8E-18 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JE55_RS11585 94396394153b16ea76110d5762009a7d 113 PANTHER PTHR34404 2 66 1.2E-19 T 22-04-2016 JE55_RS11585 94396394153b16ea76110d5762009a7d 113 Pfam PF09723 Zinc ribbon domain 1 41 5.8E-16 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JE55_RS11585 94396394153b16ea76110d5762009a7d 113 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 1.7E-22 T 22-04-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain JE55_RS11585 94396394153b16ea76110d5762009a7d 113 PANTHER PTHR34404:SF2 2 66 1.2E-19 T 22-04-2016 JE55_RS17305 7e766a5dd78a58730380838e72cc067e 406 Gene3D G3DSA:1.10.3720.10 194 394 3.5E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17305 7e766a5dd78a58730380838e72cc067e 406 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 217 393 1.5E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17305 7e766a5dd78a58730380838e72cc067e 406 PANTHER PTHR30177:SF8 111 395 2.5E-82 T 22-04-2016 JE55_RS17305 7e766a5dd78a58730380838e72cc067e 406 SUPERFAMILY SSF161098 197 389 4.06E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17305 7e766a5dd78a58730380838e72cc067e 406 PANTHER PTHR30177 111 395 2.5E-82 T 22-04-2016 JE55_RS11040 3a9f41f96f1e7bef2f4bdf91c1d4d2b2 273 Gene3D G3DSA:3.40.630.30 118 257 1.1E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS11040 3a9f41f96f1e7bef2f4bdf91c1d4d2b2 273 Pfam PF00583 Acetyltransferase (GNAT) family 176 249 4.1E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS11040 3a9f41f96f1e7bef2f4bdf91c1d4d2b2 273 SUPERFAMILY SSF55729 49 257 1.05E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS09720 b683dd0cae079f5924ffb7363450a763 651 Gene3D G3DSA:1.25.20.10 38 396 9.0E-97 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 JE55_RS09720 b683dd0cae079f5924ffb7363450a763 651 PANTHER PTHR21666 472 636 4.7E-41 T 22-04-2016 JE55_RS09720 b683dd0cae079f5924ffb7363450a763 651 SUPERFAMILY SSF53955 486 649 6.57E-48 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS09720 b683dd0cae079f5924ffb7363450a763 651 Gene3D G3DSA:1.10.530.10 481 644 1.5E-48 T 22-04-2016 JE55_RS09720 b683dd0cae079f5924ffb7363450a763 651 SUPERFAMILY SSF48435 38 484 5.36E-113 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 JE55_RS09720 b683dd0cae079f5924ffb7363450a763 651 Pfam PF01464 Transglycosylase SLT domain 492 596 2.7E-21 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 JE55_RS15950 17c05531e2564ed1d8f66c9fa2aa67b1 76 PANTHER PTHR33279 1 76 6.1E-21 T 22-04-2016 JE55_RS15950 17c05531e2564ed1d8f66c9fa2aa67b1 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 22-04-2016 IPR001455 TusA-like domain JE55_RS15950 17c05531e2564ed1d8f66c9fa2aa67b1 76 SUPERFAMILY SSF64307 4 75 3.53E-24 T 22-04-2016 IPR001455 TusA-like domain JE55_RS15950 17c05531e2564ed1d8f66c9fa2aa67b1 76 Gene3D G3DSA:3.30.110.40 3 75 5.6E-29 T 22-04-2016 IPR001455 TusA-like domain JE55_RS15950 17c05531e2564ed1d8f66c9fa2aa67b1 76 Pfam PF01206 Sulfurtransferase TusA 5 75 3.1E-23 T 22-04-2016 IPR001455 TusA-like domain JE55_RS02510 f1e857106c644d6e9c1f7c76b9c5488e 407 Pfam PF05940 NnrS protein 21 394 5.1E-96 T 22-04-2016 IPR010266 NnrS JE55_RS29210 15ad35cb8c95ee4c7c312cfd79d937c6 227 Pfam PF13555 P-loop containing region of AAA domain 3 38 1.8E-9 T 22-04-2016 JE55_RS29210 15ad35cb8c95ee4c7c312cfd79d937c6 227 SUPERFAMILY SSF52540 2 26 6.82E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS29210 15ad35cb8c95ee4c7c312cfd79d937c6 227 Gene3D G3DSA:3.40.1140.10 1 216 1.3E-14 T 22-04-2016 JE55_RS29210 15ad35cb8c95ee4c7c312cfd79d937c6 227 SUPERFAMILY SSF52540 1 176 2.67E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01980 6bc1affd9026df9eb87a5b3c82b3bf79 433 SUPERFAMILY SSF56349 102 407 2.09E-36 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS01980 6bc1affd9026df9eb87a5b3c82b3bf79 433 PANTHER PTHR30629 1 418 9.1E-36 T 22-04-2016 JE55_RS01980 6bc1affd9026df9eb87a5b3c82b3bf79 433 Gene3D G3DSA:1.10.443.10 219 405 3.5E-22 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS01980 6bc1affd9026df9eb87a5b3c82b3bf79 433 Pfam PF13356 Domain of unknown function (DUF4102) 18 87 8.7E-10 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 JE55_RS01980 6bc1affd9026df9eb87a5b3c82b3bf79 433 Pfam PF00589 Phage integrase family 220 398 4.7E-9 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS01980 6bc1affd9026df9eb87a5b3c82b3bf79 433 Gene3D G3DSA:1.10.150.130 103 187 2.7E-5 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal JE55_RS03645 1eb5c46a7b50a53500e89f9665cbca77 214 Gene3D G3DSA:3.40.50.150 13 120 3.7E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS03645 1eb5c46a7b50a53500e89f9665cbca77 214 Pfam PF00398 Ribosomal RNA adenine dimethylase 35 95 8.8E-7 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JE55_RS03645 1eb5c46a7b50a53500e89f9665cbca77 214 PANTHER PTHR11727:SF14 31 138 1.3E-14 T 22-04-2016 JE55_RS03645 1eb5c46a7b50a53500e89f9665cbca77 214 SUPERFAMILY SSF53335 10 157 8.67E-21 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS03645 1eb5c46a7b50a53500e89f9665cbca77 214 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 45 75 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 JE55_RS03645 1eb5c46a7b50a53500e89f9665cbca77 214 PANTHER PTHR11727 31 138 1.3E-14 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JE55_RS02490 839f6588b36be3005361e281f5169ba4 388 PANTHER PTHR38674:SF1 1 367 5.1E-112 T 22-04-2016 JE55_RS02490 839f6588b36be3005361e281f5169ba4 388 PANTHER PTHR38674 1 367 5.1E-112 T 22-04-2016 JE55_RS02490 839f6588b36be3005361e281f5169ba4 388 Pfam PF00487 Fatty acid desaturase 116 336 8.1E-29 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 JE55_RS04040 1e10366af6c44c644e137c5d16e01088 415 PANTHER PTHR30061 1 413 2.9E-89 T 22-04-2016 JE55_RS04040 1e10366af6c44c644e137c5d16e01088 415 Gene3D G3DSA:3.40.190.10 143 341 2.3E-28 T 22-04-2016 JE55_RS04040 1e10366af6c44c644e137c5d16e01088 415 Pfam PF01547 Bacterial extracellular solute-binding protein 66 294 3.4E-21 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 JE55_RS04040 1e10366af6c44c644e137c5d16e01088 415 PANTHER PTHR30061:SF22 1 413 2.9E-89 T 22-04-2016 JE55_RS04040 1e10366af6c44c644e137c5d16e01088 415 SUPERFAMILY SSF53850 25 412 2.48E-54 T 22-04-2016 JE55_RS06845 805f19bb66c14599df30e1a43e590ff5 991 Pfam PF13604 AAA domain 485 669 6.1E-43 T 22-04-2016 JE55_RS06845 805f19bb66c14599df30e1a43e590ff5 991 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 15 290 8.5E-91 T 22-04-2016 IPR014059 Conjugative relaxase, N-terminal JE55_RS06845 805f19bb66c14599df30e1a43e590ff5 991 Gene3D G3DSA:3.40.50.300 479 659 1.5E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06845 805f19bb66c14599df30e1a43e590ff5 991 Pfam PF08751 TrwC relaxase 15 286 1.2E-82 T 22-04-2016 IPR014862 TrwC relaxase JE55_RS06845 805f19bb66c14599df30e1a43e590ff5 991 Gene3D G3DSA:3.40.50.300 671 723 6.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06845 805f19bb66c14599df30e1a43e590ff5 991 Gene3D G3DSA:3.40.50.300 864 920 6.4E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06845 805f19bb66c14599df30e1a43e590ff5 991 SUPERFAMILY SSF52540 482 636 7.72E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06845 805f19bb66c14599df30e1a43e590ff5 991 SUPERFAMILY SSF55464 3 291 3.48E-93 T 22-04-2016 JE55_RS06845 805f19bb66c14599df30e1a43e590ff5 991 SUPERFAMILY SSF52540 594 658 5.9E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06845 805f19bb66c14599df30e1a43e590ff5 991 SUPERFAMILY SSF52540 804 921 5.9E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06845 805f19bb66c14599df30e1a43e590ff5 991 SUPERFAMILY SSF52540 693 725 5.9E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08475 6cab8c0721c462115fc135654642dd28 232 Pfam PF02527 rRNA small subunit methyltransferase G 38 223 1.3E-48 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JE55_RS08475 6cab8c0721c462115fc135654642dd28 232 SUPERFAMILY SSF53335 20 226 2.66E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS08475 6cab8c0721c462115fc135654642dd28 232 Gene3D G3DSA:3.40.50.150 15 227 2.2E-64 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS08475 6cab8c0721c462115fc135654642dd28 232 PANTHER PTHR31760 1 230 2.8E-63 T 22-04-2016 JE55_RS08475 6cab8c0721c462115fc135654642dd28 232 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 41 226 1.8E-46 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JE55_RS08475 6cab8c0721c462115fc135654642dd28 232 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 29 225 26.424 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JE55_RS08475 6cab8c0721c462115fc135654642dd28 232 PANTHER PTHR31760:SF0 1 230 2.8E-63 T 22-04-2016 JE55_RS08475 6cab8c0721c462115fc135654642dd28 232 PIRSF PIRSF003078 14 231 1.1E-50 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 JE55_RS17640 af218eb9b8c7a18ec2307ef83b4afea8 363 SMART SM00382 30 213 1.2E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS17640 af218eb9b8c7a18ec2307ef83b4afea8 363 Pfam PF08402 TOBE domain 281 360 6.5E-18 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 JE55_RS17640 af218eb9b8c7a18ec2307ef83b4afea8 363 SUPERFAMILY SSF52540 6 246 4.06E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17640 af218eb9b8c7a18ec2307ef83b4afea8 363 PANTHER PTHR24220:SF402 7 248 4.0E-125 T 22-04-2016 JE55_RS17640 af218eb9b8c7a18ec2307ef83b4afea8 363 Pfam PF00005 ABC transporter 22 163 4.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS17640 af218eb9b8c7a18ec2307ef83b4afea8 363 PANTHER PTHR24220 7 248 4.0E-125 T 22-04-2016 JE55_RS17640 af218eb9b8c7a18ec2307ef83b4afea8 363 Gene3D G3DSA:3.40.50.300 5 236 9.4E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17640 af218eb9b8c7a18ec2307ef83b4afea8 363 SUPERFAMILY SSF50331 239 359 7.37E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS17640 af218eb9b8c7a18ec2307ef83b4afea8 363 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS06780 e33346ea8772fc0c66d18ce726a941f8 172 PIRSF PIRSF028301 2 172 8.1E-67 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 JE55_RS06780 e33346ea8772fc0c66d18ce726a941f8 172 PANTHER PTHR35850:SF1 2 170 1.6E-65 T 22-04-2016 JE55_RS06780 e33346ea8772fc0c66d18ce726a941f8 172 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 163 5.0E-60 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 JE55_RS06780 e33346ea8772fc0c66d18ce726a941f8 172 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 164 5.0E-59 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 JE55_RS06780 e33346ea8772fc0c66d18ce726a941f8 172 PANTHER PTHR35850 2 170 1.6E-65 T 22-04-2016 JE55_RS13220 5930ff0127386303838fd12472efaf3e 185 Gene3D G3DSA:3.40.50.300 7 178 8.7E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13220 5930ff0127386303838fd12472efaf3e 185 PIRSF PIRSF006135 5 180 3.5E-55 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 JE55_RS13220 5930ff0127386303838fd12472efaf3e 185 PANTHER PTHR34848 6 180 1.1E-69 T 22-04-2016 JE55_RS13220 5930ff0127386303838fd12472efaf3e 185 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 7 176 2.1E-60 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 JE55_RS13220 5930ff0127386303838fd12472efaf3e 185 SUPERFAMILY SSF52540 6 178 9.55E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS21935 207121c042d4ba6fd6d0f14bf4b94612 240 Pfam PF00083 Sugar (and other) transporter 28 237 7.3E-25 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JE55_RS21935 207121c042d4ba6fd6d0f14bf4b94612 240 PANTHER PTHR23508 24 239 3.1E-122 T 22-04-2016 JE55_RS21935 207121c042d4ba6fd6d0f14bf4b94612 240 Gene3D G3DSA:1.20.1250.20 24 228 2.3E-23 T 22-04-2016 JE55_RS21935 207121c042d4ba6fd6d0f14bf4b94612 240 PANTHER PTHR23508:SF16 24 239 3.1E-122 T 22-04-2016 JE55_RS21935 207121c042d4ba6fd6d0f14bf4b94612 240 SUPERFAMILY SSF103473 13 229 2.09E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS04050 9c0e4c2482fe94d6cdbc064ee2479d19 226 SUPERFAMILY SSF100950 2 215 3.72E-46 T 22-04-2016 JE55_RS04050 9c0e4c2482fe94d6cdbc064ee2479d19 226 Gene3D G3DSA:3.40.50.1360 2 213 9.9E-47 T 22-04-2016 JE55_RS04050 9c0e4c2482fe94d6cdbc064ee2479d19 226 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 209 7.4E-50 T 22-04-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 JE55_RS04050 9c0e4c2482fe94d6cdbc064ee2479d19 226 PANTHER PTHR11054 2 211 4.4E-30 T 22-04-2016 JE55_RS04050 9c0e4c2482fe94d6cdbc064ee2479d19 226 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 204 5.7E-45 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 Gene3D G3DSA:3.40.1390.10 15 91 9.9E-24 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 Pfam PF01225 Mur ligase family, catalytic domain 28 98 1.0E-10 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 455 9.6E-125 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 SUPERFAMILY SSF53623 103 316 2.88E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 SUPERFAMILY SSF63418 1 98 8.24E-24 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 PANTHER PTHR23135 13 457 5.2E-137 T 22-04-2016 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 PANTHER PTHR23135:SF3 13 457 5.2E-137 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 400 3.3E-14 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 Gene3D G3DSA:3.40.1190.10 92 315 1.2E-61 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 456 33.141 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 Pfam PF08245 Mur ligase middle domain 108 298 2.4E-38 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 Gene3D G3DSA:3.90.190.20 317 458 1.6E-43 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS06320 8faa7a0ef581f4f29df0ba4997d0a603 468 SUPERFAMILY SSF53244 318 455 2.98E-35 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS11215 ea2984b3fe27d2acda1ac3c5573c6e88 285 Pfam PF00293 NUDIX domain 134 238 1.8E-6 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 JE55_RS11215 ea2984b3fe27d2acda1ac3c5573c6e88 285 Pfam PF15916 Domain of unknown function (DUF4743) 4 114 1.1E-31 T 22-04-2016 IPR031804 Domain of unknown function DUF4743 JE55_RS11215 ea2984b3fe27d2acda1ac3c5573c6e88 285 PANTHER PTHR13622:SF8 74 282 1.5E-41 T 22-04-2016 JE55_RS11215 ea2984b3fe27d2acda1ac3c5573c6e88 285 SUPERFAMILY SSF55811 87 262 6.36E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS11215 ea2984b3fe27d2acda1ac3c5573c6e88 285 PANTHER PTHR13622 74 282 1.5E-41 T 22-04-2016 JE55_RS11215 ea2984b3fe27d2acda1ac3c5573c6e88 285 Gene3D G3DSA:3.90.79.10 83 263 2.9E-46 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS06665 22ced698715b6e9ce2273a5e39dee07f 298 Gene3D G3DSA:3.40.50.150 58 170 4.1E-7 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS06665 22ced698715b6e9ce2273a5e39dee07f 298 SUPERFAMILY SSF53335 40 197 5.7E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS06665 22ced698715b6e9ce2273a5e39dee07f 298 PANTHER PTHR13369 25 251 2.9E-23 T 22-04-2016 JE55_RS06665 22ced698715b6e9ce2273a5e39dee07f 298 Pfam PF13679 Methyltransferase domain 35 176 1.7E-43 T 22-04-2016 IPR025714 Methyltransferase domain JE55_RS11205 8357c2a28ff6fabd948dd0a25a631c1a 186 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 15 181 1.9E-63 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 JE55_RS11205 8357c2a28ff6fabd948dd0a25a631c1a 186 Pfam PF00156 Phosphoribosyl transferase domain 56 162 2.8E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 JE55_RS11205 8357c2a28ff6fabd948dd0a25a631c1a 186 Gene3D G3DSA:3.40.50.2020 13 183 1.7E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS11205 8357c2a28ff6fabd948dd0a25a631c1a 186 PANTHER PTHR32315 1 186 1.5E-75 T 22-04-2016 JE55_RS11205 8357c2a28ff6fabd948dd0a25a631c1a 186 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 14 183 35.463 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 JE55_RS11205 8357c2a28ff6fabd948dd0a25a631c1a 186 SUPERFAMILY SSF53271 17 183 2.75E-50 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS12080 5e679d5730128143620c2db843472d4d 166 Gene3D G3DSA:3.90.420.10 26 140 6.5E-13 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 JE55_RS12080 5e679d5730128143620c2db843472d4d 166 Pfam PF00174 Oxidoreductase molybdopterin binding domain 64 140 5.0E-11 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 JE55_RS12080 5e679d5730128143620c2db843472d4d 166 SUPERFAMILY SSF56524 25 142 8.24E-22 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 JE55_RS01590 c966c93dd8ba1a9c2e50fbd114e06dfc 265 SUPERFAMILY SSF52540 4 103 9.81E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01590 c966c93dd8ba1a9c2e50fbd114e06dfc 265 Pfam PF03567 Sulfotransferase family 2 231 2.8E-10 T 22-04-2016 IPR005331 Sulfotransferase GO:0008146|GO:0016021 JE55_RS01590 c966c93dd8ba1a9c2e50fbd114e06dfc 265 PANTHER PTHR32301 8 237 3.9E-20 T 22-04-2016 JE55_RS11560 905601dad2e210bf71b893f32c356f6e 243 PANTHER PTHR10108 4 243 2.5E-137 T 22-04-2016 JE55_RS11560 905601dad2e210bf71b893f32c356f6e 243 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 20 242 2.6E-74 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 JE55_RS11560 905601dad2e210bf71b893f32c356f6e 243 Gene3D G3DSA:3.40.50.150 18 235 1.7E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS11560 905601dad2e210bf71b893f32c356f6e 243 SUPERFAMILY SSF53335 1 233 3.82E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS11560 905601dad2e210bf71b893f32c356f6e 243 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 31 46 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 JE55_RS11560 905601dad2e210bf71b893f32c356f6e 243 Pfam PF01209 ubiE/COQ5 methyltransferase family 15 242 3.1E-87 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 JE55_RS11560 905601dad2e210bf71b893f32c356f6e 243 PANTHER PTHR10108:SF864 4 243 2.5E-137 T 22-04-2016 JE55_RS11560 905601dad2e210bf71b893f32c356f6e 243 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 11 242 35.734 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 JE55_RS03560 618374119ea24cb9d93a05bac55b5fa4 105 Gene3D G3DSA:1.10.150.280 18 81 9.0E-18 T 22-04-2016 JE55_RS03560 618374119ea24cb9d93a05bac55b5fa4 105 Pfam PF12836 Helix-hairpin-helix motif 21 78 1.0E-14 T 22-04-2016 JE55_RS03560 618374119ea24cb9d93a05bac55b5fa4 105 SUPERFAMILY SSF47781 20 86 4.0E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 JE55_RS03560 618374119ea24cb9d93a05bac55b5fa4 105 PANTHER PTHR21180 19 78 6.8E-16 T 22-04-2016 JE55_RS03560 618374119ea24cb9d93a05bac55b5fa4 105 SMART SM00278 61 80 150.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JE55_RS03560 618374119ea24cb9d93a05bac55b5fa4 105 SMART SM00278 30 49 0.71 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 JE55_RS01685 2335c751a70abd45f59b8efe93aa589a 240 SUPERFAMILY SSF48452 53 167 4.09E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS01685 2335c751a70abd45f59b8efe93aa589a 240 Pfam PF13432 Tetratricopeptide repeat 52 106 2.6E-8 T 22-04-2016 JE55_RS01685 2335c751a70abd45f59b8efe93aa589a 240 Pfam PF13432 Tetratricopeptide repeat 113 155 3.2E-4 T 22-04-2016 JE55_RS01685 2335c751a70abd45f59b8efe93aa589a 240 Gene3D G3DSA:1.25.40.10 52 165 2.9E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS01685 2335c751a70abd45f59b8efe93aa589a 240 PANTHER PTHR23083 55 155 3.0E-14 T 22-04-2016 JE55_RS01685 2335c751a70abd45f59b8efe93aa589a 240 SMART SM00028 74 107 42.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS01685 2335c751a70abd45f59b8efe93aa589a 240 SMART SM00028 108 141 0.0094 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 JE55_RS15150 b02a8cc2fce2546f982dd50b0bc5df43 110 SUPERFAMILY SSF103481 11 108 2.48E-5 T 22-04-2016 JE55_RS15150 b02a8cc2fce2546f982dd50b0bc5df43 110 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 1 109 22.835 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 JE55_RS15150 b02a8cc2fce2546f982dd50b0bc5df43 110 PANTHER PTHR36116:SF1 2 110 8.2E-42 T 22-04-2016 JE55_RS15150 b02a8cc2fce2546f982dd50b0bc5df43 110 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 9 110 1.6E-35 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 JE55_RS15150 b02a8cc2fce2546f982dd50b0bc5df43 110 PANTHER PTHR36116 2 110 8.2E-42 T 22-04-2016 JE55_RS14625 7247cbd9a8a7d9fea4bc30c4fdfee17e 341 Pfam PF09084 NMT1/THI5 like 83 261 2.1E-11 T 22-04-2016 IPR015168 SsuA/THI5-like JE55_RS14625 7247cbd9a8a7d9fea4bc30c4fdfee17e 341 PANTHER PTHR30024:SF11 17 339 3.4E-115 T 22-04-2016 JE55_RS14625 7247cbd9a8a7d9fea4bc30c4fdfee17e 341 Gene3D G3DSA:3.40.190.10 141 262 1.9E-26 T 22-04-2016 JE55_RS14625 7247cbd9a8a7d9fea4bc30c4fdfee17e 341 SUPERFAMILY SSF53850 56 282 8.39E-47 T 22-04-2016 JE55_RS14625 7247cbd9a8a7d9fea4bc30c4fdfee17e 341 PANTHER PTHR30024 17 339 3.4E-115 T 22-04-2016 JE55_RS14625 7247cbd9a8a7d9fea4bc30c4fdfee17e 341 SMART SM00062 57 273 1.7E-17 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JE55_RS14625 7247cbd9a8a7d9fea4bc30c4fdfee17e 341 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 58 336 1.3E-67 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 JE55_RS07215 79598e35cd97335cf0035d4a599afa3b 396 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 157 394 1.2E-73 T 22-04-2016 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 JE55_RS07215 79598e35cd97335cf0035d4a599afa3b 396 PANTHER PTHR30071 121 396 1.1E-67 T 22-04-2016 JE55_RS07215 79598e35cd97335cf0035d4a599afa3b 396 PANTHER PTHR30071:SF5 121 396 1.1E-67 T 22-04-2016 JE55_RS07215 79598e35cd97335cf0035d4a599afa3b 396 Pfam PF01578 Cytochrome C assembly protein 187 391 8.3E-49 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 JE55_RS02570 4faabdf92242a3c56c97aebba183ad0c 640 PANTHER PTHR32089 283 640 1.0E-118 T 22-04-2016 JE55_RS02570 4faabdf92242a3c56c97aebba183ad0c 640 PANTHER PTHR32089:SF63 283 640 1.0E-118 T 22-04-2016 JE55_RS02570 4faabdf92242a3c56c97aebba183ad0c 640 Gene3D G3DSA:1.10.287.950 406 610 5.3E-55 T 22-04-2016 JE55_RS02570 4faabdf92242a3c56c97aebba183ad0c 640 SMART SM00304 250 305 8.9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS02570 4faabdf92242a3c56c97aebba183ad0c 640 SMART SM00304 338 390 2.0E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS02570 4faabdf92242a3c56c97aebba183ad0c 640 SUPERFAMILY SSF58104 358 638 8.76E-67 T 22-04-2016 JE55_RS02570 4faabdf92242a3c56c97aebba183ad0c 640 SMART SM00283 391 638 1.2E-79 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS02570 4faabdf92242a3c56c97aebba183ad0c 640 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 450 637 4.3E-56 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS15535 551c7ad33f966c0028b032fee5e6bf4c 231 Gene3D G3DSA:3.40.50.2300 4 121 1.3E-32 T 22-04-2016 JE55_RS15535 551c7ad33f966c0028b032fee5e6bf4c 231 SUPERFAMILY SSF52172 4 183 1.42E-33 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS15535 551c7ad33f966c0028b032fee5e6bf4c 231 PANTHER PTHR26402:SF578 2 227 2.1E-57 T 22-04-2016 JE55_RS15535 551c7ad33f966c0028b032fee5e6bf4c 231 Gene3D G3DSA:1.10.10.10 128 226 5.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15535 551c7ad33f966c0028b032fee5e6bf4c 231 SMART SM00862 148 225 1.2E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS15535 551c7ad33f966c0028b032fee5e6bf4c 231 Pfam PF00072 Response regulator receiver domain 4 113 1.7E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS15535 551c7ad33f966c0028b032fee5e6bf4c 231 PANTHER PTHR26402 2 227 2.1E-57 T 22-04-2016 JE55_RS15535 551c7ad33f966c0028b032fee5e6bf4c 231 SMART SM00448 2 113 3.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS15535 551c7ad33f966c0028b032fee5e6bf4c 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 225 6.4E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS15055 999c30c9d772eb4c9c5bec50996b8277 621 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 17 620 51.2 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 JE55_RS15055 999c30c9d772eb4c9c5bec50996b8277 621 PANTHER PTHR11561 26 619 0.0 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 JE55_RS15055 999c30c9d772eb4c9c5bec50996b8277 621 Gene3D G3DSA:3.90.228.20 252 323 1.4E-30 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 JE55_RS15055 999c30c9d772eb4c9c5bec50996b8277 621 Gene3D G3DSA:3.90.228.20 346 619 1.2E-94 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 JE55_RS15055 999c30c9d772eb4c9c5bec50996b8277 621 PIRSF PIRSF001348 5 621 7.5E-279 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 JE55_RS15055 999c30c9d772eb4c9c5bec50996b8277 621 Pfam PF00821 Phosphoenolpyruvate carboxykinase 28 619 6.6E-280 T 22-04-2016 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 JE55_RS15055 999c30c9d772eb4c9c5bec50996b8277 621 Gene3D G3DSA:3.40.449.10 20 251 2.4E-101 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 JE55_RS15055 999c30c9d772eb4c9c5bec50996b8277 621 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 276 284 - T 22-04-2016 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00138 JE55_RS15055 999c30c9d772eb4c9c5bec50996b8277 621 SUPERFAMILY SSF53795 252 619 2.52E-155 T 22-04-2016 JE55_RS15055 999c30c9d772eb4c9c5bec50996b8277 621 SUPERFAMILY SSF68923 18 251 1.2E-101 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 JE55_RS11645 909649678349beee822318f0046160f9 132 PANTHER PTHR11049 1 132 6.6E-44 T 22-04-2016 JE55_RS11645 909649678349beee822318f0046160f9 132 Pfam PF03061 Thioesterase superfamily 27 101 2.3E-16 T 22-04-2016 IPR006683 Thioesterase domain JE55_RS11645 909649678349beee822318f0046160f9 132 SUPERFAMILY SSF54637 15 131 1.71E-34 T 22-04-2016 IPR029069 HotDog domain JE55_RS11645 909649678349beee822318f0046160f9 132 PANTHER PTHR11049:SF5 1 132 6.6E-44 T 22-04-2016 JE55_RS11645 909649678349beee822318f0046160f9 132 Gene3D G3DSA:3.10.129.10 6 131 8.9E-37 T 22-04-2016 IPR029069 HotDog domain JE55_RS01515 d398164774616adadb6ed2ba9efe0462 74 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 70 7.7E-30 T 22-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system JE55_RS06420 05a82bac408a944328206345a9789d5a 432 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 11 430 1.1E-214 T 22-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 JE55_RS06420 05a82bac408a944328206345a9789d5a 432 Pfam PF00501 AMP-binding enzyme 85 289 4.9E-15 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 JE55_RS06420 05a82bac408a944328206345a9789d5a 432 PIRSF PIRSF006444 1 432 1.1E-207 T 22-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 JE55_RS06420 05a82bac408a944328206345a9789d5a 432 PANTHER PTHR24095:SF175 59 431 7.8E-186 T 22-04-2016 JE55_RS06420 05a82bac408a944328206345a9789d5a 432 Pfam PF14535 AMP-binding enzyme C-terminal domain 335 430 2.9E-21 T 22-04-2016 IPR028154 AMP-dependent ligase, C-terminal JE55_RS06420 05a82bac408a944328206345a9789d5a 432 PANTHER PTHR24095 59 431 7.8E-186 T 22-04-2016 JE55_RS06420 05a82bac408a944328206345a9789d5a 432 Gene3D G3DSA:3.30.300.30 325 431 3.1E-32 T 22-04-2016 JE55_RS06420 05a82bac408a944328206345a9789d5a 432 Gene3D G3DSA:3.40.50.980 90 244 7.4E-13 T 22-04-2016 JE55_RS06420 05a82bac408a944328206345a9789d5a 432 SUPERFAMILY SSF56801 16 393 4.06E-64 T 22-04-2016 JE55_RS06475 2a68eee8e2583f4c2555d8115557dd3d 262 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 86 95 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 JE55_RS06475 2a68eee8e2583f4c2555d8115557dd3d 262 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 37 246 2.4E-75 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 JE55_RS06475 2a68eee8e2583f4c2555d8115557dd3d 262 Pfam PF03167 Uracil DNA glycosylase superfamily 82 241 1.3E-22 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS06475 2a68eee8e2583f4c2555d8115557dd3d 262 SMART SM00987 78 242 2.0E-38 T 22-04-2016 JE55_RS06475 2a68eee8e2583f4c2555d8115557dd3d 262 SUPERFAMILY SSF52141 34 254 6.35E-82 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS06475 2a68eee8e2583f4c2555d8115557dd3d 262 Gene3D G3DSA:3.40.470.10 26 254 6.6E-93 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS06475 2a68eee8e2583f4c2555d8115557dd3d 262 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 35 253 38.157 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 JE55_RS06475 2a68eee8e2583f4c2555d8115557dd3d 262 SMART SM00986 78 242 2.0E-38 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS06475 2a68eee8e2583f4c2555d8115557dd3d 262 PANTHER PTHR11264 34 262 3.1E-116 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 JE55_RS02245 92eabac806a9717e1bf10196c5b06d4a 699 Pfam PF01432 Peptidase family M3 227 690 1.3E-142 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 JE55_RS02245 92eabac806a9717e1bf10196c5b06d4a 699 PANTHER PTHR11804 7 698 1.0E-285 T 22-04-2016 JE55_RS02245 92eabac806a9717e1bf10196c5b06d4a 699 PANTHER PTHR11804:SF8 7 698 1.0E-285 T 22-04-2016 JE55_RS02245 92eabac806a9717e1bf10196c5b06d4a 699 Gene3D G3DSA:3.40.390.10 369 512 1.4E-58 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 JE55_RS02245 92eabac806a9717e1bf10196c5b06d4a 699 Gene3D G3DSA:1.20.1050.40 17 143 2.1E-18 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal JE55_RS02245 92eabac806a9717e1bf10196c5b06d4a 699 SUPERFAMILY SSF55486 8 690 1.01E-198 T 22-04-2016 JE55_RS02245 92eabac806a9717e1bf10196c5b06d4a 699 Gene3D G3DSA:1.10.1370.10 145 358 5.1E-136 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 JE55_RS02245 92eabac806a9717e1bf10196c5b06d4a 699 Gene3D G3DSA:1.10.1370.10 513 691 5.1E-136 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 JE55_RS13235 caf1f3f2b065ded055367d5bf5f536b4 207 Gene3D G3DSA:3.40.50.300 2 198 6.7E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13235 caf1f3f2b065ded055367d5bf5f536b4 207 PANTHER PTHR13696 1 197 1.9E-22 T 22-04-2016 JE55_RS13235 caf1f3f2b065ded055367d5bf5f536b4 207 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 148 5.0E-23 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS13235 caf1f3f2b065ded055367d5bf5f536b4 207 SUPERFAMILY SSF52540 1 190 1.5E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05860 7f1113bde8fcc3814623fc8b0487275b 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 131 2.0E-10 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JE55_RS05860 7f1113bde8fcc3814623fc8b0487275b 138 PANTHER PTHR34109:SF1 12 136 1.5E-26 T 22-04-2016 JE55_RS05860 7f1113bde8fcc3814623fc8b0487275b 138 SUPERFAMILY SSF54593 10 133 1.61E-26 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS05860 7f1113bde8fcc3814623fc8b0487275b 138 PANTHER PTHR34109 12 136 1.5E-26 T 22-04-2016 JE55_RS05860 7f1113bde8fcc3814623fc8b0487275b 138 Gene3D G3DSA:3.10.180.10 14 134 3.0E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS17910 70ce73d1a56d0eece2991111d2631e98 691 Gene3D G3DSA:2.130.10.10 157 579 4.2E-162 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 JE55_RS17910 70ce73d1a56d0eece2991111d2631e98 691 PANTHER PTHR22888 561 690 4.6E-32 T 22-04-2016 JE55_RS17910 70ce73d1a56d0eece2991111d2631e98 691 SUPERFAMILY SSF49503 562 690 9.58E-29 T 22-04-2016 IPR008972 Cupredoxin JE55_RS17910 70ce73d1a56d0eece2991111d2631e98 691 TIGRFAM TIGR04244 nitrous_NosZ_RR: nitrous-oxide reductase, TAT-dependent 53 690 0.0 T 22-04-2016 IPR023644 Nitrous-oxide reductase GO:0005507|GO:0005509|GO:0050304|GO:0055114 KEGG: 00910+1.7.2.4|MetaCyc: PWY-6748|MetaCyc: PWY-7084|UniPathway: UPA00652 JE55_RS17910 70ce73d1a56d0eece2991111d2631e98 691 SUPERFAMILY SSF50974 110 569 1.29E-121 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal JE55_RS17910 70ce73d1a56d0eece2991111d2631e98 691 Gene3D G3DSA:2.60.40.420 580 689 4.9E-47 T 22-04-2016 IPR008972 Cupredoxin JE55_RS17910 70ce73d1a56d0eece2991111d2631e98 691 PANTHER PTHR22888:SF3 561 690 4.6E-32 T 22-04-2016 JE55_RS17910 70ce73d1a56d0eece2991111d2631e98 691 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 632 683 8.9E-6 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 JE55_RS15270 c6cd27e37965bd5b04546ca1f0013777 233 SMART SM00862 152 229 9.3E-30 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS15270 c6cd27e37965bd5b04546ca1f0013777 233 Gene3D G3DSA:1.10.10.10 128 231 5.4E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15270 c6cd27e37965bd5b04546ca1f0013777 233 Gene3D G3DSA:3.40.50.2300 3 125 9.4E-40 T 22-04-2016 JE55_RS15270 c6cd27e37965bd5b04546ca1f0013777 233 SUPERFAMILY SSF46894 124 229 1.93E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS15270 c6cd27e37965bd5b04546ca1f0013777 233 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 229 1.1E-105 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 JE55_RS15270 c6cd27e37965bd5b04546ca1f0013777 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 229 8.9E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS15270 c6cd27e37965bd5b04546ca1f0013777 233 PANTHER PTHR26402 3 229 4.4E-114 T 22-04-2016 JE55_RS15270 c6cd27e37965bd5b04546ca1f0013777 233 PANTHER PTHR26402:SF576 3 229 4.4E-114 T 22-04-2016 JE55_RS15270 c6cd27e37965bd5b04546ca1f0013777 233 SMART SM00448 3 116 6.8E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS15270 c6cd27e37965bd5b04546ca1f0013777 233 SUPERFAMILY SSF52172 2 127 1.57E-41 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS15270 c6cd27e37965bd5b04546ca1f0013777 233 Pfam PF00072 Response regulator receiver domain 5 117 5.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS02530 ac7277d591022704c400971553b25b9c 148 Pfam PF08859 DGC domain 10 111 2.9E-33 T 22-04-2016 IPR014958 DGC JE55_RS02530 ac7277d591022704c400971553b25b9c 148 PIRSF PIRSF037181 1 141 9.1E-55 T 22-04-2016 IPR014958 DGC JE55_RS06530 f1c9ae1ee16ba62e07c2c19103de8fad 277 SMART SM00342 164 250 0.002 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS06530 f1c9ae1ee16ba62e07c2c19103de8fad 277 Gene3D G3DSA:1.10.10.60 220 248 1.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS06530 f1c9ae1ee16ba62e07c2c19103de8fad 277 Pfam PF12833 Helix-turn-helix domain 170 249 1.0E-11 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS13810 90386dc5953b3fb5a5fc2cbf84c75545 122 PANTHER PTHR33751 11 117 2.8E-13 T 22-04-2016 JE55_RS13810 90386dc5953b3fb5a5fc2cbf84c75545 122 Gene3D G3DSA:1.10.760.10 21 115 2.6E-24 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS13810 90386dc5953b3fb5a5fc2cbf84c75545 122 SUPERFAMILY SSF46626 8 116 1.98E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS13810 90386dc5953b3fb5a5fc2cbf84c75545 122 Pfam PF00034 Cytochrome c 30 114 1.8E-11 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 Gene3D G3DSA:3.40.50.1000 101 234 8.4E-42 T 22-04-2016 IPR023214 HAD-like domain JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 Gene3D G3DSA:3.40.50.1000 20 37 8.4E-42 T 22-04-2016 IPR023214 HAD-like domain JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 166 186 3.2E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 117 130 3.2E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 21 32 3.2E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 164 3.2E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 PANTHER PTHR18901:SF24 22 235 1.0E-83 T 22-04-2016 JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 SUPERFAMILY SSF56784 22 234 2.8E-55 T 22-04-2016 IPR023214 HAD-like domain JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 108 202 3.9E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 PANTHER PTHR18901 22 235 1.0E-83 T 22-04-2016 JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 Gene3D G3DSA:1.10.150.240 38 100 2.4E-7 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 24 234 3.2E-56 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 119 198 3.6E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS03640 b7c5ffb88b46c08d84cafbcd265dbca2 241 Pfam PF13419 Haloacid dehalogenase-like hydrolase 24 203 3.1E-32 T 22-04-2016 IPR023214 HAD-like domain JE55_RS01730 21be797cdeb59cb3b0394ac01bc417fd 191 SUPERFAMILY SSF88723 8 119 9.48E-6 T 22-04-2016 IPR029060 PIN domain-like JE55_RS01730 21be797cdeb59cb3b0394ac01bc417fd 191 Pfam PF13470 PIN domain 7 114 6.6E-11 T 22-04-2016 IPR002716 PIN domain JE55_RS11930 1b528a4fc4a1b0ae26d42060d09f6b99 586 Pfam PF01565 FAD binding domain 79 191 3.4E-14 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JE55_RS11930 1b528a4fc4a1b0ae26d42060d09f6b99 586 Gene3D G3DSA:3.40.462.10 262 536 7.2E-142 T 22-04-2016 IPR016170 Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain KEGG: 00908+1.5.99.12 JE55_RS11930 1b528a4fc4a1b0ae26d42060d09f6b99 586 Gene3D G3DSA:3.30.465.10 138 260 7.8E-39 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 JE55_RS11930 1b528a4fc4a1b0ae26d42060d09f6b99 586 SUPERFAMILY SSF55103 263 585 6.54E-155 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JE55_RS11930 1b528a4fc4a1b0ae26d42060d09f6b99 586 SUPERFAMILY SSF56176 49 259 7.94E-37 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS11930 1b528a4fc4a1b0ae26d42060d09f6b99 586 PANTHER PTHR13878 551 586 4.3E-21 T 22-04-2016 JE55_RS11930 1b528a4fc4a1b0ae26d42060d09f6b99 586 PANTHER PTHR13878 63 535 4.3E-21 T 22-04-2016 JE55_RS11930 1b528a4fc4a1b0ae26d42060d09f6b99 586 Gene3D G3DSA:1.10.45.10 537 586 1.5E-25 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JE55_RS11930 1b528a4fc4a1b0ae26d42060d09f6b99 586 Pfam PF09129 Cholesterol oxidase, substrate-binding 264 585 1.3E-160 T 22-04-2016 IPR015213 Cholesterol oxidase, substrate-binding JE55_RS11930 1b528a4fc4a1b0ae26d42060d09f6b99 586 Gene3D G3DSA:3.30.43.10 59 132 1.2E-27 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 JE55_RS14415 8b8536efdfd523289d361aadbc338905 161 PANTHER PTHR10371 3 159 1.2E-57 T 22-04-2016 JE55_RS14415 8b8536efdfd523289d361aadbc338905 161 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 9 159 1.0E-59 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 JE55_RS14415 8b8536efdfd523289d361aadbc338905 161 SUPERFAMILY SSF52833 4 159 4.58E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS14415 8b8536efdfd523289d361aadbc338905 161 Gene3D G3DSA:3.40.30.10 76 158 5.4E-5 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS14415 8b8536efdfd523289d361aadbc338905 161 PIRSF PIRSF000216 1 161 2.8E-57 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 JE55_RS14415 8b8536efdfd523289d361aadbc338905 161 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 11 159 1.2E-49 T 22-04-2016 JE55_RS05920 4471bb2a3a80b74a294c6d45377bc047 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 322 5.6E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS05920 4471bb2a3a80b74a294c6d45377bc047 334 PANTHER PTHR32196:SF37 31 334 2.7E-117 T 22-04-2016 JE55_RS05920 4471bb2a3a80b74a294c6d45377bc047 334 PANTHER PTHR32196 31 334 2.7E-117 T 22-04-2016 JE55_RS17560 55d7ccaa0e3e349aae75f99758ebcf86 201 SUPERFAMILY SSF52540 31 196 1.28E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17560 55d7ccaa0e3e349aae75f99758ebcf86 201 PANTHER PTHR11055 9 193 3.4E-96 T 22-04-2016 JE55_RS17560 55d7ccaa0e3e349aae75f99758ebcf86 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 28 200 34.986 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 JE55_RS17560 55d7ccaa0e3e349aae75f99758ebcf86 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 12 194 1.0E-71 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 JE55_RS17560 55d7ccaa0e3e349aae75f99758ebcf86 201 Pfam PF01583 Adenylylsulphate kinase 31 183 1.9E-64 T 22-04-2016 JE55_RS17560 55d7ccaa0e3e349aae75f99758ebcf86 201 Gene3D G3DSA:3.40.50.300 7 194 1.0E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05940 f83d7d311f563bd949cea0be0f7cdc04 227 Gene3D G3DSA:3.20.20.70 18 219 3.3E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS05940 f83d7d311f563bd949cea0be0f7cdc04 227 PANTHER PTHR30246 9 227 2.2E-56 T 22-04-2016 JE55_RS05940 f83d7d311f563bd949cea0be0f7cdc04 227 Pfam PF01081 KDPG and KHG aldolase 26 198 7.5E-30 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 JE55_RS05940 f83d7d311f563bd949cea0be0f7cdc04 227 SUPERFAMILY SSF51569 18 207 1.41E-52 T 22-04-2016 JE55_RS05940 f83d7d311f563bd949cea0be0f7cdc04 227 PANTHER PTHR30246:SF1 9 227 2.2E-56 T 22-04-2016 JE55_RS00535 9ed9804c9376fba25d40e998fc973f9d 240 PANTHER PTHR24198 58 228 1.5E-38 T 22-04-2016 JE55_RS00535 9ed9804c9376fba25d40e998fc973f9d 240 PRINTS PR01415 Ankyrin repeat signature 183 197 6.9E-7 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 JE55_RS00535 9ed9804c9376fba25d40e998fc973f9d 240 PRINTS PR01415 Ankyrin repeat signature 135 150 6.9E-7 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 JE55_RS00535 9ed9804c9376fba25d40e998fc973f9d 240 SUPERFAMILY SSF48403 44 221 1.22E-41 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain JE55_RS00535 9ed9804c9376fba25d40e998fc973f9d 240 Pfam PF12796 Ankyrin repeats (3 copies) 133 198 2.6E-15 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain JE55_RS00535 9ed9804c9376fba25d40e998fc973f9d 240 Pfam PF13606 Ankyrin repeat 105 132 0.0014 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 JE55_RS00535 9ed9804c9376fba25d40e998fc973f9d 240 Gene3D G3DSA:1.25.40.20 45 226 3.9E-44 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain JE55_RS00535 9ed9804c9376fba25d40e998fc973f9d 240 SMART SM00248 167 196 0.0043 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 JE55_RS00535 9ed9804c9376fba25d40e998fc973f9d 240 SMART SM00248 104 133 0.0015 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 JE55_RS00535 9ed9804c9376fba25d40e998fc973f9d 240 SMART SM00248 70 100 2800.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 JE55_RS00535 9ed9804c9376fba25d40e998fc973f9d 240 SMART SM00248 134 163 4.0E-6 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 JE55_RS10840 b1dcdf49ec4e12fb09dcc41206320ca7 491 PANTHER PTHR35369 36 491 2.7E-64 T 22-04-2016 JE55_RS10840 b1dcdf49ec4e12fb09dcc41206320ca7 491 Pfam PF00817 impB/mucB/samB family 32 144 4.6E-6 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS10840 b1dcdf49ec4e12fb09dcc41206320ca7 491 SUPERFAMILY SSF56672 6 229 4.45E-32 T 22-04-2016 JE55_RS10840 b1dcdf49ec4e12fb09dcc41206320ca7 491 PANTHER PTHR35369:SF2 36 491 2.7E-64 T 22-04-2016 JE55_RS06870 51012b06f1bdbf08d22424a70aae23ec 216 Gene3D G3DSA:1.20.58.430 24 204 5.2E-36 T 22-04-2016 IPR023220 Type IV secretion system, VirB5-domain JE55_RS06870 51012b06f1bdbf08d22424a70aae23ec 216 Pfam PF07996 Type IV secretion system proteins 24 204 1.1E-28 T 22-04-2016 IPR014158 Type IV secretion system, VirB5 JE55_RS06870 51012b06f1bdbf08d22424a70aae23ec 216 SUPERFAMILY SSF101082 24 198 2.75E-37 T 22-04-2016 IPR023220 Type IV secretion system, VirB5-domain JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 PRINTS PR01576 Peptide deformylase signature 109 127 5.4E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 PRINTS PR01576 Peptide deformylase signature 33 62 5.4E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 PRINTS PR01576 Peptide deformylase signature 128 157 5.4E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 PRINTS PR01576 Peptide deformylase signature 97 108 5.4E-29 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 SUPERFAMILY SSF56420 1 163 6.15E-57 T 22-04-2016 IPR023635 Peptide deformylase JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 Gene3D G3DSA:3.90.45.10 1 162 5.2E-54 T 22-04-2016 IPR023635 Peptide deformylase JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 Hamap MF_00163 Peptide deformylase [def]. 1 166 26.284 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 3 157 2.7E-32 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 PIRSF PIRSF004749 1 165 5.1E-48 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 Pfam PF01327 Polypeptide deformylase 3 157 1.4E-47 T 22-04-2016 IPR023635 Peptide deformylase JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 PANTHER PTHR10458:SF4 1 163 3.0E-75 T 22-04-2016 JE55_RS01220 a830df2017988e7ff9374e8c58925c59 177 PANTHER PTHR10458 1 163 3.0E-75 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 JE55_RS30200 61247579209e07dc9db9de6175d812b2 234 Gene3D G3DSA:2.40.50.140 204 234 8.3E-8 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS30200 61247579209e07dc9db9de6175d812b2 234 Gene3D G3DSA:1.10.730.10 1 122 6.3E-33 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS30200 61247579209e07dc9db9de6175d812b2 234 SUPERFAMILY SSF47323 201 224 1.76E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS30200 61247579209e07dc9db9de6175d812b2 234 SUPERFAMILY SSF47323 1 169 1.76E-36 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS30200 61247579209e07dc9db9de6175d812b2 234 PANTHER PTHR11946:SF1 2 234 1.4E-25 T 22-04-2016 JE55_RS30200 61247579209e07dc9db9de6175d812b2 234 PANTHER PTHR11946 2 234 1.4E-25 T 22-04-2016 JE55_RS07435 dad9811d2894ce3bbcd1f700d8e15f9e 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 124 25.319 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07435 dad9811d2894ce3bbcd1f700d8e15f9e 124 SUPERFAMILY SSF48300 4 60 7.98E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07435 dad9811d2894ce3bbcd1f700d8e15f9e 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 5.1E-18 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07435 dad9811d2894ce3bbcd1f700d8e15f9e 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 6.5E-49 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07435 dad9811d2894ce3bbcd1f700d8e15f9e 124 SUPERFAMILY SSF54736 53 124 7.32E-25 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JE55_RS07435 dad9811d2894ce3bbcd1f700d8e15f9e 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 124 2.0E-27 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 JE55_RS07435 dad9811d2894ce3bbcd1f700d8e15f9e 124 Gene3D G3DSA:3.30.1390.10 53 124 3.3E-34 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JE55_RS07435 dad9811d2894ce3bbcd1f700d8e15f9e 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 2.3E-31 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 JE55_RS07435 dad9811d2894ce3bbcd1f700d8e15f9e 124 Gene3D G3DSA:1.20.5.710 2 52 8.4E-22 T 22-04-2016 JE55_RS01295 a601e1bd2c7a4a9f60ffd491d37b7386 88 Pfam PF11065 Protein of unknown function (DUF2866) 15 77 1.1E-31 T 22-04-2016 IPR021294 Protein of unknown function DUF2866 JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 PRINTS PR00721 Stomatin signature 27 49 5.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 PRINTS PR00721 Stomatin signature 154 172 5.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 PRINTS PR00721 Stomatin signature 110 127 5.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 PRINTS PR00721 Stomatin signature 75 96 5.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 PRINTS PR00721 Stomatin signature 173 194 5.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 PRINTS PR00721 Stomatin signature 130 153 5.5E-31 T 22-04-2016 IPR001972 Stomatin family GO:0016020 JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 PANTHER PTHR10264 4 301 9.4E-141 T 22-04-2016 IPR001972 Stomatin family GO:0016020 JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 PANTHER PTHR10264:SF27 4 301 9.4E-141 T 22-04-2016 JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 SUPERFAMILY SSF117892 51 185 1.18E-39 T 22-04-2016 IPR001107 Band 7 domain JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 SMART SM00244 20 178 5.9E-57 T 22-04-2016 IPR001107 Band 7 domain JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 Pfam PF01145 SPFH domain / Band 7 family 24 193 5.3E-30 T 22-04-2016 IPR001107 Band 7 domain JE55_RS01085 ba299fdba2bb1fcc9130b9d7f6b50eac 315 Pfam PF16200 C-terminal region of band_7 243 302 2.7E-25 T 22-04-2016 IPR032435 Band 7, C-terminal extension JE55_RS15445 b5ab5667b5855121c61aa66d4af09f6d 740 PANTHER PTHR32438 627 740 4.3E-117 T 22-04-2016 JE55_RS15445 b5ab5667b5855121c61aa66d4af09f6d 740 PANTHER PTHR32438 127 582 4.3E-117 T 22-04-2016 JE55_RS15445 b5ab5667b5855121c61aa66d4af09f6d 740 Gene3D G3DSA:3.20.20.80 163 594 1.5E-155 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15445 b5ab5667b5855121c61aa66d4af09f6d 740 Gene3D G3DSA:3.20.20.80 662 736 1.5E-155 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS15445 b5ab5667b5855121c61aa66d4af09f6d 740 SUPERFAMILY SSF51445 165 591 1.73E-132 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15445 b5ab5667b5855121c61aa66d4af09f6d 740 SUPERFAMILY SSF51445 658 728 1.73E-132 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS15445 b5ab5667b5855121c61aa66d4af09f6d 740 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 164 586 5.7E-87 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JE55_RS15445 b5ab5667b5855121c61aa66d4af09f6d 740 PANTHER PTHR32438:SF5 627 740 4.3E-117 T 22-04-2016 JE55_RS15445 b5ab5667b5855121c61aa66d4af09f6d 740 PANTHER PTHR32438:SF5 127 582 4.3E-117 T 22-04-2016 JE55_RS15445 b5ab5667b5855121c61aa66d4af09f6d 740 Pfam PF02446 4-alpha-glucanotransferase 170 714 9.8E-102 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 Pfam PF01926 50S ribosome-binding GTPase 198 317 2.3E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 Pfam PF13167 GTP-binding GTPase N-terminal 22 110 4.6E-29 T 22-04-2016 IPR025121 GTPase HflX, N-terminal JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 Pfam PF16360 GTP-binding GTPase Middle Region 112 190 1.6E-30 T 22-04-2016 IPR032305 GTP-binding protein, middle domain JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 PIRSF PIRSF006809 3 373 2.8E-140 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 PANTHER PTHR10229 18 361 1.0E-155 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 Hamap MF_00900 GTPase HflX [hflX]. 25 388 45.767 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 266 284 6.8E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 237 6.8E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 198 218 6.8E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 Gene3D G3DSA:3.40.50.300 196 363 5.5E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 SUPERFAMILY SSF52540 196 365 7.76E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 PANTHER PTHR10229:SF0 18 361 1.0E-155 T 22-04-2016 JE55_RS00125 61f959c61137002f1958f5fa7aa3692c 392 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 9 361 5.6E-148 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 JE55_RS16860 1fc9e9d3cc2780397bb0bda7375bcd67 350 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 132 248 8.3E-30 T 22-04-2016 IPR031571 Flp pilus assembly protein RcpC/CpaB domain JE55_RS16860 1fc9e9d3cc2780397bb0bda7375bcd67 350 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 7 314 1.4E-52 T 22-04-2016 IPR017592 Pilus assembly, Flp-type CpaB JE55_RS17415 5eeeef61d9061bf873b0e23af463d1f6 410 PANTHER PTHR23530 17 390 2.9E-30 T 22-04-2016 JE55_RS17415 5eeeef61d9061bf873b0e23af463d1f6 410 Pfam PF07690 Major Facilitator Superfamily 48 342 2.3E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS17415 5eeeef61d9061bf873b0e23af463d1f6 410 SUPERFAMILY SSF103473 43 401 4.19E-31 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS17415 5eeeef61d9061bf873b0e23af463d1f6 410 Gene3D G3DSA:1.20.1250.20 37 203 5.1E-14 T 22-04-2016 JE55_RS17415 5eeeef61d9061bf873b0e23af463d1f6 410 Gene3D G3DSA:1.20.1250.20 227 400 4.1E-6 T 22-04-2016 JE55_RS17415 5eeeef61d9061bf873b0e23af463d1f6 410 PANTHER PTHR23530:SF1 17 390 2.9E-30 T 22-04-2016 JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 104 121 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 PANTHER PTHR30251 1 239 3.7E-69 T 22-04-2016 JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 PRINTS PR00969 Pili chaperone signature 30 39 8.2E-31 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 PRINTS PR00969 Pili chaperone signature 76 97 8.2E-31 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 PRINTS PR00969 Pili chaperone signature 166 181 8.2E-31 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 PRINTS PR00969 Pili chaperone signature 128 143 8.2E-31 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 PRINTS PR00969 Pili chaperone signature 105 122 8.2E-31 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 146 1.2E-40 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 SUPERFAMILY SSF49584 156 242 6.28E-19 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 SUPERFAMILY SSF49354 25 146 9.94E-39 T 22-04-2016 IPR008962 PapD-like JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 172 230 3.6E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 Gene3D G3DSA:2.60.40.1070 158 241 2.5E-19 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal JE55_RS16970 578dfa37e327b87a3f6ab9d3c8f90033 246 Gene3D G3DSA:2.60.40.360 30 146 3.9E-43 T 22-04-2016 IPR008962 PapD-like JE55_RS03215 bbf346fd82c5a6fcc25d81a597af18da 333 Gene3D G3DSA:3.90.226.10 60 184 1.8E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS03215 bbf346fd82c5a6fcc25d81a597af18da 333 Gene3D G3DSA:3.90.226.10 222 308 1.8E-45 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS03215 bbf346fd82c5a6fcc25d81a597af18da 333 SUPERFAMILY SSF52096 78 192 1.45E-39 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS03215 bbf346fd82c5a6fcc25d81a597af18da 333 SUPERFAMILY SSF52096 221 281 1.45E-39 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS03215 bbf346fd82c5a6fcc25d81a597af18da 333 Pfam PF01343 Peptidase family S49 148 288 9.4E-35 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 JE55_RS03215 bbf346fd82c5a6fcc25d81a597af18da 333 PANTHER PTHR30341 2 317 3.3E-87 T 22-04-2016 JE55_RS03215 bbf346fd82c5a6fcc25d81a597af18da 333 PANTHER PTHR30341:SF1 2 317 3.3E-87 T 22-04-2016 JE55_RS05245 33e33157bebbc27faf427c640d01a775 402 PANTHER PTHR22924:SF49 12 397 9.3E-137 T 22-04-2016 JE55_RS05245 33e33157bebbc27faf427c640d01a775 402 Gene3D G3DSA:2.40.30.10 148 260 3.4E-32 T 22-04-2016 JE55_RS05245 33e33157bebbc27faf427c640d01a775 402 SUPERFAMILY SSF52343 262 397 9.69E-37 T 22-04-2016 JE55_RS05245 33e33157bebbc27faf427c640d01a775 402 Pfam PF00970 Oxidoreductase FAD-binding domain 154 258 2.0E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain JE55_RS05245 33e33157bebbc27faf427c640d01a775 402 SUPERFAMILY SSF46458 4 152 7.65E-42 T 22-04-2016 IPR009050 Globin-like JE55_RS05245 33e33157bebbc27faf427c640d01a775 402 Pfam PF00042 Globin 9 104 7.5E-11 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 JE55_RS05245 33e33157bebbc27faf427c640d01a775 402 PANTHER PTHR22924 12 397 9.3E-137 T 22-04-2016 JE55_RS05245 33e33157bebbc27faf427c640d01a775 402 Gene3D G3DSA:3.40.50.80 264 398 8.4E-35 T 22-04-2016 JE55_RS05245 33e33157bebbc27faf427c640d01a775 402 Pfam PF00175 Oxidoreductase NAD-binding domain 270 378 8.0E-15 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 JE55_RS05245 33e33157bebbc27faf427c640d01a775 402 Gene3D G3DSA:1.10.490.10 4 144 6.4E-53 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 JE55_RS05245 33e33157bebbc27faf427c640d01a775 402 SUPERFAMILY SSF63380 148 260 2.33E-26 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 PRINTS PR00149 Fumarate lyase superfamily signature 122 140 7.1E-18 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 PRINTS PR00149 Fumarate lyase superfamily signature 168 186 7.1E-18 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 PRINTS PR00149 Fumarate lyase superfamily signature 300 316 7.1E-18 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 PRINTS PR00149 Fumarate lyase superfamily signature 257 284 7.1E-18 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 SUPERFAMILY SSF48557 7 453 4.87E-106 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 ProSitePatterns PS00163 Fumarate lyases signature. 300 309 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 Pfam PF08328 Adenylosuccinate lyase C-terminal 337 451 1.9E-51 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 Gene3D G3DSA:1.10.275.10 9 124 1.7E-46 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 Gene3D G3DSA:1.10.40.30 396 451 4.1E-32 T 22-04-2016 JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 PANTHER PTHR11444:SF17 11 461 2.2E-267 T 22-04-2016 JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 Gene3D G3DSA:1.20.200.10 125 395 2.4E-87 T 22-04-2016 JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 18 461 2.8E-125 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 Pfam PF00206 Lyase 20 318 5.5E-58 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal JE55_RS05725 41c90168e6c797135a96263c40c8795c 462 PANTHER PTHR11444 11 461 2.2E-267 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 Gene3D G3DSA:3.40.190.10 89 175 3.7E-32 T 22-04-2016 JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.5E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 Pfam PF03466 LysR substrate binding domain 87 291 1.8E-42 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 Gene3D G3DSA:1.10.10.10 1 80 3.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 SUPERFAMILY SSF53850 87 295 2.33E-36 T 22-04-2016 JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 Gene3D G3DSA:3.40.190.10 176 265 1.5E-33 T 22-04-2016 JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 PANTHER PTHR30346 1 271 2.1E-105 T 22-04-2016 JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 SUPERFAMILY SSF46785 1 82 4.08E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02375 77ea0401918c6928000d85c136e584e6 300 PANTHER PTHR30346:SF4 1 271 2.1E-105 T 22-04-2016 JE55_RS21295 bb74f24c080ca8b524ef87a73bfe85f0 128 PANTHER PTHR18901:SF40 2 128 8.2E-30 T 22-04-2016 JE55_RS21295 bb74f24c080ca8b524ef87a73bfe85f0 128 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 17 118 1.4E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS21295 bb74f24c080ca8b524ef87a73bfe85f0 128 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 116 1.0E-21 T 22-04-2016 IPR023214 HAD-like domain JE55_RS21295 bb74f24c080ca8b524ef87a73bfe85f0 128 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 21 112 8.3E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS21295 bb74f24c080ca8b524ef87a73bfe85f0 128 SUPERFAMILY SSF56784 3 125 1.76E-35 T 22-04-2016 IPR023214 HAD-like domain JE55_RS21295 bb74f24c080ca8b524ef87a73bfe85f0 128 PANTHER PTHR18901 2 128 8.2E-30 T 22-04-2016 JE55_RS21295 bb74f24c080ca8b524ef87a73bfe85f0 128 Gene3D G3DSA:3.40.50.1000 6 128 1.0E-36 T 22-04-2016 IPR023214 HAD-like domain JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 94 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 105 3.0E-19 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 Pfam PF01872 RibD C-terminal domain 153 360 7.6E-46 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 SUPERFAMILY SSF53597 151 364 4.64E-59 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 10 360 3.8E-112 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 PIRSF PIRSF006769 1 368 1.1E-119 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 SUPERFAMILY SSF53927 6 150 5.02E-46 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 Gene3D G3DSA:3.40.140.10 6 134 1.9E-32 T 22-04-2016 JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 PANTHER PTHR11079:SF10 1 226 2.4E-61 T 22-04-2016 JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 Gene3D G3DSA:3.40.430.10 135 364 9.4E-74 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 152 364 3.9E-54 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 JE55_RS04105 d4115e00b74f06fbda9f34664ccb02a6 378 PANTHER PTHR11079 1 226 2.4E-61 T 22-04-2016 JE55_RS12925 9b54b439cd6a30107d53d6daf843e04f 77 Pfam PF00830 Ribosomal L28 family 3 62 1.6E-28 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 JE55_RS12925 9b54b439cd6a30107d53d6daf843e04f 77 Gene3D G3DSA:2.30.170.40 2 76 9.5E-38 T 22-04-2016 JE55_RS12925 9b54b439cd6a30107d53d6daf843e04f 77 PANTHER PTHR13528 1 69 5.4E-35 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 JE55_RS12925 9b54b439cd6a30107d53d6daf843e04f 77 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.7E-28 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS12925 9b54b439cd6a30107d53d6daf843e04f 77 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.586 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS12925 9b54b439cd6a30107d53d6daf843e04f 77 SUPERFAMILY SSF143800 2 75 5.89E-31 T 22-04-2016 JE55_RS16135 0dff7615f11919dd252aacbf2343d508 213 Pfam PF01144 Coenzyme A transferase 7 200 3.8E-42 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 JE55_RS16135 0dff7615f11919dd252aacbf2343d508 213 SMART SM00882 6 202 1.9E-83 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 JE55_RS16135 0dff7615f11919dd252aacbf2343d508 213 SUPERFAMILY SSF100950 3 211 2.01E-73 T 22-04-2016 JE55_RS16135 0dff7615f11919dd252aacbf2343d508 213 Gene3D G3DSA:3.40.810.20 3 210 1.9E-95 T 22-04-2016 JE55_RS16135 0dff7615f11919dd252aacbf2343d508 213 PANTHER PTHR13707 2 210 1.9E-133 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 JE55_RS16135 0dff7615f11919dd252aacbf2343d508 213 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 22-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 JE55_RS16135 0dff7615f11919dd252aacbf2343d508 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 1.2E-99 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 SUPERFAMILY SSF82693 663 703 4.45E-8 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 SUPERFAMILY SSF82693 857 903 4.45E-8 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 SUPERFAMILY SSF82714 707 776 2.22E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS14700 7779174f98b994197195482f0eba8600 1100 Pfam PF00873 AcrB/AcrD/AcrF family 5 776 6.2E-235 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 Pfam PF00873 AcrB/AcrD/AcrF family 836 1076 1.2E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 Gene3D G3DSA:3.30.2090.10 182 263 1.6E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS14700 7779174f98b994197195482f0eba8600 1100 Gene3D G3DSA:3.30.2090.10 842 851 5.8E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS14700 7779174f98b994197195482f0eba8600 1100 Gene3D G3DSA:3.30.2090.10 708 774 5.8E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS14700 7779174f98b994197195482f0eba8600 1100 Gene3D G3DSA:3.30.70.1430 40 142 1.3E-28 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 SUPERFAMILY SSF82866 290 490 1.28E-50 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 Gene3D G3DSA:3.30.70.1430 560 647 1.7E-11 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.5E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.5E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.5E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.5E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.5E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PRINTS PR00702 Acriflavin resistance protein family signature 607 621 1.5E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.5E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 1.5E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.5E-82 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 Gene3D G3DSA:1.10.3850.10 276 490 3.8E-61 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 Gene3D G3DSA:1.10.3850.10 863 1078 3.6E-52 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 SUPERFAMILY SSF82866 881 1078 1.57E-42 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PANTHER PTHR32063:SF34 844 1090 0.0 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PANTHER PTHR32063:SF34 1 776 0.0 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PANTHER PTHR32063 844 1090 0.0 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 PANTHER PTHR32063 1 776 0.0 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 SUPERFAMILY SSF82693 137 182 6.8E-22 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 SUPERFAMILY SSF82693 268 324 6.8E-22 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 SUPERFAMILY SSF82714 183 266 1.06E-14 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS14700 7779174f98b994197195482f0eba8600 1100 SUPERFAMILY SSF82693 557 652 1.62E-15 T 22-04-2016 JE55_RS14700 7779174f98b994197195482f0eba8600 1100 SUPERFAMILY SSF82693 40 134 1.41E-22 T 22-04-2016 JE55_RS01460 c49ef9f85f19522610e20c72a67b8e7f 650 PANTHER PTHR30290 427 650 5.6E-153 T 22-04-2016 JE55_RS01460 c49ef9f85f19522610e20c72a67b8e7f 650 PANTHER PTHR30290 33 400 5.6E-153 T 22-04-2016 JE55_RS01460 c49ef9f85f19522610e20c72a67b8e7f 650 PIRSF PIRSF002741 39 641 5.5E-91 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JE55_RS01460 c49ef9f85f19522610e20c72a67b8e7f 650 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 140 550 1.2E-75 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain JE55_RS01460 c49ef9f85f19522610e20c72a67b8e7f 650 PANTHER PTHR30290:SF2 427 650 5.6E-153 T 22-04-2016 JE55_RS01460 c49ef9f85f19522610e20c72a67b8e7f 650 PANTHER PTHR30290:SF2 33 400 5.6E-153 T 22-04-2016 JE55_RS01460 c49ef9f85f19522610e20c72a67b8e7f 650 Gene3D G3DSA:3.10.105.10 352 404 2.3E-47 T 22-04-2016 JE55_RS01460 c49ef9f85f19522610e20c72a67b8e7f 650 Gene3D G3DSA:3.10.105.10 437 608 2.3E-47 T 22-04-2016 JE55_RS01460 c49ef9f85f19522610e20c72a67b8e7f 650 Gene3D G3DSA:3.90.76.10 105 261 5.7E-30 T 22-04-2016 JE55_RS01460 c49ef9f85f19522610e20c72a67b8e7f 650 SUPERFAMILY SSF53850 87 403 1.52E-113 T 22-04-2016 JE55_RS01460 c49ef9f85f19522610e20c72a67b8e7f 650 SUPERFAMILY SSF53850 431 637 1.52E-113 T 22-04-2016 JE55_RS15780 6cf2dcace96d2a7d004f3e99a2aba144 395 SUPERFAMILY SSF111369 94 183 1.96E-11 T 22-04-2016 JE55_RS15780 6cf2dcace96d2a7d004f3e99a2aba144 395 SUPERFAMILY SSF111369 213 335 6.15E-13 T 22-04-2016 JE55_RS15780 6cf2dcace96d2a7d004f3e99a2aba144 395 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 93 340 9.8E-15 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JE55_RS15780 6cf2dcace96d2a7d004f3e99a2aba144 395 PANTHER PTHR30386:SF7 58 394 2.2E-78 T 22-04-2016 JE55_RS15780 6cf2dcace96d2a7d004f3e99a2aba144 395 Gene3D G3DSA:2.40.50.100 95 127 1.7E-15 T 22-04-2016 JE55_RS15780 6cf2dcace96d2a7d004f3e99a2aba144 395 Gene3D G3DSA:2.40.50.100 264 296 1.7E-15 T 22-04-2016 JE55_RS15780 6cf2dcace96d2a7d004f3e99a2aba144 395 PANTHER PTHR30386 58 394 2.2E-78 T 22-04-2016 JE55_RS15260 14ceec76576a36c60fbdb96a6bcd963e 282 SUPERFAMILY SSF52540 35 265 3.27E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15260 14ceec76576a36c60fbdb96a6bcd963e 282 PANTHER PTHR24220 37 277 1.1E-163 T 22-04-2016 JE55_RS15260 14ceec76576a36c60fbdb96a6bcd963e 282 Pfam PF00005 ABC transporter 51 206 4.8E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS15260 14ceec76576a36c60fbdb96a6bcd963e 282 PANTHER PTHR24220:SF560 37 277 1.1E-163 T 22-04-2016 JE55_RS15260 14ceec76576a36c60fbdb96a6bcd963e 282 SMART SM00382 60 270 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS15260 14ceec76576a36c60fbdb96a6bcd963e 282 ProSitePatterns PS00211 ABC transporters family signature. 179 193 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS15260 14ceec76576a36c60fbdb96a6bcd963e 282 Gene3D G3DSA:3.40.50.300 32 273 1.4E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15260 14ceec76576a36c60fbdb96a6bcd963e 282 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 36 282 2.7E-121 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 JE55_RS12240 b022dade7bc134b95b68f4283576b823 148 Pfam PF13474 SnoaL-like domain 13 127 1.8E-21 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain JE55_RS12240 b022dade7bc134b95b68f4283576b823 148 SUPERFAMILY SSF54427 1 129 2.42E-20 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS12240 b022dade7bc134b95b68f4283576b823 148 Gene3D G3DSA:3.10.450.50 8 133 9.4E-16 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS11190 b108bbd62f3cde1f6af67829e8e73820 179 PANTHER PTHR21485 9 166 8.6E-46 T 22-04-2016 JE55_RS11190 b108bbd62f3cde1f6af67829e8e73820 179 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 15 167 9.3E-48 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS11190 b108bbd62f3cde1f6af67829e8e73820 179 Gene3D G3DSA:3.40.50.1000 7 173 2.9E-40 T 22-04-2016 IPR023214 HAD-like domain JE55_RS11190 b108bbd62f3cde1f6af67829e8e73820 179 PIRSF PIRSF006118 2 176 8.5E-66 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS11190 b108bbd62f3cde1f6af67829e8e73820 179 SUPERFAMILY SSF56784 11 170 1.19E-38 T 22-04-2016 IPR023214 HAD-like domain JE55_RS00525 1193d725919c7b8d57cd1dd854b10a39 395 PANTHER PTHR30566:SF10 51 374 2.3E-99 T 22-04-2016 JE55_RS00525 1193d725919c7b8d57cd1dd854b10a39 395 Gene3D G3DSA:2.30.30.60 204 253 2.3E-6 T 22-04-2016 JE55_RS00525 1193d725919c7b8d57cd1dd854b10a39 395 PANTHER PTHR30566 51 374 2.3E-99 T 22-04-2016 JE55_RS00525 1193d725919c7b8d57cd1dd854b10a39 395 SUPERFAMILY SSF50182 189 254 2.84E-13 T 22-04-2016 IPR010920 LSM domain JE55_RS00525 1193d725919c7b8d57cd1dd854b10a39 395 Pfam PF00924 Mechanosensitive ion channel 147 328 1.2E-24 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 JE55_RS03455 88557970311373f13808dd3a83dfb157 196 SUPERFAMILY SSF55729 3 137 9.76E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS03455 88557970311373f13808dd3a83dfb157 196 Pfam PF13527 Acetyltransferase (GNAT) domain 58 137 9.8E-8 T 22-04-2016 JE55_RS03455 88557970311373f13808dd3a83dfb157 196 Gene3D G3DSA:3.40.630.30 46 137 3.9E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS11125 3f358b83dcd7fe78c31399af1e21109e 207 Pfam PF03550 Outer membrane lipoprotein LolB 52 206 4.7E-36 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 JE55_RS11125 3f358b83dcd7fe78c31399af1e21109e 207 Gene3D G3DSA:2.50.20.10 23 207 2.8E-45 T 22-04-2016 JE55_RS11125 3f358b83dcd7fe78c31399af1e21109e 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 17 206 6.8E-22 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 JE55_RS11125 3f358b83dcd7fe78c31399af1e21109e 207 SUPERFAMILY SSF89392 29 206 8.63E-41 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX JE55_RS09660 7db41f47f6424552e1e1502ed6d05289 305 Gene3D G3DSA:1.10.3720.10 93 299 1.1E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS09660 7db41f47f6424552e1e1502ed6d05289 305 SUPERFAMILY SSF161098 96 283 5.76E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS09660 7db41f47f6424552e1e1502ed6d05289 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 4.0E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS09660 7db41f47f6424552e1e1502ed6d05289 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 72 6.0E-10 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JE55_RS09660 7db41f47f6424552e1e1502ed6d05289 305 PANTHER PTHR30465:SF10 10 303 9.6E-119 T 22-04-2016 JE55_RS09660 7db41f47f6424552e1e1502ed6d05289 305 PANTHER PTHR30465 10 303 9.6E-119 T 22-04-2016 JE55_RS09775 098a30fa3fd4b84d9fbf3762750c97f8 413 Pfam PF07559 Flagellar basal body protein FlaE 177 295 3.6E-21 T 22-04-2016 IPR011491 Flagellar hook protein FlgE JE55_RS09775 098a30fa3fd4b84d9fbf3762750c97f8 413 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site JE55_RS09775 098a30fa3fd4b84d9fbf3762750c97f8 413 PANTHER PTHR30435:SF1 292 413 4.0E-85 T 22-04-2016 JE55_RS09775 098a30fa3fd4b84d9fbf3762750c97f8 413 PANTHER PTHR30435:SF1 1 123 4.0E-85 T 22-04-2016 JE55_RS09775 098a30fa3fd4b84d9fbf3762750c97f8 413 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 396 1.9E-95 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G JE55_RS09775 098a30fa3fd4b84d9fbf3762750c97f8 413 Pfam PF00460 Flagella basal body rod protein 5 33 1.6E-9 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JE55_RS09775 098a30fa3fd4b84d9fbf3762750c97f8 413 PANTHER PTHR30435 292 413 4.0E-85 T 22-04-2016 JE55_RS09775 098a30fa3fd4b84d9fbf3762750c97f8 413 PANTHER PTHR30435 1 123 4.0E-85 T 22-04-2016 JE55_RS09775 098a30fa3fd4b84d9fbf3762750c97f8 413 SUPERFAMILY SSF117143 79 375 2.09E-75 T 22-04-2016 JE55_RS09775 098a30fa3fd4b84d9fbf3762750c97f8 413 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 335 413 2.1E-17 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JE55_RS07860 ef8bc9eb9b98ef055a46936f383c511a 496 PANTHER PTHR11895:SF35 5 393 2.1E-133 T 22-04-2016 JE55_RS07860 ef8bc9eb9b98ef055a46936f383c511a 496 PANTHER PTHR11895:SF35 422 489 2.1E-133 T 22-04-2016 JE55_RS07860 ef8bc9eb9b98ef055a46936f383c511a 496 SUPERFAMILY SSF75304 425 479 2.35E-112 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS07860 ef8bc9eb9b98ef055a46936f383c511a 496 SUPERFAMILY SSF75304 5 398 2.35E-112 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS07860 ef8bc9eb9b98ef055a46936f383c511a 496 PANTHER PTHR11895 5 393 2.1E-133 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS07860 ef8bc9eb9b98ef055a46936f383c511a 496 PANTHER PTHR11895 422 489 2.1E-133 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS07860 ef8bc9eb9b98ef055a46936f383c511a 496 ProSitePatterns PS00571 Amidases signature. 150 181 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS07860 ef8bc9eb9b98ef055a46936f383c511a 496 Pfam PF01425 Amidase 28 471 1.2E-80 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS07860 ef8bc9eb9b98ef055a46936f383c511a 496 Gene3D G3DSA:3.90.1300.10 425 488 1.0E-109 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS07860 ef8bc9eb9b98ef055a46936f383c511a 496 Gene3D G3DSA:3.90.1300.10 7 393 1.0E-109 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS13430 2b20c19518f2f2c0a4c69883e56441ad 362 PRINTS PR00184 Neisseria sp. porin signature 57 82 1.3E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS13430 2b20c19518f2f2c0a4c69883e56441ad 362 PRINTS PR00184 Neisseria sp. porin signature 154 171 1.3E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS13430 2b20c19518f2f2c0a4c69883e56441ad 362 PRINTS PR00184 Neisseria sp. porin signature 297 321 1.3E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS13430 2b20c19518f2f2c0a4c69883e56441ad 362 Gene3D G3DSA:2.40.160.10 20 362 2.3E-76 T 22-04-2016 IPR023614 Porin domain JE55_RS13430 2b20c19518f2f2c0a4c69883e56441ad 362 Pfam PF13609 Gram-negative porin 7 325 4.9E-53 T 22-04-2016 JE55_RS13430 2b20c19518f2f2c0a4c69883e56441ad 362 SUPERFAMILY SSF56935 20 362 7.94E-70 T 22-04-2016 JE55_RS04740 f970963a0f96504fb1dae711f87723d0 268 SUPERFAMILY SSF141868 84 265 2.48E-18 T 22-04-2016 IPR001633 EAL domain JE55_RS04740 f970963a0f96504fb1dae711f87723d0 268 Pfam PF00563 EAL domain 121 265 5.6E-11 T 22-04-2016 IPR001633 EAL domain JE55_RS04740 f970963a0f96504fb1dae711f87723d0 268 Gene3D G3DSA:3.20.20.450 118 266 5.9E-10 T 22-04-2016 IPR001633 EAL domain JE55_RS04230 8a8852817f748ce2ebb133afe21e6c71 464 SMART SM00729 57 280 5.9E-46 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 JE55_RS04230 8a8852817f748ce2ebb133afe21e6c71 464 PANTHER PTHR13932:SF6 2 459 4.2E-210 T 22-04-2016 JE55_RS04230 8a8852817f748ce2ebb133afe21e6c71 464 Pfam PF06969 HemN C-terminal domain 371 439 9.5E-7 T 22-04-2016 IPR010723 HemN, C-terminal JE55_RS04230 8a8852817f748ce2ebb133afe21e6c71 464 PANTHER PTHR13932 2 459 4.2E-210 T 22-04-2016 JE55_RS04230 8a8852817f748ce2ebb133afe21e6c71 464 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 464 4.0E-176 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 JE55_RS04230 8a8852817f748ce2ebb133afe21e6c71 464 PIRSF PIRSF000167 8 464 3.9E-165 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 JE55_RS04230 8a8852817f748ce2ebb133afe21e6c71 464 Gene3D G3DSA:3.80.30.20 59 264 8.6E-26 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe JE55_RS04230 8a8852817f748ce2ebb133afe21e6c71 464 Pfam PF04055 Radical SAM superfamily 63 236 5.8E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS04230 8a8852817f748ce2ebb133afe21e6c71 464 SUPERFAMILY SSF102114 11 452 3.27E-131 T 22-04-2016 JE55_RS13000 ded0ae189205bbd4e2dac475e7debe1e 240 SUPERFAMILY SSF55120 62 227 3.84E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS13000 ded0ae189205bbd4e2dac475e7debe1e 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 JE55_RS13000 ded0ae189205bbd4e2dac475e7debe1e 240 SUPERFAMILY SSF55174 3 86 9.25E-8 T 22-04-2016 JE55_RS13000 ded0ae189205bbd4e2dac475e7debe1e 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 2.6E-40 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 JE55_RS13000 ded0ae189205bbd4e2dac475e7debe1e 240 Gene3D G3DSA:3.10.290.10 4 63 2.3E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS13000 ded0ae189205bbd4e2dac475e7debe1e 240 PANTHER PTHR21600:SF19 1 233 6.4E-47 T 22-04-2016 JE55_RS13000 ded0ae189205bbd4e2dac475e7debe1e 240 Pfam PF00849 RNA pseudouridylate synthase 62 193 6.8E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS13000 ded0ae189205bbd4e2dac475e7debe1e 240 PANTHER PTHR21600 1 233 6.4E-47 T 22-04-2016 JE55_RS13000 ded0ae189205bbd4e2dac475e7debe1e 240 Pfam PF01479 S4 domain 5 36 6.9E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 Gene3D G3DSA:3.20.20.10 38 267 6.1E-78 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 10 416 7.6E-158 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 291 394 2.3E-18 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 Gene3D G3DSA:2.40.37.10 268 419 1.7E-47 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 17 417 40.844 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 SUPERFAMILY SSF51419 28 287 6.41E-79 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 PANTHER PTHR11482:SF5 6 423 3.8E-169 T 22-04-2016 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 59 77 2.0E-22 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 275 294 2.0E-22 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 79 91 2.0E-22 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 374 387 2.0E-22 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 192 205 2.0E-22 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 166 175 4.7E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 303 321 4.7E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 77 94 4.7E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 PRINTS PR01181 Diaminopimelate decarboxylase signature 384 406 4.7E-29 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 228 243 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 PANTHER PTHR11482 6 423 3.8E-169 T 22-04-2016 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 285 1.0E-70 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 JE55_RS07200 a9945c1b5c776e8ae7e3f20e302a7103 423 SUPERFAMILY SSF50621 260 418 7.53E-54 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 SUPERFAMILY SSF50615 8 78 1.67E-23 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 PANTHER PTHR15184 8 464 0.0 T 22-04-2016 JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 6 463 57.207 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 8 463 1.4E-250 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 345 1.4E-64 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 11 76 3.3E-18 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 SUPERFAMILY SSF47917 348 463 1.36E-54 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 SUPERFAMILY SSF52540 80 350 4.21E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 Gene3D G3DSA:3.40.50.300 79 346 2.7E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 Gene3D G3DSA:2.40.10.170 7 78 1.3E-26 T 22-04-2016 JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 336 345 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 Gene3D G3DSA:1.10.1140.10 349 464 1.6E-56 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 SMART SM00382 145 330 0.007 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS08420 505a85b5cf5cb68b1cda1dbe9ca76207 464 PANTHER PTHR15184:SF44 8 464 0.0 T 22-04-2016 JE55_RS16810 15964ac82958643626f9ba3d1fc506fc 640 Gene3D G3DSA:3.40.50.300 239 325 1.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16810 15964ac82958643626f9ba3d1fc506fc 640 Gene3D G3DSA:3.40.50.300 75 154 1.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16810 15964ac82958643626f9ba3d1fc506fc 640 PANTHER PTHR30267 1 640 3.1E-270 T 22-04-2016 JE55_RS16810 15964ac82958643626f9ba3d1fc506fc 640 SUPERFAMILY SSF52540 75 344 1.9E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16810 15964ac82958643626f9ba3d1fc506fc 640 Pfam PF08298 PrkA AAA domain 20 376 6.4E-172 T 22-04-2016 IPR013153 PrkA AAA domain JE55_RS16810 15964ac82958643626f9ba3d1fc506fc 640 SMART SM00763 19 376 5.1E-211 T 22-04-2016 IPR013153 PrkA AAA domain JE55_RS16810 15964ac82958643626f9ba3d1fc506fc 640 PANTHER PTHR30267:SF2 1 640 3.1E-270 T 22-04-2016 JE55_RS16810 15964ac82958643626f9ba3d1fc506fc 640 PIRSF PIRSF000549 1 640 1.4E-290 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 JE55_RS16810 15964ac82958643626f9ba3d1fc506fc 640 Pfam PF06798 PrkA serine protein kinase C-terminal domain 379 632 3.5E-74 T 22-04-2016 IPR010650 PrkA C-terminal domain JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 PRINTS PR01002 Flagellar protein FlgJ signature 250 271 2.7E-43 T 22-04-2016 JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 PRINTS PR01002 Flagellar protein FlgJ signature 186 204 2.7E-43 T 22-04-2016 JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 PRINTS PR01002 Flagellar protein FlgJ signature 293 311 2.7E-43 T 22-04-2016 JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 PRINTS PR01002 Flagellar protein FlgJ signature 57 77 2.7E-43 T 22-04-2016 JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 PRINTS PR01002 Flagellar protein FlgJ signature 206 227 2.7E-43 T 22-04-2016 JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 PRINTS PR01002 Flagellar protein FlgJ signature 228 249 2.7E-43 T 22-04-2016 JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 PRINTS PR01002 Flagellar protein FlgJ signature 9 29 2.7E-43 T 22-04-2016 JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 15 310 4.5E-101 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 Pfam PF10135 Rod binding protein 54 100 8.9E-18 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 PANTHER PTHR33308 32 310 1.1E-31 T 22-04-2016 JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 PANTHER PTHR33308:SF3 32 310 1.1E-31 T 22-04-2016 JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 SMART SM00047 155 311 7.0E-37 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 JE55_RS09800 321ff163ec3d003930c669e4f768176a 311 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 174 310 2.4E-21 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 JE55_RS09820 15c2d420c1f6cbd453ec482f8425beb7 435 PANTHER PTHR11119 1 430 2.0E-187 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS09820 15c2d420c1f6cbd453ec482f8425beb7 435 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 26 423 2.1E-106 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 JE55_RS09820 15c2d420c1f6cbd453ec482f8425beb7 435 Pfam PF00860 Permease family 31 399 1.2E-91 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS09820 15c2d420c1f6cbd453ec482f8425beb7 435 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 348 368 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 JE55_RS09820 15c2d420c1f6cbd453ec482f8425beb7 435 PANTHER PTHR11119:SF49 1 430 2.0E-187 T 22-04-2016 JE55_RS11460 2a53829df6e30802c0d3ecfe7609883c 429 Pfam PF02563 Polysaccharide biosynthesis/export protein 79 199 3.7E-23 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 JE55_RS11460 2a53829df6e30802c0d3ecfe7609883c 429 Gene3D G3DSA:3.30.1950.10 147 198 4.9E-28 T 22-04-2016 JE55_RS11460 2a53829df6e30802c0d3ecfe7609883c 429 Gene3D G3DSA:3.30.1950.10 87 110 4.9E-28 T 22-04-2016 JE55_RS11460 2a53829df6e30802c0d3ecfe7609883c 429 Gene3D G3DSA:3.10.560.10 279 398 6.4E-27 T 22-04-2016 JE55_RS11460 2a53829df6e30802c0d3ecfe7609883c 429 PANTHER PTHR33619 5 103 9.5E-54 T 22-04-2016 JE55_RS11460 2a53829df6e30802c0d3ecfe7609883c 429 PANTHER PTHR33619 151 348 9.5E-54 T 22-04-2016 JE55_RS11460 2a53829df6e30802c0d3ecfe7609883c 429 PANTHER PTHR33619 364 427 9.5E-54 T 22-04-2016 JE55_RS11460 2a53829df6e30802c0d3ecfe7609883c 429 Gene3D G3DSA:1.20.5.70 400 420 8.2E-4 T 22-04-2016 JE55_RS11460 2a53829df6e30802c0d3ecfe7609883c 429 Pfam PF10531 SLBB domain 206 258 1.3E-10 T 22-04-2016 IPR019554 Soluble ligand binding domain JE55_RS11460 2a53829df6e30802c0d3ecfe7609883c 429 Gene3D G3DSA:3.10.560.10 199 278 3.5E-26 T 22-04-2016 JE55_RS05200 42e4f0e563e430074c9f1793ccf7b522 340 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 330 27.832 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 JE55_RS05200 42e4f0e563e430074c9f1793ccf7b522 340 SUPERFAMILY SSF46785 1 81 5.89E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05200 42e4f0e563e430074c9f1793ccf7b522 340 Gene3D G3DSA:3.30.450.40 177 339 8.4E-41 T 22-04-2016 IPR029016 GAF domain-like JE55_RS05200 42e4f0e563e430074c9f1793ccf7b522 340 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 334 3.5E-94 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 JE55_RS05200 42e4f0e563e430074c9f1793ccf7b522 340 PIRSF PIRSF005485 1 340 3.6E-115 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 JE55_RS05200 42e4f0e563e430074c9f1793ccf7b522 340 SUPERFAMILY SSF55781 71 339 7.45E-61 T 22-04-2016 IPR029016 GAF domain-like JE55_RS05200 42e4f0e563e430074c9f1793ccf7b522 340 PANTHER PTHR34824 1 339 7.4E-95 T 22-04-2016 JE55_RS05200 42e4f0e563e430074c9f1793ccf7b522 340 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2 73 1.5E-6 T 22-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 JE55_RS05200 42e4f0e563e430074c9f1793ccf7b522 340 Pfam PF01628 HrcA protein C terminal domain 106 323 3.9E-58 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 JE55_RS05200 42e4f0e563e430074c9f1793ccf7b522 340 Gene3D G3DSA:1.10.10.10 1 82 3.0E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04875 fcdee809994c525410355c7128576434 77 SUPERFAMILY SSF63592 4 72 4.58E-22 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 JE55_RS04875 fcdee809994c525410355c7128576434 77 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 11 71 3.0E-7 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 JE55_RS04875 fcdee809994c525410355c7128576434 77 Pfam PF05247 Flagellar transcriptional activator (FlhD) 4 71 8.0E-13 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 JE55_RS11185 49f29045f50795a1f7938c93aa43214a 204 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 190 1.6E-44 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related JE55_RS11185 49f29045f50795a1f7938c93aa43214a 204 PANTHER PTHR37481 4 196 6.6E-20 T 22-04-2016 JE55_RS11185 49f29045f50795a1f7938c93aa43214a 204 PANTHER PTHR37481:SF1 4 196 6.6E-20 T 22-04-2016 JE55_RS11185 49f29045f50795a1f7938c93aa43214a 204 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 10 190 2.6E-49 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 397 9.4E-139 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 SUPERFAMILY SSF53901 277 398 7.6E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 Pfam PF00108 Thiolase, N-terminal domain 9 268 5.0E-70 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 Gene3D G3DSA:3.40.47.10 191 282 1.8E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 Gene3D G3DSA:3.40.47.10 7 130 1.8E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 PANTHER PTHR18919 5 399 1.9E-169 T 22-04-2016 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 Gene3D G3DSA:3.40.47.10 283 398 2.3E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 Gene3D G3DSA:3.40.47.10 143 190 2.3E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 Pfam PF02803 Thiolase, C-terminal domain 276 398 1.4E-44 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 SUPERFAMILY SSF53901 5 273 2.35E-71 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 JE55_RS11625 a8f8a1ec92661e1940bfd88dee5dbdad 399 PIRSF PIRSF000429 2 399 8.2E-126 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 JE55_RS13390 64028854903922723999064a2fdc999e 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 249 2.3E-60 T 22-04-2016 JE55_RS13390 64028854903922723999064a2fdc999e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS13390 64028854903922723999064a2fdc999e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS13390 64028854903922723999064a2fdc999e 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS13390 64028854903922723999064a2fdc999e 252 Gene3D G3DSA:3.40.50.720 1 251 3.8E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS13390 64028854903922723999064a2fdc999e 252 PANTHER PTHR24321 1 252 6.0E-44 T 22-04-2016 JE55_RS13390 64028854903922723999064a2fdc999e 252 SUPERFAMILY SSF51735 5 251 2.14E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS13390 64028854903922723999064a2fdc999e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.8E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS13390 64028854903922723999064a2fdc999e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.8E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS13390 64028854903922723999064a2fdc999e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS13390 64028854903922723999064a2fdc999e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.8E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS13390 64028854903922723999064a2fdc999e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.8E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS13390 64028854903922723999064a2fdc999e 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.8E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS13390 64028854903922723999064a2fdc999e 252 PANTHER PTHR24321:SF6 1 252 6.0E-44 T 22-04-2016 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 SUPERFAMILY SSF53850 25 363 8.28E-92 T 22-04-2016 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PANTHER PTHR30222 1 363 2.2E-135 T 22-04-2016 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 3.9E-58 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 176 195 3.9E-58 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 213 232 3.9E-58 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 3.9E-58 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 263 282 3.9E-58 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 3.9E-58 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 122 138 3.9E-58 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 3.9E-58 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 308 334 3.9E-58 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PANTHER PTHR30222:SF11 1 363 2.2E-135 T 22-04-2016 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 PIRSF PIRSF019574 1 364 1.1E-124 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 Gene3D G3DSA:3.40.190.10 146 312 1.6E-58 T 22-04-2016 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 Pfam PF13416 Bacterial extracellular solute-binding protein 41 317 8.7E-31 T 22-04-2016 JE55_RS09140 8bf35521d4be972a05e581b253a936c9 364 Gene3D G3DSA:3.40.190.10 39 145 1.3E-12 T 22-04-2016 JE55_RS05220 d8751499df7c0e4851d35833ec7db28c 1397 PANTHER PTHR38690 19 433 4.6E-109 T 22-04-2016 JE55_RS05220 d8751499df7c0e4851d35833ec7db28c 1397 PANTHER PTHR38690 449 1396 4.6E-109 T 22-04-2016 JE55_RS05220 d8751499df7c0e4851d35833ec7db28c 1397 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 478 1382 5.7E-158 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 JE55_RS05220 d8751499df7c0e4851d35833ec7db28c 1397 Pfam PF13116 Protein of unknown function 586 874 4.5E-42 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 JE55_RS05220 d8751499df7c0e4851d35833ec7db28c 1397 Pfam PF13502 AsmA-like C-terminal region 1121 1377 2.9E-73 T 22-04-2016 IPR032712 AsmA-like, C-terminal JE55_RS15730 f8d8e2554a6bca9fe1932c6f9f169430 181 PANTHER PTHR37089 16 181 4.4E-14 T 22-04-2016 JE55_RS15730 f8d8e2554a6bca9fe1932c6f9f169430 181 Pfam PF05229 Spore Coat Protein U domain 27 178 1.9E-25 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS15730 f8d8e2554a6bca9fe1932c6f9f169430 181 SMART SM00972 120 178 1.5E-13 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 2979 2997 - T 22-04-2016 IPR018511 Hemolysin-type calcium-binding conserved site JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 Gene3D G3DSA:2.60.40.1560 1147 1217 1.1E-5 T 22-04-2016 JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 Gene3D G3DSA:2.60.40.1560 511 586 2.8E-6 T 22-04-2016 JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 Gene3D G3DSA:2.60.40.1560 309 384 4.5E-5 T 22-04-2016 JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 Gene3D G3DSA:2.60.40.1560 829 904 1.2E-5 T 22-04-2016 JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 SMART SM00191 2729 2807 82.0 T 22-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 SMART SM00191 2890 2944 50.0 T 22-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 SMART SM00191 2654 2714 5.7 T 22-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 SMART SM00191 2396 2455 8.4 T 22-04-2016 IPR013519 Integrin alpha beta-propellor Reactome: REACT_13552 JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 SUPERFAMILY SSF69318 2661 2752 5.75E-18 T 22-04-2016 JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 SUPERFAMILY SSF69318 2387 2608 5.75E-18 T 22-04-2016 JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 SUPERFAMILY SSF69318 2661 3019 4.97E-12 T 22-04-2016 JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 Pfam PF12245 Bacterial Ig-like domain (group 3) 1824 1855 0.027 T 22-04-2016 IPR022038 Bacterial Ig-like domain JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 Pfam PF12245 Bacterial Ig-like domain (group 3) 1932 1955 1.6 T 22-04-2016 IPR022038 Bacterial Ig-like domain JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 Pfam PF12245 Bacterial Ig-like domain (group 3) 361 382 0.76 T 22-04-2016 IPR022038 Bacterial Ig-like domain JE55_RS17600 d4e2e99ebdd8cc1626f6b3862ce633a9 3204 Pfam PF12245 Bacterial Ig-like domain (group 3) 2047 2071 0.62 T 22-04-2016 IPR022038 Bacterial Ig-like domain JE55_RS00985 4e46a626f5f39c71c2e89b3c1d706fde 173 SUPERFAMILY SSF158694 7 171 1.28E-56 T 22-04-2016 JE55_RS00985 4e46a626f5f39c71c2e89b3c1d706fde 173 Gene3D G3DSA:1.10.3330.10 13 172 6.3E-63 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 JE55_RS00985 4e46a626f5f39c71c2e89b3c1d706fde 173 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 14 170 2.5E-67 T 22-04-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 JE55_RS00985 4e46a626f5f39c71c2e89b3c1d706fde 173 Pfam PF09349 OHCU decarboxylase 12 167 6.9E-48 T 22-04-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|UniPathway: UPA00394 JE55_RS14490 b4b3f0801edbc13c5cf27b69274b0460 152 PANTHER PTHR13078 1 151 1.7E-35 T 22-04-2016 JE55_RS14490 b4b3f0801edbc13c5cf27b69274b0460 152 SUPERFAMILY SSF54637 2 146 6.23E-35 T 22-04-2016 IPR029069 HotDog domain JE55_RS14490 b4b3f0801edbc13c5cf27b69274b0460 152 Pfam PF01575 MaoC like domain 21 117 4.8E-17 T 22-04-2016 IPR002539 MaoC-like domain JE55_RS14490 b4b3f0801edbc13c5cf27b69274b0460 152 Gene3D G3DSA:3.10.129.10 2 144 3.2E-41 T 22-04-2016 IPR029069 HotDog domain JE55_RS07835 a7fa411d1d2d45d8ccba404e7cc8ab82 226 PANTHER PTHR13343 11 151 7.7E-23 T 22-04-2016 JE55_RS07835 a7fa411d1d2d45d8ccba404e7cc8ab82 226 SUPERFAMILY SSF50475 9 221 1.09E-37 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS07835 a7fa411d1d2d45d8ccba404e7cc8ab82 226 Gene3D G3DSA:2.30.110.10 6 152 8.1E-49 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS07835 a7fa411d1d2d45d8ccba404e7cc8ab82 226 PANTHER PTHR13343:SF4 11 151 7.7E-23 T 22-04-2016 JE55_RS07835 a7fa411d1d2d45d8ccba404e7cc8ab82 226 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 9 150 4.4E-12 T 22-04-2016 JE55_RS12215 7a1f80fc7393273edd5370cefdb8f03c 121 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 39 115 1.3E-13 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 JE55_RS12215 7a1f80fc7393273edd5370cefdb8f03c 121 SUPERFAMILY SSF74653 28 116 3.79E-13 T 22-04-2016 JE55_RS12215 7a1f80fc7393273edd5370cefdb8f03c 121 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 39 114 7.7E-13 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 JE55_RS12215 7a1f80fc7393273edd5370cefdb8f03c 121 Gene3D G3DSA:3.30.1150.10 36 116 4.3E-11 T 22-04-2016 JE55_RS02320 b0e3563dd27554ca1d706be31766936c 154 SUPERFAMILY SSF52821 21 152 3.14E-17 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS02320 b0e3563dd27554ca1d706be31766936c 154 Gene3D G3DSA:3.40.250.10 21 152 8.6E-36 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS02320 b0e3563dd27554ca1d706be31766936c 154 SMART SM00450 27 137 1.1E-5 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS02320 b0e3563dd27554ca1d706be31766936c 154 Pfam PF00581 Rhodanese-like domain 37 131 7.8E-5 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS09020 1bcb726f920b17c9a62e0c6c31713cc9 409 SUPERFAMILY SSF56349 103 381 9.12E-63 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS09020 1bcb726f920b17c9a62e0c6c31713cc9 409 Gene3D G3DSA:1.10.150.130 103 198 5.2E-21 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal JE55_RS09020 1bcb726f920b17c9a62e0c6c31713cc9 409 PANTHER PTHR30629 2 392 5.5E-99 T 22-04-2016 JE55_RS09020 1bcb726f920b17c9a62e0c6c31713cc9 409 Pfam PF00589 Phage integrase family 210 373 2.2E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS09020 1bcb726f920b17c9a62e0c6c31713cc9 409 Gene3D G3DSA:1.10.443.10 209 380 4.6E-28 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS09020 1bcb726f920b17c9a62e0c6c31713cc9 409 Pfam PF13356 Domain of unknown function (DUF4102) 8 92 7.9E-19 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 JE55_RS09020 1bcb726f920b17c9a62e0c6c31713cc9 409 PANTHER PTHR30629:SF2 2 392 5.5E-99 T 22-04-2016 JE55_RS13275 26327439cc3a47bee9220c83849f963d 337 Gene3D G3DSA:3.40.50.150 94 336 1.2E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS13275 26327439cc3a47bee9220c83849f963d 337 SUPERFAMILY SSF46785 13 89 2.72E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13275 26327439cc3a47bee9220c83849f963d 337 Gene3D G3DSA:1.10.10.10 16 85 1.5E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13275 26327439cc3a47bee9220c83849f963d 337 PANTHER PTHR11746 25 332 9.5E-30 T 22-04-2016 JE55_RS13275 26327439cc3a47bee9220c83849f963d 337 SUPERFAMILY SSF53335 110 332 9.51E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS13275 26327439cc3a47bee9220c83849f963d 337 Pfam PF00891 O-methyltransferase 125 321 1.2E-35 T 22-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 JE55_RS13275 26327439cc3a47bee9220c83849f963d 337 PANTHER PTHR11746:SF104 25 332 9.5E-30 T 22-04-2016 JE55_RS00050 a7385816d2f4f3fe917c6ffaace24958 604 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 75 601 3.0E-216 T 22-04-2016 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00917 JE55_RS00050 a7385816d2f4f3fe917c6ffaace24958 604 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 109 275 1.8E-69 T 22-04-2016 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- JE55_RS00050 a7385816d2f4f3fe917c6ffaace24958 604 PANTHER PTHR36837 106 603 1.6E-193 T 22-04-2016 JE55_RS00050 a7385816d2f4f3fe917c6ffaace24958 604 SUPERFAMILY SSF53474 219 528 1.39E-38 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS00050 a7385816d2f4f3fe917c6ffaace24958 604 PANTHER PTHR36837:SF2 106 603 1.6E-193 T 22-04-2016 JE55_RS00050 a7385816d2f4f3fe917c6ffaace24958 604 Gene3D G3DSA:3.40.50.1820 203 572 1.0E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS08450 b7f9500cb0431e112ef48c08a7bc1b6f 283 PANTHER PTHR11410 37 118 1.5E-69 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 JE55_RS08450 b7f9500cb0431e112ef48c08a7bc1b6f 283 PANTHER PTHR11410 137 283 1.5E-69 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 JE55_RS08450 b7f9500cb0431e112ef48c08a7bc1b6f 283 ProSitePatterns PS00449 ATP synthase a subunit signature. 206 215 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site JE55_RS08450 b7f9500cb0431e112ef48c08a7bc1b6f 283 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 29 278 6.8E-38 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 JE55_RS08450 b7f9500cb0431e112ef48c08a7bc1b6f 283 Gene3D G3DSA:1.20.120.220 93 283 4.2E-46 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 JE55_RS08450 b7f9500cb0431e112ef48c08a7bc1b6f 283 SUPERFAMILY SSF81336 92 276 1.57E-36 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 JE55_RS08450 b7f9500cb0431e112ef48c08a7bc1b6f 283 Pfam PF00119 ATP synthase A chain 43 276 7.2E-53 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 JE55_RS08450 b7f9500cb0431e112ef48c08a7bc1b6f 283 PANTHER PTHR11410:SF7 37 118 1.5E-69 T 22-04-2016 JE55_RS08450 b7f9500cb0431e112ef48c08a7bc1b6f 283 PANTHER PTHR11410:SF7 137 283 1.5E-69 T 22-04-2016 JE55_RS08450 b7f9500cb0431e112ef48c08a7bc1b6f 283 Hamap MF_01393 ATP synthase subunit a [atpB]. 16 283 14.165 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 JE55_RS02300 982ae8dd137dcc97fe9ee1ae49174af9 258 Gene3D G3DSA:3.60.10.10 1 257 5.0E-87 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS02300 982ae8dd137dcc97fe9ee1ae49174af9 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 250 3.5E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS02300 982ae8dd137dcc97fe9ee1ae49174af9 258 PANTHER PTHR22748 1 257 3.4E-109 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 JE55_RS02300 982ae8dd137dcc97fe9ee1ae49174af9 258 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 214 225 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 JE55_RS02300 982ae8dd137dcc97fe9ee1ae49174af9 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 257 1.4E-82 T 22-04-2016 JE55_RS02300 982ae8dd137dcc97fe9ee1ae49174af9 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 257 3.9E-80 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 JE55_RS02300 982ae8dd137dcc97fe9ee1ae49174af9 258 SUPERFAMILY SSF56219 1 257 1.57E-81 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS02300 982ae8dd137dcc97fe9ee1ae49174af9 258 PANTHER PTHR22748:SF7 1 257 3.4E-109 T 22-04-2016 JE55_RS18110 8397f7f85dad95aab61e29289aed97f1 206 Gene3D G3DSA:1.10.357.10 7 196 8.2E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS18110 8397f7f85dad95aab61e29289aed97f1 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 2.4E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS18110 8397f7f85dad95aab61e29289aed97f1 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 2.4E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS18110 8397f7f85dad95aab61e29289aed97f1 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 9.0E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS18110 8397f7f85dad95aab61e29289aed97f1 206 SUPERFAMILY SSF46689 5 86 1.95E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS18110 8397f7f85dad95aab61e29289aed97f1 206 Pfam PF13977 Bacterial transcriptional repressor 87 199 2.9E-6 T 22-04-2016 JE55_RS18110 8397f7f85dad95aab61e29289aed97f1 206 PANTHER PTHR30055 2 206 6.7E-25 T 22-04-2016 JE55_RS18110 8397f7f85dad95aab61e29289aed97f1 206 SUPERFAMILY SSF48498 85 198 8.67E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS04810 88d7689604752a0897a58c5164ff2948 186 Pfam PF12019 Type II transport protein GspH 49 173 2.5E-13 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 JE55_RS04810 88d7689604752a0897a58c5164ff2948 186 SUPERFAMILY SSF54523 13 141 2.43E-11 T 22-04-2016 JE55_RS28290 fb2e8b33a8cb1867251a0cf4e498a8ca 223 SUPERFAMILY SSF116726 129 211 7.32E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JE55_RS28290 fb2e8b33a8cb1867251a0cf4e498a8ca 223 Pfam PF02080 TrkA-C domain 145 212 1.3E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JE55_RS28290 fb2e8b33a8cb1867251a0cf4e498a8ca 223 SUPERFAMILY SSF51735 2 108 2.07E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS28290 fb2e8b33a8cb1867251a0cf4e498a8ca 223 PANTHER PTHR16254:SF6 1 124 5.5E-18 T 22-04-2016 JE55_RS28290 fb2e8b33a8cb1867251a0cf4e498a8ca 223 Gene3D G3DSA:3.30.70.1450 140 212 1.2E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 JE55_RS28290 fb2e8b33a8cb1867251a0cf4e498a8ca 223 Gene3D G3DSA:3.40.50.720 1 98 2.0E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS28290 fb2e8b33a8cb1867251a0cf4e498a8ca 223 Pfam PF02254 TrkA-N domain 2 83 2.0E-11 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JE55_RS28290 fb2e8b33a8cb1867251a0cf4e498a8ca 223 PANTHER PTHR16254 1 124 5.5E-18 T 22-04-2016 JE55_RS05690 c9e4528ae3f46e480dafb312325f39e0 241 SUPERFAMILY SSF52540 1 235 2.42E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05690 c9e4528ae3f46e480dafb312325f39e0 241 SMART SM00382 26 213 2.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS05690 c9e4528ae3f46e480dafb312325f39e0 241 Pfam PF00005 ABC transporter 18 165 6.1E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS05690 c9e4528ae3f46e480dafb312325f39e0 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS05690 c9e4528ae3f46e480dafb312325f39e0 241 Gene3D G3DSA:3.40.50.300 1 236 7.5E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05690 c9e4528ae3f46e480dafb312325f39e0 241 PANTHER PTHR24220 3 240 6.4E-183 T 22-04-2016 JE55_RS05690 c9e4528ae3f46e480dafb312325f39e0 241 PANTHER PTHR24220:SF317 3 240 6.4E-183 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 JE55_RS05690 c9e4528ae3f46e480dafb312325f39e0 241 PIRSF PIRSF039085 1 241 5.6E-105 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 JE55_RS02495 66ac4bf8cc531197b2eeb2e4fb2cf499 762 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 281 726 5.0E-66 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS02495 66ac4bf8cc531197b2eeb2e4fb2cf499 762 SUPERFAMILY SSF81442 276 746 1.14E-73 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS11600 ebae5a2325822a71d277bcf0c903aed7 158 Pfam PF00293 NUDIX domain 9 141 4.5E-11 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 JE55_RS11600 ebae5a2325822a71d277bcf0c903aed7 158 SUPERFAMILY SSF55811 3 155 5.15E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS11600 ebae5a2325822a71d277bcf0c903aed7 158 PRINTS PR01404 DATP pyrophosphohydrolase signature 133 146 7.7E-7 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 JE55_RS11600 ebae5a2325822a71d277bcf0c903aed7 158 PRINTS PR01404 DATP pyrophosphohydrolase signature 21 42 7.7E-7 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 JE55_RS11600 ebae5a2325822a71d277bcf0c903aed7 158 PANTHER PTHR22769:SF28 6 146 4.6E-23 T 22-04-2016 JE55_RS11600 ebae5a2325822a71d277bcf0c903aed7 158 PANTHER PTHR22769 6 146 4.6E-23 T 22-04-2016 JE55_RS11600 ebae5a2325822a71d277bcf0c903aed7 158 Gene3D G3DSA:3.90.79.10 4 153 3.9E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS13835 71305cd900121faf709feaf6b93bcd84 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 1.3E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS13835 71305cd900121faf709feaf6b93bcd84 210 PANTHER PTHR30328 2 207 1.1E-56 T 22-04-2016 JE55_RS13835 71305cd900121faf709feaf6b93bcd84 210 Gene3D G3DSA:1.10.357.10 64 205 6.5E-41 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 JE55_RS13835 71305cd900121faf709feaf6b93bcd84 210 SUPERFAMILY SSF46689 4 85 1.69E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS13835 71305cd900121faf709feaf6b93bcd84 210 Gene3D G3DSA:1.10.10.60 4 63 1.1E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS13835 71305cd900121faf709feaf6b93bcd84 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 3.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS13835 71305cd900121faf709feaf6b93bcd84 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 3.4E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 JE55_RS13835 71305cd900121faf709feaf6b93bcd84 210 SUPERFAMILY SSF48498 84 208 2.55E-34 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS13835 71305cd900121faf709feaf6b93bcd84 210 PANTHER PTHR30328:SF16 2 207 1.1E-56 T 22-04-2016 JE55_RS13835 71305cd900121faf709feaf6b93bcd84 210 Pfam PF14514 Transcriptional regulator, TetR, C-terminal 85 203 4.6E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal JE55_RS08255 c3b85b15668afd48d52a8271965111a9 355 SUPERFAMILY SSF53756 81 318 2.76E-18 T 22-04-2016 JE55_RS08255 c3b85b15668afd48d52a8271965111a9 355 Gene3D G3DSA:3.40.50.2000 201 316 8.2E-13 T 22-04-2016 JE55_RS08145 237a6c415241afaccb91d4aee5a231bd 214 PANTHER PTHR34823:SF1 66 213 1.9E-24 T 22-04-2016 JE55_RS08145 237a6c415241afaccb91d4aee5a231bd 214 Gene3D G3DSA:2.70.50.50 19 213 1.0E-44 T 22-04-2016 JE55_RS08145 237a6c415241afaccb91d4aee5a231bd 214 PANTHER PTHR34823 66 213 1.9E-24 T 22-04-2016 JE55_RS08145 237a6c415241afaccb91d4aee5a231bd 214 SUPERFAMILY SSF81296 19 213 1.82E-39 T 22-04-2016 IPR014756 Immunoglobulin E-set JE55_RS08145 237a6c415241afaccb91d4aee5a231bd 214 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 19 211 6.7E-33 T 22-04-2016 IPR004302 Chitin-binding protein, N-terminal JE55_RS00295 f7ffcc3a5b068ad151b5892e0057ec89 202 Pfam PF12836 Helix-hairpin-helix motif 23 79 1.4E-14 T 22-04-2016 JE55_RS00295 f7ffcc3a5b068ad151b5892e0057ec89 202 SUPERFAMILY SSF47781 20 89 9.12E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 JE55_RS00295 f7ffcc3a5b068ad151b5892e0057ec89 202 PANTHER PTHR21180 24 77 2.0E-12 T 22-04-2016 JE55_RS00295 f7ffcc3a5b068ad151b5892e0057ec89 202 Gene3D G3DSA:1.10.150.280 17 82 2.9E-18 T 22-04-2016 JE55_RS01175 72fb6553d81db669cca03cab1ef5d7ef 260 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 242 3.8E-80 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 JE55_RS01175 72fb6553d81db669cca03cab1ef5d7ef 260 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 188 205 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 JE55_RS01175 72fb6553d81db669cca03cab1ef5d7ef 260 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 16 242 5.5E-89 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 JE55_RS01175 72fb6553d81db669cca03cab1ef5d7ef 260 SUPERFAMILY SSF64005 12 237 1.44E-86 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 JE55_RS01175 72fb6553d81db669cca03cab1ef5d7ef 260 Gene3D G3DSA:3.40.1180.10 8 249 1.2E-98 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 JE55_RS01175 72fb6553d81db669cca03cab1ef5d7ef 260 PANTHER PTHR10291 8 255 6.5E-119 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 JE55_RS01175 72fb6553d81db669cca03cab1ef5d7ef 260 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 243 40.443 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 JE55_RS10905 e0ae62846d50723553d2f52089d05c49 346 SUPERFAMILY SSF53901 177 315 6.97E-12 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10905 e0ae62846d50723553d2f52089d05c49 346 SUPERFAMILY SSF53901 3 193 7.97E-17 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10905 e0ae62846d50723553d2f52089d05c49 346 Gene3D G3DSA:3.40.47.10 69 185 3.7E-10 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS10905 e0ae62846d50723553d2f52089d05c49 346 Gene3D G3DSA:3.40.47.10 186 311 2.1E-11 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS13765 dbabf9ac42fe2ec0aed578ffa3c50f0d 309 Gene3D G3DSA:3.40.50.150 64 301 5.3E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS13765 dbabf9ac42fe2ec0aed578ffa3c50f0d 309 SUPERFAMILY SSF53335 69 285 1.02E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS07010 8c6a2a8067e761b8c99e9d05d68e970f 218 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 149 170 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 JE55_RS07010 8c6a2a8067e761b8c99e9d05d68e970f 218 PANTHER PTHR21403 1 212 2.2E-84 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 JE55_RS07010 8c6a2a8067e761b8c99e9d05d68e970f 218 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 214 56.085 T 22-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 JE55_RS07010 8c6a2a8067e761b8c99e9d05d68e970f 218 Pfam PF01634 ATP phosphoribosyltransferase 54 207 7.4E-49 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 JE55_RS07010 8c6a2a8067e761b8c99e9d05d68e970f 218 PANTHER PTHR21403:SF3 1 212 2.2E-84 T 22-04-2016 JE55_RS07010 8c6a2a8067e761b8c99e9d05d68e970f 218 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 190 7.1E-59 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 JE55_RS07010 8c6a2a8067e761b8c99e9d05d68e970f 218 SUPERFAMILY SSF53850 5 210 1.48E-65 T 22-04-2016 JE55_RS07010 8c6a2a8067e761b8c99e9d05d68e970f 218 Gene3D G3DSA:3.40.190.10 4 148 2.1E-43 T 22-04-2016 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 PRINTS PR00045 Sigma-54 factor signature 418 429 5.5E-27 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 PRINTS PR00045 Sigma-54 factor signature 402 414 5.5E-27 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 PRINTS PR00045 Sigma-54 factor signature 213 230 5.5E-27 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 PRINTS PR00045 Sigma-54 factor signature 476 494 5.5E-27 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 390 409 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 PANTHER PTHR32248 1 80 2.8E-149 T 22-04-2016 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 PANTHER PTHR32248 97 502 2.8E-149 T 22-04-2016 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 7.4E-15 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 481 488 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 Pfam PF04552 Sigma-54, DNA binding domain 345 500 5.6E-66 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 500 2.2E-143 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 PANTHER PTHR32248:SF4 1 80 2.8E-149 T 22-04-2016 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 PANTHER PTHR32248:SF4 97 502 2.8E-149 T 22-04-2016 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 Pfam PF04963 Sigma-54 factor, core binding domain 138 329 4.3E-59 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 JE55_RS11170 6fba145a0c723931095e2e6a7c20ebf8 502 PIRSF PIRSF000774 1 502 1.6E-155 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 JE55_RS17555 ecf2867e379e2b5982b47757437612a8 237 SUPERFAMILY SSF46894 128 225 5.39E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS17555 ecf2867e379e2b5982b47757437612a8 237 Gene3D G3DSA:1.10.10.10 126 225 4.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17555 ecf2867e379e2b5982b47757437612a8 237 SMART SM00862 147 224 4.5E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS17555 ecf2867e379e2b5982b47757437612a8 237 PANTHER PTHR26402 1 225 4.2E-56 T 22-04-2016 JE55_RS17555 ecf2867e379e2b5982b47757437612a8 237 Pfam PF00072 Response regulator receiver domain 3 112 2.0E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS17555 ecf2867e379e2b5982b47757437612a8 237 PANTHER PTHR26402:SF316 1 225 4.2E-56 T 22-04-2016 JE55_RS17555 ecf2867e379e2b5982b47757437612a8 237 Gene3D G3DSA:3.40.50.2300 3 125 5.5E-33 T 22-04-2016 JE55_RS17555 ecf2867e379e2b5982b47757437612a8 237 SMART SM00448 1 112 2.6E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS17555 ecf2867e379e2b5982b47757437612a8 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 3.1E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS17555 ecf2867e379e2b5982b47757437612a8 237 SUPERFAMILY SSF52172 3 130 8.54E-34 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS04925 0590770839d718f253bc08c1b7e3e925 414 Pfam PF13440 Polysaccharide biosynthesis protein 175 320 1.3E-7 T 22-04-2016 JE55_RS00680 2793dc9fd5bb374926c5662ae50b5f7b 238 SUPERFAMILY SSF52540 8 232 4.13E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00680 2793dc9fd5bb374926c5662ae50b5f7b 238 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS00680 2793dc9fd5bb374926c5662ae50b5f7b 238 Gene3D G3DSA:3.40.50.300 7 228 9.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00680 2793dc9fd5bb374926c5662ae50b5f7b 238 Pfam PF00005 ABC transporter 29 177 1.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS00680 2793dc9fd5bb374926c5662ae50b5f7b 238 SMART SM00382 37 228 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS00680 2793dc9fd5bb374926c5662ae50b5f7b 238 PANTHER PTHR24220 10 227 1.1E-95 T 22-04-2016 JE55_RS00680 2793dc9fd5bb374926c5662ae50b5f7b 238 PANTHER PTHR24220:SF509 10 227 1.1E-95 T 22-04-2016 JE55_RS17900 be513d57c27848369710fa01ac1958da 352 SUPERFAMILY SSF143631 31 337 2.01E-68 T 22-04-2016 IPR003374 ApbE-like domain JE55_RS17900 be513d57c27848369710fa01ac1958da 352 PANTHER PTHR30040:SF2 11 346 3.0E-63 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 JE55_RS17900 be513d57c27848369710fa01ac1958da 352 PIRSF PIRSF006268 4 343 1.2E-72 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 JE55_RS17900 be513d57c27848369710fa01ac1958da 352 PANTHER PTHR30040 11 346 3.0E-63 T 22-04-2016 JE55_RS17900 be513d57c27848369710fa01ac1958da 352 Pfam PF02424 ApbE family 39 320 5.8E-67 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 JE55_RS17810 dec9a754c9190f381afadcccf631f05e 155 SUPERFAMILY SSF55785 38 132 2.62E-10 T 22-04-2016 IPR000014 PAS domain JE55_RS17810 dec9a754c9190f381afadcccf631f05e 155 Gene3D G3DSA:3.30.450.20 39 127 8.0E-9 T 22-04-2016 JE55_RS17810 dec9a754c9190f381afadcccf631f05e 155 Pfam PF08670 MEKHLA domain 8 147 6.1E-50 T 22-04-2016 IPR013978 MEKHLA JE55_RS11850 1c90c7ebc93802fd7ad7e6f6c3496369 277 Gene3D G3DSA:1.10.620.20 22 188 5.2E-13 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 JE55_RS11850 1c90c7ebc93802fd7ad7e6f6c3496369 277 SUPERFAMILY SSF47240 11 192 9.33E-41 T 22-04-2016 IPR009078 Ferritin-like superfamily JE55_RS12445 2017ebb74b3610e8e27a61590b0fa240 314 Gene3D G3DSA:1.10.3720.10 24 300 3.5E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS12445 2017ebb74b3610e8e27a61590b0fa240 314 PANTHER PTHR30193:SF28 23 314 5.5E-117 T 22-04-2016 JE55_RS12445 2017ebb74b3610e8e27a61590b0fa240 314 PANTHER PTHR30193 23 314 5.5E-117 T 22-04-2016 JE55_RS12445 2017ebb74b3610e8e27a61590b0fa240 314 SUPERFAMILY SSF161098 73 298 1.7E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS12445 2017ebb74b3610e8e27a61590b0fa240 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 309 4.2E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS12705 4808d2fec93d17cf663119e7174bcfac 460 Pfam PF02601 Exonuclease VII, large subunit 136 447 7.0E-93 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 JE55_RS12705 4808d2fec93d17cf663119e7174bcfac 460 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 17 450 27.582 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 JE55_RS12705 4808d2fec93d17cf663119e7174bcfac 460 Pfam PF13742 OB-fold nucleic acid binding domain 21 112 7.4E-29 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 JE55_RS12705 4808d2fec93d17cf663119e7174bcfac 460 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 22 361 1.6E-124 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 JE55_RS12705 4808d2fec93d17cf663119e7174bcfac 460 PANTHER PTHR30008 12 460 3.9E-149 T 22-04-2016 JE55_RS12705 4808d2fec93d17cf663119e7174bcfac 460 PANTHER PTHR30008:SF0 12 460 3.9E-149 T 22-04-2016 JE55_RS01140 b2c50e6f7d0452f26ad75eba6418f789 155 Gene3D G3DSA:3.10.129.10 3 148 1.2E-56 T 22-04-2016 IPR029069 HotDog domain JE55_RS01140 b2c50e6f7d0452f26ad75eba6418f789 155 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 147 1.0E-60 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 JE55_RS01140 b2c50e6f7d0452f26ad75eba6418f789 155 SUPERFAMILY SSF54637 10 150 1.81E-47 T 22-04-2016 IPR029069 HotDog domain JE55_RS01140 b2c50e6f7d0452f26ad75eba6418f789 155 Pfam PF07977 FabA-like domain 17 143 4.0E-37 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 JE55_RS01140 b2c50e6f7d0452f26ad75eba6418f789 155 PANTHER PTHR30272 8 152 6.4E-73 T 22-04-2016 JE55_RS01140 b2c50e6f7d0452f26ad75eba6418f789 155 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 150 35.875 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 JE55_RS16965 63b88aa623017c53d7387b3eb2cb1e68 811 SUPERFAMILY SSF141729 11 129 3.92E-31 T 22-04-2016 JE55_RS16965 63b88aa623017c53d7387b3eb2cb1e68 811 Pfam PF00577 Outer membrane usher protein 174 717 5.6E-141 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16965 63b88aa623017c53d7387b3eb2cb1e68 811 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 289 299 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site JE55_RS16965 63b88aa623017c53d7387b3eb2cb1e68 811 PANTHER PTHR30451:SF4 8 775 1.1E-189 T 22-04-2016 JE55_RS16965 63b88aa623017c53d7387b3eb2cb1e68 811 PANTHER PTHR30451 8 775 1.1E-189 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 JE55_RS16965 63b88aa623017c53d7387b3eb2cb1e68 811 Pfam PF13954 PapC N-terminal domain 12 154 2.9E-36 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 JE55_RS16965 63b88aa623017c53d7387b3eb2cb1e68 811 Pfam PF13953 PapC C-terminal domain 726 782 8.4E-13 T 22-04-2016 IPR025949 PapC-like, C-terminal domain JE55_RS04605 8a2d35b86d98992ba26091f722c94c14 212 Gene3D G3DSA:3.40.30.10 12 187 9.6E-41 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS04605 8a2d35b86d98992ba26091f722c94c14 212 PIRSF PIRSF006386 6 198 8.6E-33 T 22-04-2016 IPR014440 HCCA isomerase/glutathione S-transferase kappa JE55_RS04605 8a2d35b86d98992ba26091f722c94c14 212 SUPERFAMILY SSF52833 12 187 5.03E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS04605 8a2d35b86d98992ba26091f722c94c14 212 PANTHER PTHR13887 13 188 3.3E-22 T 22-04-2016 JE55_RS04605 8a2d35b86d98992ba26091f722c94c14 212 Pfam PF01323 DSBA-like thioredoxin domain 13 186 1.2E-23 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 JE55_RS15035 df57aa64e37ab61da034c1e3180af590 133 PANTHER PTHR11527 28 133 8.5E-22 T 22-04-2016 IPR031107 Small heat shock protein HSP20 JE55_RS15035 df57aa64e37ab61da034c1e3180af590 133 PANTHER PTHR11527:SF118 28 133 8.5E-22 T 22-04-2016 JE55_RS15035 df57aa64e37ab61da034c1e3180af590 133 Pfam PF00011 Hsp20/alpha crystallin family 34 133 2.1E-17 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain JE55_RS15035 df57aa64e37ab61da034c1e3180af590 133 SUPERFAMILY SSF49764 25 132 6.02E-27 T 22-04-2016 IPR008978 HSP20-like chaperone JE55_RS15035 df57aa64e37ab61da034c1e3180af590 133 Gene3D G3DSA:2.60.40.790 21 133 2.7E-24 T 22-04-2016 IPR008978 HSP20-like chaperone JE55_RS03325 63d77b9a8a11d62619a53de4833c8b58 468 PANTHER PTHR11206:SF153 26 457 6.9E-93 T 22-04-2016 JE55_RS03325 63d77b9a8a11d62619a53de4833c8b58 468 PIRSF PIRSF006603 23 465 1.2E-61 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 JE55_RS03325 63d77b9a8a11d62619a53de4833c8b58 468 PANTHER PTHR11206 26 457 6.9E-93 T 22-04-2016 JE55_RS03325 63d77b9a8a11d62619a53de4833c8b58 468 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 433 4.1E-70 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 JE55_RS03325 63d77b9a8a11d62619a53de4833c8b58 468 Pfam PF01554 MatE 254 420 1.1E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 JE55_RS03325 63d77b9a8a11d62619a53de4833c8b58 468 Pfam PF01554 MatE 30 189 5.1E-22 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 JE55_RS12610 3e9de9afa3f53aa11dc6655c561bda64 184 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 27 169 3.8E-35 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 JE55_RS12610 3e9de9afa3f53aa11dc6655c561bda64 184 Gene3D G3DSA:3.40.50.300 21 183 8.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12610 3e9de9afa3f53aa11dc6655c561bda64 184 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 26 159 4.2E-37 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 JE55_RS12610 3e9de9afa3f53aa11dc6655c561bda64 184 PANTHER PTHR33540 20 183 1.4E-35 T 22-04-2016 JE55_RS12610 3e9de9afa3f53aa11dc6655c561bda64 184 SUPERFAMILY SSF52540 56 166 6.66E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08315 922326325adb3db7aa92259e324f7664 137 Pfam PF12773 Double zinc ribbon 85 129 1.2E-9 T 22-04-2016 IPR025874 Double zinc ribbon JE55_RS24245 c0f93587921731dfe8c9b5fe82245134 172 Pfam PF05299 M61 glycyl aminopeptidase 1 68 1.2E-18 T 22-04-2016 IPR007963 Peptidase M61, catalytic domain JE55_RS16960 5dd1f9be2b952fa12edc0a1420fe901f 170 Gene3D G3DSA:2.60.40.1090 24 170 3.4E-42 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 JE55_RS16960 5dd1f9be2b952fa12edc0a1420fe901f 170 Pfam PF00419 Fimbrial protein 27 170 1.6E-20 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 JE55_RS16960 5dd1f9be2b952fa12edc0a1420fe901f 170 PANTHER PTHR33420 1 170 1.0E-43 T 22-04-2016 JE55_RS16960 5dd1f9be2b952fa12edc0a1420fe901f 170 SUPERFAMILY SSF49401 25 170 3.53E-37 T 22-04-2016 IPR008966 Adhesion domain JE55_RS10665 40d53fab74a1d630c99e7b26d356a064 157 SUPERFAMILY SSF53062 1 125 1.03E-28 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 JE55_RS10665 40d53fab74a1d630c99e7b26d356a064 157 Gene3D G3DSA:3.40.50.510 1 126 3.0E-36 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 JE55_RS10665 40d53fab74a1d630c99e7b26d356a064 157 Pfam PF03610 PTS system fructose IIA component 3 106 7.8E-16 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 JE55_RS10665 40d53fab74a1d630c99e7b26d356a064 157 PANTHER PTHR33799 2 139 3.2E-21 T 22-04-2016 JE55_RS00185 585c3235ce580de9749a27badd4e9c1c 286 SUPERFAMILY SSF56219 1 283 1.56E-34 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS00185 585c3235ce580de9749a27badd4e9c1c 286 Gene3D G3DSA:3.60.10.10 1 283 2.2E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS00185 585c3235ce580de9749a27badd4e9c1c 286 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 276 3.2E-16 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 SUPERFAMILY SSF82714 182 271 2.49E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 SUPERFAMILY SSF82866 837 1026 7.46E-44 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 SUPERFAMILY SSF82693 38 132 1.31E-26 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 SUPERFAMILY SSF82693 566 671 1.94E-28 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 SUPERFAMILY SSF82714 723 811 3.27E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 SUPERFAMILY SSF82693 274 330 6.28E-25 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 Gene3D G3DSA:3.30.70.1430 38 139 8.2E-34 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1046 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 SUPERFAMILY SSF82693 135 182 6.28E-25 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 PANTHER PTHR32063:SF13 1 1041 0.0 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 Gene3D G3DSA:3.30.2090.10 181 274 2.2E-25 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 Gene3D G3DSA:3.30.2090.10 722 812 2.5E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 PANTHER PTHR32063 1 1041 0.0 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 SUPERFAMILY SSF82866 297 497 4.45E-48 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 SUPERFAMILY SSF82693 810 858 2.04E-27 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 SUPERFAMILY SSF82693 673 722 2.04E-27 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.6E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.6E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.6E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.6E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.6E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.6E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.6E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.6E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.6E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 Gene3D G3DSA:3.30.70.1430 568 671 2.7E-33 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 Gene3D G3DSA:1.10.3850.10 280 498 3.7E-58 T 22-04-2016 JE55_RS12365 c31521a75b9c73f0ccd381b83f798dfd 1066 Gene3D G3DSA:1.10.3850.10 816 1027 3.1E-52 T 22-04-2016 JE55_RS06440 c1880c2bf36a9bb7cdfe530325ddb40d 228 PIRSF PIRSF001461 1 227 1.8E-103 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 JE55_RS06440 c1880c2bf36a9bb7cdfe530325ddb40d 228 PANTHER PTHR11749 3 223 9.8E-122 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 JE55_RS06440 c1880c2bf36a9bb7cdfe530325ddb40d 228 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 JE55_RS06440 c1880c2bf36a9bb7cdfe530325ddb40d 228 SUPERFAMILY SSF51366 4 221 3.9E-74 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 JE55_RS06440 c1880c2bf36a9bb7cdfe530325ddb40d 228 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 219 2.8E-96 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 JE55_RS06440 c1880c2bf36a9bb7cdfe530325ddb40d 228 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 JE55_RS06440 c1880c2bf36a9bb7cdfe530325ddb40d 228 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 206 1.9E-90 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 JE55_RS06440 c1880c2bf36a9bb7cdfe530325ddb40d 228 Gene3D G3DSA:3.20.20.70 2 223 1.2E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS08760 2cd0c66c7d5b5c01516540dfb86cfd1a 90 PANTHER PTHR34040:SF2 1 89 3.4E-32 T 22-04-2016 JE55_RS08760 2cd0c66c7d5b5c01516540dfb86cfd1a 90 PIRSF PIRSF004669 1 88 1.1E-31 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JE55_RS08760 2cd0c66c7d5b5c01516540dfb86cfd1a 90 Pfam PF01313 Bacterial export proteins, family 3 6 77 4.8E-32 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JE55_RS08760 2cd0c66c7d5b5c01516540dfb86cfd1a 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.2E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JE55_RS08760 2cd0c66c7d5b5c01516540dfb86cfd1a 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.2E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JE55_RS08760 2cd0c66c7d5b5c01516540dfb86cfd1a 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.2E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 JE55_RS08760 2cd0c66c7d5b5c01516540dfb86cfd1a 90 PANTHER PTHR34040 1 89 3.4E-32 T 22-04-2016 JE55_RS08760 2cd0c66c7d5b5c01516540dfb86cfd1a 90 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 85 2.2E-30 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 Pfam PF00155 Aminotransferase class I and II 174 451 8.6E-27 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.5E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.5E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 SUPERFAMILY SSF53383 127 481 3.71E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 Gene3D G3DSA:3.90.1150.10 369 447 4.9E-7 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 81 1.4E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 PANTHER PTHR11751:SF10 107 483 2.7E-100 T 22-04-2016 JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 SMART SM00345 25 84 7.3E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 Gene3D G3DSA:3.40.640.10 168 368 1.4E-45 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 SUPERFAMILY SSF46785 13 93 1.89E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 Gene3D G3DSA:1.10.10.10 16 87 4.8E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15425 acf44c52a77751d65eca2e358a5a9d98 486 PANTHER PTHR11751 107 483 2.7E-100 T 22-04-2016 JE55_RS09415 5247d0af5b0196e8931078fd4e54fbde 138 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 101 125 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site JE55_RS09415 5247d0af5b0196e8931078fd4e54fbde 138 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 16 137 28.241 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 JE55_RS09415 5247d0af5b0196e8931078fd4e54fbde 138 SUPERFAMILY SSF57716 98 136 2.28E-8 T 22-04-2016 JE55_RS09415 5247d0af5b0196e8931078fd4e54fbde 138 PANTHER PTHR33823:SF2 2 134 1.1E-35 T 22-04-2016 JE55_RS09415 5247d0af5b0196e8931078fd4e54fbde 138 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 20 128 8.6E-43 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 JE55_RS09415 5247d0af5b0196e8931078fd4e54fbde 138 PANTHER PTHR33823 2 134 1.1E-35 T 22-04-2016 JE55_RS09415 5247d0af5b0196e8931078fd4e54fbde 138 SUPERFAMILY SSF109635 5 97 2.09E-29 T 22-04-2016 JE55_RS09415 5247d0af5b0196e8931078fd4e54fbde 138 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 96 130 5.5E-11 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 JE55_RS16700 7168a19f8dc68c86cde399c15fa933d5 158 Pfam PF01638 HxlR-like helix-turn-helix 19 105 2.2E-23 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type JE55_RS16700 7168a19f8dc68c86cde399c15fa933d5 158 PANTHER PTHR33204:SF14 1 149 4.5E-78 T 22-04-2016 JE55_RS16700 7168a19f8dc68c86cde399c15fa933d5 158 PANTHER PTHR33204 1 149 4.5E-78 T 22-04-2016 JE55_RS16700 7168a19f8dc68c86cde399c15fa933d5 158 Gene3D G3DSA:1.10.10.10 3 106 2.0E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16700 7168a19f8dc68c86cde399c15fa933d5 158 SUPERFAMILY SSF46785 6 144 1.18E-41 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13465 0f3021b70f612486ca252f84d820eb8c 181 Pfam PF13801 Heavy-metal resistance 8 140 1.1E-13 T 22-04-2016 IPR025961 Heavy-metal resistance protein JE55_RS14360 a6899d3ef61957d55e30a7a987dbd1d5 425 Gene3D G3DSA:3.40.50.2300 168 315 3.4E-26 T 22-04-2016 JE55_RS14360 a6899d3ef61957d55e30a7a987dbd1d5 425 SUPERFAMILY SSF53822 32 385 7.74E-67 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS14360 a6899d3ef61957d55e30a7a987dbd1d5 425 PANTHER PTHR30483 4 385 5.7E-43 T 22-04-2016 JE55_RS14360 a6899d3ef61957d55e30a7a987dbd1d5 425 Gene3D G3DSA:3.40.50.2300 316 375 1.8E-28 T 22-04-2016 JE55_RS14360 a6899d3ef61957d55e30a7a987dbd1d5 425 Gene3D G3DSA:3.40.50.2300 28 167 1.8E-28 T 22-04-2016 JE55_RS14360 a6899d3ef61957d55e30a7a987dbd1d5 425 Pfam PF13458 Periplasmic binding protein 33 387 1.7E-70 T 22-04-2016 IPR028081 Leucine-binding protein domain JE55_RS11510 9f42e7b7f22a8e9245d1052547d3fd9d 426 PANTHER PTHR28004 16 426 3.6E-87 T 22-04-2016 JE55_RS11510 9f42e7b7f22a8e9245d1052547d3fd9d 426 SUPERFAMILY SSF51419 53 270 4.11E-30 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS11510 9f42e7b7f22a8e9245d1052547d3fd9d 426 Pfam PF01168 Alanine racemase, N-terminal domain 53 254 1.7E-13 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 JE55_RS11510 9f42e7b7f22a8e9245d1052547d3fd9d 426 SMART SM01119 311 413 2.3E-43 T 22-04-2016 IPR026956 D-serine dehydratase-like domain JE55_RS11510 9f42e7b7f22a8e9245d1052547d3fd9d 426 Pfam PF14031 Putative serine dehydratase domain 311 412 4.2E-17 T 22-04-2016 IPR026956 D-serine dehydratase-like domain JE55_RS11510 9f42e7b7f22a8e9245d1052547d3fd9d 426 PANTHER PTHR28004:SF1 16 426 3.6E-87 T 22-04-2016 JE55_RS11510 9f42e7b7f22a8e9245d1052547d3fd9d 426 Gene3D G3DSA:3.20.20.10 89 257 3.2E-11 T 22-04-2016 IPR029066 PLP-binding barrel JE55_RS17180 88d7e22310682abc27a52ff6bdc3dc85 616 PANTHER PTHR21091 7 25 7.1E-39 T 22-04-2016 JE55_RS17180 88d7e22310682abc27a52ff6bdc3dc85 616 PANTHER PTHR21091 335 532 7.1E-39 T 22-04-2016 JE55_RS17180 88d7e22310682abc27a52ff6bdc3dc85 616 SUPERFAMILY SSF159672 5 213 2.48E-44 T 22-04-2016 JE55_RS17180 88d7e22310682abc27a52ff6bdc3dc85 616 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 369 615 5.1E-88 T 22-04-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 JE55_RS17180 88d7e22310682abc27a52ff6bdc3dc85 616 Pfam PF11760 Cobalamin synthesis G N-terminal 49 127 8.9E-25 T 22-04-2016 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 JE55_RS17180 88d7e22310682abc27a52ff6bdc3dc85 616 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 368 579 7.4E-32 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS17180 88d7e22310682abc27a52ff6bdc3dc85 616 PANTHER PTHR21091:SF9 7 25 7.1E-39 T 22-04-2016 JE55_RS17180 88d7e22310682abc27a52ff6bdc3dc85 616 PANTHER PTHR21091:SF9 335 532 7.1E-39 T 22-04-2016 JE55_RS17180 88d7e22310682abc27a52ff6bdc3dc85 616 SUPERFAMILY SSF53790 364 612 9.81E-50 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 JE55_RS17180 88d7e22310682abc27a52ff6bdc3dc85 616 Gene3D G3DSA:3.30.950.10 484 597 9.0E-10 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 JE55_RS17180 88d7e22310682abc27a52ff6bdc3dc85 616 Gene3D G3DSA:3.40.1010.10 367 483 8.0E-30 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 Gene3D G3DSA:1.10.10.10 3 57 1.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 SMART SM00344 6 115 9.1E-40 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 1.1E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 1.1E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 1.1E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 SUPERFAMILY SSF46785 2 95 1.33E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 4.0E-18 T 22-04-2016 JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 PANTHER PTHR30154:SF28 1 151 2.9E-60 T 22-04-2016 JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 Pfam PF01037 Lrp/AsnC ligand binding domain 72 146 1.6E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 Gene3D G3DSA:3.30.70.920 59 143 2.9E-26 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 SUPERFAMILY SSF54909 66 154 3.08E-20 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS12545 d1265469f3011d6692f16c0ea899c794 167 PANTHER PTHR30154 1 151 2.9E-60 T 22-04-2016 JE55_RS03830 63efcd1bb6553ad1a821a7a7026e11f2 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.0E-29 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS03830 63efcd1bb6553ad1a821a7a7026e11f2 67 PIRSF PIRSF002599 1 67 1.2E-23 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 JE55_RS03830 63efcd1bb6553ad1a821a7a7026e11f2 67 Gene3D G3DSA:2.40.50.140 1 66 2.9E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03830 63efcd1bb6553ad1a821a7a7026e11f2 67 SUPERFAMILY SSF50249 2 66 8.36E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03830 63efcd1bb6553ad1a821a7a7026e11f2 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site JE55_RS03830 63efcd1bb6553ad1a821a7a7026e11f2 67 SMART SM00357 3 67 1.6E-28 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 JE55_RS03830 63efcd1bb6553ad1a821a7a7026e11f2 67 PANTHER PTHR11544 1 67 2.3E-33 T 22-04-2016 JE55_RS03830 63efcd1bb6553ad1a821a7a7026e11f2 67 PRINTS PR00050 Cold shock protein signature 40 58 6.4E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS03830 63efcd1bb6553ad1a821a7a7026e11f2 67 PRINTS PR00050 Cold shock protein signature 25 34 6.4E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS03830 63efcd1bb6553ad1a821a7a7026e11f2 67 PRINTS PR00050 Cold shock protein signature 4 19 6.4E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS04215 2441b3f0c0f3317256a96bf93b360ea1 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 268 17.243 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JE55_RS04215 2441b3f0c0f3317256a96bf93b360ea1 276 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 261 1.9E-72 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JE55_RS04215 2441b3f0c0f3317256a96bf93b360ea1 276 Pfam PF02673 Bacitracin resistance protein BacA 9 262 2.4E-78 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JE55_RS04215 2441b3f0c0f3317256a96bf93b360ea1 276 PANTHER PTHR30622 2 276 4.5E-117 T 22-04-2016 JE55_RS04215 2441b3f0c0f3317256a96bf93b360ea1 276 PANTHER PTHR30622:SF3 2 276 4.5E-117 T 22-04-2016 JE55_RS06795 a8217b63218138dc556b7c08db49d6e0 448 PANTHER PTHR35566:SF1 1 448 1.2E-99 T 22-04-2016 JE55_RS06795 a8217b63218138dc556b7c08db49d6e0 448 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 447 2.3E-144 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 JE55_RS06795 a8217b63218138dc556b7c08db49d6e0 448 PANTHER PTHR35566 1 448 1.2E-99 T 22-04-2016 JE55_RS06795 a8217b63218138dc556b7c08db49d6e0 448 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 446 7.4E-140 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 JE55_RS12725 eb4d25623c5bf320931edc9a44434faf 401 TIGRFAM TIGR00937 2A51: chromate efflux transporter 18 395 6.9E-102 T 22-04-2016 IPR014047 Chromate transporter, long chain JE55_RS12725 eb4d25623c5bf320931edc9a44434faf 401 Pfam PF02417 Chromate transporter 13 178 8.2E-32 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 JE55_RS12725 eb4d25623c5bf320931edc9a44434faf 401 Pfam PF02417 Chromate transporter 231 396 2.5E-36 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 JE55_RS12725 eb4d25623c5bf320931edc9a44434faf 401 PANTHER PTHR33567:SF3 10 399 1.7E-129 T 22-04-2016 JE55_RS12725 eb4d25623c5bf320931edc9a44434faf 401 PANTHER PTHR33567 10 399 1.7E-129 T 22-04-2016 JE55_RS12725 eb4d25623c5bf320931edc9a44434faf 401 PIRSF PIRSF004810 7 401 9.9E-127 T 22-04-2016 IPR014047 Chromate transporter, long chain JE55_RS15960 2932979158c91978be8f82c68a377e6e 234 SMART SM00862 149 225 3.5E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS15960 2932979158c91978be8f82c68a377e6e 234 PANTHER PTHR26402:SF405 1 226 2.4E-65 T 22-04-2016 JE55_RS15960 2932979158c91978be8f82c68a377e6e 234 PANTHER PTHR26402 1 226 2.4E-65 T 22-04-2016 JE55_RS15960 2932979158c91978be8f82c68a377e6e 234 SMART SM00448 1 114 2.6E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS15960 2932979158c91978be8f82c68a377e6e 234 SUPERFAMILY SSF46894 125 226 2.55E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS15960 2932979158c91978be8f82c68a377e6e 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 4.7E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS15960 2932979158c91978be8f82c68a377e6e 234 Gene3D G3DSA:3.40.50.2300 1 125 9.7E-31 T 22-04-2016 JE55_RS15960 2932979158c91978be8f82c68a377e6e 234 Gene3D G3DSA:1.10.10.10 127 227 2.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15960 2932979158c91978be8f82c68a377e6e 234 Pfam PF00072 Response regulator receiver domain 3 114 1.7E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS15960 2932979158c91978be8f82c68a377e6e 234 SUPERFAMILY SSF52172 1 131 3.98E-32 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS01815 fd4535e0ae9c49298321d961ccdeb5e8 167 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 2 166 1.5E-54 T 22-04-2016 IPR006498 Tail tube protein JE55_RS01815 fd4535e0ae9c49298321d961ccdeb5e8 167 PANTHER PTHR35861 1 167 8.3E-42 T 22-04-2016 JE55_RS01815 fd4535e0ae9c49298321d961ccdeb5e8 167 Pfam PF04985 Phage tail tube protein FII 3 166 1.7E-55 T 22-04-2016 IPR006498 Tail tube protein JE55_RS01815 fd4535e0ae9c49298321d961ccdeb5e8 167 PANTHER PTHR35861:SF2 1 167 8.3E-42 T 22-04-2016 JE55_RS04695 7bef4848ee6e7fb0a2b1efc1d1be235c 389 Pfam PF07690 Major Facilitator Superfamily 8 340 6.7E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS04695 7bef4848ee6e7fb0a2b1efc1d1be235c 389 SUPERFAMILY SSF103473 4 375 2.49E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS04695 7bef4848ee6e7fb0a2b1efc1d1be235c 389 PANTHER PTHR23501:SF4 1 382 1.7E-158 T 22-04-2016 JE55_RS04695 7bef4848ee6e7fb0a2b1efc1d1be235c 389 PANTHER PTHR23501 1 382 1.7E-158 T 22-04-2016 JE55_RS04695 7bef4848ee6e7fb0a2b1efc1d1be235c 389 Gene3D G3DSA:1.20.1250.20 5 181 6.9E-26 T 22-04-2016 JE55_RS04695 7bef4848ee6e7fb0a2b1efc1d1be235c 389 Gene3D G3DSA:1.20.1250.20 192 373 9.5E-17 T 22-04-2016 JE55_RS04245 acfd7b040c0be5b2cbc9c3d925611f8a 107 SMART SM00450 7 102 1.5E-22 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS04245 acfd7b040c0be5b2cbc9c3d925611f8a 107 Gene3D G3DSA:3.40.250.10 3 106 7.9E-30 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS04245 acfd7b040c0be5b2cbc9c3d925611f8a 107 PANTHER PTHR10657 1 107 7.5E-16 T 22-04-2016 JE55_RS04245 acfd7b040c0be5b2cbc9c3d925611f8a 107 PANTHER PTHR10657:SF12 1 107 7.5E-16 T 22-04-2016 JE55_RS04245 acfd7b040c0be5b2cbc9c3d925611f8a 107 SUPERFAMILY SSF52821 2 105 1.11E-29 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS04245 acfd7b040c0be5b2cbc9c3d925611f8a 107 Pfam PF00581 Rhodanese-like domain 10 98 5.0E-16 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS23125 65af0936eb284861d96baa6378fc7c60 241 PANTHER PTHR11059 1 241 1.4E-34 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 JE55_RS23125 65af0936eb284861d96baa6378fc7c60 241 Gene3D G3DSA:3.40.50.300 1 91 1.9E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS23125 65af0936eb284861d96baa6378fc7c60 241 SUPERFAMILY SSF52540 1 102 5.31E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00075 d4c4467c987cb7f507df48188072bec7 71 Gene3D G3DSA:3.30.70.1200 10 69 3.3E-4 T 22-04-2016 JE55_RS00075 d4c4467c987cb7f507df48188072bec7 71 Pfam PF04325 Protein of unknown function (DUF465) 18 60 3.8E-9 T 22-04-2016 IPR007420 Protein of unknown function DUF465 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 PANTHER PTHR13789 10 377 1.2E-90 T 22-04-2016 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 Gene3D G3DSA:3.30.9.10 331 348 1.2E-11 T 22-04-2016 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 Gene3D G3DSA:3.30.9.10 170 264 1.2E-11 T 22-04-2016 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 Pfam PF01494 FAD binding domain 10 348 4.9E-77 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 Gene3D G3DSA:3.50.50.60 293 321 7.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 Gene3D G3DSA:3.50.50.60 10 169 7.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 Gene3D G3DSA:3.30.9.10 265 292 5.8E-5 T 22-04-2016 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 SUPERFAMILY SSF51905 270 382 5.11E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 SUPERFAMILY SSF51905 10 178 5.11E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 PANTHER PTHR13789:SF90 10 377 1.2E-90 T 22-04-2016 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 5.0E-42 T 22-04-2016 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 316 334 5.0E-42 T 22-04-2016 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 283 298 5.0E-42 T 22-04-2016 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 5.0E-42 T 22-04-2016 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 298 314 5.0E-42 T 22-04-2016 JE55_RS03680 f5d191a75ebecd84965969e58b33230a 548 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 334 350 5.0E-42 T 22-04-2016 JE55_RS15775 9bc8440dbf9401b09838f1bf7bf2f762 539 Gene3D G3DSA:1.20.1250.20 31 217 3.3E-37 T 22-04-2016 JE55_RS15775 9bc8440dbf9401b09838f1bf7bf2f762 539 PANTHER PTHR23501:SF69 26 532 2.4E-150 T 22-04-2016 JE55_RS15775 9bc8440dbf9401b09838f1bf7bf2f762 539 PANTHER PTHR23501 26 532 2.4E-150 T 22-04-2016 JE55_RS15775 9bc8440dbf9401b09838f1bf7bf2f762 539 SUPERFAMILY SSF103473 19 218 1.14E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS15775 9bc8440dbf9401b09838f1bf7bf2f762 539 SUPERFAMILY SSF103473 504 529 1.14E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS15775 9bc8440dbf9401b09838f1bf7bf2f762 539 SUPERFAMILY SSF103473 272 443 1.14E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS15775 9bc8440dbf9401b09838f1bf7bf2f762 539 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 33 520 4.8E-129 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 JE55_RS15775 9bc8440dbf9401b09838f1bf7bf2f762 539 Pfam PF07690 Major Facilitator Superfamily 38 433 1.7E-49 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS15775 9bc8440dbf9401b09838f1bf7bf2f762 539 Gene3D G3DSA:1.20.1250.20 509 529 1.2E-14 T 22-04-2016 JE55_RS15775 9bc8440dbf9401b09838f1bf7bf2f762 539 Gene3D G3DSA:1.20.1250.20 287 449 1.2E-14 T 22-04-2016 JE55_RS15165 d09d99100627eb591b934f3efeec3e8f 270 SUPERFAMILY SSF53335 89 235 1.09E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS15165 d09d99100627eb591b934f3efeec3e8f 270 Gene3D G3DSA:3.40.50.150 95 236 1.0E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS15165 d09d99100627eb591b934f3efeec3e8f 270 PANTHER PTHR10108 94 189 4.8E-22 T 22-04-2016 JE55_RS15165 d09d99100627eb591b934f3efeec3e8f 270 PANTHER PTHR10108:SF836 94 189 4.8E-22 T 22-04-2016 JE55_RS15165 d09d99100627eb591b934f3efeec3e8f 270 Pfam PF08241 Methyltransferase domain 79 143 1.8E-10 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 JE55_RS12715 9c3b4ba4f06b0420f29967ccb41a4f7f 422 Gene3D G3DSA:1.50.10.20 68 241 1.7E-4 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid JE55_RS12715 9c3b4ba4f06b0420f29967ccb41a4f7f 422 SUPERFAMILY SSF48239 75 153 5.65E-5 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid JE55_RS14560 10e9d34b53c6ed8e014ec16a613167de 224 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 8 208 2.1E-6 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 JE55_RS05805 f5690a316bce05e9aa142f5a6333a215 174 Pfam PF04115 Ureidoglycolate lyase 6 163 2.2E-51 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 JE55_RS05805 f5690a316bce05e9aa142f5a6333a215 174 Gene3D G3DSA:2.60.120.480 6 166 3.7E-55 T 22-04-2016 IPR024060 Ureidoglycolate lyase domain GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 JE55_RS05805 f5690a316bce05e9aa142f5a6333a215 174 SUPERFAMILY SSF51182 5 165 8.45E-55 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS05805 f5690a316bce05e9aa142f5a6333a215 174 PANTHER PTHR21221 1 155 1.8E-44 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 JE55_RS05805 f5690a316bce05e9aa142f5a6333a215 174 PANTHER PTHR21221:SF2 1 155 1.8E-44 T 22-04-2016 JE55_RS05805 f5690a316bce05e9aa142f5a6333a215 174 Hamap MF_00616 Ureidoglycolate lyase [allA]. 5 166 39.333 T 22-04-2016 IPR023525 Ureidoglycolate lyase, bacterial GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 JE55_RS05805 f5690a316bce05e9aa142f5a6333a215 174 PIRSF PIRSF017306 5 162 2.5E-39 T 22-04-2016 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705|UniPathway: UPA00395 JE55_RS05235 53ff40b9dcf132eafab8bdd215cac45f 357 Pfam PF00793 DAHP synthetase I family 43 339 3.1E-106 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 JE55_RS05235 53ff40b9dcf132eafab8bdd215cac45f 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 7 350 2.3E-166 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 JE55_RS05235 53ff40b9dcf132eafab8bdd215cac45f 357 PIRSF PIRSF001361 2 353 3.6E-161 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 JE55_RS05235 53ff40b9dcf132eafab8bdd215cac45f 357 PANTHER PTHR21225 5 356 8.3E-240 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 JE55_RS05235 53ff40b9dcf132eafab8bdd215cac45f 357 PANTHER PTHR21225:SF7 5 356 8.3E-240 T 22-04-2016 JE55_RS05235 53ff40b9dcf132eafab8bdd215cac45f 357 SUPERFAMILY SSF51569 8 349 5.65E-138 T 22-04-2016 JE55_RS05235 53ff40b9dcf132eafab8bdd215cac45f 357 Gene3D G3DSA:3.20.20.70 10 350 8.3E-157 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS15560 5a92b0d83bc4253a5d9266177041694d 114 Pfam PF00816 H-NS histone family 7 83 9.9E-20 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 JE55_RS15560 5a92b0d83bc4253a5d9266177041694d 114 SUPERFAMILY SSF81273 57 92 5.49E-9 T 22-04-2016 JE55_RS15560 5a92b0d83bc4253a5d9266177041694d 114 Gene3D G3DSA:4.10.430.10 56 83 1.2E-8 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 JE55_RS15560 5a92b0d83bc4253a5d9266177041694d 114 SMART SM00528 51 92 0.0041 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 JE55_RS17440 7ce57d0579443b08650464876ed81d1f 210 Gene3D G3DSA:3.40.630.30 21 195 1.4E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS17440 7ce57d0579443b08650464876ed81d1f 210 PANTHER PTHR13256:SF43 7 199 2.0E-48 T 22-04-2016 JE55_RS17440 7ce57d0579443b08650464876ed81d1f 210 Pfam PF13302 Acetyltransferase (GNAT) domain 30 170 1.2E-24 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS17440 7ce57d0579443b08650464876ed81d1f 210 SUPERFAMILY SSF55729 21 194 2.38E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS17440 7ce57d0579443b08650464876ed81d1f 210 PANTHER PTHR13256 7 199 2.0E-48 T 22-04-2016 JE55_RS28120 53f57e9634cc092cbcd78b5889868948 164 PANTHER PTHR32196:SF27 1 164 7.2E-69 T 22-04-2016 JE55_RS28120 53f57e9634cc092cbcd78b5889868948 164 PANTHER PTHR32196 1 164 7.2E-69 T 22-04-2016 JE55_RS28120 53f57e9634cc092cbcd78b5889868948 164 Pfam PF02653 Branched-chain amino acid transport system / permease component 3 164 2.9E-22 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS11415 7216089d0ccec502120eb7b94021ff97 658 SUPERFAMILY SSF53474 340 475 5.1E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS11415 7216089d0ccec502120eb7b94021ff97 658 SUPERFAMILY SSF53474 554 626 5.1E-22 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS11415 7216089d0ccec502120eb7b94021ff97 658 Gene3D G3DSA:3.40.50.1820 339 476 2.8E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS11415 7216089d0ccec502120eb7b94021ff97 658 Gene3D G3DSA:3.40.50.1820 554 583 2.8E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS11415 7216089d0ccec502120eb7b94021ff97 658 SUPERFAMILY SSF53474 30 231 2.92E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS11415 7216089d0ccec502120eb7b94021ff97 658 Gene3D G3DSA:3.40.50.1820 188 255 1.5E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS11415 7216089d0ccec502120eb7b94021ff97 658 Gene3D G3DSA:3.40.50.1820 29 132 1.5E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS06810 346e08c0cba2aa70ca5a1678b925f70b 160 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 86 103 1.7E-8 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JE55_RS06810 346e08c0cba2aa70ca5a1678b925f70b 160 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 104 122 1.7E-8 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JE55_RS06810 346e08c0cba2aa70ca5a1678b925f70b 160 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 127 147 1.7E-8 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 JE55_RS06810 346e08c0cba2aa70ca5a1678b925f70b 160 Pfam PF01555 DNA methylase 84 142 1.9E-10 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 JE55_RS06810 346e08c0cba2aa70ca5a1678b925f70b 160 SUPERFAMILY SSF53335 1 147 6.08E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS06810 346e08c0cba2aa70ca5a1678b925f70b 160 Gene3D G3DSA:3.40.50.150 1 152 2.9E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS15365 c4d5e06f6c368b64620f370ffcbf9df5 233 SUPERFAMILY SSF51261 36 230 7.85E-45 T 22-04-2016 IPR011055 Duplicated hybrid motif JE55_RS15365 c4d5e06f6c368b64620f370ffcbf9df5 233 PANTHER PTHR21666:SF222 117 231 1.7E-41 T 22-04-2016 JE55_RS15365 c4d5e06f6c368b64620f370ffcbf9df5 233 Pfam PF01551 Peptidase family M23 132 226 1.0E-29 T 22-04-2016 IPR016047 Peptidase M23 JE55_RS15365 c4d5e06f6c368b64620f370ffcbf9df5 233 Pfam PF01476 LysM domain 31 73 4.3E-11 T 22-04-2016 IPR018392 LysM domain JE55_RS15365 c4d5e06f6c368b64620f370ffcbf9df5 233 SMART SM00257 30 74 2.2E-12 T 22-04-2016 IPR018392 LysM domain JE55_RS15365 c4d5e06f6c368b64620f370ffcbf9df5 233 Gene3D G3DSA:2.70.70.10 97 231 9.2E-38 T 22-04-2016 JE55_RS15365 c4d5e06f6c368b64620f370ffcbf9df5 233 PANTHER PTHR21666 117 231 1.7E-41 T 22-04-2016 JE55_RS15365 c4d5e06f6c368b64620f370ffcbf9df5 233 Gene3D G3DSA:3.10.350.10 29 74 2.3E-16 T 22-04-2016 IPR018392 LysM domain JE55_RS07345 2d750478dda3044d4bfdfd605f40ca63 64 Pfam PF00831 Ribosomal L29 protein 4 60 1.6E-19 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07345 2d750478dda3044d4bfdfd605f40ca63 64 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 16.502 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07345 2d750478dda3044d4bfdfd605f40ca63 64 Gene3D G3DSA:1.10.287.310 1 60 1.7E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07345 2d750478dda3044d4bfdfd605f40ca63 64 SUPERFAMILY SSF46561 1 61 8.11E-19 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07345 2d750478dda3044d4bfdfd605f40ca63 64 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07345 2d750478dda3044d4bfdfd605f40ca63 64 PANTHER PTHR10916 1 64 8.1E-18 T 22-04-2016 JE55_RS07345 2d750478dda3044d4bfdfd605f40ca63 64 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.5E-18 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS14915 b332f60efa92d404a91531139ef897b3 274 PANTHER PTHR30193 9 263 3.0E-39 T 22-04-2016 JE55_RS14915 b332f60efa92d404a91531139ef897b3 274 Gene3D G3DSA:1.10.3720.10 14 267 3.4E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS14915 b332f60efa92d404a91531139ef897b3 274 SUPERFAMILY SSF161098 8 263 1.31E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS14915 b332f60efa92d404a91531139ef897b3 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 265 1.6E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS02340 2631d23097c304e94b4f2634e691f547 330 PANTHER PTHR13833:SF53 57 232 1.7E-13 T 22-04-2016 JE55_RS02340 2631d23097c304e94b4f2634e691f547 330 PANTHER PTHR13833:SF53 276 317 1.7E-13 T 22-04-2016 JE55_RS02340 2631d23097c304e94b4f2634e691f547 330 SUPERFAMILY SSF50974 11 318 1.26E-68 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal JE55_RS02340 2631d23097c304e94b4f2634e691f547 330 PANTHER PTHR13833 57 232 1.7E-13 T 22-04-2016 JE55_RS02340 2631d23097c304e94b4f2634e691f547 330 PANTHER PTHR13833 276 317 1.7E-13 T 22-04-2016 JE55_RS02340 2631d23097c304e94b4f2634e691f547 330 Pfam PF10282 Lactonase, 7-bladed beta-propeller 100 295 1.3E-6 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 JE55_RS02340 2631d23097c304e94b4f2634e691f547 330 Gene3D G3DSA:2.130.10.10 21 318 3.3E-46 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 JE55_RS05195 6b22e4d3fa33eeb62bc691f4b022d913 355 SUPERFAMILY SSF53800 15 345 9.32E-106 T 22-04-2016 JE55_RS05195 6b22e4d3fa33eeb62bc691f4b022d913 355 Hamap MF_00323 Ferrochelatase [hemH]. 15 340 38.092 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 JE55_RS05195 6b22e4d3fa33eeb62bc691f4b022d913 355 Pfam PF00762 Ferrochelatase 17 339 2.1E-114 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 JE55_RS05195 6b22e4d3fa33eeb62bc691f4b022d913 355 Gene3D G3DSA:3.40.50.1400 15 220 7.5E-69 T 22-04-2016 JE55_RS05195 6b22e4d3fa33eeb62bc691f4b022d913 355 TIGRFAM TIGR00109 hemH: ferrochelatase 15 340 5.3E-92 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 JE55_RS05195 6b22e4d3fa33eeb62bc691f4b022d913 355 PANTHER PTHR11108 16 341 1.1E-121 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 JE55_RS05195 6b22e4d3fa33eeb62bc691f4b022d913 355 ProSitePatterns PS00534 Ferrochelatase signature. 209 227 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 JE55_RS05195 6b22e4d3fa33eeb62bc691f4b022d913 355 Gene3D G3DSA:3.40.50.1400 221 341 6.5E-34 T 22-04-2016 JE55_RS14500 fa14cba3038bf6fe29a9264d73226748 420 SUPERFAMILY SSF51126 26 399 6.29E-40 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor JE55_RS14500 fa14cba3038bf6fe29a9264d73226748 420 Gene3D G3DSA:2.160.20.10 41 327 1.5E-27 T 22-04-2016 IPR012334 Pectin lyase fold JE55_RS14500 fa14cba3038bf6fe29a9264d73226748 420 Gene3D G3DSA:2.160.20.10 375 409 1.5E-27 T 22-04-2016 IPR012334 Pectin lyase fold JE55_RS14500 fa14cba3038bf6fe29a9264d73226748 420 SMART SM00710 306 328 120.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS14500 fa14cba3038bf6fe29a9264d73226748 420 SMART SM00710 157 179 53.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS14500 fa14cba3038bf6fe29a9264d73226748 420 SMART SM00710 235 258 1.5 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS14500 fa14cba3038bf6fe29a9264d73226748 420 SMART SM00710 134 156 32.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS14500 fa14cba3038bf6fe29a9264d73226748 420 SMART SM00710 181 203 290.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS14500 fa14cba3038bf6fe29a9264d73226748 420 SMART SM00710 267 301 37.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS14500 fa14cba3038bf6fe29a9264d73226748 420 SMART SM00710 211 234 550.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat JE55_RS14500 fa14cba3038bf6fe29a9264d73226748 420 Pfam PF13229 Right handed beta helix region 134 298 1.1E-13 T 22-04-2016 JE55_RS32250 607f8d5a20dd9a806eb0b6a07be7cb4a 107 SUPERFAMILY SSF52402 1 100 7.28E-18 T 22-04-2016 JE55_RS32250 607f8d5a20dd9a806eb0b6a07be7cb4a 107 Pfam PF02540 NAD synthase 2 92 6.6E-19 T 22-04-2016 IPR022310 NAD/GMP synthase JE55_RS32250 607f8d5a20dd9a806eb0b6a07be7cb4a 107 Gene3D G3DSA:3.40.50.620 2 99 3.0E-17 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS09500 b13fe46d0e29aa0f8183b60692911443 343 Pfam PF01636 Phosphotransferase enzyme family 51 281 3.1E-34 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase JE55_RS09500 b13fe46d0e29aa0f8183b60692911443 343 Hamap MF_01497 Stress response kinase A [srkA]. 15 336 47.369 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 JE55_RS09500 b13fe46d0e29aa0f8183b60692911443 343 Gene3D G3DSA:3.90.1200.10 125 341 2.3E-50 T 22-04-2016 JE55_RS09500 b13fe46d0e29aa0f8183b60692911443 343 PANTHER PTHR39573:SF1 13 340 4.3E-139 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 JE55_RS09500 b13fe46d0e29aa0f8183b60692911443 343 SUPERFAMILY SSF56112 18 342 1.08E-79 T 22-04-2016 IPR011009 Protein kinase-like domain JE55_RS09500 b13fe46d0e29aa0f8183b60692911443 343 PANTHER PTHR39573 13 340 4.3E-139 T 22-04-2016 JE55_RS17055 1e2762cea375671974a25da8f976c499 706 PANTHER PTHR30472 264 702 1.3E-90 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 JE55_RS17055 1e2762cea375671974a25da8f976c499 706 Gene3D G3DSA:1.10.3470.10 35 349 4.3E-59 T 22-04-2016 IPR029022 ABC transporter, BtuC-like JE55_RS17055 1e2762cea375671974a25da8f976c499 706 Gene3D G3DSA:1.10.3470.10 382 701 7.3E-82 T 22-04-2016 IPR029022 ABC transporter, BtuC-like JE55_RS17055 1e2762cea375671974a25da8f976c499 706 Pfam PF01032 FecCD transport family 49 347 5.1E-55 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 JE55_RS17055 1e2762cea375671974a25da8f976c499 706 Pfam PF01032 FecCD transport family 393 695 1.5E-75 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 JE55_RS17055 1e2762cea375671974a25da8f976c499 706 SUPERFAMILY SSF81345 379 694 4.84E-66 T 22-04-2016 IPR029022 ABC transporter, BtuC-like JE55_RS17055 1e2762cea375671974a25da8f976c499 706 SUPERFAMILY SSF81345 67 347 1.83E-48 T 22-04-2016 IPR029022 ABC transporter, BtuC-like JE55_RS17055 1e2762cea375671974a25da8f976c499 706 PANTHER PTHR30472:SF16 264 702 1.3E-90 T 22-04-2016 JE55_RS16025 7b6cd272779130eae9d733a495ff98ad 733 PANTHER PTHR30509:SF6 22 270 3.5E-224 T 22-04-2016 JE55_RS16025 7b6cd272779130eae9d733a495ff98ad 733 PANTHER PTHR30509:SF6 344 681 3.5E-224 T 22-04-2016 JE55_RS16025 7b6cd272779130eae9d733a495ff98ad 733 Pfam PF04632 Fusaric acid resistance protein family 33 715 1.4E-220 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 JE55_RS16025 7b6cd272779130eae9d733a495ff98ad 733 PANTHER PTHR30509 22 270 3.5E-224 T 22-04-2016 JE55_RS16025 7b6cd272779130eae9d733a495ff98ad 733 PANTHER PTHR30509 344 681 3.5E-224 T 22-04-2016 JE55_RS09585 87a18544a7eb961c149326d59f939d92 343 Gene3D G3DSA:3.40.50.20 167 199 2.0E-6 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS09585 87a18544a7eb961c149326d59f939d92 343 Pfam PF02625 XdhC and CoxI family 15 83 7.7E-23 T 22-04-2016 IPR003777 XdhC- CoxI JE55_RS09585 87a18544a7eb961c149326d59f939d92 343 PANTHER PTHR30388:SF4 5 315 1.8E-87 T 22-04-2016 JE55_RS09585 87a18544a7eb961c149326d59f939d92 343 PANTHER PTHR30388 5 315 1.8E-87 T 22-04-2016 JE55_RS09585 87a18544a7eb961c149326d59f939d92 343 Pfam PF13478 XdhC Rossmann domain 168 309 1.7E-38 T 22-04-2016 IPR027051 XdhC Rossmann domain JE55_RS14345 c3ee253b11fb4859a7f68084d574db30 211 PANTHER PTHR11002:SF20 1 206 1.1E-73 T 22-04-2016 JE55_RS14345 c3ee253b11fb4859a7f68084d574db30 211 Pfam PF00484 Carbonic anhydrase 37 187 2.4E-44 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS14345 c3ee253b11fb4859a7f68084d574db30 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS14345 c3ee253b11fb4859a7f68084d574db30 211 SMART SM00947 30 191 1.8E-61 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS14345 c3ee253b11fb4859a7f68084d574db30 211 SUPERFAMILY SSF53056 2 191 2.75E-61 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS14345 c3ee253b11fb4859a7f68084d574db30 211 Gene3D G3DSA:3.40.1050.10 4 193 4.0E-67 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS14345 c3ee253b11fb4859a7f68084d574db30 211 PANTHER PTHR11002 1 206 1.1E-73 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS14345 c3ee253b11fb4859a7f68084d574db30 211 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS06860 d28d2dc5781417534462a257fef8107b 299 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 60 274 2.0E-34 T 22-04-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 JE55_RS00640 1512a6bc20ea441630acc229a59d733b 104 PIRSF PIRSF003113 2 104 2.9E-29 T 22-04-2016 IPR002634 BolA protein JE55_RS00640 1512a6bc20ea441630acc229a59d733b 104 Gene3D G3DSA:3.30.70.1500 16 93 4.4E-28 T 22-04-2016 JE55_RS00640 1512a6bc20ea441630acc229a59d733b 104 SUPERFAMILY SSF82657 11 99 3.92E-28 T 22-04-2016 IPR002634 BolA protein JE55_RS00640 1512a6bc20ea441630acc229a59d733b 104 Pfam PF01722 BolA-like protein 21 96 5.0E-30 T 22-04-2016 IPR002634 BolA protein JE55_RS00640 1512a6bc20ea441630acc229a59d733b 104 PANTHER PTHR12735 17 97 1.2E-29 T 22-04-2016 JE55_RS00640 1512a6bc20ea441630acc229a59d733b 104 PANTHER PTHR12735:SF24 17 97 1.2E-29 T 22-04-2016 JE55_RS08335 281f6dd2c7b31caffbb781f11ddecf21 89 SUPERFAMILY SSF55103 5 88 2.62E-23 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JE55_RS08335 281f6dd2c7b31caffbb781f11ddecf21 89 Pfam PF02913 FAD linked oxidases, C-terminal domain 5 87 1.3E-23 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 JE55_RS08335 281f6dd2c7b31caffbb781f11ddecf21 89 PANTHER PTHR11748:SF76 6 89 1.4E-25 T 22-04-2016 JE55_RS08335 281f6dd2c7b31caffbb781f11ddecf21 89 Gene3D G3DSA:1.10.45.10 49 88 1.8E-11 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JE55_RS08335 281f6dd2c7b31caffbb781f11ddecf21 89 PANTHER PTHR11748 6 89 1.4E-25 T 22-04-2016 JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 SUPERFAMILY SSF55785 6 113 1.38E-10 T 22-04-2016 IPR000014 PAS domain JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 PANTHER PTHR26402 108 179 4.3E-12 T 22-04-2016 JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 PANTHER PTHR26402:SF599 108 179 4.3E-12 T 22-04-2016 JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 Gene3D G3DSA:1.10.10.10 123 179 1.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 SUPERFAMILY SSF46894 110 178 5.78E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 Gene3D G3DSA:3.30.450.20 6 114 1.5E-9 T 22-04-2016 JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 154 1.2E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 124 138 1.2E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 166 1.2E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 ProSitePatterns PS00622 LuxR-type HTH domain signature. 138 165 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 SMART SM00421 121 178 2.7E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 Pfam PF13426 PAS domain 20 115 5.9E-7 T 22-04-2016 IPR000014 PAS domain JE55_RS16125 ecea2afdf862fc3267dcc7cf30c99288 181 Pfam PF00196 Bacterial regulatory proteins, luxR family 123 176 8.8E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS16645 87865eca1af360de2f94d54f1ac52fe3 385 PANTHER PTHR30011 1 381 1.8E-182 T 22-04-2016 JE55_RS16645 87865eca1af360de2f94d54f1ac52fe3 385 Gene3D G3DSA:3.20.20.30 1 360 1.2E-103 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JE55_RS16645 87865eca1af360de2f94d54f1ac52fe3 385 SUPERFAMILY SSF51679 1 358 2.09E-94 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JE55_RS16645 87865eca1af360de2f94d54f1ac52fe3 385 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 2 384 68.605 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 JE55_RS16645 87865eca1af360de2f94d54f1ac52fe3 385 PANTHER PTHR30011:SF1 1 381 1.8E-182 T 22-04-2016 JE55_RS16645 87865eca1af360de2f94d54f1ac52fe3 385 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 353 3.5E-187 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 JE55_RS16645 87865eca1af360de2f94d54f1ac52fe3 385 Pfam PF00296 Luciferase-like monooxygenase 1 330 8.2E-91 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 JE55_RS16485 b04c315c9f2b8321044546fad10085d7 216 PANTHER PTHR34772:SF1 10 97 9.2E-18 T 22-04-2016 JE55_RS16485 b04c315c9f2b8321044546fad10085d7 216 PANTHER PTHR34772 10 97 9.2E-18 T 22-04-2016 JE55_RS16485 b04c315c9f2b8321044546fad10085d7 216 SUPERFAMILY SSF50182 9 66 1.03E-17 T 22-04-2016 IPR010920 LSM domain JE55_RS16485 b04c315c9f2b8321044546fad10085d7 216 Gene3D G3DSA:2.30.30.100 5 69 2.6E-25 T 22-04-2016 JE55_RS16485 b04c315c9f2b8321044546fad10085d7 216 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 10 66 2.1E-19 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 JE55_RS16485 b04c315c9f2b8321044546fad10085d7 216 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 4 67 25.896 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 JE55_RS04005 aea70195c644b429818e39f69459b8a6 768 PANTHER PTHR22683 232 766 8.2E-256 T 22-04-2016 JE55_RS04005 aea70195c644b429818e39f69459b8a6 768 Pfam PF01580 FtsK/SpoIIIE family 386 595 4.5E-62 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JE55_RS04005 aea70195c644b429818e39f69459b8a6 768 SUPERFAMILY SSF46785 700 766 1.02E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04005 aea70195c644b429818e39f69459b8a6 768 SUPERFAMILY SSF52540 401 666 2.12E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04005 aea70195c644b429818e39f69459b8a6 768 Gene3D G3DSA:3.40.50.300 359 662 2.8E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04005 aea70195c644b429818e39f69459b8a6 768 SMART SM00843 700 765 2.3E-37 T 22-04-2016 IPR018541 FtsK gamma domain JE55_RS04005 aea70195c644b429818e39f69459b8a6 768 PANTHER PTHR22683:SF41 232 766 8.2E-256 T 22-04-2016 JE55_RS04005 aea70195c644b429818e39f69459b8a6 768 Pfam PF09397 Ftsk gamma domain 702 762 6.1E-27 T 22-04-2016 IPR018541 FtsK gamma domain JE55_RS04005 aea70195c644b429818e39f69459b8a6 768 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 18 198 2.0E-51 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region JE55_RS17545 5e51a618c4766f4a1f43e005d5ff04df 159 Pfam PF11005 Protein of unknown function (DUF2844) 24 158 1.3E-38 T 22-04-2016 IPR021267 Protein of unknown function DUF2844 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 SUPERFAMILY SSF82714 185 269 6.8E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 SUPERFAMILY SSF82866 294 505 4.19E-37 T 22-04-2016 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 Pfam PF00873 AcrB/AcrD/AcrF family 6 1036 8.9E-234 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 PANTHER PTHR32063 2 1042 0.0 T 22-04-2016 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 SUPERFAMILY SSF82693 45 126 7.59E-20 T 22-04-2016 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 PANTHER PTHR32063:SF19 2 1042 0.0 T 22-04-2016 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 SUPERFAMILY SSF82714 723 806 8.76E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 Gene3D G3DSA:3.30.70.1430 45 140 3.4E-23 T 22-04-2016 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 Gene3D G3DSA:1.10.3850.10 813 1039 2.0E-47 T 22-04-2016 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 Gene3D G3DSA:1.10.3850.10 275 507 9.9E-63 T 22-04-2016 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 Gene3D G3DSA:3.30.2090.10 724 806 5.7E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 Gene3D G3DSA:3.30.2090.10 185 269 1.7E-20 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 SUPERFAMILY SSF82693 271 328 2.62E-21 T 22-04-2016 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 SUPERFAMILY SSF82693 137 184 2.62E-21 T 22-04-2016 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1045 0.0 T 22-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 7.6E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 7.6E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 7.6E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 7.6E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 7.6E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 7.6E-23 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS09980 e29a3d6a3fe14d991ffab5168e10e46b 1070 SUPERFAMILY SSF82866 807 1041 1.57E-43 T 22-04-2016 JE55_RS04980 d92fb79b3e68ed7824446f23dc649ee7 439 Gene3D G3DSA:3.40.640.10 108 324 8.9E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS04980 d92fb79b3e68ed7824446f23dc649ee7 439 Pfam PF00155 Aminotransferase class I and II 91 434 2.1E-45 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS04980 d92fb79b3e68ed7824446f23dc649ee7 439 Gene3D G3DSA:3.90.1150.10 325 437 4.0E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS04980 d92fb79b3e68ed7824446f23dc649ee7 439 PANTHER PTHR13693 74 439 1.2E-127 T 22-04-2016 JE55_RS04980 d92fb79b3e68ed7824446f23dc649ee7 439 SUPERFAMILY SSF53383 52 437 6.19E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS16865 9a286ab482eda86cc6df20f2ad7b6549 482 PANTHER PTHR30332 178 462 7.0E-67 T 22-04-2016 JE55_RS16865 9a286ab482eda86cc6df20f2ad7b6549 482 PANTHER PTHR30332:SF1 178 462 7.0E-67 T 22-04-2016 JE55_RS16865 9a286ab482eda86cc6df20f2ad7b6549 482 PRINTS PR00811 Bacterial general secretion pathway protein D signature 195 205 3.3E-8 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS16865 9a286ab482eda86cc6df20f2ad7b6549 482 PRINTS PR00811 Bacterial general secretion pathway protein D signature 420 434 3.3E-8 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS16865 9a286ab482eda86cc6df20f2ad7b6549 482 PRINTS PR00811 Bacterial general secretion pathway protein D signature 397 415 3.3E-8 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS16865 9a286ab482eda86cc6df20f2ad7b6549 482 PRINTS PR00811 Bacterial general secretion pathway protein D signature 267 291 3.3E-8 T 22-04-2016 IPR001775 GspD/PilQ family JE55_RS16865 9a286ab482eda86cc6df20f2ad7b6549 482 Pfam PF13629 Pilus formation protein N terminal region 59 126 1.5E-19 T 22-04-2016 IPR032789 Pilus formation protein, N-terminal JE55_RS16865 9a286ab482eda86cc6df20f2ad7b6549 482 Pfam PF00263 Bacterial type II and III secretion system protein 271 433 7.3E-46 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 JE55_RS15550 4663e33042c9c8872a9d7ed08898e920 236 PANTHER PTHR30128 91 229 1.4E-24 T 22-04-2016 JE55_RS15550 4663e33042c9c8872a9d7ed08898e920 236 Gene3D G3DSA:3.30.1330.60 111 229 9.3E-34 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS15550 4663e33042c9c8872a9d7ed08898e920 236 SUPERFAMILY SSF103088 112 229 4.45E-29 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS15550 4663e33042c9c8872a9d7ed08898e920 236 ProSitePatterns PS01068 OmpA-like domain. 156 200 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 JE55_RS15550 4663e33042c9c8872a9d7ed08898e920 236 PRINTS PR01021 OMPA domain signature 154 169 4.2E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS15550 4663e33042c9c8872a9d7ed08898e920 236 PRINTS PR01021 OMPA domain signature 169 185 4.2E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS15550 4663e33042c9c8872a9d7ed08898e920 236 PRINTS PR01021 OMPA domain signature 124 146 4.2E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS15550 4663e33042c9c8872a9d7ed08898e920 236 Pfam PF00691 OmpA family 128 214 1.9E-18 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS11240 87928d7aa5d2b45c36830d1ae515c949 181 Gene3D G3DSA:2.40.50.140 161 181 7.5E-59 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS11240 87928d7aa5d2b45c36830d1ae515c949 181 Gene3D G3DSA:2.40.50.140 1 122 7.5E-59 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS11240 87928d7aa5d2b45c36830d1ae515c949 181 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 38.859 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 JE55_RS11240 87928d7aa5d2b45c36830d1ae515c949 181 Pfam PF00436 Single-strand binding protein family 4 108 1.2E-42 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 JE55_RS11240 87928d7aa5d2b45c36830d1ae515c949 181 SUPERFAMILY SSF50249 3 181 1.03E-62 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS11240 87928d7aa5d2b45c36830d1ae515c949 181 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 181 3.9E-53 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 JE55_RS11240 87928d7aa5d2b45c36830d1ae515c949 181 PANTHER PTHR10302 3 181 4.7E-51 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 JE55_RS01260 8ade0998495fe38440e9a6ba8d2f0d13 124 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 12 120 1.6E-27 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR JE55_RS01260 8ade0998495fe38440e9a6ba8d2f0d13 124 PANTHER PTHR30041:SF3 10 123 1.1E-30 T 22-04-2016 JE55_RS01260 8ade0998495fe38440e9a6ba8d2f0d13 124 Gene3D G3DSA:3.40.30.10 12 123 7.9E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS01260 8ade0998495fe38440e9a6ba8d2f0d13 124 PANTHER PTHR30041 10 123 1.1E-30 T 22-04-2016 JE55_RS01260 8ade0998495fe38440e9a6ba8d2f0d13 124 Pfam PF03960 ArsC family 13 120 3.2E-13 T 22-04-2016 IPR006660 Arsenate reductase-like JE55_RS01260 8ade0998495fe38440e9a6ba8d2f0d13 124 SUPERFAMILY SSF52833 11 123 5.32E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS06045 9c981e5e4b78a86f8b79bca8a59a7f80 403 PIRSF PIRSF000355 53 403 1.2E-133 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 JE55_RS06045 9c981e5e4b78a86f8b79bca8a59a7f80 403 PANTHER PTHR23409:SF18 62 398 2.3E-153 T 22-04-2016 JE55_RS06045 9c981e5e4b78a86f8b79bca8a59a7f80 403 Gene3D G3DSA:1.10.620.20 64 378 1.6E-111 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 JE55_RS06045 9c981e5e4b78a86f8b79bca8a59a7f80 403 Pfam PF00268 Ribonucleotide reductase, small chain 83 370 2.6E-82 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 JE55_RS06045 9c981e5e4b78a86f8b79bca8a59a7f80 403 SUPERFAMILY SSF47240 64 374 6.09E-98 T 22-04-2016 IPR009078 Ferritin-like superfamily JE55_RS06045 9c981e5e4b78a86f8b79bca8a59a7f80 403 PANTHER PTHR23409 62 398 2.3E-153 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 JE55_RS09195 50fa85897be468e9a5f33844d7089c11 351 PANTHER PTHR30537 1 300 2.2E-115 T 22-04-2016 JE55_RS09195 50fa85897be468e9a5f33844d7089c11 351 Pfam PF03466 LysR substrate binding domain 89 293 1.5E-47 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS09195 50fa85897be468e9a5f33844d7089c11 351 PANTHER PTHR30537:SF5 1 300 2.2E-115 T 22-04-2016 JE55_RS09195 50fa85897be468e9a5f33844d7089c11 351 Gene3D G3DSA:1.10.10.10 3 82 3.5E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS09195 50fa85897be468e9a5f33844d7089c11 351 Gene3D G3DSA:3.40.190.10 92 177 1.5E-18 T 22-04-2016 JE55_RS09195 50fa85897be468e9a5f33844d7089c11 351 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.6E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS09195 50fa85897be468e9a5f33844d7089c11 351 Gene3D G3DSA:3.40.190.10 178 261 8.3E-23 T 22-04-2016 JE55_RS09195 50fa85897be468e9a5f33844d7089c11 351 SUPERFAMILY SSF53850 89 296 8.51E-47 T 22-04-2016 JE55_RS09195 50fa85897be468e9a5f33844d7089c11 351 SUPERFAMILY SSF46785 3 111 7.11E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08575 66d786c2a1c253fadc7fca181a9ae4f2 230 SUPERFAMILY SSF46894 124 221 4.54E-22 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS08575 66d786c2a1c253fadc7fca181a9ae4f2 230 PANTHER PTHR26402:SF279 1 225 9.0E-75 T 22-04-2016 JE55_RS08575 66d786c2a1c253fadc7fca181a9ae4f2 230 SMART SM00448 1 112 1.2E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS08575 66d786c2a1c253fadc7fca181a9ae4f2 230 Gene3D G3DSA:1.10.10.10 128 222 6.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08575 66d786c2a1c253fadc7fca181a9ae4f2 230 SMART SM00862 148 221 4.7E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS08575 66d786c2a1c253fadc7fca181a9ae4f2 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 4.7E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 JE55_RS08575 66d786c2a1c253fadc7fca181a9ae4f2 230 Gene3D G3DSA:3.40.50.2300 1 122 2.6E-37 T 22-04-2016 JE55_RS08575 66d786c2a1c253fadc7fca181a9ae4f2 230 PANTHER PTHR26402 1 225 9.0E-75 T 22-04-2016 JE55_RS08575 66d786c2a1c253fadc7fca181a9ae4f2 230 Pfam PF00072 Response regulator receiver domain 4 113 1.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS08575 66d786c2a1c253fadc7fca181a9ae4f2 230 SUPERFAMILY SSF52172 1 125 9.25E-38 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS12730 fcd26e8b673068fa05800b3233b068aa 251 SUPERFAMILY SSF46785 153 228 1.61E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12730 fcd26e8b673068fa05800b3233b068aa 251 Pfam PF13545 Crp-like helix-turn-helix domain 155 226 1.9E-14 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JE55_RS12730 fcd26e8b673068fa05800b3233b068aa 251 Pfam PF00027 Cyclic nucleotide-binding domain 36 122 4.6E-20 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain JE55_RS12730 fcd26e8b673068fa05800b3233b068aa 251 Gene3D G3DSA:1.10.10.10 153 227 3.7E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12730 fcd26e8b673068fa05800b3233b068aa 251 SUPERFAMILY SSF51206 12 147 1.44E-32 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like JE55_RS12730 fcd26e8b673068fa05800b3233b068aa 251 Gene3D G3DSA:2.60.120.10 14 149 9.8E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS12730 fcd26e8b673068fa05800b3233b068aa 251 SMART SM00100 17 138 3.0E-13 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain JE55_RS12730 fcd26e8b673068fa05800b3233b068aa 251 PANTHER PTHR24567 11 228 3.7E-42 T 22-04-2016 JE55_RS12730 fcd26e8b673068fa05800b3233b068aa 251 PANTHER PTHR24567:SF30 11 228 3.7E-42 T 22-04-2016 JE55_RS12730 fcd26e8b673068fa05800b3233b068aa 251 SMART SM00419 172 220 7.1E-7 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JE55_RS11490 f6dd1f9c50da7159a5c624eca9554c24 304 Pfam PF12787 EcsC protein family 17 282 1.6E-44 T 22-04-2016 IPR024787 EcsC protein JE55_RS14155 5a70a5721565f1023c97eb7530830bb9 216 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 9 215 42.654 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 JE55_RS14155 5a70a5721565f1023c97eb7530830bb9 216 PANTHER PTHR10285 11 204 1.0E-80 T 22-04-2016 JE55_RS14155 5a70a5721565f1023c97eb7530830bb9 216 Pfam PF14681 Uracil phosphoribosyltransferase 13 214 1.2E-68 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS14155 5a70a5721565f1023c97eb7530830bb9 216 SUPERFAMILY SSF53271 10 213 3.32E-61 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS14155 5a70a5721565f1023c97eb7530830bb9 216 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 12 215 2.7E-75 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 JE55_RS14155 5a70a5721565f1023c97eb7530830bb9 216 Gene3D G3DSA:3.40.50.2020 9 215 7.9E-74 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS04180 10904de36e65b70e3083f4b8af1b4289 128 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 18.225 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JE55_RS04180 10904de36e65b70e3083f4b8af1b4289 128 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 117 2.4E-19 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JE55_RS04180 10904de36e65b70e3083f4b8af1b4289 128 PANTHER PTHR28259 3 125 7.5E-31 T 22-04-2016 JE55_RS04180 10904de36e65b70e3083f4b8af1b4289 128 TIGRFAM TIGR00494 crcB: protein CrcB 7 120 6.4E-28 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 JE55_RS04735 865ddce30b454fd8fd93476020c2f80e 318 SUPERFAMILY SSF56281 16 309 2.66E-53 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS04735 865ddce30b454fd8fd93476020c2f80e 318 PANTHER PTHR11935 5 239 6.0E-55 T 22-04-2016 JE55_RS04735 865ddce30b454fd8fd93476020c2f80e 318 Gene3D G3DSA:3.60.15.10 11 250 9.6E-53 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS04735 865ddce30b454fd8fd93476020c2f80e 318 SMART SM00849 35 221 5.0E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS04735 865ddce30b454fd8fd93476020c2f80e 318 PANTHER PTHR11935:SF5 5 239 6.0E-55 T 22-04-2016 JE55_RS16830 37639b3df1775bc886840da7d1b329fa 348 SUPERFAMILY SSF53850 41 280 2.03E-27 T 22-04-2016 JE55_RS16830 37639b3df1775bc886840da7d1b329fa 348 PANTHER PTHR30024:SF2 2 341 3.2E-146 T 22-04-2016 JE55_RS16830 37639b3df1775bc886840da7d1b329fa 348 Pfam PF13379 NMT1-like family 41 277 2.2E-18 T 22-04-2016 JE55_RS16830 37639b3df1775bc886840da7d1b329fa 348 PANTHER PTHR30024 2 341 3.2E-146 T 22-04-2016 JE55_RS13550 ad65799834c53a07d64cea0b09942b68 179 Gene3D G3DSA:4.10.1230.10 123 178 2.3E-24 T 22-04-2016 IPR027438 Ecotin, C-terminal JE55_RS13550 ad65799834c53a07d64cea0b09942b68 179 Pfam PF03974 Ecotin 48 167 6.1E-49 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain JE55_RS13550 ad65799834c53a07d64cea0b09942b68 179 SUPERFAMILY SSF49772 45 178 1.44E-50 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain JE55_RS13550 ad65799834c53a07d64cea0b09942b68 179 PANTHER PTHR35890 14 179 2.2E-56 T 22-04-2016 JE55_RS13550 ad65799834c53a07d64cea0b09942b68 179 Gene3D G3DSA:2.60.40.550 45 122 7.1E-34 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain JE55_RS13550 ad65799834c53a07d64cea0b09942b68 179 PIRSF PIRSF006865 1 179 1.6E-65 T 22-04-2016 IPR005658 Proteinase inhibitor I11, ecotin JE55_RS13550 ad65799834c53a07d64cea0b09942b68 179 PANTHER PTHR35890:SF4 14 179 2.2E-56 T 22-04-2016 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 SUPERFAMILY SSF55973 236 385 3.02E-68 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 Gene3D G3DSA:3.30.300.10 247 386 1.5E-68 T 22-04-2016 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 SUPERFAMILY SSF55973 4 110 1.77E-45 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 SUPERFAMILY SSF55973 113 235 8.24E-52 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 PANTHER PTHR11964 2 381 1.2E-265 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 102 2.2E-40 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 119 129 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 236 374 4.6E-68 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 PIRSF PIRSF000497 1 387 7.4E-171 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 386 56.626 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 Pfam PF02772 S-adenosylmethionine synthetase, central domain 117 234 1.9E-45 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 Gene3D G3DSA:3.30.300.10 12 135 6.5E-46 T 22-04-2016 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 383 1.1E-182 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 Gene3D G3DSA:3.30.300.10 136 236 1.5E-43 T 22-04-2016 JE55_RS09450 1ae8854d8612dddea3c0218356b46484 395 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 262 270 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 JE55_RS10800 a7d3bf53557780a48bf69be0bee30f6d 97 Gene3D G3DSA:3.30.70.1060 11 83 1.1E-8 T 22-04-2016 JE55_RS10800 a7d3bf53557780a48bf69be0bee30f6d 97 SUPERFAMILY SSF54909 1 83 2.63E-17 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS10800 a7d3bf53557780a48bf69be0bee30f6d 97 PANTHER PTHR37828:SF1 1 97 1.8E-20 T 22-04-2016 JE55_RS10800 a7d3bf53557780a48bf69be0bee30f6d 97 Pfam PF03795 YCII-related domain 10 82 7.9E-10 T 22-04-2016 IPR005545 YCII-related JE55_RS10800 a7d3bf53557780a48bf69be0bee30f6d 97 PANTHER PTHR37828 1 97 1.8E-20 T 22-04-2016 JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 SUPERFAMILY SSF50331 238 371 2.28E-24 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 PANTHER PTHR24220:SF446 286 293 1.9E-158 T 22-04-2016 JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 PANTHER PTHR24220:SF446 5 268 1.9E-158 T 22-04-2016 JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 SMART SM00382 29 212 2.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 Gene3D G3DSA:2.40.50.140 291 356 4.1E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 Gene3D G3DSA:2.40.50.100 357 371 2.1E-11 T 22-04-2016 JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 Gene3D G3DSA:2.40.50.100 240 290 2.1E-11 T 22-04-2016 JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 PANTHER PTHR24220 286 293 1.9E-158 T 22-04-2016 JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 PANTHER PTHR24220 5 268 1.9E-158 T 22-04-2016 JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 SUPERFAMILY SSF52540 4 243 4.2E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 Gene3D G3DSA:3.40.50.300 3 239 2.3E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 Pfam PF00005 ABC transporter 20 162 2.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS04025 bb463a6a9012e00a6915294b471a7da1 372 Pfam PF08402 TOBE domain 286 363 9.5E-6 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 JE55_RS00160 a748d40079ca77b84af5fff322cad6f4 360 PANTHER PTHR34475:SF1 18 360 1.6E-31 T 22-04-2016 JE55_RS00160 a748d40079ca77b84af5fff322cad6f4 360 Pfam PF13464 Domain of unknown function (DUF4115) 283 359 3.1E-23 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 JE55_RS00160 a748d40079ca77b84af5fff322cad6f4 360 SUPERFAMILY SSF47413 29 95 5.63E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS00160 a748d40079ca77b84af5fff322cad6f4 360 Pfam PF13413 Helix-turn-helix domain 34 94 9.6E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS00160 a748d40079ca77b84af5fff322cad6f4 360 Gene3D G3DSA:1.10.260.40 31 107 4.0E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS00160 a748d40079ca77b84af5fff322cad6f4 360 PANTHER PTHR34475 18 360 1.6E-31 T 22-04-2016 JE55_RS00160 a748d40079ca77b84af5fff322cad6f4 360 SMART SM00530 34 95 2.2E-4 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JE55_RS16250 ef2cd20f77185cac2f4244d6b1c5e520 401 Pfam PF06804 NlpB/DapX lipoprotein 71 235 2.9E-18 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein JE55_RS16250 ef2cd20f77185cac2f4244d6b1c5e520 401 Pfam PF06804 NlpB/DapX lipoprotein 265 396 1.2E-16 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein JE55_RS05330 05a8bae48f77eff1918978a9dad5918a 185 Pfam PF06754 Phosphonate metabolism protein PhnG 12 184 1.2E-58 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 JE55_RS05330 05a8bae48f77eff1918978a9dad5918a 185 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 10 185 9.5E-62 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 JE55_RS11070 ed696222e936915ac3ba7777f6b59e4d 214 SUPERFAMILY SSF52833 1 86 3.08E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS11070 ed696222e936915ac3ba7777f6b59e4d 214 PANTHER PTHR11260:SF289 1 214 2.2E-94 T 22-04-2016 JE55_RS11070 ed696222e936915ac3ba7777f6b59e4d 214 Gene3D G3DSA:3.40.30.10 1 95 5.5E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS11070 ed696222e936915ac3ba7777f6b59e4d 214 PANTHER PTHR11260 1 214 2.2E-94 T 22-04-2016 JE55_RS11070 ed696222e936915ac3ba7777f6b59e4d 214 SUPERFAMILY SSF47616 82 213 3.62E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS11070 ed696222e936915ac3ba7777f6b59e4d 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 80 6.0E-16 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JE55_RS11070 ed696222e936915ac3ba7777f6b59e4d 214 Gene3D G3DSA:1.20.1050.10 96 214 6.8E-54 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS11070 ed696222e936915ac3ba7777f6b59e4d 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 213 1.3E-85 T 22-04-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 JE55_RS15745 3c47b7ce7ed7eb56a09eb6e154de1003 279 PANTHER PTHR30251 33 275 3.3E-54 T 22-04-2016 JE55_RS15745 3c47b7ce7ed7eb56a09eb6e154de1003 279 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 49 166 4.4E-14 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 JE55_RS15745 3c47b7ce7ed7eb56a09eb6e154de1003 279 PANTHER PTHR30251:SF4 33 275 3.3E-54 T 22-04-2016 JE55_RS15745 3c47b7ce7ed7eb56a09eb6e154de1003 279 Gene3D G3DSA:2.60.40.360 40 169 2.5E-15 T 22-04-2016 IPR008962 PapD-like JE55_RS15745 3c47b7ce7ed7eb56a09eb6e154de1003 279 SUPERFAMILY SSF49354 35 169 4.45E-25 T 22-04-2016 IPR008962 PapD-like JE55_RS17590 50dbfc2667a4cdb2a6805e58ad127154 291 Pfam PF13469 Sulfotransferase family 5 206 1.3E-18 T 22-04-2016 JE55_RS17590 50dbfc2667a4cdb2a6805e58ad127154 291 Gene3D G3DSA:3.40.50.300 5 259 9.9E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17590 50dbfc2667a4cdb2a6805e58ad127154 291 SUPERFAMILY SSF52540 5 239 3.19E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18200 5a5febc3319d5daec7c5cf0871d07c34 67 Pfam PF06945 Protein of unknown function (DUF1289) 11 55 1.8E-18 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 JE55_RS18200 5a5febc3319d5daec7c5cf0871d07c34 67 PANTHER PTHR35175 10 53 6.2E-13 T 22-04-2016 JE55_RS00095 7a5de641a0cc07ef831326453eba514a 197 SUPERFAMILY SSF53271 10 187 1.26E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS00095 7a5de641a0cc07ef831326453eba514a 197 Gene3D G3DSA:3.40.50.2020 19 177 1.4E-36 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS00095 7a5de641a0cc07ef831326453eba514a 197 Pfam PF00156 Phosphoribosyl transferase domain 25 170 3.5E-24 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 JE55_RS00025 9cd16f5e1b4d5ff6b3ec52113a10a97f 308 Gene3D G3DSA:3.40.1190.20 6 307 5.1E-87 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS00025 9cd16f5e1b4d5ff6b3ec52113a10a97f 308 SUPERFAMILY SSF53613 6 306 2.03E-82 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS00025 9cd16f5e1b4d5ff6b3ec52113a10a97f 308 PANTHER PTHR10584 6 306 2.1E-62 T 22-04-2016 JE55_RS00025 9cd16f5e1b4d5ff6b3ec52113a10a97f 308 Pfam PF00294 pfkB family carbohydrate kinase 7 298 3.3E-56 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB JE55_RS06270 d2cef735902478dbc68971acc5f18aea 168 Gene3D G3DSA:3.40.30.10 1 166 5.6E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS06270 d2cef735902478dbc68971acc5f18aea 168 Pfam PF08534 Redoxin 3 163 1.6E-38 T 22-04-2016 IPR013740 Redoxin GO:0016491 JE55_RS06270 d2cef735902478dbc68971acc5f18aea 168 SUPERFAMILY SSF52833 1 164 2.06E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS06270 d2cef735902478dbc68971acc5f18aea 168 PANTHER PTHR10430 2 166 2.6E-78 T 22-04-2016 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 Gene3D G3DSA:3.50.30.20 7 146 9.1E-60 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 Gene3D G3DSA:3.40.50.880 156 375 1.0E-78 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 6 377 47.901 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 8 374 7.0E-142 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 Pfam PF00117 Glutamine amidotransferase class-I 196 370 2.3E-45 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 235 244 6.2E-10 T 22-04-2016 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 263 274 6.2E-10 T 22-04-2016 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 348 361 6.2E-10 T 22-04-2016 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 SUPERFAMILY SSF52021 7 152 5.49E-57 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 297 6.5E-39 T 22-04-2016 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 263 279 6.5E-39 T 22-04-2016 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 246 6.5E-39 T 22-04-2016 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 305 316 6.5E-39 T 22-04-2016 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 6.5E-39 T 22-04-2016 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 SUPERFAMILY SSF52317 158 374 1.07E-61 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 SMART SM01097 6 136 5.7E-89 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 135 2.4E-51 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 JE55_RS15195 24f616d6883b182d35d59feae5412f58 381 PANTHER PTHR11405 6 378 1.8E-224 T 22-04-2016 JE55_RS13760 c09a05df943915f53abe86deb51a5ea4 158 Gene3D G3DSA:3.40.470.10 5 156 2.4E-32 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS13760 c09a05df943915f53abe86deb51a5ea4 158 SMART SM00987 6 157 1.2E-8 T 22-04-2016 JE55_RS13760 c09a05df943915f53abe86deb51a5ea4 158 SMART SM00986 6 157 1.2E-8 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS13760 c09a05df943915f53abe86deb51a5ea4 158 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 4 153 1.1E-53 T 22-04-2016 IPR026353 Hypoxanthine-DNA glycosylase JE55_RS13760 c09a05df943915f53abe86deb51a5ea4 158 SUPERFAMILY SSF52141 4 156 6.67E-37 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS13760 c09a05df943915f53abe86deb51a5ea4 158 Pfam PF03167 Uracil DNA glycosylase superfamily 10 154 6.8E-9 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like JE55_RS11980 bc08fa659de5e5634a4adf45d95aaa28 131 Gene3D G3DSA:3.40.1660.10 1 115 1.3E-31 T 22-04-2016 JE55_RS11980 bc08fa659de5e5634a4adf45d95aaa28 131 PANTHER PTHR31299 1 116 6.9E-29 T 22-04-2016 JE55_RS11980 bc08fa659de5e5634a4adf45d95aaa28 131 Pfam PF05139 Erythromycin esterase 1 109 2.6E-25 T 22-04-2016 IPR007815 Erythromycin esterase GO:0046677 JE55_RS11980 bc08fa659de5e5634a4adf45d95aaa28 131 SUPERFAMILY SSF159501 1 115 2.09E-28 T 22-04-2016 JE55_RS11980 bc08fa659de5e5634a4adf45d95aaa28 131 PANTHER PTHR31299:SF0 1 116 6.9E-29 T 22-04-2016 JE55_RS03805 6e1f9218b984ae63be0990d7d1ac9def 778 SUPERFAMILY SSF56935 45 249 2.08E-98 T 22-04-2016 JE55_RS03805 6e1f9218b984ae63be0990d7d1ac9def 778 SUPERFAMILY SSF56935 290 777 2.08E-98 T 22-04-2016 JE55_RS03805 6e1f9218b984ae63be0990d7d1ac9def 778 Pfam PF07715 TonB-dependent Receptor Plug Domain 70 179 4.6E-14 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 JE55_RS03805 6e1f9218b984ae63be0990d7d1ac9def 778 Pfam PF00593 TonB dependent receptor 529 776 3.2E-35 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 JE55_RS03805 6e1f9218b984ae63be0990d7d1ac9def 778 PANTHER PTHR32552 33 249 4.9E-53 T 22-04-2016 JE55_RS03805 6e1f9218b984ae63be0990d7d1ac9def 778 PANTHER PTHR32552 287 778 4.9E-53 T 22-04-2016 JE55_RS03805 6e1f9218b984ae63be0990d7d1ac9def 778 PANTHER PTHR32552:SF0 33 249 4.9E-53 T 22-04-2016 JE55_RS03805 6e1f9218b984ae63be0990d7d1ac9def 778 PANTHER PTHR32552:SF0 287 778 4.9E-53 T 22-04-2016 JE55_RS03805 6e1f9218b984ae63be0990d7d1ac9def 778 Gene3D G3DSA:2.40.170.20 184 777 1.7E-83 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 JE55_RS03805 6e1f9218b984ae63be0990d7d1ac9def 778 Gene3D G3DSA:2.170.130.10 48 183 2.1E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 JE55_RS16985 550917e515c5957835a11e7eadb4cfb4 533 Gene3D G3DSA:3.40.50.620 378 498 7.8E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS16985 550917e515c5957835a11e7eadb4cfb4 533 Gene3D G3DSA:3.40.50.620 150 304 7.8E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS16985 550917e515c5957835a11e7eadb4cfb4 533 Gene3D G3DSA:3.60.20.10 39 145 4.3E-4 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS16985 550917e515c5957835a11e7eadb4cfb4 533 Pfam PF00733 Asparagine synthase 162 497 1.0E-14 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 JE55_RS16985 550917e515c5957835a11e7eadb4cfb4 533 SUPERFAMILY SSF52402 158 298 3.26E-23 T 22-04-2016 JE55_RS16985 550917e515c5957835a11e7eadb4cfb4 533 SUPERFAMILY SSF52402 371 479 3.26E-23 T 22-04-2016 JE55_RS06745 caa6eb1f0f0342450706c5069b539e2c 373 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 4 366 1.1E-119 T 22-04-2016 IPR017740 Type VI secretion system-associated, ImpA JE55_RS06745 caa6eb1f0f0342450706c5069b539e2c 373 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 131 9.0E-37 T 22-04-2016 IPR010657 ImpA, N-terminal JE55_RS06745 caa6eb1f0f0342450706c5069b539e2c 373 PANTHER PTHR37951 4 371 3.5E-39 T 22-04-2016 JE55_RS06745 caa6eb1f0f0342450706c5069b539e2c 373 PANTHER PTHR37951:SF1 4 371 3.5E-39 T 22-04-2016 JE55_RS29075 eaf4e37a83ae375bcaaff4001a683600 206 PANTHER PTHR30401 1 169 2.2E-42 T 22-04-2016 JE55_RS29075 eaf4e37a83ae375bcaaff4001a683600 206 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 1 204 1.9E-73 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 JE55_RS29075 eaf4e37a83ae375bcaaff4001a683600 206 SUPERFAMILY SSF52821 2 39 1.92E-7 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS29075 eaf4e37a83ae375bcaaff4001a683600 206 Gene3D G3DSA:3.40.250.10 2 38 2.2E-8 T 22-04-2016 IPR001763 Rhodanese-like domain JE55_RS29075 eaf4e37a83ae375bcaaff4001a683600 206 PANTHER PTHR30401:SF0 1 169 2.2E-42 T 22-04-2016 JE55_RS29075 eaf4e37a83ae375bcaaff4001a683600 206 Gene3D G3DSA:3.40.50.300 40 78 1.4E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14460 109a64b14a15a3ce23a5f388dc3214dc 490 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 4 477 17.993 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 JE55_RS14460 109a64b14a15a3ce23a5f388dc3214dc 490 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 420 439 2.8E-8 T 22-04-2016 JE55_RS14460 109a64b14a15a3ce23a5f388dc3214dc 490 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 307 319 2.8E-8 T 22-04-2016 JE55_RS14460 109a64b14a15a3ce23a5f388dc3214dc 490 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 72 97 2.8E-8 T 22-04-2016 JE55_RS14460 109a64b14a15a3ce23a5f388dc3214dc 490 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 215 236 2.8E-8 T 22-04-2016 JE55_RS14460 109a64b14a15a3ce23a5f388dc3214dc 490 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 7 476 1.7E-131 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 JE55_RS14460 109a64b14a15a3ce23a5f388dc3214dc 490 Pfam PF00361 Proton-conducting membrane transporter 125 426 2.7E-71 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 JE55_RS14460 109a64b14a15a3ce23a5f388dc3214dc 490 PANTHER PTHR22773 1 490 2.2E-160 T 22-04-2016 JE55_RS14460 109a64b14a15a3ce23a5f388dc3214dc 490 PANTHER PTHR22773:SF41 1 490 2.2E-160 T 22-04-2016 JE55_RS06305 ac6f7ab378265e0d00b32512a6dc46e0 430 PANTHER PTHR30474:SF2 43 422 8.2E-140 T 22-04-2016 JE55_RS06305 ac6f7ab378265e0d00b32512a6dc46e0 430 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 58 420 1.8E-123 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 JE55_RS06305 ac6f7ab378265e0d00b32512a6dc46e0 430 PANTHER PTHR30474 43 422 8.2E-140 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 JE55_RS06305 ac6f7ab378265e0d00b32512a6dc46e0 430 Pfam PF01098 Cell cycle protein 61 422 1.0E-103 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 JE55_RS06305 ac6f7ab378265e0d00b32512a6dc46e0 430 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 56 429 39.555 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 JE55_RS16320 fa2293193e541edeb7be88b5544b81c3 122 Gene3D G3DSA:3.30.300.20 8 118 1.2E-35 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta JE55_RS16320 fa2293193e541edeb7be88b5544b81c3 122 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 118 19.559 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 JE55_RS16320 fa2293193e541edeb7be88b5544b81c3 122 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 14 98 9.0E-36 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 JE55_RS16320 fa2293193e541edeb7be88b5544b81c3 122 PANTHER PTHR33515 7 122 4.5E-28 T 22-04-2016 JE55_RS16320 fa2293193e541edeb7be88b5544b81c3 122 Pfam PF02033 Ribosome-binding factor A 10 111 6.7E-28 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 JE55_RS16320 fa2293193e541edeb7be88b5544b81c3 122 SUPERFAMILY SSF89919 7 114 1.44E-30 T 22-04-2016 IPR023799 Ribosome-binding factor A domain JE55_RS16320 fa2293193e541edeb7be88b5544b81c3 122 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 9 115 8.1E-24 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 JE55_RS03885 faf4fe042248fb79610799aa8fcb8309 210 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 15 204 1.5E-49 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 JE55_RS03885 faf4fe042248fb79610799aa8fcb8309 210 SUPERFAMILY SSF52972 12 207 3.92E-66 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like JE55_RS03885 faf4fe042248fb79610799aa8fcb8309 210 Gene3D G3DSA:3.90.950.10 10 208 6.0E-74 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like JE55_RS03885 faf4fe042248fb79610799aa8fcb8309 210 PANTHER PTHR11067:SF9 9 206 8.7E-69 T 22-04-2016 JE55_RS03885 faf4fe042248fb79610799aa8fcb8309 210 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 13 208 45.958 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 JE55_RS03885 faf4fe042248fb79610799aa8fcb8309 210 PANTHER PTHR11067 9 206 8.7E-69 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 JE55_RS03885 faf4fe042248fb79610799aa8fcb8309 210 Pfam PF01725 Ham1 family 15 204 1.3E-51 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 JE55_RS12940 2d6d22ca489fa508590a860525e2e180 326 PANTHER PTHR30426 16 318 9.5E-155 T 22-04-2016 JE55_RS12940 2d6d22ca489fa508590a860525e2e180 326 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 17 296 1.2E-101 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 JE55_RS12940 2d6d22ca489fa508590a860525e2e180 326 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 16 298 38.397 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 JE55_RS12940 2d6d22ca489fa508590a860525e2e180 326 Pfam PF02401 LytB protein 18 294 3.1E-94 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 JE55_RS14830 17cba0aad8ae87d88e98d59322819fa9 643 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 610 56.222 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 JE55_RS14830 17cba0aad8ae87d88e98d59322819fa9 643 PANTHER PTHR30557 131 161 0.0 T 22-04-2016 JE55_RS14830 17cba0aad8ae87d88e98d59322819fa9 643 PANTHER PTHR30557 207 643 0.0 T 22-04-2016 JE55_RS14830 17cba0aad8ae87d88e98d59322819fa9 643 PANTHER PTHR30557 9 96 0.0 T 22-04-2016 JE55_RS14830 17cba0aad8ae87d88e98d59322819fa9 643 Pfam PF13667 ThiC-associated domain 21 98 2.5E-34 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 JE55_RS14830 17cba0aad8ae87d88e98d59322819fa9 643 Pfam PF01964 Radical SAM ThiC family 139 604 5.6E-201 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 JE55_RS14830 17cba0aad8ae87d88e98d59322819fa9 643 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 607 1.5E-216 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 JE55_RS14830 17cba0aad8ae87d88e98d59322819fa9 643 PANTHER PTHR30557:SF1 131 161 0.0 T 22-04-2016 JE55_RS14830 17cba0aad8ae87d88e98d59322819fa9 643 PANTHER PTHR30557:SF1 207 643 0.0 T 22-04-2016 JE55_RS14830 17cba0aad8ae87d88e98d59322819fa9 643 PANTHER PTHR30557:SF1 9 96 0.0 T 22-04-2016 JE55_RS09970 be8b365fae85c484f14f15e3c3cd88e4 433 PANTHER PTHR30203 19 419 7.0E-32 T 22-04-2016 JE55_RS09970 be8b365fae85c484f14f15e3c3cd88e4 433 Pfam PF02321 Outer membrane efflux protein 256 421 1.6E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS09970 be8b365fae85c484f14f15e3c3cd88e4 433 Pfam PF02321 Outer membrane efflux protein 41 225 1.3E-16 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 JE55_RS09970 be8b365fae85c484f14f15e3c3cd88e4 433 Gene3D G3DSA:1.20.1600.10 33 421 7.8E-41 T 22-04-2016 JE55_RS09970 be8b365fae85c484f14f15e3c3cd88e4 433 PANTHER PTHR30203:SF1 19 419 7.0E-32 T 22-04-2016 JE55_RS09970 be8b365fae85c484f14f15e3c3cd88e4 433 SUPERFAMILY SSF56954 12 421 1.26E-57 T 22-04-2016 JE55_RS16740 7405dcdcb226ffb5e5598f2d5ea710d9 244 Pfam PF11159 Protein of unknown function (DUF2939) 24 116 1.4E-31 T 22-04-2016 IPR021330 Protein of unknown function DUF2939 JE55_RS02360 44f0e03a707434d10a3c7f42bf8a5246 443 SUPERFAMILY SSF103473 12 427 3.27E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS02360 44f0e03a707434d10a3c7f42bf8a5246 443 PANTHER PTHR23508:SF1 19 430 1.7E-134 T 22-04-2016 JE55_RS02360 44f0e03a707434d10a3c7f42bf8a5246 443 Gene3D G3DSA:1.20.1250.20 243 429 2.3E-16 T 22-04-2016 JE55_RS02360 44f0e03a707434d10a3c7f42bf8a5246 443 Gene3D G3DSA:1.20.1250.20 19 220 3.6E-20 T 22-04-2016 JE55_RS02360 44f0e03a707434d10a3c7f42bf8a5246 443 PANTHER PTHR23508 19 430 1.7E-134 T 22-04-2016 JE55_RS02360 44f0e03a707434d10a3c7f42bf8a5246 443 Pfam PF00083 Sugar (and other) transporter 22 231 3.8E-22 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 JE55_RS11160 6f6656e4c8938807ee5b1bf404fc2f81 151 PANTHER PTHR30505 1 151 7.3E-42 T 22-04-2016 JE55_RS11160 6f6656e4c8938807ee5b1bf404fc2f81 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 8 148 7.9E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- JE55_RS11160 6f6656e4c8938807ee5b1bf404fc2f81 151 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- JE55_RS11160 6f6656e4c8938807ee5b1bf404fc2f81 151 Gene3D G3DSA:3.40.930.10 1 149 9.0E-45 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- JE55_RS11160 6f6656e4c8938807ee5b1bf404fc2f81 151 PANTHER PTHR30505:SF6 1 151 7.3E-42 T 22-04-2016 JE55_RS11160 6f6656e4c8938807ee5b1bf404fc2f81 151 SUPERFAMILY SSF55804 1 149 7.72E-46 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 JE55_RS11160 6f6656e4c8938807ee5b1bf404fc2f81 151 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 4 147 1.5E-41 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- JE55_RS17040 9c79faa47999072cb831f3a64844407a 80 PANTHER PTHR38444 8 80 2.2E-29 T 22-04-2016 JE55_RS17040 9c79faa47999072cb831f3a64844407a 80 PANTHER PTHR38444:SF1 8 80 2.2E-29 T 22-04-2016 JE55_RS17040 9c79faa47999072cb831f3a64844407a 80 Pfam PF03621 MbtH-like protein 9 59 3.1E-24 T 22-04-2016 IPR005153 MbtH-like protein JE55_RS17040 9c79faa47999072cb831f3a64844407a 80 Gene3D G3DSA:3.90.820.10 18 76 1.9E-32 T 22-04-2016 JE55_RS17040 9c79faa47999072cb831f3a64844407a 80 SMART SM00923 10 60 3.1E-27 T 22-04-2016 IPR005153 MbtH-like protein JE55_RS17040 9c79faa47999072cb831f3a64844407a 80 SUPERFAMILY SSF160582 10 75 5.36E-29 T 22-04-2016 JE55_RS16130 6937ae31018e98d1bbfb97e98d390f24 234 Gene3D G3DSA:3.40.1080.10 2 215 8.1E-103 T 22-04-2016 JE55_RS16130 6937ae31018e98d1bbfb97e98d390f24 234 PANTHER PTHR13707 1 231 4.9E-141 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 JE55_RS16130 6937ae31018e98d1bbfb97e98d390f24 234 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 22-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 JE55_RS16130 6937ae31018e98d1bbfb97e98d390f24 234 SMART SM00882 5 217 8.9E-97 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 JE55_RS16130 6937ae31018e98d1bbfb97e98d390f24 234 Pfam PF01144 Coenzyme A transferase 7 216 3.0E-80 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 JE55_RS16130 6937ae31018e98d1bbfb97e98d390f24 234 SUPERFAMILY SSF100950 2 226 1.26E-88 T 22-04-2016 JE55_RS16130 6937ae31018e98d1bbfb97e98d390f24 234 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 216 2.5E-83 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 JE55_RS01800 f32a04677822d1b941ed97c01014f7e1 293 Pfam PF06995 Phage P2 GpU 171 288 3.3E-32 T 22-04-2016 IPR009734 Myoviridae, GpU JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 Gene3D G3DSA:3.40.50.970 16 186 6.3E-48 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 536 2.6E-30 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 PANTHER PTHR18968:SF133 1 539 1.0E-219 T 22-04-2016 JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 Gene3D G3DSA:3.40.50.970 361 538 6.3E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 PANTHER PTHR18968 1 539 1.0E-219 T 22-04-2016 JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 SUPERFAMILY SSF52518 16 187 4.0E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 333 1.2E-14 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 Gene3D G3DSA:3.40.50.1220 192 349 3.2E-45 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 423 442 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 17 183 5.1E-45 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 SUPERFAMILY SSF52518 364 538 3.4E-43 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS12505 39e9f61666573e5f3b99987ed88fcdcf 539 SUPERFAMILY SSF52467 193 350 2.34E-60 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS01070 6dc5736362121e7b73753386f6260029 107 Gene3D G3DSA:3.10.20.280 3 86 3.5E-35 T 22-04-2016 IPR005346 RnfH protein JE55_RS01070 6dc5736362121e7b73753386f6260029 107 Hamap MF_00460 Protein RnfH [rnfH]. 2 92 25.498 T 22-04-2016 IPR005346 RnfH protein JE55_RS01070 6dc5736362121e7b73753386f6260029 107 SUPERFAMILY SSF54285 3 76 8.24E-25 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JE55_RS01070 6dc5736362121e7b73753386f6260029 107 Pfam PF03658 RnfH family Ubiquitin 3 84 9.5E-33 T 22-04-2016 IPR005346 RnfH protein JE55_RS01070 6dc5736362121e7b73753386f6260029 107 PANTHER PTHR37483:SF1 1 104 3.8E-33 T 22-04-2016 JE55_RS01070 6dc5736362121e7b73753386f6260029 107 PANTHER PTHR37483 1 104 3.8E-33 T 22-04-2016 JE55_RS16390 4204b876aad355b9ea7b67a71c63a66e 153 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 33 151 6.5E-32 T 22-04-2016 IPR019223 Domain of unknown function DUF2147 JE55_RS16390 4204b876aad355b9ea7b67a71c63a66e 153 PANTHER PTHR36919 6 151 4.6E-46 T 22-04-2016 JE55_RS16390 4204b876aad355b9ea7b67a71c63a66e 153 PANTHER PTHR36919:SF1 6 151 4.6E-46 T 22-04-2016 JE55_RS16590 aeda64d9fd899c704a9d49e74de05e25 219 SUPERFAMILY SSF161098 12 207 1.7E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16590 aeda64d9fd899c704a9d49e74de05e25 219 PANTHER PTHR30614 4 219 1.0E-96 T 22-04-2016 JE55_RS16590 aeda64d9fd899c704a9d49e74de05e25 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 213 3.8E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16590 aeda64d9fd899c704a9d49e74de05e25 219 PANTHER PTHR30614:SF18 4 219 1.0E-96 T 22-04-2016 JE55_RS16590 aeda64d9fd899c704a9d49e74de05e25 219 Gene3D G3DSA:1.10.3720.10 11 213 4.3E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16590 aeda64d9fd899c704a9d49e74de05e25 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 1.4E-29 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 JE55_RS12475 22cf77e88aa2692bf42a7d09f6bfc950 398 PANTHER PTHR22935 1 374 2.3E-79 T 22-04-2016 JE55_RS12475 22cf77e88aa2692bf42a7d09f6bfc950 398 SUPERFAMILY SSF56601 8 387 2.51E-87 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12475 22cf77e88aa2692bf42a7d09f6bfc950 398 Gene3D G3DSA:3.40.710.10 11 388 1.1E-81 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS12475 22cf77e88aa2692bf42a7d09f6bfc950 398 PANTHER PTHR22935:SF77 1 374 2.3E-79 T 22-04-2016 JE55_RS12475 22cf77e88aa2692bf42a7d09f6bfc950 398 Pfam PF00144 Beta-lactamase 13 378 4.3E-66 T 22-04-2016 IPR001466 Beta-lactamase-related JE55_RS10100 dfa400a399b19152e59469466e6e535e 304 SUPERFAMILY SSF103481 194 292 2.75E-12 T 22-04-2016 JE55_RS10100 dfa400a399b19152e59469466e6e535e 304 PANTHER PTHR22911 9 303 5.9E-62 T 22-04-2016 JE55_RS10100 dfa400a399b19152e59469466e6e535e 304 SUPERFAMILY SSF103481 44 146 6.02E-13 T 22-04-2016 JE55_RS10100 dfa400a399b19152e59469466e6e535e 304 Pfam PF00892 EamA-like transporter family 160 289 4.3E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS10100 dfa400a399b19152e59469466e6e535e 304 Pfam PF00892 EamA-like transporter family 13 144 9.3E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS10100 dfa400a399b19152e59469466e6e535e 304 PANTHER PTHR22911:SF44 9 303 5.9E-62 T 22-04-2016 JE55_RS08990 af80a04b15d6af8729517de65e117681 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.935 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS08990 af80a04b15d6af8729517de65e117681 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.1E-24 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS08990 af80a04b15d6af8729517de65e117681 44 PANTHER PTHR14503 1 43 1.2E-19 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS08990 af80a04b15d6af8729517de65e117681 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS08990 af80a04b15d6af8729517de65e117681 44 Pfam PF00468 Ribosomal protein L34 1 43 2.2E-23 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS08990 af80a04b15d6af8729517de65e117681 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 42 5.0E-16 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS17155 bbebdf034c154e0dc33756af550e66cb 427 SMART SM00382 47 188 3.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS17155 bbebdf034c154e0dc33756af550e66cb 427 PANTHER PTHR32039 22 319 2.0E-98 T 22-04-2016 JE55_RS17155 bbebdf034c154e0dc33756af550e66cb 427 SUPERFAMILY SSF52540 24 300 6.89E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17155 bbebdf034c154e0dc33756af550e66cb 427 Gene3D G3DSA:1.10.8.80 233 307 1.2E-24 T 22-04-2016 JE55_RS17155 bbebdf034c154e0dc33756af550e66cb 427 PANTHER PTHR32039:SF10 22 319 2.0E-98 T 22-04-2016 JE55_RS17155 bbebdf034c154e0dc33756af550e66cb 427 Gene3D G3DSA:3.40.50.300 24 185 1.7E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17155 bbebdf034c154e0dc33756af550e66cb 427 Pfam PF07728 AAA domain (dynein-related subfamily) 51 180 2.7E-10 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 JE55_RS03660 56dd6c636c8b1affc052b36de61a7f9b 157 PANTHER PTHR10371 22 149 2.9E-16 T 22-04-2016 JE55_RS03660 56dd6c636c8b1affc052b36de61a7f9b 157 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 13 148 1.5E-30 T 22-04-2016 JE55_RS03660 56dd6c636c8b1affc052b36de61a7f9b 157 SUPERFAMILY SSF52833 10 152 5.03E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS03660 56dd6c636c8b1affc052b36de61a7f9b 157 Gene3D G3DSA:3.40.30.10 73 155 1.4E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS03660 56dd6c636c8b1affc052b36de61a7f9b 157 PIRSF PIRSF000216 7 157 4.5E-31 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 Gene3D G3DSA:3.40.190.10 87 181 2.3E-21 T 22-04-2016 JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 Gene3D G3DSA:1.10.10.10 1 84 1.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 Pfam PF03466 LysR substrate binding domain 86 289 4.1E-43 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 SUPERFAMILY SSF46785 1 109 2.05E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.9E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 SUPERFAMILY SSF53850 86 291 7.06E-41 T 22-04-2016 JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 PANTHER PTHR30126 1 303 3.2E-94 T 22-04-2016 JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 Gene3D G3DSA:3.40.190.10 182 262 2.5E-14 T 22-04-2016 JE55_RS15845 8ae185e917437d9285fbb307f1451c0d 321 PANTHER PTHR30126:SF31 1 303 3.2E-94 T 22-04-2016 JE55_RS03800 1043c4c1a0640dd051fe62c1a543358b 416 Gene3D G3DSA:2.120.10.10 53 239 2.7E-21 T 22-04-2016 IPR011040 Sialidases JE55_RS03800 1043c4c1a0640dd051fe62c1a543358b 416 Gene3D G3DSA:2.120.10.10 278 406 3.6E-11 T 22-04-2016 IPR011040 Sialidases JE55_RS03800 1043c4c1a0640dd051fe62c1a543358b 416 SUPERFAMILY SSF50939 56 302 7.36E-27 T 22-04-2016 IPR011040 Sialidases JE55_RS03800 1043c4c1a0640dd051fe62c1a543358b 416 SUPERFAMILY SSF50939 352 408 7.36E-27 T 22-04-2016 IPR011040 Sialidases JE55_RS10295 c6326977a16139890b87f472445b2fc6 240 Pfam PF13500 AAA domain 7 211 4.0E-38 T 22-04-2016 JE55_RS10295 c6326977a16139890b87f472445b2fc6 240 PANTHER PTHR21343 8 231 4.8E-73 T 22-04-2016 JE55_RS10295 c6326977a16139890b87f472445b2fc6 240 PANTHER PTHR21343:SF13 8 231 4.8E-73 T 22-04-2016 JE55_RS10295 c6326977a16139890b87f472445b2fc6 240 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 8 178 8.4E-45 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 JE55_RS10295 c6326977a16139890b87f472445b2fc6 240 PIRSF PIRSF006755 5 238 4.8E-60 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 JE55_RS10295 c6326977a16139890b87f472445b2fc6 240 SUPERFAMILY SSF52540 6 216 1.91E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS10295 c6326977a16139890b87f472445b2fc6 240 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 4 223 28.825 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 JE55_RS10295 c6326977a16139890b87f472445b2fc6 240 Gene3D G3DSA:3.40.50.300 6 222 3.1E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07390 086468722b1637da234ce86edac4454c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.304 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 JE55_RS07390 086468722b1637da234ce86edac4454c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 9.8E-45 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 JE55_RS07390 086468722b1637da234ce86edac4454c 103 SUPERFAMILY SSF54999 5 102 1.83E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain JE55_RS07390 086468722b1637da234ce86edac4454c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07390 086468722b1637da234ce86edac4454c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.5E-17 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 JE55_RS07390 086468722b1637da234ce86edac4454c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.5E-17 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 JE55_RS07390 086468722b1637da234ce86edac4454c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.5E-17 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 JE55_RS07390 086468722b1637da234ce86edac4454c 103 PANTHER PTHR11700 1 102 4.5E-48 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 JE55_RS07390 086468722b1637da234ce86edac4454c 103 Gene3D G3DSA:3.30.70.600 4 102 6.8E-42 T 22-04-2016 IPR027486 Ribosomal protein S10 domain JE55_RS07390 086468722b1637da234ce86edac4454c 103 SMART SM01403 7 101 6.3E-55 T 22-04-2016 IPR027486 Ribosomal protein S10 domain JE55_RS07390 086468722b1637da234ce86edac4454c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.7E-34 T 22-04-2016 IPR027486 Ribosomal protein S10 domain JE55_RS15935 ac794953408d35645378fb7a4c7ec3fd 293 PANTHER PTHR30514:SF3 1 277 3.0E-52 T 22-04-2016 JE55_RS15935 ac794953408d35645378fb7a4c7ec3fd 293 Gene3D G3DSA:1.10.10.10 13 91 1.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15935 ac794953408d35645378fb7a4c7ec3fd 293 Pfam PF01380 SIS domain 146 273 2.6E-23 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS15935 ac794953408d35645378fb7a4c7ec3fd 293 Gene3D G3DSA:3.40.50.10490 121 285 9.5E-32 T 22-04-2016 JE55_RS15935 ac794953408d35645378fb7a4c7ec3fd 293 Pfam PF01418 Helix-turn-helix domain, rpiR family 15 84 5.9E-13 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 JE55_RS15935 ac794953408d35645378fb7a4c7ec3fd 293 PANTHER PTHR30514 1 277 3.0E-52 T 22-04-2016 JE55_RS15935 ac794953408d35645378fb7a4c7ec3fd 293 SUPERFAMILY SSF46689 14 89 4.93E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS15935 ac794953408d35645378fb7a4c7ec3fd 293 SUPERFAMILY SSF53697 117 284 2.83E-27 T 22-04-2016 JE55_RS20065 030cb17a3480671d3bc5478254554e7a 502 Pfam PF05272 Virulence-associated protein E 222 414 2.7E-61 T 22-04-2016 IPR007936 Virulence-associated E JE55_RS20065 030cb17a3480671d3bc5478254554e7a 502 PANTHER PTHR34985 187 492 4.9E-34 T 22-04-2016 JE55_RS07070 eb3062918547bf0fc17459d33069cec8 271 Pfam PF05690 Thiazole biosynthesis protein ThiG 12 257 2.5E-105 T 22-04-2016 JE55_RS07070 eb3062918547bf0fc17459d33069cec8 271 SUPERFAMILY SSF110399 8 248 4.84E-80 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 JE55_RS07070 eb3062918547bf0fc17459d33069cec8 271 Gene3D G3DSA:3.20.20.70 10 267 1.2E-51 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS07070 eb3062918547bf0fc17459d33069cec8 271 Hamap MF_00443 Thiazole synthase [thiG]. 9 263 41.833 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 JE55_RS07070 eb3062918547bf0fc17459d33069cec8 271 PANTHER PTHR34266 4 268 3.5E-133 T 22-04-2016 JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1163 22.415 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1154 3.8E-62 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 SUPERFAMILY SSF52540 2 213 1.33E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 SUPERFAMILY SSF52540 1047 1159 1.33E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 PANTHER PTHR18937:SF261 2 1164 8.6E-264 T 22-04-2016 JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 SMART SM00968 518 625 3.1E-15 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1161 0.0 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 Pfam PF06470 SMC proteins Flexible Hinge Domain 520 623 6.4E-8 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 PIRSF PIRSF005719 1 1170 1.4E-252 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 Gene3D G3DSA:3.40.50.300 1011 1163 4.1E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 Gene3D G3DSA:3.40.50.300 2 166 4.1E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 PANTHER PTHR18937 2 1164 8.6E-264 T 22-04-2016 JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 SUPERFAMILY SSF75553 478 672 2.88E-13 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 JE55_RS01240 3938c1759931f3ade8e799bb4c6efcf2 1170 SUPERFAMILY SSF57997 295 498 4.64E-5 T 22-04-2016 JE55_RS01500 45206b878e4383809ed193792957660e 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JE55_RS01500 45206b878e4383809ed193792957660e 112 PANTHER PTHR11938 1 85 2.7E-42 T 22-04-2016 JE55_RS01500 45206b878e4383809ed193792957660e 112 Pfam PF11953 Domain of unknown function (DUF3470) 66 109 3.2E-16 T 22-04-2016 IPR022569 Ferredoxin, C-terminal JE55_RS01500 45206b878e4383809ed193792957660e 112 PANTHER PTHR11938:SF101 1 85 2.7E-42 T 22-04-2016 JE55_RS01500 45206b878e4383809ed193792957660e 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 8.6E-16 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 JE55_RS01500 45206b878e4383809ed193792957660e 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 8.6E-16 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 JE55_RS01500 45206b878e4383809ed193792957660e 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 8.6E-16 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 JE55_RS01500 45206b878e4383809ed193792957660e 112 SUPERFAMILY SSF54862 1 91 4.54E-21 T 22-04-2016 JE55_RS01500 45206b878e4383809ed193792957660e 112 Gene3D G3DSA:3.30.70.20 4 75 4.8E-19 T 22-04-2016 JE55_RS01500 45206b878e4383809ed193792957660e 112 Pfam PF00037 4Fe-4S binding domain 34 56 8.3E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JE55_RS23310 2e64b36abdea76c473cbdbadf1d8519b 396 Gene3D G3DSA:2.40.50.140 165 258 1.5E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS23310 2e64b36abdea76c473cbdbadf1d8519b 396 Pfam PF17191 RecG wedge domain 137 287 4.1E-13 T 22-04-2016 IPR033454 RecG, wedge domain JE55_RS23310 2e64b36abdea76c473cbdbadf1d8519b 396 SUPERFAMILY SSF50249 137 290 9.42E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS05700 a10fc1ff80efc9b624eb286c030ded7b 246 Gene3D G3DSA:1.10.3720.10 24 236 5.1E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS05700 a10fc1ff80efc9b624eb286c030ded7b 246 PANTHER PTHR30085 1 244 5.0E-132 T 22-04-2016 JE55_RS05700 a10fc1ff80efc9b624eb286c030ded7b 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 237 5.6E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS05700 a10fc1ff80efc9b624eb286c030ded7b 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 25 132 4.1E-18 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 JE55_RS05700 a10fc1ff80efc9b624eb286c030ded7b 246 SUPERFAMILY SSF161098 25 223 3.92E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS05700 a10fc1ff80efc9b624eb286c030ded7b 246 PANTHER PTHR30085:SF4 1 244 5.0E-132 T 22-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 JE55_RS03020 db2ac0c5f208b37c5fee2752bb437ece 438 SUPERFAMILY SSF109709 135 220 3.66E-7 T 22-04-2016 JE55_RS03020 db2ac0c5f208b37c5fee2752bb437ece 438 Gene3D G3DSA:3.90.1530.10 33 138 5.2E-5 T 22-04-2016 JE55_RS03020 db2ac0c5f208b37c5fee2752bb437ece 438 SUPERFAMILY SSF110849 29 134 2.44E-12 T 22-04-2016 IPR003115 ParB/Sulfiredoxin JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 377 3.7E-157 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 Gene3D G3DSA:3.40.630.10 320 378 5.9E-73 T 22-04-2016 JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 Gene3D G3DSA:3.40.630.10 2 191 5.9E-73 T 22-04-2016 JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 379 51.39 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 SUPERFAMILY SSF55031 183 292 1.64E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 Pfam PF07687 Peptidase dimerisation domain 179 286 5.7E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 SUPERFAMILY SSF53187 296 377 2.19E-62 T 22-04-2016 JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 SUPERFAMILY SSF53187 3 182 2.19E-62 T 22-04-2016 JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 65 74 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 Gene3D G3DSA:3.30.70.360 192 292 8.0E-35 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 Pfam PF01546 Peptidase family M20/M25/M40 66 375 1.7E-43 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 JE55_RS01265 ee963f2464fdcba36f95825189bde6ba 379 PANTHER PTHR11014 5 379 1.1E-83 T 22-04-2016 JE55_RS03810 c5b0b5abd3520f5f3bff47e086334099 129 Pfam PF11162 Protein of unknown function (DUF2946) 10 124 4.6E-14 T 22-04-2016 IPR021333 Protein of unknown function DUF2946 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PANTHER PTHR10422 31 572 3.0E-229 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 92 115 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 45 70 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 193 211 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 406 425 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 161 173 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 273 294 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 378 396 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 343 364 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 456 477 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 119 143 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 222 241 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PRINTS PR01165 Cytochrome c oxidase subunit I signature 319 334 1.2E-81 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 54 500 1.7E-135 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 Pfam PF00510 Cytochrome c oxidase subunit III 700 871 5.8E-25 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 Gene3D G3DSA:1.20.210.10 36 562 3.5E-168 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 PANTHER PTHR10422:SF6 31 572 3.0E-229 T 22-04-2016 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 SUPERFAMILY SSF81442 42 552 3.79E-161 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 46 551 5.2E-212 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 Gene3D G3DSA:1.20.120.80 696 872 2.6E-47 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 SUPERFAMILY SSF81452 596 656 1.44E-53 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 JE55_RS12020 2acde89e7e6b7e01b9a57e1f43c93ea3 879 SUPERFAMILY SSF81452 689 871 1.44E-53 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 JE55_RS06235 04eae63bbce2a08fb78be3170a74df07 149 Gene3D G3DSA:3.90.79.10 19 144 1.6E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS06235 04eae63bbce2a08fb78be3170a74df07 149 PANTHER PTHR22769:SF35 16 143 1.9E-22 T 22-04-2016 JE55_RS06235 04eae63bbce2a08fb78be3170a74df07 149 PANTHER PTHR22769 16 143 1.9E-22 T 22-04-2016 JE55_RS06235 04eae63bbce2a08fb78be3170a74df07 149 SUPERFAMILY SSF55811 16 123 1.9E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS06235 04eae63bbce2a08fb78be3170a74df07 149 Pfam PF00293 NUDIX domain 21 127 9.4E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 JE55_RS06235 04eae63bbce2a08fb78be3170a74df07 149 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 JE55_RS06235 04eae63bbce2a08fb78be3170a74df07 149 PRINTS PR00502 NUDIX hydrolase family signature 48 62 7.1E-9 T 22-04-2016 IPR020476 NUDIX hydrolase JE55_RS06235 04eae63bbce2a08fb78be3170a74df07 149 PRINTS PR00502 NUDIX hydrolase family signature 62 77 7.1E-9 T 22-04-2016 IPR020476 NUDIX hydrolase JE55_RS05080 1c3683c0140e803eb8a423aeca1476df 387 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 170 3.8E-16 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 JE55_RS05080 1c3683c0140e803eb8a423aeca1476df 387 PANTHER PTHR33619:SF3 76 100 4.3E-33 T 22-04-2016 JE55_RS05080 1c3683c0140e803eb8a423aeca1476df 387 PANTHER PTHR33619:SF3 122 375 4.3E-33 T 22-04-2016 JE55_RS05080 1c3683c0140e803eb8a423aeca1476df 387 PANTHER PTHR33619 76 100 4.3E-33 T 22-04-2016 JE55_RS05080 1c3683c0140e803eb8a423aeca1476df 387 PANTHER PTHR33619 122 375 4.3E-33 T 22-04-2016 JE55_RS05080 1c3683c0140e803eb8a423aeca1476df 387 Gene3D G3DSA:3.10.560.10 166 246 8.9E-18 T 22-04-2016 JE55_RS05080 1c3683c0140e803eb8a423aeca1476df 387 Gene3D G3DSA:3.10.560.10 247 358 2.6E-25 T 22-04-2016 JE55_RS05080 1c3683c0140e803eb8a423aeca1476df 387 Gene3D G3DSA:3.30.1950.10 84 165 7.5E-22 T 22-04-2016 JE55_RS08825 1b5883af3094cb0e25b5932f87abf786 366 Pfam PF13609 Gram-negative porin 5 327 1.9E-51 T 22-04-2016 JE55_RS08825 1b5883af3094cb0e25b5932f87abf786 366 Gene3D G3DSA:2.40.160.10 23 366 5.7E-80 T 22-04-2016 IPR023614 Porin domain JE55_RS08825 1b5883af3094cb0e25b5932f87abf786 366 SUPERFAMILY SSF56935 22 366 4.88E-66 T 22-04-2016 JE55_RS08825 1b5883af3094cb0e25b5932f87abf786 366 PRINTS PR00184 Neisseria sp. porin signature 204 221 7.1E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS08825 1b5883af3094cb0e25b5932f87abf786 366 PRINTS PR00184 Neisseria sp. porin signature 304 328 7.1E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS08825 1b5883af3094cb0e25b5932f87abf786 366 PRINTS PR00184 Neisseria sp. porin signature 53 78 7.1E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS00105 9515b45d7c75b7a09aa7ac3579f7a193 382 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 12 315 3.8E-85 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 JE55_RS00105 9515b45d7c75b7a09aa7ac3579f7a193 382 SUPERFAMILY SSF55681 5 311 1.81E-59 T 22-04-2016 JE55_RS00105 9515b45d7c75b7a09aa7ac3579f7a193 382 Gene3D G3DSA:3.30.930.10 17 313 1.2E-66 T 22-04-2016 JE55_RS00105 9515b45d7c75b7a09aa7ac3579f7a193 382 PANTHER PTHR11476:SF5 12 316 4.3E-47 T 22-04-2016 JE55_RS00105 9515b45d7c75b7a09aa7ac3579f7a193 382 PIRSF PIRSF001549 3 329 1.1E-41 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 JE55_RS00105 9515b45d7c75b7a09aa7ac3579f7a193 382 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 364 34.236 T 22-04-2016 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 UniPathway: UPA00031 JE55_RS00105 9515b45d7c75b7a09aa7ac3579f7a193 382 PANTHER PTHR11476 12 316 4.3E-47 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 JE55_RS00105 9515b45d7c75b7a09aa7ac3579f7a193 382 Pfam PF13393 Histidyl-tRNA synthetase 10 313 2.5E-117 T 22-04-2016 JE55_RS13805 9a0f9761b07b380c6b138aa7ab82864c 119 PANTHER PTHR33751 34 113 1.3E-18 T 22-04-2016 JE55_RS13805 9a0f9761b07b380c6b138aa7ab82864c 119 PANTHER PTHR33751:SF3 34 113 1.3E-18 T 22-04-2016 JE55_RS13805 9a0f9761b07b380c6b138aa7ab82864c 119 Pfam PF00034 Cytochrome c 38 106 7.7E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS13805 9a0f9761b07b380c6b138aa7ab82864c 119 Gene3D G3DSA:1.10.760.10 28 109 8.6E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS13805 9a0f9761b07b380c6b138aa7ab82864c 119 SUPERFAMILY SSF46626 5 115 3.01E-19 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS17250 48e3954e128e00480321dfc105db61ad 234 PANTHER PTHR11260:SF178 21 231 9.4E-66 T 22-04-2016 JE55_RS17250 48e3954e128e00480321dfc105db61ad 234 Pfam PF00043 Glutathione S-transferase, C-terminal domain 142 222 3.0E-8 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal JE55_RS17250 48e3954e128e00480321dfc105db61ad 234 Gene3D G3DSA:3.40.30.10 7 101 1.9E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS17250 48e3954e128e00480321dfc105db61ad 234 SUPERFAMILY SSF52833 11 102 8.7E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS17250 48e3954e128e00480321dfc105db61ad 234 PANTHER PTHR11260 21 231 9.4E-66 T 22-04-2016 JE55_RS17250 48e3954e128e00480321dfc105db61ad 234 Pfam PF02798 Glutathione S-transferase, N-terminal domain 21 99 4.5E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 JE55_RS17250 48e3954e128e00480321dfc105db61ad 234 Gene3D G3DSA:1.20.1050.10 102 226 7.6E-39 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS17250 48e3954e128e00480321dfc105db61ad 234 SUPERFAMILY SSF47616 102 230 2.23E-32 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like JE55_RS17540 9ebd294a7b94b12bfd75ffea60e0818a 416 Pfam PF11925 Protein of unknown function (DUF3443) 66 410 1.6E-86 T 22-04-2016 IPR021847 Protein of unknown function DUF3443 JE55_RS16610 5d31dae5fb54ba45ffe595e9ec2882c9 255 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 40 224 6.3E-55 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 JE55_RS16610 5d31dae5fb54ba45ffe595e9ec2882c9 255 SUPERFAMILY SSF55729 2 234 6.89E-83 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS16610 5d31dae5fb54ba45ffe595e9ec2882c9 255 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 36 210 2.0E-70 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 JE55_RS16610 5d31dae5fb54ba45ffe595e9ec2882c9 255 PANTHER PTHR30098 24 254 2.6E-64 T 22-04-2016 JE55_RS16610 5d31dae5fb54ba45ffe595e9ec2882c9 255 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 255 96.68 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 JE55_RS04320 e297fbc5f5ee4b6288b34de44335c106 294 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 22 293 6.6E-120 T 22-04-2016 IPR021266 Kdo hydroxylase JE55_RS08925 c83bc93a7c5816c2298f779afde1e034 377 Gene3D G3DSA:3.30.1540.10 226 293 1.0E-8 T 22-04-2016 JE55_RS08925 c83bc93a7c5816c2298f779afde1e034 377 PANTHER PTHR24023:SF545 40 366 6.5E-86 T 22-04-2016 JE55_RS08925 c83bc93a7c5816c2298f779afde1e034 377 Gene3D G3DSA:3.40.50.10540 294 376 6.2E-96 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS08925 c83bc93a7c5816c2298f779afde1e034 377 Gene3D G3DSA:3.40.50.10540 2 208 6.2E-96 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS08925 c83bc93a7c5816c2298f779afde1e034 377 SUPERFAMILY SSF89796 1 376 1.11E-112 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS08925 c83bc93a7c5816c2298f779afde1e034 377 PANTHER PTHR24023 40 366 6.5E-86 T 22-04-2016 JE55_RS08925 c83bc93a7c5816c2298f779afde1e034 377 Pfam PF02515 CoA-transferase family III 4 355 1.8E-79 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 JE55_RS02085 551401797a66bf2cfe6362fe1a314171 553 Gene3D G3DSA:3.40.50.880 291 546 1.4E-97 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS02085 551401797a66bf2cfe6362fe1a314171 553 TIGRFAM TIGR00337 PyrG: CTP synthase 1 540 3.1E-240 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 JE55_RS02085 551401797a66bf2cfe6362fe1a314171 553 SUPERFAMILY SSF52540 2 271 5.69E-121 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02085 551401797a66bf2cfe6362fe1a314171 553 Hamap MF_01227 CTP synthase [pyrG]. 2 545 51.121 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 JE55_RS02085 551401797a66bf2cfe6362fe1a314171 553 Pfam PF00117 Glutamine amidotransferase class-I 305 540 3.2E-56 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 JE55_RS02085 551401797a66bf2cfe6362fe1a314171 553 Gene3D G3DSA:3.40.50.300 1 288 5.3E-135 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02085 551401797a66bf2cfe6362fe1a314171 553 Pfam PF06418 CTP synthase N-terminus 3 270 6.1E-127 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 JE55_RS02085 551401797a66bf2cfe6362fe1a314171 553 SUPERFAMILY SSF52317 292 546 3.99E-84 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS02085 551401797a66bf2cfe6362fe1a314171 553 PANTHER PTHR11550 1 542 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 JE55_RS05250 bada800594c24d0724d732b6896b0074 186 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 24 179 3.0E-83 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 JE55_RS05250 bada800594c24d0724d732b6896b0074 186 PANTHER PTHR12213 4 179 2.3E-69 T 22-04-2016 JE55_RS05250 bada800594c24d0724d732b6896b0074 186 SUPERFAMILY SSF89028 7 178 2.55E-60 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 JE55_RS05250 bada800594c24d0724d732b6896b0074 186 PANTHER PTHR12213:SF0 4 179 2.3E-69 T 22-04-2016 JE55_RS05250 bada800594c24d0724d732b6896b0074 186 Gene3D G3DSA:1.20.1200.10 17 180 6.8E-66 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 JE55_RS05250 bada800594c24d0724d732b6896b0074 186 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 10 178 1.4E-61 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 JE55_RS05250 bada800594c24d0724d732b6896b0074 186 Pfam PF01923 Cobalamin adenosyltransferase 8 165 3.3E-57 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 JE55_RS07805 7cafe18b07ecd44fc5c2300a1baceeeb 211 SUPERFAMILY SSF50685 99 188 5.23E-14 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain JE55_RS07805 7cafe18b07ecd44fc5c2300a1baceeeb 211 PANTHER PTHR34183:SF1 93 204 3.1E-54 T 22-04-2016 JE55_RS07805 7cafe18b07ecd44fc5c2300a1baceeeb 211 Gene3D G3DSA:2.40.40.10 138 186 6.1E-7 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain JE55_RS07805 7cafe18b07ecd44fc5c2300a1baceeeb 211 PANTHER PTHR34183 93 204 3.1E-54 T 22-04-2016 JE55_RS07805 7cafe18b07ecd44fc5c2300a1baceeeb 211 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 101 192 2.0E-44 T 22-04-2016 IPR012997 Rare lipoprotein A JE55_RS07805 7cafe18b07ecd44fc5c2300a1baceeeb 211 Pfam PF03330 Lytic transglycolase 99 188 9.1E-28 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain JE55_RS10700 9eb0b67ad03c33fc286df3857c548456 86 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 6.3E-33 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 JE55_RS10700 9eb0b67ad03c33fc286df3857c548456 86 PRINTS PR00160 Glutaredoxin signature 61 74 1.2E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup JE55_RS10700 9eb0b67ad03c33fc286df3857c548456 86 PRINTS PR00160 Glutaredoxin signature 47 60 1.2E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup JE55_RS10700 9eb0b67ad03c33fc286df3857c548456 86 PRINTS PR00160 Glutaredoxin signature 4 22 1.2E-15 T 22-04-2016 IPR014025 Glutaredoxin subgroup JE55_RS10700 9eb0b67ad03c33fc286df3857c548456 86 Gene3D G3DSA:3.40.30.10 2 85 2.6E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10700 9eb0b67ad03c33fc286df3857c548456 86 PANTHER PTHR10168 2 86 1.5E-24 T 22-04-2016 JE55_RS10700 9eb0b67ad03c33fc286df3857c548456 86 Pfam PF00462 Glutaredoxin 4 64 7.7E-20 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 JE55_RS10700 9eb0b67ad03c33fc286df3857c548456 86 SUPERFAMILY SSF52833 2 84 6.8E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10700 9eb0b67ad03c33fc286df3857c548456 86 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 JE55_RS13440 715980a62e4cf99cfee1911889646eae 237 PANTHER PTHR30450:SF5 1 237 5.7E-155 T 22-04-2016 JE55_RS13440 715980a62e4cf99cfee1911889646eae 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 2.0E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 JE55_RS13440 715980a62e4cf99cfee1911889646eae 237 PANTHER PTHR30450 1 237 5.7E-155 T 22-04-2016 JE55_RS13440 715980a62e4cf99cfee1911889646eae 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 228 5.6E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS13440 715980a62e4cf99cfee1911889646eae 237 Gene3D G3DSA:1.10.3720.10 20 228 4.0E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS13440 715980a62e4cf99cfee1911889646eae 237 SUPERFAMILY SSF161098 17 222 2.09E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS08105 699ecb388fe3b80b16c7b09fe629b13e 224 Pfam PF05643 Putative bacterial lipoprotein (DUF799) 14 217 4.9E-90 T 22-04-2016 IPR008517 Protein of unknown function DUF799 JE55_RS14275 343158c493187ffaefcc7faf930f091c 181 Pfam PF01219 Prokaryotic diacylglycerol kinase 70 171 2.5E-31 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 JE55_RS14275 343158c493187ffaefcc7faf930f091c 181 PANTHER PTHR34299 51 179 2.9E-33 T 22-04-2016 JE55_RS14275 343158c493187ffaefcc7faf930f091c 181 Gene3D G3DSA:1.10.3830.10 57 175 3.6E-42 T 22-04-2016 JE55_RS14275 343158c493187ffaefcc7faf930f091c 181 PANTHER PTHR34299:SF1 51 179 2.9E-33 T 22-04-2016 JE55_RS09435 645393fe0095abcc3e9214b3c8110201 237 PANTHER PTHR38765 1 234 3.9E-23 T 22-04-2016 JE55_RS09435 645393fe0095abcc3e9214b3c8110201 237 Pfam PF04340 Protein of unknown function, DUF484 2 233 5.1E-27 T 22-04-2016 IPR007435 Protein of unknown function DUF484 JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 268 6.8E-77 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 Gene3D G3DSA:1.10.10.160 112 184 2.0E-22 T 22-04-2016 IPR013986 DExx box DNA helicase domain JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 PANTHER PTHR11070 563 677 4.7E-213 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 PANTHER PTHR11070 1 504 4.7E-213 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 Gene3D G3DSA:3.40.50.300 3 108 1.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 Gene3D G3DSA:3.40.50.300 185 282 1.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 Gene3D G3DSA:3.40.50.300 586 678 1.9E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 Gene3D G3DSA:3.40.50.300 283 384 1.9E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 SUPERFAMILY SSF52540 587 675 3.12E-178 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 SUPERFAMILY SSF52540 1 508 3.12E-178 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 Gene3D G3DSA:1.10.486.10 385 508 2.7E-44 T 22-04-2016 JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 Gene3D G3DSA:1.10.486.10 557 575 2.7E-44 T 22-04-2016 JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 PANTHER PTHR11070:SF7 563 677 4.7E-213 T 22-04-2016 JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 PANTHER PTHR11070:SF7 1 504 4.7E-213 T 22-04-2016 JE55_RS15990 b5ee6cc1c37d99779717d655811fdfe6 787 Pfam PF13361 UvrD-like helicase C-terminal domain 274 650 4.2E-72 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 JE55_RS13210 cb2892164d39cfc1485b35030bd94963 350 PANTHER PTHR11751 11 331 2.7E-39 T 22-04-2016 JE55_RS13210 cb2892164d39cfc1485b35030bd94963 350 PANTHER PTHR11751:SF3 11 331 2.7E-39 T 22-04-2016 JE55_RS13210 cb2892164d39cfc1485b35030bd94963 350 Pfam PF00155 Aminotransferase class I and II 73 320 5.5E-22 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS13210 cb2892164d39cfc1485b35030bd94963 350 Gene3D G3DSA:3.40.640.10 46 245 5.2E-38 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS13210 cb2892164d39cfc1485b35030bd94963 350 SUPERFAMILY SSF53383 5 332 8.49E-50 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS13210 cb2892164d39cfc1485b35030bd94963 350 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 8 329 1.6E-101 T 22-04-2016 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443|UniPathway: UPA00148 JE55_RS02405 ab0825ea125a60dc9d4077bd3852d935 263 Gene3D G3DSA:3.40.50.880 10 255 8.1E-45 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS02405 ab0825ea125a60dc9d4077bd3852d935 263 PANTHER PTHR11922 32 75 1.5E-55 T 22-04-2016 JE55_RS02405 ab0825ea125a60dc9d4077bd3852d935 263 PANTHER PTHR11922 91 255 1.5E-55 T 22-04-2016 JE55_RS02405 ab0825ea125a60dc9d4077bd3852d935 263 PANTHER PTHR11922:SF18 32 75 1.5E-55 T 22-04-2016 JE55_RS02405 ab0825ea125a60dc9d4077bd3852d935 263 PANTHER PTHR11922:SF18 91 255 1.5E-55 T 22-04-2016 JE55_RS02405 ab0825ea125a60dc9d4077bd3852d935 263 SUPERFAMILY SSF52317 10 253 1.63E-39 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS02405 ab0825ea125a60dc9d4077bd3852d935 263 Pfam PF07722 Peptidase C26 11 229 9.7E-70 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 PRINTS PR00981 Seryl-tRNA synthetase signature 355 371 1.0E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 PRINTS PR00981 Seryl-tRNA synthetase signature 320 333 1.0E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 PRINTS PR00981 Seryl-tRNA synthetase signature 268 280 1.0E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 PRINTS PR00981 Seryl-tRNA synthetase signature 337 353 1.0E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 PRINTS PR00981 Seryl-tRNA synthetase signature 280 293 1.0E-32 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 8.3E-32 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 Gene3D G3DSA:3.30.930.10 105 424 7.1E-142 T 22-04-2016 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 SUPERFAMILY SSF46589 1 112 1.36E-30 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 SUPERFAMILY SSF55681 116 423 1.05E-99 T 22-04-2016 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 PIRSF PIRSF001529 1 429 2.4E-180 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 Gene3D G3DSA:1.10.287.40 1 104 2.7E-29 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 224 403 1.6E-32 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 PANTHER PTHR11778 1 432 2.2E-214 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 425 39.897 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 JE55_RS03985 fc35b8063516423d58a78aa01f7211f5 433 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 420 1.4E-162 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 JE55_RS09390 6bd25448c0d7ed07334addbb243eca0e 83 Pfam PF14375 Cysteine-rich CWC 15 59 1.5E-7 T 22-04-2016 IPR032720 Cysteine-rich CWC JE55_RS16765 ff638fa41ee8299d9a4c72273d1c71d6 344 Gene3D G3DSA:1.10.3720.10 60 318 1.7E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16765 ff638fa41ee8299d9a4c72273d1c71d6 344 PANTHER PTHR30406:SF1 31 324 3.8E-163 T 22-04-2016 JE55_RS16765 ff638fa41ee8299d9a4c72273d1c71d6 344 PANTHER PTHR30406 31 324 3.8E-163 T 22-04-2016 JE55_RS16765 ff638fa41ee8299d9a4c72273d1c71d6 344 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 315 1.6E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16765 ff638fa41ee8299d9a4c72273d1c71d6 344 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 59 313 9.5E-100 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 JE55_RS16765 ff638fa41ee8299d9a4c72273d1c71d6 344 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 59 316 1.5E-127 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 JE55_RS16765 ff638fa41ee8299d9a4c72273d1c71d6 344 SUPERFAMILY SSF161098 57 310 3.79E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS08710 402f2f98dd18f17b5dd4a2ced0bfb55e 165 Gene3D G3DSA:1.10.10.10 11 149 8.3E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08710 402f2f98dd18f17b5dd4a2ced0bfb55e 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 3.5E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS08710 402f2f98dd18f17b5dd4a2ced0bfb55e 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 3.5E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS08710 402f2f98dd18f17b5dd4a2ced0bfb55e 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 3.5E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS08710 402f2f98dd18f17b5dd4a2ced0bfb55e 165 PRINTS PR00598 Bacterial regulatory protein MarR family signature 125 145 3.5E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS08710 402f2f98dd18f17b5dd4a2ced0bfb55e 165 ProSitePatterns PS01117 MarR-type HTH domain signature. 74 108 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site JE55_RS08710 402f2f98dd18f17b5dd4a2ced0bfb55e 165 SUPERFAMILY SSF46785 9 150 1.66E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08710 402f2f98dd18f17b5dd4a2ced0bfb55e 165 PANTHER PTHR33164 11 159 1.2E-24 T 22-04-2016 JE55_RS08710 402f2f98dd18f17b5dd4a2ced0bfb55e 165 Pfam PF01047 MarR family 42 99 4.9E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS08710 402f2f98dd18f17b5dd4a2ced0bfb55e 165 SMART SM00347 35 135 3.7E-23 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS31410 d8603be77456879d2ad80230b09ea3f7 202 SUPERFAMILY SSF53187 1 187 4.81E-39 T 22-04-2016 JE55_RS31410 d8603be77456879d2ad80230b09ea3f7 202 Pfam PF00246 Zinc carboxypeptidase 3 122 7.3E-9 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 JE55_RS31410 d8603be77456879d2ad80230b09ea3f7 202 Gene3D G3DSA:3.40.630.10 1 182 7.5E-25 T 22-04-2016 JE55_RS31410 d8603be77456879d2ad80230b09ea3f7 202 PANTHER PTHR12756 1 144 9.4E-59 T 22-04-2016 JE55_RS31410 d8603be77456879d2ad80230b09ea3f7 202 PANTHER PTHR12756:SF18 1 144 9.4E-59 T 22-04-2016 JE55_RS13130 979091df20db9551ec02f8ad790fa4ee 107 Gene3D G3DSA:1.10.760.10 26 106 1.1E-29 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS13130 979091df20db9551ec02f8ad790fa4ee 107 SUPERFAMILY SSF46626 25 105 2.82E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS13130 979091df20db9551ec02f8ad790fa4ee 107 Pfam PF00034 Cytochrome c 25 107 6.9E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS13130 979091df20db9551ec02f8ad790fa4ee 107 PRINTS PR00606 Class ID cytochrome C signature 68 81 3.0E-17 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 JE55_RS13130 979091df20db9551ec02f8ad790fa4ee 107 PRINTS PR00606 Class ID cytochrome C signature 30 43 3.0E-17 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 JE55_RS13130 979091df20db9551ec02f8ad790fa4ee 107 PRINTS PR00606 Class ID cytochrome C signature 45 58 3.0E-17 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 JE55_RS13130 979091df20db9551ec02f8ad790fa4ee 107 PRINTS PR00606 Class ID cytochrome C signature 95 105 3.0E-17 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 JE55_RS13130 979091df20db9551ec02f8ad790fa4ee 107 PRINTS PR00606 Class ID cytochrome C signature 83 93 3.0E-17 T 22-04-2016 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 JE55_RS07025 e473982301db7a4f69decf98b187a621 251 PANTHER PTHR30413:SF2 4 250 2.3E-63 T 22-04-2016 JE55_RS07025 e473982301db7a4f69decf98b187a621 251 PIRSF PIRSF006648 4 248 5.7E-25 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS07025 e473982301db7a4f69decf98b187a621 251 Pfam PF01061 ABC-2 type transporter 4 214 4.7E-36 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 JE55_RS07025 e473982301db7a4f69decf98b187a621 251 PANTHER PTHR30413 4 250 2.3E-63 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS07025 e473982301db7a4f69decf98b187a621 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 171 190 9.1E-10 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS07025 e473982301db7a4f69decf98b187a621 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 53 75 9.1E-10 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS07025 e473982301db7a4f69decf98b187a621 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 191 210 9.1E-10 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS09960 60b454e23f8bbb159e93e5d9f073df94 165 PANTHER PTHR30373:SF3 10 151 3.8E-55 T 22-04-2016 JE55_RS09960 60b454e23f8bbb159e93e5d9f073df94 165 PANTHER PTHR30373 10 151 3.8E-55 T 22-04-2016 JE55_RS09960 60b454e23f8bbb159e93e5d9f073df94 165 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 21 142 1.1E-12 T 22-04-2016 IPR007621 TPM domain JE55_RS08850 c63288e30468b0c1bd34c03459169337 292 PANTHER PTHR11795 1 280 8.4E-35 T 22-04-2016 JE55_RS08850 c63288e30468b0c1bd34c03459169337 292 PANTHER PTHR11795:SF398 1 280 8.4E-35 T 22-04-2016 JE55_RS08850 c63288e30468b0c1bd34c03459169337 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 276 9.3E-30 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS02515 dae4452f00bc4414ec479495992ccaf8 583 SUPERFAMILY SSF51998 37 569 1.53E-153 T 22-04-2016 JE55_RS02515 dae4452f00bc4414ec479495992ccaf8 583 Gene3D G3DSA:3.20.70.20 42 569 8.1E-194 T 22-04-2016 JE55_RS02515 dae4452f00bc4414ec479495992ccaf8 583 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 37 567 4.0E-168 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 JE55_RS02515 dae4452f00bc4414ec479495992ccaf8 583 PANTHER PTHR21075 16 569 2.7E-187 T 22-04-2016 JE55_RS02515 dae4452f00bc4414ec479495992ccaf8 583 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 36 568 2.9E-134 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 JE55_RS11400 5510f5c879a3694c3fd6bb9abc005283 413 PANTHER PTHR12526 1 130 8.6E-45 T 22-04-2016 JE55_RS11400 5510f5c879a3694c3fd6bb9abc005283 413 Gene3D G3DSA:3.40.50.2000 195 330 5.3E-18 T 22-04-2016 JE55_RS11400 5510f5c879a3694c3fd6bb9abc005283 413 PANTHER PTHR12526 148 331 8.6E-45 T 22-04-2016 JE55_RS11400 5510f5c879a3694c3fd6bb9abc005283 413 Pfam PF13439 Glycosyltransferase Family 4 13 189 5.5E-11 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JE55_RS11400 5510f5c879a3694c3fd6bb9abc005283 413 PANTHER PTHR12526:SF380 148 331 8.6E-45 T 22-04-2016 JE55_RS11400 5510f5c879a3694c3fd6bb9abc005283 413 Pfam PF00534 Glycosyl transferases group 1 194 347 6.5E-26 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS11400 5510f5c879a3694c3fd6bb9abc005283 413 PANTHER PTHR12526:SF380 1 130 8.6E-45 T 22-04-2016 JE55_RS11400 5510f5c879a3694c3fd6bb9abc005283 413 SUPERFAMILY SSF53756 2 356 1.23E-59 T 22-04-2016 JE55_RS04985 4123384fa2ca428375a3f72016f919d7 305 PANTHER PTHR33694 11 304 2.3E-48 T 22-04-2016 JE55_RS04985 4123384fa2ca428375a3f72016f919d7 305 PANTHER PTHR33694:SF1 11 304 2.3E-48 T 22-04-2016 JE55_RS04985 4123384fa2ca428375a3f72016f919d7 305 Gene3D G3DSA:3.30.1700.10 140 298 1.7E-30 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 JE55_RS04985 4123384fa2ca428375a3f72016f919d7 305 SUPERFAMILY SSF54211 10 137 4.17E-29 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS04985 4123384fa2ca428375a3f72016f919d7 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 11 291 1.0E-70 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 JE55_RS04985 4123384fa2ca428375a3f72016f919d7 305 Gene3D G3DSA:3.30.230.20 10 137 1.8E-37 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 JE55_RS04985 4123384fa2ca428375a3f72016f919d7 305 SUPERFAMILY SSF54211 156 293 1.52E-26 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS09445 d06e2ed678b51549859d3d7d0458fffb 294 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 285 1.6E-50 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 JE55_RS09445 d06e2ed678b51549859d3d7d0458fffb 294 PIRSF PIRSF026649 2 294 9.1E-76 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 JE55_RS09445 d06e2ed678b51549859d3d7d0458fffb 294 PANTHER PTHR30606 9 294 1.9E-67 T 22-04-2016 JE55_RS09445 d06e2ed678b51549859d3d7d0458fffb 294 PANTHER PTHR30606:SF5 9 294 1.9E-67 T 22-04-2016 JE55_RS29105 7c8fc870838722c2dee7a0890c78eb9c 289 SUPERFAMILY SSF159501 2 274 1.05E-65 T 22-04-2016 JE55_RS29105 7c8fc870838722c2dee7a0890c78eb9c 289 PANTHER PTHR31299 7 280 1.1E-53 T 22-04-2016 JE55_RS29105 7c8fc870838722c2dee7a0890c78eb9c 289 Gene3D G3DSA:3.40.1660.10 261 276 3.3E-17 T 22-04-2016 JE55_RS29105 7c8fc870838722c2dee7a0890c78eb9c 289 Gene3D G3DSA:3.40.1660.10 2 40 3.3E-17 T 22-04-2016 JE55_RS29105 7c8fc870838722c2dee7a0890c78eb9c 289 Pfam PF05139 Erythromycin esterase 40 278 2.6E-50 T 22-04-2016 IPR007815 Erythromycin esterase GO:0046677 JE55_RS29105 7c8fc870838722c2dee7a0890c78eb9c 289 Gene3D G3DSA:3.30.1870.10 41 122 7.5E-18 T 22-04-2016 JE55_RS29105 7c8fc870838722c2dee7a0890c78eb9c 289 PANTHER PTHR31299:SF0 7 280 1.1E-53 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 SUPERFAMILY SSF82693 139 184 1.52E-22 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 SUPERFAMILY SSF82693 270 326 1.52E-22 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 SUPERFAMILY SSF82693 798 842 1.91E-12 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 SUPERFAMILY SSF82693 670 710 1.91E-12 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 Gene3D G3DSA:3.30.2090.10 184 268 3.2E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 SUPERFAMILY SSF82714 713 795 4.71E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 PANTHER PTHR32063 3 1030 0.0 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 Gene3D G3DSA:3.30.70.1430 42 143 1.5E-24 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 PRINTS PR00702 Acriflavin resistance protein family signature 387 411 2.3E-69 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 2.3E-69 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 2.3E-69 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.3E-69 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 PRINTS PR00702 Acriflavin resistance protein family signature 332 355 2.3E-69 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 PRINTS PR00702 Acriflavin resistance protein family signature 359 380 2.3E-69 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.3E-69 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 PRINTS PR00702 Acriflavin resistance protein family signature 614 628 2.3E-69 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 2.3E-69 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 PANTHER PTHR32063:SF30 3 1030 0.0 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 Gene3D G3DSA:3.30.2090.10 712 794 1.8E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 Pfam PF00873 AcrB/AcrD/AcrF family 6 1018 2.7E-299 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 SUPERFAMILY SSF82714 185 268 7.32E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 SUPERFAMILY SSF82866 821 1018 9.02E-42 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 Gene3D G3DSA:1.10.3850.10 278 493 1.2E-56 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 Gene3D G3DSA:1.10.3850.10 804 1019 4.5E-53 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 SUPERFAMILY SSF82693 42 135 7.06E-19 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 Gene3D G3DSA:3.30.70.1430 562 652 1.2E-9 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 SUPERFAMILY SSF82693 559 656 1.08E-14 T 22-04-2016 JE55_RS01630 b7a8591033ff7ef23283c36e616c6199 1048 SUPERFAMILY SSF82866 292 493 6.54E-46 T 22-04-2016 JE55_RS16575 ed2e0ca3875ffa5def304272db340cc7 231 SUPERFAMILY SSF100950 1 150 1.03E-41 T 22-04-2016 JE55_RS16575 ed2e0ca3875ffa5def304272db340cc7 231 Gene3D G3DSA:3.40.50.1360 1 140 2.0E-53 T 22-04-2016 JE55_RS16575 ed2e0ca3875ffa5def304272db340cc7 231 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 226 32.857 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 JE55_RS16575 ed2e0ca3875ffa5def304272db340cc7 231 SUPERFAMILY SSF75445 130 207 1.31E-22 T 22-04-2016 JE55_RS16575 ed2e0ca3875ffa5def304272db340cc7 231 Gene3D G3DSA:3.30.70.260 141 205 1.6E-26 T 22-04-2016 JE55_RS16575 ed2e0ca3875ffa5def304272db340cc7 231 PANTHER PTHR11934:SF11 1 231 1.8E-112 T 22-04-2016 JE55_RS16575 ed2e0ca3875ffa5def304272db340cc7 231 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 13 223 1.0E-66 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 JE55_RS16575 ed2e0ca3875ffa5def304272db340cc7 231 PANTHER PTHR11934 1 231 1.8E-112 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 JE55_RS16575 ed2e0ca3875ffa5def304272db340cc7 231 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 222 2.3E-57 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 JE55_RS00460 8a6fe7e041890c2d716822de337b593b 303 Gene3D G3DSA:1.10.10.10 3 84 1.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00460 8a6fe7e041890c2d716822de337b593b 303 PANTHER PTHR30537 1 300 4.7E-106 T 22-04-2016 JE55_RS00460 8a6fe7e041890c2d716822de337b593b 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.7E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS00460 8a6fe7e041890c2d716822de337b593b 303 SUPERFAMILY SSF53850 91 297 1.03E-43 T 22-04-2016 JE55_RS00460 8a6fe7e041890c2d716822de337b593b 303 Gene3D G3DSA:3.40.190.10 92 176 8.3E-21 T 22-04-2016 JE55_RS00460 8a6fe7e041890c2d716822de337b593b 303 PANTHER PTHR30537:SF5 1 300 4.7E-106 T 22-04-2016 JE55_RS00460 8a6fe7e041890c2d716822de337b593b 303 Gene3D G3DSA:3.40.190.10 177 261 4.3E-21 T 22-04-2016 JE55_RS00460 8a6fe7e041890c2d716822de337b593b 303 SUPERFAMILY SSF46785 3 109 4.14E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00460 8a6fe7e041890c2d716822de337b593b 303 Pfam PF03466 LysR substrate binding domain 89 292 1.8E-40 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS14965 52ca72241fe8f3338469fe5c6fe6fb3e 490 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 81 3.5E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS14965 52ca72241fe8f3338469fe5c6fe6fb3e 490 Gene3D G3DSA:1.10.10.10 21 81 5.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14965 52ca72241fe8f3338469fe5c6fe6fb3e 490 SUPERFAMILY SSF46785 21 82 3.19E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14965 52ca72241fe8f3338469fe5c6fe6fb3e 490 SMART SM00345 27 84 1.2E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS07075 74c82c7cf8735938d594466ffe10f09f 65 SUPERFAMILY SSF54285 1 65 4.22E-15 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JE55_RS07075 74c82c7cf8735938d594466ffe10f09f 65 Gene3D G3DSA:3.10.20.30 1 65 6.2E-21 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS07075 74c82c7cf8735938d594466ffe10f09f 65 Pfam PF02597 ThiS family 7 65 2.9E-13 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 JE55_RS07075 74c82c7cf8735938d594466ffe10f09f 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 65 1.6E-15 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis JE55_RS12560 065ad6be64f6e62c7b36e8de433275f4 185 Gene3D G3DSA:3.30.1060.10 4 161 1.7E-71 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 JE55_RS12560 065ad6be64f6e62c7b36e8de433275f4 185 SUPERFAMILY SSF55068 5 173 4.84E-73 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 JE55_RS12560 065ad6be64f6e62c7b36e8de433275f4 185 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 7 161 5.4E-59 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 JE55_RS12560 065ad6be64f6e62c7b36e8de433275f4 185 PANTHER PTHR10173 4 161 7.8E-82 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 JE55_RS12560 065ad6be64f6e62c7b36e8de433275f4 185 PANTHER PTHR10173:SF34 4 161 7.8E-82 T 22-04-2016 JE55_RS12560 065ad6be64f6e62c7b36e8de433275f4 185 Pfam PF01625 Peptide methionine sulfoxide reductase 9 161 1.4E-63 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 JE55_RS12560 065ad6be64f6e62c7b36e8de433275f4 185 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 6 166 36.508 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 JE55_RS00115 c1b6a49c04567048c7b652d384c390fd 299 SMART SM00244 21 184 2.7E-16 T 22-04-2016 IPR001107 Band 7 domain JE55_RS00115 c1b6a49c04567048c7b652d384c390fd 299 PANTHER PTHR10264 1 287 1.5E-63 T 22-04-2016 IPR001972 Stomatin family GO:0016020 JE55_RS00115 c1b6a49c04567048c7b652d384c390fd 299 PANTHER PTHR10264:SF80 1 287 1.5E-63 T 22-04-2016 JE55_RS00115 c1b6a49c04567048c7b652d384c390fd 299 SUPERFAMILY SSF117892 56 191 9.02E-18 T 22-04-2016 IPR001107 Band 7 domain JE55_RS00115 c1b6a49c04567048c7b652d384c390fd 299 Pfam PF01145 SPFH domain / Band 7 family 24 200 3.7E-29 T 22-04-2016 IPR001107 Band 7 domain JE55_RS00115 c1b6a49c04567048c7b652d384c390fd 299 PIRSF PIRSF005651 1 291 4.9E-66 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 JE55_RS15325 59fa08a66ec7cd2426033b7f82db5804 152 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 69 1.1E-9 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS15325 59fa08a66ec7cd2426033b7f82db5804 152 Gene3D G3DSA:3.40.50.1240 1 150 1.4E-30 T 22-04-2016 IPR029033 Histidine phosphatase superfamily JE55_RS15325 59fa08a66ec7cd2426033b7f82db5804 152 SMART SM00855 2 108 6.0E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 JE55_RS15325 59fa08a66ec7cd2426033b7f82db5804 152 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 145 2.5E-22 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- JE55_RS15325 59fa08a66ec7cd2426033b7f82db5804 152 SUPERFAMILY SSF53254 2 136 6.28E-20 T 22-04-2016 IPR029033 Histidine phosphatase superfamily JE55_RS15505 ac1897816e6dae8847fc286feaed1f70 325 SUPERFAMILY SSF53850 106 311 2.32E-31 T 22-04-2016 JE55_RS15505 ac1897816e6dae8847fc286feaed1f70 325 Gene3D G3DSA:3.40.190.10 202 279 2.6E-4 T 22-04-2016 JE55_RS15505 ac1897816e6dae8847fc286feaed1f70 325 Pfam PF03466 LysR substrate binding domain 105 308 1.4E-27 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS15505 ac1897816e6dae8847fc286feaed1f70 325 SUPERFAMILY SSF46785 13 127 1.08E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS15505 ac1897816e6dae8847fc286feaed1f70 325 PANTHER PTHR30126 18 323 2.4E-53 T 22-04-2016 JE55_RS15505 ac1897816e6dae8847fc286feaed1f70 325 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 78 2.7E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS15505 ac1897816e6dae8847fc286feaed1f70 325 Gene3D G3DSA:3.40.190.10 105 201 2.0E-13 T 22-04-2016 JE55_RS15505 ac1897816e6dae8847fc286feaed1f70 325 Gene3D G3DSA:1.10.10.10 16 96 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 Pfam PF02926 THUMP domain 45 165 2.0E-10 T 22-04-2016 IPR004114 THUMP domain GO:0003723 JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 PANTHER PTHR14911:SF13 361 409 1.5E-48 T 22-04-2016 JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 PANTHER PTHR14911:SF13 267 339 1.5E-48 T 22-04-2016 JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 PANTHER PTHR14911:SF13 3 224 1.5E-48 T 22-04-2016 JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 PANTHER PTHR14911 361 409 1.5E-48 T 22-04-2016 JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 PANTHER PTHR14911 267 339 1.5E-48 T 22-04-2016 JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 PANTHER PTHR14911 3 224 1.5E-48 T 22-04-2016 JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 SMART SM00981 68 166 7.9E-22 T 22-04-2016 IPR004114 THUMP domain GO:0003723 JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 SUPERFAMILY SSF53335 158 229 1.38E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 SUPERFAMILY SSF53335 356 411 1.38E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 SUPERFAMILY SSF53335 270 329 1.38E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 Gene3D G3DSA:3.40.50.150 267 412 7.0E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 Gene3D G3DSA:3.40.50.150 159 226 7.0E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 315 321 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JE55_RS05465 8975781afd46f3afa6e3abb936c1146e 430 Pfam PF01170 Putative RNA methylase family UPF0020 174 327 9.3E-39 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS02365 b0fb08ac28b906274663bc4c992f7fed 514 SUPERFAMILY SSF89796 119 505 3.4E-129 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS02365 b0fb08ac28b906274663bc4c992f7fed 514 PANTHER PTHR24023 169 329 2.6E-24 T 22-04-2016 JE55_RS02365 b0fb08ac28b906274663bc4c992f7fed 514 PANTHER PTHR24023 348 493 2.6E-24 T 22-04-2016 JE55_RS02365 b0fb08ac28b906274663bc4c992f7fed 514 Gene3D G3DSA:3.30.1540.10 338 420 5.9E-31 T 22-04-2016 JE55_RS02365 b0fb08ac28b906274663bc4c992f7fed 514 Gene3D G3DSA:3.40.50.10540 421 508 2.5E-105 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS02365 b0fb08ac28b906274663bc4c992f7fed 514 Gene3D G3DSA:3.40.50.10540 118 332 2.5E-105 T 22-04-2016 IPR023606 CoA-transferase family III domain JE55_RS02365 b0fb08ac28b906274663bc4c992f7fed 514 PANTHER PTHR24023:SF593 169 329 2.6E-24 T 22-04-2016 JE55_RS02365 b0fb08ac28b906274663bc4c992f7fed 514 PANTHER PTHR24023:SF593 348 493 2.6E-24 T 22-04-2016 JE55_RS02365 b0fb08ac28b906274663bc4c992f7fed 514 Pfam PF02515 CoA-transferase family III 121 483 1.9E-121 T 22-04-2016 IPR003673 CoA-transferase family III GO:0003824 JE55_RS09555 6a308731aa7c272c4d7b28d08a5f5b45 113 Pfam PF02049 Flagellar hook-basal body complex protein FliE 30 113 6.8E-27 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JE55_RS09555 6a308731aa7c272c4d7b28d08a5f5b45 113 PANTHER PTHR34653 1 113 4.9E-20 T 22-04-2016 JE55_RS09555 6a308731aa7c272c4d7b28d08a5f5b45 113 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 6 113 18.046 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JE55_RS09555 6a308731aa7c272c4d7b28d08a5f5b45 113 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 33 112 2.4E-21 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JE55_RS09555 6a308731aa7c272c4d7b28d08a5f5b45 113 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 77 93 1.07E-15 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JE55_RS09555 6a308731aa7c272c4d7b28d08a5f5b45 113 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 98 111 1.07E-15 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JE55_RS09555 6a308731aa7c272c4d7b28d08a5f5b45 113 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 42 58 1.07E-15 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 JE55_RS08075 9ccf9e21bb64c6ed69423d1eb11ca514 226 Pfam PF13489 Methyltransferase domain 51 172 8.0E-9 T 22-04-2016 JE55_RS08075 9ccf9e21bb64c6ed69423d1eb11ca514 226 SUPERFAMILY SSF53335 34 172 2.35E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS04125 841d82fa84efc857f9249e0882844667 173 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 10 151 28.119 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04125 841d82fa84efc857f9249e0882844667 173 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 15 146 4.8E-41 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04125 841d82fa84efc857f9249e0882844667 173 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 147 2.2E-49 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04125 841d82fa84efc857f9249e0882844667 173 PANTHER PTHR21058 1 157 1.4E-60 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04125 841d82fa84efc857f9249e0882844667 173 SUPERFAMILY SSF52121 6 151 1.07E-53 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS04125 841d82fa84efc857f9249e0882844667 173 Gene3D G3DSA:3.40.50.960 7 151 1.7E-54 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 JE55_RS08525 0831af45b0904640157ec05b92701821 251 Pfam PF00005 ABC transporter 36 178 5.6E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS08525 0831af45b0904640157ec05b92701821 251 Gene3D G3DSA:3.40.50.300 18 238 4.2E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08525 0831af45b0904640157ec05b92701821 251 PANTHER PTHR24220 22 238 1.0E-85 T 22-04-2016 JE55_RS08525 0831af45b0904640157ec05b92701821 251 PANTHER PTHR24220:SF469 22 238 1.0E-85 T 22-04-2016 JE55_RS08525 0831af45b0904640157ec05b92701821 251 SMART SM00382 45 230 2.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS08525 0831af45b0904640157ec05b92701821 251 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS08525 0831af45b0904640157ec05b92701821 251 SUPERFAMILY SSF52540 19 242 7.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12595 1034dd54848973144fbb1ed2997c4cc4 293 PANTHER PTHR13903 13 290 4.0E-114 T 22-04-2016 IPR012093 Pirin JE55_RS12595 1034dd54848973144fbb1ed2997c4cc4 293 Gene3D G3DSA:2.60.120.10 6 246 1.2E-67 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS12595 1034dd54848973144fbb1ed2997c4cc4 293 SUPERFAMILY SSF51182 8 287 1.54E-78 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS12595 1034dd54848973144fbb1ed2997c4cc4 293 Pfam PF02678 Pirin 21 124 1.9E-34 T 22-04-2016 IPR003829 Pirin, N-terminal domain JE55_RS12595 1034dd54848973144fbb1ed2997c4cc4 293 PANTHER PTHR13903:SF4 13 290 4.0E-114 T 22-04-2016 JE55_RS12595 1034dd54848973144fbb1ed2997c4cc4 293 PIRSF PIRSF006232 1 283 7.1E-85 T 22-04-2016 IPR012093 Pirin JE55_RS12595 1034dd54848973144fbb1ed2997c4cc4 293 Pfam PF05726 Pirin C-terminal cupin domain 179 275 3.5E-17 T 22-04-2016 IPR008778 Pirin, C-terminal domain JE55_RS17980 470e2c4592dfab502e9fc94493ae277d 96 PANTHER PTHR33606 1 90 3.0E-27 T 22-04-2016 JE55_RS17980 470e2c4592dfab502e9fc94493ae277d 96 Pfam PF03795 YCII-related domain 1 86 8.7E-12 T 22-04-2016 IPR005545 YCII-related JE55_RS17980 470e2c4592dfab502e9fc94493ae277d 96 Gene3D G3DSA:3.30.70.1060 1 88 3.6E-22 T 22-04-2016 JE55_RS17980 470e2c4592dfab502e9fc94493ae277d 96 SUPERFAMILY SSF54909 1 88 8.58E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS17980 470e2c4592dfab502e9fc94493ae277d 96 PANTHER PTHR33606:SF3 1 90 3.0E-27 T 22-04-2016 JE55_RS11990 d3b39d796417d915043d2622ccdf3e5c 451 SUPERFAMILY SSF51690 139 443 3.68E-98 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 JE55_RS11990 d3b39d796417d915043d2622ccdf3e5c 451 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 155 335 1.7E-10 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 JE55_RS11990 d3b39d796417d915043d2622ccdf3e5c 451 PIRSF PIRSF000484 2 449 4.2E-121 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 JE55_RS11990 d3b39d796417d915043d2622ccdf3e5c 451 SUPERFAMILY SSF54675 6 137 1.94E-41 T 22-04-2016 JE55_RS11990 d3b39d796417d915043d2622ccdf3e5c 451 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 10 434 8.4E-148 T 22-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 JE55_RS11990 d3b39d796417d915043d2622ccdf3e5c 451 Gene3D G3DSA:3.20.140.10 4 378 7.2E-102 T 22-04-2016 JE55_RS11990 d3b39d796417d915043d2622ccdf3e5c 451 PANTHER PTHR11098 9 450 1.8E-135 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 JE55_RS11990 d3b39d796417d915043d2622ccdf3e5c 451 PANTHER PTHR11098:SF1 9 450 1.8E-135 T 22-04-2016 JE55_RS10150 d642b902791538302b7a49a251832209 152 PANTHER PTHR30154 1 152 1.1E-62 T 22-04-2016 JE55_RS10150 d642b902791538302b7a49a251832209 152 Pfam PF01037 Lrp/AsnC ligand binding domain 71 141 2.9E-20 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS10150 d642b902791538302b7a49a251832209 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.2E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS10150 d642b902791538302b7a49a251832209 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.2E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS10150 d642b902791538302b7a49a251832209 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.2E-18 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 JE55_RS10150 d642b902791538302b7a49a251832209 152 SUPERFAMILY SSF54909 64 151 2.41E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS10150 d642b902791538302b7a49a251832209 152 Gene3D G3DSA:3.30.70.920 56 139 4.2E-30 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JE55_RS10150 d642b902791538302b7a49a251832209 152 SUPERFAMILY SSF46785 2 62 3.64E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10150 d642b902791538302b7a49a251832209 152 SMART SM00344 3 112 5.0E-47 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 JE55_RS10150 d642b902791538302b7a49a251832209 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 4.5E-19 T 22-04-2016 JE55_RS10150 d642b902791538302b7a49a251832209 152 PANTHER PTHR30154:SF28 1 152 1.1E-62 T 22-04-2016 JE55_RS10150 d642b902791538302b7a49a251832209 152 Gene3D G3DSA:1.10.10.10 4 55 1.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05995 2713114d02fbe4caf3fab2a1e3d25ccf 186 PANTHER PTHR10681:SF125 57 174 3.0E-23 T 22-04-2016 JE55_RS05995 2713114d02fbe4caf3fab2a1e3d25ccf 186 SUPERFAMILY SSF52833 13 185 5.23E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS05995 2713114d02fbe4caf3fab2a1e3d25ccf 186 Pfam PF08534 Redoxin 55 177 2.3E-30 T 22-04-2016 IPR013740 Redoxin GO:0016491 JE55_RS05995 2713114d02fbe4caf3fab2a1e3d25ccf 186 PANTHER PTHR10681 57 174 3.0E-23 T 22-04-2016 JE55_RS05995 2713114d02fbe4caf3fab2a1e3d25ccf 186 ProSitePatterns PS00194 Thioredoxin family active site. 77 95 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 JE55_RS05995 2713114d02fbe4caf3fab2a1e3d25ccf 186 Gene3D G3DSA:3.40.30.10 10 186 5.8E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS02195 59ced59887fdbfe534a1d4521ef876f0 240 PANTHER PTHR30296 2 237 3.4E-88 T 22-04-2016 JE55_RS02195 59ced59887fdbfe534a1d4521ef876f0 240 PANTHER PTHR30296:SF0 2 237 3.4E-88 T 22-04-2016 JE55_RS02195 59ced59887fdbfe534a1d4521ef876f0 240 Pfam PF02754 Cysteine-rich domain 132 215 3.1E-10 T 22-04-2016 IPR004017 Cysteine-rich domain JE55_RS02195 59ced59887fdbfe534a1d4521ef876f0 240 Pfam PF02754 Cysteine-rich domain 3 84 2.5E-14 T 22-04-2016 IPR004017 Cysteine-rich domain JE55_RS04350 46eccfdec84582fbcc5ab69bde82dde8 340 PANTHER PTHR10366:SF39 6 339 1.3E-149 T 22-04-2016 JE55_RS04350 46eccfdec84582fbcc5ab69bde82dde8 340 Gene3D G3DSA:3.90.25.10 267 339 3.0E-53 T 22-04-2016 JE55_RS04350 46eccfdec84582fbcc5ab69bde82dde8 340 Gene3D G3DSA:3.90.25.10 184 235 3.0E-53 T 22-04-2016 JE55_RS04350 46eccfdec84582fbcc5ab69bde82dde8 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 327 1.4E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04350 46eccfdec84582fbcc5ab69bde82dde8 340 Gene3D G3DSA:3.40.50.720 3 183 5.7E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04350 46eccfdec84582fbcc5ab69bde82dde8 340 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 7 337 1.7E-135 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 JE55_RS04350 46eccfdec84582fbcc5ab69bde82dde8 340 SUPERFAMILY SSF51735 1 337 3.56E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04350 46eccfdec84582fbcc5ab69bde82dde8 340 PANTHER PTHR10366 6 339 1.3E-149 T 22-04-2016 JE55_RS07920 4fe8ed79e9c93e53073a487eeadc4a20 242 PIRSF PIRSF002884 8 242 1.9E-75 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- JE55_RS07920 4fe8ed79e9c93e53073a487eeadc4a20 242 Gene3D G3DSA:1.10.287.500 47 179 4.5E-52 T 22-04-2016 JE55_RS07920 4fe8ed79e9c93e53073a487eeadc4a20 242 Gene3D G3DSA:1.20.5.590 25 46 1.9E-8 T 22-04-2016 JE55_RS07920 4fe8ed79e9c93e53073a487eeadc4a20 242 Pfam PF04344 Chemotaxis phosphatase, CheZ 28 242 6.2E-75 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- JE55_RS07920 4fe8ed79e9c93e53073a487eeadc4a20 242 PANTHER PTHR22617:SF32 5 242 6.6E-64 T 22-04-2016 JE55_RS07920 4fe8ed79e9c93e53073a487eeadc4a20 242 SUPERFAMILY SSF75708 20 241 3.92E-61 T 22-04-2016 JE55_RS07920 4fe8ed79e9c93e53073a487eeadc4a20 242 PANTHER PTHR22617 5 242 6.6E-64 T 22-04-2016 JE55_RS14040 80cba746cbf68cfc8d70e3400eac1d3f 506 PANTHER PTHR41287 9 506 3.0E-49 T 22-04-2016 JE55_RS14040 80cba746cbf68cfc8d70e3400eac1d3f 506 Pfam PF03354 Phage Terminase 43 490 9.2E-41 T 22-04-2016 IPR005021 Phage terminase JE55_RS13745 70b1dc1efd154c3380904390e01c055d 484 PANTHER PTHR11751 99 483 1.1E-95 T 22-04-2016 JE55_RS13745 70b1dc1efd154c3380904390e01c055d 484 SMART SM00345 24 83 1.2E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS13745 70b1dc1efd154c3380904390e01c055d 484 Gene3D G3DSA:1.10.10.10 18 85 2.0E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13745 70b1dc1efd154c3380904390e01c055d 484 SUPERFAMILY SSF53383 130 474 3.67E-80 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS13745 70b1dc1efd154c3380904390e01c055d 484 SUPERFAMILY SSF46785 17 87 1.11E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13745 70b1dc1efd154c3380904390e01c055d 484 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 83 3.8E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 JE55_RS13745 70b1dc1efd154c3380904390e01c055d 484 Pfam PF00155 Aminotransferase class I and II 150 465 5.9E-34 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS13745 70b1dc1efd154c3380904390e01c055d 484 Gene3D G3DSA:3.40.640.10 152 375 3.6E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS13745 70b1dc1efd154c3380904390e01c055d 484 PANTHER PTHR11751:SF386 99 483 1.1E-95 T 22-04-2016 JE55_RS06635 a868a3f211a486aed8e7137f7656e8a5 67 PRINTS PR00050 Cold shock protein signature 40 58 4.2E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS06635 a868a3f211a486aed8e7137f7656e8a5 67 PRINTS PR00050 Cold shock protein signature 25 34 4.2E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS06635 a868a3f211a486aed8e7137f7656e8a5 67 PRINTS PR00050 Cold shock protein signature 4 19 4.2E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS06635 a868a3f211a486aed8e7137f7656e8a5 67 Gene3D G3DSA:2.40.50.140 1 65 4.0E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS06635 a868a3f211a486aed8e7137f7656e8a5 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site JE55_RS06635 a868a3f211a486aed8e7137f7656e8a5 67 PANTHER PTHR11544 1 67 1.4E-35 T 22-04-2016 JE55_RS06635 a868a3f211a486aed8e7137f7656e8a5 67 SMART SM00357 3 67 8.0E-29 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 JE55_RS06635 a868a3f211a486aed8e7137f7656e8a5 67 SUPERFAMILY SSF50249 1 66 2.36E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS06635 a868a3f211a486aed8e7137f7656e8a5 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 5.2E-30 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 JE55_RS06635 a868a3f211a486aed8e7137f7656e8a5 67 PIRSF PIRSF002599 1 67 4.0E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 JE55_RS00970 63ea785fbe3384c08c9a025f41c5587e 400 Gene3D G3DSA:1.10.760.10 327 394 1.5E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS00970 63ea785fbe3384c08c9a025f41c5587e 400 SUPERFAMILY SSF46626 321 397 4.8E-7 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS00970 63ea785fbe3384c08c9a025f41c5587e 400 Pfam PF06181 Protein of unknown function (DUF989) 4 297 2.3E-137 T 22-04-2016 IPR010389 Domain of unknown function DUF989 JE55_RS06075 badd367bf33a480790837a226f18142b 183 Pfam PF00156 Phosphoribosyl transferase domain 13 165 6.1E-18 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 JE55_RS06075 badd367bf33a480790837a226f18142b 183 Gene3D G3DSA:3.40.50.2020 12 181 2.4E-48 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS06075 badd367bf33a480790837a226f18142b 183 SUPERFAMILY SSF53271 13 181 4.98E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS06075 badd367bf33a480790837a226f18142b 183 PANTHER PTHR22573:SF56 14 183 2.6E-36 T 22-04-2016 JE55_RS06075 badd367bf33a480790837a226f18142b 183 PANTHER PTHR22573 14 183 2.6E-36 T 22-04-2016 JE55_RS05350 aa0ccb4f7c75154f273525b6e3a69bb2 287 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site JE55_RS05350 aa0ccb4f7c75154f273525b6e3a69bb2 287 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 7 282 2.4E-96 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 JE55_RS05350 aa0ccb4f7c75154f273525b6e3a69bb2 287 Pfam PF01040 UbiA prenyltransferase family 23 268 8.4E-60 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 JE55_RS05350 aa0ccb4f7c75154f273525b6e3a69bb2 287 PANTHER PTHR11048 7 287 2.8E-74 T 22-04-2016 JE55_RS05350 aa0ccb4f7c75154f273525b6e3a69bb2 287 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 283 27.624 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 JE55_RS17350 36ed1a724b75dd44746f53ed5db2780b 312 SUPERFAMILY SSF103481 193 293 8.24E-14 T 22-04-2016 JE55_RS17350 36ed1a724b75dd44746f53ed5db2780b 312 Pfam PF00892 EamA-like transporter family 6 140 1.2E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS17350 36ed1a724b75dd44746f53ed5db2780b 312 Pfam PF00892 EamA-like transporter family 154 288 2.8E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS17350 36ed1a724b75dd44746f53ed5db2780b 312 PANTHER PTHR12715:SF11 1 294 6.8E-48 T 22-04-2016 JE55_RS17350 36ed1a724b75dd44746f53ed5db2780b 312 PANTHER PTHR12715 1 294 6.8E-48 T 22-04-2016 JE55_RS17350 36ed1a724b75dd44746f53ed5db2780b 312 SUPERFAMILY SSF103481 40 144 4.32E-14 T 22-04-2016 JE55_RS08045 30b7668a1167e8be8d6764fbd3724753 344 Gene3D G3DSA:3.40.47.10 10 168 2.4E-51 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08045 30b7668a1167e8be8d6764fbd3724753 344 SUPERFAMILY SSF53901 5 342 4.92E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08045 30b7668a1167e8be8d6764fbd3724753 344 Gene3D G3DSA:3.40.47.10 169 179 1.8E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08045 30b7668a1167e8be8d6764fbd3724753 344 Gene3D G3DSA:3.40.47.10 217 343 1.8E-41 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 JE55_RS08045 30b7668a1167e8be8d6764fbd3724753 344 PANTHER PTHR34069 6 342 9.3E-82 T 22-04-2016 JE55_RS08045 30b7668a1167e8be8d6764fbd3724753 344 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 258 343 1.7E-27 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 JE55_RS08045 30b7668a1167e8be8d6764fbd3724753 344 PANTHER PTHR34069:SF2 6 342 9.3E-82 T 22-04-2016 JE55_RS08045 30b7668a1167e8be8d6764fbd3724753 344 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 115 194 3.0E-20 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 PANTHER PTHR30534:SF0 2 331 7.9E-108 T 22-04-2016 JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 246 266 1.7E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 32 58 1.7E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 224 244 1.7E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 270 296 1.7E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 3 19 1.7E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 193 218 1.7E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 112 135 1.7E-65 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 Pfam PF14841 FliG middle domain 115 185 1.7E-24 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 SUPERFAMILY SSF48029 3 118 1.28E-23 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 Pfam PF01706 FliG C-terminal domain 216 322 3.7E-40 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 PANTHER PTHR30534 2 331 7.9E-108 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 Gene3D G3DSA:1.10.220.30 2 70 5.3E-17 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 Gene3D G3DSA:1.10.220.30 193 330 2.2E-41 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 Gene3D G3DSA:1.10.220.30 72 182 4.8E-30 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 5 331 5.6E-112 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 SUPERFAMILY SSF48029 114 323 3.79E-65 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 Pfam PF14842 FliG N-terminal domain 4 103 3.3E-31 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JE55_RS09545 46bb144ff1ea9511b05bcbcd8a1b3d1d 331 PIRSF PIRSF003161 1 331 3.1E-114 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 JE55_RS09330 da60506d8eacc2b720e31a44c80d16d4 279 SUPERFAMILY SSF52540 70 248 2.78E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09330 da60506d8eacc2b720e31a44c80d16d4 279 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 40 263 2.0E-72 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related JE55_RS09330 da60506d8eacc2b720e31a44c80d16d4 279 PANTHER PTHR34383 40 270 1.5E-98 T 22-04-2016 JE55_RS09330 da60506d8eacc2b720e31a44c80d16d4 279 Gene3D G3DSA:3.40.50.300 16 273 2.0E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09330 da60506d8eacc2b720e31a44c80d16d4 279 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 18 274 6.0E-105 T 22-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 JE55_RS09330 da60506d8eacc2b720e31a44c80d16d4 279 PIRSF PIRSF028756 9 276 4.2E-76 T 22-04-2016 IPR016898 Polyphosphate kinase 2 JE55_RS01400 2f8632e8832bc8453245e186e52e4e23 155 Gene3D G3DSA:3.40.630.30 11 139 9.5E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS01400 2f8632e8832bc8453245e186e52e4e23 155 SUPERFAMILY SSF55729 12 138 1.45E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS01400 2f8632e8832bc8453245e186e52e4e23 155 Pfam PF00583 Acetyltransferase (GNAT) family 68 135 7.9E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS00580 55f9064cfac63ba3f53b232e89db0b4d 319 SUPERFAMILY SSF53474 29 316 1.37E-69 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS00580 55f9064cfac63ba3f53b232e89db0b4d 319 Pfam PF07859 alpha/beta hydrolase fold 83 292 2.8E-74 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 JE55_RS00580 55f9064cfac63ba3f53b232e89db0b4d 319 Gene3D G3DSA:3.40.50.1820 2 316 9.7E-95 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS00580 55f9064cfac63ba3f53b232e89db0b4d 319 PANTHER PTHR23024:SF24 51 313 2.0E-80 T 22-04-2016 JE55_RS00580 55f9064cfac63ba3f53b232e89db0b4d 319 PANTHER PTHR23024 51 313 2.0E-80 T 22-04-2016 JE55_RS02645 4b992f7318b92a1789c2b7b62bbcbee7 110 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 13 108 7.2E-36 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 JE55_RS02645 4b992f7318b92a1789c2b7b62bbcbee7 110 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 21 93 3.3E-17 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 JE55_RS02645 4b992f7318b92a1789c2b7b62bbcbee7 110 PANTHER PTHR36835 1 110 2.1E-30 T 22-04-2016 JE55_RS13155 f867dc2b182b7705feef75b45a986920 153 PANTHER PTHR14087 1 147 4.0E-77 T 22-04-2016 JE55_RS13155 f867dc2b182b7705feef75b45a986920 153 SUPERFAMILY SSF88697 1 150 2.15E-59 T 22-04-2016 IPR015947 PUA-like domain JE55_RS13155 f867dc2b182b7705feef75b45a986920 153 Pfam PF01878 EVE domain 2 149 3.9E-53 T 22-04-2016 IPR002740 EVE domain JE55_RS13155 f867dc2b182b7705feef75b45a986920 153 Gene3D G3DSA:3.10.590.10 1 151 1.1E-30 T 22-04-2016 IPR002740 EVE domain JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 PANTHER PTHR30033 459 667 5.8E-103 T 22-04-2016 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 PANTHER PTHR30033 1 425 5.8E-103 T 22-04-2016 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 609 665 1.6E-10 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 2.6E-24 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 2.6E-24 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 PRINTS PR01005 Flagellar hook-associated protein signature 413 430 2.6E-24 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 PRINTS PR01005 Flagellar hook-associated protein signature 124 144 2.6E-24 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 PRINTS PR01005 Flagellar hook-associated protein signature 157 181 2.6E-24 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 PRINTS PR01005 Flagellar hook-associated protein signature 363 385 2.6E-24 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 PRINTS PR01005 Flagellar hook-associated protein signature 214 232 2.6E-24 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 SUPERFAMILY SSF64518 469 666 8.37E-25 T 22-04-2016 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 PANTHER PTHR30033:SF1 459 667 5.8E-103 T 22-04-2016 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 PANTHER PTHR30033:SF1 1 425 5.8E-103 T 22-04-2016 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 372 3.7E-71 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 JE55_RS09810 a8a49c3461198b582dc0af79c1402520 667 SUPERFAMILY SSF64518 132 464 5.36E-32 T 22-04-2016 JE55_RS10335 fbf4949ee92690fe2d0b0e179704fbec 603 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 16 577 1.1E-254 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 JE55_RS10335 fbf4949ee92690fe2d0b0e179704fbec 603 PIRSF PIRSF000719 7 587 6.7E-258 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 JE55_RS10335 fbf4949ee92690fe2d0b0e179704fbec 603 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 8 582 44.713 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 JE55_RS10335 fbf4949ee92690fe2d0b0e179704fbec 603 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 16 585 0.0 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 JE55_RS10335 fbf4949ee92690fe2d0b0e179704fbec 603 PANTHER PTHR39559 7 588 3.7E-153 T 22-04-2016 JE55_RS11835 7702aaac4cc6e0b813d519150cb27f87 65 Pfam PF09550 Phage tail assembly chaperone protein, TAC 2 34 5.5E-5 T 22-04-2016 IPR019056 Phage tail assembly chaperone protein, TAC6 JE55_RS07055 a85bda4e68409519504eeabdc1d53ad0 255 Pfam PF02405 Permease MlaE 41 252 5.9E-74 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 JE55_RS07055 a85bda4e68409519504eeabdc1d53ad0 255 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 22 254 7.9E-81 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria JE55_RS07055 a85bda4e68409519504eeabdc1d53ad0 255 PANTHER PTHR30188 1 254 2.3E-102 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 JE55_RS07055 a85bda4e68409519504eeabdc1d53ad0 255 PANTHER PTHR30188:SF4 1 254 2.3E-102 T 22-04-2016 JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.9E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 Gene3D G3DSA:3.40.190.10 179 258 1.4E-16 T 22-04-2016 JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 PANTHER PTHR30537:SF26 1 309 9.2E-111 T 22-04-2016 JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 PANTHER PTHR30537 1 309 9.2E-111 T 22-04-2016 JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 Gene3D G3DSA:3.40.190.10 96 178 6.6E-33 T 22-04-2016 JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 SUPERFAMILY SSF46785 7 88 3.75E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 SUPERFAMILY SSF53850 95 295 5.07E-43 T 22-04-2016 JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 5.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 5.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 5.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 Gene3D G3DSA:1.10.10.10 5 89 2.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10520 70b446272d547b945f2ea1b649e68c3e 321 Pfam PF03466 LysR substrate binding domain 92 291 7.6E-39 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS02010 c645de2cad12e576abb1b66a04e4fc5d 380 Pfam PF06804 NlpB/DapX lipoprotein 40 377 2.8E-39 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein JE55_RS03990 c15c571a17ace358b013dce516f81af1 88 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 3 74 1.9E-27 T 22-04-2016 IPR018680 Protein of unknown function DUF2164 JE55_RS14685 6524366b79c3bb627be4d30fdb4aadf8 182 Pfam PF00578 AhpC/TSA family 27 154 5.8E-27 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS14685 6524366b79c3bb627be4d30fdb4aadf8 182 SUPERFAMILY SSF52833 23 175 2.89E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS14685 6524366b79c3bb627be4d30fdb4aadf8 182 Gene3D G3DSA:3.40.30.10 24 175 1.0E-37 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS14685 6524366b79c3bb627be4d30fdb4aadf8 182 PIRSF PIRSF000239 20 181 6.9E-22 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 JE55_RS14685 6524366b79c3bb627be4d30fdb4aadf8 182 PANTHER PTHR10681 24 174 5.7E-31 T 22-04-2016 JE55_RS08165 6dfde4e058f27895bb5474fa95c9e6f5 180 Pfam PF05488 PAAR motif 9 79 1.3E-19 T 22-04-2016 IPR008727 PAAR motif JE55_RS08165 6dfde4e058f27895bb5474fa95c9e6f5 180 PANTHER PTHR37465 5 88 8.0E-13 T 22-04-2016 JE55_RS11865 ab3e10841cb0c8f50ef974841c301294 432 SUPERFAMILY SSF46626 41 167 2.63E-23 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11865 ab3e10841cb0c8f50ef974841c301294 432 PIRSF PIRSF000018 16 432 1.1E-150 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 JE55_RS11865 ab3e10841cb0c8f50ef974841c301294 432 SUPERFAMILY SSF46626 324 429 7.84E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11865 ab3e10841cb0c8f50ef974841c301294 432 PANTHER PTHR35008:SF5 35 428 6.6E-177 T 22-04-2016 JE55_RS11865 ab3e10841cb0c8f50ef974841c301294 432 Gene3D G3DSA:1.10.760.10 325 428 3.6E-26 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11865 ab3e10841cb0c8f50ef974841c301294 432 PANTHER PTHR35008 35 428 6.6E-177 T 22-04-2016 JE55_RS11865 ab3e10841cb0c8f50ef974841c301294 432 Pfam PF00034 Cytochrome c 324 408 2.9E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11865 ab3e10841cb0c8f50ef974841c301294 432 Pfam PF00034 Cytochrome c 49 148 8.9E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11865 ab3e10841cb0c8f50ef974841c301294 432 SUPERFAMILY SSF46626 194 309 9.0E-17 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11865 ab3e10841cb0c8f50ef974841c301294 432 Gene3D G3DSA:1.10.760.10 45 148 7.8E-18 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS11865 ab3e10841cb0c8f50ef974841c301294 432 Gene3D G3DSA:1.10.760.10 192 300 3.1E-8 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS16270 8b033eccdbd2bf725c13a04f5538f5b8 240 PANTHER PTHR30336:SF1 9 227 4.8E-29 T 22-04-2016 JE55_RS16270 8b033eccdbd2bf725c13a04f5538f5b8 240 Gene3D G3DSA:3.40.50.620 66 197 3.6E-24 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS16270 8b033eccdbd2bf725c13a04f5538f5b8 240 PANTHER PTHR30336 9 227 4.8E-29 T 22-04-2016 JE55_RS16270 8b033eccdbd2bf725c13a04f5538f5b8 240 Pfam PF02698 DUF218 domain 67 227 4.1E-27 T 22-04-2016 IPR003848 Domain of unknown function DUF218 JE55_RS10820 01add3cc45f1f59525658ed1397bdcf0 323 PANTHER PTHR35271 1 323 1.8E-69 T 22-04-2016 JE55_RS10820 01add3cc45f1f59525658ed1397bdcf0 323 Gene3D G3DSA:3.40.50.2300 31 156 8.3E-54 T 22-04-2016 JE55_RS10820 01add3cc45f1f59525658ed1397bdcf0 323 Pfam PF04392 ABC transporter substrate binding protein 32 321 1.5E-101 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein JE55_RS10820 01add3cc45f1f59525658ed1397bdcf0 323 SUPERFAMILY SSF53822 38 286 1.91E-18 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS10820 01add3cc45f1f59525658ed1397bdcf0 323 Gene3D G3DSA:3.40.50.2300 157 287 6.7E-52 T 22-04-2016 JE55_RS09130 c24766ac42295c7169090c8e3e7b2be4 189 Pfam PF07813 LTXXQ motif family protein 82 177 4.7E-10 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 JE55_RS16850 63cb68f83303f70919578a81281cd5d0 63 Pfam PF04964 Flp/Fap pilin component 9 54 3.0E-7 T 22-04-2016 IPR007047 Flp/Fap pilin component JE55_RS04265 fb107ec2c6a0243ba4a6c029020e1ac5 400 PANTHER PTHR30482 29 127 8.9E-159 T 22-04-2016 JE55_RS04265 fb107ec2c6a0243ba4a6c029020e1ac5 400 PANTHER PTHR30482 154 392 8.9E-159 T 22-04-2016 JE55_RS04265 fb107ec2c6a0243ba4a6c029020e1ac5 400 Pfam PF02653 Branched-chain amino acid transport system / permease component 84 378 8.5E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS04265 fb107ec2c6a0243ba4a6c029020e1ac5 400 PANTHER PTHR30482:SF4 29 127 8.9E-159 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC JE55_RS04265 fb107ec2c6a0243ba4a6c029020e1ac5 400 PANTHER PTHR30482:SF4 154 392 8.9E-159 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC JE55_RS04265 fb107ec2c6a0243ba4a6c029020e1ac5 400 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 76 389 1.6E-128 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC JE55_RS07935 e8b62225fbf2057029c63c028ffe9b9a 234 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 15 171 29.29 T 22-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 JE55_RS07935 e8b62225fbf2057029c63c028ffe9b9a 234 PANTHER PTHR35147 11 204 3.2E-73 T 22-04-2016 JE55_RS07935 e8b62225fbf2057029c63c028ffe9b9a 234 PANTHER PTHR35147:SF2 11 204 3.2E-73 T 22-04-2016 JE55_RS07935 e8b62225fbf2057029c63c028ffe9b9a 234 Pfam PF03975 CheD chemotactic sensory transduction 63 167 1.1E-33 T 22-04-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 JE55_RS07935 e8b62225fbf2057029c63c028ffe9b9a 234 SUPERFAMILY SSF64438 21 170 3.11E-48 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic JE55_RS11025 758e2f1b6ec5e0bde04e8c8f336275d1 189 Gene3D G3DSA:2.40.160.20 34 189 1.6E-53 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS11025 758e2f1b6ec5e0bde04e8c8f336275d1 189 PIRSF PIRSF029681 3 189 8.9E-55 T 22-04-2016 IPR018550 Lipid A 3-O-deacylase-related JE55_RS11025 758e2f1b6ec5e0bde04e8c8f336275d1 189 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 55 188 9.7E-28 T 22-04-2016 IPR018550 Lipid A 3-O-deacylase-related JE55_RS11025 758e2f1b6ec5e0bde04e8c8f336275d1 189 SUPERFAMILY SSF56925 32 189 2.38E-16 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS04150 9cb060279143d020140991194c12c87a 224 PANTHER PTHR30086 4 219 2.0E-22 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS04150 9cb060279143d020140991194c12c87a 224 Pfam PF01810 LysE type translocator 17 212 2.7E-30 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS13940 49c82690cc51f61d65903c1d5de7b078 254 SUPERFAMILY SSF53448 3 177 7.67E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS13940 49c82690cc51f61d65903c1d5de7b078 254 Gene3D G3DSA:3.90.550.10 7 113 3.3E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS13940 49c82690cc51f61d65903c1d5de7b078 254 Pfam PF00535 Glycosyl transferase family 2 9 126 1.9E-14 T 22-04-2016 IPR001173 Glycosyltransferase 2-like JE55_RS13940 49c82690cc51f61d65903c1d5de7b078 254 PANTHER PTHR10859 2 130 4.5E-22 T 22-04-2016 JE55_RS05155 1deb4e686140e0fff7f8ae7192a80301 227 PANTHER PTHR10513 19 213 4.4E-40 T 22-04-2016 JE55_RS05155 1deb4e686140e0fff7f8ae7192a80301 227 PANTHER PTHR10513:SF16 19 213 4.4E-40 T 22-04-2016 JE55_RS05155 1deb4e686140e0fff7f8ae7192a80301 227 Pfam PF01712 Deoxynucleoside kinase 20 209 1.9E-35 T 22-04-2016 IPR031314 Deoxynucleoside kinase domain JE55_RS05155 1deb4e686140e0fff7f8ae7192a80301 227 SUPERFAMILY SSF52540 18 216 3.32E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05155 1deb4e686140e0fff7f8ae7192a80301 227 PIRSF PIRSF000705 3 219 9.6E-60 T 22-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 JE55_RS05155 1deb4e686140e0fff7f8ae7192a80301 227 Gene3D G3DSA:3.40.50.300 18 212 5.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09670 b636f7542442e68eca280911d7f45006 338 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS09670 b636f7542442e68eca280911d7f45006 338 SUPERFAMILY SSF52540 21 265 1.33E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09670 b636f7542442e68eca280911d7f45006 338 SMART SM00382 51 251 6.0E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS09670 b636f7542442e68eca280911d7f45006 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 246 310 5.5E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JE55_RS09670 b636f7542442e68eca280911d7f45006 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 244 328 1.2E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 JE55_RS09670 b636f7542442e68eca280911d7f45006 338 Gene3D G3DSA:3.40.50.300 17 267 2.4E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS09670 b636f7542442e68eca280911d7f45006 338 PANTHER PTHR24220:SF493 19 333 8.4E-169 T 22-04-2016 JE55_RS09670 b636f7542442e68eca280911d7f45006 338 PANTHER PTHR24220 19 333 8.4E-169 T 22-04-2016 JE55_RS09670 b636f7542442e68eca280911d7f45006 338 Pfam PF00005 ABC transporter 42 193 4.0E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 Gene3D G3DSA:3.40.50.720 2 249 1.6E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 1.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 SUPERFAMILY SSF51735 6 245 3.16E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PANTHER PTHR24322 10 142 5.2E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PANTHER PTHR24322 158 194 5.2E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PANTHER PTHR24322:SF356 10 142 5.2E-56 T 22-04-2016 JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 PANTHER PTHR24322:SF356 158 194 5.2E-56 T 22-04-2016 JE55_RS12680 8b06ec0ed31bf5ee4c25951315407136 252 Pfam PF00106 short chain dehydrogenase 7 196 6.2E-43 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 PANTHER PTHR23293:SF6 197 230 2.2E-66 T 22-04-2016 JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 PANTHER PTHR23293:SF6 20 177 2.2E-66 T 22-04-2016 JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 PANTHER PTHR23293:SF6 263 321 2.2E-66 T 22-04-2016 JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 PIRSF PIRSF002936 15 321 1.0E-137 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 45 274 1.3E-42 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 PANTHER PTHR23293 197 230 2.2E-66 T 22-04-2016 JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 PANTHER PTHR23293 20 177 2.2E-66 T 22-04-2016 JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 PANTHER PTHR23293 263 321 2.2E-66 T 22-04-2016 JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 24 321 4.1E-120 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 SUPERFAMILY SSF52402 21 228 2.03E-61 T 22-04-2016 JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 Gene3D G3DSA:3.40.50.620 262 270 2.9E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01535 7813fa8c25755b9d8507b2a6473893d7 321 Gene3D G3DSA:3.40.50.620 21 229 2.9E-49 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS15880 ed5f5c57bfe6b45594f270522dba947f 149 PANTHER PTHR31793:SF7 11 146 2.0E-60 T 22-04-2016 JE55_RS15880 ed5f5c57bfe6b45594f270522dba947f 149 PANTHER PTHR31793 11 146 2.0E-60 T 22-04-2016 JE55_RS15880 ed5f5c57bfe6b45594f270522dba947f 149 Pfam PF03061 Thioesterase superfamily 30 108 6.9E-13 T 22-04-2016 IPR006683 Thioesterase domain JE55_RS15880 ed5f5c57bfe6b45594f270522dba947f 149 SUPERFAMILY SSF54637 10 144 3.52E-39 T 22-04-2016 IPR029069 HotDog domain JE55_RS15880 ed5f5c57bfe6b45594f270522dba947f 149 Gene3D G3DSA:3.10.129.10 10 146 3.6E-53 T 22-04-2016 IPR029069 HotDog domain JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 483 502 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 SUPERFAMILY SSF52467 208 406 2.0E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 34 223 6.6E-42 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 32 642 4.5E-274 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 PANTHER PTHR18968 13 645 6.0E-203 T 22-04-2016 JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 Gene3D G3DSA:3.40.50.970 27 233 6.9E-54 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 SUPERFAMILY SSF52518 27 232 1.77E-31 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 Gene3D G3DSA:3.40.50.970 438 640 4.4E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 Gene3D G3DSA:3.40.50.1220 239 437 1.8E-44 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 PANTHER PTHR18968:SF9 13 645 6.0E-203 T 22-04-2016 IPR030817 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22|UniPathway: UPA00076 JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 447 600 1.9E-36 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 SUPERFAMILY SSF52518 425 636 2.24E-51 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS15910 19c95df376123f232fd5a09e544e5d16 661 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 247 379 2.6E-31 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 JE55_RS11885 cef486556eb010af862d8eec8908fdfc 115 Gene3D G3DSA:3.90.1590.10 3 102 4.6E-23 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 JE55_RS11885 cef486556eb010af862d8eec8908fdfc 115 SUPERFAMILY SSF51316 1 114 4.5E-33 T 22-04-2016 IPR011057 Mss4-like JE55_RS11885 cef486556eb010af862d8eec8908fdfc 115 PANTHER PTHR28620 1 113 1.9E-34 T 22-04-2016 JE55_RS11885 cef486556eb010af862d8eec8908fdfc 115 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 101 7.7E-7 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 JE55_RS06345 d91e0b0d7d4229ff6aaa9634b4192e9b 142 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 142 50.971 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JE55_RS06345 d91e0b0d7d4229ff6aaa9634b4192e9b 142 PANTHER PTHR34701 2 120 4.4E-43 T 22-04-2016 JE55_RS06345 d91e0b0d7d4229ff6aaa9634b4192e9b 142 SUPERFAMILY SSF89447 2 129 3.35E-39 T 22-04-2016 JE55_RS06345 d91e0b0d7d4229ff6aaa9634b4192e9b 142 Pfam PF02381 MraZ protein, putative antitoxin-like 2 67 2.2E-14 T 22-04-2016 IPR020603 MraZ domain JE55_RS06345 d91e0b0d7d4229ff6aaa9634b4192e9b 142 Pfam PF02381 MraZ protein, putative antitoxin-like 73 127 1.4E-14 T 22-04-2016 IPR020603 MraZ domain JE55_RS06345 d91e0b0d7d4229ff6aaa9634b4192e9b 142 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 121 2.0E-66 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JE55_RS06345 d91e0b0d7d4229ff6aaa9634b4192e9b 142 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 140 4.2E-35 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 JE55_RS15520 c8a7574c6545bb783345c6b5653f103f 123 Pfam PF05666 Fels-1 Prophage Protein-like 67 119 2.4E-22 T 22-04-2016 IPR008617 Uncharacterised protein family, YcgJ JE55_RS15520 c8a7574c6545bb783345c6b5653f103f 123 Pfam PF05666 Fels-1 Prophage Protein-like 21 60 9.1E-18 T 22-04-2016 IPR008617 Uncharacterised protein family, YcgJ JE55_RS14515 43790cc6e6237c18a285f32bdbc5fa51 368 PANTHER PTHR12725:SF80 84 216 1.8E-18 T 22-04-2016 JE55_RS14515 43790cc6e6237c18a285f32bdbc5fa51 368 PANTHER PTHR12725 84 216 1.8E-18 T 22-04-2016 JE55_RS14515 43790cc6e6237c18a285f32bdbc5fa51 368 SUPERFAMILY SSF56112 29 363 1.93E-62 T 22-04-2016 IPR011009 Protein kinase-like domain JE55_RS14515 43790cc6e6237c18a285f32bdbc5fa51 368 Gene3D G3DSA:3.90.1200.10 133 337 8.2E-32 T 22-04-2016 JE55_RS14515 43790cc6e6237c18a285f32bdbc5fa51 368 Pfam PF01636 Phosphotransferase enzyme family 51 276 1.8E-55 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase JE55_RS12515 2215a430369b51283adff2623ed5fa60 318 Gene3D G3DSA:3.40.50.720 8 199 3.5E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12515 2215a430369b51283adff2623ed5fa60 318 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 191 313 3.1E-34 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS12515 2215a430369b51283adff2623ed5fa60 318 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 10 315 9.1E-72 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS12515 2215a430369b51283adff2623ed5fa60 318 Gene3D G3DSA:1.10.1040.10 200 316 7.4E-37 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS12515 2215a430369b51283adff2623ed5fa60 318 SUPERFAMILY SSF51735 10 175 1.35E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12515 2215a430369b51283adff2623ed5fa60 318 PANTHER PTHR21708 5 316 4.0E-60 T 22-04-2016 JE55_RS12515 2215a430369b51283adff2623ed5fa60 318 SUPERFAMILY SSF48179 191 314 7.48E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS12515 2215a430369b51283adff2623ed5fa60 318 Pfam PF02558 Ketopantoate reductase PanE/ApbA 11 160 1.7E-35 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS04425 3102ea144a648a7a4c8eadb315d73826 297 Pfam PF00483 Nucleotidyl transferase 4 240 1.0E-72 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 JE55_RS04425 3102ea144a648a7a4c8eadb315d73826 297 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 4 288 2.4E-158 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 JE55_RS04425 3102ea144a648a7a4c8eadb315d73826 297 PANTHER PTHR22572:SF105 4 271 5.0E-178 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 JE55_RS04425 3102ea144a648a7a4c8eadb315d73826 297 Gene3D G3DSA:3.90.550.10 2 267 1.2E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04425 3102ea144a648a7a4c8eadb315d73826 297 PANTHER PTHR22572 4 271 5.0E-178 T 22-04-2016 JE55_RS04425 3102ea144a648a7a4c8eadb315d73826 297 SUPERFAMILY SSF53448 2 288 2.7E-95 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS10140 6dc9273bd7fc8fb33f2c0fbfbfa7a9e1 705 Pfam PF05506 Domain of unknown function (DUF756) 605 686 2.7E-20 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 JE55_RS10140 6dc9273bd7fc8fb33f2c0fbfbfa7a9e1 705 Pfam PF05506 Domain of unknown function (DUF756) 505 590 1.6E-22 T 22-04-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 JE55_RS10140 6dc9273bd7fc8fb33f2c0fbfbfa7a9e1 705 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 5 698 7.2E-276 T 22-04-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 JE55_RS10140 6dc9273bd7fc8fb33f2c0fbfbfa7a9e1 705 Pfam PF04185 Phosphoesterase family 48 435 2.2E-116 T 22-04-2016 IPR007312 Phosphoesterase GO:0016788 JE55_RS10140 6dc9273bd7fc8fb33f2c0fbfbfa7a9e1 705 PANTHER PTHR31956:SF6 4 520 1.7E-164 T 22-04-2016 JE55_RS10140 6dc9273bd7fc8fb33f2c0fbfbfa7a9e1 705 PANTHER PTHR31956 4 520 1.7E-164 T 22-04-2016 JE55_RS10140 6dc9273bd7fc8fb33f2c0fbfbfa7a9e1 705 SUPERFAMILY SSF53649 383 440 1.72E-6 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 JE55_RS10140 6dc9273bd7fc8fb33f2c0fbfbfa7a9e1 705 SUPERFAMILY SSF53649 150 350 1.72E-6 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 SUPERFAMILY SSF51338 344 377 9.72E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 SUPERFAMILY SSF51338 1 49 9.72E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 Gene3D G3DSA:2.30.40.10 1 91 3.7E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 Gene3D G3DSA:2.30.40.10 313 366 8.7E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 PANTHER PTHR11271 162 361 3.6E-81 T 22-04-2016 JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 PANTHER PTHR11271 1 144 3.6E-81 T 22-04-2016 JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 SUPERFAMILY SSF51556 78 175 1.72E-15 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 SUPERFAMILY SSF51556 213 343 1.72E-15 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 3 376 2.6E-138 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 PIRSF PIRSF038971 1 377 1.8E-138 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 PANTHER PTHR11271:SF43 162 361 3.6E-81 T 22-04-2016 JE55_RS05300 c7f6756e24c3e175bd3216df66140ea6 377 PANTHER PTHR11271:SF43 1 144 3.6E-81 T 22-04-2016 JE55_RS13345 32bf5c4a96d53b4c8a5b3b6232ef1b3c 271 Pfam PF13560 Helix-turn-helix domain 18 97 8.9E-19 T 22-04-2016 JE55_RS13345 32bf5c4a96d53b4c8a5b3b6232ef1b3c 271 SUPERFAMILY SSF47413 16 93 1.36E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS13345 32bf5c4a96d53b4c8a5b3b6232ef1b3c 271 SMART SM00530 22 94 7.1E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 JE55_RS13345 32bf5c4a96d53b4c8a5b3b6232ef1b3c 271 PANTHER PTHR35010:SF2 19 271 2.2E-86 T 22-04-2016 JE55_RS13345 32bf5c4a96d53b4c8a5b3b6232ef1b3c 271 Gene3D G3DSA:1.10.260.40 14 92 9.0E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS13345 32bf5c4a96d53b4c8a5b3b6232ef1b3c 271 PANTHER PTHR35010 19 271 2.2E-86 T 22-04-2016 JE55_RS12065 47a547b00579168856a75c5b884af549 796 Pfam PF01804 Penicillin amidase 55 784 8.7E-136 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 JE55_RS12065 47a547b00579168856a75c5b884af549 796 SUPERFAMILY SSF56235 50 793 1.21E-181 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS12065 47a547b00579168856a75c5b884af549 796 Gene3D G3DSA:3.60.20.10 419 640 3.4E-73 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS12065 47a547b00579168856a75c5b884af549 796 Gene3D G3DSA:3.60.20.10 266 349 3.4E-73 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS12065 47a547b00579168856a75c5b884af549 796 PANTHER PTHR34218:SF2 1 789 1.1E-137 T 22-04-2016 JE55_RS12065 47a547b00579168856a75c5b884af549 796 Gene3D G3DSA:1.10.439.10 50 189 1.0E-46 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 JE55_RS12065 47a547b00579168856a75c5b884af549 796 PIRSF PIRSF001227 12 793 8.3E-137 T 22-04-2016 IPR014395 Penicillin acylase GO:0016811 JE55_RS12065 47a547b00579168856a75c5b884af549 796 Gene3D G3DSA:2.30.120.10 351 397 3.2E-9 T 22-04-2016 JE55_RS12065 47a547b00579168856a75c5b884af549 796 PANTHER PTHR34218 1 789 1.1E-137 T 22-04-2016 JE55_RS09650 139fbd1c30c37e7a569b0175ce48d9c3 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 460 4.1E-101 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain JE55_RS09650 139fbd1c30c37e7a569b0175ce48d9c3 542 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 86 108 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site JE55_RS09650 139fbd1c30c37e7a569b0175ce48d9c3 542 PANTHER PTHR30290 1 542 6.9E-199 T 22-04-2016 JE55_RS09650 139fbd1c30c37e7a569b0175ce48d9c3 542 Gene3D G3DSA:3.90.76.10 46 225 2.2E-48 T 22-04-2016 JE55_RS09650 139fbd1c30c37e7a569b0175ce48d9c3 542 PANTHER PTHR30290:SF14 1 542 6.9E-199 T 22-04-2016 JE55_RS09650 139fbd1c30c37e7a569b0175ce48d9c3 542 PIRSF PIRSF002741 5 541 3.4E-112 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 JE55_RS09650 139fbd1c30c37e7a569b0175ce48d9c3 542 Gene3D G3DSA:3.10.105.10 297 512 5.4E-64 T 22-04-2016 JE55_RS09650 139fbd1c30c37e7a569b0175ce48d9c3 542 SUPERFAMILY SSF53850 36 541 1.25E-146 T 22-04-2016 JE55_RS13850 7ec4c3bcba4580b567d529aec9df4f2c 411 Gene3D G3DSA:2.130.10.10 49 409 2.5E-113 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 JE55_RS13850 7ec4c3bcba4580b567d529aec9df4f2c 411 PANTHER PTHR30344 3 411 3.7E-121 T 22-04-2016 JE55_RS13850 7ec4c3bcba4580b567d529aec9df4f2c 411 SUPERFAMILY SSF51004 56 394 4.97E-52 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain JE55_RS13850 7ec4c3bcba4580b567d529aec9df4f2c 411 PANTHER PTHR30344:SF1 3 411 3.7E-121 T 22-04-2016 JE55_RS13850 7ec4c3bcba4580b567d529aec9df4f2c 411 Pfam PF10282 Lactonase, 7-bladed beta-propeller 51 407 5.7E-116 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 JE55_RS29665 e1ea8b8b3eacfe03eb60099ff26c025c 431 PANTHER PTHR24322:SF356 283 415 8.1E-34 T 22-04-2016 JE55_RS29665 e1ea8b8b3eacfe03eb60099ff26c025c 431 Pfam PF00106 short chain dehydrogenase 280 431 1.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS29665 e1ea8b8b3eacfe03eb60099ff26c025c 431 PANTHER PTHR24322 283 415 8.1E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS29665 e1ea8b8b3eacfe03eb60099ff26c025c 431 Gene3D G3DSA:3.40.50.720 274 431 7.2E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS29665 e1ea8b8b3eacfe03eb60099ff26c025c 431 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 280 297 2.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS29665 e1ea8b8b3eacfe03eb60099ff26c025c 431 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 348 359 2.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS29665 e1ea8b8b3eacfe03eb60099ff26c025c 431 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 405 421 2.3E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS29665 e1ea8b8b3eacfe03eb60099ff26c025c 431 SUPERFAMILY SSF51735 274 431 1.43E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10155 bacb9b05dfb2b32a4e0d3667ad772ef3 242 PANTHER PTHR34979 1 237 1.6E-33 T 22-04-2016 JE55_RS10155 bacb9b05dfb2b32a4e0d3667ad772ef3 242 Pfam PF03591 AzlC protein 29 170 2.1E-35 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease JE55_RS02880 b2e827f5381107cb17a970357847031e 94 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 1 89 8.0E-30 T 22-04-2016 IPR007633 Bacteriophage P2, GpY, holin JE55_RS02880 b2e827f5381107cb17a970357847031e 94 Pfam PF04550 Phage holin family 2 1 86 4.9E-35 T 22-04-2016 IPR007633 Bacteriophage P2, GpY, holin JE55_RS05730 e7d38beb92ce22cd2c344478508d66f7 172 Pfam PF01202 Shikimate kinase 9 159 5.9E-15 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS05730 e7d38beb92ce22cd2c344478508d66f7 172 PANTHER PTHR11603 1 165 1.7E-80 T 22-04-2016 JE55_RS05730 e7d38beb92ce22cd2c344478508d66f7 172 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 4 156 2.5E-54 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 JE55_RS05730 e7d38beb92ce22cd2c344478508d66f7 172 Gene3D G3DSA:3.40.50.300 1 162 9.9E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05730 e7d38beb92ce22cd2c344478508d66f7 172 SUPERFAMILY SSF52540 4 161 1.67E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06755 9d3b1ce6988e72580ddb908d1aacf238 366 PANTHER PTHR35564:SF2 96 362 1.9E-46 T 22-04-2016 JE55_RS06755 9d3b1ce6988e72580ddb908d1aacf238 366 PANTHER PTHR35564:SF2 2 76 1.9E-46 T 22-04-2016 JE55_RS06755 9d3b1ce6988e72580ddb908d1aacf238 366 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 347 4.3E-102 T 22-04-2016 IPR010732 Type VI secretion, TssG-like JE55_RS06755 9d3b1ce6988e72580ddb908d1aacf238 366 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 19 346 2.5E-90 T 22-04-2016 IPR010732 Type VI secretion, TssG-like JE55_RS06755 9d3b1ce6988e72580ddb908d1aacf238 366 PANTHER PTHR35564 96 362 1.9E-46 T 22-04-2016 JE55_RS06755 9d3b1ce6988e72580ddb908d1aacf238 366 PANTHER PTHR35564 2 76 1.9E-46 T 22-04-2016 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 PIRSF PIRSF000114 1 332 2.4E-95 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 Gene3D G3DSA:1.10.1040.10 185 327 1.5E-54 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 SUPERFAMILY SSF48179 180 332 6.8E-53 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 PANTHER PTHR11728 1 332 5.7E-117 T 22-04-2016 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 Gene3D G3DSA:3.40.50.720 1 184 2.7E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 159 6.3E-40 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 323 35.983 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 321 7.6E-49 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 5.1E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 5.1E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 5.1E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 5.1E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 5.1E-37 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 JE55_RS10710 546816ba2cc16d686c665c78c4878247 332 SUPERFAMILY SSF51735 1 181 4.11E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 104 127 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 PIRSF PIRSF000445 1 432 2.3E-152 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 PANTHER PTHR21089 65 261 6.8E-112 T 22-04-2016 JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 PANTHER PTHR21089 277 364 6.8E-112 T 22-04-2016 JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 SUPERFAMILY SSF69075 322 422 4.84E-28 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 177 310 6.9E-45 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 Gene3D G3DSA:3.40.50.720 168 316 1.8E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 419 29.439 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 7.0E-124 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 325 420 1.1E-27 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 SUPERFAMILY SSF51735 168 320 4.58E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 161 4.9E-47 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 SUPERFAMILY SSF69742 1 163 3.27E-45 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 PANTHER PTHR21089:SF3 65 261 6.8E-112 T 22-04-2016 JE55_RS06600 cce8cc2b555157af7b794b85a54bf7d6 432 PANTHER PTHR21089:SF3 277 364 6.8E-112 T 22-04-2016 JE55_RS12885 d8fc6be5802ed7cdf1626da6dd2165e5 420 Gene3D G3DSA:3.40.50.150 209 417 4.6E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS12885 d8fc6be5802ed7cdf1626da6dd2165e5 420 Gene3D G3DSA:3.30.70.1170 151 207 8.6E-14 T 22-04-2016 JE55_RS12885 d8fc6be5802ed7cdf1626da6dd2165e5 420 Pfam PF01189 16S rRNA methyltransferase RsmB/F 218 415 5.4E-53 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS12885 d8fc6be5802ed7cdf1626da6dd2165e5 420 PANTHER PTHR22807:SF33 98 417 4.5E-90 T 22-04-2016 JE55_RS12885 d8fc6be5802ed7cdf1626da6dd2165e5 420 PANTHER PTHR22807 98 417 4.5E-90 T 22-04-2016 JE55_RS12885 d8fc6be5802ed7cdf1626da6dd2165e5 420 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 297 309 4.97E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS12885 d8fc6be5802ed7cdf1626da6dd2165e5 420 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 199 213 4.97E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS12885 d8fc6be5802ed7cdf1626da6dd2165e5 420 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 347 363 4.97E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS12885 d8fc6be5802ed7cdf1626da6dd2165e5 420 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 400 417 4.97E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS12885 d8fc6be5802ed7cdf1626da6dd2165e5 420 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 228 238 4.97E-30 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 JE55_RS12885 d8fc6be5802ed7cdf1626da6dd2165e5 420 SUPERFAMILY SSF53335 113 417 3.04E-73 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS07965 71a2f3476cdfbcbbd25c506642043b2e 340 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 15 65 2.0E-19 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain JE55_RS07965 71a2f3476cdfbcbbd25c506642043b2e 340 Gene3D G3DSA:3.30.1330.60 174 285 9.9E-16 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS07965 71a2f3476cdfbcbbd25c506642043b2e 340 PANTHER PTHR30329:SF2 1 309 4.3E-108 T 22-04-2016 JE55_RS07965 71a2f3476cdfbcbbd25c506642043b2e 340 Pfam PF00691 OmpA family 181 273 1.4E-12 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS07965 71a2f3476cdfbcbbd25c506642043b2e 340 SUPERFAMILY SSF103088 178 285 3.4E-18 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS07965 71a2f3476cdfbcbbd25c506642043b2e 340 PANTHER PTHR30329 1 309 4.3E-108 T 22-04-2016 JE55_RS06435 bf5c857be61af1704e675c2d1a54f121 124 Gene3D G3DSA:2.60.40.1470 5 124 2.8E-46 T 22-04-2016 IPR007474 ApaG domain JE55_RS06435 bf5c857be61af1704e675c2d1a54f121 124 SUPERFAMILY SSF110069 5 124 3.66E-47 T 22-04-2016 IPR007474 ApaG domain JE55_RS06435 bf5c857be61af1704e675c2d1a54f121 124 Pfam PF04379 Protein of unknown function (DUF525) 16 101 4.2E-34 T 22-04-2016 IPR007474 ApaG domain JE55_RS06435 bf5c857be61af1704e675c2d1a54f121 124 Hamap MF_00791 Protein ApaG [apaG]. 1 124 31.387 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG JE55_RS06435 bf5c857be61af1704e675c2d1a54f121 124 PANTHER PTHR14289 8 121 2.8E-40 T 22-04-2016 JE55_RS02280 6107806efccf1508d8c3a98d9a2833fd 234 PANTHER PTHR30598 7 219 1.5E-35 T 22-04-2016 JE55_RS02280 6107806efccf1508d8c3a98d9a2833fd 234 Gene3D G3DSA:1.10.3480.10 3 145 2.9E-8 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone JE55_RS02280 6107806efccf1508d8c3a98d9a2833fd 234 PANTHER PTHR30598:SF1 7 219 1.5E-35 T 22-04-2016 JE55_RS02280 6107806efccf1508d8c3a98d9a2833fd 234 SUPERFAMILY SSF89155 11 173 2.75E-34 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone JE55_RS02280 6107806efccf1508d8c3a98d9a2833fd 234 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 17 170 1.8E-32 T 22-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 JE55_RS02280 6107806efccf1508d8c3a98d9a2833fd 234 Pfam PF02613 Nitrate reductase delta subunit 40 167 2.3E-14 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone JE55_RS02175 dd5d8a59196f6de1c48a3b6bdb43b05e 179 PANTHER PTHR33221 2 156 2.6E-57 T 22-04-2016 JE55_RS02175 dd5d8a59196f6de1c48a3b6bdb43b05e 179 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 135 1.1E-42 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type JE55_RS02175 dd5d8a59196f6de1c48a3b6bdb43b05e 179 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 138 1.4E-64 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 JE55_RS02175 dd5d8a59196f6de1c48a3b6bdb43b05e 179 Gene3D G3DSA:1.10.10.10 1 139 8.1E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02175 dd5d8a59196f6de1c48a3b6bdb43b05e 179 Pfam PF02082 Transcriptional regulator 1 83 8.5E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type JE55_RS02175 dd5d8a59196f6de1c48a3b6bdb43b05e 179 SUPERFAMILY SSF46785 2 136 1.58E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS02175 dd5d8a59196f6de1c48a3b6bdb43b05e 179 PANTHER PTHR33221:SF1 2 156 2.6E-57 T 22-04-2016 JE55_RS13100 fee480ff573f51ed0cf29959741cacc7 128 Pfam PF01903 CbiX 11 116 3.9E-25 T 22-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 JE55_RS13100 fee480ff573f51ed0cf29959741cacc7 128 SUPERFAMILY SSF53800 3 121 1.57E-31 T 22-04-2016 JE55_RS13100 fee480ff573f51ed0cf29959741cacc7 128 Gene3D G3DSA:3.40.50.1400 1 126 1.8E-34 T 22-04-2016 JE55_RS13100 fee480ff573f51ed0cf29959741cacc7 128 PANTHER PTHR33542 2 117 3.6E-20 T 22-04-2016 JE55_RS12110 2bf9c8d21c7af58ac5139fcf2f6b9dc7 1210 Pfam PF13555 P-loop containing region of AAA domain 3 59 8.8E-13 T 22-04-2016 JE55_RS12110 2bf9c8d21c7af58ac5139fcf2f6b9dc7 1210 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1037 1122 2.8E-14 T 22-04-2016 JE55_RS12110 2bf9c8d21c7af58ac5139fcf2f6b9dc7 1210 Gene3D G3DSA:3.40.1140.10 1 237 2.2E-18 T 22-04-2016 JE55_RS12110 2bf9c8d21c7af58ac5139fcf2f6b9dc7 1210 SUPERFAMILY SSF52540 1046 1124 6.35E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12110 2bf9c8d21c7af58ac5139fcf2f6b9dc7 1210 SUPERFAMILY SSF52540 319 394 6.35E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12110 2bf9c8d21c7af58ac5139fcf2f6b9dc7 1210 SUPERFAMILY SSF52540 1 65 6.35E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS14960 af84eb3b4738f32c4272fe0d8ade043f 212 PANTHER PTHR35802 2 212 5.3E-61 T 22-04-2016 JE55_RS14960 af84eb3b4738f32c4272fe0d8ade043f 212 SUPERFAMILY SSF50475 12 186 1.73E-37 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS14960 af84eb3b4738f32c4272fe0d8ade043f 212 Gene3D G3DSA:2.30.110.10 1 198 4.9E-73 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS14960 af84eb3b4738f32c4272fe0d8ade043f 212 PIRSF PIRSF010372 1 212 2.9E-83 T 22-04-2016 IPR007396 Transcriptional regulator PAI 2-type JE55_RS14960 af84eb3b4738f32c4272fe0d8ade043f 212 PANTHER PTHR35802:SF1 2 212 5.3E-61 T 22-04-2016 JE55_RS14960 af84eb3b4738f32c4272fe0d8ade043f 212 Pfam PF04299 Putative FMN-binding domain 1 168 2.5E-62 T 22-04-2016 IPR007396 Transcriptional regulator PAI 2-type JE55_RS10165 10c06695d0e70ad75f9e2515286c85c3 277 SUPERFAMILY SSF53474 14 268 1.67E-43 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS10165 10c06695d0e70ad75f9e2515286c85c3 277 Gene3D G3DSA:3.40.50.1820 14 269 6.8E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS10165 10c06695d0e70ad75f9e2515286c85c3 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 68 83 2.1E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS10165 10c06695d0e70ad75f9e2515286c85c3 277 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 2.1E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS10165 10c06695d0e70ad75f9e2515286c85c3 277 Pfam PF00561 alpha/beta hydrolase fold 41 163 2.1E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS10165 10c06695d0e70ad75f9e2515286c85c3 277 PANTHER PTHR10992 14 270 5.9E-29 T 22-04-2016 JE55_RS18170 17fe87a4393dfb08c8685fed3c63e8b3 268 PANTHER PTHR30269:SF14 1 268 6.3E-41 T 22-04-2016 JE55_RS18170 17fe87a4393dfb08c8685fed3c63e8b3 268 PANTHER PTHR30269 1 268 6.3E-41 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 JE55_RS18170 17fe87a4393dfb08c8685fed3c63e8b3 268 Pfam PF01925 Sulfite exporter TauE/SafE 5 258 3.9E-42 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 JE55_RS06055 67687ac8517cdcb503d78fea4bc7c45d 196 PANTHER PTHR30417 77 180 6.4E-64 T 22-04-2016 JE55_RS06055 67687ac8517cdcb503d78fea4bc7c45d 196 PANTHER PTHR30417 12 61 6.4E-64 T 22-04-2016 JE55_RS06055 67687ac8517cdcb503d78fea4bc7c45d 196 Gene3D G3DSA:3.40.80.10 11 184 4.9E-64 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 JE55_RS06055 67687ac8517cdcb503d78fea4bc7c45d 196 PANTHER PTHR30417:SF4 77 180 6.4E-64 T 22-04-2016 JE55_RS06055 67687ac8517cdcb503d78fea4bc7c45d 196 PANTHER PTHR30417:SF4 12 61 6.4E-64 T 22-04-2016 JE55_RS06055 67687ac8517cdcb503d78fea4bc7c45d 196 SUPERFAMILY SSF55846 10 184 1.83E-60 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 JE55_RS06055 67687ac8517cdcb503d78fea4bc7c45d 196 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 34 173 2.4E-18 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 JE55_RS06055 67687ac8517cdcb503d78fea4bc7c45d 196 SMART SM00644 23 172 8.8E-45 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 JE55_RS07790 f08700c5b06c9100f642e6afa5b8844a 192 Gene3D G3DSA:3.40.50.10490 4 187 1.0E-45 T 22-04-2016 JE55_RS07790 f08700c5b06c9100f642e6afa5b8844a 192 PANTHER PTHR30390 3 192 1.0E-56 T 22-04-2016 JE55_RS07790 f08700c5b06c9100f642e6afa5b8844a 192 Pfam PF13580 SIS domain 10 142 1.3E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 JE55_RS07790 f08700c5b06c9100f642e6afa5b8844a 192 PANTHER PTHR30390:SF5 3 192 1.0E-56 T 22-04-2016 JE55_RS07790 f08700c5b06c9100f642e6afa5b8844a 192 SUPERFAMILY SSF53697 3 187 1.05E-39 T 22-04-2016 JE55_RS11280 364a29ad9c24ed354cdc34d11d22ac05 116 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 43 91 1.2E-12 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS11280 364a29ad9c24ed354cdc34d11d22ac05 116 PANTHER PTHR33930:SF2 3 113 5.7E-32 T 22-04-2016 JE55_RS11280 364a29ad9c24ed354cdc34d11d22ac05 116 Pfam PF02627 Carboxymuconolactone decarboxylase family 26 108 7.0E-21 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 JE55_RS11280 364a29ad9c24ed354cdc34d11d22ac05 116 PANTHER PTHR33930 3 113 5.7E-32 T 22-04-2016 JE55_RS11280 364a29ad9c24ed354cdc34d11d22ac05 116 SUPERFAMILY SSF69118 5 112 8.51E-30 T 22-04-2016 IPR029032 AhpD-like JE55_RS11280 364a29ad9c24ed354cdc34d11d22ac05 116 Gene3D G3DSA:1.20.1290.10 5 115 8.0E-38 T 22-04-2016 IPR029032 AhpD-like JE55_RS11210 a6141573dbaa7cc5c9c3759547b24d89 204 PANTHER PTHR30086:SF3 1 204 1.4E-68 T 22-04-2016 JE55_RS11210 a6141573dbaa7cc5c9c3759547b24d89 204 PIRSF PIRSF006324 1 204 1.1E-54 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS11210 a6141573dbaa7cc5c9c3759547b24d89 204 Pfam PF01810 LysE type translocator 13 202 4.5E-39 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS11210 a6141573dbaa7cc5c9c3759547b24d89 204 PANTHER PTHR30086 1 204 1.4E-68 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS11575 9f1866647122734ef25b27e38977e66a 525 PANTHER PTHR10566 2 523 6.1E-217 T 22-04-2016 JE55_RS11575 9f1866647122734ef25b27e38977e66a 525 Pfam PF03109 ABC1 family 107 228 1.5E-31 T 22-04-2016 IPR004147 UbiB domain JE55_RS11575 9f1866647122734ef25b27e38977e66a 525 Gene3D G3DSA:3.90.1200.10 250 321 4.1E-5 T 22-04-2016 JE55_RS11575 9f1866647122734ef25b27e38977e66a 525 SUPERFAMILY SSF56112 191 434 4.98E-39 T 22-04-2016 IPR011009 Protein kinase-like domain JE55_RS11575 9f1866647122734ef25b27e38977e66a 525 SUPERFAMILY SSF56112 89 156 4.98E-39 T 22-04-2016 IPR011009 Protein kinase-like domain JE55_RS11575 9f1866647122734ef25b27e38977e66a 525 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 3 441 3.2E-165 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 JE55_RS11575 9f1866647122734ef25b27e38977e66a 525 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 523 51.566 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 JE55_RS11575 9f1866647122734ef25b27e38977e66a 525 PANTHER PTHR10566:SF79 2 523 6.1E-217 T 22-04-2016 JE55_RS15295 de69e7b3610515afe8da269af4f4f72a 357 Gene3D G3DSA:1.20.144.10 143 314 1.4E-5 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JE55_RS15295 de69e7b3610515afe8da269af4f4f72a 357 Pfam PF14378 PAP2 superfamily 126 307 8.5E-44 T 22-04-2016 IPR026841 Inositolphosphotransferase Aur1/Ipt1 JE55_RS13910 39e79eae4a906048d68869022cefbc58 596 SMART SM00382 381 566 2.2E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS13910 39e79eae4a906048d68869022cefbc58 596 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS13910 39e79eae4a906048d68869022cefbc58 596 Pfam PF00664 ABC transporter transmembrane region 39 309 2.5E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS13910 39e79eae4a906048d68869022cefbc58 596 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 24 593 6.7E-237 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 JE55_RS13910 39e79eae4a906048d68869022cefbc58 596 PANTHER PTHR24221 19 595 1.1E-216 T 22-04-2016 JE55_RS13910 39e79eae4a906048d68869022cefbc58 596 Pfam PF00005 ABC transporter 372 520 8.7E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS13910 39e79eae4a906048d68869022cefbc58 596 Gene3D G3DSA:1.20.1560.10 23 339 1.9E-71 T 22-04-2016 JE55_RS13910 39e79eae4a906048d68869022cefbc58 596 Gene3D G3DSA:3.40.50.300 352 584 2.8E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13910 39e79eae4a906048d68869022cefbc58 596 SUPERFAMILY SSF52540 344 591 1.17E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13910 39e79eae4a906048d68869022cefbc58 596 SUPERFAMILY SSF90123 24 339 8.24E-74 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 JE55_RS12990 93b7f8f27862a166cd5ee5a486c7fdc4 359 Pfam PF02254 TrkA-N domain 30 89 4.2E-6 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 JE55_RS12990 93b7f8f27862a166cd5ee5a486c7fdc4 359 SUPERFAMILY SSF51735 29 351 6.77E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12990 93b7f8f27862a166cd5ee5a486c7fdc4 359 PANTHER PTHR10366:SF430 29 137 7.2E-31 T 22-04-2016 JE55_RS12990 93b7f8f27862a166cd5ee5a486c7fdc4 359 PANTHER PTHR10366 164 350 7.2E-31 T 22-04-2016 JE55_RS12990 93b7f8f27862a166cd5ee5a486c7fdc4 359 PANTHER PTHR10366:SF430 164 350 7.2E-31 T 22-04-2016 JE55_RS12990 93b7f8f27862a166cd5ee5a486c7fdc4 359 Gene3D G3DSA:3.40.50.720 34 351 8.2E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS12990 93b7f8f27862a166cd5ee5a486c7fdc4 359 PANTHER PTHR10366 29 137 7.2E-31 T 22-04-2016 JE55_RS00875 e0657b805a80955246bfb4cb846787a2 162 Pfam PF02542 YgbB family 3 156 4.2E-65 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS00875 e0657b805a80955246bfb4cb846787a2 162 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 37 52 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS00875 e0657b805a80955246bfb4cb846787a2 162 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 3 158 37.111 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS00875 e0657b805a80955246bfb4cb846787a2 162 Gene3D G3DSA:3.30.1330.50 1 158 3.4E-72 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS00875 e0657b805a80955246bfb4cb846787a2 162 SUPERFAMILY SSF69765 1 158 1.96E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS00875 e0657b805a80955246bfb4cb846787a2 162 PANTHER PTHR32125 1 162 1.5E-59 T 22-04-2016 JE55_RS00875 e0657b805a80955246bfb4cb846787a2 162 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 4 157 4.6E-68 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 JE55_RS10670 82cbdc2878b7d9934540178ab1a9ad99 89 PANTHER PTHR33705 1 89 4.6E-40 T 22-04-2016 JE55_RS10670 82cbdc2878b7d9934540178ab1a9ad99 89 Gene3D G3DSA:3.30.1340.10 1 87 1.8E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10670 82cbdc2878b7d9934540178ab1a9ad99 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 6.7E-34 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10670 82cbdc2878b7d9934540178ab1a9ad99 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 7.1E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10670 82cbdc2878b7d9934540178ab1a9ad99 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.3E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10670 82cbdc2878b7d9934540178ab1a9ad99 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 5.3E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10670 82cbdc2878b7d9934540178ab1a9ad99 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 5.3E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10670 82cbdc2878b7d9934540178ab1a9ad99 89 PANTHER PTHR33705:SF2 1 89 4.6E-40 T 22-04-2016 JE55_RS10670 82cbdc2878b7d9934540178ab1a9ad99 89 SUPERFAMILY SSF55594 1 87 1.24E-30 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like JE55_RS10670 82cbdc2878b7d9934540178ab1a9ad99 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JE55_RS10670 82cbdc2878b7d9934540178ab1a9ad99 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site JE55_RS04415 341ee69c606cbd190b8454791f6683ba 298 Gene3D G3DSA:3.40.50.720 1 167 2.5E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04415 341ee69c606cbd190b8454791f6683ba 298 Pfam PF04321 RmlD substrate binding domain 1 295 7.7E-111 T 22-04-2016 IPR029903 RmlD-like substrate binding domain JE55_RS04415 341ee69c606cbd190b8454791f6683ba 298 PANTHER PTHR10491 1 285 6.3E-86 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family JE55_RS04415 341ee69c606cbd190b8454791f6683ba 298 PANTHER PTHR10491:SF4 1 285 6.3E-86 T 22-04-2016 JE55_RS04415 341ee69c606cbd190b8454791f6683ba 298 SUPERFAMILY SSF51735 1 295 1.15E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS04415 341ee69c606cbd190b8454791f6683ba 298 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 293 9.3E-100 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family JE55_RS04415 341ee69c606cbd190b8454791f6683ba 298 Gene3D G3DSA:3.90.25.10 168 180 2.4E-27 T 22-04-2016 JE55_RS04415 341ee69c606cbd190b8454791f6683ba 298 Gene3D G3DSA:3.90.25.10 221 285 2.4E-27 T 22-04-2016 JE55_RS15905 0791bd0c893675354e918ccf019e5a0b 306 SUPERFAMILY SSF51658 8 294 3.87E-63 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS15905 0791bd0c893675354e918ccf019e5a0b 306 Pfam PF01261 Xylose isomerase-like TIM barrel 34 225 1.4E-25 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS15905 0791bd0c893675354e918ccf019e5a0b 306 PANTHER PTHR12110:SF4 9 293 4.9E-98 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 JE55_RS15905 0791bd0c893675354e918ccf019e5a0b 306 Gene3D G3DSA:3.20.20.150 2 292 1.4E-81 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS15905 0791bd0c893675354e918ccf019e5a0b 306 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 6 292 2.4E-120 T 22-04-2016 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 JE55_RS15905 0791bd0c893675354e918ccf019e5a0b 306 PANTHER PTHR12110 9 293 4.9E-98 T 22-04-2016 JE55_RS05145 72a489451668869abf0ff8291278438e 515 Pfam PF12626 Polymerase A arginine-rich C-terminus 375 489 2.5E-42 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain JE55_RS05145 72a489451668869abf0ff8291278438e 515 PANTHER PTHR13734 54 361 5.0E-102 T 22-04-2016 JE55_RS05145 72a489451668869abf0ff8291278438e 515 PANTHER PTHR13734:SF47 54 361 5.0E-102 T 22-04-2016 JE55_RS05145 72a489451668869abf0ff8291278438e 515 PANTHER PTHR13734 377 388 5.0E-102 T 22-04-2016 JE55_RS05145 72a489451668869abf0ff8291278438e 515 PANTHER PTHR13734:SF47 377 388 5.0E-102 T 22-04-2016 JE55_RS05145 72a489451668869abf0ff8291278438e 515 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 38 492 37.353 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 JE55_RS05145 72a489451668869abf0ff8291278438e 515 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 56 500 2.1E-152 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 JE55_RS05145 72a489451668869abf0ff8291278438e 515 SUPERFAMILY SSF81301 179 231 1.2E-37 T 22-04-2016 JE55_RS05145 72a489451668869abf0ff8291278438e 515 SUPERFAMILY SSF81301 60 150 1.2E-37 T 22-04-2016 JE55_RS05145 72a489451668869abf0ff8291278438e 515 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 261 321 5.2E-22 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain JE55_RS05145 72a489451668869abf0ff8291278438e 515 Gene3D G3DSA:3.30.460.10 69 233 2.5E-48 T 22-04-2016 JE55_RS05145 72a489451668869abf0ff8291278438e 515 Pfam PF01743 Poly A polymerase head domain 87 234 8.4E-34 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 JE55_RS05145 72a489451668869abf0ff8291278438e 515 Gene3D G3DSA:1.10.3090.10 234 462 3.3E-52 T 22-04-2016 JE55_RS05145 72a489451668869abf0ff8291278438e 515 SUPERFAMILY SSF81891 232 464 4.71E-54 T 22-04-2016 JE55_RS15925 f02303673fb2162e1380c8df6a4e6b48 381 Pfam PF02653 Branched-chain amino acid transport system / permease component 68 368 2.6E-59 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS15925 f02303673fb2162e1380c8df6a4e6b48 381 PANTHER PTHR32196 10 199 5.3E-53 T 22-04-2016 JE55_RS15925 f02303673fb2162e1380c8df6a4e6b48 381 PANTHER PTHR32196 224 380 5.3E-53 T 22-04-2016 JE55_RS15925 f02303673fb2162e1380c8df6a4e6b48 381 PANTHER PTHR32196:SF21 10 199 5.3E-53 T 22-04-2016 JE55_RS15925 f02303673fb2162e1380c8df6a4e6b48 381 PANTHER PTHR32196:SF21 224 380 5.3E-53 T 22-04-2016 JE55_RS11370 b329a103e037cbae0657768486feafe7 258 SUPERFAMILY SSF53639 19 223 4.91E-60 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal JE55_RS11370 b329a103e037cbae0657768486feafe7 258 Gene3D G3DSA:3.40.225.10 20 224 3.2E-59 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal JE55_RS11370 b329a103e037cbae0657768486feafe7 258 PANTHER PTHR10672 16 258 1.4E-75 T 22-04-2016 JE55_RS11370 b329a103e037cbae0657768486feafe7 258 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 26 205 8.1E-44 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal JE55_RS11370 b329a103e037cbae0657768486feafe7 258 SMART SM01007 25 205 2.5E-54 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.441 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 PANTHER PTHR11760:SF19 2 239 6.4E-128 T 22-04-2016 JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 SUPERFAMILY SSF54814 2 106 7.33E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 5.4E-40 T 22-04-2016 JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 Gene3D G3DSA:3.30.300.20 17 107 9.8E-32 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 Gene3D G3DSA:3.30.1140.32 108 206 1.5E-45 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 PANTHER PTHR11760 2 239 6.4E-128 T 22-04-2016 JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 SUPERFAMILY SSF54821 108 206 2.35E-39 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 Pfam PF07650 KH domain 39 110 4.6E-20 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 SMART SM00322 60 125 3.5E-8 T 22-04-2016 IPR004087 K Homology domain GO:0003676 JE55_RS07355 2644e56f4bc142334393abaf0658f821 266 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 8.6E-92 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 JE55_RS09290 602f765856dfe55f301b0feea4c41c37 382 PANTHER PTHR30474 1 381 2.7E-138 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 JE55_RS09290 602f765856dfe55f301b0feea4c41c37 382 PANTHER PTHR30474:SF1 1 381 2.7E-138 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 JE55_RS09290 602f765856dfe55f301b0feea4c41c37 382 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 377 4.9E-128 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 JE55_RS09290 602f765856dfe55f301b0feea4c41c37 382 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 335 359 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 JE55_RS09290 602f765856dfe55f301b0feea4c41c37 382 Pfam PF01098 Cell cycle protein 24 378 5.1E-100 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.3E-23 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 PANTHER PTHR11404:SF8 1 192 2.0E-108 T 22-04-2016 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 5.3E-34 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 SUPERFAMILY SSF54719 81 191 1.1E-44 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 PANTHER PTHR11404 1 192 2.0E-108 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.3E-40 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 SUPERFAMILY SSF46609 1 84 1.7E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 PIRSF PIRSF000349 1 192 3.2E-86 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 JE55_RS12710 759d1289fdf977e63ca5c12ebddeb142 192 Gene3D G3DSA:1.10.287.990 20 82 1.2E-24 T 22-04-2016 JE55_RS14955 3837696932e82048749abff6af91cfad 265 Pfam PF09948 Predicted metal-binding integral membrane protein (DUF2182) 69 256 2.7E-64 T 22-04-2016 IPR018688 Protein of unknown function DUF2182, transmembrane, metal-binding JE55_RS05015 d098ccabb8a2003c8b78e71f080336c2 230 Pfam PF00483 Nucleotidyl transferase 4 225 9.9E-21 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 JE55_RS05015 d098ccabb8a2003c8b78e71f080336c2 230 PANTHER PTHR22572 3 225 2.5E-44 T 22-04-2016 JE55_RS05015 d098ccabb8a2003c8b78e71f080336c2 230 SUPERFAMILY SSF53448 4 224 6.76E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS05015 d098ccabb8a2003c8b78e71f080336c2 230 Gene3D G3DSA:3.90.550.10 2 225 7.8E-50 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS05015 d098ccabb8a2003c8b78e71f080336c2 230 PANTHER PTHR22572:SF15 3 225 2.5E-44 T 22-04-2016 JE55_RS19265 11599930a0d016b9ddde0c546f8eeeaf 338 Gene3D G3DSA:3.30.1490.20 3 79 7.4E-32 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS19265 11599930a0d016b9ddde0c546f8eeeaf 338 Gene3D G3DSA:3.50.30.10 240 336 3.7E-33 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS19265 11599930a0d016b9ddde0c546f8eeeaf 338 Gene3D G3DSA:3.30.470.20 82 239 2.2E-58 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 JE55_RS19265 11599930a0d016b9ddde0c546f8eeeaf 338 Pfam PF00391 PEP-utilising enzyme, mobile domain 269 337 1.2E-25 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS19265 11599930a0d016b9ddde0c546f8eeeaf 338 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 299 310 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 JE55_RS19265 11599930a0d016b9ddde0c546f8eeeaf 338 PANTHER PTHR22931:SF7 2 335 9.1E-164 T 22-04-2016 JE55_RS19265 11599930a0d016b9ddde0c546f8eeeaf 338 SUPERFAMILY SSF52009 234 336 1.96E-32 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 JE55_RS19265 11599930a0d016b9ddde0c546f8eeeaf 338 SUPERFAMILY SSF56059 2 270 1.41E-80 T 22-04-2016 JE55_RS19265 11599930a0d016b9ddde0c546f8eeeaf 338 PANTHER PTHR22931 2 335 9.1E-164 T 22-04-2016 JE55_RS19265 11599930a0d016b9ddde0c546f8eeeaf 338 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 4 228 3.7E-87 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 JE55_RS11440 58d5d946a9b89fa745d7a7c3465c3e50 83 Gene3D G3DSA:1.10.1200.10 1 81 9.5E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS11440 58d5d946a9b89fa745d7a7c3465c3e50 83 SUPERFAMILY SSF47336 1 79 3.8E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS11440 58d5d946a9b89fa745d7a7c3465c3e50 83 Pfam PF00550 Phosphopantetheine attachment site 4 73 1.8E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS05400 95f757e5f132ac752ed38ea18a9e7e76 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 20 40 7.3E-18 T 22-04-2016 IPR003849 Preprotein translocase YajC JE55_RS05400 95f757e5f132ac752ed38ea18a9e7e76 108 PRINTS PR01853 Bacterial YajC preprotein translocase signature 58 76 7.3E-18 T 22-04-2016 IPR003849 Preprotein translocase YajC JE55_RS05400 95f757e5f132ac752ed38ea18a9e7e76 108 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 100 9.1E-30 T 22-04-2016 IPR003849 Preprotein translocase YajC JE55_RS05400 95f757e5f132ac752ed38ea18a9e7e76 108 PANTHER PTHR33909 1 108 6.0E-33 T 22-04-2016 JE55_RS05400 95f757e5f132ac752ed38ea18a9e7e76 108 Pfam PF02699 Preprotein translocase subunit 21 97 9.6E-32 T 22-04-2016 IPR003849 Preprotein translocase YajC JE55_RS05400 95f757e5f132ac752ed38ea18a9e7e76 108 SMART SM01323 18 100 1.4E-48 T 22-04-2016 IPR003849 Preprotein translocase YajC JE55_RS05400 95f757e5f132ac752ed38ea18a9e7e76 108 PANTHER PTHR33909:SF1 1 108 6.0E-33 T 22-04-2016 JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 Gene3D G3DSA:3.40.50.300 568 712 1.2E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 PANTHER PTHR11472:SF37 32 75 3.7E-166 T 22-04-2016 JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 PANTHER PTHR11472:SF37 121 734 3.7E-166 T 22-04-2016 JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 Gene3D G3DSA:3.40.50.300 122 194 2.3E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 Gene3D G3DSA:3.40.50.300 269 319 2.3E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 PANTHER PTHR11472 32 75 3.7E-166 T 22-04-2016 JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 SUPERFAMILY SSF52540 496 510 9.46E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 SUPERFAMILY SSF52540 120 169 9.46E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 SUPERFAMILY SSF52540 543 706 9.46E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 SUPERFAMILY SSF52540 258 332 9.46E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 PANTHER PTHR11472 121 734 3.7E-166 T 22-04-2016 JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 Pfam PF13307 Helicase C-terminal domain 568 729 6.3E-33 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JE55_RS00070 b8b6b6fb3da3c45d018c8a465f20b84b 752 SMART SM00491 582 716 7.9E-37 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 JE55_RS03950 110673236d74c1f34c2d98d68cd52794 84 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 1.4E-24 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 JE55_RS03950 110673236d74c1f34c2d98d68cd52794 84 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 84 18.291 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 JE55_RS03950 110673236d74c1f34c2d98d68cd52794 84 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 82 8.4E-29 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 JE55_RS03950 110673236d74c1f34c2d98d68cd52794 84 SUPERFAMILY SSF55229 34 83 1.31E-14 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 JE55_RS03950 110673236d74c1f34c2d98d68cd52794 84 PANTHER PTHR33404 1 82 4.5E-19 T 22-04-2016 JE55_RS03950 110673236d74c1f34c2d98d68cd52794 84 Gene3D G3DSA:3.30.1070.10 35 83 4.0E-20 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 JE55_RS06910 d7d2dfb3d87cf96f279bdf2c2ed92b3d 252 PANTHER PTHR10266 44 171 3.3E-38 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 JE55_RS06910 d7d2dfb3d87cf96f279bdf2c2ed92b3d 252 PANTHER PTHR10266 193 252 3.3E-38 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 JE55_RS06910 d7d2dfb3d87cf96f279bdf2c2ed92b3d 252 SUPERFAMILY SSF46626 24 165 1.07E-49 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS06910 d7d2dfb3d87cf96f279bdf2c2ed92b3d 252 SUPERFAMILY SSF46626 193 216 1.07E-49 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS06910 d7d2dfb3d87cf96f279bdf2c2ed92b3d 252 Gene3D G3DSA:1.20.5.100 221 252 2.0E-8 T 22-04-2016 JE55_RS06910 d7d2dfb3d87cf96f279bdf2c2ed92b3d 252 Pfam PF02167 Cytochrome C1 family 44 250 1.7E-17 T 22-04-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 JE55_RS06910 d7d2dfb3d87cf96f279bdf2c2ed92b3d 252 Gene3D G3DSA:1.10.760.10 27 217 1.8E-61 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS06910 d7d2dfb3d87cf96f279bdf2c2ed92b3d 252 PANTHER PTHR10266:SF3 44 171 3.3E-38 T 22-04-2016 JE55_RS06910 d7d2dfb3d87cf96f279bdf2c2ed92b3d 252 PANTHER PTHR10266:SF3 193 252 3.3E-38 T 22-04-2016 JE55_RS20700 523c5baeebfdd9d9139c7de404ff61e2 283 PANTHER PTHR30217:SF3 208 283 2.0E-144 T 22-04-2016 JE55_RS20700 523c5baeebfdd9d9139c7de404ff61e2 283 PANTHER PTHR30217:SF3 1 186 2.0E-144 T 22-04-2016 JE55_RS20700 523c5baeebfdd9d9139c7de404ff61e2 283 Pfam PF01136 Peptidase family U32 44 283 2.0E-71 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS20700 523c5baeebfdd9d9139c7de404ff61e2 283 ProSitePatterns PS01276 Peptidase family U32 signature. 129 147 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS20700 523c5baeebfdd9d9139c7de404ff61e2 283 PANTHER PTHR30217 208 283 2.0E-144 T 22-04-2016 JE55_RS20700 523c5baeebfdd9d9139c7de404ff61e2 283 PANTHER PTHR30217 1 186 2.0E-144 T 22-04-2016 JE55_RS11290 4106b07b6cc3362f8fdbaf20184a13b1 1088 SUPERFAMILY SSF48452 37 74 3.42E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS11290 4106b07b6cc3362f8fdbaf20184a13b1 1088 SUPERFAMILY SSF48452 309 392 3.42E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 PANTHER PTHR24322:SF317 159 191 5.1E-60 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 PANTHER PTHR24322:SF317 11 143 5.1E-60 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 PIRSF PIRSF000094 1 260 8.2E-112 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.5E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.5E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.5E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 6.5E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 Gene3D G3DSA:3.40.50.720 6 201 1.8E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 PANTHER PTHR24322 159 191 5.1E-60 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 PANTHER PTHR24322 11 143 5.1E-60 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 1.1E-86 T 22-04-2016 JE55_RS01465 3dd37533584fbd2687baac866a575a4e 263 SUPERFAMILY SSF51735 5 253 3.25E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS05695 5613c6332a5181acc2566dae256a5bc8 225 SUPERFAMILY SSF161098 14 215 5.89E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS05695 5613c6332a5181acc2566dae256a5bc8 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 224 5.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS05695 5613c6332a5181acc2566dae256a5bc8 225 PANTHER PTHR30614 1 225 3.7E-123 T 22-04-2016 JE55_RS05695 5613c6332a5181acc2566dae256a5bc8 225 Gene3D G3DSA:1.10.3720.10 14 224 1.4E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS05695 5613c6332a5181acc2566dae256a5bc8 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 5.3E-24 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 JE55_RS05695 5613c6332a5181acc2566dae256a5bc8 225 PANTHER PTHR30614:SF1 1 225 3.7E-123 T 22-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 JE55_RS03600 0e2bbdb3f9b48456fbec6a344ba1e78c 228 Hamap MF_00238 Cytidylate kinase [cmk]. 11 225 31.876 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 JE55_RS03600 0e2bbdb3f9b48456fbec6a344ba1e78c 228 PANTHER PTHR21299 11 227 2.7E-60 T 22-04-2016 JE55_RS03600 0e2bbdb3f9b48456fbec6a344ba1e78c 228 TIGRFAM TIGR00017 cmk: cytidylate kinase 11 219 2.7E-71 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 JE55_RS03600 0e2bbdb3f9b48456fbec6a344ba1e78c 228 SUPERFAMILY SSF52540 11 223 1.88E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03600 0e2bbdb3f9b48456fbec6a344ba1e78c 228 Pfam PF02224 Cytidylate kinase 13 221 3.3E-72 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 JE55_RS03600 0e2bbdb3f9b48456fbec6a344ba1e78c 228 Gene3D G3DSA:3.40.50.300 11 222 1.4E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00455 5f4f95992b4abc39e3572944dc133baa 141 Gene3D G3DSA:2.60.40.420 45 140 1.3E-17 T 22-04-2016 IPR008972 Cupredoxin JE55_RS00455 5f4f95992b4abc39e3572944dc133baa 141 SUPERFAMILY SSF49503 46 140 4.74E-19 T 22-04-2016 IPR008972 Cupredoxin JE55_RS00455 5f4f95992b4abc39e3572944dc133baa 141 Pfam PF13473 Cupredoxin-like domain 37 140 5.7E-8 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain JE55_RS08995 ababbcdacaf999ea9eae7bdab94aaa41 155 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 26 147 15.776 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JE55_RS08995 ababbcdacaf999ea9eae7bdab94aaa41 155 Gene3D G3DSA:3.30.230.10 25 115 7.8E-23 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS08995 ababbcdacaf999ea9eae7bdab94aaa41 155 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 34 105 1.0E-14 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JE55_RS08995 ababbcdacaf999ea9eae7bdab94aaa41 155 Pfam PF00825 Ribonuclease P 26 114 1.2E-21 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JE55_RS08995 ababbcdacaf999ea9eae7bdab94aaa41 155 PANTHER PTHR33992 22 149 2.2E-14 T 22-04-2016 JE55_RS08995 ababbcdacaf999ea9eae7bdab94aaa41 155 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 31 105 1.5E-12 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 JE55_RS08995 ababbcdacaf999ea9eae7bdab94aaa41 155 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 75 89 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 JE55_RS08995 ababbcdacaf999ea9eae7bdab94aaa41 155 SUPERFAMILY SSF54211 25 112 5.31E-19 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS12225 92773dfd513bb5bdb4e6b1e7dd8cf46a 572 PANTHER PTHR22726:SF10 91 420 2.5E-59 T 22-04-2016 JE55_RS12225 92773dfd513bb5bdb4e6b1e7dd8cf46a 572 PANTHER PTHR22726 91 420 2.5E-59 T 22-04-2016 JE55_RS12225 92773dfd513bb5bdb4e6b1e7dd8cf46a 572 Gene3D G3DSA:3.30.2010.10 133 215 6.2E-17 T 22-04-2016 JE55_RS12225 92773dfd513bb5bdb4e6b1e7dd8cf46a 572 Pfam PF01435 Peptidase family M48 147 325 1.8E-31 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JE55_RS12225 92773dfd513bb5bdb4e6b1e7dd8cf46a 572 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 48 563 30.684 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 JE55_RS29135 ed1a5f8b4f23affcb867b9a6b14f70f7 437 Pfam PF00912 Transglycosylase 70 257 5.6E-26 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 JE55_RS29135 ed1a5f8b4f23affcb867b9a6b14f70f7 437 Gene3D G3DSA:3.40.710.10 304 437 1.8E-8 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like JE55_RS29135 ed1a5f8b4f23affcb867b9a6b14f70f7 437 SUPERFAMILY SSF53955 72 222 1.01E-10 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS29135 ed1a5f8b4f23affcb867b9a6b14f70f7 437 Gene3D G3DSA:1.10.3810.10 73 222 1.1E-7 T 22-04-2016 JE55_RS13520 7d1ed268e938fb433c387bfe68611d4d 203 Pfam PF13488 Glycine zipper 74 118 9.6E-9 T 22-04-2016 JE55_RS16145 64776cafd1b195e24734e944832472fc 366 Gene3D G3DSA:3.20.20.370 79 355 1.0E-68 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 JE55_RS16145 64776cafd1b195e24734e944832472fc 366 SUPERFAMILY SSF88713 81 354 1.41E-61 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JE55_RS16145 64776cafd1b195e24734e944832472fc 366 PANTHER PTHR10587 133 366 4.9E-47 T 22-04-2016 JE55_RS16145 64776cafd1b195e24734e944832472fc 366 PANTHER PTHR10587:SF71 133 366 4.9E-47 T 22-04-2016 JE55_RS16145 64776cafd1b195e24734e944832472fc 366 Pfam PF01522 Polysaccharide deacetylase 133 244 1.1E-18 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 JE55_RS03635 53eded235d1b4a50c670a9144f28ea20 232 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 6 231 37.714 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 JE55_RS03635 53eded235d1b4a50c670a9144f28ea20 232 PANTHER PTHR10108:SF910 3 229 2.8E-106 T 22-04-2016 JE55_RS03635 53eded235d1b4a50c670a9144f28ea20 232 Pfam PF13489 Methyltransferase domain 47 201 1.3E-24 T 22-04-2016 JE55_RS03635 53eded235d1b4a50c670a9144f28ea20 232 PANTHER PTHR10108 3 229 2.8E-106 T 22-04-2016 JE55_RS03635 53eded235d1b4a50c670a9144f28ea20 232 Gene3D G3DSA:3.40.50.150 19 211 5.4E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS03635 53eded235d1b4a50c670a9144f28ea20 232 SUPERFAMILY SSF53335 10 230 5.68E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS03635 53eded235d1b4a50c670a9144f28ea20 232 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 8 225 3.1E-85 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 JE55_RS04550 786fe410c74aa6ac07a08be5d4fcefee 175 Pfam PF13673 Acetyltransferase (GNAT) domain 54 153 1.2E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS04550 786fe410c74aa6ac07a08be5d4fcefee 175 Gene3D G3DSA:3.40.630.30 7 175 1.9E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS04550 786fe410c74aa6ac07a08be5d4fcefee 175 PANTHER PTHR23091 7 157 2.0E-15 T 22-04-2016 JE55_RS04550 786fe410c74aa6ac07a08be5d4fcefee 175 SUPERFAMILY SSF55729 7 174 2.96E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS00470 cd707bc9d7ae36a2d74371ef8b658123 262 PANTHER PTHR12110:SF3 1 257 4.4E-93 T 22-04-2016 JE55_RS00470 cd707bc9d7ae36a2d74371ef8b658123 262 PANTHER PTHR12110 1 257 4.4E-93 T 22-04-2016 JE55_RS00470 cd707bc9d7ae36a2d74371ef8b658123 262 Gene3D G3DSA:3.20.20.150 1 258 3.9E-94 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS00470 cd707bc9d7ae36a2d74371ef8b658123 262 TIGRFAM TIGR03234 OH-pyruv-isom: hydroxypyruvate isomerase 2 254 2.4E-116 T 22-04-2016 IPR017643 Hydroxypyruvate isomerase KEGG: 00630+5.3.1.22 JE55_RS00470 cd707bc9d7ae36a2d74371ef8b658123 262 PIRSF PIRSF006241 1 261 4.1E-93 T 22-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 JE55_RS00470 cd707bc9d7ae36a2d74371ef8b658123 262 SUPERFAMILY SSF51658 1 257 3.04E-86 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS00470 cd707bc9d7ae36a2d74371ef8b658123 262 Pfam PF01261 Xylose isomerase-like TIM barrel 21 219 2.5E-35 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain JE55_RS03405 bf04557b606e5148d5c9f017f81ad76f 493 PANTHER PTHR33408 3 489 1.3E-31 T 22-04-2016 JE55_RS03405 bf04557b606e5148d5c9f017f81ad76f 493 Pfam PF05598 Transposase domain (DUF772) 58 134 3.3E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal JE55_RS03405 bf04557b606e5148d5c9f017f81ad76f 493 Pfam PF13751 Transposase DDE domain 331 449 1.6E-28 T 22-04-2016 IPR025668 Transposase DDE domain JE55_RS11360 5cbe644bb11b55de449587e24cb7a241 120 SUPERFAMILY SSF56209 8 68 3.79E-8 T 22-04-2016 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma GO:0003824|GO:0006807|GO:0046914 KEGG: 00364+4.2.1.84|KEGG: 00380+4.2.1.84|KEGG: 00627+4.2.1.84|KEGG: 00643+4.2.1.84|MetaCyc: PWY-5025|MetaCyc: PWY-581|MetaCyc: PWY-7308 JE55_RS11360 5cbe644bb11b55de449587e24cb7a241 120 TIGRFAM TIGR03795 RNP_Burkhold: ribosomal natural product, two-chain TOMM family 4 116 7.0E-53 T 22-04-2016 IPR022261 Ribosomal natural product, two-chain TOMM family JE55_RS05085 7f19356749fe139aff434eaf79cdcdd1 383 Gene3D G3DSA:3.40.50.2000 203 326 9.0E-13 T 22-04-2016 JE55_RS05085 7f19356749fe139aff434eaf79cdcdd1 383 PANTHER PTHR12526 96 375 2.0E-28 T 22-04-2016 JE55_RS05085 7f19356749fe139aff434eaf79cdcdd1 383 Pfam PF00534 Glycosyl transferases group 1 203 325 9.4E-15 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS05085 7f19356749fe139aff434eaf79cdcdd1 383 PANTHER PTHR12526:SF399 96 375 2.0E-28 T 22-04-2016 JE55_RS05085 7f19356749fe139aff434eaf79cdcdd1 383 SUPERFAMILY SSF53756 60 375 2.56E-40 T 22-04-2016 JE55_RS04170 767a7631ac982f6b6b5b928e5851534b 187 Pfam PF02325 YGGT family 108 174 3.3E-17 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 JE55_RS04170 767a7631ac982f6b6b5b928e5851534b 187 Pfam PF02325 YGGT family 11 78 3.0E-15 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 JE55_RS04170 767a7631ac982f6b6b5b928e5851534b 187 PANTHER PTHR33219:SF5 8 177 8.4E-39 T 22-04-2016 JE55_RS04170 767a7631ac982f6b6b5b928e5851534b 187 PANTHER PTHR33219 8 177 8.4E-39 T 22-04-2016 JE55_RS12530 6cdd5cf4b2eb3b8131e31e5610957259 306 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 43 306 41.158 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 JE55_RS12530 6cdd5cf4b2eb3b8131e31e5610957259 306 Pfam PF03301 Tryptophan 2,3-dioxygenase 39 306 3.6E-67 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 JE55_RS12530 6cdd5cf4b2eb3b8131e31e5610957259 306 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 43 306 1.5E-135 T 22-04-2016 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 JE55_RS12530 6cdd5cf4b2eb3b8131e31e5610957259 306 SUPERFAMILY SSF140959 49 306 7.59E-102 T 22-04-2016 JE55_RS12530 6cdd5cf4b2eb3b8131e31e5610957259 306 PANTHER PTHR10138 11 306 3.5E-105 T 22-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 JE55_RS12530 6cdd5cf4b2eb3b8131e31e5610957259 306 PANTHER PTHR10138:SF0 11 306 3.5E-105 T 22-04-2016 JE55_RS00840 cecc091790cb74c3d34649c8a808175e 418 Pfam PF07394 Protein of unknown function (DUF1501) 55 405 7.9E-34 T 22-04-2016 IPR010869 Protein of unknown function DUF1501 JE55_RS07855 53f61f025b847cd51fc7ac0765364268 230 SUPERFAMILY SSF53474 2 229 2.75E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS07855 53f61f025b847cd51fc7ac0765364268 230 PANTHER PTHR17630 5 230 4.2E-47 T 22-04-2016 JE55_RS07855 53f61f025b847cd51fc7ac0765364268 230 Gene3D G3DSA:3.40.50.1820 4 230 6.8E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS07855 53f61f025b847cd51fc7ac0765364268 230 Pfam PF01738 Dienelactone hydrolase family 15 228 2.8E-57 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 JE55_RS05880 316d4b5bc6d0731950d4f2d10cfbc5ce 143 Gene3D G3DSA:3.10.450.30 49 142 7.3E-40 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 JE55_RS05880 316d4b5bc6d0731950d4f2d10cfbc5ce 143 Pfam PF00545 ribonuclease 57 140 2.4E-28 T 22-04-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 JE55_RS05880 316d4b5bc6d0731950d4f2d10cfbc5ce 143 SUPERFAMILY SSF53933 49 141 1.66E-35 T 22-04-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 JE55_RS03170 29bf1d40caecfacdbd62b65e81424d93 79 Pfam PF00550 Phosphopantetheine attachment site 6 72 5.3E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS03170 29bf1d40caecfacdbd62b65e81424d93 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 74 7.3E-36 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 JE55_RS03170 29bf1d40caecfacdbd62b65e81424d93 79 SUPERFAMILY SSF47336 2 76 1.57E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS03170 29bf1d40caecfacdbd62b65e81424d93 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.537 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 JE55_RS03170 29bf1d40caecfacdbd62b65e81424d93 79 PANTHER PTHR20863 4 73 2.9E-30 T 22-04-2016 JE55_RS03170 29bf1d40caecfacdbd62b65e81424d93 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 1.0E-13 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 JE55_RS03170 29bf1d40caecfacdbd62b65e81424d93 79 Gene3D G3DSA:1.10.1200.10 3 75 4.5E-35 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS03170 29bf1d40caecfacdbd62b65e81424d93 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site JE55_RS13170 ddba5f97a1ca5e95e9bf98505bee8466 685 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 221 2.9E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 JE55_RS13170 ddba5f97a1ca5e95e9bf98505bee8466 685 Pfam PF00593 TonB dependent receptor 464 680 5.9E-27 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 JE55_RS13170 ddba5f97a1ca5e95e9bf98505bee8466 685 SUPERFAMILY SSF56935 104 682 3.45E-103 T 22-04-2016 JE55_RS13170 ddba5f97a1ca5e95e9bf98505bee8466 685 PANTHER PTHR32552 41 684 8.8E-43 T 22-04-2016 JE55_RS13170 ddba5f97a1ca5e95e9bf98505bee8466 685 Gene3D G3DSA:2.40.170.20 228 683 3.2E-80 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 JE55_RS13170 ddba5f97a1ca5e95e9bf98505bee8466 685 Gene3D G3DSA:2.170.130.10 93 227 1.2E-32 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 JE55_RS17525 5d6bb979ff6732abc729946972194e6a 87 PANTHER PTHR33609 1 86 1.7E-40 T 22-04-2016 JE55_RS17525 5d6bb979ff6732abc729946972194e6a 87 Gene3D G3DSA:1.10.10.60 7 82 1.2E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS17525 5d6bb979ff6732abc729946972194e6a 87 Pfam PF01527 Transposase 2 70 1.0E-21 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 JE55_RS17525 5d6bb979ff6732abc729946972194e6a 87 SUPERFAMILY SSF46689 1 68 6.27E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 SUPERFAMILY SSF54106 412 455 1.12E-5 T 22-04-2016 IPR018392 LysM domain JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 PANTHER PTHR21666:SF206 62 454 2.1E-103 T 22-04-2016 JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 127 155 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 Gene3D G3DSA:1.10.530.10 102 264 2.6E-47 T 22-04-2016 JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 PANTHER PTHR21666 62 454 2.1E-103 T 22-04-2016 JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 Pfam PF01464 Transglycosylase SLT domain 113 216 4.3E-24 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 Gene3D G3DSA:3.10.350.10 334 380 1.3E-6 T 22-04-2016 IPR018392 LysM domain JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 Gene3D G3DSA:3.10.350.10 414 455 4.2E-8 T 22-04-2016 IPR018392 LysM domain JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 SMART SM00257 336 380 0.51 T 22-04-2016 IPR018392 LysM domain JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 SMART SM00257 412 455 0.0058 T 22-04-2016 IPR018392 LysM domain JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 SUPERFAMILY SSF53955 106 266 7.31E-43 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 Pfam PF01476 LysM domain 346 380 0.0029 T 22-04-2016 IPR018392 LysM domain JE55_RS15175 7312590c4c11d2d7ed64eae0d02235c8 530 Pfam PF01476 LysM domain 414 453 0.013 T 22-04-2016 IPR018392 LysM domain JE55_RS10925 2d1619aae3facb014ff75b03413a977c 327 SUPERFAMILY SSF47240 84 312 6.72E-58 T 22-04-2016 IPR009078 Ferritin-like superfamily JE55_RS10925 2d1619aae3facb014ff75b03413a977c 327 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 27 300 1.1E-12 T 22-04-2016 IPR025859 P-aminobenzoate N-oxygenase AurF JE55_RS10925 2d1619aae3facb014ff75b03413a977c 327 Gene3D G3DSA:1.10.620.20 32 257 1.6E-13 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 JE55_RS17920 59a28b410054082c2c88ed3e9a473b23 304 Pfam PF00005 ABC transporter 18 158 2.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS17920 59a28b410054082c2c88ed3e9a473b23 304 SMART SM00382 26 206 1.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS17920 59a28b410054082c2c88ed3e9a473b23 304 PANTHER PTHR24220:SF595 275 295 1.3E-93 T 22-04-2016 JE55_RS17920 59a28b410054082c2c88ed3e9a473b23 304 PANTHER PTHR24220:SF595 3 234 1.3E-93 T 22-04-2016 JE55_RS17920 59a28b410054082c2c88ed3e9a473b23 304 Gene3D G3DSA:3.40.50.300 1 228 5.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17920 59a28b410054082c2c88ed3e9a473b23 304 PANTHER PTHR24220 275 295 1.3E-93 T 22-04-2016 JE55_RS17920 59a28b410054082c2c88ed3e9a473b23 304 PANTHER PTHR24220 3 234 1.3E-93 T 22-04-2016 JE55_RS17920 59a28b410054082c2c88ed3e9a473b23 304 SUPERFAMILY SSF52540 2 219 3.06E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17920 59a28b410054082c2c88ed3e9a473b23 304 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS10585 e1d495b541ba435c09d5153251bc8460 101 Pfam PF04341 Protein of unknown function, DUF485 13 97 3.8E-28 T 22-04-2016 IPR007436 Protein of unknown function DUF485 JE55_RS10585 e1d495b541ba435c09d5153251bc8460 101 PANTHER PTHR38598 2 97 3.3E-23 T 22-04-2016 JE55_RS14475 d9b84e56bb4cdb61249b3821a11fe05b 140 PIRSF PIRSF032131 1 137 3.0E-47 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 JE55_RS14475 d9b84e56bb4cdb61249b3821a11fe05b 140 Pfam PF06676 Protein of unknown function (DUF1178) 1 133 4.9E-50 T 22-04-2016 IPR009562 Protein of unknown function DUF1178 JE55_RS26665 2885066717fe9cf9d1fbf6baf1fb80d1 168 Pfam PF03717 Penicillin-binding Protein dimerisation domain 104 162 7.7E-10 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JE55_RS26665 2885066717fe9cf9d1fbf6baf1fb80d1 168 PANTHER PTHR30627:SF2 45 161 2.8E-27 T 22-04-2016 JE55_RS26665 2885066717fe9cf9d1fbf6baf1fb80d1 168 SUPERFAMILY SSF56519 96 161 1.96E-13 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 JE55_RS26665 2885066717fe9cf9d1fbf6baf1fb80d1 168 PANTHER PTHR30627 45 161 2.8E-27 T 22-04-2016 JE55_RS06470 de514b973008e216ca060bd6edb8f107 213 Pfam PF01928 CYTH domain 3 203 2.4E-34 T 22-04-2016 IPR023577 CYTH domain JE55_RS06470 de514b973008e216ca060bd6edb8f107 213 SMART SM01118 2 209 9.1E-40 T 22-04-2016 IPR023577 CYTH domain JE55_RS06470 de514b973008e216ca060bd6edb8f107 213 PANTHER PTHR39569:SF1 2 209 7.5E-47 T 22-04-2016 JE55_RS06470 de514b973008e216ca060bd6edb8f107 213 PANTHER PTHR39569 2 209 7.5E-47 T 22-04-2016 JE55_RS06470 de514b973008e216ca060bd6edb8f107 213 SUPERFAMILY SSF55154 1 207 1.8E-44 T 22-04-2016 IPR033469 CYTH-like domain JE55_RS06470 de514b973008e216ca060bd6edb8f107 213 Gene3D G3DSA:2.40.320.10 1 207 7.8E-42 T 22-04-2016 IPR023577 CYTH domain JE55_RS13530 05eb8c850b229316ee0ab6cba223bb3f 170 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 27 164 1.2E-41 T 22-04-2016 IPR005247 YbhB/YbcL JE55_RS13530 05eb8c850b229316ee0ab6cba223bb3f 170 Gene3D G3DSA:3.90.280.10 3 167 4.1E-52 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein JE55_RS13530 05eb8c850b229316ee0ab6cba223bb3f 170 Pfam PF01161 Phosphatidylethanolamine-binding protein 28 164 5.9E-35 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein JE55_RS13530 05eb8c850b229316ee0ab6cba223bb3f 170 PANTHER PTHR30289 20 167 9.3E-59 T 22-04-2016 JE55_RS13530 05eb8c850b229316ee0ab6cba223bb3f 170 PANTHER PTHR30289:SF0 20 167 9.3E-59 T 22-04-2016 JE55_RS13530 05eb8c850b229316ee0ab6cba223bb3f 170 SUPERFAMILY SSF49777 4 166 5.23E-49 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein JE55_RS18175 06b4219a8fc256a65d786565519f9cb3 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 266 2.3E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS18175 06b4219a8fc256a65d786565519f9cb3 272 Gene3D G3DSA:1.10.3720.10 8 267 4.6E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS18175 06b4219a8fc256a65d786565519f9cb3 272 SUPERFAMILY SSF161098 5 263 2.15E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS18175 06b4219a8fc256a65d786565519f9cb3 272 PANTHER PTHR30222 11 270 2.8E-71 T 22-04-2016 JE55_RS18175 06b4219a8fc256a65d786565519f9cb3 272 PANTHER PTHR30222:SF1 11 270 2.8E-71 T 22-04-2016 JE55_RS01540 21d195964f98ed6ac5425efc355846f3 272 SUPERFAMILY SSF53448 158 251 1.55E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS01540 21d195964f98ed6ac5425efc355846f3 272 SUPERFAMILY SSF53448 2 122 1.55E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS01540 21d195964f98ed6ac5425efc355846f3 272 Gene3D G3DSA:3.90.550.10 2 244 1.8E-28 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS01540 21d195964f98ed6ac5425efc355846f3 272 Pfam PF10111 Glycosyltransferase like family 2 31 222 5.8E-12 T 22-04-2016 IPR019290 Glycosyltransferase 2-like, prokaryotic type JE55_RS00440 e77350298ac07f7df0254f91c39aedad 354 Pfam PF13490 Putative zinc-finger 3 37 4.8E-9 T 22-04-2016 IPR027383 Putative zinc-finger JE55_RS13710 6f6a5dd288ac617b456c359a33916723 402 PANTHER PTHR33567 16 401 2.1E-38 T 22-04-2016 JE55_RS13710 6f6a5dd288ac617b456c359a33916723 402 Pfam PF02417 Chromate transporter 18 182 7.6E-20 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 JE55_RS13710 6f6a5dd288ac617b456c359a33916723 402 Pfam PF02417 Chromate transporter 236 389 2.2E-25 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 JE55_RS13710 6f6a5dd288ac617b456c359a33916723 402 PIRSF PIRSF004810 1 399 1.1E-93 T 22-04-2016 IPR014047 Chromate transporter, long chain JE55_RS06645 66a5d89ee4fae0abaa600d58292d5eab 201 SUPERFAMILY SSF55469 7 196 6.15E-50 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 JE55_RS06645 66a5d89ee4fae0abaa600d58292d5eab 201 Gene3D G3DSA:3.40.109.10 8 196 2.4E-52 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 JE55_RS06645 66a5d89ee4fae0abaa600d58292d5eab 201 PANTHER PTHR23026 9 197 8.3E-35 T 22-04-2016 JE55_RS06645 66a5d89ee4fae0abaa600d58292d5eab 201 Pfam PF00881 Nitroreductase family 16 160 2.2E-26 T 22-04-2016 IPR029479 Nitroreductase JE55_RS00230 3712f15a526a9e83c0b1edd931ddd80a 108 PANTHER PTHR33449 1 108 3.4E-48 T 22-04-2016 JE55_RS00230 3712f15a526a9e83c0b1edd931ddd80a 108 PANTHER PTHR33449:SF1 1 108 3.4E-48 T 22-04-2016 JE55_RS00230 3712f15a526a9e83c0b1edd931ddd80a 108 Gene3D G3DSA:3.30.1310.10 1 108 2.0E-50 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family JE55_RS00230 3712f15a526a9e83c0b1edd931ddd80a 108 SUPERFAMILY SSF82607 10 102 7.19E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family JE55_RS00230 3712f15a526a9e83c0b1edd931ddd80a 108 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 97 23.069 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family JE55_RS00230 3712f15a526a9e83c0b1edd931ddd80a 108 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 9.6E-34 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family JE55_RS00230 3712f15a526a9e83c0b1edd931ddd80a 108 Pfam PF02575 YbaB/EbfC DNA-binding family 10 98 1.2E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family JE55_RS00230 3712f15a526a9e83c0b1edd931ddd80a 108 PIRSF PIRSF004555 2 108 3.6E-38 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family JE55_RS09205 915a57c0302da6a8a3dcaa8b521f9855 123 SUPERFAMILY SSF52833 20 102 5.95E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS09205 915a57c0302da6a8a3dcaa8b521f9855 123 Pfam PF00085 Thioredoxin 15 83 1.2E-9 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 JE55_RS09205 915a57c0302da6a8a3dcaa8b521f9855 123 Gene3D G3DSA:3.40.30.10 19 82 1.5E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS03105 c5c5dcd3dd8d9bc401297f4f000fc2ce 257 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 13 245 9.5E-95 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 JE55_RS03105 c5c5dcd3dd8d9bc401297f4f000fc2ce 257 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 250 128.749 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 JE55_RS03105 c5c5dcd3dd8d9bc401297f4f000fc2ce 257 Gene3D G3DSA:3.20.20.70 11 248 1.7E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS03105 c5c5dcd3dd8d9bc401297f4f000fc2ce 257 PANTHER PTHR30456 9 252 7.8E-136 T 22-04-2016 JE55_RS03105 c5c5dcd3dd8d9bc401297f4f000fc2ce 257 PANTHER PTHR30456:SF0 9 252 7.8E-136 T 22-04-2016 JE55_RS03105 c5c5dcd3dd8d9bc401297f4f000fc2ce 257 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 13 245 1.8E-103 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 JE55_RS03105 c5c5dcd3dd8d9bc401297f4f000fc2ce 257 SUPERFAMILY SSF63892 11 247 3.4E-99 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 JE55_RS05285 88158f83b16d61e29a13ed2f5e47077d 271 PANTHER PTHR30043 21 269 1.6E-97 T 22-04-2016 JE55_RS05285 88158f83b16d61e29a13ed2f5e47077d 271 Gene3D G3DSA:1.10.3720.10 76 269 9.9E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS05285 88158f83b16d61e29a13ed2f5e47077d 271 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 23 270 4.8E-89 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 JE55_RS05285 88158f83b16d61e29a13ed2f5e47077d 271 PANTHER PTHR30043:SF1 21 269 1.6E-97 T 22-04-2016 JE55_RS05285 88158f83b16d61e29a13ed2f5e47077d 271 SUPERFAMILY SSF161098 75 260 1.06E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS05285 88158f83b16d61e29a13ed2f5e47077d 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 266 2.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS11805 9998de0f4066c7dc5b655d42f1b08220 435 PANTHER PTHR21090:SF5 1 434 5.3E-27 T 22-04-2016 JE55_RS11805 9998de0f4066c7dc5b655d42f1b08220 435 SUPERFAMILY SSF55205 1 434 8.83E-61 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 JE55_RS11805 9998de0f4066c7dc5b655d42f1b08220 435 PIRSF PIRSF000505 1 435 1.1E-50 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 JE55_RS11805 9998de0f4066c7dc5b655d42f1b08220 435 Gene3D G3DSA:3.65.10.10 203 434 3.9E-19 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS11805 9998de0f4066c7dc5b655d42f1b08220 435 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 427 8.4E-34 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS11805 9998de0f4066c7dc5b655d42f1b08220 435 PANTHER PTHR21090 1 434 5.3E-27 T 22-04-2016 JE55_RS11805 9998de0f4066c7dc5b655d42f1b08220 435 Gene3D G3DSA:3.65.10.10 21 202 1.0E-18 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 JE55_RS08730 f4b51fd2a136b741ff8da617202efcc2 240 Pfam PF04172 LrgB-like family 25 236 6.0E-68 T 22-04-2016 IPR007300 CidB/LrgB family JE55_RS08730 f4b51fd2a136b741ff8da617202efcc2 240 PANTHER PTHR30249 21 238 1.3E-93 T 22-04-2016 JE55_RS08730 f4b51fd2a136b741ff8da617202efcc2 240 PANTHER PTHR30249:SF4 21 238 1.3E-93 T 22-04-2016 JE55_RS05160 6cc72d6994dc768f51f47c92e43c538d 271 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 16 271 9.5E-99 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS05160 6cc72d6994dc768f51f47c92e43c538d 271 Gene3D G3DSA:3.20.20.60 11 271 2.8E-114 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS05160 6cc72d6994dc768f51f47c92e43c538d 271 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 12 271 42.799 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS05160 6cc72d6994dc768f51f47c92e43c538d 271 PANTHER PTHR20881 6 271 6.7E-145 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS05160 6cc72d6994dc768f51f47c92e43c538d 271 PIRSF PIRSF000388 3 271 2.3E-101 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS05160 6cc72d6994dc768f51f47c92e43c538d 271 Pfam PF02548 Ketopantoate hydroxymethyltransferase 12 266 1.4E-110 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 JE55_RS05160 6cc72d6994dc768f51f47c92e43c538d 271 SUPERFAMILY SSF51621 12 271 1.41E-105 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS06900 ca2c84992fa5006e4edc4c26198067ac 173 Pfam PF04386 Stringent starvation protein B 5 173 9.6E-40 T 22-04-2016 IPR007481 Stringent starvation protein B JE55_RS06900 ca2c84992fa5006e4edc4c26198067ac 173 PANTHER PTHR37486:SF1 1 173 5.4E-48 T 22-04-2016 JE55_RS06900 ca2c84992fa5006e4edc4c26198067ac 173 PANTHER PTHR37486 1 173 5.4E-48 T 22-04-2016 JE55_RS06900 ca2c84992fa5006e4edc4c26198067ac 173 SUPERFAMILY SSF101738 2 110 4.58E-46 T 22-04-2016 IPR007481 Stringent starvation protein B JE55_RS06900 ca2c84992fa5006e4edc4c26198067ac 173 Gene3D G3DSA:2.30.30.220 2 106 4.4E-49 T 22-04-2016 IPR007481 Stringent starvation protein B JE55_RS06900 ca2c84992fa5006e4edc4c26198067ac 173 PIRSF PIRSF005276 1 173 2.4E-51 T 22-04-2016 IPR007481 Stringent starvation protein B JE55_RS18215 238379aa7cb03a9b0c24baeddf0d3922 478 PANTHER PTHR11699:SF212 5 472 5.2E-222 T 22-04-2016 JE55_RS18215 238379aa7cb03a9b0c24baeddf0d3922 478 Gene3D G3DSA:3.40.309.10 259 445 2.1E-61 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS18215 238379aa7cb03a9b0c24baeddf0d3922 478 SUPERFAMILY SSF53720 5 471 2.75E-156 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS18215 238379aa7cb03a9b0c24baeddf0d3922 478 Gene3D G3DSA:3.40.605.10 6 258 7.8E-87 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS18215 238379aa7cb03a9b0c24baeddf0d3922 478 PANTHER PTHR11699 5 472 5.2E-222 T 22-04-2016 JE55_RS18215 238379aa7cb03a9b0c24baeddf0d3922 478 Pfam PF00171 Aldehyde dehydrogenase family 13 469 1.8E-161 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS18215 238379aa7cb03a9b0c24baeddf0d3922 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 JE55_RS27170 e3cf67b7ace220ed133b29e50ee05da7 122 PANTHER PTHR11119 1 122 7.5E-61 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS27170 e3cf67b7ace220ed133b29e50ee05da7 122 PANTHER PTHR11119:SF49 1 122 7.5E-61 T 22-04-2016 JE55_RS27170 e3cf67b7ace220ed133b29e50ee05da7 122 Pfam PF00860 Permease family 6 121 2.5E-34 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS18480 eccf44624228cefe034dd21bb7f1bf01 366 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 233 348 6.3E-10 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS06545 5f8a2e69592c76a23396a9c087698220 326 SUPERFAMILY SSF51695 39 310 2.88E-48 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 JE55_RS06545 5f8a2e69592c76a23396a9c087698220 326 PANTHER PTHR23344:SF2 31 316 1.8E-92 T 22-04-2016 JE55_RS06545 5f8a2e69592c76a23396a9c087698220 326 Gene3D G3DSA:3.20.20.190 33 313 8.6E-50 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 JE55_RS06545 5f8a2e69592c76a23396a9c087698220 326 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 44 191 1.6E-14 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 JE55_RS06545 5f8a2e69592c76a23396a9c087698220 326 PANTHER PTHR23344 31 316 1.8E-92 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 SUPERFAMILY SSF46626 227 339 5.75E-21 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 PIRSF PIRSF000018 53 476 7.2E-142 T 22-04-2016 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit GO:0005506|GO:0016020|GO:0016614|GO:0020037 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 PANTHER PTHR35008 68 471 3.6E-121 T 22-04-2016 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 Gene3D G3DSA:1.10.760.10 227 339 1.4E-12 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 Gene3D G3DSA:1.10.760.10 81 182 8.8E-16 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 Gene3D G3DSA:1.10.760.10 371 473 2.3E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 369 451 9.9E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 PANTHER PTHR35008:SF3 68 471 3.6E-121 T 22-04-2016 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 Pfam PF00034 Cytochrome c 84 182 2.2E-5 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 Pfam PF00034 Cytochrome c 240 339 1.1E-4 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 SUPERFAMILY SSF46626 371 475 2.95E-20 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS12010 739e4ec3e35e71a297c96c9eb7d84697 476 SUPERFAMILY SSF46626 75 208 1.55E-22 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS04375 97b826125547867dff1dbf0eed170c8a 276 PANTHER PTHR22916 81 156 5.7E-48 T 22-04-2016 JE55_RS04375 97b826125547867dff1dbf0eed170c8a 276 PANTHER PTHR22916 181 274 5.7E-48 T 22-04-2016 JE55_RS04375 97b826125547867dff1dbf0eed170c8a 276 Pfam PF13641 Glycosyltransferase like family 2 7 246 1.2E-14 T 22-04-2016 JE55_RS04375 97b826125547867dff1dbf0eed170c8a 276 PANTHER PTHR22916:SF16 81 156 5.7E-48 T 22-04-2016 JE55_RS04375 97b826125547867dff1dbf0eed170c8a 276 SUPERFAMILY SSF53448 5 275 1.07E-38 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04375 97b826125547867dff1dbf0eed170c8a 276 PANTHER PTHR22916:SF16 181 274 5.7E-48 T 22-04-2016 JE55_RS04375 97b826125547867dff1dbf0eed170c8a 276 Gene3D G3DSA:3.90.550.10 8 267 8.6E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS16540 7cf412244b7840c1e77126764c9addf7 570 PANTHER PTHR32089:SF63 213 562 7.3E-124 T 22-04-2016 JE55_RS16540 7cf412244b7840c1e77126764c9addf7 570 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 372 558 6.0E-54 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS16540 7cf412244b7840c1e77126764c9addf7 570 Gene3D G3DSA:1.10.287.950 328 531 4.5E-57 T 22-04-2016 JE55_RS16540 7cf412244b7840c1e77126764c9addf7 570 PANTHER PTHR32089 213 562 7.3E-124 T 22-04-2016 JE55_RS16540 7cf412244b7840c1e77126764c9addf7 570 Pfam PF00672 HAMP domain 236 307 2.8E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS16540 7cf412244b7840c1e77126764c9addf7 570 SMART SM00304 254 311 4.4E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 JE55_RS16540 7cf412244b7840c1e77126764c9addf7 570 SUPERFAMILY SSF58104 282 560 8.76E-69 T 22-04-2016 JE55_RS16540 7cf412244b7840c1e77126764c9addf7 570 SMART SM00283 312 559 1.2E-78 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 JE55_RS17135 0fd12ad2f7c35e9391cceea56c431203 353 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 52 332 9.0E-120 T 22-04-2016 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 JE55_RS17135 0fd12ad2f7c35e9391cceea56c431203 353 Pfam PF03824 High-affinity nickel-transport protein 49 337 6.6E-90 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 JE55_RS17135 0fd12ad2f7c35e9391cceea56c431203 353 PANTHER PTHR31611 1 348 1.4E-107 T 22-04-2016 JE55_RS01180 2a699d79099c6ec2a12a3f77dc2ebbc8 186 Gene3D G3DSA:1.10.132.20 68 186 1.0E-45 T 22-04-2016 IPR023584 Ribosome recycling factor domain JE55_RS01180 2a699d79099c6ec2a12a3f77dc2ebbc8 186 Hamap MF_00040 Ribosome-recycling factor [frr]. 4 186 27.379 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 JE55_RS01180 2a699d79099c6ec2a12a3f77dc2ebbc8 186 Pfam PF01765 Ribosome recycling factor 21 184 2.5E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain JE55_RS01180 2a699d79099c6ec2a12a3f77dc2ebbc8 186 SUPERFAMILY SSF55194 5 185 2.75E-70 T 22-04-2016 IPR023584 Ribosome recycling factor domain JE55_RS01180 2a699d79099c6ec2a12a3f77dc2ebbc8 186 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 186 2.6E-69 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 JE55_RS01180 2a699d79099c6ec2a12a3f77dc2ebbc8 186 PANTHER PTHR20982 6 186 1.7E-77 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 JE55_RS08970 61549ed952c3f5652f3fd860a389eab8 175 Pfam PF01292 Prokaryotic cytochrome b561 6 174 5.3E-26 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JE55_RS08970 61549ed952c3f5652f3fd860a389eab8 175 SUPERFAMILY SSF81342 4 173 5.95E-32 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 JE55_RS08970 61549ed952c3f5652f3fd860a389eab8 175 PANTHER PTHR30529 1 172 4.8E-51 T 22-04-2016 JE55_RS08970 61549ed952c3f5652f3fd860a389eab8 175 PANTHER PTHR30529:SF1 1 172 4.8E-51 T 22-04-2016 JE55_RS03195 ff1e52fc438d87b93c3a09a8e954e64e 59 SUPERFAMILY SSF57829 2 55 5.07E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 JE55_RS03195 ff1e52fc438d87b93c3a09a8e954e64e 59 PANTHER PTHR35534 1 59 2.1E-24 T 22-04-2016 JE55_RS03195 ff1e52fc438d87b93c3a09a8e954e64e 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.24 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 JE55_RS03195 ff1e52fc438d87b93c3a09a8e954e64e 59 Pfam PF01783 Ribosomal L32p protein family 2 55 3.0E-18 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 JE55_RS03195 ff1e52fc438d87b93c3a09a8e954e64e 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 3.9E-20 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 JE55_RS09985 2243da896db402b1f3b45bedbe8ce863 113 Pfam PF11604 Copper binding periplasmic protein CusF 47 113 8.7E-22 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF JE55_RS10780 122be2cd43dce407e60175012491770b 213 Gene3D G3DSA:3.40.30.10 66 208 9.3E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS10780 122be2cd43dce407e60175012491770b 213 SUPERFAMILY SSF52833 70 208 8.05E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS02435 38c86233f16ac82ace5f4cc6eea93fad 407 SUPERFAMILY SSF51338 363 399 1.81E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS02435 38c86233f16ac82ace5f4cc6eea93fad 407 SUPERFAMILY SSF51338 4 62 1.81E-20 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS02435 38c86233f16ac82ace5f4cc6eea93fad 407 TIGRFAM TIGR01224 hutI: imidazolonepropionase 22 398 6.9E-141 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 JE55_RS02435 38c86233f16ac82ace5f4cc6eea93fad 407 PANTHER PTHR22642 21 407 3.8E-149 T 22-04-2016 JE55_RS02435 38c86233f16ac82ace5f4cc6eea93fad 407 PANTHER PTHR22642:SF1 21 407 3.8E-149 T 22-04-2016 JE55_RS02435 38c86233f16ac82ace5f4cc6eea93fad 407 SUPERFAMILY SSF51556 62 362 5.24E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase JE55_RS02435 38c86233f16ac82ace5f4cc6eea93fad 407 Gene3D G3DSA:3.20.20.140 73 377 9.6E-44 T 22-04-2016 JE55_RS02435 38c86233f16ac82ace5f4cc6eea93fad 407 Gene3D G3DSA:2.30.40.10 17 72 2.0E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 JE55_RS02435 38c86233f16ac82ace5f4cc6eea93fad 407 Hamap MF_00372 Imidazolonepropionase [hutI]. 3 401 41.467 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 JE55_RS02435 38c86233f16ac82ace5f4cc6eea93fad 407 Pfam PF01979 Amidohydrolase family 59 398 2.1E-18 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 JE55_RS13260 d6cbaa4d90934245c56dc54d29a7a42b 605 Gene3D G3DSA:2.40.160.50 459 594 5.7E-10 T 22-04-2016 JE55_RS13260 d6cbaa4d90934245c56dc54d29a7a42b 605 PANTHER PTHR12815:SF12 76 593 1.8E-58 T 22-04-2016 JE55_RS13260 d6cbaa4d90934245c56dc54d29a7a42b 605 PANTHER PTHR12815 76 593 1.8E-58 T 22-04-2016 JE55_RS13260 d6cbaa4d90934245c56dc54d29a7a42b 605 Pfam PF01103 Surface antigen 345 593 8.4E-30 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 JE55_RS00810 e9c3cde9066363a7892eef50a52a1adc 168 Pfam PF13503 Domain of unknown function (DUF4123) 24 145 8.7E-22 T 22-04-2016 IPR025391 Domain of unknown function DUF4123 JE55_RS12455 abaf465dceafee6b538dff99bb16c3c1 232 Gene3D G3DSA:3.40.50.1000 90 222 3.1E-41 T 22-04-2016 IPR023214 HAD-like domain JE55_RS12455 abaf465dceafee6b538dff99bb16c3c1 232 Gene3D G3DSA:3.40.50.1000 8 23 3.1E-41 T 22-04-2016 IPR023214 HAD-like domain JE55_RS12455 abaf465dceafee6b538dff99bb16c3c1 232 SUPERFAMILY SSF56784 9 222 1.15E-47 T 22-04-2016 IPR023214 HAD-like domain JE55_RS12455 abaf465dceafee6b538dff99bb16c3c1 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 186 4.6E-20 T 22-04-2016 IPR023214 HAD-like domain JE55_RS12455 abaf465dceafee6b538dff99bb16c3c1 232 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 186 5.3E-16 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS12455 abaf465dceafee6b538dff99bb16c3c1 232 PANTHER PTHR18901 1 217 2.9E-43 T 22-04-2016 JE55_RS12455 abaf465dceafee6b538dff99bb16c3c1 232 PANTHER PTHR18901:SF9 1 217 2.9E-43 T 22-04-2016 JE55_RS11495 b927fbbe7cc2ba8ab0e2be2cf4bedd4e 531 Pfam PF07690 Major Facilitator Superfamily 28 421 5.8E-51 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS11495 b927fbbe7cc2ba8ab0e2be2cf4bedd4e 531 PANTHER PTHR23501 13 531 9.3E-115 T 22-04-2016 JE55_RS11495 b927fbbe7cc2ba8ab0e2be2cf4bedd4e 531 Gene3D G3DSA:1.20.1250.20 493 519 4.4E-19 T 22-04-2016 JE55_RS11495 b927fbbe7cc2ba8ab0e2be2cf4bedd4e 531 Gene3D G3DSA:1.20.1250.20 275 432 4.4E-19 T 22-04-2016 JE55_RS11495 b927fbbe7cc2ba8ab0e2be2cf4bedd4e 531 Gene3D G3DSA:1.20.1250.20 25 207 2.9E-31 T 22-04-2016 JE55_RS11495 b927fbbe7cc2ba8ab0e2be2cf4bedd4e 531 SUPERFAMILY SSF103473 24 213 1.7E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS11495 b927fbbe7cc2ba8ab0e2be2cf4bedd4e 531 SUPERFAMILY SSF103473 491 515 1.7E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS11495 b927fbbe7cc2ba8ab0e2be2cf4bedd4e 531 SUPERFAMILY SSF103473 260 431 1.7E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS31870 9e03edd235353174ab17bba7281201d4 389 PANTHER PTHR23508:SF17 1 389 4.1E-215 T 22-04-2016 JE55_RS31870 9e03edd235353174ab17bba7281201d4 389 ProSitePatterns PS00217 Sugar transport proteins signature 2. 87 112 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS31870 9e03edd235353174ab17bba7281201d4 389 Gene3D G3DSA:1.20.1250.20 23 185 5.0E-25 T 22-04-2016 JE55_RS31870 9e03edd235353174ab17bba7281201d4 389 Gene3D G3DSA:1.20.1250.20 205 388 1.3E-23 T 22-04-2016 JE55_RS31870 9e03edd235353174ab17bba7281201d4 389 ProSitePatterns PS00216 Sugar transport proteins signature 1. 262 278 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS31870 9e03edd235353174ab17bba7281201d4 389 PANTHER PTHR23508 1 389 4.1E-215 T 22-04-2016 JE55_RS31870 9e03edd235353174ab17bba7281201d4 389 SUPERFAMILY SSF103473 7 386 5.49E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS31870 9e03edd235353174ab17bba7281201d4 389 Pfam PF07690 Major Facilitator Superfamily 22 349 5.6E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 Gene3D G3DSA:1.20.200.10 112 378 8.4E-87 T 22-04-2016 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PANTHER PTHR11444 1 459 9.4E-180 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 Pfam PF14698 Argininosuccinate lyase C-terminal 370 427 2.1E-16 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 Hamap MF_00006 Argininosuccinate lyase [argH]. 7 457 37.061 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 Gene3D G3DSA:1.10.275.10 8 111 3.4E-31 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 Gene3D G3DSA:1.10.40.30 379 432 5.3E-21 T 22-04-2016 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 TIGRFAM TIGR00838 argH: argininosuccinate lyase 9 459 1.6E-150 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 Pfam PF00206 Lyase 11 305 1.7E-60 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PANTHER PTHR11444:SF3 1 459 9.4E-180 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PRINTS PR00145 Argininosuccinate lyase family signature 315 334 3.3E-49 T 22-04-2016 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PRINTS PR00145 Argininosuccinate lyase family signature 236 260 3.3E-49 T 22-04-2016 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PRINTS PR00145 Argininosuccinate lyase family signature 280 296 3.3E-49 T 22-04-2016 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PRINTS PR00145 Argininosuccinate lyase family signature 106 128 3.3E-49 T 22-04-2016 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PRINTS PR00145 Argininosuccinate lyase family signature 147 167 3.3E-49 T 22-04-2016 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PRINTS PR00145 Argininosuccinate lyase family signature 198 214 3.3E-49 T 22-04-2016 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 SUPERFAMILY SSF48557 11 461 2.04E-122 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PRINTS PR00149 Fumarate lyase superfamily signature 107 125 9.2E-19 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PRINTS PR00149 Fumarate lyase superfamily signature 152 170 9.2E-19 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PRINTS PR00149 Fumarate lyase superfamily signature 236 263 9.2E-19 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS17405 42ea5628d1539943cc82c8ff83de8f44 466 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 9.2E-19 T 22-04-2016 IPR000362 Fumarate lyase family JE55_RS10530 055ab08445734e08a95765cf53b5204b 254 Gene3D G3DSA:3.90.1550.10 32 235 4.9E-66 T 22-04-2016 JE55_RS10530 055ab08445734e08a95765cf53b5204b 254 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 53 233 2.3E-57 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 JE55_RS10530 055ab08445734e08a95765cf53b5204b 254 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 98 113 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 JE55_RS10530 055ab08445734e08a95765cf53b5204b 254 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 102 155 3.0E-23 T 22-04-2016 JE55_RS10530 055ab08445734e08a95765cf53b5204b 254 PANTHER PTHR10993 35 236 8.2E-64 T 22-04-2016 JE55_RS10530 055ab08445734e08a95765cf53b5204b 254 PIRSF PIRSF016262 30 248 1.9E-58 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 JE55_RS10530 055ab08445734e08a95765cf53b5204b 254 Hamap MF_00013 Octanoyltransferase [lipB]. 31 238 35.735 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 JE55_RS10530 055ab08445734e08a95765cf53b5204b 254 Pfam PF03099 Biotin/lipoate A/B protein ligase family 89 191 2.8E-6 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 JE55_RS10530 055ab08445734e08a95765cf53b5204b 254 SUPERFAMILY SSF55681 29 236 1.57E-62 T 22-04-2016 JE55_RS14245 a46698e83f9492567ac091e2e87a0ccf 464 PANTHER PTHR11895:SF66 1 463 5.9E-134 T 22-04-2016 JE55_RS14245 a46698e83f9492567ac091e2e87a0ccf 464 SUPERFAMILY SSF75304 1 460 2.22E-121 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS14245 a46698e83f9492567ac091e2e87a0ccf 464 Gene3D G3DSA:3.90.1300.10 2 455 2.4E-118 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS14245 a46698e83f9492567ac091e2e87a0ccf 464 PANTHER PTHR11895 1 463 5.9E-134 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS14245 a46698e83f9492567ac091e2e87a0ccf 464 Pfam PF01425 Amidase 28 297 4.4E-68 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS14245 a46698e83f9492567ac091e2e87a0ccf 464 Pfam PF01425 Amidase 358 443 8.6E-14 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS12640 7af8a4a63c68864aa562e72e5efcd9ec 203 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 196 20.278 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 JE55_RS12640 7af8a4a63c68864aa562e72e5efcd9ec 203 PANTHER PTHR30309 1 200 8.6E-72 T 22-04-2016 JE55_RS12640 7af8a4a63c68864aa562e72e5efcd9ec 203 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 187 8.7E-51 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 JE55_RS12640 7af8a4a63c68864aa562e72e5efcd9ec 203 SMART SM01207 8 188 1.4E-84 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 JE55_RS12640 7af8a4a63c68864aa562e72e5efcd9ec 203 PANTHER PTHR30309:SF0 1 200 8.6E-72 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 JE55_RS12640 7af8a4a63c68864aa562e72e5efcd9ec 203 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 3 198 5.0E-58 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 PANTHER PTHR26402:SF458 3 208 7.9E-57 T 22-04-2016 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 Pfam PF00072 Response regulator receiver domain 5 116 9.3E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 Gene3D G3DSA:3.40.50.2300 2 121 3.0E-37 T 22-04-2016 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 SMART SM00421 147 204 1.8E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 PANTHER PTHR26402 3 208 7.9E-57 T 22-04-2016 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.5E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.5E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.5E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 SMART SM00448 3 116 4.3E-33 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 SUPERFAMILY SSF52172 2 133 3.56E-35 T 22-04-2016 IPR011006 CheY-like superfamily JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 SUPERFAMILY SSF46894 139 212 2.86E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 3.8E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 JE55_RS09595 90d6010452c658ad99cd0ae41e48fa36 218 Gene3D G3DSA:1.10.10.10 122 212 4.3E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13105 7721df46cb613457aea25ef48b06b16a 383 PANTHER PTHR33529 1 377 8.5E-72 T 22-04-2016 JE55_RS13105 7721df46cb613457aea25ef48b06b16a 383 PANTHER PTHR33529:SF1 1 377 8.5E-72 T 22-04-2016 JE55_RS13105 7721df46cb613457aea25ef48b06b16a 383 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 377 1.5E-70 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 JE55_RS13105 7721df46cb613457aea25ef48b06b16a 383 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 379 8.1E-101 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 PANTHER PTHR11835 277 419 3.9E-233 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 PANTHER PTHR11835 3 166 3.9E-233 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 PANTHER PTHR11835 190 257 3.9E-233 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 Gene3D G3DSA:3.40.718.10 14 419 1.3E-162 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 31 412 1.4E-114 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 SUPERFAMILY SSF53659 4 418 8.64E-146 T 22-04-2016 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 SMART SM01329 30 414 8.7E-176 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 305 324 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 419 1.3E-222 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 PANTHER PTHR11835:SF52 277 419 3.9E-233 T 22-04-2016 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 PANTHER PTHR11835:SF52 3 166 3.9E-233 T 22-04-2016 JE55_RS12815 3ed942d45b7fe14e6620407a51c0996f 419 PANTHER PTHR11835:SF52 190 257 3.9E-233 T 22-04-2016 JE55_RS31205 af094a5dd7b419d9e305f91334dde59b 95 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 95 1.3E-32 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 JE55_RS31205 af094a5dd7b419d9e305f91334dde59b 95 PANTHER PTHR18968 1 95 1.3E-60 T 22-04-2016 JE55_RS31205 af094a5dd7b419d9e305f91334dde59b 95 PANTHER PTHR18968:SF116 1 95 1.3E-60 T 22-04-2016 JE55_RS31205 af094a5dd7b419d9e305f91334dde59b 95 SUPERFAMILY SSF52518 1 95 2.04E-34 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS31205 af094a5dd7b419d9e305f91334dde59b 95 Gene3D G3DSA:3.40.50.970 1 95 8.9E-42 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold JE55_RS16495 af361fb010a051659fa9741e9738308c 332 Pfam PF07608 Protein of unknown function (DUF1571) 132 332 3.4E-58 T 22-04-2016 IPR011465 Protein of unknown function DUF1571 JE55_RS20895 65075bbb4ac939ebcbaf6d3b2aa8f999 414 Pfam PF01266 FAD dependent oxidoreductase 89 414 2.7E-46 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 JE55_RS20895 65075bbb4ac939ebcbaf6d3b2aa8f999 414 PANTHER PTHR13847:SF44 46 414 1.1E-81 T 22-04-2016 JE55_RS20895 65075bbb4ac939ebcbaf6d3b2aa8f999 414 PANTHER PTHR13847 46 414 1.1E-81 T 22-04-2016 JE55_RS20895 65075bbb4ac939ebcbaf6d3b2aa8f999 414 Gene3D G3DSA:3.30.9.10 178 230 3.6E-10 T 22-04-2016 JE55_RS20895 65075bbb4ac939ebcbaf6d3b2aa8f999 414 Gene3D G3DSA:3.30.9.10 310 402 3.6E-10 T 22-04-2016 JE55_RS20895 65075bbb4ac939ebcbaf6d3b2aa8f999 414 Gene3D G3DSA:3.50.50.60 79 167 6.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS20895 65075bbb4ac939ebcbaf6d3b2aa8f999 414 Gene3D G3DSA:3.50.50.60 231 309 6.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS20895 65075bbb4ac939ebcbaf6d3b2aa8f999 414 Gene3D G3DSA:3.50.50.60 405 414 6.4E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS20895 65075bbb4ac939ebcbaf6d3b2aa8f999 414 SUPERFAMILY SSF51905 88 343 2.42E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 JE55_RS16440 ab6bc9c7f27c272fda1e40d6047e0317 412 Gene3D G3DSA:3.40.50.300 141 382 6.7E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS16440 ab6bc9c7f27c272fda1e40d6047e0317 412 Pfam PF16968 Pilus assembly protein TadZ N-terminal 16 130 2.2E-8 T 22-04-2016 IPR031580 Pilus assembly protein TadZ, N-terminal JE55_RS16440 ab6bc9c7f27c272fda1e40d6047e0317 412 PANTHER PTHR13696 81 395 9.6E-14 T 22-04-2016 JE55_RS16440 ab6bc9c7f27c272fda1e40d6047e0317 412 Gene3D G3DSA:3.40.50.2300 57 115 7.3E-4 T 22-04-2016 JE55_RS16440 ab6bc9c7f27c272fda1e40d6047e0317 412 SUPERFAMILY SSF52540 143 382 4.5E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS26025 1525c84567d5cce5db92bf9905fd4afa 88 Pfam PF08521 Two-component sensor kinase N-terminal 4 86 1.6E-14 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal JE55_RS02055 38ee75399b8ac4b6ff8ed19eecfe0728 174 SUPERFAMILY SSF51161 6 170 7.76E-47 T 22-04-2016 IPR011004 Trimeric LpxA-like JE55_RS02055 38ee75399b8ac4b6ff8ed19eecfe0728 174 Gene3D G3DSA:2.160.10.10 4 163 5.5E-45 T 22-04-2016 JE55_RS02055 38ee75399b8ac4b6ff8ed19eecfe0728 174 PANTHER PTHR13061 2 159 6.2E-64 T 22-04-2016 JE55_RS02055 38ee75399b8ac4b6ff8ed19eecfe0728 174 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 5.7E-10 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS06060 17fd90cff7f3af48ade16d579d5b312b 106 Gene3D G3DSA:2.30.170.10 67 102 5.1E-4 T 22-04-2016 JE55_RS08275 2a4915a2921c39c4dd4f44dba477a71f 267 PIRSF PIRSF018982 1 254 6.9E-98 T 22-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 JE55_RS08275 2a4915a2921c39c4dd4f44dba477a71f 267 PANTHER PTHR39330 1 260 3.6E-89 T 22-04-2016 JE55_RS08275 2a4915a2921c39c4dd4f44dba477a71f 267 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 8 243 2.0E-91 T 22-04-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7|UniPathway: UPA00560 JE55_RS06785 1f354755cc8024b0795604113aa5af01 223 SUPERFAMILY SSF48452 41 112 3.54E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS06785 1f354755cc8024b0795604113aa5af01 223 Gene3D G3DSA:1.25.40.10 40 111 7.5E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS06785 1f354755cc8024b0795604113aa5af01 223 Pfam PF14559 Tetratricopeptide repeat 48 109 6.0E-6 T 22-04-2016 JE55_RS03270 bdfc2d1b45bfcd017ca56e70bae85331 329 PANTHER PTHR10996 1 329 8.0E-117 T 22-04-2016 JE55_RS03270 bdfc2d1b45bfcd017ca56e70bae85331 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 316 9.1E-22 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 JE55_RS03270 bdfc2d1b45bfcd017ca56e70bae85331 329 Gene3D G3DSA:3.40.50.720 113 286 4.0E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS03270 bdfc2d1b45bfcd017ca56e70bae85331 329 Gene3D G3DSA:3.40.50.720 2 112 4.3E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS03270 bdfc2d1b45bfcd017ca56e70bae85331 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 284 2.4E-59 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 JE55_RS03270 bdfc2d1b45bfcd017ca56e70bae85331 329 SUPERFAMILY SSF52283 1 133 1.53E-31 T 22-04-2016 JE55_RS03270 bdfc2d1b45bfcd017ca56e70bae85331 329 PANTHER PTHR10996:SF118 1 329 8.0E-117 T 22-04-2016 JE55_RS03270 bdfc2d1b45bfcd017ca56e70bae85331 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JE55_RS03270 bdfc2d1b45bfcd017ca56e70bae85331 329 SUPERFAMILY SSF51735 98 285 3.73E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10105 7f5f66fdbf58e7147ff252c77fd63b44 110 Pfam PF06945 Protein of unknown function (DUF1289) 61 108 2.6E-19 T 22-04-2016 IPR010710 Protein of unknown function DUF1289 JE55_RS10105 7f5f66fdbf58e7147ff252c77fd63b44 110 PANTHER PTHR35175 56 110 6.7E-13 T 22-04-2016 JE55_RS29355 c7f5a8ad82cdedeb55197a1d17164de6 292 PANTHER PTHR23046 200 292 2.7E-49 T 22-04-2016 JE55_RS29355 c7f5a8ad82cdedeb55197a1d17164de6 292 SMART SM01001 200 292 2.0E-41 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 JE55_RS29355 c7f5a8ad82cdedeb55197a1d17164de6 292 Pfam PF00731 AIR carboxylase 202 292 1.8E-39 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 JE55_RS29355 c7f5a8ad82cdedeb55197a1d17164de6 292 SUPERFAMILY SSF52255 200 292 3.79E-39 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 JE55_RS29355 c7f5a8ad82cdedeb55197a1d17164de6 292 PANTHER PTHR23046:SF2 200 292 2.7E-49 T 22-04-2016 JE55_RS29355 c7f5a8ad82cdedeb55197a1d17164de6 292 Gene3D G3DSA:3.40.50.7700 192 292 2.4E-45 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 JE55_RS16230 c369a410714f1837ea1ddac42cd1ef87 394 Pfam PF01757 Acyltransferase family 14 342 7.0E-20 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 JE55_RS16230 c369a410714f1837ea1ddac42cd1ef87 394 PANTHER PTHR23028 14 390 5.2E-50 T 22-04-2016 JE55_RS16230 c369a410714f1837ea1ddac42cd1ef87 394 PANTHER PTHR23028:SF69 14 390 5.2E-50 T 22-04-2016 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 SUPERFAMILY SSF53335 91 144 2.57E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 SUPERFAMILY SSF53335 401 487 2.57E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 SUPERFAMILY SSF53335 174 272 2.57E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 Pfam PF01555 DNA methylase 124 463 3.7E-31 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 445 459 1.1E-11 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 186 205 1.1E-11 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 422 444 1.1E-11 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 124 136 1.1E-11 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 Gene3D G3DSA:3.40.50.150 373 516 4.1E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 Gene3D G3DSA:3.40.50.150 100 271 4.1E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 PANTHER PTHR13370:SF7 101 133 3.4E-15 T 22-04-2016 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 PANTHER PTHR13370:SF7 396 463 3.4E-15 T 22-04-2016 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 PANTHER PTHR13370:SF7 164 313 3.4E-15 T 22-04-2016 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 PIRSF PIRSF015855 4 671 1.9E-193 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 127 133 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 PANTHER PTHR13370 101 133 3.4E-15 T 22-04-2016 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 PANTHER PTHR13370 396 463 3.4E-15 T 22-04-2016 JE55_RS08815 c244c0206550dce2265729f7a97043a2 671 PANTHER PTHR13370 164 313 3.4E-15 T 22-04-2016 JE55_RS14135 6ef29c185710e686ce6abe427a16150c 250 PANTHER PTHR12039 29 248 1.3E-32 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 JE55_RS14135 6ef29c185710e686ce6abe427a16150c 250 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 33 248 4.1E-35 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 JE55_RS14135 6ef29c185710e686ce6abe427a16150c 250 SUPERFAMILY SSF52374 29 248 3.94E-41 T 22-04-2016 JE55_RS14135 6ef29c185710e686ce6abe427a16150c 250 Gene3D G3DSA:3.40.50.620 29 249 2.7E-60 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS14135 6ef29c185710e686ce6abe427a16150c 250 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 29 249 26.285 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 JE55_RS14135 6ef29c185710e686ce6abe427a16150c 250 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 31 90 1.7E-9 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JE55_RS14135 6ef29c185710e686ce6abe427a16150c 250 Pfam PF01467 Cytidylyltransferase-like 33 214 2.9E-21 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JE55_RS06815 afb6dc3128f9b180ead537c92bc536b4 137 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 9 128 3.3E-40 T 22-04-2016 IPR006521 Tail protein I JE55_RS06815 afb6dc3128f9b180ead537c92bc536b4 137 Pfam PF09684 Phage tail protein (Tail_P2_I) 9 129 1.7E-41 T 22-04-2016 IPR006521 Tail protein I JE55_RS05055 9deca8b6f513bfd4a662dcb60b0c87a2 440 PANTHER PTHR32301 24 128 2.1E-19 T 22-04-2016 JE55_RS05055 9deca8b6f513bfd4a662dcb60b0c87a2 440 PANTHER PTHR32301 151 323 2.1E-19 T 22-04-2016 JE55_RS05055 9deca8b6f513bfd4a662dcb60b0c87a2 440 SUPERFAMILY SSF52540 15 111 1.84E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05055 9deca8b6f513bfd4a662dcb60b0c87a2 440 Gene3D G3DSA:3.40.50.300 13 121 5.2E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS05055 9deca8b6f513bfd4a662dcb60b0c87a2 440 Pfam PF03567 Sulfotransferase family 23 262 2.8E-12 T 22-04-2016 IPR005331 Sulfotransferase GO:0008146|GO:0016021 JE55_RS26315 e2da15cbd624aa2c8ac850e0e4de7531 400 Pfam PF08006 Protein of unknown function (DUF1700) 128 252 3.4E-21 T 22-04-2016 IPR012963 Protein of unknown function DUF1700 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 2 294 60.234 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 134 154 1.2E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 1.2E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 108 132 1.2E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 157 172 1.2E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 77 97 1.2E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 56 71 1.2E-68 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 Gene3D G3DSA:1.20.58.180 218 299 8.2E-38 T 22-04-2016 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 293 7.4E-148 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 SUPERFAMILY SSF55681 3 293 4.36E-129 T 22-04-2016 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 Gene3D G3DSA:3.30.930.10 1 216 3.1E-104 T 22-04-2016 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 PANTHER PTHR30075 2 299 3.7E-234 T 22-04-2016 JE55_RS11720 ebd373151b09c1c7fdbc13bb718e241b 300 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 3 299 1.5E-155 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS05325 d4bcba9c2186d6b90889598b18ff26b6 209 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 16 204 5.1E-62 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 JE55_RS05325 d4bcba9c2186d6b90889598b18ff26b6 209 SUPERFAMILY SSF159709 24 208 3.4E-52 T 22-04-2016 JE55_RS05325 d4bcba9c2186d6b90889598b18ff26b6 209 PIRSF PIRSF020680 7 209 7.4E-67 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 JE55_RS05325 d4bcba9c2186d6b90889598b18ff26b6 209 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 15 207 2.8E-62 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 JE55_RS16905 514c707fec5cad54daa27c8bdbadc61f 343 Pfam PF09977 Putative Tad-like Flp pilus-assembly 58 163 4.4E-12 T 22-04-2016 IPR018705 Domain of unknown function DUF2134, membrane JE55_RS16905 514c707fec5cad54daa27c8bdbadc61f 343 Pfam PF07811 TadE-like protein 15 56 1.3E-5 T 22-04-2016 IPR012495 TadE-like JE55_RS10790 271a5157a44ae62d37352db1f96ede0e 300 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 12 293 19.213 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 JE55_RS10790 271a5157a44ae62d37352db1f96ede0e 300 Pfam PF01040 UbiA prenyltransferase family 28 274 1.4E-60 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 JE55_RS10790 271a5157a44ae62d37352db1f96ede0e 300 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site JE55_RS10790 271a5157a44ae62d37352db1f96ede0e 300 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 15 292 3.1E-94 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 JE55_RS10790 271a5157a44ae62d37352db1f96ede0e 300 PANTHER PTHR11048 13 295 1.3E-77 T 22-04-2016 JE55_RS02650 efce28838d91e22b2d3eabb6a8c99a13 424 PANTHER PTHR19353:SF24 74 360 2.9E-26 T 22-04-2016 JE55_RS02650 efce28838d91e22b2d3eabb6a8c99a13 424 PANTHER PTHR19353 74 360 2.9E-26 T 22-04-2016 JE55_RS02650 efce28838d91e22b2d3eabb6a8c99a13 424 Pfam PF00487 Fatty acid desaturase 109 367 2.1E-26 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 JE55_RS07330 9ec0259da024cfee18689bb396d8b6e5 102 ProSitePatterns PS01108 Ribosomal protein L24 signature. 7 24 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07330 9ec0259da024cfee18689bb396d8b6e5 102 PANTHER PTHR12903 3 100 3.7E-38 T 22-04-2016 JE55_RS07330 9ec0259da024cfee18689bb396d8b6e5 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 37 99 2.0E-22 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07330 9ec0259da024cfee18689bb396d8b6e5 102 SUPERFAMILY SSF50104 3 98 9.03E-29 T 22-04-2016 IPR008991 Translation protein SH3-like domain JE55_RS07330 9ec0259da024cfee18689bb396d8b6e5 102 Gene3D G3DSA:2.30.30.30 3 89 2.9E-20 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 JE55_RS07330 9ec0259da024cfee18689bb396d8b6e5 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 94 19.588 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07330 9ec0259da024cfee18689bb396d8b6e5 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 99 4.8E-32 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS04910 cbe9e64af8384653a4a2a70f1abd5413 314 SUPERFAMILY SSF53756 47 254 4.14E-10 T 22-04-2016 JE55_RS04910 cbe9e64af8384653a4a2a70f1abd5413 314 Pfam PF13692 Glycosyl transferases group 1 140 252 2.3E-7 T 22-04-2016 JE55_RS00685 99f694dc523ade08bf8172c1e89547b8 224 PANTHER PTHR30383:SF5 42 216 4.4E-44 T 22-04-2016 JE55_RS00685 99f694dc523ade08bf8172c1e89547b8 224 SUPERFAMILY SSF52266 40 219 9.44E-50 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS00685 99f694dc523ade08bf8172c1e89547b8 224 PANTHER PTHR30383 42 216 4.4E-44 T 22-04-2016 JE55_RS00685 99f694dc523ade08bf8172c1e89547b8 224 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 44 205 1.6E-26 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS00685 99f694dc523ade08bf8172c1e89547b8 224 Gene3D G3DSA:3.40.50.1110 39 220 1.1E-55 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS00650 3ee1a525a9fd8f5584a9917c89ae7bc8 177 PANTHER PTHR23091 2 156 1.3E-27 T 22-04-2016 JE55_RS00650 3ee1a525a9fd8f5584a9917c89ae7bc8 177 Pfam PF13527 Acetyltransferase (GNAT) domain 19 139 6.2E-10 T 22-04-2016 JE55_RS00650 3ee1a525a9fd8f5584a9917c89ae7bc8 177 Gene3D G3DSA:3.40.630.30 12 145 1.0E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS00650 3ee1a525a9fd8f5584a9917c89ae7bc8 177 PANTHER PTHR23091:SF237 2 156 1.3E-27 T 22-04-2016 JE55_RS00650 3ee1a525a9fd8f5584a9917c89ae7bc8 177 SUPERFAMILY SSF55729 13 160 7.8E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS01820 6135eadd4707665223ec4459f4fec465 389 PANTHER PTHR35861 8 389 3.0E-102 T 22-04-2016 JE55_RS01820 6135eadd4707665223ec4459f4fec465 389 Pfam PF04984 Phage tail sheath protein 96 377 6.0E-52 T 22-04-2016 IPR007067 Tail sheath protein JE55_RS01820 6135eadd4707665223ec4459f4fec465 389 Pfam PF04984 Phage tail sheath protein 4 96 2.2E-9 T 22-04-2016 IPR007067 Tail sheath protein JE55_RS01820 6135eadd4707665223ec4459f4fec465 389 PANTHER PTHR35861:SF1 8 389 3.0E-102 T 22-04-2016 JE55_RS09805 1691a671c1b2759823f239df2d31e788 252 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 16 250 30.504 T 22-04-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 JE55_RS09805 1691a671c1b2759823f239df2d31e788 252 Pfam PF07238 PilZ domain 127 241 1.6E-10 T 22-04-2016 IPR009875 PilZ domain GO:0035438 JE55_RS09805 1691a671c1b2759823f239df2d31e788 252 Pfam PF07317 Flagellar regulator YcgR 21 124 5.2E-29 T 22-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal JE55_RS09805 1691a671c1b2759823f239df2d31e788 252 Gene3D G3DSA:2.40.10.220 128 250 7.8E-20 T 22-04-2016 JE55_RS09805 1691a671c1b2759823f239df2d31e788 252 Gene3D G3DSA:2.30.110.10 24 127 2.0E-9 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS00300 1f92409070c0e402d35ee0760322b4a8 140 Pfam PF06078 Bacterial protein of unknown function (DUF937) 2 109 1.7E-11 T 22-04-2016 IPR009282 Protein of unknown function DUF937 JE55_RS00300 1f92409070c0e402d35ee0760322b4a8 140 Gene3D G3DSA:1.10.10.690 1 129 2.0E-40 T 22-04-2016 IPR027405 YidB-like JE55_RS00300 1f92409070c0e402d35ee0760322b4a8 140 SUPERFAMILY SSF140804 7 126 1.83E-36 T 22-04-2016 IPR027405 YidB-like JE55_RS07690 cb772b9691142bd78f1e898fe5b2c69c 395 SMART SM00974 280 374 4.9E-17 T 22-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding JE55_RS07690 cb772b9691142bd78f1e898fe5b2c69c 395 Pfam PF10544 T5orf172 domain 264 374 2.0E-11 T 22-04-2016 IPR018306 Bacteriophage T5, Orf172 DNA-binding JE55_RS00505 d340e6a54d47e0fed23c8c2379f86485 195 Pfam PF04366 Las17-binding protein actin regulator 108 192 2.0E-12 T 22-04-2016 IPR007461 Ysc84 actin-binding domain JE55_RS17050 052e4b042703023247692e6234391ed8 296 SMART SM00382 33 222 2.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS17050 052e4b042703023247692e6234391ed8 296 Gene3D G3DSA:3.40.50.300 7 239 1.8E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17050 052e4b042703023247692e6234391ed8 296 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS17050 052e4b042703023247692e6234391ed8 296 PANTHER PTHR24220 10 261 3.6E-108 T 22-04-2016 JE55_RS17050 052e4b042703023247692e6234391ed8 296 SUPERFAMILY SSF52540 9 235 2.66E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17050 052e4b042703023247692e6234391ed8 296 PANTHER PTHR24220:SF266 10 261 3.6E-108 T 22-04-2016 JE55_RS17050 052e4b042703023247692e6234391ed8 296 Pfam PF00005 ABC transporter 24 172 4.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS01530 5ebc8e286b4ad0f47ff78e3ac204005d 399 PANTHER PTHR20861:SF5 176 364 2.0E-21 T 22-04-2016 JE55_RS01530 5ebc8e286b4ad0f47ff78e3ac204005d 399 Gene3D G3DSA:3.30.230.10 170 251 1.9E-9 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS01530 5ebc8e286b4ad0f47ff78e3ac204005d 399 Pfam PF00288 GHMP kinases N terminal domain 195 253 7.0E-8 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 JE55_RS01530 5ebc8e286b4ad0f47ff78e3ac204005d 399 SUPERFAMILY SSF54211 119 273 5.46E-19 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS01530 5ebc8e286b4ad0f47ff78e3ac204005d 399 PANTHER PTHR20861 176 364 2.0E-21 T 22-04-2016 JE55_RS16050 ae7a90b405c4faf71e1f4d19a34d7d1b 473 Gene3D G3DSA:3.30.465.10 99 220 2.1E-36 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 JE55_RS16050 ae7a90b405c4faf71e1f4d19a34d7d1b 473 Pfam PF02913 FAD linked oxidases, C-terminal domain 220 471 1.3E-49 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 JE55_RS16050 ae7a90b405c4faf71e1f4d19a34d7d1b 473 Gene3D G3DSA:3.30.43.10 3 98 3.7E-26 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 JE55_RS16050 ae7a90b405c4faf71e1f4d19a34d7d1b 473 Pfam PF01565 FAD binding domain 44 180 1.5E-33 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 JE55_RS16050 ae7a90b405c4faf71e1f4d19a34d7d1b 473 SUPERFAMILY SSF56176 5 220 3.27E-75 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 JE55_RS16050 ae7a90b405c4faf71e1f4d19a34d7d1b 473 PANTHER PTHR11748:SF76 16 472 2.4E-183 T 22-04-2016 JE55_RS16050 ae7a90b405c4faf71e1f4d19a34d7d1b 473 PANTHER PTHR11748 16 472 2.4E-183 T 22-04-2016 JE55_RS16050 ae7a90b405c4faf71e1f4d19a34d7d1b 473 SUPERFAMILY SSF55103 197 471 4.25E-55 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 JE55_RS16050 ae7a90b405c4faf71e1f4d19a34d7d1b 473 Gene3D G3DSA:1.10.45.10 432 471 3.1E-12 T 22-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 JE55_RS13160 b0c8f6b31d81289b049019c6026b1605 104 PANTHER PTHR34981 2 99 1.3E-16 T 22-04-2016 JE55_RS13160 b0c8f6b31d81289b049019c6026b1605 104 PANTHER PTHR34981:SF1 2 99 1.3E-16 T 22-04-2016 JE55_RS13160 b0c8f6b31d81289b049019c6026b1605 104 Gene3D G3DSA:1.20.120.420 31 80 9.2E-4 T 22-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 JE55_RS13160 b0c8f6b31d81289b049019c6026b1605 104 Pfam PF05164 Cell division protein ZapA 6 94 3.3E-21 T 22-04-2016 IPR007838 Cell division protein ZapA-like JE55_RS13160 b0c8f6b31d81289b049019c6026b1605 104 SUPERFAMILY SSF102829 5 95 1.44E-21 T 22-04-2016 IPR007838 Cell division protein ZapA-like JE55_RS12695 1099172247856d22ca77ba0b29d999b1 68 Gene3D G3DSA:2.20.25.10 8 52 3.0E-27 T 22-04-2016 JE55_RS12695 1099172247856d22ca77ba0b29d999b1 68 PANTHER PTHR33505 2 53 5.5E-25 T 22-04-2016 JE55_RS12695 1099172247856d22ca77ba0b29d999b1 68 TIGRFAM TIGR01053 LSD1: zinc finger domain, LSD1 subclass 9 29 0.0015 T 22-04-2016 IPR005735 Zinc finger, LSD1-type JE55_RS12695 1099172247856d22ca77ba0b29d999b1 68 SUPERFAMILY SSF158997 2 52 9.55E-22 T 22-04-2016 JE55_RS12695 1099172247856d22ca77ba0b29d999b1 68 Pfam PF03966 Trm112p-like protein 2 41 4.1E-13 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 JE55_RS12695 1099172247856d22ca77ba0b29d999b1 68 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.853 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 JE55_RS10415 5da87b1a4766c4fa8e0782571289185c 330 PANTHER PTHR11820 8 323 8.2E-136 T 22-04-2016 JE55_RS10415 5da87b1a4766c4fa8e0782571289185c 330 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 4.0E-39 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 JE55_RS10415 5da87b1a4766c4fa8e0782571289185c 330 SUPERFAMILY SSF56529 77 325 1.57E-60 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 JE55_RS10415 5da87b1a4766c4fa8e0782571289185c 330 PANTHER PTHR11820:SF85 8 323 8.2E-136 T 22-04-2016 JE55_RS10415 5da87b1a4766c4fa8e0782571289185c 330 Gene3D G3DSA:3.90.850.10 68 307 5.7E-41 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 PRINTS PR01271 Histone deacetylase signature 69 87 4.7E-5 T 22-04-2016 IPR003084 Histone deacetylase GO:0004407|GO:0016575 JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 PRINTS PR01271 Histone deacetylase signature 36 53 4.7E-5 T 22-04-2016 IPR003084 Histone deacetylase GO:0004407|GO:0016575 JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 PRINTS PR01271 Histone deacetylase signature 235 253 4.7E-5 T 22-04-2016 IPR003084 Histone deacetylase GO:0004407|GO:0016575 JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 PRINTS PR01271 Histone deacetylase signature 218 231 4.7E-5 T 22-04-2016 IPR003084 Histone deacetylase GO:0004407|GO:0016575 JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 Pfam PF00850 Histone deacetylase domain 35 325 1.6E-84 T 22-04-2016 IPR023801 Histone deacetylase domain JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 SUPERFAMILY SSF52768 4 365 3.26E-106 T 22-04-2016 JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 PRINTS PR01270 Histone deacetylase superfamily signature 172 187 1.5E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 PRINTS PR01270 Histone deacetylase superfamily signature 257 267 1.5E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 PRINTS PR01270 Histone deacetylase superfamily signature 138 161 1.5E-15 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 PANTHER PTHR10625 4 367 7.5E-113 T 22-04-2016 IPR000286 Histone deacetylase superfamily JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 PANTHER PTHR10625:SF104 4 367 7.5E-113 T 22-04-2016 JE55_RS09145 fc3fc6750f848b4d53ce634637292adf 370 Gene3D G3DSA:3.40.800.20 4 368 4.3E-106 T 22-04-2016 IPR023801 Histone deacetylase domain JE55_RS14430 74daaf597f7a63613c1dc2c4d794bf88 354 Pfam PF00146 NADH dehydrogenase 27 342 5.6E-126 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 JE55_RS14430 74daaf597f7a63613c1dc2c4d794bf88 354 PANTHER PTHR11432 6 354 2.8E-162 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 JE55_RS14430 74daaf597f7a63613c1dc2c4d794bf88 354 PANTHER PTHR11432:SF3 6 354 2.8E-162 T 22-04-2016 JE55_RS14430 74daaf597f7a63613c1dc2c4d794bf88 354 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 20 349 24.733 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 JE55_RS14430 74daaf597f7a63613c1dc2c4d794bf88 354 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 232 245 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 JE55_RS14395 ea97dde41317d729db05ecb6a1268323 119 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 22 118 3.1E-38 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 JE55_RS14395 ea97dde41317d729db05ecb6a1268323 119 PANTHER PTHR11058:SF10 3 119 1.9E-59 T 22-04-2016 JE55_RS14395 ea97dde41317d729db05ecb6a1268323 119 PANTHER PTHR11058 3 119 1.9E-59 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 JE55_RS14395 ea97dde41317d729db05ecb6a1268323 119 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 2 119 20.276 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 JE55_RS14160 9bba0f3f0f3facd8dc8ed705debbf86c 259 Gene3D G3DSA:3.40.50.720 3 254 1.4E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14160 9bba0f3f0f3facd8dc8ed705debbf86c 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 253 5.0E-42 T 22-04-2016 JE55_RS14160 9bba0f3f0f3facd8dc8ed705debbf86c 259 PANTHER PTHR24319:SF23 1 253 4.9E-62 T 22-04-2016 JE55_RS14160 9bba0f3f0f3facd8dc8ed705debbf86c 259 SUPERFAMILY SSF51735 7 254 6.91E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14160 9bba0f3f0f3facd8dc8ed705debbf86c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14160 9bba0f3f0f3facd8dc8ed705debbf86c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14160 9bba0f3f0f3facd8dc8ed705debbf86c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14160 9bba0f3f0f3facd8dc8ed705debbf86c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14160 9bba0f3f0f3facd8dc8ed705debbf86c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14160 9bba0f3f0f3facd8dc8ed705debbf86c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 6.1E-23 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS14160 9bba0f3f0f3facd8dc8ed705debbf86c 259 PANTHER PTHR24319 1 253 4.9E-62 T 22-04-2016 JE55_RS14840 6b22778f32a5335a53c169f3b3becbbb 101 TIGRFAM TIGR02953 penta_MxKDx: pentapeptide MXKDX repeat protein 4 87 4.4E-19 T 22-04-2016 IPR014299 Pentapeptide MXKDX repeat protein JE55_RS16725 8e3508fdc8f9865a3f41369361791eef 278 PANTHER PTHR30413:SF7 15 278 5.4E-91 T 22-04-2016 JE55_RS16725 8e3508fdc8f9865a3f41369361791eef 278 PANTHER PTHR30413 15 278 5.4E-91 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS16725 8e3508fdc8f9865a3f41369361791eef 278 TIGRFAM TIGR01291 nodJ: ABC-2 type transporter, NodJ family 26 277 1.6E-100 T 22-04-2016 IPR005981 ABC-2 type transporter, NodJ GO:0005215|GO:0009877|GO:0015772|GO:0016020 JE55_RS16725 8e3508fdc8f9865a3f41369361791eef 278 PIRSF PIRSF006648 1 277 1.0E-22 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS16725 8e3508fdc8f9865a3f41369361791eef 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 163 187 1.4E-54 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS16725 8e3508fdc8f9865a3f41369361791eef 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 51 72 1.4E-54 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS16725 8e3508fdc8f9865a3f41369361791eef 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 200 219 1.4E-54 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS16725 8e3508fdc8f9865a3f41369361791eef 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 220 239 1.4E-54 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS16725 8e3508fdc8f9865a3f41369361791eef 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 126 151 1.4E-54 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS16725 8e3508fdc8f9865a3f41369361791eef 278 PRINTS PR00164 ABC-2 type transport system membrane protein signature 81 103 1.4E-54 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS16725 8e3508fdc8f9865a3f41369361791eef 278 Pfam PF01061 ABC-2 type transporter 31 242 3.3E-23 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 JE55_RS09615 910353ac773e5348f693a5b009cdb268 270 SUPERFAMILY SSF56219 18 262 4.71E-31 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS09615 910353ac773e5348f693a5b009cdb268 270 PANTHER PTHR15822 108 270 2.5E-18 T 22-04-2016 JE55_RS09615 910353ac773e5348f693a5b009cdb268 270 Gene3D G3DSA:3.60.10.10 16 198 5.6E-11 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS09615 910353ac773e5348f693a5b009cdb268 270 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 22 258 1.6E-12 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS09615 910353ac773e5348f693a5b009cdb268 270 PANTHER PTHR15822:SF7 108 270 2.5E-18 T 22-04-2016 JE55_RS10725 61ffab624a6ca05626190d16046fe80f 255 SUPERFAMILY SSF53271 77 250 6.56E-28 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS10725 61ffab624a6ca05626190d16046fe80f 255 PANTHER PTHR11907:SF9 30 255 3.3E-42 T 22-04-2016 JE55_RS10725 61ffab624a6ca05626190d16046fe80f 255 Gene3D G3DSA:3.40.50.2020 78 251 6.4E-24 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like JE55_RS10725 61ffab624a6ca05626190d16046fe80f 255 PANTHER PTHR11907 30 255 3.3E-42 T 22-04-2016 JE55_RS05460 b81d7d0bd3f9956a9b1016ce05a8fbd4 705 PIRSF PIRSF015380 1 703 1.7E-202 T 22-04-2016 IPR011385 Site-specific recombinase Gcr JE55_RS05460 b81d7d0bd3f9956a9b1016ce05a8fbd4 705 Pfam PF10136 Site-specific recombinase 37 691 1.3E-234 T 22-04-2016 IPR011385 Site-specific recombinase Gcr JE55_RS17390 3673807a2711f41e9534ff36becafb53 366 SUPERFAMILY SSF53335 169 345 2.59E-19 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS17390 3673807a2711f41e9534ff36becafb53 366 Gene3D G3DSA:1.10.10.10 29 100 1.1E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS17390 3673807a2711f41e9534ff36becafb53 366 Gene3D G3DSA:3.40.50.150 175 347 6.3E-18 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS07020 e551f9ceb6c90bd380925c178ffa1a8c 79 SUPERFAMILY SSF82657 2 78 1.57E-29 T 22-04-2016 IPR002634 BolA protein JE55_RS07020 e551f9ceb6c90bd380925c178ffa1a8c 79 PANTHER PTHR12735 1 77 1.8E-19 T 22-04-2016 JE55_RS07020 e551f9ceb6c90bd380925c178ffa1a8c 79 Gene3D G3DSA:3.30.300.90 2 78 4.2E-30 T 22-04-2016 IPR002634 BolA protein JE55_RS07020 e551f9ceb6c90bd380925c178ffa1a8c 79 PIRSF PIRSF003113 1 79 1.8E-24 T 22-04-2016 IPR002634 BolA protein JE55_RS07020 e551f9ceb6c90bd380925c178ffa1a8c 79 Pfam PF01722 BolA-like protein 20 75 2.5E-20 T 22-04-2016 IPR002634 BolA protein JE55_RS24465 179f20b5afc93b30c1c5e556cc1873bd 183 Gene3D G3DSA:3.40.1730.10 2 108 7.4E-12 T 22-04-2016 JE55_RS24465 179f20b5afc93b30c1c5e556cc1873bd 183 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 1 61 1.2E-5 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 JE55_RS06735 b080a1ba658e702345006f92bd1aa628 329 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 10 139 1.2E-28 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 JE55_RS06735 b080a1ba658e702345006f92bd1aa628 329 Gene3D G3DSA:3.40.1730.10 8 186 6.6E-40 T 22-04-2016 JE55_RS06735 b080a1ba658e702345006f92bd1aa628 329 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 10 142 2.5E-38 T 22-04-2016 IPR017748 Type VI secretion system-associated, BMAA0400 JE55_RS00990 eaec69af19648a3addc7c35cfc806f8c 317 Gene3D G3DSA:3.20.20.370 6 308 1.5E-108 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 JE55_RS00990 eaec69af19648a3addc7c35cfc806f8c 317 PANTHER PTHR10587 12 305 2.4E-142 T 22-04-2016 JE55_RS00990 eaec69af19648a3addc7c35cfc806f8c 317 PANTHER PTHR10587:SF72 12 305 2.4E-142 T 22-04-2016 JE55_RS00990 eaec69af19648a3addc7c35cfc806f8c 317 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 7 307 2.8E-162 T 22-04-2016 IPR017625 Putative urate catabolism protein JE55_RS00990 eaec69af19648a3addc7c35cfc806f8c 317 Pfam PF01522 Polysaccharide deacetylase 77 167 1.2E-14 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 JE55_RS00990 eaec69af19648a3addc7c35cfc806f8c 317 SUPERFAMILY SSF88713 6 307 4.73E-95 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JE55_RS15245 8793f2c071842655e1e9ed38f6faecda 342 Pfam PF12849 PBP superfamily domain 22 302 1.2E-58 T 22-04-2016 IPR024370 PBP domain JE55_RS15245 8793f2c071842655e1e9ed38f6faecda 342 PIRSF PIRSF002756 4 333 1.7E-106 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JE55_RS15245 8793f2c071842655e1e9ed38f6faecda 342 PANTHER PTHR30570:SF0 19 329 3.1E-127 T 22-04-2016 JE55_RS15245 8793f2c071842655e1e9ed38f6faecda 342 Gene3D G3DSA:3.40.190.10 23 172 1.8E-54 T 22-04-2016 JE55_RS15245 8793f2c071842655e1e9ed38f6faecda 342 Gene3D G3DSA:3.40.190.10 176 331 1.7E-30 T 22-04-2016 JE55_RS15245 8793f2c071842655e1e9ed38f6faecda 342 PANTHER PTHR30570 19 329 3.1E-127 T 22-04-2016 JE55_RS15245 8793f2c071842655e1e9ed38f6faecda 342 SUPERFAMILY SSF53850 24 329 3.48E-96 T 22-04-2016 JE55_RS15245 8793f2c071842655e1e9ed38f6faecda 342 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 24 331 9.8E-139 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 JE55_RS01870 e47fe0359a54881ed2c9b13ea3633eb5 96 Gene3D G3DSA:2.40.10.180 3 95 2.2E-6 T 22-04-2016 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 JE55_RS17665 8fbffaa1a60f2f8f9247cf6b942b5934 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 JE55_RS17665 8fbffaa1a60f2f8f9247cf6b942b5934 490 PANTHER PTHR11699 3 483 5.1E-203 T 22-04-2016 JE55_RS17665 8fbffaa1a60f2f8f9247cf6b942b5934 490 Gene3D G3DSA:3.40.605.10 3 262 8.4E-90 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 JE55_RS17665 8fbffaa1a60f2f8f9247cf6b942b5934 490 Gene3D G3DSA:3.40.309.10 263 439 1.1E-65 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 JE55_RS17665 8fbffaa1a60f2f8f9247cf6b942b5934 490 SUPERFAMILY SSF53720 2 477 2.49E-158 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 JE55_RS17665 8fbffaa1a60f2f8f9247cf6b942b5934 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 JE55_RS17665 8fbffaa1a60f2f8f9247cf6b942b5934 490 Pfam PF00171 Aldehyde dehydrogenase family 17 474 2.0E-163 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 JE55_RS00350 247c7c3c20efa990e55fa44b7118a1d9 124 PANTHER PTHR21192:SF3 17 122 1.8E-27 T 22-04-2016 JE55_RS00350 247c7c3c20efa990e55fa44b7118a1d9 124 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 14 121 3.2E-33 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein JE55_RS00350 247c7c3c20efa990e55fa44b7118a1d9 124 PANTHER PTHR21192 17 122 1.8E-27 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein JE55_RS00350 247c7c3c20efa990e55fa44b7118a1d9 124 Gene3D G3DSA:3.40.1230.10 1 123 2.7E-47 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein JE55_RS00350 247c7c3c20efa990e55fa44b7118a1d9 124 SUPERFAMILY SSF64076 2 122 5.49E-37 T 22-04-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein JE55_RS08680 3323e0a13e42fd13799c0efb68fd04b6 416 Gene3D G3DSA:1.10.40.60 275 309 4.5E-5 T 22-04-2016 JE55_RS08680 3323e0a13e42fd13799c0efb68fd04b6 416 SUPERFAMILY SSF54523 375 407 2.35E-7 T 22-04-2016 JE55_RS08680 3323e0a13e42fd13799c0efb68fd04b6 416 SUPERFAMILY SSF54523 95 160 2.35E-7 T 22-04-2016 JE55_RS08680 3323e0a13e42fd13799c0efb68fd04b6 416 Gene3D G3DSA:3.30.1300.30 376 409 1.4E-5 T 22-04-2016 JE55_RS08680 3323e0a13e42fd13799c0efb68fd04b6 416 Gene3D G3DSA:3.30.1300.30 86 158 1.4E-5 T 22-04-2016 JE55_RS08680 3323e0a13e42fd13799c0efb68fd04b6 416 Pfam PF03934 Type II secretion system (T2SS), protein K 89 407 5.0E-90 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 JE55_RS08680 3323e0a13e42fd13799c0efb68fd04b6 416 SUPERFAMILY SSF158544 176 309 8.11E-17 T 22-04-2016 JE55_RS15075 4b96c3cbc0991971d00186d5ce3a70c5 255 Pfam PF03818 Malonate/sodium symporter MadM subunit 3 61 2.5E-25 T 22-04-2016 IPR018402 Malonate/sodium symporter MadM subunit, N-terminal JE55_RS15075 4b96c3cbc0991971d00186d5ce3a70c5 255 TIGRFAM TIGR00808 malonate_madM: malonate transporter, MadM subunit 1 254 2.4E-117 T 22-04-2016 IPR004691 Malonate/sodium symporter MadM subunit GO:0044668 JE55_RS09975 3db701b531310622d0b707ba21be1103 523 PANTHER PTHR30097 57 423 5.3E-75 T 22-04-2016 JE55_RS09975 3db701b531310622d0b707ba21be1103 523 Pfam PF11604 Copper binding periplasmic protein CusF 454 518 1.7E-20 T 22-04-2016 IPR021647 Copper binding periplasmic protein CusF JE55_RS09975 3db701b531310622d0b707ba21be1103 523 Gene3D G3DSA:2.40.50.100 139 173 5.5E-7 T 22-04-2016 JE55_RS09975 3db701b531310622d0b707ba21be1103 523 Gene3D G3DSA:2.40.50.100 225 256 5.5E-7 T 22-04-2016 JE55_RS09975 3db701b531310622d0b707ba21be1103 523 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 123 330 7.2E-60 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JE55_RS09975 3db701b531310622d0b707ba21be1103 523 SUPERFAMILY SSF111369 210 335 3.92E-12 T 22-04-2016 JE55_RS09975 3db701b531310622d0b707ba21be1103 523 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 190 406 1.0E-38 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 JE55_RS09975 3db701b531310622d0b707ba21be1103 523 PANTHER PTHR30097:SF3 57 423 5.3E-75 T 22-04-2016 JE55_RS17100 d166606bb6dff7571ab14961efc5a3db 737 PANTHER PTHR32552:SF17 78 737 8.4E-163 T 22-04-2016 JE55_RS17100 d166606bb6dff7571ab14961efc5a3db 737 PANTHER PTHR32552:SF17 54 59 8.4E-163 T 22-04-2016 JE55_RS17100 d166606bb6dff7571ab14961efc5a3db 737 Gene3D G3DSA:2.170.130.10 70 192 7.2E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 JE55_RS17100 d166606bb6dff7571ab14961efc5a3db 737 Pfam PF07715 TonB-dependent Receptor Plug Domain 88 185 3.6E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 JE55_RS17100 d166606bb6dff7571ab14961efc5a3db 737 PANTHER PTHR32552 78 737 8.4E-163 T 22-04-2016 JE55_RS17100 d166606bb6dff7571ab14961efc5a3db 737 PANTHER PTHR32552 54 59 8.4E-163 T 22-04-2016 JE55_RS17100 d166606bb6dff7571ab14961efc5a3db 737 Gene3D G3DSA:2.40.170.20 200 737 3.7E-153 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 JE55_RS17100 d166606bb6dff7571ab14961efc5a3db 737 SUPERFAMILY SSF56935 52 737 2.49E-130 T 22-04-2016 JE55_RS17100 d166606bb6dff7571ab14961efc5a3db 737 Pfam PF00593 TonB dependent receptor 500 736 1.8E-31 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 JE55_RS17100 d166606bb6dff7571ab14961efc5a3db 737 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 88 736 3.1E-104 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 JE55_RS08005 663603afb4a403468003177e4ea78ee9 296 PANTHER PTHR12862 4 290 1.1E-38 T 22-04-2016 JE55_RS08005 663603afb4a403468003177e4ea78ee9 296 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 8 283 2.2E-24 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type JE55_RS08005 663603afb4a403468003177e4ea78ee9 296 SUPERFAMILY SSF53067 6 111 2.51E-20 T 22-04-2016 JE55_RS08005 663603afb4a403468003177e4ea78ee9 296 SUPERFAMILY SSF53067 115 283 1.47E-39 T 22-04-2016 JE55_RS08005 663603afb4a403468003177e4ea78ee9 296 Gene3D G3DSA:3.30.420.40 7 81 3.7E-4 T 22-04-2016 JE55_RS20240 da7e4122cde68660de86db43cd6c989f 61 PANTHER PTHR30255:SF2 7 61 6.6E-17 T 22-04-2016 JE55_RS20240 da7e4122cde68660de86db43cd6c989f 61 SUPERFAMILY SSF64182 5 60 1.59E-13 T 22-04-2016 JE55_RS20240 da7e4122cde68660de86db43cd6c989f 61 PANTHER PTHR30255 7 61 6.6E-17 T 22-04-2016 JE55_RS07220 fd16686c77221a8a0edda40a1fd43168 725 Pfam PF05140 ResB-like family 27 696 8.8E-163 T 22-04-2016 IPR007816 ResB-like domain JE55_RS07220 fd16686c77221a8a0edda40a1fd43168 725 PANTHER PTHR31566 230 444 1.4E-42 T 22-04-2016 JE55_RS07220 fd16686c77221a8a0edda40a1fd43168 725 PANTHER PTHR31566 588 725 1.4E-42 T 22-04-2016 JE55_RS07220 fd16686c77221a8a0edda40a1fd43168 725 PANTHER PTHR31566 16 195 1.4E-42 T 22-04-2016 JE55_RS05660 4beb20015d951b173ab99f751968a799 139 PANTHER PTHR11527 1 139 1.9E-22 T 22-04-2016 IPR031107 Small heat shock protein HSP20 JE55_RS05660 4beb20015d951b173ab99f751968a799 139 Gene3D G3DSA:2.60.40.790 17 137 4.0E-25 T 22-04-2016 IPR008978 HSP20-like chaperone JE55_RS05660 4beb20015d951b173ab99f751968a799 139 PANTHER PTHR11527:SF118 1 139 1.9E-22 T 22-04-2016 JE55_RS05660 4beb20015d951b173ab99f751968a799 139 SUPERFAMILY SSF49764 25 137 1.64E-27 T 22-04-2016 IPR008978 HSP20-like chaperone JE55_RS05660 4beb20015d951b173ab99f751968a799 139 Pfam PF00011 Hsp20/alpha crystallin family 39 137 7.7E-16 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain JE55_RS01205 015806262425feace09d382fd69c9ab6 271 Pfam PF00557 Metallopeptidase family M24 13 246 3.8E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS01205 015806262425feace09d382fd69c9ab6 271 PRINTS PR00599 Methionine aminopeptidase-1 signature 197 209 4.4E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase JE55_RS01205 015806262425feace09d382fd69c9ab6 271 PRINTS PR00599 Methionine aminopeptidase-1 signature 96 112 4.4E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase JE55_RS01205 015806262425feace09d382fd69c9ab6 271 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 4.4E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase JE55_RS01205 015806262425feace09d382fd69c9ab6 271 PRINTS PR00599 Methionine aminopeptidase-1 signature 166 178 4.4E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase JE55_RS01205 015806262425feace09d382fd69c9ab6 271 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 253 1.9E-94 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 JE55_RS01205 015806262425feace09d382fd69c9ab6 271 SUPERFAMILY SSF55920 4 254 3.27E-89 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS01205 015806262425feace09d382fd69c9ab6 271 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 172 190 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 JE55_RS01205 015806262425feace09d382fd69c9ab6 271 Gene3D G3DSA:3.90.230.10 3 254 1.6E-96 T 22-04-2016 IPR000994 Peptidase M24, structural domain JE55_RS01205 015806262425feace09d382fd69c9ab6 271 Hamap MF_01974 Methionine aminopeptidase [map]. 3 255 40.841 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 JE55_RS01205 015806262425feace09d382fd69c9ab6 271 PANTHER PTHR10804 1 253 1.9E-149 T 22-04-2016 JE55_RS01205 015806262425feace09d382fd69c9ab6 271 PANTHER PTHR10804:SF75 1 253 1.9E-149 T 22-04-2016 JE55_RS17710 eee7858265b16e907eb54cd4bf55eab4 50 Pfam PF00872 Transposase, Mutator family 1 48 7.6E-7 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 JE55_RS04020 d1c3514b75e7c8bf1bbcc7c30345c54e 206 PANTHER PTHR30506 3 205 1.7E-52 T 22-04-2016 JE55_RS04020 d1c3514b75e7c8bf1bbcc7c30345c54e 206 Pfam PF03458 UPF0126 domain 99 172 1.9E-22 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 JE55_RS04020 d1c3514b75e7c8bf1bbcc7c30345c54e 206 Pfam PF03458 UPF0126 domain 11 81 1.0E-18 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 JE55_RS09320 c4c1c7327bd6566568ac0f70bd8326ac 496 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 9 487 94.083 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS09320 c4c1c7327bd6566568ac0f70bd8326ac 496 Pfam PF01425 Amidase 22 476 5.6E-150 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS09320 c4c1c7327bd6566568ac0f70bd8326ac 496 Gene3D G3DSA:3.90.1300.10 3 493 9.2E-180 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS09320 c4c1c7327bd6566568ac0f70bd8326ac 496 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 10 487 7.8E-177 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS09320 c4c1c7327bd6566568ac0f70bd8326ac 496 ProSitePatterns PS00571 Amidases signature. 148 179 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS09320 c4c1c7327bd6566568ac0f70bd8326ac 496 PANTHER PTHR11895:SF7 4 493 3.9E-214 T 22-04-2016 JE55_RS09320 c4c1c7327bd6566568ac0f70bd8326ac 496 SUPERFAMILY SSF75304 3 491 6.15E-160 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS09320 c4c1c7327bd6566568ac0f70bd8326ac 496 PANTHER PTHR11895 4 493 3.9E-214 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 JE55_RS05450 4cf35e40471a773ec672efecb693b023 551 PANTHER PTHR30462 40 483 1.8E-92 T 22-04-2016 JE55_RS05450 4cf35e40471a773ec672efecb693b023 551 Pfam PF02470 MlaD protein 65 156 8.8E-13 T 22-04-2016 IPR003399 Mce/MlaD JE55_RS05450 4cf35e40471a773ec672efecb693b023 551 Pfam PF02470 MlaD protein 180 238 2.2E-7 T 22-04-2016 IPR003399 Mce/MlaD JE55_RS05450 4cf35e40471a773ec672efecb693b023 551 Pfam PF02470 MlaD protein 308 413 5.7E-16 T 22-04-2016 IPR003399 Mce/MlaD JE55_RS05450 4cf35e40471a773ec672efecb693b023 551 PANTHER PTHR30462:SF2 40 483 1.8E-92 T 22-04-2016 JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 PANTHER PTHR12631 328 373 3.8E-25 T 22-04-2016 JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 PANTHER PTHR12631 247 302 3.8E-25 T 22-04-2016 JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 PANTHER PTHR12631 9 223 3.8E-25 T 22-04-2016 JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 PANTHER PTHR12631:SF4 328 373 3.8E-25 T 22-04-2016 JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 PANTHER PTHR12631:SF4 247 302 3.8E-25 T 22-04-2016 JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 PANTHER PTHR12631:SF4 9 223 3.8E-25 T 22-04-2016 JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 54 375 4.1E-9 T 22-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 SUPERFAMILY SSF51445 403 456 4.66E-39 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 SUPERFAMILY SSF51445 58 231 4.66E-39 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 SUPERFAMILY SSF51445 261 288 4.66E-39 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 SUPERFAMILY SSF51445 325 376 4.66E-39 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS16120 38a664aec4c9047dcf5a5a9c6dee2811 510 Gene3D G3DSA:3.20.20.80 41 456 4.4E-69 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 JE55_RS24135 c92f2700490b46d8cd561b89d20346be 334 Gene3D G3DSA:3.40.1190.10 2 124 6.8E-57 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS24135 c92f2700490b46d8cd561b89d20346be 334 Gene3D G3DSA:3.40.1190.10 156 217 6.8E-57 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS24135 c92f2700490b46d8cd561b89d20346be 334 Gene3D G3DSA:3.90.190.20 219 334 3.0E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS24135 c92f2700490b46d8cd561b89d20346be 334 SUPERFAMILY SSF53244 217 334 6.1E-32 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS24135 c92f2700490b46d8cd561b89d20346be 334 SUPERFAMILY SSF53623 3 126 3.09E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS24135 c92f2700490b46d8cd561b89d20346be 334 SUPERFAMILY SSF53623 158 215 3.09E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS24135 c92f2700490b46d8cd561b89d20346be 334 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 3 334 3.3E-72 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 JE55_RS24135 c92f2700490b46d8cd561b89d20346be 334 Pfam PF08245 Mur ligase middle domain 4 198 1.8E-17 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 JE55_RS24135 c92f2700490b46d8cd561b89d20346be 334 PANTHER PTHR23135:SF2 5 334 7.8E-83 T 22-04-2016 JE55_RS24135 c92f2700490b46d8cd561b89d20346be 334 PANTHER PTHR23135 5 334 7.8E-83 T 22-04-2016 JE55_RS24135 c92f2700490b46d8cd561b89d20346be 334 Pfam PF02875 Mur ligase family, glutamate ligase domain 219 279 3.6E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 JE55_RS15355 45ccc7ed5003cad777c356ecb2456885 105 Pfam PF10052 Protein of unknown function (DUF2288) 15 102 6.9E-31 T 22-04-2016 IPR018741 Protein of unknown function DUF2288 JE55_RS02815 4a9ea427b00a4933142632cbabdf852b 290 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 28 263 7.0E-61 T 22-04-2016 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related JE55_RS06800 6016cebad69da4fa3e25ae1317330097 261 PANTHER PTHR38033 32 248 1.3E-22 T 22-04-2016 JE55_RS06800 6016cebad69da4fa3e25ae1317330097 261 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 31 235 1.5E-59 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU JE55_RS06800 6016cebad69da4fa3e25ae1317330097 261 PANTHER PTHR38033:SF1 32 248 1.3E-22 T 22-04-2016 JE55_RS06800 6016cebad69da4fa3e25ae1317330097 261 Pfam PF09850 Type VI secretion system protein DotU 32 230 1.8E-58 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU JE55_RS02640 4e2b9483923f241a91f02fbe08763fae 201 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 22 201 1.5E-82 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 JE55_RS02640 4e2b9483923f241a91f02fbe08763fae 201 PANTHER PTHR11403:SF2 22 201 5.2E-92 T 22-04-2016 JE55_RS02640 4e2b9483923f241a91f02fbe08763fae 201 Gene3D G3DSA:1.20.120.80 19 198 2.7E-49 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 JE55_RS02640 4e2b9483923f241a91f02fbe08763fae 201 Pfam PF00510 Cytochrome c oxidase subunit III 23 197 8.7E-13 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 JE55_RS02640 4e2b9483923f241a91f02fbe08763fae 201 SUPERFAMILY SSF81452 18 197 8.63E-54 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 JE55_RS02640 4e2b9483923f241a91f02fbe08763fae 201 PANTHER PTHR11403 22 201 5.2E-92 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 JE55_RS14930 7be4e2698c7ab3f46b00b8611a8ef861 145 Pfam PF13609 Gram-negative porin 21 79 4.5E-7 T 22-04-2016 JE55_RS14930 7be4e2698c7ab3f46b00b8611a8ef861 145 Gene3D G3DSA:2.40.160.10 35 77 4.3E-7 T 22-04-2016 IPR023614 Porin domain JE55_RS14930 7be4e2698c7ab3f46b00b8611a8ef861 145 SUPERFAMILY SSF56935 28 80 1.69E-7 T 22-04-2016 JE55_RS14690 0d51957b21fd15548546b9409640390d 209 Gene3D G3DSA:3.40.50.720 1 195 6.1E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14690 0d51957b21fd15548546b9409640390d 209 PANTHER PTHR15020 3 185 3.8E-28 T 22-04-2016 JE55_RS14690 0d51957b21fd15548546b9409640390d 209 Pfam PF13460 NAD(P)H-binding 9 185 7.7E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS14690 0d51957b21fd15548546b9409640390d 209 SUPERFAMILY SSF51735 1 200 4.88E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS00720 0a590ecbfec5b32ad76330896ff89407 109 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 6 101 3.9E-13 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 JE55_RS00720 0a590ecbfec5b32ad76330896ff89407 109 Gene3D G3DSA:3.30.160.100 5 100 1.1E-14 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 JE55_RS00720 0a590ecbfec5b32ad76330896ff89407 109 SUPERFAMILY SSF69754 5 107 8.89E-18 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 JE55_RS03435 373bd016270113a71d81371eeef78515 314 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 55 306 1.3E-64 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 JE55_RS03435 373bd016270113a71d81371eeef78515 314 Gene3D G3DSA:1.10.40.50 250 311 7.8E-23 T 22-04-2016 JE55_RS03435 373bd016270113a71d81371eeef78515 314 Gene3D G3DSA:3.40.50.300 91 248 2.7E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03435 373bd016270113a71d81371eeef78515 314 SUPERFAMILY SSF52540 92 309 2.35E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS03435 373bd016270113a71d81371eeef78515 314 SUPERFAMILY SSF50249 20 78 7.28E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03435 373bd016270113a71d81371eeef78515 314 Gene3D G3DSA:2.40.50.140 19 75 7.4E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS03435 373bd016270113a71d81371eeef78515 314 PANTHER PTHR32120 17 312 8.5E-98 T 22-04-2016 JE55_RS03435 373bd016270113a71d81371eeef78515 314 Pfam PF03193 Protein of unknown function, DUF258 76 248 1.2E-49 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 JE55_RS03435 373bd016270113a71d81371eeef78515 314 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 20 313 34.593 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 JE55_RS24665 fb8f8e2c34d104012570caf6c31ba7f2 35 PANTHER PTHR19271 1 35 3.4E-18 T 22-04-2016 JE55_RS24665 fb8f8e2c34d104012570caf6c31ba7f2 35 PANTHER PTHR19271:SF9 1 35 3.4E-18 T 22-04-2016 JE55_RS24665 fb8f8e2c34d104012570caf6c31ba7f2 35 Gene3D G3DSA:1.20.810.10 1 35 9.9E-15 T 22-04-2016 IPR027387 Cytochrome b/b6-like domain JE55_RS24665 fb8f8e2c34d104012570caf6c31ba7f2 35 SUPERFAMILY SSF81342 1 35 2.67E-12 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 JE55_RS24665 fb8f8e2c34d104012570caf6c31ba7f2 35 Pfam PF13631 Cytochrome b(N-terminal)/b6/petB 1 35 2.9E-10 T 22-04-2016 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 JE55_RS17470 42250af589e92cb1eccfa21c39a60949 103 Pfam PF10048 Predicted integral membrane protein (DUF2282) 42 93 9.1E-23 T 22-04-2016 IPR018740 Protein of unknown function DUF2282, integral membrane JE55_RS00545 f8f834b63117d4b20186a3178e7219e5 168 SUPERFAMILY SSF55729 6 166 3.77E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS00545 f8f834b63117d4b20186a3178e7219e5 168 PANTHER PTHR23091:SF187 1 165 8.6E-31 T 22-04-2016 JE55_RS00545 f8f834b63117d4b20186a3178e7219e5 168 Pfam PF13420 Acetyltransferase (GNAT) domain 7 145 3.8E-14 T 22-04-2016 JE55_RS00545 f8f834b63117d4b20186a3178e7219e5 168 Gene3D G3DSA:3.40.630.30 6 166 1.6E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS00545 f8f834b63117d4b20186a3178e7219e5 168 PANTHER PTHR23091 1 165 8.6E-31 T 22-04-2016 JE55_RS10160 149127df25da5493b59d83fa4ad55144 100 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 6 95 5.9E-16 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD JE55_RS06965 2ecca12bad9d55f75d9ec9bb99ffc44a 122 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 13 100 3.1E-13 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 JE55_RS06965 2ecca12bad9d55f75d9ec9bb99ffc44a 122 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 7 97 20.285 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 JE55_RS06965 2ecca12bad9d55f75d9ec9bb99ffc44a 122 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 10 97 1.1E-29 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 JE55_RS06965 2ecca12bad9d55f75d9ec9bb99ffc44a 122 SUPERFAMILY SSF101386 8 101 2.24E-23 T 22-04-2016 JE55_RS06965 2ecca12bad9d55f75d9ec9bb99ffc44a 122 PANTHER PTHR21256 8 120 2.4E-38 T 22-04-2016 JE55_RS03095 63d077a552fc241dd13e18ed5196062e 342 PANTHER PTHR30480:SF7 8 331 2.2E-101 T 22-04-2016 JE55_RS03095 63d077a552fc241dd13e18ed5196062e 342 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 303 2.8E-67 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JE55_RS03095 63d077a552fc241dd13e18ed5196062e 342 Gene3D G3DSA:3.20.20.300 7 309 1.8E-86 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 JE55_RS03095 63d077a552fc241dd13e18ed5196062e 342 SUPERFAMILY SSF51445 7 296 3.37E-75 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily JE55_RS03095 63d077a552fc241dd13e18ed5196062e 342 PANTHER PTHR30480 8 331 2.2E-101 T 22-04-2016 JE55_RS03095 63d077a552fc241dd13e18ed5196062e 342 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 7 342 50.433 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 JE55_RS08260 d8736fcbfafcbf74306c0b8b963a8b5a 342 SUPERFAMILY SSF46689 236 286 1.1E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS08260 d8736fcbfafcbf74306c0b8b963a8b5a 342 PANTHER PTHR11019 235 340 1.0E-34 T 22-04-2016 JE55_RS08260 d8736fcbfafcbf74306c0b8b963a8b5a 342 Gene3D G3DSA:1.10.10.60 290 334 9.8E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS08260 d8736fcbfafcbf74306c0b8b963a8b5a 342 PANTHER PTHR11019:SF117 235 340 1.0E-34 T 22-04-2016 JE55_RS08260 d8736fcbfafcbf74306c0b8b963a8b5a 342 Pfam PF12833 Helix-turn-helix domain 258 337 1.9E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS08260 d8736fcbfafcbf74306c0b8b963a8b5a 342 Gene3D G3DSA:1.10.10.60 234 289 1.2E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS08260 d8736fcbfafcbf74306c0b8b963a8b5a 342 SMART SM00342 252 336 1.2E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 JE55_RS09225 9be3fd0b37ba24c3ab6350c6b8cdd573 211 PIRSF PIRSF006324 1 211 3.8E-62 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS09225 9be3fd0b37ba24c3ab6350c6b8cdd573 211 Pfam PF01810 LysE type translocator 17 209 1.0E-38 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS09225 9be3fd0b37ba24c3ab6350c6b8cdd573 211 PANTHER PTHR30086:SF2 2 208 7.1E-68 T 22-04-2016 JE55_RS09225 9be3fd0b37ba24c3ab6350c6b8cdd573 211 PANTHER PTHR30086 2 208 7.1E-68 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS00755 ca2162787e9bfe69bbf337004608f50d 149 Gene3D G3DSA:1.10.10.10 3 144 9.2E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00755 ca2162787e9bfe69bbf337004608f50d 149 SUPERFAMILY SSF46785 8 145 7.42E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00755 ca2162787e9bfe69bbf337004608f50d 149 PANTHER PTHR33164 2 149 3.7E-25 T 22-04-2016 JE55_RS00755 ca2162787e9bfe69bbf337004608f50d 149 Pfam PF12802 MarR family 35 93 1.2E-12 T 22-04-2016 JE55_RS00755 ca2162787e9bfe69bbf337004608f50d 149 SMART SM00347 30 130 7.2E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS00755 ca2162787e9bfe69bbf337004608f50d 149 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site JE55_RS00755 ca2162787e9bfe69bbf337004608f50d 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 4.3E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS00755 ca2162787e9bfe69bbf337004608f50d 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 4.3E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS00755 ca2162787e9bfe69bbf337004608f50d 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 4.3E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS00755 ca2162787e9bfe69bbf337004608f50d 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 4.3E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS09860 c4b3c57a5006392c58075f531c8189e8 273 Gene3D G3DSA:3.40.50.1820 125 176 7.2E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS09860 c4b3c57a5006392c58075f531c8189e8 273 Gene3D G3DSA:3.40.50.1820 36 81 7.2E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS17190 3b8ae1ad15f3ec8881f85806c06ede59 208 Pfam PF02570 Precorrin-8X methylmutase 11 205 2.3E-72 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 JE55_RS17190 3b8ae1ad15f3ec8881f85806c06ede59 208 PANTHER PTHR32439 2 203 5.6E-70 T 22-04-2016 JE55_RS17190 3b8ae1ad15f3ec8881f85806c06ede59 208 SUPERFAMILY SSF63965 1 206 7.06E-74 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 JE55_RS17190 3b8ae1ad15f3ec8881f85806c06ede59 208 Gene3D G3DSA:3.40.50.10230 2 205 2.8E-80 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 JE55_RS01360 3c54866130a6f4bae34b2fa8c6dd8c1b 144 SUPERFAMILY SSF52402 1 144 2.51E-34 T 22-04-2016 JE55_RS01360 3c54866130a6f4bae34b2fa8c6dd8c1b 144 PANTHER PTHR31964 1 144 4.9E-30 T 22-04-2016 JE55_RS01360 3c54866130a6f4bae34b2fa8c6dd8c1b 144 Pfam PF00582 Universal stress protein family 1 144 6.1E-31 T 22-04-2016 IPR006016 UspA GO:0006950 JE55_RS01360 3c54866130a6f4bae34b2fa8c6dd8c1b 144 Gene3D G3DSA:3.40.50.620 1 144 2.1E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS01360 3c54866130a6f4bae34b2fa8c6dd8c1b 144 PANTHER PTHR31964:SF26 1 144 4.9E-30 T 22-04-2016 JE55_RS01360 3c54866130a6f4bae34b2fa8c6dd8c1b 144 PRINTS PR01438 Universal stress protein signature 104 116 6.7E-16 T 22-04-2016 IPR006015 Universal stress protein A JE55_RS01360 3c54866130a6f4bae34b2fa8c6dd8c1b 144 PRINTS PR01438 Universal stress protein signature 122 144 6.7E-16 T 22-04-2016 IPR006015 Universal stress protein A JE55_RS01360 3c54866130a6f4bae34b2fa8c6dd8c1b 144 PRINTS PR01438 Universal stress protein signature 2 20 6.7E-16 T 22-04-2016 IPR006015 Universal stress protein A JE55_RS04410 18e8e390498a54c7bdd966835ba5867f 277 PANTHER PTHR30413:SF8 13 277 9.7E-58 T 22-04-2016 JE55_RS04410 18e8e390498a54c7bdd966835ba5867f 277 Pfam PF01061 ABC-2 type transporter 24 238 2.1E-31 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 JE55_RS04410 18e8e390498a54c7bdd966835ba5867f 277 PANTHER PTHR30413 13 277 9.7E-58 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS04410 18e8e390498a54c7bdd966835ba5867f 277 PIRSF PIRSF006648 4 272 4.7E-16 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS05510 38700397828b4221c1bd1c4d47cf7259 169 Gene3D G3DSA:3.90.79.10 4 152 4.2E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS05510 38700397828b4221c1bd1c4d47cf7259 169 PANTHER PTHR22769 1 145 1.1E-16 T 22-04-2016 JE55_RS05510 38700397828b4221c1bd1c4d47cf7259 169 Pfam PF00293 NUDIX domain 9 123 2.1E-11 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 JE55_RS05510 38700397828b4221c1bd1c4d47cf7259 169 SUPERFAMILY SSF55811 5 146 3.66E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS05510 38700397828b4221c1bd1c4d47cf7259 169 PANTHER PTHR22769:SF14 1 145 1.1E-16 T 22-04-2016 JE55_RS10230 6be7cbf56cb0bfb89a2dee26e2600c9e 567 Pfam PF00450 Serine carboxypeptidase 95 240 6.0E-9 T 22-04-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 JE55_RS10230 6be7cbf56cb0bfb89a2dee26e2600c9e 567 SUPERFAMILY SSF53474 81 532 2.88E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS10230 6be7cbf56cb0bfb89a2dee26e2600c9e 567 Gene3D G3DSA:3.40.50.1820 69 537 8.1E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS16660 922dfff0c98ef995d7d6dc4c7dbbb6c7 71 Gene3D G3DSA:2.40.50.100 6 69 3.3E-22 T 22-04-2016 JE55_RS16660 922dfff0c98ef995d7d6dc4c7dbbb6c7 71 SUPERFAMILY SSF50331 6 69 1.51E-16 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal JE55_RS16660 922dfff0c98ef995d7d6dc4c7dbbb6c7 71 Pfam PF03459 TOBE domain 8 67 8.9E-16 T 22-04-2016 IPR005116 Transport-associated OB, type 1 JE55_RS16660 922dfff0c98ef995d7d6dc4c7dbbb6c7 71 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 6 69 6.1E-19 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 JE55_RS27580 8229c47ec5d61b7b65b2379daeeb871b 239 SUPERFAMILY SSF53323 104 218 1.44E-16 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 JE55_RS27580 8229c47ec5d61b7b65b2379daeeb871b 239 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 112 216 1.7E-12 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JE55_RS27580 8229c47ec5d61b7b65b2379daeeb871b 239 Gene3D G3DSA:3.40.920.10 105 211 7.1E-14 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 JE55_RS27580 8229c47ec5d61b7b65b2379daeeb871b 239 PANTHER PTHR18968 5 140 6.0E-64 T 22-04-2016 JE55_RS27580 8229c47ec5d61b7b65b2379daeeb871b 239 PANTHER PTHR18968:SF134 5 140 6.0E-64 T 22-04-2016 JE55_RS08750 b7710d5e4c69d417d0f18140635593fa 221 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 92 159 6.6E-23 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 JE55_RS08750 b7710d5e4c69d417d0f18140635593fa 221 Pfam PF04347 Flagellar biosynthesis protein, FliO 104 204 9.7E-19 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 JE55_RS08750 b7710d5e4c69d417d0f18140635593fa 221 PANTHER PTHR38766:SF1 47 160 1.2E-17 T 22-04-2016 JE55_RS08750 b7710d5e4c69d417d0f18140635593fa 221 PANTHER PTHR38766 47 160 1.2E-17 T 22-04-2016 JE55_RS08745 8ed0ee7be1904e74a798d05d44ffdaf3 165 SUPERFAMILY SSF101801 81 163 1.31E-25 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) JE55_RS08745 8ed0ee7be1904e74a798d05d44ffdaf3 165 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 84 154 5.4E-24 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) JE55_RS08745 8ed0ee7be1904e74a798d05d44ffdaf3 165 PANTHER PTHR22617 82 163 4.8E-31 T 22-04-2016 JE55_RS08745 8ed0ee7be1904e74a798d05d44ffdaf3 165 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 81 156 5.3E-32 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 JE55_RS08745 8ed0ee7be1904e74a798d05d44ffdaf3 165 Gene3D G3DSA:2.30.330.10 75 164 3.0E-39 T 22-04-2016 JE55_RS08745 8ed0ee7be1904e74a798d05d44ffdaf3 165 PRINTS PR00956 Flagellar motor switch protein FliN signature 101 117 2.4E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JE55_RS08745 8ed0ee7be1904e74a798d05d44ffdaf3 165 PRINTS PR00956 Flagellar motor switch protein FliN signature 84 100 2.4E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JE55_RS08745 8ed0ee7be1904e74a798d05d44ffdaf3 165 PRINTS PR00956 Flagellar motor switch protein FliN signature 117 130 2.4E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JE55_RS08745 8ed0ee7be1904e74a798d05d44ffdaf3 165 PRINTS PR00956 Flagellar motor switch protein FliN signature 130 145 2.4E-28 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 Pfam PF08544 GHMP kinases C terminal 245 315 4.3E-10 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 SUPERFAMILY SSF55060 190 334 8.22E-28 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 Gene3D G3DSA:3.30.230.10 4 181 8.9E-29 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 Pfam PF00288 GHMP kinases N terminal domain 108 171 2.0E-11 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 PANTHER PTHR32463 1 320 1.1E-75 T 22-04-2016 JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 PIRSF PIRSF036406 4 346 5.3E-147 T 22-04-2016 IPR014606 D,D-heptose 7-phosphate kinase KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 Gene3D G3DSA:3.30.70.890 199 339 5.8E-15 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 SUPERFAMILY SSF54211 5 190 8.35E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 PRINTS PR00960 LmbP protein signature 10 25 5.5E-39 T 22-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 PRINTS PR00960 LmbP protein signature 260 284 5.5E-39 T 22-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 PRINTS PR00960 LmbP protein signature 109 130 5.5E-39 T 22-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 PRINTS PR00960 LmbP protein signature 288 307 5.5E-39 T 22-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 JE55_RS05025 25b319f695892ebcca7c0e924e90425d 346 PRINTS PR00960 LmbP protein signature 151 170 5.5E-39 T 22-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 JE55_RS04615 0329d7de60b04742f0bc20a282c60c3f 371 Gene3D G3DSA:1.10.3470.10 17 371 7.2E-100 T 22-04-2016 IPR029022 ABC transporter, BtuC-like JE55_RS04615 0329d7de60b04742f0bc20a282c60c3f 371 PANTHER PTHR30472:SF32 16 57 2.4E-112 T 22-04-2016 JE55_RS04615 0329d7de60b04742f0bc20a282c60c3f 371 PANTHER PTHR30472:SF32 86 371 2.4E-112 T 22-04-2016 JE55_RS04615 0329d7de60b04742f0bc20a282c60c3f 371 PANTHER PTHR30472 16 57 2.4E-112 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 JE55_RS04615 0329d7de60b04742f0bc20a282c60c3f 371 PANTHER PTHR30472 86 371 2.4E-112 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 JE55_RS04615 0329d7de60b04742f0bc20a282c60c3f 371 SUPERFAMILY SSF81345 89 371 1.57E-77 T 22-04-2016 IPR029022 ABC transporter, BtuC-like JE55_RS04615 0329d7de60b04742f0bc20a282c60c3f 371 SUPERFAMILY SSF81345 14 52 1.57E-77 T 22-04-2016 IPR029022 ABC transporter, BtuC-like JE55_RS04615 0329d7de60b04742f0bc20a282c60c3f 371 Pfam PF01032 FecCD transport family 31 370 3.6E-87 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 JE55_RS14740 acf90b626ee941af55e285b55702d6e3 218 SUPERFAMILY SSF51182 35 208 2.26E-37 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS14740 acf90b626ee941af55e285b55702d6e3 218 Gene3D G3DSA:2.60.120.10 90 208 7.0E-31 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS14740 acf90b626ee941af55e285b55702d6e3 218 Pfam PF05995 Cysteine dioxygenase type I 93 195 5.4E-10 T 22-04-2016 IPR010300 Cysteine dioxygenase type I GO:0005506|GO:0016702|GO:0055114 KEGG: 00270+1.13.11.20|KEGG: 00430+1.13.11.20|MetaCyc: PWY-5331|UniPathway: UPA00012 JE55_RS17485 c5d4dc06ddfaf2bb475e217c37368177 167 PANTHER PTHR33452 15 167 3.3E-12 T 22-04-2016 JE55_RS17485 c5d4dc06ddfaf2bb475e217c37368177 167 Pfam PF07681 DoxX 36 129 3.9E-19 T 22-04-2016 IPR032808 DoxX family JE55_RS05445 4208c8f93e820d6708dc5e4923043708 220 PANTHER PTHR30462 15 213 1.7E-55 T 22-04-2016 JE55_RS05445 4208c8f93e820d6708dc5e4923043708 220 PANTHER PTHR30462:SF1 15 213 1.7E-55 T 22-04-2016 JE55_RS05445 4208c8f93e820d6708dc5e4923043708 220 Pfam PF04403 Paraquat-inducible protein A 57 212 1.3E-56 T 22-04-2016 IPR007498 Paraquat-inducible protein A JE55_RS04530 cef93f6307205198e32026f8596b18bd 532 Pfam PF11170 Protein of unknown function (DUF2957) 90 529 2.0E-150 T 22-04-2016 IPR021340 Protein of unknown function DUF2957 JE55_RS08605 011991e4b090b028960b1c2710fa5bc7 213 Pfam PF12802 MarR family 37 96 1.2E-13 T 22-04-2016 JE55_RS08605 011991e4b090b028960b1c2710fa5bc7 213 SMART SM00347 31 131 1.0E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS08605 011991e4b090b028960b1c2710fa5bc7 213 Gene3D G3DSA:1.10.10.10 13 145 1.7E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08605 011991e4b090b028960b1c2710fa5bc7 213 SUPERFAMILY SSF46785 13 143 2.37E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08605 011991e4b090b028960b1c2710fa5bc7 213 PANTHER PTHR33164 13 155 1.9E-16 T 22-04-2016 JE55_RS01810 015a8869145a895d1dfb9280769599f0 100 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 5 81 5.0E-20 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative JE55_RS13815 cd1041e11f6ab6f8f3900e413f992ac2 183 Pfam PF08897 Domain of unknown function (DUF1841) 44 176 8.2E-61 T 22-04-2016 IPR014993 Protein of unknown function DUF1841 JE55_RS01490 ee1063022f08f322be2cc854c97556e2 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 136 145 2.7E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS01490 ee1063022f08f322be2cc854c97556e2 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 51 58 2.7E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS01490 ee1063022f08f322be2cc854c97556e2 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 111 130 2.7E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS01490 ee1063022f08f322be2cc854c97556e2 257 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 215 223 2.7E-5 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 JE55_RS01490 ee1063022f08f322be2cc854c97556e2 257 SUPERFAMILY SSF52343 103 255 6.02E-36 T 22-04-2016 JE55_RS01490 ee1063022f08f322be2cc854c97556e2 257 PANTHER PTHR19370 7 240 2.9E-109 T 22-04-2016 JE55_RS01490 ee1063022f08f322be2cc854c97556e2 257 PANTHER PTHR19370:SF98 7 240 2.9E-109 T 22-04-2016 JE55_RS01490 ee1063022f08f322be2cc854c97556e2 257 Gene3D G3DSA:3.40.50.80 98 256 2.6E-42 T 22-04-2016 JE55_RS01490 ee1063022f08f322be2cc854c97556e2 257 SUPERFAMILY SSF63380 7 98 1.34E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 JE55_RS01490 ee1063022f08f322be2cc854c97556e2 257 Pfam PF00970 Oxidoreductase FAD-binding domain 16 98 2.5E-9 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain JE55_RS01490 ee1063022f08f322be2cc854c97556e2 257 Gene3D G3DSA:2.40.30.10 7 97 4.5E-31 T 22-04-2016 JE55_RS13245 5ea9d34521d02e6ce1ae19813de27ff5 279 PANTHER PTHR21299:SF1 1 279 1.7E-112 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 JE55_RS13245 5ea9d34521d02e6ce1ae19813de27ff5 279 SUPERFAMILY SSF52374 1 279 1.93E-96 T 22-04-2016 JE55_RS13245 5ea9d34521d02e6ce1ae19813de27ff5 279 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 21 81 3.0E-7 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 JE55_RS13245 5ea9d34521d02e6ce1ae19813de27ff5 279 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 37.353 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 JE55_RS13245 5ea9d34521d02e6ce1ae19813de27ff5 279 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 278 2.5E-87 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 JE55_RS13245 5ea9d34521d02e6ce1ae19813de27ff5 279 Gene3D G3DSA:3.30.1300.10 172 279 4.3E-29 T 22-04-2016 JE55_RS13245 5ea9d34521d02e6ce1ae19813de27ff5 279 Gene3D G3DSA:3.40.50.620 1 169 1.1E-71 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JE55_RS13245 5ea9d34521d02e6ce1ae19813de27ff5 279 PANTHER PTHR21299 1 279 1.7E-112 T 22-04-2016 JE55_RS13245 5ea9d34521d02e6ce1ae19813de27ff5 279 Pfam PF02569 Pantoate-beta-alanine ligase 3 277 2.3E-95 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 36 477 1.7E-154 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 Gene3D G3DSA:1.20.210.10 15 534 8.8E-216 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 74 97 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 436 457 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 358 376 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 299 314 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 386 405 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 27 52 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 101 125 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 202 221 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 253 274 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 173 191 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 144 156 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PRINTS PR01165 Cytochrome c oxidase subunit I signature 323 344 2.2E-119 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 255 309 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PANTHER PTHR10422:SF27 13 535 0.0 T 22-04-2016 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 SUPERFAMILY SSF81442 24 534 2.09E-192 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 28 534 3.5E-212 T 22-04-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS10745 c048cc7199a5069a6615f839869bc5ea 535 PANTHER PTHR10422 13 535 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 JE55_RS06740 e7214051be07fd6389b03e6c94d91f44 312 PRINTS PR01021 OMPA domain signature 210 232 1.8E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS06740 e7214051be07fd6389b03e6c94d91f44 312 PRINTS PR01021 OMPA domain signature 240 255 1.8E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS06740 e7214051be07fd6389b03e6c94d91f44 312 PRINTS PR01021 OMPA domain signature 255 271 1.8E-13 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 JE55_RS06740 e7214051be07fd6389b03e6c94d91f44 312 Pfam PF00691 OmpA family 210 304 6.2E-23 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS06740 e7214051be07fd6389b03e6c94d91f44 312 Gene3D G3DSA:3.30.1330.60 205 309 3.2E-37 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS06740 e7214051be07fd6389b03e6c94d91f44 312 SUPERFAMILY SSF103088 200 309 2.09E-35 T 22-04-2016 IPR006665 OmpA-like domain JE55_RS06740 e7214051be07fd6389b03e6c94d91f44 312 PANTHER PTHR30128 204 308 1.9E-38 T 22-04-2016 JE55_RS00195 c9d44b47f418a3eb1ebb14fe8d543c62 258 SUPERFAMILY SSF53098 3 226 1.65E-43 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS00195 c9d44b47f418a3eb1ebb14fe8d543c62 258 Gene3D G3DSA:3.30.420.10 4 215 1.5E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS00195 c9d44b47f418a3eb1ebb14fe8d543c62 258 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 47 255 1.3E-93 T 22-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like JE55_RS03400 0455d84555b2eedd322fcb26ee2d5b74 167 PIRSF PIRSF000194 1 166 1.6E-62 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 JE55_RS03400 0455d84555b2eedd322fcb26ee2d5b74 167 PANTHER PTHR22778 1 165 2.9E-43 T 22-04-2016 JE55_RS03400 0455d84555b2eedd322fcb26ee2d5b74 167 SUPERFAMILY SSF53597 3 164 7.98E-56 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain JE55_RS03400 0455d84555b2eedd322fcb26ee2d5b74 167 PRINTS PR00070 Dihydrofolate reductase signature 42 53 1.8E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 JE55_RS03400 0455d84555b2eedd322fcb26ee2d5b74 167 PRINTS PR00070 Dihydrofolate reductase signature 95 109 1.8E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 JE55_RS03400 0455d84555b2eedd322fcb26ee2d5b74 167 PRINTS PR00070 Dihydrofolate reductase signature 29 37 1.8E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 JE55_RS03400 0455d84555b2eedd322fcb26ee2d5b74 167 PRINTS PR00070 Dihydrofolate reductase signature 15 25 1.8E-14 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 JE55_RS03400 0455d84555b2eedd322fcb26ee2d5b74 167 Gene3D G3DSA:3.40.430.10 2 164 3.8E-61 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain JE55_RS03400 0455d84555b2eedd322fcb26ee2d5b74 167 PANTHER PTHR22778:SF16 1 165 2.9E-43 T 22-04-2016 JE55_RS03400 0455d84555b2eedd322fcb26ee2d5b74 167 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 JE55_RS03400 0455d84555b2eedd322fcb26ee2d5b74 167 Pfam PF00186 Dihydrofolate reductase 4 163 1.6E-59 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 JE55_RS08595 4f36f1edb2d1596a58973dd0fe138fa8 370 SUPERFAMILY SSF51395 1 354 4.58E-115 T 22-04-2016 JE55_RS08595 4f36f1edb2d1596a58973dd0fe138fa8 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 339 1.8E-61 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 JE55_RS08595 4f36f1edb2d1596a58973dd0fe138fa8 370 PANTHER PTHR22893 1 354 4.0E-148 T 22-04-2016 JE55_RS08595 4f36f1edb2d1596a58973dd0fe138fa8 370 PANTHER PTHR22893:SF7 1 354 4.0E-148 T 22-04-2016 JE55_RS08595 4f36f1edb2d1596a58973dd0fe138fa8 370 Gene3D G3DSA:3.20.20.70 1 357 6.4E-123 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS17570 037c8457888873e80f23879317206795 541 Gene3D G3DSA:1.25.40.10 219 247 7.3E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS17570 037c8457888873e80f23879317206795 541 Gene3D G3DSA:1.25.40.10 4 124 7.3E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS17570 037c8457888873e80f23879317206795 541 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 453 483 3.3E-5 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 JE55_RS17570 037c8457888873e80f23879317206795 541 SUPERFAMILY SSF53756 277 496 1.41E-22 T 22-04-2016 JE55_RS17570 037c8457888873e80f23879317206795 541 Gene3D G3DSA:3.40.50.2000 389 498 3.4E-10 T 22-04-2016 JE55_RS17570 037c8457888873e80f23879317206795 541 SUPERFAMILY SSF48452 34 116 2.01E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS17570 037c8457888873e80f23879317206795 541 SUPERFAMILY SSF48452 222 248 2.01E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS15995 8c93f2555be948a05d973fea65c142c2 262 Pfam PF01048 Phosphorylase superfamily 11 254 2.4E-50 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JE55_RS15995 8c93f2555be948a05d973fea65c142c2 262 PANTHER PTHR21234 12 230 6.5E-37 T 22-04-2016 IPR018017 Nucleoside phosphorylase JE55_RS15995 8c93f2555be948a05d973fea65c142c2 262 Gene3D G3DSA:3.40.50.1580 10 256 8.9E-64 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JE55_RS15995 8c93f2555be948a05d973fea65c142c2 262 SUPERFAMILY SSF53167 11 249 8.51E-59 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 JE55_RS15995 8c93f2555be948a05d973fea65c142c2 262 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 12 247 2.1E-35 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 JE55_RS15995 8c93f2555be948a05d973fea65c142c2 262 PANTHER PTHR21234:SF16 12 230 6.5E-37 T 22-04-2016 JE55_RS04365 49814f7796f14327483a0bd2c7d1c4cc 336 Pfam PF00953 Glycosyl transferase family 4 77 217 1.1E-21 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS04365 49814f7796f14327483a0bd2c7d1c4cc 336 PANTHER PTHR22926:SF3 8 331 1.3E-53 T 22-04-2016 JE55_RS04365 49814f7796f14327483a0bd2c7d1c4cc 336 PANTHER PTHR22926 8 331 1.3E-53 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS06080 2f52d47918a0a2f86326bdc7451469b3 200 PANTHER PTHR33508:SF4 1 198 1.2E-63 T 22-04-2016 JE55_RS06080 2f52d47918a0a2f86326bdc7451469b3 200 Pfam PF01914 MarC family integral membrane protein 4 195 2.1E-48 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JE55_RS06080 2f52d47918a0a2f86326bdc7451469b3 200 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 193 8.6E-30 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 JE55_RS06080 2f52d47918a0a2f86326bdc7451469b3 200 PANTHER PTHR33508 1 198 1.2E-63 T 22-04-2016 JE55_RS06425 c0b0cc6482c8f114ad9a6119e57db3d5 372 PIRSF PIRSF019422 1 372 7.5E-113 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A JE55_RS06425 c0b0cc6482c8f114ad9a6119e57db3d5 372 SMART SM00925 134 267 2.7E-72 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 JE55_RS06425 c0b0cc6482c8f114ad9a6119e57db3d5 372 PANTHER PTHR30124 52 372 2.7E-100 T 22-04-2016 JE55_RS06425 c0b0cc6482c8f114ad9a6119e57db3d5 372 Pfam PF06725 3D domain 295 368 1.8E-25 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 JE55_RS06425 c0b0cc6482c8f114ad9a6119e57db3d5 372 Pfam PF03562 MltA specific insert domain 60 267 1.1E-67 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 JE55_RS06425 c0b0cc6482c8f114ad9a6119e57db3d5 372 PANTHER PTHR30124:SF0 52 372 2.7E-100 T 22-04-2016 JE55_RS06425 c0b0cc6482c8f114ad9a6119e57db3d5 372 Gene3D G3DSA:2.40.40.10 46 154 8.3E-29 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain JE55_RS06425 c0b0cc6482c8f114ad9a6119e57db3d5 372 Gene3D G3DSA:2.40.40.10 178 371 1.6E-62 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain JE55_RS06425 c0b0cc6482c8f114ad9a6119e57db3d5 372 SUPERFAMILY SSF50685 42 371 4.53E-123 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain JE55_RS10400 c35b6ba116f0b102e48196703c8bc2f4 85 Pfam PF12091 Protein of unknown function (DUF3567) 1 85 2.1E-36 T 22-04-2016 IPR021951 Protein of unknown function DUF3567 JE55_RS02710 aadb8639df1dd4e2db38cad0139dd1d5 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 220 4.1E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS02710 aadb8639df1dd4e2db38cad0139dd1d5 229 SUPERFAMILY SSF161098 8 206 2.35E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS02710 aadb8639df1dd4e2db38cad0139dd1d5 229 PANTHER PTHR30133 2 229 9.9E-136 T 22-04-2016 JE55_RS02710 aadb8639df1dd4e2db38cad0139dd1d5 229 PANTHER PTHR30133:SF1 2 229 9.9E-136 T 22-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 JE55_RS02710 aadb8639df1dd4e2db38cad0139dd1d5 229 Gene3D G3DSA:1.10.3720.10 8 220 6.0E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS02710 aadb8639df1dd4e2db38cad0139dd1d5 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 115 1.7E-20 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 JE55_RS22740 06c3e9c2cea3563daad84ebe0dd9b4b3 163 Pfam PF00464 Serine hydroxymethyltransferase 88 162 4.4E-36 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 JE55_RS22740 06c3e9c2cea3563daad84ebe0dd9b4b3 163 PANTHER PTHR11680:SF9 55 163 1.4E-56 T 22-04-2016 JE55_RS22740 06c3e9c2cea3563daad84ebe0dd9b4b3 163 Gene3D G3DSA:3.40.640.10 116 162 1.2E-14 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS22740 06c3e9c2cea3563daad84ebe0dd9b4b3 163 PANTHER PTHR11680 55 163 1.4E-56 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 JE55_RS22740 06c3e9c2cea3563daad84ebe0dd9b4b3 163 SUPERFAMILY SSF53383 84 162 1.61E-33 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS06565 ecacb1ef6b637f5435c9184f7ea77263 207 SUPERFAMILY SSF56784 3 200 8.58E-36 T 22-04-2016 IPR023214 HAD-like domain JE55_RS06565 ecacb1ef6b637f5435c9184f7ea77263 207 PANTHER PTHR12725:SF63 1 204 1.3E-20 T 22-04-2016 JE55_RS06565 ecacb1ef6b637f5435c9184f7ea77263 207 PANTHER PTHR12725 1 204 1.3E-20 T 22-04-2016 JE55_RS06565 ecacb1ef6b637f5435c9184f7ea77263 207 Gene3D G3DSA:3.40.50.1000 1 203 5.6E-35 T 22-04-2016 IPR023214 HAD-like domain JE55_RS06565 ecacb1ef6b637f5435c9184f7ea77263 207 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 3.6E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS06565 ecacb1ef6b637f5435c9184f7ea77263 207 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 98 111 3.6E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS06565 ecacb1ef6b637f5435c9184f7ea77263 207 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 3.6E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS06565 ecacb1ef6b637f5435c9184f7ea77263 207 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 189 3.3E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS06565 ecacb1ef6b637f5435c9184f7ea77263 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 68 186 3.3E-8 T 22-04-2016 IPR023214 HAD-like domain JE55_RS16710 822f93597031596903f79c3069809d91 350 Pfam PF00248 Aldo/keto reductase family 16 341 3.9E-70 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain JE55_RS16710 822f93597031596903f79c3069809d91 350 PANTHER PTHR11732:SF112 155 350 9.3E-167 T 22-04-2016 JE55_RS16710 822f93597031596903f79c3069809d91 350 PANTHER PTHR11732:SF112 1 138 9.3E-167 T 22-04-2016 JE55_RS16710 822f93597031596903f79c3069809d91 350 PANTHER PTHR11732 155 350 9.3E-167 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta JE55_RS16710 822f93597031596903f79c3069809d91 350 PANTHER PTHR11732 1 138 9.3E-167 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta JE55_RS16710 822f93597031596903f79c3069809d91 350 SUPERFAMILY SSF51430 1 348 2.23E-109 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain JE55_RS16710 822f93597031596903f79c3069809d91 350 Gene3D G3DSA:3.20.20.100 1 347 2.4E-108 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain JE55_RS07870 fa7c9205bd9f9ed8278ab29eecc95e18 117 PANTHER PTHR37309:SF1 1 111 3.4E-35 T 22-04-2016 JE55_RS07870 fa7c9205bd9f9ed8278ab29eecc95e18 117 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 4.0E-35 T 22-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV JE55_RS07870 fa7c9205bd9f9ed8278ab29eecc95e18 117 PANTHER PTHR37309 1 111 3.4E-35 T 22-04-2016 JE55_RS00555 1393fe77e840e7b32ef9d1f5822dc343 206 SUPERFAMILY SSF52540 1 199 1.17E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00555 1393fe77e840e7b32ef9d1f5822dc343 206 Pfam PF02223 Thymidylate kinase 9 198 1.3E-44 T 22-04-2016 JE55_RS00555 1393fe77e840e7b32ef9d1f5822dc343 206 Gene3D G3DSA:3.40.50.300 3 204 2.5E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00555 1393fe77e840e7b32ef9d1f5822dc343 206 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 197 4.3E-49 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 JE55_RS00555 1393fe77e840e7b32ef9d1f5822dc343 206 Hamap MF_00165 Thymidylate kinase [tmk]. 5 206 27.967 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 JE55_RS00555 1393fe77e840e7b32ef9d1f5822dc343 206 PANTHER PTHR10344 1 206 2.6E-58 T 22-04-2016 JE55_RS12735 be7522d29b5be3ad1bb3f13b6e583797 175 PANTHER PTHR28026:SF3 1 167 1.9E-52 T 22-04-2016 JE55_RS12735 be7522d29b5be3ad1bb3f13b6e583797 175 PANTHER PTHR28026 1 167 1.9E-52 T 22-04-2016 JE55_RS12735 be7522d29b5be3ad1bb3f13b6e583797 175 Pfam PF06127 Protein of unknown function (DUF962) 1 147 1.7E-25 T 22-04-2016 IPR009305 Protein of unknown function DUF962 JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 PANTHER PTHR23537 357 549 1.1E-16 T 22-04-2016 JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 PANTHER PTHR23537 14 204 1.1E-16 T 22-04-2016 JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 PANTHER PTHR23537 221 243 1.1E-16 T 22-04-2016 JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 Gene3D G3DSA:1.20.1250.20 32 196 1.9E-9 T 22-04-2016 JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 SUPERFAMILY SSF103473 348 541 2.62E-20 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 SUPERFAMILY SSF103473 26 204 2.62E-20 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 PANTHER PTHR23537:SF1 357 549 1.1E-16 T 22-04-2016 JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 PANTHER PTHR23537:SF1 14 204 1.1E-16 T 22-04-2016 JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 PANTHER PTHR23537:SF1 221 243 1.1E-16 T 22-04-2016 JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 35 200 8.3E-43 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 352 535 1.0E-42 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB JE55_RS15850 12c9eff83011b33d262fc92a05c18f66 555 Gene3D G3DSA:1.20.1250.20 365 538 3.1E-5 T 22-04-2016 JE55_RS15930 b2faf4576de4487c8ef83d7243dad0d1 349 Pfam PF13407 Periplasmic binding protein domain 37 290 2.8E-39 T 22-04-2016 IPR025997 Periplasmic binding protein JE55_RS15930 b2faf4576de4487c8ef83d7243dad0d1 349 PANTHER PTHR30036 1 291 2.2E-31 T 22-04-2016 JE55_RS15930 b2faf4576de4487c8ef83d7243dad0d1 349 Gene3D G3DSA:3.40.50.2300 31 154 8.5E-23 T 22-04-2016 JE55_RS15930 b2faf4576de4487c8ef83d7243dad0d1 349 Gene3D G3DSA:3.40.50.2300 155 297 6.9E-25 T 22-04-2016 JE55_RS15930 b2faf4576de4487c8ef83d7243dad0d1 349 SUPERFAMILY SSF53822 41 342 1.19E-45 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS15930 b2faf4576de4487c8ef83d7243dad0d1 349 PANTHER PTHR30036:SF2 1 291 2.2E-31 T 22-04-2016 JE55_RS16825 f7286bd505a94c2e0a0d67b7c0764d69 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 JE55_RS16825 f7286bd505a94c2e0a0d67b7c0764d69 434 SUPERFAMILY SSF103473 18 425 8.89E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS16825 f7286bd505a94c2e0a0d67b7c0764d69 434 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 28 413 1.0E-137 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 JE55_RS16825 f7286bd505a94c2e0a0d67b7c0764d69 434 PANTHER PTHR23508:SF12 13 434 1.0E-275 T 22-04-2016 JE55_RS16825 f7286bd505a94c2e0a0d67b7c0764d69 434 Pfam PF07690 Major Facilitator Superfamily 61 381 2.6E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS16825 f7286bd505a94c2e0a0d67b7c0764d69 434 Gene3D G3DSA:1.20.1250.20 25 226 5.3E-22 T 22-04-2016 JE55_RS16825 f7286bd505a94c2e0a0d67b7c0764d69 434 Gene3D G3DSA:1.20.1250.20 243 426 2.5E-21 T 22-04-2016 JE55_RS16825 f7286bd505a94c2e0a0d67b7c0764d69 434 PANTHER PTHR23508 13 434 1.0E-275 T 22-04-2016 JE55_RS06150 30f0f605e225b38a79567647ac588921 733 Pfam PF13166 AAA domain 17 693 1.9E-102 T 22-04-2016 IPR026866 P-loop containing protein CR006/PrrC JE55_RS06150 30f0f605e225b38a79567647ac588921 733 Gene3D G3DSA:3.40.50.300 149 150 1.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06150 30f0f605e225b38a79567647ac588921 733 Gene3D G3DSA:3.40.50.300 26 78 1.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06150 30f0f605e225b38a79567647ac588921 733 Gene3D G3DSA:3.40.50.300 192 194 1.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06150 30f0f605e225b38a79567647ac588921 733 Gene3D G3DSA:3.40.50.300 433 574 1.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06150 30f0f605e225b38a79567647ac588921 733 SUPERFAMILY SSF52540 456 574 1.18E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06150 30f0f605e225b38a79567647ac588921 733 SUPERFAMILY SSF52540 27 157 1.18E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS11640 489e59feec200d792f49c6d1d31e5ef1 159 Pfam PF09655 Conserved nitrate reductase-associated protein (Nitr_red_assoc) 9 154 3.7E-48 T 22-04-2016 IPR013481 Conserved hypothetical protein CHP02664, nitrate reductase-associated JE55_RS11640 489e59feec200d792f49c6d1d31e5ef1 159 TIGRFAM TIGR02664 nitr_red_assoc: conserved hypothetical protein 9 154 1.1E-61 T 22-04-2016 IPR013481 Conserved hypothetical protein CHP02664, nitrate reductase-associated JE55_RS06210 6cde5ca86a369c04bea3a613d0e422fd 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.5E-24 T 22-04-2016 IPR018076 Type II secretion system F domain JE55_RS06210 6cde5ca86a369c04bea3a613d0e422fd 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 397 5.6E-25 T 22-04-2016 IPR018076 Type II secretion system F domain JE55_RS06210 6cde5ca86a369c04bea3a613d0e422fd 405 PANTHER PTHR30012 12 405 1.5E-112 T 22-04-2016 JE55_RS06210 6cde5ca86a369c04bea3a613d0e422fd 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 JE55_RS06210 6cde5ca86a369c04bea3a613d0e422fd 405 PANTHER PTHR30012:SF0 12 405 1.5E-112 T 22-04-2016 JE55_RS06210 6cde5ca86a369c04bea3a613d0e422fd 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 370 384 2.2E-15 T 22-04-2016 IPR003004 GspF/PilC family JE55_RS06210 6cde5ca86a369c04bea3a613d0e422fd 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.2E-15 T 22-04-2016 IPR003004 GspF/PilC family JE55_RS06210 6cde5ca86a369c04bea3a613d0e422fd 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.2E-15 T 22-04-2016 IPR003004 GspF/PilC family JE55_RS06210 6cde5ca86a369c04bea3a613d0e422fd 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 405 2.2E-15 T 22-04-2016 IPR003004 GspF/PilC family JE55_RS15380 dd514ae7a09e83639ced90eec36ce5dd 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 269 15.581 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JE55_RS15380 dd514ae7a09e83639ced90eec36ce5dd 276 Pfam PF02673 Bacitracin resistance protein BacA 7 263 4.2E-68 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JE55_RS15380 dd514ae7a09e83639ced90eec36ce5dd 276 PANTHER PTHR30622 1 276 1.1E-69 T 22-04-2016 JE55_RS15875 372b13731e9858a4a42f311d9f5ab499 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 JE55_RS15875 372b13731e9858a4a42f311d9f5ab499 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 373 1.7E-103 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 JE55_RS15875 372b13731e9858a4a42f311d9f5ab499 382 PANTHER PTHR11496 8 380 2.3E-88 T 22-04-2016 JE55_RS15875 372b13731e9858a4a42f311d9f5ab499 382 SUPERFAMILY SSF56796 4 380 8.9E-107 T 22-04-2016 JE55_RS15875 372b13731e9858a4a42f311d9f5ab499 382 Gene3D G3DSA:3.40.50.1970 5 183 5.9E-50 T 22-04-2016 JE55_RS15875 372b13731e9858a4a42f311d9f5ab499 382 Gene3D G3DSA:1.20.1090.10 184 381 7.2E-53 T 22-04-2016 JE55_RS15875 372b13731e9858a4a42f311d9f5ab499 382 PANTHER PTHR11496:SF75 8 380 2.3E-88 T 22-04-2016 JE55_RS14290 cceb13aba70697f114872663a66b62bc 169 Pfam PF06271 RDD family 12 159 7.1E-19 T 22-04-2016 IPR010432 RDD JE55_RS13225 954c33ae0b0fa850ae6366fec41e5c4a 545 Gene3D G3DSA:3.40.50.880 309 505 9.1E-27 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS13225 954c33ae0b0fa850ae6366fec41e5c4a 545 SUPERFAMILY SSF52317 310 506 4.86E-38 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS13225 954c33ae0b0fa850ae6366fec41e5c4a 545 Gene3D G3DSA:3.40.50.300 58 290 2.6E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13225 954c33ae0b0fa850ae6366fec41e5c4a 545 PANTHER PTHR21343 38 544 1.4E-221 T 22-04-2016 JE55_RS13225 954c33ae0b0fa850ae6366fec41e5c4a 545 SUPERFAMILY SSF52540 58 293 4.43E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13225 954c33ae0b0fa850ae6366fec41e5c4a 545 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 309 495 1.2E-54 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 JE55_RS13225 954c33ae0b0fa850ae6366fec41e5c4a 545 PANTHER PTHR21343:SF1 38 544 1.4E-221 T 22-04-2016 JE55_RS13225 954c33ae0b0fa850ae6366fec41e5c4a 545 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 59 279 5.7E-31 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS13225 954c33ae0b0fa850ae6366fec41e5c4a 545 Hamap MF_00028 Cobyric acid synthase [cobQ]. 54 545 200.178 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 JE55_RS13225 954c33ae0b0fa850ae6366fec41e5c4a 545 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 59 538 5.6E-141 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 JE55_RS15200 3994096d080ac2fcd26a19e81316e472 220 PANTHER PTHR30086:SF15 6 219 2.8E-101 T 22-04-2016 JE55_RS15200 3994096d080ac2fcd26a19e81316e472 220 Pfam PF01810 LysE type translocator 20 216 8.1E-51 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS15200 3994096d080ac2fcd26a19e81316e472 220 PIRSF PIRSF006324 5 219 1.7E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS15200 3994096d080ac2fcd26a19e81316e472 220 PANTHER PTHR30086 6 219 2.8E-101 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS12310 a08e3c2438f2f4aedd6206f2f40e0cd0 305 PANTHER PTHR21624 6 277 7.6E-91 T 22-04-2016 JE55_RS12310 a08e3c2438f2f4aedd6206f2f40e0cd0 305 Pfam PF04116 Fatty acid hydroxylase superfamily 88 220 1.8E-30 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 JE55_RS12310 a08e3c2438f2f4aedd6206f2f40e0cd0 305 PANTHER PTHR21624:SF2 6 277 7.6E-91 T 22-04-2016 JE55_RS14800 a71f73323ebb97b7cc1666ddb46a622a 134 Pfam PF00472 RF-1 domain 7 129 1.8E-24 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JE55_RS14800 a71f73323ebb97b7cc1666ddb46a622a 134 Gene3D G3DSA:3.30.160.200 5 103 3.0E-32 T 22-04-2016 JE55_RS14800 a71f73323ebb97b7cc1666ddb46a622a 134 PANTHER PTHR11075 9 130 8.5E-35 T 22-04-2016 JE55_RS14800 a71f73323ebb97b7cc1666ddb46a622a 134 SUPERFAMILY SSF75620 5 101 1.22E-11 T 22-04-2016 JE55_RS14800 a71f73323ebb97b7cc1666ddb46a622a 134 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 18 34 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 JE55_RS08350 46c39f2f57ee9093c2f50c501b8fe7c9 384 Pfam PF00155 Aminotransferase class I and II 31 381 3.4E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 JE55_RS08350 46c39f2f57ee9093c2f50c501b8fe7c9 384 SUPERFAMILY SSF53383 10 382 1.18E-96 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase JE55_RS08350 46c39f2f57ee9093c2f50c501b8fe7c9 384 Gene3D G3DSA:3.40.640.10 43 272 6.2E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 JE55_RS08350 46c39f2f57ee9093c2f50c501b8fe7c9 384 PANTHER PTHR11751:SF301 10 384 7.3E-123 T 22-04-2016 JE55_RS08350 46c39f2f57ee9093c2f50c501b8fe7c9 384 Gene3D G3DSA:3.90.1150.10 273 381 5.9E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 JE55_RS08350 46c39f2f57ee9093c2f50c501b8fe7c9 384 PANTHER PTHR11751 10 384 7.3E-123 T 22-04-2016 JE55_RS00400 4f9ad38ed4a9384f57ed78d667b2b464 404 PANTHER PTHR21666 61 176 2.0E-37 T 22-04-2016 JE55_RS00400 4f9ad38ed4a9384f57ed78d667b2b464 404 Pfam PF00877 NlpC/P60 family 67 174 1.9E-26 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS00400 4f9ad38ed4a9384f57ed78d667b2b464 404 SUPERFAMILY SSF54001 53 175 1.03E-37 T 22-04-2016 JE55_RS00400 4f9ad38ed4a9384f57ed78d667b2b464 404 Gene3D G3DSA:3.90.1720.10 53 176 1.7E-40 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS12360 9f3e70e8c962efb0bd634da7c851e97f 420 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 373 1.3E-78 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 JE55_RS12360 9f3e70e8c962efb0bd634da7c851e97f 420 PANTHER PTHR30158:SF3 1 401 3.5E-164 T 22-04-2016 JE55_RS12360 9f3e70e8c962efb0bd634da7c851e97f 420 Gene3D G3DSA:2.40.50.100 170 205 1.9E-21 T 22-04-2016 JE55_RS12360 9f3e70e8c962efb0bd634da7c851e97f 420 Gene3D G3DSA:2.40.50.100 63 95 1.9E-21 T 22-04-2016 JE55_RS12360 9f3e70e8c962efb0bd634da7c851e97f 420 SUPERFAMILY SSF111369 51 298 1.15E-82 T 22-04-2016 JE55_RS12360 9f3e70e8c962efb0bd634da7c851e97f 420 PANTHER PTHR30158 1 401 3.5E-164 T 22-04-2016 JE55_RS12360 9f3e70e8c962efb0bd634da7c851e97f 420 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 291 2.9E-11 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JE55_RS11780 49d973d42b9b8c8b1d5a222f9d7ff064 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 126 142 1.6E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS11780 49d973d42b9b8c8b1d5a222f9d7ff064 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 144 164 1.6E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS11780 49d973d42b9b8c8b1d5a222f9d7ff064 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 94 107 1.6E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS11780 49d973d42b9b8c8b1d5a222f9d7ff064 228 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 1.6E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS11780 49d973d42b9b8c8b1d5a222f9d7ff064 228 Gene3D G3DSA:3.40.50.1000 85 216 3.0E-40 T 22-04-2016 IPR023214 HAD-like domain JE55_RS11780 49d973d42b9b8c8b1d5a222f9d7ff064 228 Gene3D G3DSA:3.40.50.1000 2 17 3.0E-40 T 22-04-2016 IPR023214 HAD-like domain JE55_RS11780 49d973d42b9b8c8b1d5a222f9d7ff064 228 PANTHER PTHR18901 2 216 3.4E-44 T 22-04-2016 JE55_RS11780 49d973d42b9b8c8b1d5a222f9d7ff064 228 SUPERFAMILY SSF56784 1 215 5.56E-46 T 22-04-2016 IPR023214 HAD-like domain JE55_RS11780 49d973d42b9b8c8b1d5a222f9d7ff064 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 181 1.5E-18 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 JE55_RS11780 49d973d42b9b8c8b1d5a222f9d7ff064 228 PANTHER PTHR18901:SF9 2 216 3.4E-44 T 22-04-2016 JE55_RS11780 49d973d42b9b8c8b1d5a222f9d7ff064 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 181 1.1E-19 T 22-04-2016 IPR023214 HAD-like domain JE55_RS00935 c4e5988319c91bca816f68114650689b 143 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 143 24.945 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 JE55_RS00935 c4e5988319c91bca816f68114650689b 143 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site JE55_RS00935 c4e5988319c91bca816f68114650689b 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 106 115 1.5E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 JE55_RS00935 c4e5988319c91bca816f68114650689b 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 97 105 1.5E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 JE55_RS00935 c4e5988319c91bca816f68114650689b 143 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.5E-12 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 JE55_RS00935 c4e5988319c91bca816f68114650689b 143 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 142 6.0E-38 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 JE55_RS00935 c4e5988319c91bca816f68114650689b 143 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 141 1.0E-42 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 JE55_RS00935 c4e5988319c91bca816f68114650689b 143 PANTHER PTHR30266:SF2 1 143 7.6E-45 T 22-04-2016 JE55_RS00935 c4e5988319c91bca816f68114650689b 143 PANTHER PTHR30266 1 143 7.6E-45 T 22-04-2016 JE55_RS00935 c4e5988319c91bca816f68114650689b 143 SUPERFAMILY SSF81330 13 137 1.57E-36 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 PANTHER PTHR10025 1 281 2.4E-162 T 22-04-2016 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 38.967 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 3.3E-40 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 Gene3D G3DSA:3.40.50.720 138 263 1.2E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 2.4E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 2.4E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 2.4E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 2.4E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 2.4E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 2.4E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 2.4E-85 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 1.2E-70 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 SUPERFAMILY SSF51735 122 280 4.04E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 SUPERFAMILY SSF53223 1 121 6.43E-40 T 22-04-2016 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 Gene3D G3DSA:3.40.192.10 7 137 7.8E-50 T 22-04-2016 JE55_RS02240 6ea5bdcd346001915fc6d10fd45cde6f 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 JE55_RS22155 0e70236d898482c2c41dc033abdb0c26 218 PANTHER PTHR30622 1 218 1.5E-90 T 22-04-2016 JE55_RS22155 0e70236d898482c2c41dc033abdb0c26 218 PANTHER PTHR30622:SF3 1 218 1.5E-90 T 22-04-2016 JE55_RS22155 0e70236d898482c2c41dc033abdb0c26 218 Pfam PF02673 Bacitracin resistance protein BacA 1 217 9.3E-64 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 JE55_RS14000 b6305dd84de2c3cb7d59a5241fa62fea 238 TIGRFAM TIGR03398 plc_access_R: phospholipase C accessory protein PlcR 98 237 7.0E-66 T 22-04-2016 IPR017769 Phospholipase C accessory protein PlcR JE55_RS07845 98072ba335dcab3a160085f49b1881e3 380 PANTHER PTHR30483 11 371 4.6E-91 T 22-04-2016 JE55_RS07845 98072ba335dcab3a160085f49b1881e3 380 Pfam PF13458 Periplasmic binding protein 31 359 4.2E-64 T 22-04-2016 IPR028081 Leucine-binding protein domain JE55_RS07845 98072ba335dcab3a160085f49b1881e3 380 PANTHER PTHR30483:SF20 11 371 4.6E-91 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JE55_RS07845 98072ba335dcab3a160085f49b1881e3 380 Gene3D G3DSA:3.40.50.2300 31 231 3.0E-69 T 22-04-2016 JE55_RS07845 98072ba335dcab3a160085f49b1881e3 380 SUPERFAMILY SSF53822 31 375 8.75E-99 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS07845 98072ba335dcab3a160085f49b1881e3 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 4.9E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JE55_RS07845 98072ba335dcab3a160085f49b1881e3 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 4.9E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JE55_RS07845 98072ba335dcab3a160085f49b1881e3 380 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 261 279 4.9E-7 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 JE55_RS02325 8f915e9a647d65bc2d3c7f72d3a55b4c 272 SMART SM00852 4 177 3.5E-32 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS02325 8f915e9a647d65bc2d3c7f72d3a55b4c 272 Pfam PF00994 Probable molybdopterin binding domain 4 170 1.5E-26 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS02325 8f915e9a647d65bc2d3c7f72d3a55b4c 272 PANTHER PTHR13939 1 220 3.3E-30 T 22-04-2016 JE55_RS02325 8f915e9a647d65bc2d3c7f72d3a55b4c 272 SUPERFAMILY SSF53218 1 212 4.06E-38 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS02325 8f915e9a647d65bc2d3c7f72d3a55b4c 272 Gene3D G3DSA:3.40.980.10 137 181 8.2E-32 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS02325 8f915e9a647d65bc2d3c7f72d3a55b4c 272 Gene3D G3DSA:3.40.980.10 1 104 8.2E-32 T 22-04-2016 IPR001453 MoaB/Mog domain JE55_RS03460 8cdd5d0b1af6126e56c4ebb48ae6e066 129 PANTHER PTHR15680 2 118 3.1E-53 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS03460 8cdd5d0b1af6126e56c4ebb48ae6e066 129 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 117 1.8E-47 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS03460 8cdd5d0b1af6126e56c4ebb48ae6e066 129 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS03460 8cdd5d0b1af6126e56c4ebb48ae6e066 129 SUPERFAMILY SSF50104 10 118 8.72E-44 T 22-04-2016 IPR008991 Translation protein SH3-like domain JE55_RS03460 8cdd5d0b1af6126e56c4ebb48ae6e066 129 PIRSF PIRSF002191 1 129 3.1E-51 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS03460 8cdd5d0b1af6126e56c4ebb48ae6e066 129 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 118 29.576 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS03460 8cdd5d0b1af6126e56c4ebb48ae6e066 129 Pfam PF01245 Ribosomal protein L19 5 117 5.8E-46 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS03460 8cdd5d0b1af6126e56c4ebb48ae6e066 129 PRINTS PR00061 Ribosomal protein L19 signature 38 67 1.6E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS03460 8cdd5d0b1af6126e56c4ebb48ae6e066 129 PRINTS PR00061 Ribosomal protein L19 signature 8 37 1.6E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS03460 8cdd5d0b1af6126e56c4ebb48ae6e066 129 PRINTS PR00061 Ribosomal protein L19 signature 92 117 1.6E-35 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07695 3ef295e303066ce68317f2713b672cf6 684 SUPERFAMILY SSF52540 40 201 1.6E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07695 3ef295e303066ce68317f2713b672cf6 684 SUPERFAMILY SSF52540 229 389 1.6E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07695 3ef295e303066ce68317f2713b672cf6 684 Gene3D G3DSA:3.40.50.300 26 202 4.0E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS07695 3ef295e303066ce68317f2713b672cf6 684 Gene3D G3DSA:3.40.50.300 246 391 1.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13340 fab6f6b1d6df97eb8aedf075a564218c 336 SMART SM00972 105 176 4.3E-10 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS13340 fab6f6b1d6df97eb8aedf075a564218c 336 SMART SM00972 274 333 6.8E-26 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS13340 fab6f6b1d6df97eb8aedf075a564218c 336 PANTHER PTHR37089 1 336 9.7E-31 T 22-04-2016 JE55_RS13340 fab6f6b1d6df97eb8aedf075a564218c 336 Pfam PF05229 Spore Coat Protein U domain 200 333 9.3E-37 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS13340 fab6f6b1d6df97eb8aedf075a564218c 336 Pfam PF05229 Spore Coat Protein U domain 38 163 4.1E-17 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS08065 3bf907cf7995f490bd2beb95f2234df7 210 PANTHER PTHR23416:SF23 67 208 2.6E-15 T 22-04-2016 JE55_RS08065 3bf907cf7995f490bd2beb95f2234df7 210 Gene3D G3DSA:2.160.10.10 91 209 1.6E-26 T 22-04-2016 JE55_RS08065 3bf907cf7995f490bd2beb95f2234df7 210 Gene3D G3DSA:3.40.50.20 3 90 4.9E-6 T 22-04-2016 IPR016185 Pre-ATP-grasp domain JE55_RS08065 3bf907cf7995f490bd2beb95f2234df7 210 PANTHER PTHR23416 67 208 2.6E-15 T 22-04-2016 JE55_RS08065 3bf907cf7995f490bd2beb95f2234df7 210 SUPERFAMILY SSF51161 4 209 8.46E-37 T 22-04-2016 IPR011004 Trimeric LpxA-like JE55_RS08065 3bf907cf7995f490bd2beb95f2234df7 210 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 4 208 6.0E-60 T 22-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like JE55_RS08065 3bf907cf7995f490bd2beb95f2234df7 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 159 192 1.0E-7 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS06650 ad85fe50ee22d57470665372346af38b 427 PANTHER PTHR11360:SF137 11 417 1.9E-116 T 22-04-2016 JE55_RS06650 ad85fe50ee22d57470665372346af38b 427 Gene3D G3DSA:1.20.1250.20 235 419 2.4E-18 T 22-04-2016 JE55_RS06650 ad85fe50ee22d57470665372346af38b 427 Gene3D G3DSA:1.20.1250.20 15 205 5.2E-24 T 22-04-2016 JE55_RS06650 ad85fe50ee22d57470665372346af38b 427 PANTHER PTHR11360 11 417 1.9E-116 T 22-04-2016 JE55_RS06650 ad85fe50ee22d57470665372346af38b 427 Pfam PF07690 Major Facilitator Superfamily 22 348 1.2E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS06650 ad85fe50ee22d57470665372346af38b 427 SUPERFAMILY SSF103473 12 423 7.98E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS12760 745dcbb70133e1f5a56a652b55095336 111 Pfam PF11142 Protein of unknown function (DUF2917) 11 65 6.3E-17 T 22-04-2016 IPR021317 Protein of unknown function DUF2917 JE55_RS12760 745dcbb70133e1f5a56a652b55095336 111 SUPERFAMILY SSF51182 15 66 6.2E-5 T 22-04-2016 IPR011051 RmlC-like cupin domain JE55_RS16975 e8e6dc95cf0d9875a6451baa2578044f 341 SUPERFAMILY SSF49401 207 338 1.18E-13 T 22-04-2016 IPR008966 Adhesion domain JE55_RS16975 e8e6dc95cf0d9875a6451baa2578044f 341 Gene3D G3DSA:2.60.40.1090 207 337 5.1E-4 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 JE55_RS16975 e8e6dc95cf0d9875a6451baa2578044f 341 Pfam PF00419 Fimbrial protein 204 338 3.0E-10 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 JE55_RS06220 6e00bd17f1627c15e3e12f7c43f14b61 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 193 27.727 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 JE55_RS06220 6e00bd17f1627c15e3e12f7c43f14b61 203 Gene3D G3DSA:3.40.50.300 1 196 3.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06220 6e00bd17f1627c15e3e12f7c43f14b61 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 187 1.5E-50 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 JE55_RS06220 6e00bd17f1627c15e3e12f7c43f14b61 203 SUPERFAMILY SSF52540 1 192 2.28E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS06220 6e00bd17f1627c15e3e12f7c43f14b61 203 PANTHER PTHR10695 1 196 1.8E-64 T 22-04-2016 JE55_RS06220 6e00bd17f1627c15e3e12f7c43f14b61 203 Pfam PF01121 Dephospho-CoA kinase 4 178 1.5E-59 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 JE55_RS11385 fcbeb0bad94c7c96b791b67060f580be 398 Gene3D G3DSA:3.40.50.2000 213 354 3.8E-14 T 22-04-2016 JE55_RS11385 fcbeb0bad94c7c96b791b67060f580be 398 SUPERFAMILY SSF53756 1 383 1.78E-42 T 22-04-2016 JE55_RS11385 fcbeb0bad94c7c96b791b67060f580be 398 Pfam PF00534 Glycosyl transferases group 1 217 333 2.0E-16 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS11385 fcbeb0bad94c7c96b791b67060f580be 398 PANTHER PTHR12526 153 384 1.4E-25 T 22-04-2016 JE55_RS11385 fcbeb0bad94c7c96b791b67060f580be 398 PANTHER PTHR12526 1 121 1.4E-25 T 22-04-2016 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 PANTHER PTHR11686 76 626 2.0E-180 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 PANTHER PTHR11686:SF27 76 626 2.0E-180 T 22-04-2016 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 500 515 2.2E-60 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 190 209 2.2E-60 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 172 190 2.2E-60 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 442 460 2.2E-60 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 526 543 2.2E-60 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 320 339 2.2E-60 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 101 126 2.2E-60 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 290 306 2.2E-60 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 464 482 2.2E-60 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 Pfam PF01019 Gamma-glutamyltranspeptidase 94 622 3.8E-143 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 SUPERFAMILY SSF56235 71 626 1.2E-149 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS10550 b12d693f6b4c7bb9cc1b921802a706c4 627 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 80 619 1.7E-108 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 JE55_RS14550 b423886db89989604c7705c7bdbf1342 384 Pfam PF00246 Zinc carboxypeptidase 123 278 8.9E-21 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 JE55_RS14550 b423886db89989604c7705c7bdbf1342 384 PANTHER PTHR12756:SF18 1 312 4.8E-95 T 22-04-2016 JE55_RS14550 b423886db89989604c7705c7bdbf1342 384 SMART SM00631 114 364 1.7E-4 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 JE55_RS14550 b423886db89989604c7705c7bdbf1342 384 PANTHER PTHR12756 1 312 4.8E-95 T 22-04-2016 JE55_RS14550 b423886db89989604c7705c7bdbf1342 384 Gene3D G3DSA:3.40.630.10 104 350 7.6E-37 T 22-04-2016 JE55_RS14550 b423886db89989604c7705c7bdbf1342 384 SUPERFAMILY SSF53187 104 378 3.85E-55 T 22-04-2016 JE55_RS04095 d659f60887454025a5d264915a5f2116 152 SUPERFAMILY SSF88697 4 135 3.48E-15 T 22-04-2016 IPR015947 PUA-like domain JE55_RS05830 7df6c9145a2fd579e5b560d972d3160b 219 SMART SM00947 27 193 3.4E-67 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS05830 7df6c9145a2fd579e5b560d972d3160b 219 Gene3D G3DSA:3.40.1050.10 1 203 5.9E-70 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS05830 7df6c9145a2fd579e5b560d972d3160b 219 PANTHER PTHR11002:SF13 1 208 1.1E-82 T 22-04-2016 JE55_RS05830 7df6c9145a2fd579e5b560d972d3160b 219 SUPERFAMILY SSF53056 1 203 6.93E-65 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS05830 7df6c9145a2fd579e5b560d972d3160b 219 Pfam PF00484 Carbonic anhydrase 34 188 2.0E-50 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS05830 7df6c9145a2fd579e5b560d972d3160b 219 PANTHER PTHR11002 1 208 1.1E-82 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS05830 7df6c9145a2fd579e5b560d972d3160b 219 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS05830 7df6c9145a2fd579e5b560d972d3160b 219 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 JE55_RS01470 f568682c72978d804395599085c4ef31 117 Pfam PF12778 PXPV repeat (3 copies) 33 51 0.0033 T 22-04-2016 IPR024446 PXPV repeat JE55_RS14485 c8f6ee757b3831745c26b0091c56261a 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 104 2.9E-12 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS14485 c8f6ee757b3831745c26b0091c56261a 377 PANTHER PTHR10909:SF341 1 359 3.3E-56 T 22-04-2016 JE55_RS14485 c8f6ee757b3831745c26b0091c56261a 377 SUPERFAMILY SSF56645 1 217 2.75E-40 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 JE55_RS14485 c8f6ee757b3831745c26b0091c56261a 377 Gene3D G3DSA:1.20.140.10 228 365 4.3E-30 T 22-04-2016 JE55_RS14485 c8f6ee757b3831745c26b0091c56261a 377 Gene3D G3DSA:2.40.110.10 122 219 2.8E-13 T 22-04-2016 JE55_RS14485 c8f6ee757b3831745c26b0091c56261a 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 356 8.9E-22 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS14485 c8f6ee757b3831745c26b0091c56261a 377 Gene3D G3DSA:1.10.540.10 1 103 7.6E-17 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 JE55_RS14485 c8f6ee757b3831745c26b0091c56261a 377 SUPERFAMILY SSF47203 227 366 6.44E-32 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 JE55_RS14485 c8f6ee757b3831745c26b0091c56261a 377 PANTHER PTHR10909 1 359 3.3E-56 T 22-04-2016 JE55_RS07675 21ca59cbd14a13440994b90c6b5d2d87 375 Gene3D G3DSA:1.10.443.10 190 373 1.7E-31 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS07675 21ca59cbd14a13440994b90c6b5d2d87 375 PANTHER PTHR30349 325 371 5.3E-27 T 22-04-2016 JE55_RS07675 21ca59cbd14a13440994b90c6b5d2d87 375 PANTHER PTHR30349 202 304 5.3E-27 T 22-04-2016 JE55_RS07675 21ca59cbd14a13440994b90c6b5d2d87 375 PANTHER PTHR30349 96 185 5.3E-27 T 22-04-2016 JE55_RS07675 21ca59cbd14a13440994b90c6b5d2d87 375 PANTHER PTHR30349:SF20 325 371 5.3E-27 T 22-04-2016 JE55_RS07675 21ca59cbd14a13440994b90c6b5d2d87 375 PANTHER PTHR30349:SF20 202 304 5.3E-27 T 22-04-2016 JE55_RS07675 21ca59cbd14a13440994b90c6b5d2d87 375 PANTHER PTHR30349:SF20 96 185 5.3E-27 T 22-04-2016 JE55_RS07675 21ca59cbd14a13440994b90c6b5d2d87 375 Gene3D G3DSA:1.10.150.130 60 159 2.4E-10 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal JE55_RS07675 21ca59cbd14a13440994b90c6b5d2d87 375 SUPERFAMILY SSF56349 60 373 1.62E-44 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 JE55_RS07675 21ca59cbd14a13440994b90c6b5d2d87 375 Pfam PF00589 Phage integrase family 208 366 3.1E-19 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 JE55_RS09355 4697b80982986a343cfc7ba99542aa76 350 Pfam PF01435 Peptidase family M48 146 309 3.6E-18 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 JE55_RS09355 4697b80982986a343cfc7ba99542aa76 350 Gene3D G3DSA:3.30.2010.10 119 206 1.6E-12 T 22-04-2016 JE55_RS09355 4697b80982986a343cfc7ba99542aa76 350 PANTHER PTHR22726 83 329 4.6E-34 T 22-04-2016 JE55_RS22315 3030caad3a312cea813b306b8798e3ef 154 SUPERFAMILY SSF53448 10 151 1.59E-11 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS22315 3030caad3a312cea813b306b8798e3ef 154 Pfam PF00535 Glycosyl transferase family 2 12 98 1.0E-7 T 22-04-2016 IPR001173 Glycosyltransferase 2-like JE55_RS22315 3030caad3a312cea813b306b8798e3ef 154 Gene3D G3DSA:3.90.550.10 12 151 5.5E-11 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS00310 f82cf156ede8a7b2407c8fd7ac994e7f 165 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 134 1.2E-29 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type JE55_RS00310 f82cf156ede8a7b2407c8fd7ac994e7f 165 Gene3D G3DSA:1.10.10.10 1 142 1.3E-43 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00310 f82cf156ede8a7b2407c8fd7ac994e7f 165 SUPERFAMILY SSF46785 2 137 7.91E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00310 f82cf156ede8a7b2407c8fd7ac994e7f 165 PANTHER PTHR33221 2 156 1.2E-54 T 22-04-2016 JE55_RS00310 f82cf156ede8a7b2407c8fd7ac994e7f 165 PANTHER PTHR33221:SF4 2 156 1.2E-54 T 22-04-2016 JE55_RS00310 f82cf156ede8a7b2407c8fd7ac994e7f 165 Pfam PF02082 Transcriptional regulator 1 81 5.5E-21 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type JE55_RS01125 4ab922214077006d043e28390c7b0550 214 Hamap MF_00052_B Ribonuclease HII [rnhB]. 27 206 38.38 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 JE55_RS01125 4ab922214077006d043e28390c7b0550 214 Gene3D G3DSA:3.30.420.10 27 167 8.0E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS01125 4ab922214077006d043e28390c7b0550 214 SUPERFAMILY SSF53098 26 211 6.53E-70 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 JE55_RS01125 4ab922214077006d043e28390c7b0550 214 PANTHER PTHR10954 27 214 2.3E-78 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 JE55_RS01125 4ab922214077006d043e28390c7b0550 214 Pfam PF01351 Ribonuclease HII 29 205 1.0E-42 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain JE55_RS01750 d12a35e4ccbff5fb0bf8425454d4777a 168 Pfam PF13503 Domain of unknown function (DUF4123) 25 144 1.2E-21 T 22-04-2016 IPR025391 Domain of unknown function DUF4123 JE55_RS01115 950d1a4a504a18f7f951291db22c7cb8 271 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 2 270 76.878 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein JE55_RS01115 950d1a4a504a18f7f951291db22c7cb8 271 Pfam PF03618 Kinase/pyrophosphorylase 5 261 1.8E-80 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 JE55_RS01115 950d1a4a504a18f7f951291db22c7cb8 271 PANTHER PTHR31756:SF3 1 271 5.0E-94 T 22-04-2016 JE55_RS01115 950d1a4a504a18f7f951291db22c7cb8 271 PANTHER PTHR31756 1 271 5.0E-94 T 22-04-2016 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 PANTHER PTHR10196:SF9 1 500 3.1E-249 T 22-04-2016 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 SUPERFAMILY SSF53067 5 254 8.91E-98 T 22-04-2016 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 251 3.6E-85 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 PANTHER PTHR10196 1 500 3.1E-249 T 22-04-2016 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 PIRSF PIRSF000538 3 500 7.9E-183 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 Gene3D G3DSA:3.30.420.40 1 252 6.3E-110 T 22-04-2016 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 SUPERFAMILY SSF53067 253 495 1.27E-82 T 22-04-2016 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 449 4.0E-59 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 495 7.3E-224 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 Hamap MF_00186 Glycerol kinase [glpK]. 3 496 58.919 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 JE55_RS11820 4a7a14714134d56e26ff9ed0ae6b8cae 500 Gene3D G3DSA:3.30.420.40 253 497 2.3E-98 T 22-04-2016 JE55_RS08725 1be00d042a29979d0c7ab35e1d1a475d 156 Pfam PF03788 LrgA family 41 131 7.8E-24 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 JE55_RS08725 1be00d042a29979d0c7ab35e1d1a475d 156 PANTHER PTHR33931:SF3 17 156 1.3E-36 T 22-04-2016 JE55_RS08725 1be00d042a29979d0c7ab35e1d1a475d 156 PANTHER PTHR33931 17 156 1.3E-36 T 22-04-2016 JE55_RS02590 a8a6afcdfb6d8e6f9c45c470bedf9714 411 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 111 383 6.3E-68 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 JE55_RS02590 a8a6afcdfb6d8e6f9c45c470bedf9714 411 Pfam PF01458 Uncharacterized protein family (UPF0051) 148 370 2.3E-37 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 JE55_RS02590 a8a6afcdfb6d8e6f9c45c470bedf9714 411 SUPERFAMILY SSF101960 7 372 1.24E-55 T 22-04-2016 JE55_RS02590 a8a6afcdfb6d8e6f9c45c470bedf9714 411 PANTHER PTHR30508:SF0 109 371 5.9E-26 T 22-04-2016 JE55_RS02590 a8a6afcdfb6d8e6f9c45c470bedf9714 411 PANTHER PTHR30508 109 371 5.9E-26 T 22-04-2016 JE55_RS10480 86e0d7ca4c2ac60de0ce80bb75d4ee13 309 PANTHER PTHR36698 2 308 1.9E-42 T 22-04-2016 JE55_RS10480 86e0d7ca4c2ac60de0ce80bb75d4ee13 309 PANTHER PTHR36698:SF2 2 308 1.9E-42 T 22-04-2016 JE55_RS10480 86e0d7ca4c2ac60de0ce80bb75d4ee13 309 Pfam PF02470 MlaD protein 44 113 1.6E-10 T 22-04-2016 IPR003399 Mce/MlaD JE55_RS11665 e27a1444b8c8061b059e4825df068d10 344 SUPERFAMILY SSF56112 10 330 1.22E-45 T 22-04-2016 IPR011009 Protein kinase-like domain JE55_RS11665 e27a1444b8c8061b059e4825df068d10 344 Gene3D G3DSA:3.90.1200.10 109 333 3.4E-71 T 22-04-2016 JE55_RS11665 e27a1444b8c8061b059e4825df068d10 344 Pfam PF01636 Phosphotransferase enzyme family 33 251 2.0E-25 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase JE55_RS11665 e27a1444b8c8061b059e4825df068d10 344 PANTHER PTHR33540 19 338 3.8E-91 T 22-04-2016 JE55_RS11665 e27a1444b8c8061b059e4825df068d10 344 PANTHER PTHR33540:SF1 19 338 3.8E-91 T 22-04-2016 JE55_RS11665 e27a1444b8c8061b059e4825df068d10 344 Gene3D G3DSA:3.30.200.20 11 101 5.5E-28 T 22-04-2016 JE55_RS14280 28be3c28455f2a7d8e7c8fd136a65977 344 PANTHER PTHR12526 1 334 1.3E-73 T 22-04-2016 JE55_RS14280 28be3c28455f2a7d8e7c8fd136a65977 344 Pfam PF13439 Glycosyltransferase Family 4 14 165 1.2E-21 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JE55_RS14280 28be3c28455f2a7d8e7c8fd136a65977 344 PANTHER PTHR12526:SF363 1 334 1.3E-73 T 22-04-2016 JE55_RS14280 28be3c28455f2a7d8e7c8fd136a65977 344 Pfam PF00534 Glycosyl transferases group 1 171 289 2.0E-18 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS14280 28be3c28455f2a7d8e7c8fd136a65977 344 SUPERFAMILY SSF53756 1 328 7.85E-68 T 22-04-2016 JE55_RS14280 28be3c28455f2a7d8e7c8fd136a65977 344 Gene3D G3DSA:3.40.50.2000 176 307 5.8E-18 T 22-04-2016 JE55_RS16325 c1d5670142cb96fe25b7597544861dfb 311 SUPERFAMILY SSF55120 15 244 2.27E-83 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS16325 c1d5670142cb96fe25b7597544861dfb 311 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 15 307 19.57 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS16325 c1d5670142cb96fe25b7597544861dfb 311 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 37 184 5.4E-58 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 JE55_RS16325 c1d5670142cb96fe25b7597544861dfb 311 Gene3D G3DSA:2.30.130.10 245 309 2.6E-13 T 22-04-2016 IPR015947 PUA-like domain JE55_RS16325 c1d5670142cb96fe25b7597544861dfb 311 SUPERFAMILY SSF88697 245 308 6.16E-10 T 22-04-2016 IPR015947 PUA-like domain JE55_RS16325 c1d5670142cb96fe25b7597544861dfb 311 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 16 223 1.5E-82 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS16325 c1d5670142cb96fe25b7597544861dfb 311 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 246 307 1.7E-17 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS16325 c1d5670142cb96fe25b7597544861dfb 311 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 185 242 7.4E-18 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal JE55_RS16325 c1d5670142cb96fe25b7597544861dfb 311 PANTHER PTHR13767 1 307 8.8E-127 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 JE55_RS16325 c1d5670142cb96fe25b7597544861dfb 311 PANTHER PTHR13767:SF2 1 307 8.8E-127 T 22-04-2016 JE55_RS04520 c13cbddab5ae0b7298682722c6f8dd08 274 PANTHER PTHR36920:SF1 1 49 2.3E-17 T 22-04-2016 JE55_RS04520 c13cbddab5ae0b7298682722c6f8dd08 274 PANTHER PTHR36920:SF1 65 178 2.3E-17 T 22-04-2016 JE55_RS04520 c13cbddab5ae0b7298682722c6f8dd08 274 PANTHER PTHR36920:SF1 197 274 2.3E-17 T 22-04-2016 JE55_RS04520 c13cbddab5ae0b7298682722c6f8dd08 274 Gene3D G3DSA:2.40.160.20 20 274 2.0E-60 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS04520 c13cbddab5ae0b7298682722c6f8dd08 274 SUPERFAMILY SSF56925 131 274 5.23E-17 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS04520 c13cbddab5ae0b7298682722c6f8dd08 274 SUPERFAMILY SSF56925 57 103 5.23E-17 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS04520 c13cbddab5ae0b7298682722c6f8dd08 274 Pfam PF03922 OmpW family 63 274 4.7E-20 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 JE55_RS04520 c13cbddab5ae0b7298682722c6f8dd08 274 PANTHER PTHR36920 1 49 2.3E-17 T 22-04-2016 JE55_RS04520 c13cbddab5ae0b7298682722c6f8dd08 274 PANTHER PTHR36920 65 178 2.3E-17 T 22-04-2016 JE55_RS04520 c13cbddab5ae0b7298682722c6f8dd08 274 PANTHER PTHR36920 197 274 2.3E-17 T 22-04-2016 JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 PANTHER PTHR30161 3 699 0.0 T 22-04-2016 JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 Pfam PF00771 FHIPEP family 32 687 8.3E-272 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 243 257 2.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 39 52 2.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 192 209 2.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 76 95 2.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 162 180 2.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 143 159 2.8E-56 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 148 171 - T 22-04-2016 IPR025505 FHIPEP conserved site JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 23 696 3.4E-273 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 PIRSF PIRSF005419 10 700 5.3E-252 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 JE55_RS07895 a9e6a31d950d5019f0c962a299b334b3 700 PANTHER PTHR30161:SF1 3 699 0.0 T 22-04-2016 JE55_RS10355 f976f025d36e4a34b4092c6c0f518ff9 138 PANTHER PTHR33164 10 136 2.0E-16 T 22-04-2016 JE55_RS10355 f976f025d36e4a34b4092c6c0f518ff9 138 Pfam PF12802 MarR family 28 84 3.4E-9 T 22-04-2016 JE55_RS10355 f976f025d36e4a34b4092c6c0f518ff9 138 SMART SM00347 23 122 2.8E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 JE55_RS10355 f976f025d36e4a34b4092c6c0f518ff9 138 Gene3D G3DSA:1.10.10.10 7 131 8.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10355 f976f025d36e4a34b4092c6c0f518ff9 138 SUPERFAMILY SSF46785 7 137 6.92E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13950 b887c46723fa5eddb21b9f1cac94f169 197 Pfam PF13515 Fusaric acid resistance protein-like 59 182 6.3E-15 T 22-04-2016 JE55_RS24605 23917ee5db4e0b0f9e36598fc7fa3f62 511 Pfam PF13604 AAA domain 350 510 1.7E-39 T 22-04-2016 JE55_RS24605 23917ee5db4e0b0f9e36598fc7fa3f62 511 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 1 155 2.6E-46 T 22-04-2016 IPR014059 Conjugative relaxase, N-terminal JE55_RS24605 23917ee5db4e0b0f9e36598fc7fa3f62 511 SUPERFAMILY SSF55464 2 156 3.66E-50 T 22-04-2016 JE55_RS24605 23917ee5db4e0b0f9e36598fc7fa3f62 511 Gene3D G3DSA:3.40.50.300 344 509 4.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS24605 23917ee5db4e0b0f9e36598fc7fa3f62 511 Pfam PF08751 TrwC relaxase 2 151 8.1E-45 T 22-04-2016 IPR014862 TrwC relaxase JE55_RS24605 23917ee5db4e0b0f9e36598fc7fa3f62 511 SUPERFAMILY SSF52540 347 500 1.85E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18115 5c11e600d0f20fb81d1f779edaea2e87 371 Gene3D G3DSA:1.20.1600.10 99 169 1.9E-7 T 22-04-2016 JE55_RS18115 5c11e600d0f20fb81d1f779edaea2e87 371 SUPERFAMILY SSF111369 48 277 1.06E-16 T 22-04-2016 JE55_RS18115 5c11e600d0f20fb81d1f779edaea2e87 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 360 1.9E-66 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 JE55_RS18115 5c11e600d0f20fb81d1f779edaea2e87 371 PANTHER PTHR30469 8 371 7.0E-73 T 22-04-2016 JE55_RS18115 5c11e600d0f20fb81d1f779edaea2e87 371 Gene3D G3DSA:2.40.50.100 64 92 7.9E-12 T 22-04-2016 JE55_RS18115 5c11e600d0f20fb81d1f779edaea2e87 371 Gene3D G3DSA:2.40.50.100 170 198 7.9E-12 T 22-04-2016 JE55_RS18115 5c11e600d0f20fb81d1f779edaea2e87 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 273 5.8E-26 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JE55_RS19185 ec710fc8496a894fc48625d5193f5104 193 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 105 192 2.9E-24 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 JE55_RS19185 ec710fc8496a894fc48625d5193f5104 193 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 155 192 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 JE55_RS19185 ec710fc8496a894fc48625d5193f5104 193 PANTHER PTHR11079 100 193 1.9E-31 T 22-04-2016 JE55_RS19185 ec710fc8496a894fc48625d5193f5104 193 Gene3D G3DSA:3.40.140.10 101 193 1.5E-38 T 22-04-2016 JE55_RS19185 ec710fc8496a894fc48625d5193f5104 193 SUPERFAMILY SSF53927 103 192 2.17E-37 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 JE55_RS07760 3951e93268f0f74ef01a97794df8a31c 87 Pfam PF01527 Transposase 2 70 2.6E-21 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 JE55_RS07760 3951e93268f0f74ef01a97794df8a31c 87 Gene3D G3DSA:1.10.10.60 15 82 4.5E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS07760 3951e93268f0f74ef01a97794df8a31c 87 SUPERFAMILY SSF46689 1 68 4.66E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS07760 3951e93268f0f74ef01a97794df8a31c 87 PANTHER PTHR33609 1 86 6.6E-41 T 22-04-2016 JE55_RS07615 05e116c802b96f8ec9037b2ee984a859 416 Pfam PF11170 Protein of unknown function (DUF2957) 68 413 2.5E-147 T 22-04-2016 IPR021340 Protein of unknown function DUF2957 JE55_RS00385 6f5db2b8ebfb1a9cb37b85ae75fea9a6 298 SUPERFAMILY SSF88713 15 41 4.17E-26 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JE55_RS00385 6f5db2b8ebfb1a9cb37b85ae75fea9a6 298 SUPERFAMILY SSF88713 86 269 4.17E-26 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 JE55_RS00385 6f5db2b8ebfb1a9cb37b85ae75fea9a6 298 Gene3D G3DSA:3.20.20.370 14 38 9.5E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 JE55_RS00385 6f5db2b8ebfb1a9cb37b85ae75fea9a6 298 Gene3D G3DSA:3.20.20.370 86 269 9.5E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 JE55_RS00385 6f5db2b8ebfb1a9cb37b85ae75fea9a6 298 Pfam PF01522 Polysaccharide deacetylase 15 170 3.8E-8 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 JE55_RS14385 5ac996a6e98e91d5fc74282ba478efb8 125 Pfam PF03840 Preprotein translocase SecG subunit 8 76 1.5E-21 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JE55_RS14385 5ac996a6e98e91d5fc74282ba478efb8 125 PRINTS PR01651 Protein-export SecG membrane protein signature 6 26 1.1E-36 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JE55_RS14385 5ac996a6e98e91d5fc74282ba478efb8 125 PRINTS PR01651 Protein-export SecG membrane protein signature 26 40 1.1E-36 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JE55_RS14385 5ac996a6e98e91d5fc74282ba478efb8 125 PRINTS PR01651 Protein-export SecG membrane protein signature 41 57 1.1E-36 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JE55_RS14385 5ac996a6e98e91d5fc74282ba478efb8 125 PRINTS PR01651 Protein-export SecG membrane protein signature 57 79 1.1E-36 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JE55_RS14385 5ac996a6e98e91d5fc74282ba478efb8 125 PANTHER PTHR34182 6 124 3.7E-24 T 22-04-2016 JE55_RS14385 5ac996a6e98e91d5fc74282ba478efb8 125 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 76 4.2E-26 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 JE55_RS01335 b1888f9db81f1f55d5c9b6e39e1af6db 165 Pfam PF00583 Acetyltransferase (GNAT) family 56 128 5.7E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS01335 b1888f9db81f1f55d5c9b6e39e1af6db 165 SUPERFAMILY SSF55729 11 155 4.97E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS01335 b1888f9db81f1f55d5c9b6e39e1af6db 165 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 18 151 2.8E-34 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 JE55_RS01335 b1888f9db81f1f55d5c9b6e39e1af6db 165 PANTHER PTHR23091:SF247 1 155 8.1E-29 T 22-04-2016 JE55_RS01335 b1888f9db81f1f55d5c9b6e39e1af6db 165 Gene3D G3DSA:3.40.630.30 12 155 4.7E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS01335 b1888f9db81f1f55d5c9b6e39e1af6db 165 PANTHER PTHR23091 1 155 8.1E-29 T 22-04-2016 JE55_RS23950 813b4af093219e3feacdf3297d79a14a 219 Pfam PF07042 TrfA protein 27 194 5.8E-13 T 22-04-2016 IPR010751 Plasmid replication initiator protein TrfA JE55_RS08885 a52acbef8850c5eaf6b34bb90056c714 113 SUPERFAMILY SSF46785 10 101 3.9E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08885 a52acbef8850c5eaf6b34bb90056c714 113 PANTHER PTHR33169 1 97 5.2E-29 T 22-04-2016 JE55_RS08885 a52acbef8850c5eaf6b34bb90056c714 113 Pfam PF03551 Transcriptional regulator PadR-like family 14 83 3.4E-21 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal JE55_RS08885 a52acbef8850c5eaf6b34bb90056c714 113 PANTHER PTHR33169:SF1 1 97 5.2E-29 T 22-04-2016 JE55_RS08885 a52acbef8850c5eaf6b34bb90056c714 113 Gene3D G3DSA:1.10.10.10 1 100 7.8E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS00630 bb7f5ae6e6027e599114a0ecae6ed912 143 SUPERFAMILY SSF51316 13 141 9.42E-59 T 22-04-2016 IPR011057 Mss4-like JE55_RS00630 bb7f5ae6e6027e599114a0ecae6ed912 143 PANTHER PTHR10173 5 139 1.0E-64 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 JE55_RS00630 bb7f5ae6e6027e599114a0ecae6ed912 143 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 13 139 37.247 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 JE55_RS00630 bb7f5ae6e6027e599114a0ecae6ed912 143 Gene3D G3DSA:2.170.150.20 10 141 1.9E-62 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 JE55_RS00630 bb7f5ae6e6027e599114a0ecae6ed912 143 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 14 139 2.3E-57 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 JE55_RS00630 bb7f5ae6e6027e599114a0ecae6ed912 143 PANTHER PTHR10173:SF18 5 139 1.0E-64 T 22-04-2016 JE55_RS00630 bb7f5ae6e6027e599114a0ecae6ed912 143 Pfam PF01641 SelR domain 18 137 7.8E-55 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 JE55_RS07320 b2b72cb9f495793e6f671b9553d492b8 101 PANTHER PTHR19836 2 101 1.6E-52 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS07320 b2b72cb9f495793e6f671b9553d492b8 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 27.196 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid JE55_RS07320 b2b72cb9f495793e6f671b9553d492b8 101 SUPERFAMILY SSF57716 2 101 1.35E-36 T 22-04-2016 JE55_RS07320 b2b72cb9f495793e6f671b9553d492b8 101 Gene3D G3DSA:4.10.830.10 41 101 1.3E-28 T 22-04-2016 JE55_RS07320 b2b72cb9f495793e6f671b9553d492b8 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 6.3E-25 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 JE55_RS00925 cde1a1cfa8b98178ae32d47b1497314a 226 PANTHER PTHR31088 2 222 1.2E-32 T 22-04-2016 JE55_RS00925 cde1a1cfa8b98178ae32d47b1497314a 226 Pfam PF04012 PspA/IM30 family 2 220 5.9E-32 T 22-04-2016 IPR007157 PspA/IM30 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 9 559 2.2E-197 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 6 697 1.8E-197 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 SMART SM00836 594 697 3.4E-4 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 Gene3D G3DSA:1.10.3210.10 371 483 7.9E-5 T 22-04-2016 IPR006674 HD domain JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 Gene3D G3DSA:1.10.730.10 591 689 1.5E-5 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 Pfam PF05746 DALR anticodon binding domain 591 689 7.6E-10 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 327 343 3.9E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 55 67 3.9E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 255 270 3.9E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 10 23 3.9E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 403 422 3.9E-33 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 6 697 24.054 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 SUPERFAMILY SSF109604 353 517 5.23E-18 T 22-04-2016 JE55_RS11715 bdd2d54e7290ce686a32afc921b73e19 699 PANTHER PTHR30075 7 699 1.3E-261 T 22-04-2016 JE55_RS09280 ff5835c9a3b0bf80e0193715e3d47e55 261 SUPERFAMILY SSF51621 4 260 3.66E-76 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS09280 ff5835c9a3b0bf80e0193715e3d47e55 261 PANTHER PTHR30502 6 261 2.0E-86 T 22-04-2016 JE55_RS09280 ff5835c9a3b0bf80e0193715e3d47e55 261 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 249 4.3E-52 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 JE55_RS09280 ff5835c9a3b0bf80e0193715e3d47e55 261 PANTHER PTHR30502:SF0 6 261 2.0E-86 T 22-04-2016 JE55_RS09280 ff5835c9a3b0bf80e0193715e3d47e55 261 Gene3D G3DSA:3.20.20.60 4 260 3.0E-80 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 JE55_RS10485 3720a3fe785286f810af7d62da60d59f 212 Gene3D G3DSA:3.40.50.10610 32 206 6.2E-51 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component JE55_RS10485 3720a3fe785286f810af7d62da60d59f 212 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 44 199 8.4E-23 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component JE55_RS10485 3720a3fe785286f810af7d62da60d59f 212 SUPERFAMILY SSF159594 44 203 4.45E-37 T 22-04-2016 JE55_RS01705 3c3c50b4cbc1303fb19e5602dabd4e57 261 SUPERFAMILY SSF51161 2 169 6.38E-53 T 22-04-2016 IPR011004 Trimeric LpxA-like JE55_RS01705 3c3c50b4cbc1303fb19e5602dabd4e57 261 PANTHER PTHR23416:SF55 1 228 3.8E-90 T 22-04-2016 JE55_RS01705 3c3c50b4cbc1303fb19e5602dabd4e57 261 Gene3D G3DSA:2.160.10.10 65 174 7.8E-34 T 22-04-2016 JE55_RS01705 3c3c50b4cbc1303fb19e5602dabd4e57 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 5.0E-6 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS01705 3c3c50b4cbc1303fb19e5602dabd4e57 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 119 151 1.1E-5 T 22-04-2016 IPR001451 Hexapeptide repeat JE55_RS01705 3c3c50b4cbc1303fb19e5602dabd4e57 261 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 167 3.9E-72 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 JE55_RS01705 3c3c50b4cbc1303fb19e5602dabd4e57 261 Gene3D G3DSA:1.10.3130.10 1 64 2.5E-26 T 22-04-2016 JE55_RS01705 3c3c50b4cbc1303fb19e5602dabd4e57 261 PANTHER PTHR23416 1 228 3.8E-90 T 22-04-2016 JE55_RS15330 cf3b187b7f794f07ab3283f4a25a6658 272 Gene3D G3DSA:3.40.630.30 39 238 1.6E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS15330 cf3b187b7f794f07ab3283f4a25a6658 272 PANTHER PTHR37323:SF1 35 267 3.3E-69 T 22-04-2016 JE55_RS15330 cf3b187b7f794f07ab3283f4a25a6658 272 Pfam PF13444 Acetyltransferase (GNAT) domain 53 152 1.3E-33 T 22-04-2016 JE55_RS15330 cf3b187b7f794f07ab3283f4a25a6658 272 SUPERFAMILY SSF55729 34 241 1.56E-46 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS15330 cf3b187b7f794f07ab3283f4a25a6658 272 PANTHER PTHR37323 35 267 3.3E-69 T 22-04-2016 JE55_RS18370 09a9d12c9959c637ccd05da27a5ca586 138 PANTHER PTHR30540 1 138 3.9E-50 T 22-04-2016 JE55_RS18370 09a9d12c9959c637ccd05da27a5ca586 138 Pfam PF02705 K+ potassium transporter 1 136 2.8E-46 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 JE55_RS18370 09a9d12c9959c637ccd05da27a5ca586 138 PANTHER PTHR30540:SF7 1 138 3.9E-50 T 22-04-2016 JE55_RS10640 596a1934dbeaf629b560d5b7bc41ae10 83 Pfam PF04380 Membrane fusogenic activity 4 76 6.0E-29 T 22-04-2016 IPR007475 Membrane fusogenic activity JE55_RS10640 596a1934dbeaf629b560d5b7bc41ae10 83 PANTHER PTHR38040 1 80 3.2E-21 T 22-04-2016 JE55_RS10640 596a1934dbeaf629b560d5b7bc41ae10 83 PANTHER PTHR38040:SF1 1 80 3.2E-21 T 22-04-2016 JE55_RS01855 ee78239f331ce888dab3d612219d3101 226 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 10 225 9.1E-32 T 22-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 JE55_RS01855 ee78239f331ce888dab3d612219d3101 226 Pfam PF04717 Type VI secretion system, phage-baseplate injector 8 118 6.7E-33 T 22-04-2016 IPR006531 Gp5 N-terminal JE55_RS08460 1eb0ee27b2ed238231f56ec37b6c6ea9 377 Pfam PF03600 Citrate transporter 23 311 4.5E-19 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 JE55_RS08460 1eb0ee27b2ed238231f56ec37b6c6ea9 377 PANTHER PTHR10283:SF95 24 377 1.3E-37 T 22-04-2016 JE55_RS08460 1eb0ee27b2ed238231f56ec37b6c6ea9 377 PANTHER PTHR10283 24 377 1.3E-37 T 22-04-2016 JE55_RS12070 8c55fc98e9e35085d995da965ba9fafa 324 PANTHER PTHR30537:SF7 1 311 1.9E-118 T 22-04-2016 JE55_RS12070 8c55fc98e9e35085d995da965ba9fafa 324 SUPERFAMILY SSF53850 90 297 8.87E-43 T 22-04-2016 JE55_RS12070 8c55fc98e9e35085d995da965ba9fafa 324 Pfam PF03466 LysR substrate binding domain 88 293 1.9E-39 T 22-04-2016 IPR005119 LysR, substrate-binding JE55_RS12070 8c55fc98e9e35085d995da965ba9fafa 324 SUPERFAMILY SSF46785 4 80 6.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12070 8c55fc98e9e35085d995da965ba9fafa 324 PANTHER PTHR30537 1 311 1.9E-118 T 22-04-2016 JE55_RS12070 8c55fc98e9e35085d995da965ba9fafa 324 Gene3D G3DSA:1.10.10.10 3 83 2.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12070 8c55fc98e9e35085d995da965ba9fafa 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 JE55_RS12070 8c55fc98e9e35085d995da965ba9fafa 324 Gene3D G3DSA:3.40.190.10 92 190 1.8E-24 T 22-04-2016 JE55_RS15635 2996fe0f9fac7294e0b3ab96f502815c 802 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 42 281 2.6E-12 T 22-04-2016 IPR018712 Domain of unknown function DUF2235 JE55_RS15635 2996fe0f9fac7294e0b3ab96f502815c 802 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 295 408 2.6E-17 T 22-04-2016 IPR018712 Domain of unknown function DUF2235 JE55_RS17615 4124f6ecc2b39839beaba48146ad3aad 151 Gene3D G3DSA:4.10.430.10 90 116 6.4E-4 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 JE55_RS17615 4124f6ecc2b39839beaba48146ad3aad 151 Pfam PF00816 H-NS histone family 39 116 2.6E-18 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 JE55_RS17615 4124f6ecc2b39839beaba48146ad3aad 151 SUPERFAMILY SSF81273 89 125 7.85E-8 T 22-04-2016 JE55_RS20760 21643cab87cb2c126b861219a216b57c 59 SUPERFAMILY SSF101960 5 58 6.93E-6 T 22-04-2016 JE55_RS20760 21643cab87cb2c126b861219a216b57c 59 Pfam PF01458 Uncharacterized protein family (UPF0051) 6 58 5.5E-6 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 JE55_RS04920 3a7f0049b3d75613f659041c0d24b42b 398 Pfam PF05159 Capsule polysaccharide biosynthesis protein 126 358 1.1E-20 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 JE55_RS05430 b84711a580c7187e2399087fe46e8ccf 187 PANTHER PTHR30529 6 184 1.7E-57 T 22-04-2016 JE55_RS05430 b84711a580c7187e2399087fe46e8ccf 187 SUPERFAMILY SSF81342 12 184 1.02E-34 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 JE55_RS05430 b84711a580c7187e2399087fe46e8ccf 187 Pfam PF01292 Prokaryotic cytochrome b561 14 184 4.3E-32 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 JE55_RS05430 b84711a580c7187e2399087fe46e8ccf 187 PANTHER PTHR30529:SF5 6 184 1.7E-57 T 22-04-2016 JE55_RS12120 d7aadc0abe7690943cf5cac5f73f3fe6 50 Pfam PF01527 Transposase 2 39 4.3E-9 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 JE55_RS12120 d7aadc0abe7690943cf5cac5f73f3fe6 50 PANTHER PTHR33609 2 40 2.1E-14 T 22-04-2016 JE55_RS12120 d7aadc0abe7690943cf5cac5f73f3fe6 50 SUPERFAMILY SSF46689 2 41 2.15E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS12120 d7aadc0abe7690943cf5cac5f73f3fe6 50 Gene3D G3DSA:1.10.10.60 3 41 4.9E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 JE55_RS05490 ccfbd190297edc3d43bf36f2f24ef558 228 PANTHER PTHR34580:SF3 1 224 5.4E-38 T 22-04-2016 JE55_RS05490 ccfbd190297edc3d43bf36f2f24ef558 228 Gene3D G3DSA:1.10.10.10 1 62 1.4E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05490 ccfbd190297edc3d43bf36f2f24ef558 228 Pfam PF08279 HTH domain 7 60 2.1E-14 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 JE55_RS05490 ccfbd190297edc3d43bf36f2f24ef558 228 SUPERFAMILY SSF46785 5 61 1.36E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05490 ccfbd190297edc3d43bf36f2f24ef558 228 PANTHER PTHR34580 1 224 5.4E-38 T 22-04-2016 JE55_RS05490 ccfbd190297edc3d43bf36f2f24ef558 228 Pfam PF13280 WYL domain 137 223 5.9E-18 T 22-04-2016 IPR026881 WYL domain JE55_RS08570 9521a9d22d5bf14686c124c0f50d14cf 76 Pfam PF12512 Protein of unknown function (DUF3717) 3 68 1.4E-29 T 22-04-2016 IPR022191 Protein of unknown function DUF3717 JE55_RS14340 c071cd9d29ed4aa4371c86db69bcf1ef 515 Pfam PF00916 Sulfate permease family 12 368 1.4E-47 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 JE55_RS14340 c071cd9d29ed4aa4371c86db69bcf1ef 515 PANTHER PTHR11814 5 488 7.7E-155 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 JE55_RS14340 c071cd9d29ed4aa4371c86db69bcf1ef 515 PANTHER PTHR11814:SF123 5 488 7.7E-155 T 22-04-2016 JE55_RS04780 811b28b1f94d6ed2edf8847025993cdc 129 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 15 125 1.3E-21 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III JE55_RS17070 79286ef4b9cfb9de08a45d47da61eb96 191 Pfam PF09351 Domain of unknown function (DUF1993) 6 175 1.7E-47 T 22-04-2016 IPR018531 Domain of unknown function DUF1993 JE55_RS17070 79286ef4b9cfb9de08a45d47da61eb96 191 PANTHER PTHR36922 8 185 5.7E-32 T 22-04-2016 JE55_RS17070 79286ef4b9cfb9de08a45d47da61eb96 191 Gene3D G3DSA:1.20.120.450 1 175 1.9E-61 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase JE55_RS17070 79286ef4b9cfb9de08a45d47da61eb96 191 SUPERFAMILY SSF109854 4 182 1.19E-47 T 22-04-2016 JE55_RS14920 f8ed91548c8184e71ec2c44efcfdcd02 353 SUPERFAMILY SSF53850 42 342 1.36E-66 T 22-04-2016 JE55_RS14920 f8ed91548c8184e71ec2c44efcfdcd02 353 Gene3D G3DSA:3.40.190.10 283 338 7.4E-32 T 22-04-2016 JE55_RS14920 f8ed91548c8184e71ec2c44efcfdcd02 353 Gene3D G3DSA:3.40.190.10 24 139 7.4E-32 T 22-04-2016 JE55_RS14920 f8ed91548c8184e71ec2c44efcfdcd02 353 PANTHER PTHR30006 1 311 4.5E-54 T 22-04-2016 JE55_RS14920 f8ed91548c8184e71ec2c44efcfdcd02 353 Gene3D G3DSA:3.40.190.10 144 282 3.4E-42 T 22-04-2016 JE55_RS14920 f8ed91548c8184e71ec2c44efcfdcd02 353 Pfam PF13343 Bacterial extracellular solute-binding protein 93 333 1.4E-52 T 22-04-2016 JE55_RS14755 756cd9a0ebec459355a950f17d7b96ed 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 394 556 4.6E-6 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS14755 756cd9a0ebec459355a950f17d7b96ed 570 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 290 3.9E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS14755 756cd9a0ebec459355a950f17d7b96ed 570 PANTHER PTHR30183 19 570 1.7E-152 T 22-04-2016 JE55_RS14755 756cd9a0ebec459355a950f17d7b96ed 570 Gene3D G3DSA:1.10.3720.10 350 561 6.7E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS14755 756cd9a0ebec459355a950f17d7b96ed 570 Gene3D G3DSA:1.10.3720.10 38 293 1.6E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS14755 756cd9a0ebec459355a950f17d7b96ed 570 SUPERFAMILY SSF161098 31 286 2.35E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS14755 756cd9a0ebec459355a950f17d7b96ed 570 SUPERFAMILY SSF161098 306 563 1.01E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS14755 756cd9a0ebec459355a950f17d7b96ed 570 PANTHER PTHR30183:SF2 19 570 1.7E-152 T 22-04-2016 JE55_RS08490 7f1b0253047c35ad3fb38ba00faa317c 594 Gene3D G3DSA:3.40.50.300 344 588 3.3E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08490 7f1b0253047c35ad3fb38ba00faa317c 594 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 2.9E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS08490 7f1b0253047c35ad3fb38ba00faa317c 594 SMART SM00382 371 569 9.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS08490 7f1b0253047c35ad3fb38ba00faa317c 594 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 571 591 4.9E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JE55_RS08490 7f1b0253047c35ad3fb38ba00faa317c 594 PANTHER PTHR24220 348 591 9.2E-115 T 22-04-2016 JE55_RS08490 7f1b0253047c35ad3fb38ba00faa317c 594 SUPERFAMILY SSF52540 346 590 5.14E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08490 7f1b0253047c35ad3fb38ba00faa317c 594 Pfam PF00005 ABC transporter 363 520 1.0E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS08490 7f1b0253047c35ad3fb38ba00faa317c 594 PANTHER PTHR24220:SF525 348 591 9.2E-115 T 22-04-2016 JE55_RS03960 4b6e0a861a4aad29f13989785902be45 270 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 164 265 3.8E-33 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 JE55_RS03960 4b6e0a861a4aad29f13989785902be45 270 SUPERFAMILY SSF63848 162 268 8.63E-34 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 JE55_RS03960 4b6e0a861a4aad29f13989785902be45 270 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 267 6.4E-52 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 JE55_RS03960 4b6e0a861a4aad29f13989785902be45 270 PANTHER PTHR34108 157 268 3.6E-42 T 22-04-2016 JE55_RS03960 4b6e0a861a4aad29f13989785902be45 270 PANTHER PTHR34108 1 125 3.6E-42 T 22-04-2016 JE55_RS03960 4b6e0a861a4aad29f13989785902be45 270 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 8 104 8.5E-10 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 JE55_RS03960 4b6e0a861a4aad29f13989785902be45 270 Gene3D G3DSA:2.160.20.70 151 268 2.2E-41 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 JE55_RS03960 4b6e0a861a4aad29f13989785902be45 270 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 268 26.277 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 JE55_RS03960 4b6e0a861a4aad29f13989785902be45 270 PANTHER PTHR34108:SF1 157 268 3.6E-42 T 22-04-2016 JE55_RS03960 4b6e0a861a4aad29f13989785902be45 270 PANTHER PTHR34108:SF1 1 125 3.6E-42 T 22-04-2016 JE55_RS02820 4991b7e571d9cd96d4cc9d1b2e5431c2 167 PANTHER PTHR23091 30 164 4.4E-27 T 22-04-2016 JE55_RS02820 4991b7e571d9cd96d4cc9d1b2e5431c2 167 Pfam PF13673 Acetyltransferase (GNAT) domain 64 165 3.2E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS02820 4991b7e571d9cd96d4cc9d1b2e5431c2 167 PANTHER PTHR23091:SF275 30 164 4.4E-27 T 22-04-2016 JE55_RS02820 4991b7e571d9cd96d4cc9d1b2e5431c2 167 Gene3D G3DSA:3.40.630.30 21 164 1.1E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS02820 4991b7e571d9cd96d4cc9d1b2e5431c2 167 SUPERFAMILY SSF55729 21 166 4.51E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS11030 09d56255803a8676995a83ea911ddd86 128 SUPERFAMILY SSF54427 6 123 2.86E-25 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS11030 09d56255803a8676995a83ea911ddd86 128 Gene3D G3DSA:3.10.450.50 7 124 2.4E-30 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS11030 09d56255803a8676995a83ea911ddd86 128 Pfam PF14534 Domain of unknown function (DUF4440) 9 116 1.6E-19 T 22-04-2016 IPR027843 Domain of unknown function DUF4440 JE55_RS17140 3b0a7ab011be2ace1a6c519d9a59815a 357 PANTHER PTHR13748:SF10 2 352 2.4E-137 T 22-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 JE55_RS17140 3b0a7ab011be2ace1a6c519d9a59815a 357 Gene3D G3DSA:3.40.50.300 4 233 2.0E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17140 3b0a7ab011be2ace1a6c519d9a59815a 357 TIGRFAM TIGR02475 CobW: cobalamin biosynthesis protein CobW 4 345 2.2E-144 T 22-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 JE55_RS17140 3b0a7ab011be2ace1a6c519d9a59815a 357 SUPERFAMILY SSF52540 4 248 9.9E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS17140 3b0a7ab011be2ace1a6c519d9a59815a 357 PANTHER PTHR13748 2 352 2.4E-137 T 22-04-2016 JE55_RS17140 3b0a7ab011be2ace1a6c519d9a59815a 357 SMART SM00833 259 350 0.001 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS17140 3b0a7ab011be2ace1a6c519d9a59815a 357 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 215 9.2E-56 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JE55_RS17140 3b0a7ab011be2ace1a6c519d9a59815a 357 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 350 2.3E-16 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS17140 3b0a7ab011be2ace1a6c519d9a59815a 357 Gene3D G3DSA:3.30.1220.10 242 351 4.4E-29 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS17140 3b0a7ab011be2ace1a6c519d9a59815a 357 SUPERFAMILY SSF90002 267 350 2.88E-18 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JE55_RS09850 d80b176b5f54715418990a1c157cc65d 246 PANTHER PTHR37314 5 229 1.1E-42 T 22-04-2016 JE55_RS09850 d80b176b5f54715418990a1c157cc65d 246 Pfam PF06912 Protein of unknown function (DUF1275) 13 212 4.0E-32 T 22-04-2016 IPR010699 Protein of unknown function DUF1275 JE55_RS09850 d80b176b5f54715418990a1c157cc65d 246 PANTHER PTHR37314:SF2 5 229 1.1E-42 T 22-04-2016 JE55_RS04835 62d9196713914c5b09deaecaa8bea11b 225 PANTHER PTHR30625:SF3 1 225 5.5E-67 T 22-04-2016 JE55_RS04835 62d9196713914c5b09deaecaa8bea11b 225 PANTHER PTHR30625 1 225 5.5E-67 T 22-04-2016 JE55_RS04835 62d9196713914c5b09deaecaa8bea11b 225 TIGRFAM TIGR02796 tolQ: protein TolQ 8 222 1.4E-87 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 JE55_RS04835 62d9196713914c5b09deaecaa8bea11b 225 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 210 2.7E-41 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 JE55_RS01055 a9a739803f76c312f600ee98327e7756 406 Gene3D G3DSA:1.25.40.10 28 130 3.7E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS01055 a9a739803f76c312f600ee98327e7756 406 Gene3D G3DSA:1.10.10.10 334 373 2.0E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS01055 a9a739803f76c312f600ee98327e7756 406 SUPERFAMILY SSF46785 331 385 9.3E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08095 9be49e7c4e1c6c5c3865552413472b86 553 Pfam PF04185 Phosphoesterase family 60 522 1.2E-123 T 22-04-2016 IPR007312 Phosphoesterase GO:0016788 JE55_RS08095 9be49e7c4e1c6c5c3865552413472b86 553 TIGRFAM TIGR03397 acid_phos_Burk: acid phosphatase, Burkholderia-type 60 552 1.3E-264 T 22-04-2016 IPR017768 Acid phosphatase, AcpA JE55_RS08095 9be49e7c4e1c6c5c3865552413472b86 553 PANTHER PTHR31956 331 516 5.3E-24 T 22-04-2016 JE55_RS08095 9be49e7c4e1c6c5c3865552413472b86 553 Gene3D G3DSA:3.40.720.10 370 521 5.0E-5 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 JE55_RS08095 9be49e7c4e1c6c5c3865552413472b86 553 PANTHER PTHR31956:SF12 331 516 5.3E-24 T 22-04-2016 JE55_RS08095 9be49e7c4e1c6c5c3865552413472b86 553 PANTHER PTHR31956:SF12 183 252 5.3E-24 T 22-04-2016 JE55_RS08095 9be49e7c4e1c6c5c3865552413472b86 553 PANTHER PTHR31956 183 252 5.3E-24 T 22-04-2016 JE55_RS08095 9be49e7c4e1c6c5c3865552413472b86 553 SUPERFAMILY SSF53649 188 247 1.7E-24 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 JE55_RS08095 9be49e7c4e1c6c5c3865552413472b86 553 SUPERFAMILY SSF53649 319 513 1.7E-24 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 JE55_RS11000 2ca0409a744826bb5759bb8fa20e3583 378 PANTHER PTHR30365 1 378 4.9E-161 T 22-04-2016 JE55_RS11000 2ca0409a744826bb5759bb8fa20e3583 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 360 4.1E-105 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 JE55_RS11000 2ca0409a744826bb5759bb8fa20e3583 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 7.6E-148 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 JE55_RS11000 2ca0409a744826bb5759bb8fa20e3583 378 PIRSF PIRSF000267 1 377 2.0E-122 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 JE55_RS11000 2ca0409a744826bb5759bb8fa20e3583 378 PANTHER PTHR30365:SF6 1 378 4.9E-161 T 22-04-2016 JE55_RS08205 9098ee9efad443388281e4bbeb300ac8 244 Gene3D G3DSA:3.40.50.1110 43 229 6.8E-23 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS08205 9098ee9efad443388281e4bbeb300ac8 244 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 49 215 1.8E-18 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS08205 9098ee9efad443388281e4bbeb300ac8 244 SUPERFAMILY SSF52266 43 231 5.95E-34 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain JE55_RS08205 9098ee9efad443388281e4bbeb300ac8 244 PANTHER PTHR30383 44 232 9.3E-13 T 22-04-2016 JE55_RS08205 9098ee9efad443388281e4bbeb300ac8 244 PANTHER PTHR30383:SF5 44 232 9.3E-13 T 22-04-2016 JE55_RS09065 3e733604fc71adce33608b3cf76f1313 385 Pfam PF14321 Domain of unknown function (DUF4382) 31 182 5.6E-38 T 22-04-2016 IPR025491 Domain of unknown function DUF4382 JE55_RS10705 4003f0169c41ce61451c237a8dd97a04 159 Gene3D G3DSA:3.10.420.10 4 149 2.8E-60 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JE55_RS10705 4003f0169c41ce61451c237a8dd97a04 159 Pfam PF02556 Preprotein translocase subunit SecB 5 142 8.3E-55 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JE55_RS10705 4003f0169c41ce61451c237a8dd97a04 159 Hamap MF_00821 Protein-export protein SecB [secB]. 1 144 32.31 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JE55_RS10705 4003f0169c41ce61451c237a8dd97a04 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 122 140 1.3E-30 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JE55_RS10705 4003f0169c41ce61451c237a8dd97a04 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 96 118 1.3E-30 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JE55_RS10705 4003f0169c41ce61451c237a8dd97a04 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 12 29 1.3E-30 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JE55_RS10705 4003f0169c41ce61451c237a8dd97a04 159 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 72 92 1.3E-30 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JE55_RS10705 4003f0169c41ce61451c237a8dd97a04 159 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 139 3.8E-47 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JE55_RS10705 4003f0169c41ce61451c237a8dd97a04 159 PANTHER PTHR36918 3 159 7.4E-54 T 22-04-2016 JE55_RS10705 4003f0169c41ce61451c237a8dd97a04 159 SUPERFAMILY SSF54611 3 140 3.27E-49 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 JE55_RS10705 4003f0169c41ce61451c237a8dd97a04 159 PANTHER PTHR36918:SF1 3 159 7.4E-54 T 22-04-2016 JE55_RS05225 ffcc6d96b77472af13743dea28343319 275 PANTHER PTHR23088 1 272 1.1E-99 T 22-04-2016 JE55_RS05225 ffcc6d96b77472af13743dea28343319 275 SUPERFAMILY SSF56317 9 272 9.68E-83 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS05225 ffcc6d96b77472af13743dea28343319 275 PANTHER PTHR23088:SF27 1 272 1.1E-99 T 22-04-2016 JE55_RS05225 ffcc6d96b77472af13743dea28343319 275 Pfam PF00795 Carbon-nitrogen hydrolase 13 264 3.8E-54 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS05225 ffcc6d96b77472af13743dea28343319 275 Gene3D G3DSA:3.60.110.10 6 272 5.4E-87 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 JE55_RS06095 1410826e7baecb22f4613118a59ade24 195 Pfam PF08750 CNP1-like family 50 185 3.9E-52 T 22-04-2016 IPR014861 Uncharacterised domain CNP1 JE55_RS05320 715789248409e5d86e13b01daa7e032e 406 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 3 373 2.8E-159 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 JE55_RS05320 715789248409e5d86e13b01daa7e032e 406 PIRSF PIRSF007313 2 386 3.6E-155 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 JE55_RS14130 bef54355e48e3a3a7cb3c4b1a9b19919 154 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 23.355 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JE55_RS14130 bef54355e48e3a3a7cb3c4b1a9b19919 154 PANTHER PTHR21043 1 106 3.8E-34 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JE55_RS14130 bef54355e48e3a3a7cb3c4b1a9b19919 154 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 1.9E-33 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JE55_RS14130 bef54355e48e3a3a7cb3c4b1a9b19919 154 Gene3D G3DSA:3.30.460.10 2 107 1.2E-37 T 22-04-2016 JE55_RS14130 bef54355e48e3a3a7cb3c4b1a9b19919 154 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 2.2E-25 T 22-04-2016 JE55_RS14130 bef54355e48e3a3a7cb3c4b1a9b19919 154 SUPERFAMILY SSF81301 1 109 6.87E-36 T 22-04-2016 JE55_RS06825 3241cef4ea1bef32d4e2deb8f3c0e17d 353 Pfam PF01661 Macro domain 18 129 4.3E-23 T 22-04-2016 IPR002589 Macro domain JE55_RS06825 3241cef4ea1bef32d4e2deb8f3c0e17d 353 Gene3D G3DSA:3.40.220.10 2 127 3.5E-11 T 22-04-2016 JE55_RS06825 3241cef4ea1bef32d4e2deb8f3c0e17d 353 SMART SM00506 1 132 1.3E-26 T 22-04-2016 IPR002589 Macro domain JE55_RS06825 3241cef4ea1bef32d4e2deb8f3c0e17d 353 PANTHER PTHR12521 1 189 7.2E-58 T 22-04-2016 JE55_RS06825 3241cef4ea1bef32d4e2deb8f3c0e17d 353 SUPERFAMILY SSF52949 1 148 1.58E-44 T 22-04-2016 JE55_RS02525 f8c9eb7b1c8ee28cfd99c5aaf8022eb2 239 PANTHER PTHR30352 13 193 1.4E-23 T 22-04-2016 JE55_RS02525 f8c9eb7b1c8ee28cfd99c5aaf8022eb2 239 SUPERFAMILY SSF102114 25 204 1.11E-20 T 22-04-2016 JE55_RS02525 f8c9eb7b1c8ee28cfd99c5aaf8022eb2 239 Pfam PF04055 Radical SAM superfamily 31 162 1.7E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 JE55_RS02525 f8c9eb7b1c8ee28cfd99c5aaf8022eb2 239 PANTHER PTHR30352:SF4 13 193 1.4E-23 T 22-04-2016 JE55_RS02525 f8c9eb7b1c8ee28cfd99c5aaf8022eb2 239 Pfam PF13353 4Fe-4S single cluster domain 26 145 1.2E-8 T 22-04-2016 JE55_RS02525 f8c9eb7b1c8ee28cfd99c5aaf8022eb2 239 Gene3D G3DSA:3.20.20.70 30 201 3.9E-18 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 JE55_RS02525 f8c9eb7b1c8ee28cfd99c5aaf8022eb2 239 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 13 201 3.8E-58 T 22-04-2016 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein JE55_RS14605 5f3a5ff921b41365da921341eb11471f 357 Pfam PF00487 Fatty acid desaturase 66 340 6.0E-17 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 JE55_RS06940 fabf01d36e1f04e84591ff182c8627d3 260 PANTHER PTHR30371 1 254 8.8E-102 T 22-04-2016 JE55_RS06940 fabf01d36e1f04e84591ff182c8627d3 260 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 12 251 18.593 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JE55_RS06940 fabf01d36e1f04e84591ff182c8627d3 260 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 17 234 4.6E-70 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JE55_RS06940 fabf01d36e1f04e84591ff182c8627d3 260 PANTHER PTHR30371:SF0 1 254 8.8E-102 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JE55_RS06940 fabf01d36e1f04e84591ff182c8627d3 260 Pfam PF00902 Sec-independent protein translocase protein (TatC) 19 229 1.7E-67 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JE55_RS06940 fabf01d36e1f04e84591ff182c8627d3 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 162 190 1.9E-46 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JE55_RS06940 fabf01d36e1f04e84591ff182c8627d3 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 15 42 1.9E-46 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JE55_RS06940 fabf01d36e1f04e84591ff182c8627d3 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 92 110 1.9E-46 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JE55_RS06940 fabf01d36e1f04e84591ff182c8627d3 260 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 110 136 1.9E-46 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 JE55_RS01075 49c4d7d5853925e2cd56922ce3507372 145 Gene3D G3DSA:3.30.530.20 1 144 2.9E-47 T 22-04-2016 IPR023393 START-like domain JE55_RS01075 49c4d7d5853925e2cd56922ce3507372 145 PANTHER PTHR12901:SF7 1 144 1.1E-49 T 22-04-2016 JE55_RS01075 49c4d7d5853925e2cd56922ce3507372 145 SUPERFAMILY SSF55961 1 143 2.84E-36 T 22-04-2016 JE55_RS01075 49c4d7d5853925e2cd56922ce3507372 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 11 134 3.4E-30 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain JE55_RS01075 49c4d7d5853925e2cd56922ce3507372 145 PANTHER PTHR12901 1 144 1.1E-49 T 22-04-2016 JE55_RS22500 9e6c33f8b68cc78dd2dec1e987f9a381 82 Gene3D G3DSA:1.10.10.10 4 82 3.5E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS22500 9e6c33f8b68cc78dd2dec1e987f9a381 82 PANTHER PTHR33204 2 82 3.3E-33 T 22-04-2016 JE55_RS22500 9e6c33f8b68cc78dd2dec1e987f9a381 82 Pfam PF01638 HxlR-like helix-turn-helix 23 81 4.2E-16 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type JE55_RS22500 9e6c33f8b68cc78dd2dec1e987f9a381 82 PANTHER PTHR33204:SF7 2 82 3.3E-33 T 22-04-2016 JE55_RS22500 9e6c33f8b68cc78dd2dec1e987f9a381 82 SUPERFAMILY SSF46785 8 81 3.24E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS07440 eb1b33953e36ae388bfc73db2fc93bad 165 PANTHER PTHR11560 3 160 1.1E-46 T 22-04-2016 JE55_RS07440 eb1b33953e36ae388bfc73db2fc93bad 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 27.145 T 22-04-2016 IPR022973 Ribosomal protein L10 JE55_RS07440 eb1b33953e36ae388bfc73db2fc93bad 165 SUPERFAMILY SSF160369 4 159 7.59E-50 T 22-04-2016 JE55_RS07440 eb1b33953e36ae388bfc73db2fc93bad 165 Pfam PF00466 Ribosomal protein L10 4 100 9.2E-23 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 JE55_RS13755 4366f72fb559c67916f2849ae9beaad5 200 SUPERFAMILY SSF64288 7 184 1.7E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS13755 4366f72fb559c67916f2849ae9beaad5 200 Pfam PF04345 Chorismate lyase 22 184 9.2E-21 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 JE55_RS13755 4366f72fb559c67916f2849ae9beaad5 200 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 11 185 24.3 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 JE55_RS13755 4366f72fb559c67916f2849ae9beaad5 200 Gene3D G3DSA:3.40.1410.10 6 183 1.3E-49 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain JE55_RS13755 4366f72fb559c67916f2849ae9beaad5 200 PANTHER PTHR38683 26 191 1.5E-23 T 22-04-2016 JE55_RS26030 58aa7cd01cb32bee6eb1955f1e711f43 97 Gene3D G3DSA:1.10.287.130 2 51 1.5E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS26030 58aa7cd01cb32bee6eb1955f1e711f43 97 SUPERFAMILY SSF47384 1 55 9.81E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS26030 58aa7cd01cb32bee6eb1955f1e711f43 97 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1 55 4.0E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 JE55_RS12410 9128c3edc41846159068a55ed6974b47 286 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS12410 9128c3edc41846159068a55ed6974b47 286 SUPERFAMILY SSF52540 3 227 2.98E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12410 9128c3edc41846159068a55ed6974b47 286 PANTHER PTHR24220 5 234 2.7E-64 T 22-04-2016 JE55_RS12410 9128c3edc41846159068a55ed6974b47 286 SMART SM00382 28 214 2.9E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS12410 9128c3edc41846159068a55ed6974b47 286 Gene3D G3DSA:3.40.50.300 3 231 6.4E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12410 9128c3edc41846159068a55ed6974b47 286 Pfam PF00005 ABC transporter 19 164 1.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS11425 e6dcc1259c377ed22f1e13e8366654a3 362 Pfam PF08893 Domain of unknown function (DUF1839) 26 334 1.3E-140 T 22-04-2016 IPR014989 Protein of unknown function DUF1839 JE55_RS08440 6e41b10dbed6244babcc0b9f9495dfa2 156 PANTHER PTHR33445 1 156 2.2E-37 T 22-04-2016 JE55_RS08440 6e41b10dbed6244babcc0b9f9495dfa2 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.453 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 JE55_RS08440 6e41b10dbed6244babcc0b9f9495dfa2 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 7.8E-30 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 JE55_RS08440 6e41b10dbed6244babcc0b9f9495dfa2 156 Gene3D G3DSA:1.20.5.620 63 121 5.1E-12 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain JE55_RS08440 6e41b10dbed6244babcc0b9f9495dfa2 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 4.0E-42 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 JE55_RS08440 6e41b10dbed6244babcc0b9f9495dfa2 156 SUPERFAMILY SSF81573 63 121 2.62E-10 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain JE55_RS10025 0abab1fce38807d05d6bfcd67f49f999 396 SUPERFAMILY SSF53335 27 386 4.08E-93 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS10025 0abab1fce38807d05d6bfcd67f49f999 396 Gene3D G3DSA:3.40.50.150 88 181 2.5E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS10025 0abab1fce38807d05d6bfcd67f49f999 396 Gene3D G3DSA:3.40.50.150 233 287 2.5E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JE55_RS10025 0abab1fce38807d05d6bfcd67f49f999 396 PANTHER PTHR12049 12 376 1.2E-52 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA JE55_RS10025 0abab1fce38807d05d6bfcd67f49f999 396 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 98 324 1.2E-49 T 22-04-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA JE55_RS01020 4a032f6492b0ad887677ad290335c386 133 PANTHER PTHR39158 1 119 7.4E-17 T 22-04-2016 JE55_RS01020 4a032f6492b0ad887677ad290335c386 133 Pfam PF09350 Domain of unknown function (DUF1992) 7 74 4.7E-22 T 22-04-2016 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain JE55_RS30160 cf7b38c1b701033d188612a7e19ef7a3 153 PANTHER PTHR33969:SF2 1 153 1.2E-32 T 22-04-2016 JE55_RS30160 cf7b38c1b701033d188612a7e19ef7a3 153 PANTHER PTHR33969 1 153 1.2E-32 T 22-04-2016 JE55_RS30160 cf7b38c1b701033d188612a7e19ef7a3 153 Pfam PF02616 Segregation and condensation protein ScpA 1 147 5.5E-20 T 22-04-2016 IPR003768 Segregation and condensation protein A JE55_RS05875 9d191ce82de153a864cfc6d47d352dcb 187 Gene3D G3DSA:3.30.370.10 87 181 5.2E-31 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) JE55_RS05875 9d191ce82de153a864cfc6d47d352dcb 187 SUPERFAMILY SSF52038 88 180 3.53E-23 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) JE55_RS05875 9d191ce82de153a864cfc6d47d352dcb 187 Pfam PF01337 Barstar (barnase inhibitor) 94 176 9.7E-25 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) JE55_RS05980 b639b1857818b53a44741f88c83d4644 189 SUPERFAMILY SSF53474 1 187 2.34E-21 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS05980 b639b1857818b53a44741f88c83d4644 189 Pfam PF05728 Uncharacterised protein family (UPF0227) 2 186 1.2E-60 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA JE55_RS05980 b639b1857818b53a44741f88c83d4644 189 PANTHER PTHR35602 1 185 7.4E-57 T 22-04-2016 JE55_RS05980 b639b1857818b53a44741f88c83d4644 189 Gene3D G3DSA:3.40.50.1820 1 184 8.7E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS05980 b639b1857818b53a44741f88c83d4644 189 PANTHER PTHR35602:SF3 1 185 7.4E-57 T 22-04-2016 JE55_RS09765 6781da806428613f9da89bbd5fe52ff1 141 Pfam PF00460 Flagella basal body rod protein 8 38 1.3E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 JE55_RS09765 6781da806428613f9da89bbd5fe52ff1 141 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site JE55_RS09765 6781da806428613f9da89bbd5fe52ff1 141 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 140 1.3E-53 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 JE55_RS09765 6781da806428613f9da89bbd5fe52ff1 141 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 137 3.1E-14 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JE55_RS09765 6781da806428613f9da89bbd5fe52ff1 141 PANTHER PTHR30435 1 141 7.2E-63 T 22-04-2016 JE55_RS09765 6781da806428613f9da89bbd5fe52ff1 141 PANTHER PTHR30435:SF2 1 141 7.2E-63 T 22-04-2016 JE55_RS06765 7576a98fec680593d52d565b7208f939 160 Pfam PF04965 Gene 25-like lysozyme 32 132 1.3E-22 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD JE55_RS06765 7576a98fec680593d52d565b7208f939 160 Gene3D G3DSA:3.10.450.40 87 144 7.2E-6 T 22-04-2016 JE55_RS06765 7576a98fec680593d52d565b7208f939 160 SUPERFAMILY SSF160719 32 145 4.05E-11 T 22-04-2016 JE55_RS06765 7576a98fec680593d52d565b7208f939 160 PANTHER PTHR38595 1 160 4.0E-19 T 22-04-2016 JE55_RS06765 7576a98fec680593d52d565b7208f939 160 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 152 5.5E-36 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein JE55_RS03305 f72a3d7e325ae46b86381fdd29506167 159 PIRSF PIRSF003174 1 159 3.9E-59 T 22-04-2016 IPR010292 Uncharacterised protein family CreA JE55_RS03305 f72a3d7e325ae46b86381fdd29506167 159 PANTHER PTHR37952 3 150 1.8E-52 T 22-04-2016 JE55_RS03305 f72a3d7e325ae46b86381fdd29506167 159 Pfam PF05981 CreA protein 27 151 9.2E-52 T 22-04-2016 IPR010292 Uncharacterised protein family CreA JE55_RS03305 f72a3d7e325ae46b86381fdd29506167 159 PANTHER PTHR37952:SF2 3 150 1.8E-52 T 22-04-2016 JE55_RS16760 862b16180618a53c55ff884f95dd66ae 297 PANTHER PTHR30406 7 279 8.5E-159 T 22-04-2016 JE55_RS16760 862b16180618a53c55ff884f95dd66ae 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 277 2.1E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16760 862b16180618a53c55ff884f95dd66ae 297 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 270 2.3E-97 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 JE55_RS16760 862b16180618a53c55ff884f95dd66ae 297 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 12 274 2.4E-128 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 JE55_RS16760 862b16180618a53c55ff884f95dd66ae 297 Gene3D G3DSA:1.10.3720.10 20 275 1.9E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS16760 862b16180618a53c55ff884f95dd66ae 297 PANTHER PTHR30406:SF6 7 279 8.5E-159 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 JE55_RS16760 862b16180618a53c55ff884f95dd66ae 297 SUPERFAMILY SSF161098 18 267 4.02E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS08455 30f3107a16e1731e8458b6fd8ef738c5 176 Pfam PF03899 ATP synthase I chain 69 163 7.2E-16 T 22-04-2016 IPR005598 ATP synthase protein I JE55_RS12620 d1f979296047fee3967c978fe38d646e 155 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 69 151 7.5E-25 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 JE55_RS12620 d1f979296047fee3967c978fe38d646e 155 PANTHER PTHR10815:SF5 1 154 1.5E-43 T 22-04-2016 JE55_RS12620 d1f979296047fee3967c978fe38d646e 155 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 117 123 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 JE55_RS12620 d1f979296047fee3967c978fe38d646e 155 SUPERFAMILY SSF53155 2 74 1.96E-11 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 JE55_RS12620 d1f979296047fee3967c978fe38d646e 155 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 70 153 6.2E-29 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 JE55_RS12620 d1f979296047fee3967c978fe38d646e 155 PANTHER PTHR10815 1 154 1.5E-43 T 22-04-2016 JE55_RS12620 d1f979296047fee3967c978fe38d646e 155 Gene3D G3DSA:1.10.10.10 68 154 5.5E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12620 d1f979296047fee3967c978fe38d646e 155 SUPERFAMILY SSF46767 68 153 4.45E-27 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 JE55_RS23160 3a6718632f13531c7e548596e67918e5 355 Pfam PF13116 Protein of unknown function 85 343 1.3E-42 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 JE55_RS23160 3a6718632f13531c7e548596e67918e5 355 PANTHER PTHR38690 44 346 8.4E-22 T 22-04-2016 JE55_RS15515 518a56c5ed46c1c606c9a3a55b61f397 71 Pfam PF13127 Protein of unknown function (DUF3955) 9 53 1.2E-12 T 22-04-2016 IPR025016 Protein of unknown function DUF3955 JE55_RS10385 91685104d114a13174c3c5155fc6024c 107 Pfam PF08895 Domain of unknown function (DUF1840) 1 105 1.1E-27 T 22-04-2016 IPR014991 Protein of unknown function DUF1840 JE55_RS11660 6da728c8d5ee66e4da14190cde259044 239 PANTHER PTHR22572 7 125 1.2E-35 T 22-04-2016 JE55_RS11660 6da728c8d5ee66e4da14190cde259044 239 Gene3D G3DSA:3.90.550.10 7 236 1.2E-42 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS11660 6da728c8d5ee66e4da14190cde259044 239 SUPERFAMILY SSF53448 7 235 9.91E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS11660 6da728c8d5ee66e4da14190cde259044 239 Pfam PF00483 Nucleotidyl transferase 8 135 1.8E-20 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 JE55_RS11660 6da728c8d5ee66e4da14190cde259044 239 PANTHER PTHR22572:SF15 7 125 1.2E-35 T 22-04-2016 JE55_RS12340 0de23e6e6dc2404296e185cc9b723acf 140 Gene3D G3DSA:2.60.40.1120 70 135 2.0E-8 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain JE55_RS12340 0de23e6e6dc2404296e185cc9b723acf 140 Pfam PF13620 Carboxypeptidase regulatory-like domain 68 132 1.5E-8 T 22-04-2016 JE55_RS12340 0de23e6e6dc2404296e185cc9b723acf 140 SUPERFAMILY SSF49452 64 137 1.67E-8 T 22-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 JE55_RS02860 4f2846a97822df1a94f81d71aa6575bf 295 Gene3D G3DSA:3.40.190.10 5 119 6.8E-5 T 22-04-2016 JE55_RS02070 334a99f482a75655d96183599b88a9d7 143 Pfam PF04977 Septum formation initiator 11 89 1.8E-22 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 JE55_RS02070 334a99f482a75655d96183599b88a9d7 143 PANTHER PTHR37485:SF1 2 106 3.7E-34 T 22-04-2016 JE55_RS02070 334a99f482a75655d96183599b88a9d7 143 PANTHER PTHR37485 2 106 3.7E-34 T 22-04-2016 JE55_RS02070 334a99f482a75655d96183599b88a9d7 143 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 32.037 T 22-04-2016 IPR023081 Cell division protein FtsB JE55_RS12965 bcb469a77ba3f07cdc90f3bcb446bac9 238 Pfam PF00005 ABC transporter 22 166 3.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS12965 bcb469a77ba3f07cdc90f3bcb446bac9 238 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS12965 bcb469a77ba3f07cdc90f3bcb446bac9 238 PANTHER PTHR24220:SF568 7 238 9.4E-125 T 22-04-2016 JE55_RS12965 bcb469a77ba3f07cdc90f3bcb446bac9 238 SMART SM00382 30 217 3.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS12965 bcb469a77ba3f07cdc90f3bcb446bac9 238 Gene3D G3DSA:3.40.50.300 4 235 7.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS12965 bcb469a77ba3f07cdc90f3bcb446bac9 238 PIRSF PIRSF039137 1 238 6.6E-110 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 JE55_RS12965 bcb469a77ba3f07cdc90f3bcb446bac9 238 PANTHER PTHR24220 7 238 9.4E-125 T 22-04-2016 JE55_RS12965 bcb469a77ba3f07cdc90f3bcb446bac9 238 SUPERFAMILY SSF52540 4 237 1.93E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS00570 a40a388d6857707fd18dcd003ee45776 283 PANTHER PTHR17985 2 242 2.2E-66 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 JE55_RS00570 a40a388d6857707fd18dcd003ee45776 283 Pfam PF05742 Transport and Golgi organisation 2 1 241 2.7E-55 T 22-04-2016 IPR008551 Transport and Golgi organisation protein 2 JE55_RS12135 ed2c06b117a632dfcb1c27af1135edf3 163 SUPERFAMILY SSF88723 1 133 1.79E-6 T 22-04-2016 IPR029060 PIN domain-like JE55_RS15570 d6c28640f84a7133b73aa056f12603d8 186 SUPERFAMILY SSF52833 31 183 1.36E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS15570 d6c28640f84a7133b73aa056f12603d8 186 Gene3D G3DSA:3.40.30.10 28 181 7.7E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold JE55_RS15570 d6c28640f84a7133b73aa056f12603d8 186 Pfam PF02630 SCO1/SenC 51 117 3.1E-7 T 22-04-2016 IPR003782 Copper chaperone SCO1/SenC JE55_RS16870 9050cdf9b45cafff256fb2ebd465ec36 137 Pfam PF09476 Pilus biogenesis CpaD protein (pilus_cpaD) 12 119 3.3E-10 T 22-04-2016 IPR019027 Pilus biogenesis CpaD-related JE55_RS16835 9553b95043075a378e04270b88f23bf5 119 Pfam PF01391 Collagen triple helix repeat (20 copies) 4 54 4.5E-9 T 22-04-2016 IPR008160 Collagen triple helix repeat JE55_RS13925 93b191021eb3f69f1065d8b450bbd7e6 432 Pfam PF04932 O-Antigen ligase 183 354 2.2E-9 T 22-04-2016 IPR007016 O-antigen ligase-related JE55_RS14925 ba9b7f4d7c20d58af2cb72196c128074 341 SUPERFAMILY SSF47413 2 60 5.98E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS14925 ba9b7f4d7c20d58af2cb72196c128074 341 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 311 2.6E-31 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain JE55_RS14925 ba9b7f4d7c20d58af2cb72196c128074 341 PANTHER PTHR30146 1 340 1.3E-89 T 22-04-2016 JE55_RS14925 ba9b7f4d7c20d58af2cb72196c128074 341 Gene3D G3DSA:3.40.50.2300 62 168 3.8E-34 T 22-04-2016 JE55_RS14925 ba9b7f4d7c20d58af2cb72196c128074 341 SUPERFAMILY SSF53822 59 319 4.71E-66 T 22-04-2016 IPR028082 Periplasmic binding protein-like I JE55_RS14925 ba9b7f4d7c20d58af2cb72196c128074 341 Gene3D G3DSA:3.40.50.2300 169 330 9.7E-45 T 22-04-2016 JE55_RS14925 ba9b7f4d7c20d58af2cb72196c128074 341 Gene3D G3DSA:1.10.260.40 3 61 5.2E-21 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS14925 ba9b7f4d7c20d58af2cb72196c128074 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 9.3E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS14925 ba9b7f4d7c20d58af2cb72196c128074 341 SMART SM00354 2 72 4.0E-23 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 JE55_RS11630 d26ce378ba51180ab0d1e1e978041bbe 254 SUPERFAMILY SSF52096 3 252 1.62E-75 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS11630 d26ce378ba51180ab0d1e1e978041bbe 254 PANTHER PTHR11941:SF17 2 250 1.9E-82 T 22-04-2016 JE55_RS11630 d26ce378ba51180ab0d1e1e978041bbe 254 Gene3D G3DSA:3.90.226.10 2 251 5.3E-75 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS11630 d26ce378ba51180ab0d1e1e978041bbe 254 PANTHER PTHR11941 2 250 1.9E-82 T 22-04-2016 JE55_RS11630 d26ce378ba51180ab0d1e1e978041bbe 254 Pfam PF00378 Enoyl-CoA hydratase/isomerase 8 252 5.3E-57 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 JE55_RS14770 130a758d415fcc03c1bff69c08ff32dd 454 PIRSF PIRSF006060 1 450 7.0E-64 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS14770 130a758d415fcc03c1bff69c08ff32dd 454 Pfam PF00324 Amino acid permease 12 443 2.2E-99 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 JE55_RS14770 130a758d415fcc03c1bff69c08ff32dd 454 PANTHER PTHR11785 4 448 3.8E-217 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 JE55_RS14770 130a758d415fcc03c1bff69c08ff32dd 454 ProSitePatterns PS00218 Amino acid permeases signature. 37 67 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 JE55_RS14770 130a758d415fcc03c1bff69c08ff32dd 454 PANTHER PTHR11785:SF351 4 448 3.8E-217 T 22-04-2016 JE55_RS09525 ac63a82559296dc8f0240c8bb0f2f1d8 466 PANTHER PTHR37533 234 466 1.1E-29 T 22-04-2016 JE55_RS09525 ac63a82559296dc8f0240c8bb0f2f1d8 466 Pfam PF02120 Flagellar hook-length control protein FliK 333 410 8.0E-19 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal JE55_RS09525 ac63a82559296dc8f0240c8bb0f2f1d8 466 PANTHER PTHR37533:SF2 234 466 1.1E-29 T 22-04-2016 JE55_RS10940 c1f78323448471ed16828797a33b800a 82 Gene3D G3DSA:1.10.1200.10 6 75 3.9E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS10940 c1f78323448471ed16828797a33b800a 82 Pfam PF00550 Phosphopantetheine attachment site 12 71 2.7E-6 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS10940 c1f78323448471ed16828797a33b800a 82 SUPERFAMILY SSF47336 3 78 3.14E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain JE55_RS07910 ee290b6ab0c95365a9ed4a4ff966fc63 431 Pfam PF11925 Protein of unknown function (DUF3443) 67 431 2.8E-132 T 22-04-2016 IPR021847 Protein of unknown function DUF3443 JE55_RS17515 70b27ad18a859c295da5d51e0213620c 90 Pfam PF05717 IS66 Orf2 like protein 1 80 5.9E-32 T 22-04-2016 IPR008878 Transposase IS66, Orf2 JE55_RS17515 70b27ad18a859c295da5d51e0213620c 90 PANTHER PTHR36455:SF1 1 82 1.3E-28 T 22-04-2016 JE55_RS17515 70b27ad18a859c295da5d51e0213620c 90 PANTHER PTHR36455 1 82 1.3E-28 T 22-04-2016 JE55_RS16450 ed86ae894c371c64781a4ef0d4b6aab4 335 PANTHER PTHR35007 31 333 4.1E-25 T 22-04-2016 JE55_RS16450 ed86ae894c371c64781a4ef0d4b6aab4 335 Pfam PF00482 Type II secretion system (T2SS), protein F 168 294 1.5E-11 T 22-04-2016 IPR018076 Type II secretion system F domain JE55_RS16450 ed86ae894c371c64781a4ef0d4b6aab4 335 PANTHER PTHR35007:SF1 31 333 4.1E-25 T 22-04-2016 JE55_RS04955 de7ce30d99ac30d9bc9339ce05297eb2 190 Gene3D G3DSA:1.20.144.10 72 141 2.1E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JE55_RS04955 de7ce30d99ac30d9bc9339ce05297eb2 190 SUPERFAMILY SSF48317 3 143 6.02E-15 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JE55_RS04955 de7ce30d99ac30d9bc9339ce05297eb2 190 Pfam PF01569 PAP2 superfamily 68 143 1.4E-10 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JE55_RS11450 dd477d433e64380e7082ff1d114e864d 269 PANTHER PTHR24567:SF22 11 236 6.8E-67 T 22-04-2016 JE55_RS11450 dd477d433e64380e7082ff1d114e864d 269 SUPERFAMILY SSF46785 150 225 3.34E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11450 dd477d433e64380e7082ff1d114e864d 269 PANTHER PTHR24567 11 236 6.8E-67 T 22-04-2016 JE55_RS11450 dd477d433e64380e7082ff1d114e864d 269 Gene3D G3DSA:2.60.120.10 11 131 1.8E-7 T 22-04-2016 IPR014710 RmlC-like jelly roll fold JE55_RS11450 dd477d433e64380e7082ff1d114e864d 269 SUPERFAMILY SSF51206 11 136 7.74E-11 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like JE55_RS11450 dd477d433e64380e7082ff1d114e864d 269 Gene3D G3DSA:1.10.10.10 170 221 2.7E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS11450 dd477d433e64380e7082ff1d114e864d 269 SMART SM00419 167 213 4.4E-6 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JE55_RS11450 dd477d433e64380e7082ff1d114e864d 269 Pfam PF13545 Crp-like helix-turn-helix domain 154 219 3.4E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 JE55_RS02160 3ad32280294bd3673e176043eb367932 107 PANTHER PTHR10072:SF48 1 107 2.8E-51 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 JE55_RS02160 3ad32280294bd3673e176043eb367932 107 PANTHER PTHR10072 1 107 2.8E-51 T 22-04-2016 JE55_RS02160 3ad32280294bd3673e176043eb367932 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site JE55_RS02160 3ad32280294bd3673e176043eb367932 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 9.2E-26 T 22-04-2016 IPR000361 FeS cluster biogenesis JE55_RS02160 3ad32280294bd3673e176043eb367932 107 Gene3D G3DSA:2.60.300.12 2 96 1.2E-35 T 22-04-2016 IPR000361 FeS cluster biogenesis JE55_RS02160 3ad32280294bd3673e176043eb367932 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.7E-37 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 JE55_RS02160 3ad32280294bd3673e176043eb367932 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.9E-55 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 JE55_RS02160 3ad32280294bd3673e176043eb367932 107 SUPERFAMILY SSF89360 1 96 1.7E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis JE55_RS17395 27aedcb3cd3fe09177cf1e6826cc2073 272 Gene3D G3DSA:3.40.50.170 8 198 3.8E-29 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS17395 27aedcb3cd3fe09177cf1e6826cc2073 272 Pfam PF00551 Formyl transferase 66 176 7.0E-17 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS17395 27aedcb3cd3fe09177cf1e6826cc2073 272 PANTHER PTHR11138 19 229 1.5E-15 T 22-04-2016 JE55_RS17395 27aedcb3cd3fe09177cf1e6826cc2073 272 SUPERFAMILY SSF53328 9 197 3.01E-32 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 JE55_RS01825 10ca9de69f2bc910e2ef65f52fb96938 150 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 25 139 7.3E-15 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly JE55_RS09750 ced07d5114e970a98f77a498e244ccdc 114 SUPERFAMILY SSF101498 43 100 2.48E-11 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 JE55_RS09750 ced07d5114e970a98f77a498e244ccdc 114 Pfam PF04316 Anti-sigma-28 factor, FlgM 49 99 1.3E-10 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal JE55_RS09750 ced07d5114e970a98f77a498e244ccdc 114 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 10 101 1.0E-16 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 JE55_RS08690 4c44d915c4fa0443f3da03eaa352b49a 168 Pfam PF04612 Type II secretion system (T2SS), protein M 8 164 1.7E-42 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 JE55_RS08690 4c44d915c4fa0443f3da03eaa352b49a 168 Gene3D G3DSA:3.30.1360.100 90 162 5.6E-7 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain JE55_RS08690 4c44d915c4fa0443f3da03eaa352b49a 168 SUPERFAMILY SSF103054 90 163 8.63E-15 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain JE55_RS06130 dacabe7604342681a56cd804906209a2 279 Pfam PF07042 TrfA protein 31 198 1.2E-12 T 22-04-2016 IPR010751 Plasmid replication initiator protein TrfA JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 SUPERFAMILY SSF53474 37 318 4.63E-58 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 95 7.6E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 PRINTS PR00111 Alpha/beta hydrolase fold signature 125 138 7.6E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 PRINTS PR00111 Alpha/beta hydrolase fold signature 139 152 7.6E-10 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 Pfam PF00561 alpha/beta hydrolase fold 55 177 3.9E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 PANTHER PTHR10992:SF771 18 320 6.9E-76 T 22-04-2016 JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 Gene3D G3DSA:3.40.50.1820 18 318 8.9E-77 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 PRINTS PR00412 Epoxide hydrolase signature 246 262 2.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 PRINTS PR00412 Epoxide hydrolase signature 80 95 2.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 PRINTS PR00412 Epoxide hydrolase signature 60 78 2.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 PRINTS PR00412 Epoxide hydrolase signature 139 152 2.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 PRINTS PR00412 Epoxide hydrolase signature 125 138 2.0E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 JE55_RS02745 cbc1f0905ab190167cafbc20627f582f 342 PANTHER PTHR10992 18 320 6.9E-76 T 22-04-2016 JE55_RS16170 9c9d66e95ecc1aafc03b6fb7b4585956 117 PANTHER PTHR11803 11 114 5.2E-32 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family JE55_RS16170 9c9d66e95ecc1aafc03b6fb7b4585956 117 Pfam PF01042 Endoribonuclease L-PSP 13 114 2.2E-23 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family JE55_RS16170 9c9d66e95ecc1aafc03b6fb7b4585956 117 PANTHER PTHR11803:SF17 11 114 5.2E-32 T 22-04-2016 JE55_RS16170 9c9d66e95ecc1aafc03b6fb7b4585956 117 SUPERFAMILY SSF55298 11 115 5.34E-29 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS16170 9c9d66e95ecc1aafc03b6fb7b4585956 117 Gene3D G3DSA:3.30.1330.40 12 114 1.2E-25 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like JE55_RS17865 d1c0f040959c906800ce87fa714ac1e9 346 PANTHER PTHR21266 90 322 4.8E-20 T 22-04-2016 JE55_RS17865 d1c0f040959c906800ce87fa714ac1e9 346 PANTHER PTHR21266:SF19 90 322 4.8E-20 T 22-04-2016 JE55_RS17865 d1c0f040959c906800ce87fa714ac1e9 346 SUPERFAMILY SSF55961 102 329 7.14E-29 T 22-04-2016 JE55_RS10075 3bd5011a23919e7fc53511a30cd73144 358 SUPERFAMILY SSF56935 31 358 1.25E-70 T 22-04-2016 JE55_RS10075 3bd5011a23919e7fc53511a30cd73144 358 Gene3D G3DSA:2.40.160.10 31 357 4.0E-83 T 22-04-2016 IPR023614 Porin domain JE55_RS10075 3bd5011a23919e7fc53511a30cd73144 358 Pfam PF13609 Gram-negative porin 17 342 1.3E-56 T 22-04-2016 JE55_RS08870 357110d5bacf12efbe79bd4069641c1d 269 Pfam PF10703 Molybdenum cofactor biosynthesis protein F 6 260 4.9E-84 T 22-04-2016 IPR024724 Molybdenum cofactor biosynthesis protein F JE55_RS17295 a176218de1d9a6d7c68a0ec504681170 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 261 1.9E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17295 a176218de1d9a6d7c68a0ec504681170 272 Gene3D G3DSA:1.10.3720.10 67 256 3.2E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17295 a176218de1d9a6d7c68a0ec504681170 272 SUPERFAMILY SSF161098 68 248 1.09E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS17295 a176218de1d9a6d7c68a0ec504681170 272 PANTHER PTHR30177 62 268 1.5E-71 T 22-04-2016 JE55_RS17295 a176218de1d9a6d7c68a0ec504681170 272 PANTHER PTHR30177:SF11 62 268 1.5E-71 T 22-04-2016 JE55_RS10760 f7db261d17d91a5fae1a4a87f3b428b0 49 Pfam PF11174 Protein of unknown function (DUF2970) 1 48 3.4E-20 T 22-04-2016 IPR021344 Protein of unknown function DUF2970 JE55_RS18080 fb995ceb79bed7a63097a94c95327ee0 329 PANTHER PTHR10584:SF186 7 324 3.6E-109 T 22-04-2016 JE55_RS18080 fb995ceb79bed7a63097a94c95327ee0 329 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 JE55_RS18080 fb995ceb79bed7a63097a94c95327ee0 329 Pfam PF00294 pfkB family carbohydrate kinase 6 306 3.5E-59 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB JE55_RS18080 fb995ceb79bed7a63097a94c95327ee0 329 PANTHER PTHR10584 7 324 3.6E-109 T 22-04-2016 JE55_RS18080 fb995ceb79bed7a63097a94c95327ee0 329 SUPERFAMILY SSF53613 4 312 1.5E-79 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS18080 fb995ceb79bed7a63097a94c95327ee0 329 Gene3D G3DSA:3.40.1190.20 3 313 7.9E-88 T 22-04-2016 IPR029056 Ribokinase-like JE55_RS00575 e8bde0299b93417e74e6bda3dd56ef92 146 PANTHER PTHR13355 17 145 2.1E-26 T 22-04-2016 JE55_RS00575 e8bde0299b93417e74e6bda3dd56ef92 146 Pfam PF13673 Acetyltransferase (GNAT) domain 54 145 1.3E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS00575 e8bde0299b93417e74e6bda3dd56ef92 146 PANTHER PTHR13355:SF8 17 145 2.1E-26 T 22-04-2016 JE55_RS00575 e8bde0299b93417e74e6bda3dd56ef92 146 SUPERFAMILY SSF55729 11 145 7.27E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS00575 e8bde0299b93417e74e6bda3dd56ef92 146 Gene3D G3DSA:3.40.630.30 18 144 1.6E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS10320 30775b2ca71bbf94df99ccf9c5d24fba 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 3.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10320 30775b2ca71bbf94df99ccf9c5d24fba 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 3.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10320 30775b2ca71bbf94df99ccf9c5d24fba 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10320 30775b2ca71bbf94df99ccf9c5d24fba 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 3.8E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10320 30775b2ca71bbf94df99ccf9c5d24fba 225 Gene3D G3DSA:3.40.50.720 1 224 1.4E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10320 30775b2ca71bbf94df99ccf9c5d24fba 225 Pfam PF00106 short chain dehydrogenase 2 183 1.4E-22 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10320 30775b2ca71bbf94df99ccf9c5d24fba 225 SUPERFAMILY SSF51735 1 225 8.71E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10320 30775b2ca71bbf94df99ccf9c5d24fba 225 PANTHER PTHR24322 6 176 3.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10320 30775b2ca71bbf94df99ccf9c5d24fba 225 PANTHER PTHR24322:SF540 6 176 3.3E-28 T 22-04-2016 JE55_RS18195 e92987ec0401be1d1d651aaa8b76cb4d 435 Pfam PF01566 Natural resistance-associated macrophage protein 48 406 4.5E-119 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS18195 e92987ec0401be1d1d651aaa8b76cb4d 435 PANTHER PTHR11706 2 432 7.6E-159 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS18195 e92987ec0401be1d1d651aaa8b76cb4d 435 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 26 400 7.5E-100 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS18195 e92987ec0401be1d1d651aaa8b76cb4d 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 344 361 1.1E-51 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS18195 e92987ec0401be1d1d651aaa8b76cb4d 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 316 335 1.1E-51 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS18195 e92987ec0401be1d1d651aaa8b76cb4d 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 212 235 1.1E-51 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS18195 e92987ec0401be1d1d651aaa8b76cb4d 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 135 154 1.1E-51 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS18195 e92987ec0401be1d1d651aaa8b76cb4d 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 376 395 1.1E-51 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS18195 e92987ec0401be1d1d651aaa8b76cb4d 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 107 133 1.1E-51 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS18195 e92987ec0401be1d1d651aaa8b76cb4d 435 PRINTS PR00447 Natural resistance-associated macrophage protein signature 160 181 1.1E-51 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 JE55_RS11875 ad276056063bd571646b9883b658af24 308 PANTHER PTHR34820 19 307 8.9E-17 T 22-04-2016 JE55_RS11875 ad276056063bd571646b9883b658af24 308 Pfam PF05425 Copper resistance protein D 197 299 2.7E-20 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 JE55_RS03040 bea9f34eeddf562548bb2808e2a66ae6 108 Pfam PF12728 Helix-turn-helix domain 7 52 1.8E-9 T 22-04-2016 JE55_RS07195 8b4e004af74733bc919818236f55f67f 94 Pfam PF13627 Prokaryotic lipoprotein-attachment site 9 28 5.4E-10 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site JE55_RS05480 1aa79094699f73adb5cd88d5c2564db0 130 Gene3D G3DSA:3.10.180.10 10 127 4.7E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS05480 1aa79094699f73adb5cd88d5c2564db0 130 PANTHER PTHR33993 10 126 8.8E-22 T 22-04-2016 JE55_RS05480 1aa79094699f73adb5cd88d5c2564db0 130 PANTHER PTHR33993:SF4 10 126 8.8E-22 T 22-04-2016 JE55_RS05480 1aa79094699f73adb5cd88d5c2564db0 130 SUPERFAMILY SSF54593 10 126 8.17E-14 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JE55_RS18045 9ea1394175d37e0db142abb1ae69dc57 144 Pfam PF14083 PGDYG protein 40 141 8.9E-51 T 22-04-2016 IPR025688 PGDYG protein JE55_RS08155 588d73cca77afdc922c9687400a3f9ce 359 Pfam PF11876 Protein of unknown function (DUF3396) 121 334 3.7E-46 T 22-04-2016 IPR021815 Protein of unknown function DUF3396 JE55_RS08330 0d9fbb083f26771cb5dfdedeefce9dd0 213 Pfam PF03551 Transcriptional regulator PadR-like family 15 90 6.0E-10 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal JE55_RS08330 0d9fbb083f26771cb5dfdedeefce9dd0 213 Gene3D G3DSA:1.10.10.10 9 96 3.8E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS08330 0d9fbb083f26771cb5dfdedeefce9dd0 213 SUPERFAMILY SSF46785 11 183 1.46E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13680 c53ea1535bc983d24d69c33191137ebc 151 PANTHER PTHR42641 3 148 1.4E-58 T 22-04-2016 JE55_RS13680 c53ea1535bc983d24d69c33191137ebc 151 PANTHER PTHR42641:SF2 3 148 1.4E-58 T 22-04-2016 JE55_RS13680 c53ea1535bc983d24d69c33191137ebc 151 Pfam PF05232 Chlorhexidine efflux transporter 80 143 5.3E-23 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter JE55_RS13680 c53ea1535bc983d24d69c33191137ebc 151 Pfam PF05232 Chlorhexidine efflux transporter 12 75 1.6E-23 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter JE55_RS01835 e31c706b6bda34c44a0037c620dadd68 191 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 6 101 2.1E-20 T 22-04-2016 IPR006521 Tail protein I JE55_RS01835 e31c706b6bda34c44a0037c620dadd68 191 Pfam PF09684 Phage tail protein (Tail_P2_I) 6 156 3.3E-37 T 22-04-2016 IPR006521 Tail protein I JE55_RS15815 b9ca5388bd744ec4d38d99604378b36f 128 Pfam PF16998 17 kDa outer membrane surface antigen 44 126 2.0E-6 T 22-04-2016 IPR032635 Surface antigen domain JE55_RS02135 11745cd47b2d996685be2f46ceffde61 241 Pfam PF05433 Glycine zipper 2TM domain 154 193 3.3E-8 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 JE55_RS09575 023e5a468fae4ea69c4e996a9d25e4c0 105 SUPERFAMILY SSF160544 5 86 3.14E-20 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal JE55_RS09575 023e5a468fae4ea69c4e996a9d25e4c0 105 Gene3D G3DSA:3.40.1690.10 6 86 3.8E-20 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal JE55_RS09575 023e5a468fae4ea69c4e996a9d25e4c0 105 PANTHER PTHR30531 5 96 1.3E-26 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JE55_RS09575 023e5a468fae4ea69c4e996a9d25e4c0 105 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 82 7.5E-15 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JE55_RS10895 005a254e222af1b90964c432a68583bd 383 Pfam PF00285 Citrate synthase, C-terminal domain 12 359 5.0E-29 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 JE55_RS10895 005a254e222af1b90964c432a68583bd 383 Gene3D G3DSA:1.10.580.10 18 74 8.8E-7 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 JE55_RS10895 005a254e222af1b90964c432a68583bd 383 Gene3D G3DSA:1.10.580.10 138 241 2.6E-6 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 JE55_RS10895 005a254e222af1b90964c432a68583bd 383 SUPERFAMILY SSF48256 6 362 2.09E-54 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 JE55_RS10895 005a254e222af1b90964c432a68583bd 383 Gene3D G3DSA:1.10.230.10 242 328 4.6E-11 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain JE55_RS15620 53f572ae0e0644ed56feaf12a150c72f 277 Pfam PF13503 Domain of unknown function (DUF4123) 33 158 1.7E-18 T 22-04-2016 IPR025391 Domain of unknown function DUF4123 JE55_RS10995 c961f39414b6677c4c63cb8078158d05 32 Pfam PF08173 Membrane bound YbgT-like protein 1 27 2.8E-15 T 22-04-2016 IPR012994 Membrane bound YbgT-like JE55_RS10995 c961f39414b6677c4c63cb8078158d05 32 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 5.4E-18 T 22-04-2016 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545|UniPathway: UPA00705 JE55_RS02910 7464f91ae4168e2ec8907f9157ea4d97 467 Pfam PF13884 Chaperone of endosialidase 342 387 3.7E-6 T 22-04-2016 IPR030392 Intramolecular chaperone auto-processing domain JE55_RS16060 487b407cc36e5abe1e53f09732734e54 202 Pfam PF03358 NADPH-dependent FMN reductase 65 140 4.8E-6 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 JE55_RS16060 487b407cc36e5abe1e53f09732734e54 202 Gene3D G3DSA:3.40.50.360 1 197 7.9E-66 T 22-04-2016 IPR029039 Flavoprotein-like domain JE55_RS16060 487b407cc36e5abe1e53f09732734e54 202 SUPERFAMILY SSF52218 1 196 2.31E-56 T 22-04-2016 IPR029039 Flavoprotein-like domain JE55_RS16060 487b407cc36e5abe1e53f09732734e54 202 PANTHER PTHR30546 1 202 1.2E-67 T 22-04-2016 JE55_RS16060 487b407cc36e5abe1e53f09732734e54 202 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 196 3.5E-40 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 JE55_RS15575 08fea8d856e316224479e6e427663ccb 162 Gene3D G3DSA:1.10.760.10 39 155 6.3E-6 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS15575 08fea8d856e316224479e6e427663ccb 162 SUPERFAMILY SSF46626 16 157 1.43E-9 T 22-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 JE55_RS09550 57a6c0104c8a5d809fda6cd86bbb483f 598 Pfam PF08345 Flagellar M-ring protein C-terminal 288 463 6.0E-52 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal JE55_RS09550 57a6c0104c8a5d809fda6cd86bbb483f 598 Pfam PF01514 Secretory protein of YscJ/FliF family 68 257 1.7E-76 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF JE55_RS09550 57a6c0104c8a5d809fda6cd86bbb483f 598 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 54 596 1.1E-127 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JE55_RS09550 57a6c0104c8a5d809fda6cd86bbb483f 598 PIRSF PIRSF004862 40 598 6.6E-158 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JE55_RS09550 57a6c0104c8a5d809fda6cd86bbb483f 598 PRINTS PR01009 Flagellar M-ring protein signature 233 251 5.6E-42 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JE55_RS09550 57a6c0104c8a5d809fda6cd86bbb483f 598 PRINTS PR01009 Flagellar M-ring protein signature 158 176 5.6E-42 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JE55_RS09550 57a6c0104c8a5d809fda6cd86bbb483f 598 PRINTS PR01009 Flagellar M-ring protein signature 190 204 5.6E-42 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JE55_RS09550 57a6c0104c8a5d809fda6cd86bbb483f 598 PRINTS PR01009 Flagellar M-ring protein signature 301 319 5.6E-42 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JE55_RS09550 57a6c0104c8a5d809fda6cd86bbb483f 598 PRINTS PR01009 Flagellar M-ring protein signature 387 411 5.6E-42 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 JE55_RS09550 57a6c0104c8a5d809fda6cd86bbb483f 598 PANTHER PTHR30046 53 598 1.7E-175 T 22-04-2016 JE55_RS09550 57a6c0104c8a5d809fda6cd86bbb483f 598 PANTHER PTHR30046:SF0 53 598 1.7E-175 T 22-04-2016 JE55_RS08600 29064aa5e9dbdbf6b4625f9bc9b95f20 236 PANTHER PTHR11922 1 196 4.8E-46 T 22-04-2016 JE55_RS08600 29064aa5e9dbdbf6b4625f9bc9b95f20 236 Pfam PF00117 Glutamine amidotransferase class-I 20 186 1.6E-14 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 JE55_RS08600 29064aa5e9dbdbf6b4625f9bc9b95f20 236 PANTHER PTHR11922:SF11 1 196 4.8E-46 T 22-04-2016 JE55_RS08600 29064aa5e9dbdbf6b4625f9bc9b95f20 236 SUPERFAMILY SSF52317 1 203 2.45E-40 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS08600 29064aa5e9dbdbf6b4625f9bc9b95f20 236 Gene3D G3DSA:3.40.50.880 2 231 1.3E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like JE55_RS17450 70ee881678fa9b25590a7950fdc7718d 573 SUPERFAMILY SSF53067 137 226 9.58E-18 T 22-04-2016 JE55_RS17450 70ee881678fa9b25590a7950fdc7718d 573 SUPERFAMILY SSF53067 254 355 9.58E-18 T 22-04-2016 JE55_RS17450 70ee881678fa9b25590a7950fdc7718d 573 SUPERFAMILY SSF53067 2 87 9.58E-18 T 22-04-2016 JE55_RS17450 70ee881678fa9b25590a7950fdc7718d 573 Pfam PF02543 Carbamoyltransferase N-terminus 3 350 1.9E-60 T 22-04-2016 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 JE55_RS17450 70ee881678fa9b25590a7950fdc7718d 573 Pfam PF16861 Carbamoyltransferase C-terminus 401 572 3.2E-69 T 22-04-2016 IPR031730 Carbamoyltransferase, C-terminal JE55_RS17450 70ee881678fa9b25590a7950fdc7718d 573 PANTHER PTHR34847 1 572 3.4E-123 T 22-04-2016 JE55_RS10825 a576358093050ffb69b78be9a61023f8 298 PANTHER PTHR32196:SF27 1 290 5.3E-132 T 22-04-2016 JE55_RS10825 a576358093050ffb69b78be9a61023f8 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 258 1.7E-33 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS10825 a576358093050ffb69b78be9a61023f8 298 PANTHER PTHR32196 1 290 5.3E-132 T 22-04-2016 JE55_RS05950 db6c21342fe794b02a2ae70d3b775c1b 305 SUPERFAMILY SSF55781 110 294 1.63E-45 T 22-04-2016 IPR029016 GAF domain-like JE55_RS05950 db6c21342fe794b02a2ae70d3b775c1b 305 PANTHER PTHR30136 25 304 8.5E-59 T 22-04-2016 JE55_RS05950 db6c21342fe794b02a2ae70d3b775c1b 305 Gene3D G3DSA:3.30.450.40 116 299 2.7E-57 T 22-04-2016 IPR029016 GAF domain-like JE55_RS05950 db6c21342fe794b02a2ae70d3b775c1b 305 SMART SM00346 48 134 6.6E-16 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JE55_RS05950 db6c21342fe794b02a2ae70d3b775c1b 305 SUPERFAMILY SSF46785 49 118 9.1E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05950 db6c21342fe794b02a2ae70d3b775c1b 305 Gene3D G3DSA:1.10.10.10 47 115 1.8E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS05950 db6c21342fe794b02a2ae70d3b775c1b 305 Pfam PF09339 IclR helix-turn-helix domain 51 98 2.1E-10 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 JE55_RS05950 db6c21342fe794b02a2ae70d3b775c1b 305 Pfam PF01614 Bacterial transcriptional regulator 163 290 2.7E-19 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal JE55_RS04080 bb225291a3efb78f7e35d01b60c407c6 114 Pfam PF11287 Protein of unknown function (DUF3088) 2 111 4.9E-37 T 22-04-2016 IPR021439 Protein of unknown function DUF3088 JE55_RS04885 6e712bddbb9c2bb8f8320c9dffbaf1ae 294 Pfam PF00483 Nucleotidyl transferase 11 259 2.6E-26 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 JE55_RS04885 6e712bddbb9c2bb8f8320c9dffbaf1ae 294 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 265 1.9E-114 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 JE55_RS04885 6e712bddbb9c2bb8f8320c9dffbaf1ae 294 SUPERFAMILY SSF53448 4 276 6.28E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS04885 6e712bddbb9c2bb8f8320c9dffbaf1ae 294 PANTHER PTHR22572:SF14 6 283 2.4E-98 T 22-04-2016 JE55_RS04885 6e712bddbb9c2bb8f8320c9dffbaf1ae 294 PANTHER PTHR22572 6 283 2.4E-98 T 22-04-2016 JE55_RS04885 6e712bddbb9c2bb8f8320c9dffbaf1ae 294 Gene3D G3DSA:3.90.550.10 4 275 2.8E-68 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS23355 e8d254f09373383200e08a129dace3ce 94 Pfam PF04403 Paraquat-inducible protein A 3 93 6.9E-22 T 22-04-2016 IPR007498 Paraquat-inducible protein A JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 SUPERFAMILY SSF51735 1 220 3.57E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 4.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 4.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 162 4.7E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 Pfam PF00106 short chain dehydrogenase 7 183 1.1E-30 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PANTHER PTHR24322:SF546 143 175 3.4E-37 T 22-04-2016 JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PANTHER PTHR24322:SF546 10 127 3.4E-37 T 22-04-2016 JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 Gene3D G3DSA:3.40.50.720 2 204 1.1E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PANTHER PTHR24322 143 175 3.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PANTHER PTHR24322 10 127 3.4E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 1.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 1.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 162 1.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS10360 2c1d327b23cd48ae0b68ac766c4fa54a 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 1.2E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR JE55_RS15370 e2976b723ad670b1ab1f6070db1f4970 302 Gene3D G3DSA:2.70.98.10 4 298 3.3E-37 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 JE55_RS15370 e2976b723ad670b1ab1f6070db1f4970 302 PANTHER PTHR11122:SF14 87 298 2.6E-30 T 22-04-2016 JE55_RS15370 e2976b723ad670b1ab1f6070db1f4970 302 PANTHER PTHR11122:SF14 8 71 2.6E-30 T 22-04-2016 JE55_RS15370 e2976b723ad670b1ab1f6070db1f4970 302 PANTHER PTHR11122 87 298 2.6E-30 T 22-04-2016 JE55_RS15370 e2976b723ad670b1ab1f6070db1f4970 302 PANTHER PTHR11122 8 71 2.6E-30 T 22-04-2016 JE55_RS15370 e2976b723ad670b1ab1f6070db1f4970 302 SUPERFAMILY SSF74650 2 299 6.91E-49 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 JE55_RS15370 e2976b723ad670b1ab1f6070db1f4970 302 Pfam PF01263 Aldose 1-epimerase 12 249 3.4E-15 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 JE55_RS01890 2c5ed141b2e2b807980636a1a2b02397 497 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 31 480 1.8E-91 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 JE55_RS01890 2c5ed141b2e2b807980636a1a2b02397 497 Pfam PF05136 Phage portal protein, lambda family 31 375 1.1E-106 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 JE55_RS01775 bea58afa65588d3eebb34206fdafb718 181 Pfam PF03245 Bacteriophage Rz lysis protein 52 171 4.1E-13 T 22-04-2016 IPR004929 Bacteriophage Rz lysis protein GO:0019076|GO:0019835 JE55_RS09910 91adbb846b8f0ef4710d90755219c0e2 493 Pfam PF05598 Transposase domain (DUF772) 58 134 3.3E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal JE55_RS09910 91adbb846b8f0ef4710d90755219c0e2 493 Pfam PF13751 Transposase DDE domain 331 449 1.6E-28 T 22-04-2016 IPR025668 Transposase DDE domain JE55_RS09910 91adbb846b8f0ef4710d90755219c0e2 493 PANTHER PTHR33408 3 489 1.2E-32 T 22-04-2016 JE55_RS04800 8fa7fe902412cc486c84e240cc9dee1f 261 Pfam PF16074 Type IV Pilus-assembly protein W 150 257 8.2E-9 T 22-04-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 JE55_RS06180 05efd561155acce41c293d86a16263cf 532 Pfam PF03432 Relaxase/Mobilisation nuclease domain 1 224 2.5E-41 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 JE55_RS14025 ccf48ad1e1858da378a60f32e59c62e0 429 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 43 386 5.3E-67 T 22-04-2016 IPR006427 Phage portal protein, HK97 JE55_RS14025 ccf48ad1e1858da378a60f32e59c62e0 429 Pfam PF04860 Phage portal protein 50 380 1.8E-76 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein JE55_RS04745 94b08926ae99dbf700d4d07ff0aa1faf 135 Gene3D G3DSA:3.90.1590.10 2 131 7.5E-41 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 JE55_RS04745 94b08926ae99dbf700d4d07ff0aa1faf 135 SUPERFAMILY SSF51316 5 132 1.05E-42 T 22-04-2016 IPR011057 Mss4-like JE55_RS04745 94b08926ae99dbf700d4d07ff0aa1faf 135 PANTHER PTHR33337:SF4 7 132 4.3E-38 T 22-04-2016 JE55_RS04745 94b08926ae99dbf700d4d07ff0aa1faf 135 PANTHER PTHR33337 7 132 4.3E-38 T 22-04-2016 JE55_RS04745 94b08926ae99dbf700d4d07ff0aa1faf 135 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 30 115 8.6E-21 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 JE55_RS15110 ccfd4d1180bb073eed21fdbdd56fb3cc 277 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 277 134.841 T 22-04-2016 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 JE55_RS15110 ccfd4d1180bb073eed21fdbdd56fb3cc 277 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 1 270 5.2E-101 T 22-04-2016 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 JE55_RS15110 ccfd4d1180bb073eed21fdbdd56fb3cc 277 PANTHER PTHR30201 1 277 4.2E-75 T 22-04-2016 JE55_RS15110 ccfd4d1180bb073eed21fdbdd56fb3cc 277 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 2 267 6.5E-75 T 22-04-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 JE55_RS01965 becffa930b9a58082c73047aa865eb84 438 Gene3D G3DSA:3.90.1530.10 32 130 2.8E-5 T 22-04-2016 JE55_RS01965 becffa930b9a58082c73047aa865eb84 438 SUPERFAMILY SSF109709 142 212 7.46E-7 T 22-04-2016 JE55_RS01965 becffa930b9a58082c73047aa865eb84 438 Pfam PF02195 ParB-like nuclease domain 35 128 3.2E-4 T 22-04-2016 IPR003115 ParB/Sulfiredoxin JE55_RS01965 becffa930b9a58082c73047aa865eb84 438 SUPERFAMILY SSF110849 29 128 2.27E-10 T 22-04-2016 IPR003115 ParB/Sulfiredoxin JE55_RS13960 d287b20e48d95d37a76adb6eef11a3c1 326 SUPERFAMILY SSF50346 127 173 7.06E-5 T 22-04-2016 IPR011033 PRC-barrel-like JE55_RS13960 d287b20e48d95d37a76adb6eef11a3c1 326 SUPERFAMILY SSF50346 217 302 6.47E-10 T 22-04-2016 IPR011033 PRC-barrel-like JE55_RS11455 1b87f9cbb5c6cfc886132c9d79bee947 460 Pfam PF13727 CoA-binding domain 53 233 4.2E-35 T 22-04-2016 JE55_RS11455 1b87f9cbb5c6cfc886132c9d79bee947 460 SUPERFAMILY SSF51735 132 222 2.28E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS11455 1b87f9cbb5c6cfc886132c9d79bee947 460 PANTHER PTHR30576:SF0 1 460 3.7E-140 T 22-04-2016 JE55_RS11455 1b87f9cbb5c6cfc886132c9d79bee947 460 PANTHER PTHR30576 1 460 3.7E-140 T 22-04-2016 JE55_RS11455 1b87f9cbb5c6cfc886132c9d79bee947 460 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 8 460 4.6E-156 T 22-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 JE55_RS11455 1b87f9cbb5c6cfc886132c9d79bee947 460 Pfam PF02397 Bacterial sugar transferase 269 452 9.2E-56 T 22-04-2016 IPR003362 Bacterial sugar transferase JE55_RS11455 1b87f9cbb5c6cfc886132c9d79bee947 460 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 8 459 3.3E-140 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase JE55_RS11455 1b87f9cbb5c6cfc886132c9d79bee947 460 Gene3D G3DSA:3.40.50.720 133 215 4.7E-4 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS17330 cd68ac9cb1f0c9d1c1ab2107786d1044 62 Pfam PF12085 Protein of unknown function (DUF3562) 3 61 4.0E-29 T 22-04-2016 IPR021945 Protein of unknown function DUF3562 JE55_RS01450 9745be2dc5d7b7b845b2dfd86ddc8a1a 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 172 354 1.8E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS01450 9745be2dc5d7b7b845b2dfd86ddc8a1a 365 PANTHER PTHR30325 14 359 3.3E-153 T 22-04-2016 JE55_RS01450 9745be2dc5d7b7b845b2dfd86ddc8a1a 365 SUPERFAMILY SSF161098 150 337 6.67E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS01450 9745be2dc5d7b7b845b2dfd86ddc8a1a 365 Gene3D G3DSA:1.10.3720.10 149 351 2.9E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS07830 3d4ab65270e10588118c71f4a612a73e 97 SUPERFAMILY SSF81273 61 97 3.77E-9 T 22-04-2016 JE55_RS07830 3d4ab65270e10588118c71f4a612a73e 97 SMART SM00528 58 97 2.3E-8 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 JE55_RS07830 3d4ab65270e10588118c71f4a612a73e 97 Pfam PF00816 H-NS histone family 7 89 3.2E-26 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 JE55_RS07830 3d4ab65270e10588118c71f4a612a73e 97 Gene3D G3DSA:4.10.430.10 64 97 3.5E-6 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 JE55_RS03275 e540b6b27ec4f7445a9d6d6316ac835a 480 Pfam PF16980 Putative citrate transport 32 474 4.9E-198 T 22-04-2016 IPR031566 Putative citrate transporter JE55_RS12350 d39c2efa97d85bf3e898b162113ebb06 242 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 11 155 9.9E-11 T 22-04-2016 IPR010419 Carbon monoxide dehydrogenase subunit G JE55_RS12350 d39c2efa97d85bf3e898b162113ebb06 242 Gene3D G3DSA:3.30.530.20 1 169 9.0E-44 T 22-04-2016 IPR023393 START-like domain JE55_RS12350 d39c2efa97d85bf3e898b162113ebb06 242 SUPERFAMILY SSF55961 1 158 5.19E-24 T 22-04-2016 JE55_RS05650 a69fa98ec16c514408f9d7d2418cd6c5 304 Pfam PF13230 Glutamine amidotransferases class-II 1 269 6.8E-126 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 JE55_RS05650 a69fa98ec16c514408f9d7d2418cd6c5 304 Gene3D G3DSA:3.60.20.10 1 255 1.0E-66 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS05650 a69fa98ec16c514408f9d7d2418cd6c5 304 PANTHER PTHR11907 1 264 9.4E-101 T 22-04-2016 JE55_RS05650 a69fa98ec16c514408f9d7d2418cd6c5 304 PANTHER PTHR11907:SF10 1 264 9.4E-101 T 22-04-2016 JE55_RS05650 a69fa98ec16c514408f9d7d2418cd6c5 304 SUPERFAMILY SSF56235 2 254 4.25E-43 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal JE55_RS14405 05f1c8fbd66676bf233210638d64a1e3 200 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 33 159 1.6E-43 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 JE55_RS14405 05f1c8fbd66676bf233210638d64a1e3 200 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 148 3.0E-30 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 JE55_RS14405 05f1c8fbd66676bf233210638d64a1e3 200 SUPERFAMILY SSF143243 9 181 8.37E-58 T 22-04-2016 JE55_RS14405 05f1c8fbd66676bf233210638d64a1e3 200 PANTHER PTHR10884 24 178 4.3E-74 T 22-04-2016 JE55_RS14405 05f1c8fbd66676bf233210638d64a1e3 200 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 161 9.9E-46 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 JE55_RS14405 05f1c8fbd66676bf233210638d64a1e3 200 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 1 168 36.422 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 JE55_RS14405 05f1c8fbd66676bf233210638d64a1e3 200 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 121 142 - T 22-04-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 272 289 2.7E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 251 271 2.7E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 100 122 2.7E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 220 238 2.7E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 296 310 2.7E-14 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 PANTHER PTHR11767:SF58 49 312 1.4E-58 T 22-04-2016 JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 PANTHER PTHR11767 49 312 1.4E-58 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 Pfam PF01007 Inward rectifier potassium channel 95 314 5.3E-39 T 22-04-2016 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 SUPERFAMILY SSF81324 47 156 5.76E-26 T 22-04-2016 JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 Gene3D G3DSA:1.10.287.70 44 142 1.5E-27 T 22-04-2016 JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 SUPERFAMILY SSF81296 133 314 2.29E-60 T 22-04-2016 IPR014756 Immunoglobulin E-set JE55_RS10240 3f622ebe2a5f2873afdd449545deb3f2 333 Gene3D G3DSA:2.60.40.1400 143 312 2.2E-53 T 22-04-2016 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic JE55_RS01780 841acbb9c0eba7e018a5b773cc5eeb35 165 Pfam PF00959 Phage lysozyme 42 155 5.9E-9 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 JE55_RS01780 841acbb9c0eba7e018a5b773cc5eeb35 165 SUPERFAMILY SSF53955 12 165 1.94E-43 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS01780 841acbb9c0eba7e018a5b773cc5eeb35 165 Gene3D G3DSA:1.10.530.40 23 165 2.2E-48 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 JE55_RS01780 841acbb9c0eba7e018a5b773cc5eeb35 165 PANTHER PTHR38107 9 165 2.2E-29 T 22-04-2016 JE55_RS10210 5990c822630956d7ef002bff7157a01b 185 Pfam PF12306 Inclusion body protein 11 184 1.9E-53 T 22-04-2016 IPR021087 Uncharacterised protein family PixA/AidA JE55_RS07900 9391ca426b6f89004fe59a20168af618 401 Gene3D G3DSA:3.40.1690.10 217 357 2.6E-64 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal JE55_RS07900 9391ca426b6f89004fe59a20168af618 401 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 352 3.0E-121 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 JE55_RS07900 9391ca426b6f89004fe59a20168af618 401 PANTHER PTHR30531 3 361 1.8E-137 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JE55_RS07900 9391ca426b6f89004fe59a20168af618 401 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 1.4E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JE55_RS07900 9391ca426b6f89004fe59a20168af618 401 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 1.4E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JE55_RS07900 9391ca426b6f89004fe59a20168af618 401 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 1.4E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JE55_RS07900 9391ca426b6f89004fe59a20168af618 401 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 1.4E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JE55_RS07900 9391ca426b6f89004fe59a20168af618 401 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 1.4E-40 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JE55_RS07900 9391ca426b6f89004fe59a20168af618 401 PANTHER PTHR30531:SF0 3 361 1.8E-137 T 22-04-2016 JE55_RS07900 9391ca426b6f89004fe59a20168af618 401 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 6.0E-124 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 JE55_RS07900 9391ca426b6f89004fe59a20168af618 401 SUPERFAMILY SSF160544 244 351 9.94E-42 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal JE55_RS01805 3a0bb7ffd73eefd696ba1bd0b0be5686 804 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 133 511 5.7E-8 T 22-04-2016 IPR010090 Phage tail tape measure protein JE55_RS01805 3a0bb7ffd73eefd696ba1bd0b0be5686 804 Pfam PF10145 Phage-related minor tail protein 181 385 4.3E-20 T 22-04-2016 IPR010090 Phage tail tape measure protein JE55_RS14465 271a862a807898d1605efbb379c4b445 101 Pfam PF10993 Protein of unknown function (DUF2818) 5 99 3.9E-36 T 22-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane JE55_RS14465 271a862a807898d1605efbb379c4b445 101 PIRSF PIRSF019883 1 101 1.3E-46 T 22-04-2016 IPR016768 Uncharacterised conserved protein UCP019883, membrane JE55_RS05060 df88124371e49e5b1fd3aa877031903a 507 PANTHER PTHR12526 181 283 1.7E-26 T 22-04-2016 JE55_RS05060 df88124371e49e5b1fd3aa877031903a 507 PANTHER PTHR12526 107 162 1.7E-26 T 22-04-2016 JE55_RS05060 df88124371e49e5b1fd3aa877031903a 507 PANTHER PTHR12526 299 503 1.7E-26 T 22-04-2016 JE55_RS05060 df88124371e49e5b1fd3aa877031903a 507 Pfam PF00534 Glycosyl transferases group 1 323 477 8.1E-18 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 JE55_RS05060 df88124371e49e5b1fd3aa877031903a 507 Gene3D G3DSA:3.40.50.2000 315 480 7.2E-12 T 22-04-2016 JE55_RS05060 df88124371e49e5b1fd3aa877031903a 507 SUPERFAMILY SSF53756 117 503 1.48E-43 T 22-04-2016 JE55_RS15755 549900c32a069c06e9ed0348d837b33c 321 PANTHER PTHR37089 28 321 2.2E-48 T 22-04-2016 JE55_RS15755 549900c32a069c06e9ed0348d837b33c 321 Pfam PF05229 Spore Coat Protein U domain 186 317 2.0E-29 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS15755 549900c32a069c06e9ed0348d837b33c 321 Pfam PF05229 Spore Coat Protein U domain 22 161 2.6E-21 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS15755 549900c32a069c06e9ed0348d837b33c 321 SMART SM00972 97 162 3.8E-16 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS15755 549900c32a069c06e9ed0348d837b33c 321 SMART SM00972 259 318 8.7E-8 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS15755 549900c32a069c06e9ed0348d837b33c 321 PANTHER PTHR37089:SF1 28 321 2.2E-48 T 22-04-2016 JE55_RS13265 70ef37abaa63551ca278b5f910597935 1347 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 995 1344 2.1E-60 T 22-04-2016 IPR007452 Translocation and assembly module TamB JE55_RS13265 70ef37abaa63551ca278b5f910597935 1347 PANTHER PTHR36985 1098 1345 1.1E-57 T 22-04-2016 JE55_RS13265 70ef37abaa63551ca278b5f910597935 1347 PANTHER PTHR36985 513 1082 1.1E-57 T 22-04-2016 JE55_RS13265 70ef37abaa63551ca278b5f910597935 1347 PANTHER PTHR36985 19 495 1.1E-57 T 22-04-2016 JE55_RS14720 cd23d8c6a9a9c7863f212d86c756805a 653 Pfam PF05787 Bacterial protein of unknown function (DUF839) 198 557 7.6E-19 T 22-04-2016 IPR008557 Protein of unknown function DUF839 JE55_RS03410 17fbb76ef25c6fe4700bc95dddea3048 456 Pfam PF01523 Putative modulator of DNA gyrase 42 329 1.7E-53 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS03410 17fbb76ef25c6fe4700bc95dddea3048 456 PANTHER PTHR30624 11 456 7.2E-141 T 22-04-2016 JE55_RS03410 17fbb76ef25c6fe4700bc95dddea3048 456 SUPERFAMILY SSF111283 17 455 7.32E-122 T 22-04-2016 JE55_RS03410 17fbb76ef25c6fe4700bc95dddea3048 456 PANTHER PTHR30624:SF1 11 456 7.2E-141 T 22-04-2016 JE55_RS08790 fa55a5ca6b60a78c51b07ed82c7a93b8 265 PANTHER PTHR24220 13 217 4.1E-94 T 22-04-2016 JE55_RS08790 fa55a5ca6b60a78c51b07ed82c7a93b8 265 SMART SM00382 41 220 7.5E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS08790 fa55a5ca6b60a78c51b07ed82c7a93b8 265 PANTHER PTHR24220:SF561 13 217 4.1E-94 T 22-04-2016 JE55_RS08790 fa55a5ca6b60a78c51b07ed82c7a93b8 265 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 JE55_RS08790 fa55a5ca6b60a78c51b07ed82c7a93b8 265 SUPERFAMILY SSF52540 12 236 2.48E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08790 fa55a5ca6b60a78c51b07ed82c7a93b8 265 Gene3D G3DSA:3.40.50.300 6 218 1.2E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS08790 fa55a5ca6b60a78c51b07ed82c7a93b8 265 Pfam PF00005 ABC transporter 32 171 5.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS12260 a8b7492195e8078ba7ebe9894d71d743 249 Pfam PF03591 AzlC protein 22 162 8.7E-31 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease JE55_RS12260 a8b7492195e8078ba7ebe9894d71d743 249 PANTHER PTHR34979 10 240 1.1E-21 T 22-04-2016 JE55_RS09305 70cc4fb11a0aa70c343e44fa14a167e6 357 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 276 1.3E-43 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 JE55_RS09305 70cc4fb11a0aa70c343e44fa14a167e6 357 PANTHER PTHR34138 5 352 6.6E-64 T 22-04-2016 JE55_RS09305 70cc4fb11a0aa70c343e44fa14a167e6 357 Pfam PF04085 rod shape-determining protein MreC 131 273 1.7E-34 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 JE55_RS09305 70cc4fb11a0aa70c343e44fa14a167e6 357 PANTHER PTHR34138:SF1 5 352 6.6E-64 T 22-04-2016 JE55_RS00370 bea11d1c2c6388804ca9a8034e94916c 335 Pfam PF00535 Glycosyl transferase family 2 14 174 9.8E-27 T 22-04-2016 IPR001173 Glycosyltransferase 2-like JE55_RS00370 bea11d1c2c6388804ca9a8034e94916c 335 PANTHER PTHR10859:SF49 4 333 1.4E-112 T 22-04-2016 JE55_RS00370 bea11d1c2c6388804ca9a8034e94916c 335 PANTHER PTHR10859 4 333 1.4E-112 T 22-04-2016 JE55_RS00370 bea11d1c2c6388804ca9a8034e94916c 335 Gene3D G3DSA:3.90.550.10 10 150 4.1E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS00370 bea11d1c2c6388804ca9a8034e94916c 335 SUPERFAMILY SSF53448 8 186 3.99E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases JE55_RS20345 161cf0007ac2136bb094301d4d196b55 346 PANTHER PTHR24423 214 346 1.8E-19 T 22-04-2016 JE55_RS20345 161cf0007ac2136bb094301d4d196b55 346 SMART SM00091 226 294 2.1E-7 T 22-04-2016 IPR000014 PAS domain JE55_RS20345 161cf0007ac2136bb094301d4d196b55 346 Pfam PF00989 PAS fold 229 340 7.6E-18 T 22-04-2016 IPR013767 PAS fold GO:0006355 JE55_RS20345 161cf0007ac2136bb094301d4d196b55 346 Gene3D G3DSA:3.30.450.20 214 341 1.7E-25 T 22-04-2016 JE55_RS20345 161cf0007ac2136bb094301d4d196b55 346 SMART SM00086 301 343 1.3E-7 T 22-04-2016 IPR001610 PAC motif JE55_RS20345 161cf0007ac2136bb094301d4d196b55 346 SUPERFAMILY SSF55785 214 341 5.06E-27 T 22-04-2016 IPR000014 PAS domain JE55_RS20345 161cf0007ac2136bb094301d4d196b55 346 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 225 346 1.5E-25 T 22-04-2016 IPR000014 PAS domain JE55_RS16455 8355d6d387f0a285b4296eb620c6e18a 340 PANTHER PTHR35007 101 335 1.1E-38 T 22-04-2016 JE55_RS16455 8355d6d387f0a285b4296eb620c6e18a 340 PANTHER PTHR35007:SF2 101 335 1.1E-38 T 22-04-2016 JE55_RS16455 8355d6d387f0a285b4296eb620c6e18a 340 Pfam PF00482 Type II secretion system (T2SS), protein F 197 323 2.7E-11 T 22-04-2016 IPR018076 Type II secretion system F domain JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 29 53 4.0E-6 T 22-04-2016 JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 120 140 4.0E-6 T 22-04-2016 JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 296 320 4.0E-6 T 22-04-2016 JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 PRINTS PR01036 Tetracycline resistance protein TetB signature 150 174 4.0E-6 T 22-04-2016 JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 Pfam PF07690 Major Facilitator Superfamily 30 423 2.9E-56 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 SUPERFAMILY SSF103473 485 510 7.06E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 SUPERFAMILY SSF103473 8 207 7.06E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 SUPERFAMILY SSF103473 262 433 7.06E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 Gene3D G3DSA:1.20.1250.20 268 439 8.0E-23 T 22-04-2016 JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 Gene3D G3DSA:1.20.1250.20 490 512 8.0E-23 T 22-04-2016 JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 Gene3D G3DSA:1.20.1250.20 27 207 1.7E-34 T 22-04-2016 JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 25 506 2.2E-163 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 PANTHER PTHR23501:SF52 13 514 2.7E-229 T 22-04-2016 JE55_RS08715 792ddb3bc3a4f73e05fa01d183e27397 520 PANTHER PTHR23501 13 514 2.7E-229 T 22-04-2016 JE55_RS15070 bd60c98010ff6d4c9450a6d37a4fdfab 131 Pfam PF03817 Malonate transporter MadL subunit 1 116 4.9E-48 T 22-04-2016 IPR004690 Malonate transporter MadL subunit GO:0016020 JE55_RS15070 bd60c98010ff6d4c9450a6d37a4fdfab 131 TIGRFAM TIGR00807 malonate_madL: malonate transporter, MadL subunit 1 124 1.1E-49 T 22-04-2016 IPR004690 Malonate transporter MadL subunit GO:0016020 JE55_RS13335 ed86354b0c4aabcf18f6284fed581051 172 SMART SM00972 111 169 9.7E-23 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS13335 ed86354b0c4aabcf18f6284fed581051 172 Pfam PF05229 Spore Coat Protein U domain 32 169 2.0E-34 T 22-04-2016 IPR007893 Spore coat protein U JE55_RS13335 ed86354b0c4aabcf18f6284fed581051 172 PANTHER PTHR37089 11 172 7.9E-31 T 22-04-2016 JE55_RS03675 3088dc099de84429455c7ed3766ba9fc 86 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 5 69 1.6E-28 T 22-04-2016 IPR021074 Formate dehydrogenase, delta subunit JE55_RS11590 cf665c878768b1424b724b2c19a93503 216 Pfam PF04367 Protein of unknown function (DUF502) 62 167 1.0E-35 T 22-04-2016 IPR007462 Protein of unknown function DUF502 JE55_RS11590 cf665c878768b1424b724b2c19a93503 216 PANTHER PTHR31876 11 213 7.1E-56 T 22-04-2016 JE55_RS02115 5eabbabd849e560b332ad57e25ee192d 362 PIRSF PIRSF015283 6 362 3.2E-143 T 22-04-2016 IPR016631 Regulatory, RpfE JE55_RS16990 a5cf088319899eee320fa62238ebf194 236 Pfam PF13471 Transglutaminase-like superfamily 112 220 3.7E-26 T 22-04-2016 IPR032708 Microcin J25-processing protein McjB, C-terminal JE55_RS07555 de15335dd9e0156207f57aa4c78cf45d 215 Gene3D G3DSA:3.40.630.30 20 158 3.7E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS07555 de15335dd9e0156207f57aa4c78cf45d 215 Pfam PF00583 Acetyltransferase (GNAT) family 82 155 8.9E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS07555 de15335dd9e0156207f57aa4c78cf45d 215 SUPERFAMILY SSF55729 20 159 1.08E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS00405 3698b16e751d5e13f1e7a655e6e77347 336 Pfam PF01384 Phosphate transporter family 170 325 2.0E-54 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 JE55_RS00405 3698b16e751d5e13f1e7a655e6e77347 336 Pfam PF01384 Phosphate transporter family 25 166 2.4E-37 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 JE55_RS00405 3698b16e751d5e13f1e7a655e6e77347 336 PANTHER PTHR11101 1 332 4.3E-101 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 JE55_RS02330 55830e195d8c0f374e23e039e1324ad5 277 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 8 219 3.8E-25 T 22-04-2016 JE55_RS05895 36118c95d64fa3ec6a677a5033e5ec12 205 SUPERFAMILY SSF101307 51 200 5.23E-37 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 JE55_RS05895 36118c95d64fa3ec6a677a5033e5ec12 205 PANTHER PTHR36305 43 205 1.1E-48 T 22-04-2016 JE55_RS05895 36118c95d64fa3ec6a677a5033e5ec12 205 Pfam PF04608 Phosphatidylglycerophosphatase A 58 199 1.3E-46 T 22-04-2016 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 JE55_RS17505 2edae8c5aa5841abdf075065a4e1aabe 108 Pfam PF00872 Transposase, Mutator family 15 103 3.2E-17 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 JE55_RS17505 2edae8c5aa5841abdf075065a4e1aabe 108 PANTHER PTHR33217 25 103 2.9E-18 T 22-04-2016 JE55_RS18100 7d9f6871fc3f7f82f8a678cd06495caa 356 PANTHER PTHR30106 12 356 2.4E-99 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 JE55_RS18100 7d9f6871fc3f7f82f8a678cd06495caa 356 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 22 352 1.3E-72 T 22-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 JE55_RS18100 7d9f6871fc3f7f82f8a678cd06495caa 356 Pfam PF03601 Conserved hypothetical protein 698 22 332 2.5E-85 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 JE55_RS18100 7d9f6871fc3f7f82f8a678cd06495caa 356 PANTHER PTHR30106:SF2 12 356 2.4E-99 T 22-04-2016 JE55_RS10770 50bd63f521eacaff230f0d7e5f0479fb 69 Pfam PF11137 Protein of unknown function (DUF2909) 1 60 4.2E-25 T 22-04-2016 IPR021313 Protein of unknown function DUF2909 JE55_RS14175 d1ff1b068f3dd3a4b8aa7fb03971a5d7 30 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 28 9.0E-8 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 JE55_RS14175 d1ff1b068f3dd3a4b8aa7fb03971a5d7 30 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 28 2.4E-8 T 22-04-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 JE55_RS28155 3f2afcb2495cff0a1a81147321a63a14 243 Pfam PF14579 Helix-hairpin-helix motif 57 152 6.3E-24 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 JE55_RS28155 3f2afcb2495cff0a1a81147321a63a14 243 Gene3D G3DSA:1.10.150.280 93 137 2.5E-6 T 22-04-2016 JE55_RS28155 3f2afcb2495cff0a1a81147321a63a14 243 PANTHER PTHR32294 1 243 4.0E-77 T 22-04-2016 JE55_RS28155 3f2afcb2495cff0a1a81147321a63a14 243 PANTHER PTHR32294:SF4 1 243 4.0E-77 T 22-04-2016 JE55_RS02705 babac06c4dee82ff57b899c9abf45d75 237 SUPERFAMILY SSF161098 17 214 5.1E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS02705 babac06c4dee82ff57b899c9abf45d75 237 PANTHER PTHR30450 1 237 3.0E-135 T 22-04-2016 JE55_RS02705 babac06c4dee82ff57b899c9abf45d75 237 PANTHER PTHR30450:SF5 1 237 3.0E-135 T 22-04-2016 JE55_RS02705 babac06c4dee82ff57b899c9abf45d75 237 Gene3D G3DSA:1.10.3720.10 16 227 1.9E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS02705 babac06c4dee82ff57b899c9abf45d75 237 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 218 4.2E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 JE55_RS02705 babac06c4dee82ff57b899c9abf45d75 237 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 20 122 3.8E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 JE55_RS00825 81e1995d2664588d3434766450140625 241 Pfam PF15579 Immunity protein 52 134 235 1.1E-37 T 22-04-2016 IPR028969 Immunity protein 52 JE55_RS00825 81e1995d2664588d3434766450140625 241 PIRSF PIRSF029636 1 241 2.7E-91 T 22-04-2016 IPR016929 Uncharacterised conserved protein UCP029636 JE55_RS11365 4858099b7564757e162d2b9dfab4332b 766 TIGRFAM TIGR03882 cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain 217 364 1.6E-24 T 22-04-2016 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain JE55_RS11365 4858099b7564757e162d2b9dfab4332b 766 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 403 728 1.1E-92 T 22-04-2016 IPR003776 YcaO-like domain JE55_RS11365 4858099b7564757e162d2b9dfab4332b 766 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 403 728 1.1E-34 T 22-04-2016 IPR003776 YcaO-like domain JE55_RS11365 4858099b7564757e162d2b9dfab4332b 766 PANTHER PTHR37809 130 766 1.1E-44 T 22-04-2016 JE55_RS11365 4858099b7564757e162d2b9dfab4332b 766 TIGRFAM TIGR03604 TOMM_cyclo_SagD: thiazole/oxazole-forming peptide maturase, SagD family component 404 761 4.7E-74 T 22-04-2016 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component JE55_RS05975 65045b4142a57ca598819d20f7606dcc 692 SMART SM00955 235 521 2.9E-62 T 22-04-2016 JE55_RS05975 65045b4142a57ca598819d20f7606dcc 692 PANTHER PTHR23355:SF5 240 582 3.3E-39 T 22-04-2016 JE55_RS05975 65045b4142a57ca598819d20f7606dcc 692 Pfam PF00773 RNB domain 478 519 2.5E-9 T 22-04-2016 JE55_RS05975 65045b4142a57ca598819d20f7606dcc 692 Pfam PF00773 RNB domain 241 470 1.3E-32 T 22-04-2016 JE55_RS05975 65045b4142a57ca598819d20f7606dcc 692 PANTHER PTHR23355 240 582 3.3E-39 T 22-04-2016 JE55_RS05975 65045b4142a57ca598819d20f7606dcc 692 SUPERFAMILY SSF50249 196 570 4.85E-72 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold JE55_RS21530 a6e9283b945805a42e68fcdd13112599 98 PANTHER PTHR11228:SF26 2 97 5.6E-27 T 22-04-2016 JE55_RS21530 a6e9283b945805a42e68fcdd13112599 98 PANTHER PTHR11228 2 97 5.6E-27 T 22-04-2016 JE55_RS04335 bf882726a7d931147bbde3b406e40daa 419 Pfam PF01943 Polysaccharide biosynthesis protein 15 283 1.4E-6 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 JE55_RS13855 d046aa54ae0b367ea8ed2ed1921d3ff1 1867 Pfam PF09397 Ftsk gamma domain 1802 1862 5.1E-26 T 22-04-2016 IPR018541 FtsK gamma domain JE55_RS13855 d046aa54ae0b367ea8ed2ed1921d3ff1 1867 SUPERFAMILY SSF52540 1464 1768 9.96E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13855 d046aa54ae0b367ea8ed2ed1921d3ff1 1867 SMART SM00382 1522 1717 3.7E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS13855 d046aa54ae0b367ea8ed2ed1921d3ff1 1867 PANTHER PTHR22683 1321 1864 1.6E-258 T 22-04-2016 JE55_RS13855 d046aa54ae0b367ea8ed2ed1921d3ff1 1867 Gene3D G3DSA:3.40.50.300 1460 1763 1.0E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS13855 d046aa54ae0b367ea8ed2ed1921d3ff1 1867 PANTHER PTHR22683:SF41 1321 1864 1.6E-258 T 22-04-2016 JE55_RS13855 d046aa54ae0b367ea8ed2ed1921d3ff1 1867 SUPERFAMILY SSF46785 1801 1863 1.5E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS13855 d046aa54ae0b367ea8ed2ed1921d3ff1 1867 SMART SM00843 1800 1865 5.9E-39 T 22-04-2016 IPR018541 FtsK gamma domain JE55_RS13855 d046aa54ae0b367ea8ed2ed1921d3ff1 1867 Pfam PF01580 FtsK/SpoIIIE family 1486 1696 1.4E-69 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 JE55_RS09935 bfacdd88152a737929037e49b3719832 66 Gene3D G3DSA:3.30.70.100 2 60 3.9E-16 T 22-04-2016 JE55_RS09935 bfacdd88152a737929037e49b3719832 66 SUPERFAMILY SSF55008 3 62 4.19E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 JE55_RS09935 bfacdd88152a737929037e49b3719832 66 Pfam PF00403 Heavy-metal-associated domain 3 60 9.6E-8 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 JE55_RS09935 bfacdd88152a737929037e49b3719832 66 ProSitePatterns PS01047 Heavy-metal-associated domain. 5 34 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 JE55_RS16115 8a91555b7283c799a820585e1098d411 357 SUPERFAMILY SSF89372 13 267 3.2E-21 T 22-04-2016 JE55_RS11480 bb290c13b4bd30c8c9228726d3fa8fce 144 SMART SM00754 26 142 1.1E-32 T 22-04-2016 IPR010895 CHRD JE55_RS11480 bb290c13b4bd30c8c9228726d3fa8fce 144 Pfam PF07452 CHRD domain 29 140 1.0E-25 T 22-04-2016 IPR010895 CHRD JE55_RS12095 6d71db2dcfd01f277b817f7c4ed14759 263 Pfam PF13280 WYL domain 104 171 6.4E-8 T 22-04-2016 IPR026881 WYL domain JE55_RS02955 ca99892623d8e865d9d1ec2fe6b45400 507 Pfam PF05136 Phage portal protein, lambda family 40 374 1.8E-101 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 JE55_RS02955 ca99892623d8e865d9d1ec2fe6b45400 507 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 41 459 5.5E-85 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 JE55_RS10875 9b7bc85b2eaa13eb0dbb43abd29fc5a5 363 PANTHER PTHR30294 159 360 3.0E-28 T 22-04-2016 JE55_RS10875 9b7bc85b2eaa13eb0dbb43abd29fc5a5 363 PANTHER PTHR30294 5 46 3.0E-28 T 22-04-2016 JE55_RS10875 9b7bc85b2eaa13eb0dbb43abd29fc5a5 363 Pfam PF12698 ABC-2 family transporter protein 151 355 7.0E-16 T 22-04-2016 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 SUPERFAMILY SSF81301 233 444 5.07E-61 T 22-04-2016 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 PANTHER PTHR21262:SF0 25 767 0.0 T 22-04-2016 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 Pfam PF13328 HD domain 78 227 7.0E-53 T 22-04-2016 IPR003607 HD/PDEase domain JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 Gene3D G3DSA:3.30.460.10 244 377 4.1E-45 T 22-04-2016 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 78 764 2.7E-224 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 Pfam PF02824 TGS domain 440 499 2.4E-18 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 SMART SM00471 93 205 4.4E-11 T 22-04-2016 IPR003607 HD/PDEase domain JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 SUPERFAMILY SSF109604 58 240 3.3E-70 T 22-04-2016 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 PANTHER PTHR21262 25 767 0.0 T 22-04-2016 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 SUPERFAMILY SSF81271 427 499 3.92E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 SMART SM00954 287 397 3.6E-63 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 Pfam PF04607 Region found in RelA / SpoT proteins 287 396 1.6E-33 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 Gene3D G3DSA:3.10.20.30 440 500 4.1E-20 T 22-04-2016 IPR012675 Beta-grasp domain JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 Gene3D G3DSA:3.30.70.260 690 761 3.2E-5 T 22-04-2016 JE55_RS03860 4d918a62428901ce3613fcb2763836c2 789 Pfam PF13291 ACT domain 687 764 7.9E-14 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 JE55_RS03265 48087e3878b99023ed8f0627fe683616 491 Gene3D G3DSA:1.20.120.20 58 192 1.1E-5 T 22-04-2016 JE55_RS03265 48087e3878b99023ed8f0627fe683616 491 SUPERFAMILY SSF58113 56 205 1.57E-5 T 22-04-2016 JE55_RS03265 48087e3878b99023ed8f0627fe683616 491 PANTHER PTHR30563 3 488 1.9E-94 T 22-04-2016 JE55_RS03265 48087e3878b99023ed8f0627fe683616 491 Pfam PF02646 RmuC family 183 475 5.3E-81 T 22-04-2016 IPR003798 DNA recombination RmuC JE55_RS00110 f87b5634fedbe920f6e2acc4ab6ab6dc 63 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 7 62 7.5E-22 T 22-04-2016 IPR019201 Protein of unknown function DUF2065 JE55_RS11405 ca4bb733ba96b09a1ed08f8aabab4762 244 SUPERFAMILY SSF48317 2 143 1.96E-17 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JE55_RS11405 ca4bb733ba96b09a1ed08f8aabab4762 244 Gene3D G3DSA:1.20.144.10 73 144 7.8E-13 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JE55_RS11405 ca4bb733ba96b09a1ed08f8aabab4762 244 Pfam PF01569 PAP2 superfamily 69 144 3.8E-11 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JE55_RS13095 4786c3e575442569e7a8eb9172a0d770 493 PANTHER PTHR33408 3 489 1.6E-33 T 22-04-2016 JE55_RS13095 4786c3e575442569e7a8eb9172a0d770 493 Pfam PF05598 Transposase domain (DUF772) 58 134 2.4E-24 T 22-04-2016 IPR008490 Transposase InsH, N-terminal JE55_RS13095 4786c3e575442569e7a8eb9172a0d770 493 Pfam PF13751 Transposase DDE domain 331 449 1.6E-28 T 22-04-2016 IPR025668 Transposase DDE domain JE55_RS07730 39586b5b4a5d742afb1bd287513a9ea9 534 Pfam PF14459 Prokaryotic E2 family C 46 161 3.0E-22 T 22-04-2016 IPR032864 Prokaryotic E2 family C JE55_RS07730 39586b5b4a5d742afb1bd287513a9ea9 534 Pfam PF00899 ThiF family 185 469 3.2E-16 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JE55_RS07730 39586b5b4a5d742afb1bd287513a9ea9 534 Gene3D G3DSA:3.40.50.720 193 293 1.4E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS07730 39586b5b4a5d742afb1bd287513a9ea9 534 SUPERFAMILY SSF69572 193 333 9.55E-13 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 JE55_RS06970 d2ee6d492bb8cbdb94c83ff5c5fe1c98 137 PANTHER PTHR21256 10 137 7.0E-60 T 22-04-2016 JE55_RS06970 d2ee6d492bb8cbdb94c83ff5c5fe1c98 137 SUPERFAMILY SSF141734 10 115 2.88E-47 T 22-04-2016 JE55_RS06970 d2ee6d492bb8cbdb94c83ff5c5fe1c98 137 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 59 112 8.0E-26 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 JE55_RS06970 d2ee6d492bb8cbdb94c83ff5c5fe1c98 137 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 36 110 1.1E-34 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 JE55_RS06970 d2ee6d492bb8cbdb94c83ff5c5fe1c98 137 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 10 114 31.556 T 22-04-2016 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 JE55_RS06805 8560b771ef78afb2de4182d06283df4a 121 Pfam PF05069 Phage virion morphogenesis family 1 119 5.3E-27 T 22-04-2016 IPR006522 Phage virion morphogensis protein JE55_RS06805 8560b771ef78afb2de4182d06283df4a 121 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 1 113 7.1E-16 T 22-04-2016 IPR006522 Phage virion morphogensis protein JE55_RS03485 77df896fa9b3f7735de462bc6af6bc78 155 Pfam PF05154 TM2 domain 12 69 3.3E-9 T 22-04-2016 IPR007829 TM2 domain JE55_RS00355 acf1f047d8fbd1db8a1091b63d1effa4 568 PANTHER PTHR33908 6 443 4.7E-79 T 22-04-2016 JE55_RS00355 acf1f047d8fbd1db8a1091b63d1effa4 568 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 77 238 2.0E-18 T 22-04-2016 JE55_RS00355 acf1f047d8fbd1db8a1091b63d1effa4 568 PANTHER PTHR33908:SF3 6 443 4.7E-79 T 22-04-2016 JE55_RS09470 2df69ef92296250d305414cf0dc3fc55 68 Pfam PF11381 Protein of unknown function (DUF3185) 3 61 1.4E-20 T 22-04-2016 IPR021521 Protein of unknown function DUF3185 JE55_RS05500 76be91bcb05400f249df2dbc2278a238 109 PANTHER PTHR10160 10 96 1.3E-32 T 22-04-2016 JE55_RS05500 76be91bcb05400f249df2dbc2278a238 109 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 11 94 8.6E-35 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 JE55_RS03965 55601755594a553b16be0ff5054990b6 153 Gene3D G3DSA:3.40.630.30 3 133 2.0E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS03965 55601755594a553b16be0ff5054990b6 153 Pfam PF00583 Acetyltransferase (GNAT) family 51 127 2.8E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 JE55_RS03965 55601755594a553b16be0ff5054990b6 153 SUPERFAMILY SSF55729 3 134 9.37E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase JE55_RS05785 7ca55683db3c15c24f282828d0d93b29 235 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 208 3.6E-36 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 JE55_RS05785 7ca55683db3c15c24f282828d0d93b29 235 PANTHER PTHR30625 7 216 1.2E-36 T 22-04-2016 JE55_RS12550 0b7cb45044bc58c8e9b1fc89ffe3406d 171 Gene3D G3DSA:2.30.110.10 8 166 5.1E-60 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS12550 0b7cb45044bc58c8e9b1fc89ffe3406d 171 Pfam PF01613 Flavin reductase like domain 21 168 2.1E-36 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 JE55_RS12550 0b7cb45044bc58c8e9b1fc89ffe3406d 171 PANTHER PTHR30466 9 171 2.7E-39 T 22-04-2016 JE55_RS12550 0b7cb45044bc58c8e9b1fc89ffe3406d 171 SUPERFAMILY SSF50475 3 169 1.42E-50 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 JE55_RS12550 0b7cb45044bc58c8e9b1fc89ffe3406d 171 SMART SM00903 20 167 1.0E-64 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 JE55_RS09565 b5837c4fcfa2724a924f77172825b37b 108 Gene3D G3DSA:1.20.58.380 6 93 3.3E-30 T 22-04-2016 JE55_RS09565 b5837c4fcfa2724a924f77172825b37b 108 Pfam PF05400 Flagellar protein FliT 21 99 1.1E-17 T 22-04-2016 IPR008622 Flagellar protein FliT JE55_RS06175 cc9a7aec1335e7cec1697628f990e136 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 6.4E-12 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 JE55_RS06175 cc9a7aec1335e7cec1697628f990e136 92 SUPERFAMILY SSF47598 3 44 2.74E-13 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 JE55_RS17210 9918e9416f19b440dc5e9f8fa1fe0991 244 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 5 238 3.9E-61 T 22-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 JE55_RS17210 9918e9416f19b440dc5e9f8fa1fe0991 244 PANTHER PTHR36925 2 244 1.2E-70 T 22-04-2016 JE55_RS30400 b6e90a012e5455746fabbaff5bfbd453 160 Pfam PF13801 Heavy-metal resistance 16 126 3.1E-13 T 22-04-2016 IPR025961 Heavy-metal resistance protein JE55_RS14255 d8aa2382666bd83363aca8171363f7f3 635 PANTHER PTHR33908 48 547 1.5E-16 T 22-04-2016 JE55_RS07205 12f2e30d4c031c50117d9e6fc84c6f25 241 Pfam PF01794 Ferric reductase like transmembrane component 82 191 3.1E-15 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain JE55_RS07205 12f2e30d4c031c50117d9e6fc84c6f25 241 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 29 230 25.692 T 22-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 JE55_RS07205 12f2e30d4c031c50117d9e6fc84c6f25 241 PANTHER PTHR36964 30 240 2.6E-52 T 22-04-2016 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 SUPERFAMILY SSF81593 269 423 3.06E-41 T 22-04-2016 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 Gene3D G3DSA:3.30.460.10 630 791 2.4E-48 T 22-04-2016 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 Gene3D G3DSA:3.30.460.10 88 267 1.9E-61 T 22-04-2016 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 1 925 19.395 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 SUPERFAMILY SSF81301 519 795 5.23E-71 T 22-04-2016 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 11 253 2.6E-66 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 547 785 1.1E-62 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 PANTHER PTHR30621 10 921 2.9E-238 T 22-04-2016 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 Pfam PF08335 GlnD PII-uridylyltransferase 279 423 4.8E-41 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 Pfam PF08335 GlnD PII-uridylyltransferase 808 895 2.8E-11 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 SUPERFAMILY SSF81301 10 268 7.19E-72 T 22-04-2016 JE55_RS05215 0079ba22abd74d45261f26813786c622 925 SUPERFAMILY SSF81593 795 924 4.0E-32 T 22-04-2016 JE55_RS10020 7fef4bd1638f269ae604e839f94fccee 311 Gene3D G3DSA:3.40.50.720 93 264 2.4E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10020 7fef4bd1638f269ae604e839f94fccee 311 Gene3D G3DSA:3.40.50.720 269 303 1.1E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10020 7fef4bd1638f269ae604e839f94fccee 311 SUPERFAMILY SSF51735 93 303 1.08E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS10020 7fef4bd1638f269ae604e839f94fccee 311 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 93 263 8.7E-7 T 22-04-2016 JE55_RS14570 5afc3097be5d99f3cc4bbef31a82b8ec 405 Pfam PF11062 Protein of unknown function (DUF2863) 2 404 6.7E-181 T 22-04-2016 IPR021292 Protein of unknown function DUF2863 JE55_RS01880 1c5b129e4cf184651f7e22536b65147d 114 Pfam PF02924 Bacteriophage lambda head decoration protein D 6 111 4.0E-27 T 22-04-2016 IPR004195 Head decoration protein D GO:0019028 JE55_RS27035 e7907f482ac48f34adb3a17960961b6a 222 Pfam PF06149 Protein of unknown function (DUF969) 188 220 8.6E-9 T 22-04-2016 IPR010374 Protein of unknown function DUF969 JE55_RS01325 0b3de459c1842f6e69ea92e4940eb606 326 Pfam PF08907 Domain of unknown function (DUF1853) 19 311 2.2E-91 T 22-04-2016 IPR015003 Protein of unknown function DUF1853 JE55_RS30925 22b174b79e53bb22c07d0fb92417c7f2 221 SUPERFAMILY SSF53474 5 49 6.46E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS30925 22b174b79e53bb22c07d0fb92417c7f2 221 Gene3D G3DSA:3.40.50.1820 7 43 5.0E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS30925 22b174b79e53bb22c07d0fb92417c7f2 221 Pfam PF03283 Pectinacetylesterase 4 69 5.2E-6 T 22-04-2016 IPR004963 Pectinacetylesterase/NOTUM GO:0016787 JE55_RS12790 3998cd796abfd98c5886578e4026f658 289 PRINTS PR01228 Eggshell protein signature 197 212 3.7E-6 T 22-04-2016 JE55_RS12790 3998cd796abfd98c5886578e4026f658 289 PRINTS PR01228 Eggshell protein signature 121 132 3.7E-6 T 22-04-2016 JE55_RS12790 3998cd796abfd98c5886578e4026f658 289 PRINTS PR01228 Eggshell protein signature 278 289 3.7E-6 T 22-04-2016 JE55_RS12790 3998cd796abfd98c5886578e4026f658 289 PRINTS PR01228 Eggshell protein signature 227 237 3.7E-6 T 22-04-2016 JE55_RS17660 1c667552d230675aa4af056f9ff258a8 104 Gene3D G3DSA:3.30.70.900 1 104 2.5E-34 T 22-04-2016 JE55_RS17660 1c667552d230675aa4af056f9ff258a8 104 SUPERFAMILY SSF54909 1 104 2.65E-35 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel JE55_RS17660 1c667552d230675aa4af056f9ff258a8 104 PANTHER PTHR21017 3 104 1.7E-27 T 22-04-2016 JE55_RS17660 1c667552d230675aa4af056f9ff258a8 104 Pfam PF07978 NIPSNAP 3 102 3.4E-36 T 22-04-2016 IPR012577 NIPSNAP JE55_RS15865 8405f1bc2c46d70c212e132a28898b4c 183 Pfam PF00293 NUDIX domain 49 148 1.2E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 JE55_RS15865 8405f1bc2c46d70c212e132a28898b4c 183 Gene3D G3DSA:3.90.79.10 46 151 1.8E-25 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS15865 8405f1bc2c46d70c212e132a28898b4c 183 SUPERFAMILY SSF55811 4 171 3.38E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 JE55_RS15865 8405f1bc2c46d70c212e132a28898b4c 183 PANTHER PTHR22769 6 173 1.9E-23 T 22-04-2016 JE55_RS07610 51428f73eb9f960a2982f8720a37d234 457 Pfam PF11170 Protein of unknown function (DUF2957) 80 428 3.3E-90 T 22-04-2016 IPR021340 Protein of unknown function DUF2957 JE55_RS08810 f5ca437e8bb126f5d616906987aa264d 386 Pfam PF13609 Gram-negative porin 22 359 6.9E-35 T 22-04-2016 JE55_RS08810 f5ca437e8bb126f5d616906987aa264d 386 Gene3D G3DSA:2.40.160.10 34 386 2.6E-68 T 22-04-2016 IPR023614 Porin domain JE55_RS08810 f5ca437e8bb126f5d616906987aa264d 386 PRINTS PR00184 Neisseria sp. porin signature 72 97 9.9E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS08810 f5ca437e8bb126f5d616906987aa264d 386 PRINTS PR00184 Neisseria sp. porin signature 214 231 9.9E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS08810 f5ca437e8bb126f5d616906987aa264d 386 PRINTS PR00184 Neisseria sp. porin signature 334 358 9.9E-5 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS08810 f5ca437e8bb126f5d616906987aa264d 386 SUPERFAMILY SSF56935 34 386 1.98E-50 T 22-04-2016 JE55_RS01790 fac0d33d2f95df485cb087f2250ab801 350 Pfam PF05954 Phage late control gene D protein (GPD) 99 310 5.3E-21 T 22-04-2016 JE55_RS01790 fac0d33d2f95df485cb087f2250ab801 350 SUPERFAMILY SSF69279 5 173 7.23E-23 T 22-04-2016 JE55_RS28840 a7b88a2a90b411bbc7a1dec83c7df137 278 Gene3D G3DSA:2.60.450.10 2 122 1.5E-8 T 22-04-2016 JE55_RS28840 a7b88a2a90b411bbc7a1dec83c7df137 278 PANTHER PTHR30189 2 262 6.3E-41 T 22-04-2016 JE55_RS28840 a7b88a2a90b411bbc7a1dec83c7df137 278 Pfam PF04453 Organic solvent tolerance protein 226 274 5.4E-6 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 JE55_RS09745 259b47a7bc229e068e890456f58e75bd 146 Pfam PF05130 FlgN protein 1 141 3.3E-35 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 JE55_RS09745 259b47a7bc229e068e890456f58e75bd 146 SUPERFAMILY SSF140566 2 126 2.22E-25 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 JE55_RS09745 259b47a7bc229e068e890456f58e75bd 146 Gene3D G3DSA:1.20.58.300 2 126 3.6E-36 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 JE55_RS11470 532f72ead965606411698a237d914ea4 340 SUPERFAMILY SSF56925 211 340 8.37E-8 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 JE55_RS10655 5420fd3b426fcb733db041a297b36d27 429 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 17 422 2.9E-178 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA JE55_RS10655 5420fd3b426fcb733db041a297b36d27 429 SUPERFAMILY SSF56059 276 347 2.36E-6 T 22-04-2016 JE55_RS10655 5420fd3b426fcb733db041a297b36d27 429 Gene3D G3DSA:3.30.1490.20 277 319 2.0E-4 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 JE55_RS10655 5420fd3b426fcb733db041a297b36d27 429 Pfam PF08886 Glutamate-cysteine ligase 17 419 1.2E-182 T 22-04-2016 IPR011718 Glutamate--cysteine ligase GshA JE55_RS09880 a2f22c9bb81bbcf1dfaff7b7af6cfa2c 504 Pfam PF04966 Carbohydrate-selective porin, OprB family 120 504 1.1E-98 T 22-04-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 JE55_RS09880 a2f22c9bb81bbcf1dfaff7b7af6cfa2c 504 PANTHER PTHR37944:SF2 107 504 3.2E-96 T 22-04-2016 JE55_RS09880 a2f22c9bb81bbcf1dfaff7b7af6cfa2c 504 PANTHER PTHR37944 107 504 3.2E-96 T 22-04-2016 JE55_RS30140 3d1f9ce1fd1448cb8de1cf9a8e119cc9 155 SUPERFAMILY SSF52540 16 141 7.1E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS30140 3d1f9ce1fd1448cb8de1cf9a8e119cc9 155 Gene3D G3DSA:3.40.50.300 17 140 4.5E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS30140 3d1f9ce1fd1448cb8de1cf9a8e119cc9 155 PANTHER PTHR13696 4 153 3.4E-18 T 22-04-2016 JE55_RS30140 3d1f9ce1fd1448cb8de1cf9a8e119cc9 155 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 19 141 2.5E-22 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JE55_RS12200 f3baec478d7ab1bdf242eeb6787b34ac 595 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 384 550 2.8E-48 T 22-04-2016 IPR021797 Virulence factor membrane-bound polymerase, C-terminal JE55_RS12200 f3baec478d7ab1bdf242eeb6787b34ac 595 Pfam PF04932 O-Antigen ligase 207 362 2.2E-16 T 22-04-2016 IPR007016 O-antigen ligase-related JE55_RS12200 f3baec478d7ab1bdf242eeb6787b34ac 595 Pfam PF15864 Protein glycosylation ligase 169 193 3.5E-10 T 22-04-2016 IPR031726 Protein glycosylation ligase domain JE55_RS31125 53d312dc9b8c0d59790403fa29bff5f4 100 Pfam PF02687 FtsX-like permease family 16 91 3.9E-10 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 JE55_RS16075 bef34da26ffff31f8656a7f61641ae27 154 SMART SM00116 77 124 0.021 T 22-04-2016 IPR000644 CBS domain JE55_RS16075 bef34da26ffff31f8656a7f61641ae27 154 SMART SM00116 13 60 7.6E-8 T 22-04-2016 IPR000644 CBS domain JE55_RS16075 bef34da26ffff31f8656a7f61641ae27 154 Pfam PF00571 CBS domain 15 59 1.9E-9 T 22-04-2016 IPR000644 CBS domain JE55_RS16075 bef34da26ffff31f8656a7f61641ae27 154 Pfam PF00571 CBS domain 71 123 1.4E-7 T 22-04-2016 IPR000644 CBS domain JE55_RS16075 bef34da26ffff31f8656a7f61641ae27 154 SUPERFAMILY SSF54631 1 141 2.02E-29 T 22-04-2016 JE55_RS16075 bef34da26ffff31f8656a7f61641ae27 154 Gene3D G3DSA:3.10.580.10 1 125 1.5E-26 T 22-04-2016 JE55_RS16075 bef34da26ffff31f8656a7f61641ae27 154 PANTHER PTHR11911 1 139 2.9E-20 T 22-04-2016 JE55_RS01760 c236a7a6153867f22a66d004ab9ecce7 171 Pfam PF15648 Restriction endonuclease fold toxin 5 55 149 1.3E-28 T 22-04-2016 IPR028904 Tox-REase-5 domain JE55_RS09485 9eb3c8bb1ec3fbc774ef03a879d090d4 287 Pfam PF00892 EamA-like transporter family 16 138 8.8E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS09485 9eb3c8bb1ec3fbc774ef03a879d090d4 287 Pfam PF00892 EamA-like transporter family 153 281 1.2E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 JE55_RS09485 9eb3c8bb1ec3fbc774ef03a879d090d4 287 SUPERFAMILY SSF103481 185 283 8.76E-15 T 22-04-2016 JE55_RS09485 9eb3c8bb1ec3fbc774ef03a879d090d4 287 SUPERFAMILY SSF103481 44 141 1.96E-8 T 22-04-2016 JE55_RS09485 9eb3c8bb1ec3fbc774ef03a879d090d4 287 PANTHER PTHR32322 1 286 6.7E-30 T 22-04-2016 JE55_RS18245 b0c0fbdc87f2cf029af61c32087b3a63 272 PANTHER PTHR30028:SF0 7 270 9.3E-83 T 22-04-2016 IPR005226 UPF0014 family JE55_RS18245 b0c0fbdc87f2cf029af61c32087b3a63 272 Pfam PF03649 Uncharacterised protein family (UPF0014) 11 251 1.1E-85 T 22-04-2016 IPR005226 UPF0014 family JE55_RS18245 b0c0fbdc87f2cf029af61c32087b3a63 272 PANTHER PTHR30028 7 270 9.3E-83 T 22-04-2016 JE55_RS18245 b0c0fbdc87f2cf029af61c32087b3a63 272 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 9 255 1.8E-61 T 22-04-2016 IPR005226 UPF0014 family JE55_RS14020 96dea85ee3c8f72647364a607d3b22fa 105 Pfam PF05135 Phage gp6-like head-tail connector protein 14 85 1.2E-7 T 22-04-2016 IPR021146 Phage gp6-like head-tail connector protein JE55_RS22700 bb9a73793cc0ba12d75ba8d6e623694b 230 SUPERFAMILY SSF141868 95 224 1.44E-7 T 22-04-2016 IPR001633 EAL domain JE55_RS05315 a66365bf2c69205fdcecc8fdc24c4249 324 Pfam PF06007 Phosphonate metabolism protein PhnJ 19 289 5.9E-143 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 JE55_RS05315 a66365bf2c69205fdcecc8fdc24c4249 324 PIRSF PIRSF011468 9 300 9.5E-154 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 JE55_RS04535 4d02bba312227a15061790bec87673bc 148 SUPERFAMILY SSF46785 29 143 1.18E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04535 4d02bba312227a15061790bec87673bc 148 Gene3D G3DSA:1.10.10.10 23 142 1.1E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS04535 4d02bba312227a15061790bec87673bc 148 PANTHER PTHR33204 23 142 6.0E-50 T 22-04-2016 JE55_RS04535 4d02bba312227a15061790bec87673bc 148 Pfam PF01638 HxlR-like helix-turn-helix 44 130 1.2E-23 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type JE55_RS04535 4d02bba312227a15061790bec87673bc 148 PANTHER PTHR33204:SF7 23 142 6.0E-50 T 22-04-2016 JE55_RS18090 ef793d0c61dfd0c6c5b7f8ec1ca90276 124 Pfam PF13630 SdpI/YhfL protein family 29 98 5.2E-12 T 22-04-2016 IPR025962 SdpI/YhfL protein family JE55_RS06260 95c2d10dea6a342e4d8a73d35c419aa5 159 Pfam PF05258 Protein of unknown function (DUF721) 22 104 1.9E-10 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 JE55_RS12105 e3076b5ff457b08261b3d988ac2d4a02 223 Pfam PF13835 Domain of unknown function (DUF4194) 26 202 8.9E-22 T 22-04-2016 IPR025449 Protein of unknown function DUF4194 JE55_RS02875 27b203e4e6ea8a6bcb66ae46cddb2a52 164 SUPERFAMILY SSF53955 10 162 1.29E-40 T 22-04-2016 IPR023346 Lysozyme-like domain JE55_RS02875 27b203e4e6ea8a6bcb66ae46cddb2a52 164 Gene3D G3DSA:1.10.530.10 9 162 1.0E-49 T 22-04-2016 JE55_RS02875 27b203e4e6ea8a6bcb66ae46cddb2a52 164 Pfam PF00959 Phage lysozyme 61 146 3.8E-6 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 JE55_RS14495 94244aa41d67a76de56c717bfaaf45cd 160 SUPERFAMILY SSF54637 18 149 1.7E-33 T 22-04-2016 IPR029069 HotDog domain JE55_RS14495 94244aa41d67a76de56c717bfaaf45cd 160 PANTHER PTHR13078 9 141 1.0E-31 T 22-04-2016 JE55_RS14495 94244aa41d67a76de56c717bfaaf45cd 160 Pfam PF01575 MaoC like domain 20 128 2.9E-26 T 22-04-2016 IPR002539 MaoC-like domain JE55_RS14495 94244aa41d67a76de56c717bfaaf45cd 160 Gene3D G3DSA:3.10.129.10 26 153 2.0E-34 T 22-04-2016 IPR029069 HotDog domain JE55_RS03355 05550ce745e0173a02a142619d933573 855 PANTHER PTHR38731:SF1 14 323 1.3E-15 T 22-04-2016 JE55_RS03355 05550ce745e0173a02a142619d933573 855 PANTHER PTHR38731 14 323 1.3E-15 T 22-04-2016 JE55_RS13775 c537d67d441373825450c67d2e192f56 516 PANTHER PTHR11819 2 509 3.8E-174 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 JE55_RS13775 c537d67d441373825450c67d2e192f56 516 PANTHER PTHR11819:SF2 2 509 3.8E-174 T 22-04-2016 JE55_RS14620 756446a56aadf737bd3a6331306df53e 154 PANTHER PTHR30007:SF0 4 96 8.8E-19 T 22-04-2016 JE55_RS14620 756446a56aadf737bd3a6331306df53e 154 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 6 81 1.1E-21 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family JE55_RS14620 756446a56aadf737bd3a6331306df53e 154 PANTHER PTHR30007 4 96 8.8E-19 T 22-04-2016 JE55_RS03735 71294d3756aded3701c2b5e09242bd18 190 Pfam PF01169 Uncharacterized protein family UPF0016 7 81 5.9E-20 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 JE55_RS03735 71294d3756aded3701c2b5e09242bd18 190 Pfam PF01169 Uncharacterized protein family UPF0016 107 181 1.7E-24 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 JE55_RS03735 71294d3756aded3701c2b5e09242bd18 190 PANTHER PTHR12608 4 189 3.3E-37 T 22-04-2016 IPR001727 Uncharacterised protein family UPF0016 GO:0016020 JE55_RS00700 59fcc85f27344deb57c028b9f89f5216 70 Gene3D G3DSA:1.20.1290.10 2 44 6.4E-9 T 22-04-2016 IPR029032 AhpD-like JE55_RS00700 59fcc85f27344deb57c028b9f89f5216 70 SUPERFAMILY SSF69118 2 40 1.97E-5 T 22-04-2016 IPR029032 AhpD-like JE55_RS05955 9a8685bf00deecc1fc96428695f2bccf 133 ProSitePatterns PS00018 EF-hand calcium-binding domain. 109 121 - T 22-04-2016 IPR018247 EF-Hand 1, calcium-binding site JE55_RS03200 686feece3fad272899e6f192cea74ef5 210 Pfam PF02620 Uncharacterized ACR, COG1399 81 202 5.1E-24 T 22-04-2016 IPR003772 Protein of unknown function DUF177 JE55_RS03200 686feece3fad272899e6f192cea74ef5 210 PANTHER PTHR38099 14 204 1.4E-18 T 22-04-2016 JE55_RS12170 8cdccb9265a30b018c95f56b45b1c0ae 327 Gene3D G3DSA:1.10.10.10 180 227 4.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12170 8cdccb9265a30b018c95f56b45b1c0ae 327 PANTHER PTHR33602 182 327 1.8E-22 T 22-04-2016 JE55_RS12170 8cdccb9265a30b018c95f56b45b1c0ae 327 Pfam PF02631 RecX family 210 320 9.6E-25 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 JE55_RS12170 8cdccb9265a30b018c95f56b45b1c0ae 327 Gene3D G3DSA:1.10.10.10 228 266 4.7E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS12170 8cdccb9265a30b018c95f56b45b1c0ae 327 Hamap MF_01114 Regulatory protein RecX [recX]. 179 324 12.94 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 JE55_RS12170 8cdccb9265a30b018c95f56b45b1c0ae 327 Gene3D G3DSA:1.10.10.10 275 322 1.1E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS14005 423d1af0c202167cef1459e8825b15b5 461 PANTHER PTHR21562 116 244 7.9E-13 T 22-04-2016 IPR004963 Pectinacetylesterase/NOTUM GO:0016787 JE55_RS14005 423d1af0c202167cef1459e8825b15b5 461 PANTHER PTHR21562 46 98 7.9E-13 T 22-04-2016 IPR004963 Pectinacetylesterase/NOTUM GO:0016787 JE55_RS14005 423d1af0c202167cef1459e8825b15b5 461 Gene3D G3DSA:3.40.50.1820 179 222 3.9E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS14005 423d1af0c202167cef1459e8825b15b5 461 SUPERFAMILY SSF53474 166 228 2.68E-6 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold JE55_RS14005 423d1af0c202167cef1459e8825b15b5 461 Pfam PF03283 Pectinacetylesterase 150 248 6.1E-11 T 22-04-2016 IPR004963 Pectinacetylesterase/NOTUM GO:0016787 JE55_RS14005 423d1af0c202167cef1459e8825b15b5 461 PANTHER PTHR21562:SF11 116 244 7.9E-13 T 22-04-2016 JE55_RS14005 423d1af0c202167cef1459e8825b15b5 461 PANTHER PTHR21562:SF11 46 98 7.9E-13 T 22-04-2016 JE55_RS17715 5b0496f46a02a17012fe205a2ad7b278 92 Pfam PF00872 Transposase, Mutator family 6 80 3.7E-26 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 JE55_RS17715 5b0496f46a02a17012fe205a2ad7b278 92 PANTHER PTHR33217 7 79 5.2E-22 T 22-04-2016 JE55_RS17125 00aef395b0ca4109bce3c0dc637a6ce6 148 SUPERFAMILY SSF159664 3 145 9.55E-27 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 JE55_RS17125 00aef395b0ca4109bce3c0dc637a6ce6 148 Pfam PF01890 Cobalamin synthesis G C-terminus 5 145 4.6E-25 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 JE55_RS17125 00aef395b0ca4109bce3c0dc637a6ce6 148 Gene3D G3DSA:3.30.420.180 3 78 1.4E-17 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 JE55_RS17125 00aef395b0ca4109bce3c0dc637a6ce6 148 Gene3D G3DSA:3.30.420.180 103 145 2.2E-10 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 JE55_RS10860 896fde6928a7729a9fec2fc923a15afe 333 Pfam PF00487 Fatty acid desaturase 71 317 5.0E-33 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 JE55_RS07915 b8b5868d08514f5f6ad3017bfbe427e5 167 Pfam PF11005 Protein of unknown function (DUF2844) 25 166 2.9E-50 T 22-04-2016 IPR021267 Protein of unknown function DUF2844 JE55_RS01925 0b32ec446800fa0cb9936ca108d4306b 830 Pfam PF05272 Virulence-associated protein E 525 717 7.1E-61 T 22-04-2016 IPR007936 Virulence-associated E JE55_RS01925 0b32ec446800fa0cb9936ca108d4306b 830 PANTHER PTHR34985 72 827 8.1E-26 T 22-04-2016 JE55_RS14095 d51c97c967069d596be2e7b0ad33a47d 95 Pfam PF14090 Helix-turn-helix domain 12 72 7.9E-5 T 22-04-2016 JE55_RS12830 ccf481790f0e1b248c4b5b4870516fc4 104 PANTHER PTHR33473 14 102 1.4E-33 T 22-04-2016 JE55_RS12830 ccf481790f0e1b248c4b5b4870516fc4 104 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 21 99 8.6E-36 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 JE55_RS12830 ccf481790f0e1b248c4b5b4870516fc4 104 SUPERFAMILY SSF54736 19 103 3.92E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JE55_RS12830 ccf481790f0e1b248c4b5b4870516fc4 104 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 6 99 28.952 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS JE55_RS12830 ccf481790f0e1b248c4b5b4870516fc4 104 Gene3D G3DSA:3.30.1390.10 6 104 8.6E-44 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JE55_RS13860 2efccdc5cae73cfc32588a2c09f0a707 182 Pfam PF03724 META domain 58 176 2.7E-24 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ JE55_RS09610 0d537ebf4409e7f574a0db1283745f07 217 PANTHER PTHR30086 2 217 1.7E-36 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS09610 0d537ebf4409e7f574a0db1283745f07 217 Pfam PF01810 LysE type translocator 16 215 3.5E-32 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 JE55_RS02775 38c970512e27d054cfdcf51c3d4c802a 152 Pfam PF09980 Predicted membrane protein (DUF2214) 4 151 1.0E-43 T 22-04-2016 IPR018706 Protein of unknown function DUF2214, membrane JE55_RS18335 459714f291e1fb3c8508f0446862f56b 129 PANTHER PTHR11472 23 129 7.5E-15 T 22-04-2016 JE55_RS18335 459714f291e1fb3c8508f0446862f56b 129 PANTHER PTHR11472:SF37 23 129 7.5E-15 T 22-04-2016 JE55_RS13945 1b2b40b98821937b6168e8e1e466de2a 126 Pfam PF11776 Nickel/cobalt transporter regulator 73 123 6.3E-26 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB JE55_RS13945 1b2b40b98821937b6168e8e1e466de2a 126 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 73 126 2.0E-24 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB JE55_RS00910 f887f73255c14bf400e3595442726533 151 Pfam PF12098 Protein of unknown function (DUF3574) 49 151 7.1E-34 T 22-04-2016 IPR021957 Protein of unknown function DUF3574 JE55_RS12955 2dadc8f69b64084bf225481ea74332a6 389 PANTHER PTHR30482:SF10 4 367 8.9E-113 T 22-04-2016 JE55_RS12955 2dadc8f69b64084bf225481ea74332a6 389 PANTHER PTHR30482 4 367 8.9E-113 T 22-04-2016 JE55_RS12955 2dadc8f69b64084bf225481ea74332a6 389 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 357 2.2E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS16465 d89e2999524a044c213762fce88b0d43 123 Pfam PF12266 Protein of unknown function (DUF3613) 36 99 2.5E-27 T 22-04-2016 IPR022053 Protein of unknown function DUF3613 JE55_RS04690 ee002bbcde24d8a0fb3e6b49be486555 219 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 3 205 6.7E-88 T 22-04-2016 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5508|MetaCyc: PWY-5523 JE55_RS04690 ee002bbcde24d8a0fb3e6b49be486555 219 PANTHER PTHR21712:SF31 1 211 9.1E-72 T 22-04-2016 JE55_RS04690 ee002bbcde24d8a0fb3e6b49be486555 219 SUPERFAMILY SSF55469 11 213 1.2E-53 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 JE55_RS04690 ee002bbcde24d8a0fb3e6b49be486555 219 Gene3D G3DSA:3.40.109.10 6 211 1.1E-50 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 JE55_RS04690 ee002bbcde24d8a0fb3e6b49be486555 219 PANTHER PTHR21712 1 211 9.1E-72 T 22-04-2016 JE55_RS04690 ee002bbcde24d8a0fb3e6b49be486555 219 Pfam PF00881 Nitroreductase family 15 179 3.5E-31 T 22-04-2016 IPR029479 Nitroreductase JE55_RS17760 7e09fe76873fee803e0b4797b92c64c8 87 SUPERFAMILY SSF54523 2 87 5.02E-21 T 22-04-2016 JE55_RS17760 7e09fe76873fee803e0b4797b92c64c8 87 Gene3D G3DSA:3.30.1300.30 14 87 1.1E-18 T 22-04-2016 JE55_RS17760 7e09fe76873fee803e0b4797b92c64c8 87 Pfam PF03895 YadA-like C-terminal region 13 87 5.1E-22 T 22-04-2016 IPR005594 YadA-like, C-terminal JE55_RS16405 c037afd44f83b2d2bceb0ce28278d363 502 Pfam PF15984 Bacterial collagen, middle region 145 343 2.1E-73 T 22-04-2016 IPR031929 Bacterial collagen-like protein, middle domain JE55_RS00795 1968f910411c0805be417390b3de82fd 77 Pfam PF15579 Immunity protein 52 13 71 2.3E-18 T 22-04-2016 IPR028969 Immunity protein 52 JE55_RS14220 ab472e9f07015e585eed383fdf6d25d9 205 Pfam PF13548 Domain of unknown function (DUF4126) 5 176 9.0E-56 T 22-04-2016 IPR025196 Domain of unknown function DUF4126 JE55_RS13255 2c7a660a37346ea3ad134547eb8b50ee 62 Pfam PF11943 Protein of unknown function (DUF3460) 3 60 3.3E-27 T 22-04-2016 IPR021853 Protein of unknown function DUF3460 JE55_RS10420 55419320f0ba517572f2b1c8f28f5453 275 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 114 134 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 JE55_RS10420 55419320f0ba517572f2b1c8f28f5453 275 Pfam PF00378 Enoyl-CoA hydratase/isomerase 41 271 2.0E-37 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 JE55_RS10420 55419320f0ba517572f2b1c8f28f5453 275 PANTHER PTHR11941 1 269 1.8E-112 T 22-04-2016 JE55_RS10420 55419320f0ba517572f2b1c8f28f5453 275 SUPERFAMILY SSF52096 39 269 2.7E-60 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS10420 55419320f0ba517572f2b1c8f28f5453 275 Gene3D G3DSA:3.90.226.10 10 266 2.2E-57 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS10420 55419320f0ba517572f2b1c8f28f5453 275 PANTHER PTHR11941:SF15 1 269 1.8E-112 T 22-04-2016 JE55_RS00770 9d48214d9a795cca969e86cae9748b98 355 Pfam PF13609 Gram-negative porin 19 325 1.3E-31 T 22-04-2016 JE55_RS00770 9d48214d9a795cca969e86cae9748b98 355 Gene3D G3DSA:2.40.160.10 33 355 3.0E-68 T 22-04-2016 IPR023614 Porin domain JE55_RS00770 9d48214d9a795cca969e86cae9748b98 355 PRINTS PR00184 Neisseria sp. porin signature 297 321 1.0E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS00770 9d48214d9a795cca969e86cae9748b98 355 PRINTS PR00184 Neisseria sp. porin signature 163 180 1.0E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS00770 9d48214d9a795cca969e86cae9748b98 355 PRINTS PR00184 Neisseria sp. porin signature 66 91 1.0E-6 T 22-04-2016 IPR002299 Porin, Neisseria sp. type GO:0006810|GO:0015288|GO:0016020 JE55_RS00770 9d48214d9a795cca969e86cae9748b98 355 SUPERFAMILY SSF56935 33 355 3.4E-63 T 22-04-2016 JE55_RS14950 ac5db58ad4ce07b9e0e33035baa431a8 200 Pfam PF07040 Protein of unknown function (DUF1326) 11 190 2.2E-56 T 22-04-2016 IPR009758 Protein of unknown function DUF1326 JE55_RS16020 45199894c4d7f17d78a85fd24184f9ec 67 Pfam PF07869 Protein of unknown function (DUF1656) 5 60 1.3E-21 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 JE55_RS03740 1fb34535a43964b65ce5e2c0d3e40b12 237 Pfam PF13590 Domain of unknown function (DUF4136) 32 191 9.8E-20 T 22-04-2016 IPR025411 Domain of unknown function DUF4136 JE55_RS04220 6845d5fd670b9bd041868bc23906d0ad 193 Pfam PF07273 Protein of unknown function (DUF1439) 42 171 2.4E-16 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 JE55_RS16240 1d499fd6466a5a26bb463abb6df916ce 398 Pfam PF11925 Protein of unknown function (DUF3443) 40 398 2.9E-137 T 22-04-2016 IPR021847 Protein of unknown function DUF3443 JE55_RS05625 3a4d08011129d8d417127a55e697fa43 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 31.893 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid JE55_RS05625 3a4d08011129d8d417127a55e697fa43 130 PANTHER PTHR21569 7 130 1.1E-64 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 JE55_RS05625 3a4d08011129d8d417127a55e697fa43 130 Gene3D G3DSA:3.30.230.10 6 130 1.3E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JE55_RS05625 3a4d08011129d8d417127a55e697fa43 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.4E-46 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 JE55_RS05625 3a4d08011129d8d417127a55e697fa43 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 JE55_RS05625 3a4d08011129d8d417127a55e697fa43 130 SUPERFAMILY SSF54211 6 130 3.79E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold JE55_RS15610 de7721e3197fec00ac38a1a25d32075d 88 Pfam PF05488 PAAR motif 9 77 4.0E-21 T 22-04-2016 IPR008727 PAAR motif JE55_RS00215 8b8b1de5f543bf3bb96c9ee9a97c0f57 253 Pfam PF01975 Survival protein SurE 3 183 3.4E-57 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 JE55_RS00215 8b8b1de5f543bf3bb96c9ee9a97c0f57 253 PANTHER PTHR30457 1 245 8.6E-90 T 22-04-2016 JE55_RS00215 8b8b1de5f543bf3bb96c9ee9a97c0f57 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 251 39.031 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 JE55_RS00215 8b8b1de5f543bf3bb96c9ee9a97c0f57 253 SUPERFAMILY SSF64167 1 246 1.57E-85 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 JE55_RS00215 8b8b1de5f543bf3bb96c9ee9a97c0f57 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 234 2.7E-67 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 JE55_RS00215 8b8b1de5f543bf3bb96c9ee9a97c0f57 253 Gene3D G3DSA:3.40.1210.10 1 245 1.6E-89 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 JE55_RS10755 5ad5f0be34b69c03860e523788e81b59 201 PANTHER PTHR21320 10 177 3.0E-36 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 JE55_RS10755 5ad5f0be34b69c03860e523788e81b59 201 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 34 177 1.1E-48 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 JE55_RS10755 5ad5f0be34b69c03860e523788e81b59 201 Gene3D G3DSA:2.60.370.10 61 185 3.3E-48 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain JE55_RS10755 5ad5f0be34b69c03860e523788e81b59 201 PIRSF PIRSF005413 1 193 2.8E-63 T 22-04-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 JE55_RS10755 5ad5f0be34b69c03860e523788e81b59 201 PANTHER PTHR21320:SF3 10 177 3.0E-36 T 22-04-2016 JE55_RS10755 5ad5f0be34b69c03860e523788e81b59 201 SUPERFAMILY SSF110111 61 180 2.48E-44 T 22-04-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain JE55_RS16895 7753b11e4651b8e0b3b9bdfcf6eacfb6 321 Gene3D G3DSA:1.25.40.10 39 224 2.4E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS16895 7753b11e4651b8e0b3b9bdfcf6eacfb6 321 SUPERFAMILY SSF48452 40 225 3.18E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 JE55_RS16895 7753b11e4651b8e0b3b9bdfcf6eacfb6 321 Pfam PF13432 Tetratricopeptide repeat 142 195 0.0044 T 22-04-2016 JE55_RS16895 7753b11e4651b8e0b3b9bdfcf6eacfb6 321 Pfam PF13432 Tetratricopeptide repeat 39 101 1.8E-9 T 22-04-2016 JE55_RS16895 7753b11e4651b8e0b3b9bdfcf6eacfb6 321 PANTHER PTHR23083 202 226 1.6E-16 T 22-04-2016 JE55_RS16895 7753b11e4651b8e0b3b9bdfcf6eacfb6 321 PANTHER PTHR23083 44 167 1.6E-16 T 22-04-2016 JE55_RS15625 57ceeb47e5357ab27549b73d7db55e1c 185 Pfam PF11745 Protein of unknown function (DUF3304) 10 140 1.3E-33 T 22-04-2016 IPR021733 Protein of unknown function DUF3304 JE55_RS03150 01462a9f20c3a02540658368e8daae4f 200 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 13 92 2.5E-13 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 JE55_RS03150 01462a9f20c3a02540658368e8daae4f 200 SUPERFAMILY SSF89069 13 82 6.41E-13 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 JE55_RS07525 71f75837c603d1ca95cb070dbbd09d38 94 PIRSF PIRSF030200 1 94 3.9E-45 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 JE55_RS07525 71f75837c603d1ca95cb070dbbd09d38 94 Pfam PF06243 Phenylacetic acid degradation B 4 91 2.9E-41 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 JE55_RS07525 71f75837c603d1ca95cb070dbbd09d38 94 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 5 94 7.7E-46 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 JE55_RS08780 63e59c52605c9e7f9aa3c60e21ba644a 170 Pfam PF11158 Protein of unknown function (DUF2938) 12 63 4.4E-15 T 22-04-2016 IPR021329 Protein of unknown function DUF2938 JE55_RS11305 7c7cb513e8c06a480aa913151fa640ca 350 Gene3D G3DSA:3.60.10.10 4 192 3.4E-12 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS11305 7c7cb513e8c06a480aa913151fa640ca 350 SUPERFAMILY SSF56219 226 287 4.08E-16 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS11305 7c7cb513e8c06a480aa913151fa640ca 350 SUPERFAMILY SSF56219 334 347 4.08E-16 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS11305 7c7cb513e8c06a480aa913151fa640ca 350 SUPERFAMILY SSF56219 3 194 4.08E-16 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase JE55_RS08735 b59d335bcd1bdddf366e491da8aee805 165 Pfam PF03748 Flagellar basal body-associated protein FliL 64 165 1.0E-25 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 JE55_RS08735 b59d335bcd1bdddf366e491da8aee805 165 PANTHER PTHR35091:SF1 3 165 1.2E-34 T 22-04-2016 JE55_RS08735 b59d335bcd1bdddf366e491da8aee805 165 PANTHER PTHR35091 3 165 1.2E-34 T 22-04-2016 JE55_RS05125 958768050e1e00b4ccd3eca1c6e2688e 133 Pfam PF14534 Domain of unknown function (DUF4440) 8 122 6.1E-16 T 22-04-2016 IPR027843 Domain of unknown function DUF4440 JE55_RS05125 958768050e1e00b4ccd3eca1c6e2688e 133 Gene3D G3DSA:3.10.450.50 2 123 3.4E-13 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS05125 958768050e1e00b4ccd3eca1c6e2688e 133 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 3 129 2.0E-18 T 22-04-2016 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 JE55_RS05125 958768050e1e00b4ccd3eca1c6e2688e 133 SUPERFAMILY SSF54427 1 125 1.03E-19 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS09955 5c2247e9dd4709cf01eae940d7e7897d 282 PANTHER PTHR30373 25 282 3.1E-64 T 22-04-2016 JE55_RS09955 5c2247e9dd4709cf01eae940d7e7897d 282 PANTHER PTHR30373:SF2 25 282 3.1E-64 T 22-04-2016 JE55_RS09955 5c2247e9dd4709cf01eae940d7e7897d 282 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 35 157 3.1E-37 T 22-04-2016 IPR007621 TPM domain JE55_RS10435 e45067a7df3c836cae318494daa0fe20 291 Gene3D G3DSA:1.10.620.20 14 187 5.2E-23 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 JE55_RS10435 e45067a7df3c836cae318494daa0fe20 291 SUPERFAMILY SSF47240 8 278 9.63E-52 T 22-04-2016 IPR009078 Ferritin-like superfamily JE55_RS17495 73c79eba305a731d110a11b1c2a9237b 213 Pfam PF06532 Protein of unknown function (DUF1109) 10 213 1.9E-60 T 22-04-2016 IPR009495 Protein of unknown function DUF1109 JE55_RS00320 21204b6f7915283af21ce4f5af938200 162 Gene3D G3DSA:3.90.1170.40 2 149 8.2E-56 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS00320 21204b6f7915283af21ce4f5af938200 162 PANTHER PTHR23404 1 149 3.1E-37 T 22-04-2016 JE55_RS00320 21204b6f7915283af21ce4f5af938200 162 SUPERFAMILY SSF54690 3 149 1.44E-52 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS00320 21204b6f7915283af21ce4f5af938200 162 PANTHER PTHR23404:SF2 1 149 3.1E-37 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS00320 21204b6f7915283af21ce4f5af938200 162 Pfam PF02391 MoaE protein 7 120 5.6E-37 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 JE55_RS01645 a27a2925607ac4ea2536c0a8eb89ec20 348 SUPERFAMILY SSF64182 16 346 3.4E-35 T 22-04-2016 JE55_RS11250 b49fd4ffd56cbd81defd8494538ef981 526 SUPERFAMILY SSF56281 247 461 6.5E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS11250 b49fd4ffd56cbd81defd8494538ef981 526 Gene3D G3DSA:3.60.15.10 273 348 4.9E-4 T 22-04-2016 IPR001279 Metallo-beta-lactamase JE55_RS10315 a6faa373ddedf1f982378979a6db1b0e 150 Gene3D G3DSA:3.10.450.50 14 148 5.4E-40 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS10315 a6faa373ddedf1f982378979a6db1b0e 150 SUPERFAMILY SSF54427 44 147 5.92E-31 T 22-04-2016 IPR032710 NTF2-like domain JE55_RS06140 dc15506f515a71f665cd7abf55d8b730 723 TIGRFAM TIGR04346 DotA_TraY: conjugal transfer/type IV secretion protein DotA/TraY 43 670 6.6E-144 T 22-04-2016 IPR027628 Conjugal transfer/type IV secretion protein DotA/TraY JE55_RS13310 aa94a5282cb9d251576123af7b3d7edb 236 Pfam PF07007 Protein of unknown function (DUF1311) 172 208 4.3E-5 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 JE55_RS13310 aa94a5282cb9d251576123af7b3d7edb 236 Pfam PF07007 Protein of unknown function (DUF1311) 49 136 1.4E-11 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 JE55_RS13740 8bc6ac24c1283b316479f76a0c6510ab 227 Pfam PF13468 Glyoxalase-like domain 8 196 6.6E-40 T 22-04-2016 IPR025870 Glyoxalase-like domain JE55_RS02920 67f4ade8bf6c8451c9467acea8d89e38 63 Pfam PF08809 Phage related hypothetical protein (DUF1799) 1 60 7.9E-15 T 22-04-2016 IPR014915 Bacteriophage TLS, TfmB JE55_RS02890 3d46c907a6c2c40febc6f2fe6526e2da 1123 PANTHER PTHR36251:SF2 1 973 0.0 T 22-04-2016 JE55_RS02890 3d46c907a6c2c40febc6f2fe6526e2da 1123 Pfam PF09327 Domain of unknown function (DUF1983) 970 1050 3.7E-27 T 22-04-2016 IPR015406 Domain of unknown function DUF1983 JE55_RS02890 3d46c907a6c2c40febc6f2fe6526e2da 1123 Pfam PF13550 Putative phage tail protein 344 505 1.2E-28 T 22-04-2016 IPR032876 Tip attachment protein J JE55_RS02890 3d46c907a6c2c40febc6f2fe6526e2da 1123 PANTHER PTHR36251 1 973 0.0 T 22-04-2016 JE55_RS18235 b9b456ab7703c24f6d815a0bf7f162ec 831 PANTHER PTHR30441:SF2 1 152 2.3E-84 T 22-04-2016 JE55_RS18235 b9b456ab7703c24f6d815a0bf7f162ec 831 PANTHER PTHR30441:SF2 237 810 2.3E-84 T 22-04-2016 JE55_RS18235 b9b456ab7703c24f6d815a0bf7f162ec 831 Pfam PF05170 AsmA family 7 717 1.2E-105 T 22-04-2016 IPR007844 AsmA JE55_RS18235 b9b456ab7703c24f6d815a0bf7f162ec 831 PANTHER PTHR30441 1 152 2.3E-84 T 22-04-2016 JE55_RS18235 b9b456ab7703c24f6d815a0bf7f162ec 831 PANTHER PTHR30441 237 810 2.3E-84 T 22-04-2016 JE55_RS05455 5bdd9da5e319389b35cd2ce8656991ff 256 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 39 198 1.6E-44 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component JE55_RS05455 5bdd9da5e319389b35cd2ce8656991ff 256 SUPERFAMILY SSF159594 37 205 2.88E-35 T 22-04-2016 JE55_RS05455 5bdd9da5e319389b35cd2ce8656991ff 256 Gene3D G3DSA:3.40.50.10610 28 206 1.5E-23 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component JE55_RS16470 948b5e00f76efc89388c3fca6222ed22 602 Pfam PF09977 Putative Tad-like Flp pilus-assembly 67 154 4.3E-17 T 22-04-2016 IPR018705 Domain of unknown function DUF2134, membrane JE55_RS14985 ab818ace1ba6fe0e2c20e54b97410ae1 233 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 9 221 6.5E-83 T 22-04-2016 IPR018715 Protein of unknown function DUF2239 JE55_RS07715 25ec99cebfe7858cf61ac004c5bb3986 86 Pfam PF10790 Protein of Unknown function (DUF2604) 11 86 5.1E-32 T 22-04-2016 IPR019726 Protein of unknown function DUF2604 JE55_RS12935 67ca4544cd4b6cce2a0ff89a71707b35 151 SUPERFAMILY SSF54534 9 150 3.14E-32 T 22-04-2016 JE55_RS12935 67ca4544cd4b6cce2a0ff89a71707b35 151 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 9 103 1.6E-11 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 JE55_RS12935 67ca4544cd4b6cce2a0ff89a71707b35 151 Gene3D G3DSA:3.10.50.40 137 150 2.3E-16 T 22-04-2016 JE55_RS12935 67ca4544cd4b6cce2a0ff89a71707b35 151 Gene3D G3DSA:3.10.50.40 8 83 2.3E-16 T 22-04-2016 JE55_RS17490 93d08966ab19ff603a1bee95838378b5 213 Pfam PF06532 Protein of unknown function (DUF1109) 10 213 4.2E-53 T 22-04-2016 IPR009495 Protein of unknown function DUF1109 JE55_RS13795 20892530ea4eef184f52bd30ee82c086 391 Pfam PF05762 VWA domain containing CoxE-like protein 185 273 1.6E-9 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like JE55_RS06660 f4f8f81121f6746f1ac50c76ab91e49f 207 Pfam PF07209 Protein of unknown function (DUF1415) 11 179 5.2E-71 T 22-04-2016 IPR009858 Protein of unknown function DUF1415 JE55_RS14775 780e5435d13690ffc87cfc090e504f8e 758 PANTHER PTHR30509:SF8 600 720 6.4E-34 T 22-04-2016 JE55_RS14775 780e5435d13690ffc87cfc090e504f8e 758 PANTHER PTHR30509:SF8 88 573 6.4E-34 T 22-04-2016 JE55_RS14775 780e5435d13690ffc87cfc090e504f8e 758 Pfam PF12805 FUSC-like inner membrane protein yccS 69 347 7.4E-75 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal JE55_RS14775 780e5435d13690ffc87cfc090e504f8e 758 Pfam PF13515 Fusaric acid resistance protein-like 414 535 1.2E-20 T 22-04-2016 JE55_RS14775 780e5435d13690ffc87cfc090e504f8e 758 PANTHER PTHR30509 600 720 6.4E-34 T 22-04-2016 JE55_RS14775 780e5435d13690ffc87cfc090e504f8e 758 PANTHER PTHR30509 88 573 6.4E-34 T 22-04-2016 JE55_RS08890 d06ae9262703f8ecb7e03bc985b683e6 395 Pfam PF08006 Protein of unknown function (DUF1700) 1 125 3.3E-21 T 22-04-2016 IPR012963 Protein of unknown function DUF1700 JE55_RS04400 3f88f4056ab9fb349b1320b02af23a53 412 Pfam PF01757 Acyltransferase family 49 379 2.2E-16 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 JE55_RS14295 dbe174f220e493f5cf0574fa94dfd2fe 251 Pfam PF11304 Protein of unknown function (DUF3106) 66 165 9.2E-34 T 22-04-2016 IPR021455 Protein of unknown function DUF3106 JE55_RS07545 2fd8cbd207e77cd9978085ffb4f45e7d 276 Pfam PF12395 Protein of unknown function 154 260 3.7E-30 T 22-04-2016 IPR022123 Protein of unknown function DUF3658 JE55_RS07545 2fd8cbd207e77cd9978085ffb4f45e7d 276 Pfam PF08874 Domain of unknown function (DUF1835) 4 119 5.9E-25 T 22-04-2016 IPR014973 Protein of unknown function DUF1835 JE55_RS27350 5d2523d9162ea0eec06dafb245dd17fd 80 Gene3D G3DSA:3.40.50.720 28 78 1.9E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain JE55_RS16890 e33d6f3883a112ec577e92e9b63a7208 314 Pfam PF00482 Type II secretion system (T2SS), protein F 173 299 4.4E-17 T 22-04-2016 IPR018076 Type II secretion system F domain JE55_RS16890 e33d6f3883a112ec577e92e9b63a7208 314 PANTHER PTHR35007:SF2 1 312 6.6E-46 T 22-04-2016 JE55_RS16890 e33d6f3883a112ec577e92e9b63a7208 314 PANTHER PTHR35007 1 312 6.6E-46 T 22-04-2016 JE55_RS15315 bb262ccb4dcd9a956b3ad1e14e41424e 160 Pfam PF10908 Protein of unknown function (DUF2778) 25 148 6.2E-39 T 22-04-2016 IPR021225 Protein of unknown function DUF2778 JE55_RS13645 79ed97fe21a109f9335268f80ebc11b9 135 Pfam PF14347 Domain of unknown function (DUF4399) 45 135 2.0E-34 T 22-04-2016 IPR025512 Domain of unknown function DUF4399 JE55_RS04495 2bc69fc9dbf4ff2ebacded2bc40193ea 628 Gene3D G3DSA:1.25.10.10 56 364 2.8E-14 T 22-04-2016 IPR011989 Armadillo-like helical JE55_RS04495 2bc69fc9dbf4ff2ebacded2bc40193ea 628 SUPERFAMILY SSF48371 43 389 2.47E-23 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 JE55_RS16490 914f61871100620bbb8be22247091dfc 90 Pfam PF12778 PXPV repeat (3 copies) 33 55 2.9E-6 T 22-04-2016 IPR024446 PXPV repeat JE55_RS04355 b4e6cb2f0014f6bbcca30d2aa246ca0e 368 PANTHER PTHR22926 6 362 1.7E-91 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS04355 b4e6cb2f0014f6bbcca30d2aa246ca0e 368 PANTHER PTHR22926:SF7 6 362 1.7E-91 T 22-04-2016 JE55_RS04355 b4e6cb2f0014f6bbcca30d2aa246ca0e 368 Pfam PF00953 Glycosyl transferase family 4 77 232 6.1E-28 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 JE55_RS18240 2c17c659bf5f4733361d195bfb24e1a5 231 PANTHER PTHR24220 8 222 6.7E-45 T 22-04-2016 JE55_RS18240 2c17c659bf5f4733361d195bfb24e1a5 231 SUPERFAMILY SSF52540 4 221 1.36E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS18240 2c17c659bf5f4733361d195bfb24e1a5 231 Pfam PF00005 ABC transporter 27 170 9.0E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 JE55_RS18240 2c17c659bf5f4733361d195bfb24e1a5 231 SMART SM00382 33 221 4.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain JE55_RS18240 2c17c659bf5f4733361d195bfb24e1a5 231 Gene3D G3DSA:3.40.50.300 6 222 1.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase JE55_RS02720 1e6bb34effc045c9b3296d2bc9a43aa9 348 TIGRFAM TIGR03476 HpnL: putative membrane protein 3 315 1.7E-115 T 22-04-2016 JE55_RS02720 1e6bb34effc045c9b3296d2bc9a43aa9 348 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 13 306 2.1E-25 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD JE55_RS14225 482f69de6809eb6a5c231ba77c0d9939 880 PANTHER PTHR30287 145 880 6.4E-118 T 22-04-2016 JE55_RS14225 482f69de6809eb6a5c231ba77c0d9939 880 PANTHER PTHR30287 18 119 6.4E-118 T 22-04-2016 JE55_RS14225 482f69de6809eb6a5c231ba77c0d9939 880 Pfam PF02687 FtsX-like permease family 760 871 4.6E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 JE55_RS14225 482f69de6809eb6a5c231ba77c0d9939 880 Pfam PF02687 FtsX-like permease family 308 414 1.1E-9 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 JE55_RS12205 fef36836742a197423eb9da10499f7f2 157 Pfam PF10696 Protein of unknown function (DUF2501) 83 156 9.5E-25 T 22-04-2016 IPR019637 Protein of unknown function DUF2501 JE55_RS05780 d4a89cbd47456d7c03800de1bc5a1d1f 176 Pfam PF02472 Biopolymer transport protein ExbD/TolR 14 135 6.7E-30 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 JE55_RS05780 d4a89cbd47456d7c03800de1bc5a1d1f 176 PANTHER PTHR30558:SF3 13 143 7.4E-36 T 22-04-2016 JE55_RS05780 d4a89cbd47456d7c03800de1bc5a1d1f 176 PANTHER PTHR30558 13 143 7.4E-36 T 22-04-2016 JE55_RS26930 f4a69625f8f2044bb377ae74ccf6b606 138 Pfam PF05400 Flagellar protein FliT 73 137 2.5E-14 T 22-04-2016 IPR008622 Flagellar protein FliT JE55_RS26930 f4a69625f8f2044bb377ae74ccf6b606 138 Gene3D G3DSA:1.20.58.380 58 137 3.4E-27 T 22-04-2016 JE55_RS19505 d0d05c6001f4a5e9804b55de51bab05e 202 Pfam PF08907 Domain of unknown function (DUF1853) 1 190 2.4E-66 T 22-04-2016 IPR015003 Protein of unknown function DUF1853 JE55_RS15100 09e2f849dc656f266944b511c2b4fe04 241 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 3 235 5.0E-81 T 22-04-2016 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 JE55_RS15100 09e2f849dc656f266944b511c2b4fe04 241 SUPERFAMILY SSF52096 11 191 4.26E-17 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS15100 09e2f849dc656f266944b511c2b4fe04 241 Gene3D G3DSA:3.90.226.10 20 192 3.8E-12 T 22-04-2016 IPR029045 ClpP/crotonase-like domain JE55_RS15100 09e2f849dc656f266944b511c2b4fe04 241 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 5 233 1.8E-75 T 22-04-2016 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal GO:0016874 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 JE55_RS14300 4703e7e0c0f0128a8038e6d8b3e0a944 140 Pfam PF12279 Protein of unknown function (DUF3619) 10 137 5.2E-44 T 22-04-2016 IPR022064 Protein of unknown function DUF3619 JE55_RS15630 018097040762844844f8b9cfd94fd54a 197 Pfam PF11745 Protein of unknown function (DUF3304) 25 151 1.5E-35 T 22-04-2016 IPR021733 Protein of unknown function DUF3304 JE55_RS02895 b3dfd3028d3918d13b03173b0cd00130 193 Pfam PF06805 Bacteriophage lambda tail assembly protein I 6 89 3.4E-7 T 22-04-2016 IPR010654 Bacteriophage lambda tail assembly I JE55_RS17855 8df9dea58876bff026d3362f57db69a5 444 Pfam PF00999 Sodium/hydrogen exchanger family 9 400 2.6E-44 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 JE55_RS17855 8df9dea58876bff026d3362f57db69a5 444 PANTHER PTHR32468 5 389 1.6E-72 T 22-04-2016 JE55_RS13150 f53b260fdd0e8b373625873f833b8fe5 245 Pfam PF04402 Protein of unknown function (DUF541) 44 240 7.7E-27 T 22-04-2016 IPR007497 Protein of unknown function DUF541 JE55_RS27030 0f31480d1a84d43623ce069172448441 112 Pfam PF01963 TraB family 18 106 6.5E-11 T 22-04-2016 IPR002816 Pheromone shutdown, TraB JE55_RS07180 d7ac932e44bb3cd58dc5cbd2f55084c2 315 Pfam PF11104 Type IV pilus assembly protein PilM; 16 198 9.1E-7 T 22-04-2016 IPR005883 Type IV pilus assembly protein PilM JE55_RS28065 f860a029cb64ae630657d54cf4244503 171 Pfam PF02104 SURF1 family 6 165 2.2E-27 T 22-04-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 JE55_RS28065 f860a029cb64ae630657d54cf4244503 171 PANTHER PTHR23427:SF2 2 136 3.2E-18 T 22-04-2016 JE55_RS28065 f860a029cb64ae630657d54cf4244503 171 PANTHER PTHR23427 2 136 3.2E-18 T 22-04-2016 JE55_RS01865 1d361b13c3d28cc1caa20d7a6f0d67ee 176 Pfam PF06763 Prophage minor tail protein Z (GPZ) 16 102 2.4E-5 T 22-04-2016 IPR010633 Bacteriophage lambda, GpZ, minor tail JE55_RS32195 5139f291da66ce05f618cc7fe77bbc58 221 ProDom PD028710 PLASMID KORC REPRESSOR TRANSCRIPTIONAL TRANSCRIPTION DNA-BINDING REGULATION KLCC 22 81 2.0E-10 T 22-04-2016 IPR020136 Transcriptional repressor KorC JE55_RS32195 5139f291da66ce05f618cc7fe77bbc58 221 Gene3D G3DSA:3.90.1530.10 144 206 7.1E-4 T 22-04-2016 JE55_RS16420 9ff0eec639185bbd3b6abe5812eeea7c 166 Pfam PF01478 Type IV leader peptidase family 9 112 1.0E-17 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 JE55_RS16420 9ff0eec639185bbd3b6abe5812eeea7c 166 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 93 108 6.3E-6 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- JE55_RS16420 9ff0eec639185bbd3b6abe5812eeea7c 166 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 81 92 6.3E-6 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- JE55_RS16420 9ff0eec639185bbd3b6abe5812eeea7c 166 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 17 34 6.3E-6 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- JE55_RS21550 0f990712ee37af017ae36a1dfcc3a291 85 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 10 84 3.8E-15 T 22-04-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain JE55_RS01795 ec9718951f7dbb69d831787e3bce81cd 68 Pfam PF05489 Phage Tail Protein X 5 58 1.7E-19 T 22-04-2016 IPR008861 Phage Tail Protein X-like JE55_RS04590 51a66c0886e2cfcd61397ef68036e5e3 122 Pfam PF04972 BON domain 60 121 5.5E-16 T 22-04-2016 IPR007055 BON domain JE55_RS01635 ed9d8074ae4bce2c73d17a8b42c3658f 409 Gene3D G3DSA:1.20.1250.20 17 185 8.9E-6 T 22-04-2016 JE55_RS01635 ed9d8074ae4bce2c73d17a8b42c3658f 409 SUPERFAMILY SSF103473 26 388 1.31E-13 T 22-04-2016 IPR020846 Major facilitator superfamily domain JE55_RS18055 33a3531c8af65acef245776ca3689f3e 120 Pfam PF11226 Protein of unknown function (DUF3022) 13 116 5.2E-51 T 22-04-2016 IPR021389 Protein of unknown function DUF3022 JE55_RS06065 30a12e08d706a65aa216f15c8833ef6b 299 PANTHER PTHR38034 22 295 2.8E-33 T 22-04-2016 JE55_RS06065 30a12e08d706a65aa216f15c8833ef6b 299 Pfam PF01578 Cytochrome C assembly protein 61 293 1.1E-23 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 JE55_RS02610 462a6c438d7c231641527eb3f9650381 99 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 9 76 2.6E-29 T 22-04-2016 IPR018720 Domain of unknown function DUF2249 JE55_RS16480 446bcff1bbe75413b53cb65a89e43507 237 Pfam PF11180 Protein of unknown function (DUF2968) 56 230 1.5E-68 T 22-04-2016 IPR021350 Protein of unknown function DUF2968 JE55_RS16665 395108d09c7b7cddd606a7ac8d02ac0a 65 Gene3D G3DSA:1.10.10.10 33 65 3.8E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain JE55_RS10375 4a63d27c2a90849bfd2de7b76b45ca25 282 Pfam PF05036 Sporulation related domain 204 278 1.7E-17 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 JE55_RS10375 4a63d27c2a90849bfd2de7b76b45ca25 282 Gene3D G3DSA:3.30.70.1070 202 281 1.4E-26 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 JE55_RS10375 4a63d27c2a90849bfd2de7b76b45ca25 282 SUPERFAMILY SSF110997 203 280 5.36E-18 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 JE55_RS14825 7a8e448ca90241afd69035e17c0c3b27 70 ProDom PD052686 LIPOPROTEIN INDUCIBLE OSMOTICALLY B PRECURSOR SIGNAL MEMBRANE PALMITATE TRANSMEMBRANE SURFACE 12 70 2.0E-4 T 22-04-2016 JE55_RS14825 7a8e448ca90241afd69035e17c0c3b27 70 Pfam PF05433 Glycine zipper 2TM domain 33 69 5.9E-6 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 JE55_RS16530 a2ddda7667e78af5e3cc3fc1a79bd4bf 528 SUPERFAMILY SSF53187 64 110 8.13E-11 T 22-04-2016 JE55_RS16530 a2ddda7667e78af5e3cc3fc1a79bd4bf 528 SUPERFAMILY SSF53187 289 508 8.13E-11 T 22-04-2016 JE55_RS16530 a2ddda7667e78af5e3cc3fc1a79bd4bf 528 Gene3D G3DSA:3.40.630.10 293 510 2.1E-13 T 22-04-2016 JE55_RS16530 a2ddda7667e78af5e3cc3fc1a79bd4bf 528 Gene3D G3DSA:3.40.630.10 76 117 2.1E-13 T 22-04-2016 JE55_RS16530 a2ddda7667e78af5e3cc3fc1a79bd4bf 528 Pfam PF02225 PA domain 159 269 9.6E-6 T 22-04-2016 IPR003137 PA domain JE55_RS30210 2e4743ebf845441039eeeb0d5f7abd1a 183 Pfam PF13441 YMGG-like Gly-zipper 115 156 8.3E-8 T 22-04-2016 IPR027367 YMGG-like Gly-zipper JE55_RS08845 a246a4c5afb7b037a04dd8dfd112e4b0 349 PANTHER PTHR30482 1 344 1.3E-35 T 22-04-2016 JE55_RS08845 a246a4c5afb7b037a04dd8dfd112e4b0 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 318 1.9E-24 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 JE55_RS09685 5be1199a1d17f627fe6f4017525ba553 250 PANTHER PTHR41293 2 242 9.9E-94 T 22-04-2016 JE55_RS09685 5be1199a1d17f627fe6f4017525ba553 250 PANTHER PTHR41293:SF1 2 242 9.9E-94 T 22-04-2016 JE55_RS09685 5be1199a1d17f627fe6f4017525ba553 250 Pfam PF06149 Protein of unknown function (DUF969) 7 224 1.9E-88 T 22-04-2016 IPR010374 Protein of unknown function DUF969 JE55_RS18035 0bbb7eaf34947bca76bcb4fc8665ad76 171 Pfam PF07813 LTXXQ motif family protein 46 137 4.0E-12 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 JE55_RS12570 eed160d6fc2e1ae8c200542aa2b75a3f 525 PANTHER PTHR30348 156 449 1.0E-24 T 22-04-2016 JE55_RS12570 eed160d6fc2e1ae8c200542aa2b75a3f 525 Pfam PF01904 Protein of unknown function DUF72 243 511 4.5E-43 T 22-04-2016 IPR002763 Protein of unknown function DUF72 JE55_RS12570 eed160d6fc2e1ae8c200542aa2b75a3f 525 Gene3D G3DSA:3.20.20.410 211 513 1.2E-72 T 22-04-2016 IPR002763 Protein of unknown function DUF72 JE55_RS12570 eed160d6fc2e1ae8c200542aa2b75a3f 525 SUPERFAMILY SSF117396 221 512 2.09E-51 T 22-04-2016 IPR002763 Protein of unknown function DUF72 JE55_RS10525 070eb2b7bcab100cf5719e32e04524f9 108 Pfam PF11142 Protein of unknown function (DUF2917) 10 67 1.0E-19 T 22-04-2016 IPR021317 Protein of unknown function DUF2917 JE55_RS01575 864a27c3f62712e54136511114333c64 259 Pfam PF14305 TupA-like ATPgrasp 40 259 6.8E-15 T 22-04-2016 IPR029465 TupA-like ATPgrasp protein JE55_RS05945 c7442b21ad268970e97c599677d97b5a 337 Pfam PF05035 2-keto-3-deoxy-galactonokinase 14 319 1.4E-99 T 22-04-2016 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130|UniPathway: UPA00081 JE55_RS13670 ce158710f22f8093fe3452b44745b729 152 Pfam PF05425 Copper resistance protein D 48 147 7.7E-16 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 JE55_RS09675 6a8a85b178aded98f110fdbd2567e655 382 PANTHER PTHR40590 84 380 4.3E-20 T 22-04-2016 JE55_RS09675 6a8a85b178aded98f110fdbd2567e655 382 Pfam PF01963 TraB family 111 380 7.7E-51 T 22-04-2016 IPR002816 Pheromone shutdown, TraB JE55_RS15395 173d580fc405fe59283af36cfca3f74b 237 Pfam PF15579 Immunity protein 52 132 231 3.0E-36 T 22-04-2016 IPR028969 Immunity protein 52 JE55_RS15395 173d580fc405fe59283af36cfca3f74b 237 PIRSF PIRSF029636 1 237 5.4E-111 T 22-04-2016 IPR016929 Uncharacterised conserved protein UCP029636 JE55_RS04525 18ae9f42d85b98098906f989de4b927e 417 Pfam PF11170 Protein of unknown function (DUF2957) 64 414 1.8E-144 T 22-04-2016 IPR021340 Protein of unknown function DUF2957 JE55_RS09010 ead49e3d769e35055d13fd0bb76971f4 139 SUPERFAMILY SSF47413 45 85 1.63E-5 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS09010 ead49e3d769e35055d13fd0bb76971f4 139 Gene3D G3DSA:1.10.260.40 45 83 3.3E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS28845 57f35d6af6aa303df5a6db1747bc8eb6 295 Pfam PF04453 Organic solvent tolerance protein 5 280 1.1E-75 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 JE55_RS05070 fc87baffb3db68a29ee581586988180c 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 3.9E-31 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS05070 fc87baffb3db68a29ee581586988180c 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 108 133 3.9E-31 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS05070 fc87baffb3db68a29ee581586988180c 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 142 166 3.9E-31 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS05070 fc87baffb3db68a29ee581586988180c 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 65 87 3.9E-31 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS05070 fc87baffb3db68a29ee581586988180c 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 179 198 3.9E-31 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS05070 fc87baffb3db68a29ee581586988180c 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 34 55 3.9E-31 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 JE55_RS05070 fc87baffb3db68a29ee581586988180c 260 Pfam PF01061 ABC-2 type transporter 14 222 7.0E-22 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 JE55_RS02540 4063841f2bffe49b982ae130278a3ab2 295 Pfam PF01136 Peptidase family U32 81 275 1.1E-12 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- JE55_RS02540 4063841f2bffe49b982ae130278a3ab2 295 PANTHER PTHR30217:SF8 1 291 9.1E-73 T 22-04-2016 JE55_RS02540 4063841f2bffe49b982ae130278a3ab2 295 PANTHER PTHR30217 1 291 9.1E-73 T 22-04-2016 JE55_RS03620 da58e8c1dd4264f0285a7f8e658290bd 198 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 123 180 7.9E-16 T 22-04-2016 IPR018637 Domain of unknown function DUF2059 JE55_RS07980 14c87fe6e6ee4d553af9c33b19593df6 106 Pfam PF05247 Flagellar transcriptional activator (FlhD) 4 103 6.2E-43 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 JE55_RS07980 14c87fe6e6ee4d553af9c33b19593df6 106 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 2 105 28.633 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 JE55_RS07980 14c87fe6e6ee4d553af9c33b19593df6 106 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 11 98 2.0E-37 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 JE55_RS07980 14c87fe6e6ee4d553af9c33b19593df6 106 SUPERFAMILY SSF63592 4 99 3.14E-36 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 JE55_RS05640 7a9c0c24477dae510dfc21900d35e15a 280 Pfam PF11227 Protein of unknown function (DUF3025) 67 275 7.7E-83 T 22-04-2016 IPR021390 Protein of unknown function DUF3025 JE55_RS02335 6334ab3f071345c24d8ad1558a0148a5 329 Pfam PF04116 Fatty acid hydroxylase superfamily 139 278 1.1E-30 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 JE55_RS10200 41d08f10417f3b310c14871df4e16e5a 169 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 15 75 1.0E-12 T 22-04-2016 IPR025161 Putative transposase IS4/IS5 family JE55_RS12045 f2440ff073cd6177957933a908f2a681 288 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 56 225 1.4E-26 T 22-04-2016 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 JE55_RS23265 097131b89414e112dae40064b96e61a2 315 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 126 312 1.6E-70 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 JE55_RS06550 498a278c3d8fb62b1b6c4dc7aba09dcc 100 Pfam PF12587 Protein of unknown function (DUF3761) 14 100 6.7E-39 T 22-04-2016 IPR022236 Protein of unknown function DUF3761 JE55_RS17465 185393995c882ccdd2be9bea75e8ad88 103 Pfam PF10908 Protein of unknown function (DUF2778) 2 91 4.7E-23 T 22-04-2016 IPR021225 Protein of unknown function DUF2778 JE55_RS18150 ec70ef6e41987ca938787a6aa77f9702 187 Pfam PF11188 Protein of unknown function (DUF2975) 68 182 4.0E-14 T 22-04-2016 IPR021354 Protein of unknown function DUF2975 JE55_RS21775 f341168b0e2ef03830ca3a486a91cbfc 166 Pfam PF07722 Peptidase C26 97 162 2.1E-4 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 JE55_RS09165 fc9a2a30c526d051f23267a34b391cfb 160 Pfam PF10908 Protein of unknown function (DUF2778) 24 149 5.4E-39 T 22-04-2016 IPR021225 Protein of unknown function DUF2778 JE55_RS15005 044b67dda37a1432aa4803721e10d555 135 Pfam PF06073 Bacterial protein of unknown function (DUF934) 31 131 7.5E-35 T 22-04-2016 IPR008318 Uncharacterised conserved protein UCP030820 JE55_RS08305 22b60f3f036a21f2129b74d1b3140508 487 Pfam PF05552 Conserved TM helix 6 53 5.5E-13 T 22-04-2016 IPR008910 Conserved TM helix JE55_RS08305 22b60f3f036a21f2129b74d1b3140508 487 Pfam PF05552 Conserved TM helix 96 144 4.8E-11 T 22-04-2016 IPR008910 Conserved TM helix JE55_RS08305 22b60f3f036a21f2129b74d1b3140508 487 Pfam PF05552 Conserved TM helix 187 234 6.4E-15 T 22-04-2016 IPR008910 Conserved TM helix JE55_RS08305 22b60f3f036a21f2129b74d1b3140508 487 Pfam PF05552 Conserved TM helix 279 325 2.2E-12 T 22-04-2016 IPR008910 Conserved TM helix JE55_RS14875 0ec9da523f1520ed05a3430a714e7929 250 Pfam PF03988 Repeat of Unknown Function (DUF347) 185 234 1.4E-14 T 22-04-2016 IPR007136 Protein of unknown function DUF347 JE55_RS14875 0ec9da523f1520ed05a3430a714e7929 250 Pfam PF03988 Repeat of Unknown Function (DUF347) 11 61 2.0E-14 T 22-04-2016 IPR007136 Protein of unknown function DUF347 JE55_RS14875 0ec9da523f1520ed05a3430a714e7929 250 Pfam PF03988 Repeat of Unknown Function (DUF347) 66 117 1.3E-13 T 22-04-2016 IPR007136 Protein of unknown function DUF347 JE55_RS14875 0ec9da523f1520ed05a3430a714e7929 250 Pfam PF03988 Repeat of Unknown Function (DUF347) 131 175 5.6E-9 T 22-04-2016 IPR007136 Protein of unknown function DUF347 JE55_RS16900 e5030b6b5bc85e6adbfc4bce92d48d58 142 Pfam PF07811 TadE-like protein 13 55 6.3E-11 T 22-04-2016 IPR012495 TadE-like JE55_RS08110 689b7f5f044ed8afd9aa9e05fd3510db 142 Pfam PF16068 Domain of unknown function (DUF4810) 31 114 1.9E-33 T 22-04-2016 IPR014508 Uncharacterised conserved protein withTPR-like repeats JE55_RS03945 882340a7d9f54e3b95b6629dc1d99052 139 Pfam PF12779 YXWGXW repeat (2 copies) 86 110 9.1E-9 T 22-04-2016 IPR024447 YXWGXW repeat JE55_RS03945 882340a7d9f54e3b95b6629dc1d99052 139 Pfam PF12779 YXWGXW repeat (2 copies) 116 139 4.8E-5 T 22-04-2016 IPR024447 YXWGXW repeat JE55_RS17480 21a76afe8076f16c9009243ffe2a3505 259 Pfam PF09836 Putative DNA-binding domain 15 101 1.6E-20 T 22-04-2016 IPR018640 Putative DNA-binding domain, bacteria JE55_RS08295 8b6d5431e88d6ea6fa2cf19a21c7152e 392 Pfam PF01757 Acyltransferase family 4 352 3.1E-24 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 JE55_RS10205 33c8102b363529e997011946be4b12df 198 Pfam PF12306 Inclusion body protein 23 190 1.9E-38 T 22-04-2016 IPR021087 Uncharacterised protein family PixA/AidA JE55_RS11890 d0e745c1be66a1fc67125fa9221145f5 151 Pfam PF14302 Domain of unknown function (DUF4377) 50 123 1.5E-21 T 22-04-2016 IPR025485 Domain of unknown function DUF4377 JE55_RS08895 29d33366df2347d99d7f3dd42e1b3ca5 328 Pfam PF00487 Fatty acid desaturase 59 317 7.7E-40 T 22-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 JE55_RS09185 a09b850028d58bd40766ba9446aecbcc 289 SUPERFAMILY SSF52151 165 284 3.66E-28 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 JE55_RS09185 a09b850028d58bd40766ba9446aecbcc 289 SUPERFAMILY SSF52151 5 125 3.66E-28 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 JE55_RS09185 a09b850028d58bd40766ba9446aecbcc 289 Pfam PF01734 Patatin-like phospholipase 6 208 3.7E-20 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 JE55_RS13125 7916badaa2ff15b6f0c026ce127ff70c 236 Pfam PF10667 Protein of unknown function (DUF2486) 2 229 2.8E-87 T 22-04-2016 IPR018924 Protein of unknown function DUF2486 JE55_RS09245 abe1a9b2a2d73cee924aa79358c1b4b4 196 Pfam PF14334 Domain of unknown function (DUF4390) 31 187 3.3E-58 T 22-04-2016 IPR025500 Protein of unknown function DUF4390 JE55_RS15975 2e766434b343c26bd66ad201204bd151 205 Pfam PF13590 Domain of unknown function (DUF4136) 34 173 3.0E-11 T 22-04-2016 IPR025411 Domain of unknown function DUF4136 JE55_RS04965 a8d67053ce39cb0c736c60ae11eed050 390 Gene3D G3DSA:2.120.10.10 29 348 2.1E-26 T 22-04-2016 IPR011040 Sialidases JE55_RS04965 a8d67053ce39cb0c736c60ae11eed050 390 SUPERFAMILY SSF50939 34 347 2.26E-22 T 22-04-2016 IPR011040 Sialidases JE55_RS01900 3da0673510ffd40a6b71eddfbff35ea7 703 Pfam PF05876 Phage terminase large subunit (GpA) 44 622 4.7E-159 T 22-04-2016 IPR008866 Bacteriophage lambda, GpA JE55_RS09570 a7852c99f832d7dfe3f9e8b74d2f9554 504 Pfam PF02120 Flagellar hook-length control protein FliK 365 435 6.5E-11 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal JE55_RS00845 034683ab48c4074a0d7c3353016bbaff 471 Pfam PF08811 Protein of unknown function (DUF1800) 17 470 1.2E-116 T 22-04-2016 IPR014917 Protein of unknown function DUF1800 JE55_RS15000 3f92e902cbacc20effafbf43dc834ec2 463 Pfam PF10001 Uncharacterized protein conserved in bacteria (DUF2242) 55 175 2.0E-52 T 22-04-2016 IPR018718 Protein of unknown function DUF2242 JE55_RS06040 46e7ff729309b5fade491869337d9ddb 193 Pfam PF07382 Histone H1-like nucleoprotein HC2 1 192 1.1E-37 T 22-04-2016 IPR009970 Histone H1-like nucleoprotein HC2 GO:0003677|GO:0030261 JE55_RS02995 4ac1383dc836f1ee532f0df7924825f7 61 Gene3D G3DSA:1.10.260.40 19 55 2.1E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 JE55_RS05005 82140b6da2e3939c1c51d9ef83e5de26 400 Pfam PF05159 Capsule polysaccharide biosynthesis protein 73 380 4.2E-132 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 JE55_RS10030 b9bac2eb90561a2570984d6973858ba6 64 Pfam PF11146 Protein of unknown function (DUF2905) 3 64 8.8E-17 T 22-04-2016 IPR021320 Protein of unknown function DUF2905 JE55_RS00495 a40dcfd68692f33ba6d63543ecc94617 96 Pfam PF07769 psiF repeat 24 53 3.0E-15 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat JE55_RS00495 a40dcfd68692f33ba6d63543ecc94617 96 Pfam PF07769 psiF repeat 61 91 2.5E-15 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat JE55_RS16855 1417aabe9a92d422dfd1e518613776a5 159 Pfam PF01478 Type IV leader peptidase family 8 109 9.7E-6 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 JE55_RS02575 b030157e75ce759a9e365ed193a640c5 398 Pfam PF05940 NnrS protein 18 392 2.3E-107 T 22-04-2016 IPR010266 NnrS JE55_RS11380 a9bd21fa5ab8326e30bac508db7f4179 422 Pfam PF01943 Polysaccharide biosynthesis protein 5 273 1.4E-30 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 JE55_RS12115 768ecb22a0cbd5301a70db5155b445cc 230 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 113 171 1.1E-5 T 22-04-2016 IPR024534 Domain of unknown function DUF2220