locus-tag class description X993_RS00010 PF02492 CobW/HypB/UreG, nucleotide-binding domain X993_RS00010 PF07683 Cobalamin synthesis protein cobW C-terminal domain X993_RS00015 PF03824 High-affinity nickel-transport protein X993_RS00020 PF01890 Cobalamin synthesis G C-terminus X993_RS00025 PF12557 Cob(I)alamin adenosyltransferase N terminal X993_RS00025 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP X993_RS00030 PF07685 CobB/CobQ-like glutamine amidotransferase domain X993_RS00030 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain X993_RS00040 PF00551 Formyl transferase X993_RS00045 PF00593 TonB dependent receptor X993_RS00045 PF07715 TonB-dependent Receptor Plug Domain X993_RS00050 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) X993_RS00055 PF00501 AMP-binding enzyme X993_RS00055 PF13193 AMP-binding enzyme C-terminal domain X993_RS00055 PF00668 Condensation domain X993_RS00055 PF00550 Phosphopantetheine attachment site X993_RS00060 PF00668 Condensation domain X993_RS00060 PF13193 AMP-binding enzyme C-terminal domain X993_RS00060 PF00501 AMP-binding enzyme X993_RS00060 PF00550 Phosphopantetheine attachment site X993_RS00065 PF00005 ABC transporter X993_RS00065 PF00664 ABC transporter transmembrane region X993_RS00075 PF01497 Periplasmic binding protein X993_RS00085 PF01032 FecCD transport family X993_RS00090 PF00005 ABC transporter X993_RS00095 PF02668 Taurine catabolism dioxygenase TauD, TfdA family X993_RS00100 PF03621 MbtH-like protein X993_RS00120 PF02782 FGGY family of carbohydrate kinases, C-terminal domain X993_RS00120 PF00370 FGGY family of carbohydrate kinases, N-terminal domain X993_RS00125 PF08240 Alcohol dehydrogenase GroES-like domain X993_RS00125 PF00107 Zinc-binding dehydrogenase X993_RS00130 PF02653 Branched-chain amino acid transport system / permease component X993_RS00135 PF00005 ABC transporter X993_RS00140 PF13407 Periplasmic binding protein domain X993_RS00160 PF00664 ABC transporter transmembrane region X993_RS00160 PF00005 ABC transporter X993_RS00160 PF08021 Siderophore-interacting FAD-binding domain X993_RS00160 PF04954 Siderophore-interacting protein X993_RS00170 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain X993_RS00170 PF02753 Pili assembly chaperone PapD, C-terminal domain X993_RS00175 PF13954 PapC N-terminal domain X993_RS00175 PF13953 PapC C-terminal domain X993_RS00175 PF00577 Outer membrane usher protein X993_RS00180 PF00419 Fimbrial protein X993_RS00190 PF02321 Outer membrane efflux protein X993_RS00195 PF00873 AcrB/AcrD/AcrF family X993_RS00200 PF00529 HlyD membrane-fusion protein of T1SS X993_RS00200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion X993_RS00205 PF08361 MAATS-type transcriptional repressor, C-terminal region X993_RS00205 PF00440 Bacterial regulatory proteins, tetR family X993_RS00210 PF01551 Peptidase family M23 X993_RS00210 PF01476 LysM domain X993_RS00210 PF08525 Opacity-associated protein A N-terminal motif X993_RS00215 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS00220 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS00235 PF00497 Bacterial extracellular solute-binding proteins, family 3 X993_RS00265 PF00437 Type II/IV secretion system protein X993_RS00280 PF04972 BON domain X993_RS00280 PF13629 Pilus formation protein N terminal region X993_RS00280 PF00263 Bacterial type II and III secretion system protein X993_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS00305 PF00005 ABC transporter X993_RS00320 PF00083 Sugar (and other) transporter X993_RS00325 PF04293 SpoVR like protein X993_RS00330 PF04285 Protein of unknown function (DUF444) X993_RS00335 PF06798 PrkA serine protein kinase C-terminal domain X993_RS00335 PF08298 PrkA AAA domain X993_RS00340 PF02203 Tar ligand binding domain homologue X993_RS00340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS00340 PF00672 HAMP domain X993_RS00345 PF00294 pfkB family carbohydrate kinase X993_RS00350 PF00356 Bacterial regulatory proteins, lacI family X993_RS00355 PF02653 Branched-chain amino acid transport system / permease component X993_RS00360 PF00005 ABC transporter X993_RS00365 PF13407 Periplasmic binding protein domain X993_RS00370 PF03466 LysR substrate binding domain X993_RS00370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS00375 PF12857 TOBE-like domain X993_RS00375 PF00005 ABC transporter X993_RS00380 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS00385 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS00395 PF01726 LexA DNA binding domain X993_RS00395 PF00717 Peptidase S24-like X993_RS00415 PF00005 ABC transporter X993_RS00420 PF01061 ABC-2 type transporter X993_RS00430 PF03773 Predicted permease X993_RS00435 PF00248 Aldo/keto reductase family X993_RS00445 PF01638 HxlR-like helix-turn-helix X993_RS00460 PF00375 Sodium:dicarboxylate symporter family X993_RS00465 PF01207 Dihydrouridine synthase (Dus) X993_RS00485 PF03459 TOBE domain X993_RS00490 PF00005 ABC transporter X993_RS00495 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS00500 PF00296 Luciferase-like monooxygenase X993_RS00515 PF00378 Enoyl-CoA hydratase/isomerase X993_RS00520 PF00893 Small Multidrug Resistance protein X993_RS00525 PF03928 Haem-degrading X993_RS00535 PF09297 NADH pyrophosphatase zinc ribbon domain X993_RS00535 PF00293 NUDIX domain X993_RS00540 PF03588 Leucyl/phenylalanyl-tRNA protein transferase X993_RS00545 PF04376 Arginine-tRNA-protein transferase, N terminus X993_RS00545 PF04377 Arginine-tRNA-protein transferase, C terminus X993_RS00550 PF01180 Dihydroorotate dehydrogenase X993_RS00555 PF00497 Bacterial extracellular solute-binding proteins, family 3 X993_RS00560 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS00575 PF07729 FCD domain X993_RS00575 PF00392 Bacterial regulatory proteins, gntR family X993_RS00580 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) X993_RS00585 PF01510 N-acetylmuramoyl-L-alanine amidase X993_RS00595 PF00588 SpoU rRNA Methylase family X993_RS00595 PF08032 RNA 2'-O ribose methyltransferase substrate binding X993_RS00600 PF00575 S1 RNA binding domain X993_RS00600 PF00773 RNB domain X993_RS00600 PF08206 Ribonuclease B OB domain X993_RS00600 PF17876 Cold shock domain X993_RS00600 PF08461 Ribonuclease R winged-helix domain X993_RS00615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS00615 PF00672 HAMP domain X993_RS00615 PF02203 Tar ligand binding domain homologue X993_RS00620 PF04185 Phosphoesterase family X993_RS00630 PF00916 Sulfate permease family X993_RS00630 PF01740 STAS domain X993_RS00640 PF13302 Acetyltransferase (GNAT) domain X993_RS00640 PF00117 Glutamine amidotransferase class-I X993_RS00640 PF00958 GMP synthase C terminal domain X993_RS00640 PF03352 Methyladenine glycosylase X993_RS00640 PF13673 Acetyltransferase (GNAT) domain X993_RS00645 PF07690 Major Facilitator Superfamily X993_RS00650 PF00440 Bacterial regulatory proteins, tetR family X993_RS00655 PF00501 AMP-binding enzyme X993_RS00655 PF13193 AMP-binding enzyme C-terminal domain X993_RS00670 PF17209 Hfq protein X993_RS00680 PF06490 Flagellar regulatory protein FleQ X993_RS00680 PF02954 Bacterial regulatory protein, Fis family X993_RS00680 PF00158 Sigma-54 interaction domain X993_RS00710 PF00437 Type II/IV secretion system protein X993_RS00720 PF13629 Pilus formation protein N terminal region X993_RS00720 PF00263 Bacterial type II and III secretion system protein X993_RS00720 PF04972 BON domain X993_RS00775 PF03969 AFG1-like ATPase X993_RS00780 PF07992 Pyridine nucleotide-disulphide oxidoreductase X993_RS00780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain X993_RS00785 PF02817 e3 binding domain X993_RS00785 PF00364 Biotin-requiring enzyme X993_RS00785 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) X993_RS00790 PF16078 2-oxoglutarate dehydrogenase N-terminus X993_RS00790 PF00676 Dehydrogenase E1 component X993_RS00790 PF16870 2-oxoglutarate dehydrogenase C-terminal X993_RS00790 PF02779 Transketolase, pyrimidine binding domain X993_RS00795 PF00009 Elongation factor Tu GTP binding domain X993_RS00795 PF03144 Elongation factor Tu domain 2 X993_RS00795 PF00679 Elongation factor G C-terminus X993_RS00800 PF01047 MarR family X993_RS00805 PF02321 Outer membrane efflux protein X993_RS00810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion X993_RS00810 PF00529 HlyD membrane-fusion protein of T1SS X993_RS00815 PF07690 Major Facilitator Superfamily X993_RS00820 PF09157 Pseudouridine synthase II TruB, C-terminal X993_RS00820 PF16198 tRNA pseudouridylate synthase B C-terminal domain X993_RS00820 PF01509 TruB family pseudouridylate synthase (N terminal domain) X993_RS00825 PF02033 Ribosome-binding factor A X993_RS00830 PF04760 Translation initiation factor IF-2, N-terminal region X993_RS00830 PF00009 Elongation factor Tu GTP binding domain X993_RS00830 PF08364 Bacterial translation initiation factor IF-2 associated region X993_RS00830 PF11987 Translation-initiation factor 2 X993_RS00835 PF13184 NusA-like KH domain X993_RS00835 PF08529 NusA N-terminal domain X993_RS00840 PF02576 RimP N-terminal domain X993_RS00840 PF17384 RimP C-terminal SH3 domain X993_RS00845 PF00849 RNA pseudouridylate synthase X993_RS00845 PF01479 S4 domain X993_RS00850 PF04079 Segregation and condensation complex subunit ScpB X993_RS00855 PF03466 LysR substrate binding domain X993_RS00855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS00895 PF06804 NlpB/DapX lipoprotein X993_RS00915 PF01757 Acyltransferase family X993_RS00930 PF00216 Bacterial DNA-binding protein X993_RS00935 PF03484 tRNA synthetase B5 domain X993_RS00935 PF03483 B3/4 domain X993_RS00935 PF03147 Ferredoxin-fold anticodon binding domain X993_RS00935 PF01588 Putative tRNA binding domain X993_RS00935 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain X993_RS00940 PF01409 tRNA synthetases class II core domain (F) X993_RS00940 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain X993_RS00945 PF00453 Ribosomal protein L20 X993_RS00950 PF01632 Ribosomal protein L35 X993_RS00955 PF05198 Translation initiation factor IF-3, N-terminal domain X993_RS00955 PF00707 Translation initiation factor IF-3, C-terminal domain X993_RS00960 PF02824 TGS domain X993_RS00960 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain X993_RS00960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) X993_RS00960 PF03129 Anticodon binding domain X993_RS00970 PF04607 Region found in RelA / SpoT proteins X993_RS00970 PF13291 ACT domain X993_RS00970 PF02824 TGS domain X993_RS00975 PF01042 Endoribonuclease L-PSP X993_RS00980 PF12146 Serine aminopeptidase, S33 X993_RS00990 PF03466 LysR substrate binding domain X993_RS00990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS01010 PF01144 Coenzyme A transferase X993_RS01015 PF01144 Coenzyme A transferase X993_RS01055 PF00665 Integrase core domain X993_RS01055 PF13333 Integrase core domain X993_RS01055 PF13276 HTH-like domain X993_RS01060 PF01264 Chorismate synthase X993_RS01070 PF07690 Major Facilitator Superfamily X993_RS01085 PF03631 Virulence factor BrkB X993_RS01090 PF03358 NADPH-dependent FMN reductase X993_RS01100 PF02913 FAD linked oxidases, C-terminal domain X993_RS01100 PF01565 FAD binding domain X993_RS01115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS01115 PF03466 LysR substrate binding domain X993_RS01120 PF02321 Outer membrane efflux protein X993_RS01125 PF04632 Fusaric acid resistance protein family X993_RS01135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion X993_RS01140 PF02203 Tar ligand binding domain homologue X993_RS01140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS01140 PF00672 HAMP domain X993_RS01145 PF07690 Major Facilitator Superfamily X993_RS01150 PF01048 Phosphorylase superfamily X993_RS01155 PF13361 UvrD-like helicase C-terminal domain X993_RS01155 PF00580 UvrD/REP helicase N-terminal domain X993_RS01160 PF08264 Anticodon-binding domain of tRNA X993_RS01160 PF10458 Valyl tRNA synthetase tRNA binding arm X993_RS01160 PF00133 tRNA synthetases class I (I, L, M and V) X993_RS01165 PF00483 Nucleotidyl transferase X993_RS01175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS01175 PF00672 HAMP domain X993_RS01175 PF14827 Double sensory domain of two-component sensor kinase X993_RS01175 PF00512 His Kinase A (phospho-acceptor) domain X993_RS01175 PF13426 PAS domain X993_RS01185 PF00486 Transcriptional regulatory protein, C terminal X993_RS01185 PF00072 Response regulator receiver domain X993_RS01195 PF01206 Sulfurtransferase TusA X993_RS01200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold X993_RS01200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain X993_RS01205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold X993_RS01205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain X993_RS01210 PF01418 Helix-turn-helix domain, rpiR family X993_RS01210 PF01380 SIS domain X993_RS01220 PF02653 Branched-chain amino acid transport system / permease component X993_RS01225 PF00005 ABC transporter X993_RS01230 PF00294 pfkB family carbohydrate kinase X993_RS01235 PF00205 Thiamine pyrophosphate enzyme, central domain X993_RS01235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X993_RS01235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X993_RS01240 PF01261 Xylose isomerase-like TIM barrel X993_RS01245 PF04962 KduI/IolB family X993_RS01250 PF00005 ABC transporter X993_RS01255 PF12399 Branched-chain amino acid ATP-binding cassette transporter X993_RS01255 PF00005 ABC transporter X993_RS01260 PF02653 Branched-chain amino acid transport system / permease component X993_RS01265 PF03061 Thioesterase superfamily X993_RS01270 PF00465 Iron-containing alcohol dehydrogenase X993_RS01275 PF01906 Putative heavy-metal-binding X993_RS01280 PF09297 NADH pyrophosphatase zinc ribbon domain X993_RS01280 PF00293 NUDIX domain X993_RS01290 PF13180 PDZ domain X993_RS01290 PF17820 PDZ domain X993_RS01295 PF06779 Uncharacterised MFS-type transporter YbfB X993_RS01300 PF03466 LysR substrate binding domain X993_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS01305 PF02272 DHHA1 domain X993_RS01305 PF01411 tRNA synthetases class II (A) X993_RS01305 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain X993_RS01310 PF02515 CoA-transferase family III X993_RS01320 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain X993_RS01320 PF00749 tRNA synthetases class I (E and Q), catalytic domain X993_RS01325 PF00293 NUDIX domain X993_RS01335 PF00933 Glycosyl hydrolase family 3 N terminal domain X993_RS01345 PF00034 Cytochrome c X993_RS01345 PF03150 Di-haem cytochrome c peroxidase X993_RS01350 PF04185 Phosphoesterase family X993_RS01350 PF05506 Domain of unknown function (DUF756) X993_RS01355 PF07055 Enoyl reductase FAD binding domain X993_RS01355 PF12241 Trans-2-enoyl-CoA reductase catalytic region X993_RS01355 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase X993_RS01360 PF00529 HlyD membrane-fusion protein of T1SS X993_RS01360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion X993_RS01365 PF07690 Major Facilitator Superfamily X993_RS01370 PF02321 Outer membrane efflux protein X993_RS01375 PF00196 Bacterial regulatory proteins, luxR family X993_RS01375 PF00072 Response regulator receiver domain X993_RS01380 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) X993_RS01380 PF00072 Response regulator receiver domain X993_RS01380 PF00672 HAMP domain X993_RS01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS01380 PF01627 Hpt domain X993_RS01380 PF00512 His Kinase A (phospho-acceptor) domain X993_RS01415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS01415 PF03466 LysR substrate binding domain X993_RS01420 PF07690 Major Facilitator Superfamily X993_RS01425 PF04909 Amidohydrolase X993_RS01445 PF01566 Natural resistance-associated macrophage protein X993_RS01450 PF01527 Transposase X993_RS01455 PF13683 Integrase core domain X993_RS01455 PF13276 HTH-like domain X993_RS01460 PF00872 Transposase, Mutator family X993_RS01505 PF04717 Type VI secretion system, phage-baseplate injector X993_RS01535 PF13296 Putative type VI secretion system Rhs element Vgr X993_RS01535 PF04717 Type VI secretion system, phage-baseplate injector X993_RS01535 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) X993_RS01560 PF04717 Type VI secretion system, phage-baseplate injector X993_RS01625 PF01389 OmpA-like transmembrane domain X993_RS01625 PF00691 OmpA family X993_RS01630 PF05662 Coiled stalk of trimeric autotransporter adhesin X993_RS01630 PF03895 YadA-like membrane anchor domain X993_RS01630 PF05658 Head domain of trimeric autotransporter adhesin X993_RS01640 PF00486 Transcriptional regulatory protein, C terminal X993_RS01640 PF00072 Response regulator receiver domain X993_RS01655 PF05666 Fels-1 Prophage Protein-like X993_RS01665 PF00072 Response regulator receiver domain X993_RS01665 PF00486 Transcriptional regulatory protein, C terminal X993_RS01670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS01670 PF03466 LysR substrate binding domain X993_RS01695 PF10503 Esterase PHB depolymerase X993_RS01705 PF00128 Alpha amylase, catalytic domain X993_RS01705 PF11896 Domain of unknown function (DUF3416) X993_RS01710 PF00128 Alpha amylase, catalytic domain X993_RS01710 PF16657 Maltogenic Amylase, C-terminal domain X993_RS01715 PF02806 Alpha amylase, C-terminal all-beta domain X993_RS01715 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) X993_RS01720 PF00128 Alpha amylase, catalytic domain X993_RS01720 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) X993_RS01725 PF11941 Domain of unknown function (DUF3459) X993_RS01725 PF00128 Alpha amylase, catalytic domain X993_RS01730 PF02446 4-alpha-glucanotransferase X993_RS01735 PF00128 Alpha amylase, catalytic domain X993_RS01750 PF00155 Aminotransferase class I and II X993_RS01750 PF00392 Bacterial regulatory proteins, gntR family X993_RS01755 PF04072 Leucine carboxyl methyltransferase X993_RS01785 PF00589 Phage integrase family X993_RS01795 PF02673 Bacitracin resistance protein BacA X993_RS01810 PF01551 Peptidase family M23 X993_RS01810 PF01476 LysM domain X993_RS01815 PF00501 AMP-binding enzyme X993_RS01815 PF13193 AMP-binding enzyme C-terminal domain X993_RS01825 PF01554 MatE X993_RS01885 PF02541 Ppx/GppA phosphatase family X993_RS01890 PF17941 Polyphosphate kinase C-terminal domain 1 X993_RS01890 PF02503 Polyphosphate kinase middle domain X993_RS01890 PF13089 Polyphosphate kinase N-terminal domain X993_RS01890 PF13090 Polyphosphate kinase C-terminal domain 2 X993_RS01895 PF00989 PAS fold X993_RS01895 PF11808 Phosphate regulon sensor protein PhoR X993_RS01895 PF00512 His Kinase A (phospho-acceptor) domain X993_RS01895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS01900 PF00072 Response regulator receiver domain X993_RS01900 PF00486 Transcriptional regulatory protein, C terminal X993_RS01905 PF01895 PhoU domain X993_RS01910 PF00005 ABC transporter X993_RS01915 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS01920 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS01925 PF12849 PBP superfamily domain X993_RS01930 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III X993_RS01930 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II X993_RS01930 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain X993_RS01930 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I X993_RS01935 PF00809 Pterin binding enzyme X993_RS01940 PF01434 Peptidase family M41 X993_RS01940 PF06480 FtsH Extracellular X993_RS01940 PF17862 AAA+ lid domain X993_RS01940 PF00004 ATPase family associated with various cellular activities (AAA) X993_RS01945 PF01728 FtsJ-like methyltransferase X993_RS01950 PF01985 CRS1 / YhbY (CRM) domain X993_RS01960 PF03449 Transcription elongation factor, N-terminal X993_RS01960 PF01272 Transcription elongation factor, GreA/GreB, C-term X993_RS01965 PF02142 MGS-like domain X993_RS01965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain X993_RS01965 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain X993_RS01970 PF01810 LysE type translocator X993_RS01975 PF00117 Glutamine amidotransferase class-I X993_RS01975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain X993_RS01980 PF12833 Helix-turn-helix domain X993_RS01980 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term X993_RS01995 PF01464 Transglycosylase SLT domain X993_RS01995 PF01476 LysM domain X993_RS02000 PF16123 Hydroxyacylglutathione hydrolase C-terminus X993_RS02000 PF00753 Metallo-beta-lactamase superfamily X993_RS02005 PF08241 Methyltransferase domain X993_RS02010 PF00075 RNase H X993_RS02015 PF00929 Exonuclease X993_RS02020 PF02694 Uncharacterised BCR, YnfA/UPF0060 family X993_RS02025 PF08946 Osmosensory transporter coiled coil X993_RS02025 PF00083 Sugar (and other) transporter X993_RS02050 PF13091 PLD-like domain X993_RS02055 PF00698 Acyl transferase domain X993_RS02060 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase X993_RS02065 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG X993_RS02075 PF01039 Carboxyl transferase domain X993_RS02080 PF06857 Malonate decarboxylase delta subunit (MdcD) X993_RS02085 PF16957 Malonate decarboxylase, alpha subunit, transporter X993_RS02105 PF03466 LysR substrate binding domain X993_RS02105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS02115 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain X993_RS02115 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain X993_RS02120 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain X993_RS02120 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain X993_RS02140 PF00011 Hsp20/alpha crystallin family X993_RS02155 PF00155 Aminotransferase class I and II X993_RS02155 PF00392 Bacterial regulatory proteins, gntR family X993_RS02185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS02185 PF03466 LysR substrate binding domain X993_RS02195 PF03055 Retinal pigment epithelial membrane protein X993_RS02200 PF01380 SIS domain X993_RS02205 PF01037 Lrp/AsnC ligand binding domain X993_RS02215 PF00155 Aminotransferase class I and II X993_RS02215 PF00392 Bacterial regulatory proteins, gntR family X993_RS02235 PF00072 Response regulator receiver domain X993_RS02235 PF00990 Diguanylate cyclase, GGDEF domain X993_RS02255 PF13356 Arm DNA-binding domain X993_RS02255 PF00589 Phage integrase family X993_RS02290 PF01695 IstB-like ATP binding protein X993_RS02355 PF13333 Integrase core domain X993_RS02355 PF00665 Integrase core domain X993_RS02355 PF13276 HTH-like domain X993_RS02370 PF00474 Sodium:solute symporter family X993_RS02380 PF16177 Acetyl-coenzyme A synthetase N-terminus X993_RS02380 PF13193 AMP-binding enzyme C-terminal domain X993_RS02380 PF00501 AMP-binding enzyme X993_RS02390 PF03350 Uncharacterized protein family, UPF0114 X993_RS02400 PF00210 Ferritin-like domain X993_RS02405 PF01177 Asp/Glu/Hydantoin racemase X993_RS02420 PF01618 MotA/TolQ/ExbB proton channel family X993_RS02425 PF02472 Biopolymer transport protein ExbD/TolR X993_RS02430 PF03466 LysR substrate binding domain X993_RS02430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS02435 PF02678 Pirin X993_RS02435 PF05726 Pirin C-terminal cupin domain X993_RS02445 PF10636 Hemin uptake protein hemP X993_RS02450 PF03928 Haem-degrading X993_RS02455 PF12801 4Fe-4S binding domain X993_RS02455 PF04205 FMN-binding domain X993_RS02460 PF03239 Iron permease FTR1 family X993_RS02465 PF13473 Cupredoxin-like domain X993_RS02470 PF10634 Fe2+ transport protein X993_RS02475 PF12344 Ultra-violet resistance protein B X993_RS02475 PF17757 UvrB interaction domain X993_RS02475 PF02151 UvrB/uvrC motif X993_RS02475 PF04851 Type III restriction enzyme, res subunit X993_RS02475 PF00271 Helicase conserved C-terminal domain X993_RS02480 PF00155 Aminotransferase class I and II X993_RS02490 PF00248 Aldo/keto reductase family X993_RS02495 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ X993_RS02505 PF00376 MerR family regulatory protein X993_RS02505 PF09278 MerR, DNA binding X993_RS02540 PF00072 Response regulator receiver domain X993_RS02540 PF00196 Bacterial regulatory proteins, luxR family X993_RS02555 PF18027 Cytosolic carboxypeptidase N-terminal domain X993_RS02555 PF00246 Zinc carboxypeptidase X993_RS02560 PF03883 Peroxide stress protein YaaA X993_RS02570 PF00155 Aminotransferase class I and II X993_RS02580 PF00378 Enoyl-CoA hydratase/isomerase X993_RS02585 PF00300 Histidine phosphatase superfamily (branch 1) X993_RS02595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X993_RS02595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS02595 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS02610 PF01575 MaoC like domain X993_RS02615 PF00171 Aldehyde dehydrogenase family X993_RS02615 PF01575 MaoC like domain X993_RS02620 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS02620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X993_RS02620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS02625 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X993_RS02635 PF00293 NUDIX domain X993_RS02645 PF00361 Proton-conducting membrane transporter X993_RS02650 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus X993_RS02650 PF00361 Proton-conducting membrane transporter X993_RS02655 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus X993_RS02655 PF00361 Proton-conducting membrane transporter X993_RS02660 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L X993_RS02665 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 X993_RS02670 PF12838 4Fe-4S dicluster domain X993_RS02675 PF00146 NADH dehydrogenase X993_RS02680 PF00384 Molybdopterin oxidoreductase X993_RS02680 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region X993_RS02680 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal X993_RS02685 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit X993_RS02685 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region X993_RS02685 PF10531 SLBB domain X993_RS02695 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit X993_RS02700 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit X993_RS02705 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit X993_RS02710 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 X993_RS02720 PF03840 Preprotein translocase SecG subunit X993_RS02725 PF00121 Triosephosphate isomerase X993_RS02730 PF08659 KR domain X993_RS02730 PF00698 Acyl transferase domain X993_RS02730 PF00550 Phosphopantetheine attachment site X993_RS02730 PF08240 Alcohol dehydrogenase GroES-like domain X993_RS02730 PF14765 Polyketide synthase dehydratase X993_RS02735 PF00575 S1 RNA binding domain X993_RS02735 PF03725 3' exoribonuclease family, domain 2 X993_RS02735 PF01138 3' exoribonuclease family, domain 1 X993_RS02735 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain X993_RS02735 PF00013 KH domain X993_RS02740 PF00312 Ribosomal protein S15 X993_RS02745 PF13458 Periplasmic binding protein X993_RS02760 PF00484 Carbonic anhydrase X993_RS02765 PF01740 STAS domain X993_RS02765 PF00916 Sulfate permease family X993_RS02770 PF08502 LeuA allosteric (dimerisation) domain X993_RS02770 PF00682 HMGL-like X993_RS02775 PF01066 CDP-alcohol phosphatidyltransferase X993_RS02780 PF02666 Phosphatidylserine decarboxylase X993_RS02785 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain X993_RS02785 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain X993_RS02790 PF10369 Small subunit of acetolactate synthase X993_RS02795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X993_RS02795 PF00205 Thiamine pyrophosphate enzyme, central domain X993_RS02795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X993_RS02825 PF13439 Glycosyltransferase Family 4 X993_RS02825 PF00534 Glycosyl transferases group 1 X993_RS02830 PF01219 Prokaryotic diacylglycerol kinase X993_RS02835 PF00440 Bacterial regulatory proteins, tetR family X993_RS02835 PF08360 QacR-like protein, C-terminal region X993_RS02840 PF03641 Possible lysine decarboxylase X993_RS02850 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase X993_RS02855 PF07690 Major Facilitator Superfamily X993_RS02860 PF01425 Amidase X993_RS02870 PF01411 tRNA synthetases class II (A) X993_RS02870 PF02272 DHHA1 domain X993_RS02870 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain X993_RS02890 PF00893 Small Multidrug Resistance protein X993_RS02900 PF00072 Response regulator receiver domain X993_RS02900 PF00486 Transcriptional regulatory protein, C terminal X993_RS02905 PF00512 His Kinase A (phospho-acceptor) domain X993_RS02905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS02905 PF02702 Osmosensitive K+ channel His kinase sensor domain X993_RS02905 PF13493 Domain of unknown function (DUF4118) X993_RS02905 PF13492 GAF domain X993_RS02915 PF02669 K+-transporting ATPase, c chain X993_RS02925 PF03814 Potassium-transporting ATPase A subunit X993_RS02935 PF08240 Alcohol dehydrogenase GroES-like domain X993_RS02935 PF00107 Zinc-binding dehydrogenase X993_RS02940 PF02142 MGS-like domain X993_RS02955 PF01709 Transcriptional regulator X993_RS02960 PF02844 Phosphoribosylglycinamide synthetase, N domain X993_RS02960 PF02843 Phosphoribosylglycinamide synthetase, C domain X993_RS02960 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain X993_RS02965 PF01218 Coproporphyrinogen III oxidase X993_RS02970 PF01467 Cytidylyltransferase-like X993_RS02980 PF02590 Predicted SPOUT methyltransferase X993_RS02985 PF02545 Maf-like protein X993_RS02990 PF10150 Ribonuclease E/G family X993_RS02990 PF00575 S1 RNA binding domain X993_RS02995 PF00860 Permease family X993_RS03030 PF08281 Sigma-70, region 4 X993_RS03030 PF12680 SnoaL-like domain X993_RS03030 PF04542 Sigma-70 region 2 X993_RS03035 PF02627 Carboxymuconolactone decarboxylase family X993_RS03045 PF07690 Major Facilitator Superfamily X993_RS03060 PF00535 Glycosyl transferase family 2 X993_RS03065 PF01075 Glycosyltransferase family 9 (heptosyltransferase) X993_RS03070 PF00534 Glycosyl transferases group 1 X993_RS03070 PF13439 Glycosyltransferase Family 4 X993_RS03085 PF13439 Glycosyltransferase Family 4 X993_RS03085 PF00534 Glycosyl transferases group 1 X993_RS03090 PF00005 ABC transporter X993_RS03090 PF00664 ABC transporter transmembrane region X993_RS03095 PF01336 OB-fold nucleic acid binding domain X993_RS03095 PF02811 PHP domain X993_RS03095 PF17657 Bacterial DNA polymerase III alpha subunit finger domain X993_RS03095 PF07733 Bacterial DNA polymerase III alpha NTPase domain X993_RS03095 PF14579 Helix-hairpin-helix motif X993_RS03105 PF17773 UPF0176 acylphosphatase like domain X993_RS03110 PF00749 tRNA synthetases class I (E and Q), catalytic domain X993_RS03115 PF00270 DEAD/DEAH box helicase X993_RS03115 PF00271 Helicase conserved C-terminal domain X993_RS03125 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme X993_RS03135 PF01370 NAD dependent epimerase/dehydratase family X993_RS03135 PF02222 ATP-grasp domain X993_RS03150 PF13491 4TM region of DNA translocase FtsK/SpoIIIE X993_RS03150 PF17854 FtsK alpha domain X993_RS03150 PF09397 Ftsk gamma domain X993_RS03150 PF01580 FtsK/SpoIIIE family X993_RS03155 PF10282 Lactonase, 7-bladed beta-propeller X993_RS03160 PF00723 Glycosyl hydrolases family 15 X993_RS03170 PF17938 Tetracyclin repressor-like, C-terminal domain X993_RS03170 PF00440 Bacterial regulatory proteins, tetR family X993_RS03175 PF04060 Putative Fe-S cluster X993_RS03180 PF10576 Iron-sulfur binding domain of endonuclease III X993_RS03180 PF00730 HhH-GPD superfamily base excision DNA repair protein X993_RS03180 PF00633 Helix-hairpin-helix motif X993_RS03185 PF00892 EamA-like transporter family X993_RS03195 PF00034 Cytochrome c X993_RS03200 PF00034 Cytochrome c X993_RS03205 PF00004 ATPase family associated with various cellular activities (AAA) X993_RS03205 PF02861 Clp amino terminal domain, pathogenicity island component X993_RS03205 PF17871 AAA lid domain X993_RS03205 PF10431 C-terminal, D2-small domain, of ClpB protein X993_RS03205 PF07724 AAA domain (Cdc48 subfamily) X993_RS03215 PF03594 Benzoate membrane transport protein X993_RS03220 PF00923 Transaldolase/Fructose-6-phosphate aldolase X993_RS03225 PF06983 3-demethylubiquinone-9 3-methyltransferase X993_RS03230 PF00474 Sodium:solute symporter family X993_RS03250 PF04345 Chorismate lyase X993_RS03255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS03255 PF00183 Hsp90 protein X993_RS03260 PF00155 Aminotransferase class I and II X993_RS03270 PF00892 EamA-like transporter family X993_RS03275 PF00155 Aminotransferase class I and II X993_RS03290 PF00563 EAL domain X993_RS03290 PF03707 Bacterial signalling protein N terminal repeat X993_RS03290 PF00990 Diguanylate cyclase, GGDEF domain X993_RS03305 PF00850 Histone deacetylase domain X993_RS03310 PF01546 Peptidase family M20/M25/M40 X993_RS03310 PF07687 Peptidase dimerisation domain X993_RS03315 PF00083 Sugar (and other) transporter X993_RS03315 PF07690 Major Facilitator Superfamily X993_RS03320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS03320 PF03466 LysR substrate binding domain X993_RS03330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS03330 PF03466 LysR substrate binding domain X993_RS03350 PF00521 DNA gyrase/topoisomerase IV, subunit A X993_RS03355 PF00204 DNA gyrase B X993_RS03355 PF00986 DNA gyrase B subunit, carboxyl terminus X993_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS03355 PF01751 Toprim domain X993_RS03360 PF12848 ABC transporter X993_RS03360 PF16326 ABC transporter C-terminal domain X993_RS03360 PF00005 ABC transporter X993_RS03370 PF00301 Rubredoxin X993_RS03390 PF01176 Translation initiation factor 1A / IF-1 X993_RS03425 PF00768 D-alanyl-D-alanine carboxypeptidase X993_RS03430 PF03974 Ecotin X993_RS03450 PF01161 Phosphatidylethanolamine-binding protein X993_RS03455 PF07690 Major Facilitator Superfamily X993_RS03475 PF00982 Glycosyltransferase family 20 X993_RS03495 PF13276 HTH-like domain X993_RS03495 PF13683 Integrase core domain X993_RS03510 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB X993_RS03510 PF08479 POTRA domain, ShlB-type X993_RS03510 PF17287 POTRA domain X993_RS03520 PF05860 haemagglutination activity domain X993_RS03520 PF13332 Hemagglutinin repeat X993_RS03520 PF13018 Extended Signal Peptide of Type V secretion system X993_RS03520 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain X993_RS03520 PF05594 Haemagluttinin repeat X993_RS03545 PF16861 Carbamoyltransferase C-terminus X993_RS03545 PF02543 Carbamoyltransferase N-terminus X993_RS03550 PF01565 FAD binding domain X993_RS03550 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain X993_RS03560 PF13542 Helix-turn-helix domain of transposase family ISL3 X993_RS03560 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 X993_RS03560 PF01610 Transposase X993_RS03570 PF13356 Arm DNA-binding domain X993_RS03570 PF00589 Phage integrase family X993_RS03575 PF00005 ABC transporter X993_RS03580 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS03590 PF00672 HAMP domain X993_RS03590 PF00512 His Kinase A (phospho-acceptor) domain X993_RS03590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS03595 PF00486 Transcriptional regulatory protein, C terminal X993_RS03595 PF00072 Response regulator receiver domain X993_RS03605 PF17954 Quercetinase C-terminal cupin domain X993_RS03605 PF02678 Pirin X993_RS03615 PF00497 Bacterial extracellular solute-binding proteins, family 3 X993_RS03620 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS03625 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS03630 PF00005 ABC transporter X993_RS03635 PF13609 Gram-negative porin X993_RS03640 PF00543 Nitrogen regulatory protein P-II X993_RS03645 PF00795 Carbon-nitrogen hydrolase X993_RS03645 PF02540 NAD synthase X993_RS03655 PF14310 Fibronectin type III-like domain X993_RS03655 PF00933 Glycosyl hydrolase family 3 N terminal domain X993_RS03655 PF01915 Glycosyl hydrolase family 3 C-terminal domain X993_RS03665 PF00719 Inorganic pyrophosphatase X993_RS03670 PF00171 Aldehyde dehydrogenase family X993_RS03680 PF07690 Major Facilitator Superfamily X993_RS03690 PF02602 Uroporphyrinogen-III synthase HemD X993_RS03695 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain X993_RS03695 PF03900 Porphobilinogen deaminase, C-terminal domain X993_RS03705 PF00311 Phosphoenolpyruvate carboxylase X993_RS03710 PF08241 Methyltransferase domain X993_RS03740 PF14698 Argininosuccinate lyase C-terminal X993_RS03740 PF00206 Lyase X993_RS03745 PF13419 Haloacid dehalogenase-like hydrolase X993_RS03755 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain X993_RS03755 PF01276 Orn/Lys/Arg decarboxylase, major domain X993_RS03755 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain X993_RS03760 PF00692 dUTPase X993_RS03770 PF10609 NUBPL iron-transfer P-loop NTPase X993_RS03775 PF00691 OmpA family X993_RS03775 PF05736 OprF membrane domain X993_RS03780 PF01588 Putative tRNA binding domain X993_RS03780 PF09334 tRNA synthetases class I (M) X993_RS03785 PF16864 Dimerisation domain X993_RS03785 PF00891 O-methyltransferase domain X993_RS03795 PF04357 TamB, inner membrane protein subunit of TAM complex X993_RS03800 PF17243 POTRA domain TamA domain 1 X993_RS03800 PF01103 Surface antigen X993_RS03800 PF07244 Surface antigen variable number repeat X993_RS03810 PF02616 Segregation and condensation protein ScpA X993_RS03815 PF02569 Pantoate-beta-alanine ligase X993_RS03820 PF02261 Aspartate decarboxylase X993_RS03825 PF10609 NUBPL iron-transfer P-loop NTPase X993_RS03830 PF07681 DoxX X993_RS03835 PF13333 Integrase core domain X993_RS03835 PF00665 Integrase core domain X993_RS03835 PF13276 HTH-like domain X993_RS03845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain X993_RS03845 PF07685 CobB/CobQ-like glutamine amidotransferase domain X993_RS03850 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase X993_RS03855 PF03186 CobD/Cbib protein X993_RS03855 PF17113 Regulatory signalling modulator protein AmpE X993_RS03860 PF00155 Aminotransferase class I and II X993_RS03865 PF01497 Periplasmic binding protein X993_RS03880 PF02654 Cobalamin-5-phosphate synthase X993_RS03885 PF02277 Phosphoribosyltransferase X993_RS03890 PF00005 ABC transporter X993_RS03895 PF01032 FecCD transport family X993_RS03900 PF07715 TonB-dependent Receptor Plug Domain X993_RS03900 PF00593 TonB dependent receptor X993_RS03910 PF05164 Cell division protein ZapA X993_RS03925 PF01790 Prolipoprotein diacylglyceryl transferase X993_RS03930 PF03466 LysR substrate binding domain X993_RS03930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS03935 PF00920 Dehydratase family X993_RS03940 PF00034 Cytochrome c X993_RS03950 PF04364 DNA polymerase III chi subunit, HolC X993_RS03955 PF02789 Cytosol aminopeptidase family, N-terminal domain X993_RS03955 PF00883 Cytosol aminopeptidase family, catalytic domain X993_RS03960 PF03739 Lipopolysaccharide export system permease LptF/LptG X993_RS03975 PF14824 Sirohaem biosynthesis protein central X993_RS03975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases X993_RS03975 PF10414 Sirohaem synthase dimerisation region X993_RS03980 PF00009 Elongation factor Tu GTP binding domain X993_RS03985 PF01507 Phosphoadenosine phosphosulfate reductase family X993_RS03990 PF01507 Phosphoadenosine phosphosulfate reductase family X993_RS04005 PF03466 LysR substrate binding domain X993_RS04005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS04020 PF08671 Anti-repressor SinI X993_RS04020 PF01381 Helix-turn-helix X993_RS04025 PF00596 Class II Aldolase and Adducin N-terminal domain X993_RS04030 PF00701 Dihydrodipicolinate synthetase family X993_RS04035 PF03475 3-alpha domain X993_RS04035 PF03473 MOSC domain X993_RS04040 PF00561 alpha/beta hydrolase fold X993_RS04045 PF03466 LysR substrate binding domain X993_RS04045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS04050 PF03466 LysR substrate binding domain X993_RS04050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS04060 PF01479 S4 domain X993_RS04060 PF00849 RNA pseudouridylate synthase X993_RS04075 PF00175 Oxidoreductase NAD-binding domain X993_RS04075 PF00970 Oxidoreductase FAD-binding domain X993_RS04075 PF00111 2Fe-2S iron-sulfur cluster binding domain X993_RS04080 PF00202 Aminotransferase class-III X993_RS04085 PF00583 Acetyltransferase (GNAT) family X993_RS04095 PF00005 ABC transporter X993_RS04100 PF00005 ABC transporter X993_RS04100 PF12399 Branched-chain amino acid ATP-binding cassette transporter X993_RS04105 PF02653 Branched-chain amino acid transport system / permease component X993_RS04105 PF11862 Domain of unknown function (DUF3382) X993_RS04110 PF02653 Branched-chain amino acid transport system / permease component X993_RS04120 PF02401 LytB protein X993_RS04125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase X993_RS04130 PF04002 RadC-like JAB domain X993_RS04135 PF00830 Ribosomal L28 family X993_RS04140 PF00471 Ribosomal protein L33 X993_RS04145 PF00890 FAD binding domain X993_RS04145 PF02910 Fumarate reductase flavoprotein C-term X993_RS04150 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain X993_RS04150 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain X993_RS04155 PF02445 Quinolinate synthetase A protein X993_RS04165 PF12795 Mechanosensitive ion channel porin domain X993_RS04165 PF00924 Mechanosensitive ion channel X993_RS04165 PF12794 Mechanosensitive ion channel inner membrane domain 1 X993_RS04170 PF01189 16S rRNA methyltransferase RsmB/F X993_RS04170 PF01029 NusB family X993_RS04175 PF00551 Formyl transferase X993_RS04180 PF06574 FAD synthetase X993_RS04180 PF01687 Riboflavin kinase X993_RS04185 PF06827 Zinc finger found in FPG and IleRS X993_RS04185 PF08264 Anticodon-binding domain of tRNA X993_RS04185 PF00133 tRNA synthetases class I (I, L, M and V) X993_RS04190 PF01252 Signal peptidase (SPase) II X993_RS04195 PF04127 DNA / pantothenate metabolism flavoprotein X993_RS04195 PF02441 Flavoprotein X993_RS04200 PF00692 dUTPase X993_RS04215 PF00324 Amino acid permease X993_RS04220 PF10431 C-terminal, D2-small domain, of ClpB protein X993_RS04220 PF00004 ATPase family associated with various cellular activities (AAA) X993_RS04220 PF07724 AAA domain (Cdc48 subfamily) X993_RS04220 PF02861 Clp amino terminal domain, pathogenicity island component X993_RS04220 PF17871 AAA lid domain X993_RS04225 PF02617 ATP-dependent Clp protease adaptor protein ClpS X993_RS04230 PF00313 'Cold-shock' DNA-binding domain X993_RS04235 PF07732 Multicopper oxidase X993_RS04235 PF07731 Multicopper oxidase X993_RS04240 PF00180 Isocitrate/isopropylmalate dehydrogenase X993_RS04245 PF00849 RNA pseudouridylate synthase X993_RS04255 PF03144 Elongation factor Tu domain 2 X993_RS04255 PF00679 Elongation factor G C-terminus X993_RS04255 PF00009 Elongation factor Tu GTP binding domain X993_RS04255 PF14492 Elongation Factor G, domain II X993_RS04255 PF03764 Elongation factor G, domain IV X993_RS04270 PF00248 Aldo/keto reductase family X993_RS04275 PF00392 Bacterial regulatory proteins, gntR family X993_RS04275 PF07702 UTRA domain X993_RS04285 PF00285 Citrate synthase, C-terminal domain X993_RS04295 PF07690 Major Facilitator Superfamily X993_RS04340 PF02777 Iron/manganese superoxide dismutases, C-terminal domain X993_RS04340 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain X993_RS04345 PF02601 Exonuclease VII, large subunit X993_RS04345 PF13742 OB-fold nucleic acid binding domain X993_RS04350 PF02606 Tetraacyldisaccharide-1-P 4'-kinase X993_RS04355 PF03966 Trm112p-like protein X993_RS04360 PF02348 Cytidylyltransferase X993_RS04365 PF05191 Adenylate kinase, active site lid X993_RS04370 PF00106 short chain dehydrogenase X993_RS04375 PF13369 Transglutaminase-like superfamily X993_RS04380 PF03023 Lipid II flippase MurJ X993_RS04385 PF01649 Ribosomal protein S20 X993_RS04395 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain X993_RS04395 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain X993_RS04400 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain X993_RS04400 PF01565 FAD binding domain X993_RS04405 PF04461 Protein of unknown function (DUF520) X993_RS04410 PF02660 Glycerol-3-phosphate acyltransferase X993_RS04415 PF04073 Aminoacyl-tRNA editing domain X993_RS04420 PF13193 AMP-binding enzyme C-terminal domain X993_RS04420 PF00501 AMP-binding enzyme X993_RS04425 PF00589 Phage integrase family X993_RS04425 PF02899 Phage integrase, N-terminal SAM-like domain X993_RS04435 PF08331 Domain of unknown function (DUF1730) X993_RS04440 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE X993_RS04445 PF11741 AMIN domain X993_RS04445 PF01520 N-acetylmuramoyl-L-alanine amidase X993_RS04450 PF00892 EamA-like transporter family X993_RS04455 PF05726 Pirin C-terminal cupin domain X993_RS04455 PF02678 Pirin X993_RS04460 PF00085 Thioredoxin X993_RS04470 PF00899 ThiF family X993_RS04475 PF01243 Pyridoxamine 5'-phosphate oxidase X993_RS04475 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region X993_RS04495 PF01625 Peptide methionine sulfoxide reductase X993_RS04505 PF01613 Flavin reductase like domain X993_RS04510 PF01037 Lrp/AsnC ligand binding domain X993_RS04515 PF04199 Putative cyclase X993_RS04520 PF00266 Aminotransferase class-V X993_RS04525 PF03301 Tryptophan 2,3-dioxygenase X993_RS04530 PF07690 Major Facilitator Superfamily X993_RS04540 PF02558 Ketopantoate reductase PanE/ApbA X993_RS04540 PF08546 Ketopantoate reductase PanE/ApbA C terminal X993_RS04545 PF00171 Aldehyde dehydrogenase family X993_RS04550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X993_RS04550 PF00205 Thiamine pyrophosphate enzyme, central domain X993_RS04550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X993_RS04555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS04555 PF03466 LysR substrate binding domain X993_RS04560 PF08125 Mannitol dehydrogenase C-terminal domain X993_RS04560 PF01232 Mannitol dehydrogenase Rossmann domain X993_RS04565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain X993_RS04565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain X993_RS04570 PF04198 Putative sugar-binding domain X993_RS04575 PF07690 Major Facilitator Superfamily X993_RS04580 PF00144 Beta-lactamase X993_RS04585 PF03466 LysR substrate binding domain X993_RS04585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS04595 PF08402 TOBE domain X993_RS04595 PF00005 ABC transporter X993_RS04600 PF13419 Haloacid dehalogenase-like hydrolase X993_RS04605 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS04610 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS04620 PF08013 Tagatose 6 phosphate kinase X993_RS04625 PF00294 pfkB family carbohydrate kinase X993_RS04635 PF01475 Ferric uptake regulator family X993_RS04645 PF00005 ABC transporter X993_RS04650 PF00950 ABC 3 transport family X993_RS04655 PF00756 Putative esterase X993_RS04660 PF08240 Alcohol dehydrogenase GroES-like domain X993_RS04660 PF00107 Zinc-binding dehydrogenase X993_RS04665 PF12833 Helix-turn-helix domain X993_RS04665 PF01965 DJ-1/PfpI family X993_RS04670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain X993_RS04670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain X993_RS04675 PF00860 Permease family X993_RS04680 PF02321 Outer membrane efflux protein X993_RS04685 PF00873 AcrB/AcrD/AcrF family X993_RS04690 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion X993_RS04690 PF00529 HlyD membrane-fusion protein of T1SS X993_RS04695 PF08361 MAATS-type transcriptional repressor, C-terminal region X993_RS04695 PF00440 Bacterial regulatory proteins, tetR family X993_RS04715 PF13180 PDZ domain X993_RS04725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS04725 PF00512 His Kinase A (phospho-acceptor) domain X993_RS04730 PF00072 Response regulator receiver domain X993_RS04730 PF00486 Transcriptional regulatory protein, C terminal X993_RS04735 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family X993_RS04740 PF04116 Fatty acid hydroxylase superfamily X993_RS04750 PF03481 Putative GTP-binding controlling metal-binding X993_RS04750 PF01300 Telomere recombination X993_RS04755 PF02222 ATP-grasp domain X993_RS04755 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain X993_RS04760 PF00731 AIR carboxylase X993_RS04765 PF01259 SAICAR synthetase X993_RS04770 PF01116 Fructose-bisphosphate aldolase class-II X993_RS04775 PF00224 Pyruvate kinase, barrel domain X993_RS04775 PF02887 Pyruvate kinase, alpha/beta domain X993_RS04780 PF00162 Phosphoglycerate kinase X993_RS04795 PF01063 Amino-transferase class IV X993_RS04805 PF01075 Glycosyltransferase family 9 (heptosyltransferase) X993_RS04815 PF00561 alpha/beta hydrolase fold X993_RS04825 PF13181 Tetratricopeptide repeat X993_RS04825 PF01435 Peptidase family M48 X993_RS04830 PF01967 MoaC family X993_RS04845 PF11846 Virulence factor membrane-bound polymerase, C-terminal X993_RS04845 PF15864 Protein glycosylation ligase X993_RS04845 PF04932 O-Antigen ligase X993_RS04850 PF07963 Prokaryotic N-terminal methylation motif X993_RS04850 PF00114 Pilin (bacterial filament) X993_RS04855 PF03741 Integral membrane protein TerC family X993_RS04860 PF02629 CoA binding domain X993_RS04860 PF00549 CoA-ligase X993_RS04865 PF00549 CoA-ligase X993_RS04865 PF08442 ATP-grasp domain X993_RS04875 PF02631 RecX family X993_RS04880 PF00154 recA bacterial DNA recombination protein X993_RS04885 PF00486 Transcriptional regulatory protein, C terminal X993_RS04885 PF00072 Response regulator receiver domain X993_RS04895 PF00083 Sugar (and other) transporter X993_RS04895 PF08946 Osmosensory transporter coiled coil X993_RS04945 PF00512 His Kinase A (phospho-acceptor) domain X993_RS04945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS04945 PF09308 LuxQ, periplasmic X993_RS04945 PF00072 Response regulator receiver domain X993_RS04950 PF03466 LysR substrate binding domain X993_RS04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS04955 PF01804 Penicillin amidase X993_RS04970 PF00732 GMC oxidoreductase X993_RS04970 PF05199 GMC oxidoreductase X993_RS04985 PF13378 Enolase C-terminal domain-like X993_RS04985 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain X993_RS04990 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X993_RS04990 PF00205 Thiamine pyrophosphate enzyme, central domain X993_RS04990 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X993_RS04995 PF00116 Cytochrome C oxidase subunit II, periplasmic domain X993_RS05000 PF00115 Cytochrome C and Quinol oxidase polypeptide I X993_RS05010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III X993_RS05010 PF00034 Cytochrome c X993_RS05025 PF00156 Phosphoribosyl transferase domain X993_RS05025 PF05139 Erythromycin esterase X993_RS05030 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family X993_RS05030 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain X993_RS05035 PF00156 Phosphoribosyl transferase domain X993_RS05035 PF01738 Dienelactone hydrolase family X993_RS05040 PF05139 Erythromycin esterase X993_RS05040 PF00156 Phosphoribosyl transferase domain X993_RS05060 PF00005 ABC transporter X993_RS05075 PF00581 Rhodanese-like domain X993_RS05080 PF03466 LysR substrate binding domain X993_RS05080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS05100 PF08447 PAS fold X993_RS05100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS05115 PF00158 Sigma-54 interaction domain X993_RS05115 PF02954 Bacterial regulatory protein, Fis family X993_RS05115 PF00072 Response regulator receiver domain X993_RS05120 PF00563 EAL domain X993_RS05120 PF00990 Diguanylate cyclase, GGDEF domain X993_RS05120 PF03707 Bacterial signalling protein N terminal repeat X993_RS05125 PF16656 Purple acid Phosphatase, N-terminal domain X993_RS05125 PF00149 Calcineurin-like phosphoesterase X993_RS05140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain X993_RS05140 PF13378 Enolase C-terminal domain-like X993_RS05155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III X993_RS05155 PF00034 Cytochrome c X993_RS05160 PF00270 DEAD/DEAH box helicase X993_RS05160 PF00271 Helicase conserved C-terminal domain X993_RS05180 PF00455 DeoR C terminal sensor domain X993_RS05180 PF08220 DeoR-like helix-turn-helix domain X993_RS05195 PF01266 FAD dependent oxidoreductase X993_RS05195 PF16901 C-terminal domain of alpha-glycerophosphate oxidase X993_RS05200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain X993_RS05200 PF00370 FGGY family of carbohydrate kinases, N-terminal domain X993_RS05205 PF00230 Major intrinsic protein X993_RS05215 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) X993_RS05220 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) X993_RS05225 PF00733 Asparagine synthase X993_RS05225 PF13537 Glutamine amidotransferase domain X993_RS05230 PF00206 Lyase X993_RS05230 PF02655 ATP-grasp domain X993_RS05240 PF13419 Haloacid dehalogenase-like hydrolase X993_RS05245 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase X993_RS05250 PF01381 Helix-turn-helix X993_RS05250 PF07883 Cupin domain X993_RS05255 PF07690 Major Facilitator Superfamily X993_RS05260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS05260 PF03466 LysR substrate binding domain X993_RS05265 PF01938 TRAM domain X993_RS05265 PF04055 Radical SAM superfamily X993_RS05265 PF00919 Uncharacterized protein family UPF0004 X993_RS05270 PF02562 PhoH-like protein X993_RS05275 PF02130 Uncharacterized protein family UPF0054 X993_RS05280 PF04752 ChaC-like protein X993_RS05285 PF03471 Transporter associated domain X993_RS05285 PF00571 CBS domain X993_RS05290 PF00795 Carbon-nitrogen hydrolase X993_RS05295 PF02091 Glycyl-tRNA synthetase alpha subunit X993_RS05300 PF05746 DALR anticodon binding domain X993_RS05300 PF02092 Glycyl-tRNA synthetase beta subunit X993_RS05310 PF01553 Acyltransferase X993_RS05320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily X993_RS05330 PF00398 Ribosomal RNA adenine dimethylase X993_RS05335 PF04166 Pyridoxal phosphate biosynthetic protein PdxA X993_RS05340 PF09312 SurA N-terminal domain X993_RS05340 PF00639 PPIC-type PPIASE domain X993_RS05345 PF04453 LPS transport system D X993_RS05350 PF01636 Phosphotransferase enzyme family X993_RS05355 PF00483 Nucleotidyl transferase X993_RS05365 PF00664 ABC transporter transmembrane region X993_RS05365 PF00005 ABC transporter X993_RS05370 PF03061 Thioesterase superfamily X993_RS05380 PF02634 FdhD/NarQ family X993_RS05385 PF00378 Enoyl-CoA hydratase/isomerase X993_RS05390 PF00108 Thiolase, N-terminal domain X993_RS05390 PF02803 Thiolase, C-terminal domain X993_RS05395 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain X993_RS05395 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain X993_RS05395 PF00378 Enoyl-CoA hydratase/isomerase X993_RS05400 PF12806 Acetyl-CoA dehydrogenase C-terminal like X993_RS05400 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS05400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS05400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X993_RS05410 PF13091 PLD-like domain X993_RS05415 PF00293 NUDIX domain X993_RS05420 PF02938 GAD domain X993_RS05420 PF01336 OB-fold nucleic acid binding domain X993_RS05420 PF00152 tRNA synthetases class II (D, K and N) X993_RS05440 PF03109 ABC1 family X993_RS05455 PF01209 ubiE/COQ5 methyltransferase family X993_RS05480 PF00291 Pyridoxal-phosphate dependent enzyme X993_RS05480 PF00585 C-terminal regulatory domain of Threonine dehydratase X993_RS05485 PF14489 QueF-like protein X993_RS05485 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term X993_RS05490 PF01042 Endoribonuclease L-PSP X993_RS05495 PF07969 Amidohydrolase family X993_RS05500 PF01380 SIS domain X993_RS05500 PF01418 Helix-turn-helix domain, rpiR family X993_RS05520 PF07690 Major Facilitator Superfamily X993_RS05530 PF07859 alpha/beta hydrolase fold X993_RS05550 PF13439 Glycosyltransferase Family 4 X993_RS05550 PF00534 Glycosyl transferases group 1 X993_RS05555 PF02563 Polysaccharide biosynthesis/export protein X993_RS05555 PF10531 SLBB domain X993_RS05555 PF18412 Outer-membrane lipoprotein Wza C-terminal domain X993_RS05560 PF02397 Bacterial sugar transferase X993_RS05575 PF00550 Phosphopantetheine attachment site X993_RS05605 PF00158 Sigma-54 interaction domain X993_RS05605 PF02954 Bacterial regulatory protein, Fis family X993_RS05605 PF00072 Response regulator receiver domain X993_RS05615 PF13439 Glycosyltransferase Family 4 X993_RS05615 PF00534 Glycosyl transferases group 1 X993_RS05625 PF00483 Nucleotidyl transferase X993_RS05625 PF01050 Mannose-6-phosphate isomerase X993_RS05640 PF08448 PAS fold X993_RS05640 PF00990 Diguanylate cyclase, GGDEF domain X993_RS05640 PF00563 EAL domain X993_RS05645 PF00596 Class II Aldolase and Adducin N-terminal domain X993_RS05665 PF00069 Protein kinase domain X993_RS05705 PF02627 Carboxymuconolactone decarboxylase family X993_RS05730 PF00436 Single-strand binding protein family X993_RS05735 PF07690 Major Facilitator Superfamily X993_RS05740 PF17760 UvrA interaction domain X993_RS05740 PF17755 UvrA DNA-binding domain X993_RS05750 PF00551 Formyl transferase X993_RS05760 PF01810 LysE type translocator X993_RS05765 PF00156 Phosphoribosyl transferase domain X993_RS05770 PF02080 TrkA-C domain X993_RS05770 PF02254 TrkA-N domain X993_RS05770 PF00999 Sodium/hydrogen exchanger family X993_RS05775 PF01380 SIS domain X993_RS05775 PF00571 CBS domain X993_RS05795 PF12399 Branched-chain amino acid ATP-binding cassette transporter X993_RS05795 PF00005 ABC transporter X993_RS05800 PF00309 Sigma-54 factor, Activator interacting domain (AID) X993_RS05800 PF04552 Sigma-54, DNA binding domain X993_RS05800 PF04963 Sigma-54 factor, core binding domain X993_RS05805 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein X993_RS05810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 X993_RS05815 PF02603 HPr Serine kinase N terminus X993_RS05815 PF07475 HPr Serine kinase C-terminal domain X993_RS05820 PF03668 P-loop ATPase protein family X993_RS05830 PF14815 NUDIX domain X993_RS05830 PF10576 Iron-sulfur binding domain of endonuclease III X993_RS05830 PF00633 Helix-hairpin-helix motif X993_RS05830 PF00730 HhH-GPD superfamily base excision DNA repair protein X993_RS05835 PF06827 Zinc finger found in FPG and IleRS X993_RS05835 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain X993_RS05835 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain X993_RS05845 PF03550 Outer membrane lipoprotein LolB X993_RS05850 PF00288 GHMP kinases N terminal domain X993_RS05850 PF08544 GHMP kinases C terminal X993_RS05860 PF14572 Phosphoribosyl synthetase-associated domain X993_RS05860 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase X993_RS05865 PF14693 Ribosomal protein TL5, C-terminal domain X993_RS05865 PF01386 Ribosomal L25p family X993_RS05870 PF01195 Peptidyl-tRNA hydrolase X993_RS05875 PF00155 Aminotransferase class I and II X993_RS05880 PF00037 4Fe-4S binding domain X993_RS05885 PF01467 Cytidylyltransferase-like X993_RS05895 PF00448 SRP54-type protein, GTPase domain X993_RS05895 PF02881 SRP54-type protein, helical bundle domain X993_RS05900 PF14497 Glutathione S-transferase, C-terminal domain X993_RS05900 PF02798 Glutathione S-transferase, N-terminal domain X993_RS05910 PF04324 BFD-like [2Fe-2S] binding domain X993_RS05910 PF01077 Nitrite and sulphite reductase 4Fe-4S domain X993_RS05910 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain X993_RS05910 PF07992 Pyridine nucleotide-disulphide oxidoreductase X993_RS05910 PF18267 Rubredoxin NAD+ reductase C-terminal domain X993_RS05915 PF00355 Rieske [2Fe-2S] domain X993_RS05920 PF01568 Molydopterin dinucleotide binding domain X993_RS05920 PF00384 Molybdopterin oxidoreductase X993_RS05920 PF04879 Molybdopterin oxidoreductase Fe4S4 domain X993_RS05925 PF02885 Glycosyl transferase family, helical bundle domain X993_RS05935 PF08502 LeuA allosteric (dimerisation) domain X993_RS05935 PF00682 HMGL-like X993_RS05945 PF09411 Lipid A 3-O-deacylase (PagL) X993_RS05950 PF04545 Sigma-70, region 4 X993_RS05950 PF04542 Sigma-70 region 2 X993_RS05950 PF00140 Sigma-70 factor, region 1.2 X993_RS05955 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 X993_RS05955 PF13542 Helix-turn-helix domain of transposase family ISL3 X993_RS05955 PF01610 Transposase X993_RS05965 PF01654 Cytochrome bd terminal oxidase subunit I X993_RS05970 PF02322 Cytochrome bd terminal oxidase subunit II X993_RS05975 PF08173 Membrane bound YbgT-like protein X993_RS05990 PF03173 Putative carbohydrate binding domain X993_RS05990 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain X993_RS05990 PF00728 Glycosyl hydrolase family 20, catalytic domain X993_RS05990 PF02838 Glycosyl hydrolase family 20, domain 2 X993_RS05995 PF02378 Phosphotransferase system, EIIC X993_RS05995 PF00367 phosphotransferase system, EIIB X993_RS05995 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 X993_RS06000 PF05524 PEP-utilising enzyme, N-terminal X993_RS06000 PF02896 PEP-utilising enzyme, TIM barrel domain X993_RS06000 PF00381 PTS HPr component phosphorylation site X993_RS06000 PF00391 PEP-utilising enzyme, mobile domain X993_RS06000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 X993_RS06005 PF01380 SIS domain X993_RS06010 PF01979 Amidohydrolase family X993_RS06015 PF00392 Bacterial regulatory proteins, gntR family X993_RS06015 PF07702 UTRA domain X993_RS06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS06020 PF03466 LysR substrate binding domain X993_RS06025 PF00501 AMP-binding enzyme X993_RS06065 PF13193 AMP-binding enzyme C-terminal domain X993_RS06065 PF00501 AMP-binding enzyme X993_RS06075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS06075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X993_RS06075 PF12806 Acetyl-CoA dehydrogenase C-terminal like X993_RS06075 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS06085 PF13649 Methyltransferase domain X993_RS06095 PF00005 ABC transporter X993_RS06095 PF12857 TOBE-like domain X993_RS06110 PF00202 Aminotransferase class-III X993_RS06120 PF07690 Major Facilitator Superfamily X993_RS06130 PF14579 Helix-hairpin-helix motif X993_RS06130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain X993_RS06130 PF07733 Bacterial DNA polymerase III alpha NTPase domain X993_RS06130 PF02811 PHP domain X993_RS06140 PF03846 Cell division inhibitor SulA X993_RS06145 PF00005 ABC transporter X993_RS06160 PF03180 NLPA lipoprotein X993_RS06165 PF00672 HAMP domain X993_RS06165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS06165 PF02203 Tar ligand binding domain homologue X993_RS06175 PF02630 SCO1/SenC X993_RS06180 PF01040 UbiA prenyltransferase family X993_RS06185 PF02628 Cytochrome oxidase assembly protein X993_RS06205 PF00510 Cytochrome c oxidase subunit III X993_RS06215 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 X993_RS06225 PF00115 Cytochrome C and Quinol oxidase polypeptide I X993_RS06230 PF02790 Cytochrome C oxidase subunit II, transmembrane domain X993_RS06230 PF00116 Cytochrome C oxidase subunit II, periplasmic domain X993_RS06240 PF08241 Methyltransferase domain X993_RS06245 PF00156 Phosphoribosyl transferase domain X993_RS06250 PF00588 SpoU rRNA Methylase family X993_RS06255 PF01661 Macro domain X993_RS06260 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus X993_RS06260 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus X993_RS06265 PF02556 Preprotein translocase subunit SecB X993_RS06270 PF00462 Glutaredoxin X993_RS06275 PF00581 Rhodanese-like domain X993_RS06280 PF00300 Histidine phosphatase superfamily (branch 1) X993_RS06285 PF03572 Peptidase family S41 X993_RS06285 PF13180 PDZ domain X993_RS06290 PF00899 ThiF family X993_RS06295 PF05524 PEP-utilising enzyme, N-terminal X993_RS06295 PF02896 PEP-utilising enzyme, TIM barrel domain X993_RS06295 PF00391 PEP-utilising enzyme, mobile domain X993_RS06300 PF00381 PTS HPr component phosphorylation site X993_RS06310 PF02951 Prokaryotic glutathione synthetase, N-terminal domain X993_RS06310 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain X993_RS06320 PF00909 Ammonium Transporter Family X993_RS06325 PF00543 Nitrogen regulatory protein P-II X993_RS06330 PF04380 Membrane fusogenic activity X993_RS06335 PF01078 Magnesium chelatase, subunit ChlI X993_RS06335 PF13335 Magnesium chelatase, subunit ChlI C-terminal X993_RS06350 PF13193 AMP-binding enzyme C-terminal domain X993_RS06350 PF00501 AMP-binding enzyme X993_RS06350 PF00975 Thioesterase domain X993_RS06350 PF00668 Condensation domain X993_RS06350 PF00550 Phosphopantetheine attachment site X993_RS06360 PF00578 AhpC/TSA family X993_RS06365 PF02954 Bacterial regulatory protein, Fis family X993_RS06365 PF00158 Sigma-54 interaction domain X993_RS06365 PF00072 Response regulator receiver domain X993_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS06370 PF02743 Cache domain X993_RS06370 PF00512 His Kinase A (phospho-acceptor) domain X993_RS06375 PF00375 Sodium:dicarboxylate symporter family X993_RS06380 PF00474 Sodium:solute symporter family X993_RS06390 PF02515 CoA-transferase family III X993_RS06395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X993_RS06395 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS06395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS06400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X993_RS06400 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS06400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS06405 PF00378 Enoyl-CoA hydratase/isomerase X993_RS06405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain X993_RS06405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain X993_RS06410 PF03466 LysR substrate binding domain X993_RS06410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS06440 PF04055 Radical SAM superfamily X993_RS06440 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family X993_RS06445 PF03099 Biotin/lipoate A/B protein ligase family X993_RS06455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS06455 PF03466 LysR substrate binding domain X993_RS06460 PF04359 Protein of unknown function (DUF493) X993_RS06465 PF01063 Amino-transferase class IV X993_RS06470 PF00768 D-alanyl-D-alanine carboxypeptidase X993_RS06470 PF07943 Penicillin-binding protein 5, C-terminal domain X993_RS06505 PF00005 ABC transporter X993_RS06510 PF02405 Permease MlaE X993_RS06515 PF02872 5'-nucleotidase, C-terminal domain X993_RS06515 PF00149 Calcineurin-like phosphoesterase X993_RS06530 PF03309 Type III pantothenate kinase X993_RS06540 PF01467 Cytidylyltransferase-like X993_RS06560 PF00378 Enoyl-CoA hydratase/isomerase X993_RS06580 PF12091 Protein of unknown function (DUF3567) X993_RS06585 PF00809 Pterin binding enzyme X993_RS06585 PF02310 B12 binding domain X993_RS06585 PF02607 B12 binding domain X993_RS06585 PF02965 Vitamin B12 dependent methionine synthase, activation domain X993_RS06585 PF02574 Homocysteine S-methyltransferase X993_RS06590 PF02574 Homocysteine S-methyltransferase X993_RS06590 PF02310 B12 binding domain X993_RS06590 PF02607 B12 binding domain X993_RS06590 PF02965 Vitamin B12 dependent methionine synthase, activation domain X993_RS06590 PF00809 Pterin binding enzyme X993_RS06600 PF03485 Arginyl tRNA synthetase N terminal domain X993_RS06600 PF00750 tRNA synthetases class I (R) X993_RS06600 PF05746 DALR anticodon binding domain X993_RS06610 PF13462 Thioredoxin X993_RS06615 PF00106 short chain dehydrogenase X993_RS06635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X993_RS06640 PF00005 ABC transporter X993_RS06640 PF16326 ABC transporter C-terminal domain X993_RS06640 PF12848 ABC transporter X993_RS06650 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) X993_RS06655 PF00484 Carbonic anhydrase X993_RS06660 PF02803 Thiolase, C-terminal domain X993_RS06660 PF00108 Thiolase, N-terminal domain X993_RS06680 PF00202 Aminotransferase class-III X993_RS06685 PF00155 Aminotransferase class I and II X993_RS06695 PF06968 Biotin and Thiamin Synthesis associated domain X993_RS06695 PF04055 Radical SAM superfamily X993_RS06700 PF03932 CutC family X993_RS06710 PF00245 Alkaline phosphatase X993_RS06715 PF00245 Alkaline phosphatase X993_RS06725 PF00563 EAL domain X993_RS06725 PF05231 MASE1 X993_RS06730 PF00999 Sodium/hydrogen exchanger family X993_RS06745 PF07885 Ion channel X993_RS06745 PF17655 Inward rectifier potassium channel C-terminal domain X993_RS06770 PF00158 Sigma-54 interaction domain X993_RS06770 PF02954 Bacterial regulatory protein, Fis family X993_RS06770 PF00072 Response regulator receiver domain X993_RS06790 PF13340 Putative transposase of IS4/5 family (DUF4096) X993_RS06800 PF00701 Dihydrodipicolinate synthetase family X993_RS06815 PF02630 SCO1/SenC X993_RS06840 PF01037 Lrp/AsnC ligand binding domain X993_RS06850 PF05506 Domain of unknown function (DUF756) X993_RS06850 PF04185 Phosphoesterase family X993_RS06870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain X993_RS06875 PF00682 HMGL-like X993_RS06895 PF01037 Lrp/AsnC ligand binding domain X993_RS06895 PF13404 AsnC-type helix-turn-helix domain X993_RS06900 PF00561 alpha/beta hydrolase fold X993_RS06910 PF03466 LysR substrate binding domain X993_RS06910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS06915 PF13609 Gram-negative porin X993_RS06925 PF13593 SBF-like CPA transporter family (DUF4137) X993_RS06930 PF13333 Integrase core domain X993_RS06930 PF00665 Integrase core domain X993_RS06930 PF13276 HTH-like domain X993_RS06940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS06940 PF00672 HAMP domain X993_RS06940 PF02203 Tar ligand binding domain homologue X993_RS06945 PF00356 Bacterial regulatory proteins, lacI family X993_RS06955 PF00294 pfkB family carbohydrate kinase X993_RS06985 PF01171 PP-loop family X993_RS06990 PF00132 Bacterial transferase hexapeptide (six repeats) X993_RS06990 PF12804 MobA-like NTP transferase domain X993_RS06995 PF01380 SIS domain X993_RS07015 PF00873 AcrB/AcrD/AcrF family X993_RS07020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion X993_RS07020 PF00529 HlyD membrane-fusion protein of T1SS X993_RS07040 PF04536 TPM domain X993_RS07045 PF04011 LemA family X993_RS07050 PF04945 YHS domain X993_RS07070 PF00764 Arginosuccinate synthase X993_RS07075 PF07992 Pyridine nucleotide-disulphide oxidoreductase X993_RS07075 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain X993_RS07125 PF13609 Gram-negative porin X993_RS07135 PF03831 PhnA domain X993_RS07135 PF08274 PhnA Zinc-Ribbon X993_RS07155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS07155 PF03466 LysR substrate binding domain X993_RS07160 PF00860 Permease family X993_RS07165 PF00669 Bacterial flagellin N-terminal helical region X993_RS07170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal X993_RS07170 PF00460 Flagella basal body rod protein X993_RS07175 PF07238 PilZ domain X993_RS07175 PF07317 Flagellar regulator YcgR X993_RS07180 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase X993_RS07180 PF10135 Rod binding protein X993_RS07185 PF02119 Flagellar P-ring protein X993_RS07190 PF02107 Flagellar L-ring protein X993_RS07195 PF00460 Flagella basal body rod protein X993_RS07195 PF06429 Flagellar basal body rod FlgEFG protein C-terminal X993_RS07200 PF00460 Flagella basal body rod protein X993_RS07200 PF06429 Flagellar basal body rod FlgEFG protein C-terminal X993_RS07205 PF07559 Flagellar basal body protein FlaE X993_RS07205 PF00460 Flagella basal body rod protein X993_RS07205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal X993_RS07210 PF03963 Flagellar hook capping protein - N-terminal region X993_RS07210 PF13860 FlgD Ig-like domain X993_RS07210 PF13861 FlgD Tudor-like domain X993_RS07215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal X993_RS07215 PF00460 Flagella basal body rod protein X993_RS07220 PF00460 Flagella basal body rod protein X993_RS07225 PF13144 Chaperone for flagella basal body P-ring formation X993_RS07225 PF17656 FlgA N-terminal domain X993_RS07230 PF04316 Anti-sigma-28 factor, FlgM X993_RS07300 PF12833 Helix-turn-helix domain X993_RS07305 PF00486 Transcriptional regulatory protein, C terminal X993_RS07305 PF00072 Response regulator receiver domain X993_RS07310 PF17149 Periplasmic sensor domain found in signal transduction proteins X993_RS07310 PF00672 HAMP domain X993_RS07310 PF00512 His Kinase A (phospho-acceptor) domain X993_RS07310 PF01627 Hpt domain X993_RS07310 PF00072 Response regulator receiver domain X993_RS07310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS07315 PF12627 Probable RNA and SrmB- binding site of polymerase A X993_RS07315 PF01743 Poly A polymerase head domain X993_RS07315 PF01966 HD domain X993_RS07330 PF14718 Soluble lytic murein transglycosylase L domain X993_RS07330 PF01464 Transglycosylase SLT domain X993_RS07335 PF01812 5-formyltetrahydrofolate cyclo-ligase family X993_RS07350 PF02682 Carboxyltransferase domain, subdomain C and D X993_RS07355 PF02626 Carboxyltransferase domain, subdomain A and B X993_RS07360 PF03746 LamB/YcsF family X993_RS07385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X993_RS07385 PF00005 ABC transporter X993_RS07390 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X993_RS07390 PF00005 ABC transporter X993_RS07395 PF12911 N-terminal TM domain of oligopeptide transport permease C X993_RS07395 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS07400 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS07405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X993_RS07410 PF07690 Major Facilitator Superfamily X993_RS07415 PF01355 High potential iron-sulfur protein X993_RS07420 PF01266 FAD dependent oxidoreductase X993_RS07425 PF05362 Lon protease (S16) C-terminal proteolytic domain X993_RS07425 PF00004 ATPase family associated with various cellular activities (AAA) X993_RS07440 PF03372 Endonuclease/Exonuclease/phosphatase family X993_RS07445 PF01810 LysE type translocator X993_RS07450 PF00175 Oxidoreductase NAD-binding domain X993_RS07450 PF00970 Oxidoreductase FAD-binding domain X993_RS07460 PF00196 Bacterial regulatory proteins, luxR family X993_RS07460 PF00072 Response regulator receiver domain X993_RS07465 PF13520 Amino acid permease X993_RS07480 PF01312 FlhB HrpN YscU SpaS Family X993_RS07495 PF02561 Flagellar protein FliS X993_RS07500 PF02049 Flagellar hook-basal body complex protein FliE X993_RS07505 PF08345 Flagellar M-ring protein C-terminal X993_RS07505 PF01514 Secretory protein of YscJ/FliF family X993_RS07510 PF14841 FliG middle domain X993_RS07510 PF01706 FliG C-terminal domain X993_RS07510 PF14842 FliG N-terminal domain X993_RS07520 PF18269 T3SS EscN ATPase C-terminal domain X993_RS07520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain X993_RS07535 PF00732 GMC oxidoreductase X993_RS07535 PF05199 GMC oxidoreductase X993_RS07540 PF18158 Adaptive response protein AidB N-terminal domain X993_RS07540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS07540 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS07545 PF00171 Aldehyde dehydrogenase family X993_RS07555 PF01636 Phosphotransferase enzyme family X993_RS07565 PF07690 Major Facilitator Superfamily X993_RS07580 PF00248 Aldo/keto reductase family X993_RS07600 PF02772 S-adenosylmethionine synthetase, central domain X993_RS07600 PF00438 S-adenosylmethionine synthetase, N-terminal domain X993_RS07600 PF02773 S-adenosylmethionine synthetase, C-terminal domain X993_RS07605 PF03279 Bacterial lipid A biosynthesis acyltransferase X993_RS07610 PF01678 Diaminopimelate epimerase X993_RS07620 PF00589 Phage integrase family X993_RS07620 PF02899 Phage integrase, N-terminal SAM-like domain X993_RS07625 PF17785 PUA-like domain X993_RS07625 PF10672 S-adenosylmethionine-dependent methyltransferase X993_RS07630 PF07683 Cobalamin synthesis protein cobW C-terminal domain X993_RS07630 PF02492 CobW/HypB/UreG, nucleotide-binding domain X993_RS07635 PF01258 Prokaryotic dksA/traR C4-type zinc finger X993_RS07640 PF00227 Proteasome subunit X993_RS07645 PF00004 ATPase family associated with various cellular activities (AAA) X993_RS07645 PF07724 AAA domain (Cdc48 subfamily) X993_RS07655 PF13333 Integrase core domain X993_RS07655 PF00665 Integrase core domain X993_RS07655 PF13276 HTH-like domain X993_RS07660 PF00072 Response regulator receiver domain X993_RS07665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS07665 PF00512 His Kinase A (phospho-acceptor) domain X993_RS07675 PF00696 Amino acid kinase family X993_RS07685 PF00440 Bacterial regulatory proteins, tetR family X993_RS07690 PF00561 alpha/beta hydrolase fold X993_RS07700 PF07690 Major Facilitator Superfamily X993_RS07710 PF06719 AraC-type transcriptional regulator N-terminus X993_RS07710 PF12833 Helix-turn-helix domain X993_RS07715 PF08240 Alcohol dehydrogenase GroES-like domain X993_RS07715 PF00107 Zinc-binding dehydrogenase X993_RS07720 PF03372 Endonuclease/Exonuclease/phosphatase family X993_RS07725 PF03976 Polyphosphate kinase 2 (PPK2) X993_RS07730 PF02934 GatB/GatE catalytic domain X993_RS07730 PF02637 GatB domain X993_RS07735 PF01425 Amidase X993_RS07740 PF02686 Glu-tRNAGln amidotransferase C subunit X993_RS07760 PF03717 Penicillin-binding Protein dimerisation domain X993_RS07760 PF00905 Penicillin binding protein transpeptidase domain X993_RS07765 PF01098 Cell cycle protein X993_RS07775 PF03328 HpcH/HpaI aldolase/citrate lyase family X993_RS07785 PF01242 6-pyruvoyl tetrahydropterin synthase X993_RS07795 PF06508 Queuosine biosynthesis protein QueC X993_RS07805 PF02954 Bacterial regulatory protein, Fis family X993_RS07805 PF00072 Response regulator receiver domain X993_RS07805 PF00158 Sigma-54 interaction domain X993_RS07810 PF00512 His Kinase A (phospho-acceptor) domain X993_RS07810 PF00989 PAS fold X993_RS07810 PF00672 HAMP domain X993_RS07810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS07820 PF01029 NusB family X993_RS07820 PF01189 16S rRNA methyltransferase RsmB/F X993_RS07825 PF01435 Peptidase family M48 X993_RS07830 PF01810 LysE type translocator X993_RS07835 PF00551 Formyl transferase X993_RS07835 PF02911 Formyl transferase, C-terminal domain X993_RS07840 PF01327 Polypeptide deformylase X993_RS07845 PF17782 DprA winged helix domain X993_RS07845 PF02481 DNA recombination-mediator protein A X993_RS07855 PF01131 DNA topoisomerase X993_RS07855 PF01751 Toprim domain X993_RS07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS07860 PF03466 LysR substrate binding domain X993_RS07865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain X993_RS07865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain X993_RS07910 PF00795 Carbon-nitrogen hydrolase X993_RS07915 PF00850 Histone deacetylase domain X993_RS07920 PF13416 Bacterial extracellular solute-binding protein X993_RS07925 PF03466 LysR substrate binding domain X993_RS07925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS07945 PF04539 Sigma-70 region 3 X993_RS07945 PF03979 Sigma-70 factor, region 1.1 X993_RS07945 PF04542 Sigma-70 region 2 X993_RS07945 PF04546 Sigma-70, non-essential region X993_RS07945 PF00140 Sigma-70 factor, region 1.2 X993_RS07945 PF04545 Sigma-70, region 4 X993_RS07950 PF04262 Glutamate-cysteine ligase X993_RS07955 PF06029 AlkA N-terminal domain X993_RS07955 PF00730 HhH-GPD superfamily base excision DNA repair protein X993_RS07955 PF12833 Helix-turn-helix domain X993_RS07955 PF02805 Metal binding domain of Ada X993_RS07960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain X993_RS07960 PF12833 Helix-turn-helix domain X993_RS07960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain X993_RS07960 PF02805 Metal binding domain of Ada X993_RS07970 PF07152 YaeQ protein X993_RS07980 PF13302 Acetyltransferase (GNAT) domain X993_RS08000 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 X993_RS08000 PF13542 Helix-turn-helix domain of transposase family ISL3 X993_RS08000 PF01610 Transposase X993_RS08010 PF01527 Transposase X993_RS08015 PF13683 Integrase core domain X993_RS08015 PF13276 HTH-like domain X993_RS08020 PF00665 Integrase core domain X993_RS08020 PF13276 HTH-like domain X993_RS08020 PF13333 Integrase core domain X993_RS08030 PF00239 Resolvase, N terminal domain X993_RS08030 PF02796 Helix-turn-helix domain of resolvase X993_RS08075 PF08401 Domain of unknown function (DUF1738) X993_RS08075 PF13362 Toprim domain X993_RS08075 PF18818 Metallopeptidase superfamily domain X993_RS08085 PF00589 Phage integrase family X993_RS08085 PF13356 Arm DNA-binding domain X993_RS08090 PF01926 50S ribosome-binding GTPase X993_RS08090 PF12631 MnmE helical domain X993_RS08090 PF10396 GTP-binding protein TrmE N-terminus X993_RS08100 PF02096 60Kd inner membrane protein X993_RS08100 PF14849 YidC periplasmic domain X993_RS08105 PF01809 Putative membrane protein insertion efficiency factor X993_RS08110 PF00825 Ribonuclease P X993_RS08115 PF00468 Ribosomal protein L34 X993_RS08120 PF11638 DnaA N-terminal domain X993_RS08120 PF08299 Bacterial dnaA protein helix-turn-helix X993_RS08120 PF00308 Bacterial dnaA protein X993_RS08125 PF00712 DNA polymerase III beta subunit, N-terminal domain X993_RS08125 PF02767 DNA polymerase III beta subunit, central domain X993_RS08125 PF02768 DNA polymerase III beta subunit, C-terminal domain X993_RS08130 PF00204 DNA gyrase B X993_RS08130 PF01751 Toprim domain X993_RS08130 PF18053 DNA gyrase B subunit insert domain X993_RS08130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS08130 PF00986 DNA gyrase B subunit, carboxyl terminus X993_RS08140 PF01527 Transposase X993_RS08145 PF01527 Transposase X993_RS08155 PF00199 Catalase X993_RS08160 PF08281 Sigma-70, region 4 X993_RS08160 PF04542 Sigma-70 region 2 X993_RS08195 PF02515 CoA-transferase family III X993_RS08200 PF00378 Enoyl-CoA hydratase/isomerase X993_RS08200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain X993_RS08200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain X993_RS08205 PF02803 Thiolase, C-terminal domain X993_RS08205 PF00108 Thiolase, N-terminal domain X993_RS08215 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS08215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS08215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X993_RS08240 PF03551 Transcriptional regulator PadR-like family X993_RS08245 PF00732 GMC oxidoreductase X993_RS08245 PF05199 GMC oxidoreductase X993_RS08255 PF17409 MoaF C-terminal domain X993_RS08255 PF10703 MoaF N-terminal domain X993_RS08265 PF00171 Aldehyde dehydrogenase family X993_RS08280 PF02653 Branched-chain amino acid transport system / permease component X993_RS08280 PF11862 Domain of unknown function (DUF3382) X993_RS08285 PF00005 ABC transporter X993_RS08285 PF12399 Branched-chain amino acid ATP-binding cassette transporter X993_RS08290 PF00005 ABC transporter X993_RS08300 PF13609 Gram-negative porin X993_RS08305 PF08774 VRR-NUC domain X993_RS08305 PF04851 Type III restriction enzyme, res subunit X993_RS08310 PF01555 DNA methylase X993_RS08310 PF18273 Type III R-M EcoP15I C-terminal domain X993_RS08315 PF13609 Gram-negative porin X993_RS08320 PF00486 Transcriptional regulatory protein, C terminal X993_RS08320 PF00072 Response regulator receiver domain X993_RS08325 PF00512 His Kinase A (phospho-acceptor) domain X993_RS08325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS08330 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS08335 PF00005 ABC transporter X993_RS08355 PF00376 MerR family regulatory protein X993_RS08355 PF09278 MerR, DNA binding X993_RS08360 PF01311 Bacterial export proteins, family 1 X993_RS08365 PF01313 Bacterial export proteins, family 3 X993_RS08370 PF00813 FliP family X993_RS08375 PF04347 Flagellar biosynthesis protein, FliO X993_RS08380 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term X993_RS08380 PF16973 Flagellar motor switch protein FliN N-terminal X993_RS08385 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term X993_RS08385 PF02154 Flagellar motor switch protein FliM X993_RS08400 PF04172 LrgB-like family X993_RS08405 PF03788 LrgA family X993_RS08410 PF03466 LysR substrate binding domain X993_RS08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS08415 PF07690 Major Facilitator Superfamily X993_RS08420 PF01047 MarR family X993_RS08430 PF02321 Outer membrane efflux protein X993_RS08450 PF03934 Type II secretion system (T2SS), protein K X993_RS08460 PF07963 Prokaryotic N-terminal methylation motif X993_RS08460 PF02501 Type II secretion system (T2SS), protein I X993_RS08465 PF12019 Type II transport protein GspH X993_RS08465 PF07963 Prokaryotic N-terminal methylation motif X993_RS08470 PF08334 Type II secretion system (T2SS), protein G X993_RS08470 PF07963 Prokaryotic N-terminal methylation motif X993_RS08480 PF00482 Type II secretion system (T2SS), protein F X993_RS08485 PF00437 Type II/IV secretion system protein X993_RS08490 PF00263 Bacterial type II and III secretion system protein X993_RS08490 PF03958 Bacterial type II/III secretion system short domain X993_RS08495 PF01464 Transglycosylase SLT domain X993_RS08500 PF02492 CobW/HypB/UreG, nucleotide-binding domain X993_RS08500 PF07683 Cobalamin synthesis protein cobW C-terminal domain X993_RS08505 PF00216 Bacterial DNA-binding protein X993_RS08510 PF05430 S-adenosyl-L-methionine-dependent methyltransferase X993_RS08510 PF01266 FAD dependent oxidoreductase X993_RS08520 PF04107 Glutamate-cysteine ligase family 2(GCS2) X993_RS08530 PF00958 GMP synthase C terminal domain X993_RS08530 PF02540 NAD synthase X993_RS08530 PF00117 Glutamine amidotransferase class-I X993_RS08535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family X993_RS08550 PF08521 Two-component sensor kinase N-terminal X993_RS08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS08550 PF00512 His Kinase A (phospho-acceptor) domain X993_RS08555 PF00072 Response regulator receiver domain X993_RS08555 PF00486 Transcriptional regulatory protein, C terminal X993_RS08565 PF01329 Pterin 4 alpha carbinolamine dehydratase X993_RS08575 PF01037 Lrp/AsnC ligand binding domain X993_RS08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS08585 PF03466 LysR substrate binding domain X993_RS08590 PF00171 Aldehyde dehydrogenase family X993_RS08595 PF00732 GMC oxidoreductase X993_RS08595 PF05199 GMC oxidoreductase X993_RS08600 PF12399 Branched-chain amino acid ATP-binding cassette transporter X993_RS08600 PF00005 ABC transporter X993_RS08605 PF00005 ABC transporter X993_RS08615 PF02653 Branched-chain amino acid transport system / permease component X993_RS08640 PF00005 ABC transporter X993_RS08640 PF12399 Branched-chain amino acid ATP-binding cassette transporter X993_RS08645 PF00005 ABC transporter X993_RS08650 PF01134 Glucose inhibited division protein A X993_RS08650 PF13932 GidA associated domain X993_RS08655 PF02527 rRNA small subunit methyltransferase G X993_RS08660 PF13614 AAA domain X993_RS08665 PF02195 ParB-like nuclease domain X993_RS08665 PF17762 HTH domain found in ParB protein X993_RS08670 PF03600 Citrate transporter X993_RS08680 PF00119 ATP synthase A chain X993_RS08685 PF00137 ATP synthase subunit C X993_RS08690 PF00430 ATP synthase B/B' CF(0) X993_RS08695 PF00213 ATP synthase delta (OSCP) subunit X993_RS08700 PF02874 ATP synthase alpha/beta family, beta-barrel domain X993_RS08700 PF00306 ATP synthase alpha/beta chain, C terminal domain X993_RS08700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain X993_RS08705 PF00231 ATP synthase X993_RS08710 PF02874 ATP synthase alpha/beta family, beta-barrel domain X993_RS08710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain X993_RS08715 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain X993_RS08715 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain X993_RS08720 PF13193 AMP-binding enzyme C-terminal domain X993_RS08720 PF00501 AMP-binding enzyme X993_RS08725 PF13380 CoA binding domain X993_RS08730 PF00497 Bacterial extracellular solute-binding proteins, family 3 X993_RS08735 PF01208 Uroporphyrinogen decarboxylase (URO-D) X993_RS08740 PF00270 DEAD/DEAH box helicase X993_RS08740 PF00271 Helicase conserved C-terminal domain X993_RS08740 PF18319 PriA DNA helicase Cys-rich region (CRR) domain X993_RS08740 PF17764 3′ DNA-binding domain (3′BD) X993_RS08740 PF18074 Primosomal protein N C-terminal domain X993_RS08750 PF00171 Aldehyde dehydrogenase family X993_RS08750 PF14850 DNA-binding domain of Proline dehydrogenase X993_RS08750 PF18327 Proline utilization A proline dehydrogenase N-terminal domain X993_RS08750 PF01619 Proline dehydrogenase X993_RS08755 PF13458 Periplasmic binding protein X993_RS08760 PF13193 AMP-binding enzyme C-terminal domain X993_RS08760 PF00501 AMP-binding enzyme X993_RS08765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS08765 PF18158 Adaptive response protein AidB N-terminal domain X993_RS08765 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS08785 PF00155 Aminotransferase class I and II X993_RS08790 PF00497 Bacterial extracellular solute-binding proteins, family 3 X993_RS08800 PF01565 FAD binding domain X993_RS08800 PF02913 FAD linked oxidases, C-terminal domain X993_RS08810 PF13411 MerR HTH family regulatory protein X993_RS08815 PF00403 Heavy-metal-associated domain X993_RS08830 PF05552 Conserved TM helix X993_RS08845 PF13520 Amino acid permease X993_RS08850 PF06751 Ethanolamine ammonia lyase large subunit (EutB) X993_RS08855 PF05985 Ethanolamine ammonia-lyase light chain (EutC) X993_RS08865 PF00171 Aldehyde dehydrogenase family X993_RS08870 PF12833 Helix-turn-helix domain X993_RS08880 PF00205 Thiamine pyrophosphate enzyme, central domain X993_RS08880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X993_RS08880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X993_RS08890 PF03313 Serine dehydratase alpha chain X993_RS08890 PF03315 Serine dehydratase beta chain X993_RS08900 PF02347 Glycine cleavage system P-protein X993_RS08905 PF01597 Glycine cleavage H-protein X993_RS08910 PF01571 Aminomethyltransferase folate-binding domain X993_RS08910 PF08669 Glycine cleavage T-protein C-terminal barrel domain X993_RS08920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold X993_RS08920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain X993_RS08935 PF00580 UvrD/REP helicase N-terminal domain X993_RS08935 PF13361 UvrD-like helicase C-terminal domain X993_RS08940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III X993_RS08955 PF05930 Prophage CP4-57 regulatory protein (AlpA) X993_RS08975 PF16793 RepB DNA-primase from phage plasmid X993_RS08975 PF03389 MobA/MobL family X993_RS09045 PF09588 YqaJ-like viral recombinase domain X993_RS09060 PF02384 N-6 DNA Methylase X993_RS09060 PF12161 HsdM N-terminal domain X993_RS09070 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) X993_RS09070 PF18766 SWI2/SNF2 ATPase X993_RS09070 PF11867 Domain of unknown function (DUF3387) X993_RS09090 PF01548 Transposase X993_RS09090 PF02371 Transposase IS116/IS110/IS902 family X993_RS09160 PF13276 HTH-like domain X993_RS09160 PF13683 Integrase core domain X993_RS09165 PF01527 Transposase X993_RS09170 PF00589 Phage integrase family X993_RS09195 PF18416 N-acetylglucosamine binding protein domain 2 X993_RS09195 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading X993_RS09200 PF01565 FAD binding domain X993_RS09200 PF08031 Berberine and berberine like X993_RS09210 PF02203 Tar ligand binding domain homologue X993_RS09210 PF00672 HAMP domain X993_RS09210 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS09215 PF00561 alpha/beta hydrolase fold X993_RS09225 PF03783 Curli production assembly/transport component CsgG X993_RS09235 PF05643 Putative bacterial lipoprotein (DUF799) X993_RS09240 PF04185 Phosphoesterase family X993_RS09265 PF00355 Rieske [2Fe-2S] domain X993_RS09265 PF00848 Ring hydroxylating alpha subunit (catalytic domain) X993_RS09280 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal X993_RS09280 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III X993_RS09290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III X993_RS09290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal X993_RS09295 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family X993_RS09315 PF00669 Bacterial flagellin N-terminal helical region X993_RS09315 PF00700 Bacterial flagellin C-terminal helical region X993_RS09320 PF01165 Ribosomal protein S21 X993_RS09325 PF03352 Methyladenine glycosylase X993_RS09325 PF00958 GMP synthase C terminal domain X993_RS09325 PF13673 Acetyltransferase (GNAT) domain X993_RS09325 PF13302 Acetyltransferase (GNAT) domain X993_RS09325 PF00117 Glutamine amidotransferase class-I X993_RS09340 PF00230 Major intrinsic protein X993_RS09350 PF13439 Glycosyltransferase Family 4 X993_RS09355 PF05247 Flagellar transcriptional activator (FlhD) X993_RS09360 PF05280 Flagellar transcriptional activator (FlhC) X993_RS09365 PF01618 MotA/TolQ/ExbB proton channel family X993_RS09370 PF00691 OmpA family X993_RS09370 PF13677 Membrane MotB of proton-channel complex MotA/MotB X993_RS09375 PF01339 CheB methylesterase X993_RS09375 PF00072 Response regulator receiver domain X993_RS09380 PF01584 CheW-like domain X993_RS09380 PF09078 CheY binding X993_RS09380 PF02895 Signal transducing histidine kinase, homodimeric domain X993_RS09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS09380 PF01627 Hpt domain X993_RS09385 PF01584 CheW-like domain X993_RS09390 PF02203 Tar ligand binding domain homologue X993_RS09390 PF00672 HAMP domain X993_RS09390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS09395 PF01739 CheR methyltransferase, SAM binding domain X993_RS09395 PF03705 CheR methyltransferase, all-alpha domain X993_RS09400 PF03975 CheD chemotactic sensory transduction X993_RS09405 PF01339 CheB methylesterase X993_RS09405 PF00072 Response regulator receiver domain X993_RS09410 PF00072 Response regulator receiver domain X993_RS09415 PF04344 Chemotaxis phosphatase, CheZ X993_RS09435 PF01312 FlhB HrpN YscU SpaS Family X993_RS09440 PF00771 FHIPEP family X993_RS09445 PF00448 SRP54-type protein, GTPase domain X993_RS09445 PF00448 SRP54-type protein, GTPase domain X993_RS09455 PF04542 Sigma-70 region 2 X993_RS09455 PF04539 Sigma-70 region 3 X993_RS09455 PF04545 Sigma-70, region 4 X993_RS09460 PF05221 S-adenosyl-L-homocysteine hydrolase X993_RS09460 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain X993_RS09465 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV X993_RS09470 PF02219 Methylenetetrahydrofolate reductase X993_RS09475 PF01425 Amidase X993_RS09480 PF01738 Dienelactone hydrolase family X993_RS09485 PF03060 Nitronate monooxygenase X993_RS09490 PF13458 Periplasmic binding protein X993_RS09495 PF07690 Major Facilitator Superfamily X993_RS09510 PF01545 Cation efflux family X993_RS09510 PF16916 Dimerisation domain of Zinc Transporter X993_RS09515 PF01037 Lrp/AsnC ligand binding domain X993_RS09525 PF00753 Metallo-beta-lactamase superfamily X993_RS09530 PF05036 Sporulation related domain X993_RS09530 PF03330 Lytic transglycolase X993_RS09535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases X993_RS09540 PF02021 Uncharacterised protein family UPF0102 X993_RS09545 PF13580 SIS domain X993_RS09550 PF04972 BON domain X993_RS09555 PF00034 Cytochrome c X993_RS09565 PF00324 Amino acid permease X993_RS09595 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase X993_RS09595 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase X993_RS09600 PF01810 LysE type translocator X993_RS09605 PF07690 Major Facilitator Superfamily X993_RS09610 PF03466 LysR substrate binding domain X993_RS09610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS09615 PF01610 Transposase X993_RS09615 PF13542 Helix-turn-helix domain of transposase family ISL3 X993_RS09615 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 X993_RS09620 PF03922 OmpW family X993_RS09635 PF01118 Semialdehyde dehydrogenase, NAD binding domain X993_RS09640 PF03358 NADPH-dependent FMN reductase X993_RS09645 PF01161 Phosphatidylethanolamine-binding protein X993_RS09650 PF00156 Phosphoribosyl transferase domain X993_RS09655 PF00390 Malic enzyme, N-terminal domain X993_RS09655 PF03949 Malic enzyme, NAD binding domain X993_RS09655 PF01515 Phosphate acetyl/butaryl transferase X993_RS09670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily X993_RS09675 PF01037 Lrp/AsnC ligand binding domain X993_RS09675 PF13404 AsnC-type helix-turn-helix domain X993_RS09685 PF17932 Tetracyclin repressor-like, C-terminal domain X993_RS09685 PF00440 Bacterial regulatory proteins, tetR family X993_RS09695 PF00111 2Fe-2S iron-sulfur cluster binding domain X993_RS09695 PF00970 Oxidoreductase FAD-binding domain X993_RS09695 PF00175 Oxidoreductase NAD-binding domain X993_RS09700 PF01883 Iron-sulfur cluster assembly protein X993_RS09705 PF05138 Phenylacetic acid catabolic protein X993_RS09710 PF06243 Phenylacetic acid degradation B X993_RS09715 PF05138 Phenylacetic acid catabolic protein X993_RS09765 PF03143 Elongation factor Tu C-terminal domain X993_RS09765 PF03144 Elongation factor Tu domain 2 X993_RS09765 PF00009 Elongation factor Tu GTP binding domain X993_RS09775 PF00584 SecE/Sec61-gamma subunits of protein translocation complex X993_RS09780 PF02357 Transcription termination factor nusG X993_RS09780 PF00467 KOW motif X993_RS09785 PF00298 Ribosomal protein L11, RNA binding domain X993_RS09785 PF03946 Ribosomal protein L11, N-terminal domain X993_RS09790 PF00687 Ribosomal protein L1p/L10e family X993_RS09795 PF00466 Ribosomal protein L10 X993_RS09800 PF16320 Ribosomal protein L7/L12 dimerisation domain X993_RS09800 PF00542 Ribosomal protein L7/L12 C-terminal domain X993_RS09805 PF04560 RNA polymerase Rpb2, domain 7 X993_RS09805 PF04561 RNA polymerase Rpb2, domain 2 X993_RS09805 PF04565 RNA polymerase Rpb2, domain 3 X993_RS09805 PF04563 RNA polymerase beta subunit X993_RS09805 PF00562 RNA polymerase Rpb2, domain 6 X993_RS09805 PF10385 RNA polymerase beta subunit external 1 domain X993_RS09810 PF00623 RNA polymerase Rpb1, domain 2 X993_RS09810 PF05000 RNA polymerase Rpb1, domain 4 X993_RS09810 PF04983 RNA polymerase Rpb1, domain 3 X993_RS09810 PF04998 RNA polymerase Rpb1, domain 5 X993_RS09810 PF04997 RNA polymerase Rpb1, domain 1 X993_RS09815 PF00270 DEAD/DEAH box helicase X993_RS09815 PF16124 RecQ zinc-binding X993_RS09815 PF09382 RQC domain X993_RS09815 PF00271 Helicase conserved C-terminal domain X993_RS09815 PF00570 HRDC domain X993_RS09820 PF00164 Ribosomal protein S12/S23 X993_RS09825 PF00177 Ribosomal protein S7p/S5e X993_RS09830 PF14492 Elongation Factor G, domain II X993_RS09830 PF03764 Elongation factor G, domain IV X993_RS09830 PF00009 Elongation factor Tu GTP binding domain X993_RS09830 PF00679 Elongation factor G C-terminus X993_RS09830 PF03144 Elongation factor Tu domain 2 X993_RS09835 PF03144 Elongation factor Tu domain 2 X993_RS09835 PF03143 Elongation factor Tu C-terminal domain X993_RS09835 PF00009 Elongation factor Tu GTP binding domain X993_RS09840 PF00338 Ribosomal protein S10p/S20e X993_RS09845 PF00297 Ribosomal protein L3 X993_RS09850 PF00573 Ribosomal protein L4/L1 family X993_RS09855 PF00276 Ribosomal protein L23 X993_RS09860 PF03947 Ribosomal Proteins L2, C-terminal domain X993_RS09860 PF00181 Ribosomal Proteins L2, RNA binding domain X993_RS09865 PF00203 Ribosomal protein S19 X993_RS09870 PF00237 Ribosomal protein L22p/L17e X993_RS09875 PF00189 Ribosomal protein S3, C-terminal domain X993_RS09875 PF07650 KH domain X993_RS09880 PF00252 Ribosomal protein L16p/L10e X993_RS09885 PF00831 Ribosomal L29 protein X993_RS09890 PF00366 Ribosomal protein S17 X993_RS09895 PF00238 Ribosomal protein L14p/L23e X993_RS09900 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 X993_RS09905 PF00673 ribosomal L5P family C-terminus X993_RS09905 PF00281 Ribosomal protein L5 X993_RS09910 PF00253 Ribosomal protein S14p/S29e X993_RS09915 PF00410 Ribosomal protein S8 X993_RS09920 PF00347 Ribosomal protein L6 X993_RS09925 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast X993_RS09930 PF00333 Ribosomal protein S5, N-terminal domain X993_RS09930 PF03719 Ribosomal protein S5, C-terminal domain X993_RS09935 PF00327 Ribosomal protein L30p/L7e X993_RS09940 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A X993_RS09945 PF00344 SecY translocase X993_RS09950 PF01176 Translation initiation factor 1A / IF-1 X993_RS09955 PF00444 Ribosomal protein L36 X993_RS09960 PF00416 Ribosomal protein S13/S18 X993_RS09965 PF00411 Ribosomal protein S11 X993_RS09970 PF00163 Ribosomal protein S4/S9 N-terminal domain X993_RS09970 PF01479 S4 domain X993_RS09975 PF01000 RNA polymerase Rpb3/RpoA insert domain X993_RS09975 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain X993_RS09975 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain X993_RS09980 PF01196 Ribosomal protein L17 X993_RS09990 PF02683 Cytochrome C biogenesis protein transmembrane region X993_RS09990 PF11412 Disulphide bond corrector protein DsbC X993_RS09995 PF00490 Delta-aminolevulinic acid dehydratase X993_RS10000 PF01926 50S ribosome-binding GTPase X993_RS10005 PF00034 Cytochrome c X993_RS10010 PF05140 ResB-like family X993_RS10015 PF01578 Cytochrome C assembly protein X993_RS10020 PF00174 Oxidoreductase molybdopterin binding domain X993_RS10025 PF01794 Ferric reductase like transmembrane component X993_RS10030 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain X993_RS10030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain X993_RS10040 PF01491 Frataxin-like domain X993_RS10045 PF00905 Penicillin binding protein transpeptidase domain X993_RS10045 PF00912 Transglycosylase X993_RS10045 PF17092 Penicillin-binding protein OB-like domain X993_RS10065 PF07660 Secretin and TonB N terminus short domain X993_RS10065 PF11741 AMIN domain X993_RS10065 PF00263 Bacterial type II and III secretion system protein X993_RS10065 PF03958 Bacterial type II/III secretion system short domain X993_RS10070 PF01202 Shikimate kinase X993_RS10075 PF01761 3-dehydroquinate synthase X993_RS10080 PF01966 HD domain X993_RS10080 PF13286 Phosphohydrolase-associated domain X993_RS10085 PF13416 Bacterial extracellular solute-binding protein X993_RS10090 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS10095 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS10100 PF00005 ABC transporter X993_RS10100 PF17912 MalK OB fold domain X993_RS10105 PF03009 Glycerophosphoryl diester phosphodiesterase family X993_RS10120 PF01493 GXGXG motif X993_RS10120 PF01645 Conserved region in glutamate synthase X993_RS10120 PF00310 Glutamine amidotransferases class-II X993_RS10120 PF04898 Glutamate synthase central domain X993_RS10125 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster X993_RS10125 PF07992 Pyridine nucleotide-disulphide oxidoreductase X993_RS10130 PF01235 Sodium:alanine symporter family X993_RS10140 PF06472 ABC transporter transmembrane region 2 X993_RS10140 PF00005 ABC transporter X993_RS10145 PF01266 FAD dependent oxidoreductase X993_RS10155 PF05690 Thiazole biosynthesis protein ThiG X993_RS10160 PF02581 Thiamine monophosphate synthase X993_RS10165 PF00005 ABC transporter X993_RS10170 PF02405 Permease MlaE X993_RS10175 PF02470 MlaD protein X993_RS10195 PF00005 ABC transporter X993_RS10200 PF01061 ABC-2 type transporter X993_RS10210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) X993_RS10215 PF01634 ATP phosphoribosyltransferase X993_RS10220 PF00815 Histidinol dehydrogenase X993_RS10225 PF00155 Aminotransferase class I and II X993_RS10230 PF00475 Imidazoleglycerol-phosphate dehydratase X993_RS10235 PF01914 MarC family integral membrane protein X993_RS10240 PF00117 Glutamine amidotransferase class-I X993_RS10245 PF00977 Histidine biosynthesis protein X993_RS10250 PF00977 Histidine biosynthesis protein X993_RS10255 PF01502 Phosphoribosyl-AMP cyclohydrolase X993_RS10260 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase X993_RS10275 PF02416 mttA/Hcf106 family X993_RS10280 PF02416 mttA/Hcf106 family X993_RS10285 PF00902 Sec-independent protein translocase protein (TatC) X993_RS10290 PF13180 PDZ domain X993_RS10290 PF17820 PDZ domain X993_RS10295 PF01784 NIF3 (NGG1p interacting factor 3) X993_RS10300 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal X993_RS10300 PF00355 Rieske [2Fe-2S] domain X993_RS10305 PF00032 Cytochrome b(C-terminal)/b6/petD X993_RS10305 PF00033 Cytochrome b/b6/petB X993_RS10310 PF02167 Cytochrome C1 family X993_RS10315 PF00043 Glutathione S-transferase, C-terminal domain X993_RS10315 PF02798 Glutathione S-transferase, N-terminal domain X993_RS10320 PF04386 Stringent starvation protein B X993_RS10350 PF02384 N-6 DNA Methylase X993_RS10355 PF18766 SWI2/SNF2 ATPase X993_RS10355 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) X993_RS10355 PF11867 Domain of unknown function (DUF3387) X993_RS10370 PF05973 Phage derived protein Gp49-like (DUF891) X993_RS10375 PF00589 Phage integrase family X993_RS10375 PF13356 Arm DNA-binding domain X993_RS10405 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE X993_RS10420 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 X993_RS10425 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath X993_RS10440 PF05947 Type VI secretion system, TssF X993_RS10450 PF07724 AAA domain (Cdc48 subfamily) X993_RS10450 PF00004 ATPase family associated with various cellular activities (AAA) X993_RS10450 PF10431 C-terminal, D2-small domain, of ClpB protein X993_RS10450 PF17871 AAA lid domain X993_RS10460 PF00691 OmpA family X993_RS10470 PF14331 ImcF-related N-terminal domain X993_RS10470 PF06744 Type VI secretion protein IcmF C-terminal X993_RS10470 PF06761 Intracellular multiplication and human macrophage-killing X993_RS10495 PF00664 ABC transporter transmembrane region X993_RS10495 PF00005 ABC transporter X993_RS10495 PF03412 Peptidase C39 family X993_RS10500 PF00529 HlyD membrane-fusion protein of T1SS X993_RS10500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion X993_RS10515 PF01433 Peptidase family M1 domain X993_RS10515 PF11838 ERAP1-like C-terminal domain X993_RS10565 PF00012 Hsp70 protein X993_RS10570 PF00313 'Cold-shock' DNA-binding domain X993_RS10575 PF13520 Amino acid permease X993_RS10580 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase X993_RS10585 PF02441 Flavoprotein X993_RS10590 PF00462 Glutaredoxin X993_RS10595 PF17827 PrmC N-terminal domain X993_RS10595 PF05175 Methyltransferase small domain X993_RS10600 PF03462 PCRF domain X993_RS10600 PF00472 RF-1 domain X993_RS10605 PF01488 Shikimate / quinate 5-dehydrogenase X993_RS10605 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain X993_RS10605 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain X993_RS10620 PF00557 Metallopeptidase family M24 X993_RS10620 PF01321 Creatinase/Prolidase N-terminal domain X993_RS10625 PF00857 Isochorismatase family X993_RS10635 PF12848 ABC transporter X993_RS10635 PF00005 ABC transporter X993_RS10650 PF03009 Glycerophosphoryl diester phosphodiesterase family X993_RS10660 PF00324 Amino acid permease X993_RS10670 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit X993_RS10680 PF06071 Protein of unknown function (DUF933) X993_RS10680 PF01926 50S ribosome-binding GTPase X993_RS10705 PF01494 FAD binding domain X993_RS10710 PF10411 Disulfide bond isomerase protein N-terminus X993_RS10710 PF13098 Thioredoxin-like domain X993_RS10720 PF02525 Flavodoxin-like fold X993_RS10725 PF03167 Uracil DNA glycosylase superfamily X993_RS10735 PF00218 Indole-3-glycerol phosphate synthase X993_RS10740 PF00591 Glycosyl transferase family, a/b domain X993_RS10740 PF02885 Glycosyl transferase family, helical bundle domain X993_RS10745 PF00117 Glutamine amidotransferase class-I X993_RS10750 PF04715 Anthranilate synthase component I, N terminal region X993_RS10750 PF00425 chorismate binding enzyme X993_RS10755 PF13419 Haloacid dehalogenase-like hydrolase X993_RS10760 PF00834 Ribulose-phosphate 3 epimerase family X993_RS10765 PF04379 ApaG domain X993_RS10775 PF03562 MltA specific insert domain X993_RS10775 PF06725 3D domain X993_RS10780 PF00501 AMP-binding enzyme X993_RS10780 PF14535 AMP-binding enzyme C-terminal domain X993_RS10785 PF03061 Thioesterase superfamily X993_RS10790 PF00378 Enoyl-CoA hydratase/isomerase X993_RS10795 PF02803 Thiolase, C-terminal domain X993_RS10795 PF00108 Thiolase, N-terminal domain X993_RS10805 PF00378 Enoyl-CoA hydratase/isomerase X993_RS10835 PF01568 Molydopterin dinucleotide binding domain X993_RS10835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain X993_RS10835 PF00384 Molybdopterin oxidoreductase X993_RS10840 PF00501 AMP-binding enzyme X993_RS10840 PF13193 AMP-binding enzyme C-terminal domain X993_RS10845 PF13609 Gram-negative porin X993_RS10850 PF03232 Ubiquinone biosynthesis protein COQ7 X993_RS10855 PF02381 MraZ protein, putative antitoxin-like X993_RS10860 PF01795 MraW methylase family X993_RS10865 PF04999 Cell division protein FtsL X993_RS10870 PF00905 Penicillin binding protein transpeptidase domain X993_RS10870 PF03717 Penicillin-binding Protein dimerisation domain X993_RS10875 PF08245 Mur ligase middle domain X993_RS10875 PF02875 Mur ligase family, glutamate ligase domain X993_RS10880 PF02875 Mur ligase family, glutamate ligase domain X993_RS10880 PF08245 Mur ligase middle domain X993_RS10880 PF01225 Mur ligase family, catalytic domain X993_RS10885 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 X993_RS10885 PF00953 Glycosyl transferase family 4 X993_RS10890 PF08245 Mur ligase middle domain X993_RS10890 PF02875 Mur ligase family, glutamate ligase domain X993_RS10895 PF01098 Cell cycle protein X993_RS10900 PF04101 Glycosyltransferase family 28 C-terminal domain X993_RS10900 PF03033 Glycosyltransferase family 28 N-terminal domain X993_RS10905 PF08245 Mur ligase middle domain X993_RS10905 PF02875 Mur ligase family, glutamate ligase domain X993_RS10905 PF01225 Mur ligase family, catalytic domain X993_RS10910 PF01820 D-ala D-ala ligase N-terminus X993_RS10910 PF07478 D-ala D-ala ligase C-terminus X993_RS10915 PF03799 Cell division protein FtsQ X993_RS10915 PF08478 POTRA domain, FtsQ-type X993_RS10920 PF02491 SHS2 domain inserted in FTSA X993_RS10925 PF12327 FtsZ family, C-terminal domain X993_RS10925 PF00091 Tubulin/FtsZ family, GTPase domain X993_RS10930 PF08534 Redoxin X993_RS10935 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase X993_RS10950 PF02810 SEC-C motif X993_RS10950 PF01043 SecA preprotein cross-linking domain X993_RS10950 PF07517 SecA DEAD-like domain X993_RS10950 PF07516 SecA Wing and Scaffold domain X993_RS10955 PF01960 ArgJ family X993_RS10965 PF00293 NUDIX domain X993_RS10970 PF03884 DNA gyrase inhibitor YacG X993_RS10975 PF07072 Cell division protein X993_RS10980 PF01121 Dephospho-CoA kinase X993_RS10985 PF01478 Type IV leader peptidase family X993_RS10985 PF06750 Bacterial Peptidase A24 N-terminal domain X993_RS10990 PF00482 Type II secretion system (T2SS), protein F X993_RS10995 PF00437 Type II/IV secretion system protein X993_RS10995 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain X993_RS11000 PF00571 CBS domain X993_RS11000 PF03471 Transporter associated domain X993_RS11000 PF01595 Cyclin M transmembrane N-terminal domain X993_RS11010 PF00348 Polyprenyl synthetase X993_RS11015 PF00829 Ribosomal prokaryotic L21 protein X993_RS11020 PF01016 Ribosomal L27 protein X993_RS11025 PF01018 GTP1/OBG X993_RS11025 PF01926 50S ribosome-binding GTPase X993_RS11030 PF01472 PUA domain X993_RS11030 PF00696 Amino acid kinase family X993_RS11040 PF00293 NUDIX domain X993_RS11045 PF04073 Aminoacyl-tRNA editing domain X993_RS11045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) X993_RS11045 PF03129 Anticodon binding domain X993_RS11050 PF01914 MarC family integral membrane protein X993_RS11055 PF00156 Phosphoribosyl transferase domain X993_RS11060 PF00448 SRP54-type protein, GTPase domain X993_RS11060 PF02881 SRP54-type protein, helical bundle domain X993_RS11060 PF02978 Signal peptide binding domain X993_RS11065 PF01578 Cytochrome C assembly protein X993_RS11075 PF01510 N-acetylmuramoyl-L-alanine amidase X993_RS11080 PF02867 Ribonucleotide reductase, barrel domain X993_RS11080 PF00317 Ribonucleotide reductase, all-alpha domain X993_RS11080 PF03477 ATP cone domain X993_RS11085 PF00268 Ribonucleotide reductase, small chain X993_RS11100 PF00294 pfkB family carbohydrate kinase X993_RS11105 PF08534 Redoxin X993_RS11120 PF00289 Biotin carboxylase, N-terminal domain X993_RS11120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain X993_RS11120 PF02785 Biotin carboxylase C-terminal domain X993_RS11125 PF00364 Biotin-requiring enzyme X993_RS11130 PF01220 Dehydroquinase class II X993_RS11135 PF00578 AhpC/TSA family X993_RS11145 PF01225 Mur ligase family, catalytic domain X993_RS11145 PF08245 Mur ligase middle domain X993_RS11145 PF02875 Mur ligase family, glutamate ligase domain X993_RS11150 PF05728 Uncharacterised protein family (UPF0227) X993_RS11155 PF00773 RNB domain X993_RS11160 PF18317 Shikimate 5'-dehydrogenase C-terminal domain X993_RS11160 PF01488 Shikimate / quinate 5-dehydrogenase X993_RS11160 PF08501 Shikimate dehydrogenase substrate binding domain X993_RS11165 PF00912 Transglycosylase X993_RS11180 PF09339 IclR helix-turn-helix domain X993_RS11180 PF01614 Bacterial transcriptional regulator X993_RS11185 PF05035 2-keto-3-deoxy-galactonokinase X993_RS11190 PF02581 Thiamine monophosphate synthase X993_RS11200 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family X993_RS11205 PF00005 ABC transporter X993_RS11210 PF02653 Branched-chain amino acid transport system / permease component X993_RS11225 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family X993_RS11230 PF02464 Competence-damaged protein X993_RS11235 PF04608 Phosphatidylglycerophosphatase A X993_RS11240 PF02769 AIR synthase related protein, C-terminal domain X993_RS11240 PF00586 AIR synthase related protein, N-terminal domain X993_RS11245 PF00390 Malic enzyme, N-terminal domain X993_RS11245 PF01515 Phosphate acetyl/butaryl transferase X993_RS11245 PF03949 Malic enzyme, NAD binding domain X993_RS11265 PF04452 RNA methyltransferase X993_RS11275 PF17284 Spermidine synthase tetramerisation domain X993_RS11280 PF00456 Transketolase, thiamine diphosphate binding domain X993_RS11280 PF02780 Transketolase, C-terminal domain X993_RS11280 PF02779 Transketolase, pyrimidine binding domain X993_RS11285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain X993_RS11285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain X993_RS11290 PF07690 Major Facilitator Superfamily X993_RS11295 PF02560 Cyanate lyase C-terminal domain X993_RS11300 PF00484 Carbonic anhydrase X993_RS11305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS11305 PF03466 LysR substrate binding domain X993_RS11310 PF07729 FCD domain X993_RS11310 PF00392 Bacterial regulatory proteins, gntR family X993_RS11315 PF00375 Sodium:dicarboxylate symporter family X993_RS11320 PF03561 Allantoicase repeat X993_RS11325 PF04115 Ureidoglycolate lyase X993_RS11330 PF01475 Ferric uptake regulator family X993_RS11335 PF04355 SmpA / OmlA family X993_RS11340 PF01113 Dihydrodipicolinate reductase, N-terminus X993_RS11340 PF05173 Dihydrodipicolinate reductase, C-terminus X993_RS11345 PF01618 MotA/TolQ/ExbB proton channel family X993_RS11350 PF02472 Biopolymer transport protein ExbD/TolR X993_RS11355 PF13603 Leucyl-tRNA synthetase, Domain 2 X993_RS11355 PF08264 Anticodon-binding domain of tRNA X993_RS11355 PF00133 tRNA synthetases class I (I, L, M and V) X993_RS11355 PF09334 tRNA synthetases class I (M) X993_RS11365 PF14840 Processivity clamp loader gamma complex DNA pol III C-term X993_RS11365 PF06144 DNA polymerase III, delta subunit X993_RS11370 PF00171 Aldehyde dehydrogenase family X993_RS11375 PF03653 Uncharacterised protein family (UPF0093) X993_RS11380 PF02685 Glucokinase X993_RS11380 PF01418 Helix-turn-helix domain, rpiR family X993_RS11380 PF01380 SIS domain X993_RS11385 PF00920 Dehydratase family X993_RS11390 PF01081 KDPG and KHG aldolase X993_RS11395 PF02447 GntP family permease X993_RS11405 PF00206 Lyase X993_RS11405 PF08328 Adenylosuccinate lyase C-terminal X993_RS11410 PF07690 Major Facilitator Superfamily X993_RS11415 PF03466 LysR substrate binding domain X993_RS11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS11420 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain X993_RS11420 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase X993_RS11425 PF00497 Bacterial extracellular solute-binding proteins, family 3 X993_RS11430 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS11435 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS11440 PF00005 ABC transporter X993_RS11450 PF00166 Chaperonin 10 Kd subunit X993_RS11455 PF00011 Hsp20/alpha crystallin family X993_RS11460 PF00011 Hsp20/alpha crystallin family X993_RS11470 PF13230 Glutamine amidotransferases class-II X993_RS11475 PF01979 Amidohydrolase family X993_RS11490 PF00572 Ribosomal protein L13 X993_RS11495 PF00380 Ribosomal protein S9/S16 X993_RS11500 PF01521 Iron-sulphur cluster biosynthesis X993_RS11505 PF02311 AraC-like ligand binding domain X993_RS11505 PF12833 Helix-turn-helix domain X993_RS11510 PF02798 Glutathione S-transferase, N-terminal domain X993_RS11515 PF00043 Glutathione S-transferase, C-terminal domain X993_RS11515 PF02798 Glutathione S-transferase, N-terminal domain X993_RS11520 PF03702 Anhydro-N-acetylmuramic acid kinase X993_RS11525 PF00579 tRNA synthetases class I (W and Y) X993_RS11525 PF01479 S4 domain X993_RS11530 PF02580 D-Tyr-tRNA(Tyr) deacylase X993_RS11535 PF00300 Histidine phosphatase superfamily (branch 1) X993_RS11550 PF05491 RuvB C-terminal winged helix domain X993_RS11550 PF05496 Holliday junction DNA helicase RuvB P-loop domain X993_RS11550 PF17864 RuvB AAA lid domain X993_RS11555 PF07499 RuvA, C-terminal domain X993_RS11555 PF01330 RuvA N terminal domain X993_RS11560 PF02075 Crossover junction endodeoxyribonuclease RuvC X993_RS11570 PF02142 MGS-like domain X993_RS11570 PF01808 AICARFT/IMPCHase bienzyme X993_RS11575 PF02954 Bacterial regulatory protein, Fis family X993_RS11580 PF01207 Dihydrouridine synthase (Dus) X993_RS11585 PF01494 FAD binding domain X993_RS11590 PF00557 Metallopeptidase family M24 X993_RS11590 PF05195 Aminopeptidase P, N-terminal domain X993_RS11595 PF00043 Glutathione S-transferase, C-terminal domain X993_RS11595 PF13417 Glutathione S-transferase, N-terminal domain X993_RS11600 PF01645 Conserved region in glutamate synthase X993_RS11610 PF00293 NUDIX domain X993_RS11615 PF05222 Alanine dehydrogenase/PNT, N-terminal domain X993_RS11615 PF01262 Alanine dehydrogenase/PNT, C-terminal domain X993_RS11620 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch X993_RS11625 PF02233 NAD(P) transhydrogenase beta subunit X993_RS11655 PF02926 THUMP domain X993_RS11655 PF01170 Putative RNA methylase family UPF0020 X993_RS11675 PF02470 MlaD protein X993_RS11680 PF04403 Paraquat-inducible protein A X993_RS11695 PF04264 YceI-like domain X993_RS11700 PF04264 YceI-like domain X993_RS11705 PF07690 Major Facilitator Superfamily X993_RS11710 PF07549 SecD/SecF GG Motif X993_RS11710 PF02355 Protein export membrane protein X993_RS11715 PF13721 SecD export protein N-terminal TM region X993_RS11715 PF07549 SecD/SecF GG Motif X993_RS11715 PF02355 Protein export membrane protein X993_RS11720 PF02699 Preprotein translocase subunit X993_RS11725 PF01702 Queuine tRNA-ribosyltransferase X993_RS11730 PF02547 Queuosine biosynthesis protein X993_RS11735 PF17191 RecG wedge domain X993_RS11735 PF00271 Helicase conserved C-terminal domain X993_RS11735 PF00270 DEAD/DEAH box helicase X993_RS11740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS11740 PF03466 LysR substrate binding domain X993_RS11745 PF00141 Peroxidase X993_RS11755 PF00210 Ferritin-like domain X993_RS11765 PF01638 HxlR-like helix-turn-helix X993_RS11775 PF01040 UbiA prenyltransferase family X993_RS11785 PF06299 Protein of unknown function (DUF1045) X993_RS11790 PF00392 Bacterial regulatory proteins, gntR family X993_RS11790 PF07702 UTRA domain X993_RS11795 PF06754 Phosphonate metabolism protein PhnG X993_RS11805 PF05861 Bacterial phosphonate metabolism protein (PhnI) X993_RS11810 PF06007 Phosphonate metabolism protein PhnJ X993_RS11815 PF00005 ABC transporter X993_RS11820 PF00005 ABC transporter X993_RS11825 PF07969 Amidohydrolase family X993_RS11830 PF00005 ABC transporter X993_RS11840 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS11845 PF03807 NADP oxidoreductase coenzyme F420-dependent X993_RS11845 PF14748 Pyrroline-5-carboxylate reductase dimerisation X993_RS11850 PF01168 Alanine racemase, N-terminal domain X993_RS11855 PF13183 4Fe-4S dicluster domain X993_RS11855 PF02754 Cysteine-rich domain X993_RS11860 PF01565 FAD binding domain X993_RS11865 PF01565 FAD binding domain X993_RS11865 PF02913 FAD linked oxidases, C-terminal domain X993_RS11870 PF01565 FAD binding domain X993_RS11870 PF02913 FAD linked oxidases, C-terminal domain X993_RS11875 PF01923 Cobalamin adenosyltransferase X993_RS11880 PF00970 Oxidoreductase FAD-binding domain X993_RS11880 PF00042 Globin X993_RS11880 PF00175 Oxidoreductase NAD-binding domain X993_RS11885 PF00793 DAHP synthetase I family X993_RS11890 PF01523 Putative modulator of DNA gyrase X993_RS11895 PF00795 Carbon-nitrogen hydrolase X993_RS11900 PF13502 AsmA-like C-terminal region X993_RS11900 PF13116 Protein of unknown function X993_RS11905 PF03710 Glutamate-ammonia ligase adenylyltransferase X993_RS11905 PF08335 GlnD PII-uridylyltransferase X993_RS11910 PF02463 RecF/RecN/SMC N terminal domain X993_RS11915 PF01513 ATP-NAD kinase X993_RS11920 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding X993_RS11920 PF01628 HrcA protein C terminal domain X993_RS11925 PF00762 Ferrochelatase X993_RS11930 PF01479 S4 domain X993_RS11935 PF01025 GrpE X993_RS11945 PF00012 Hsp70 protein X993_RS11950 PF00226 DnaJ domain X993_RS11950 PF01556 DnaJ C terminal domain X993_RS11950 PF00684 DnaJ central domain X993_RS11955 PF04715 Anthranilate synthase component I, N terminal region X993_RS11955 PF00425 chorismate binding enzyme X993_RS11960 PF02548 Ketopantoate hydroxymethyltransferase X993_RS11965 PF01712 Deoxynucleoside kinase X993_RS11970 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) X993_RS11975 PF12627 Probable RNA and SrmB- binding site of polymerase A X993_RS11975 PF12626 Polymerase A arginine-rich C-terminus X993_RS11975 PF01743 Poly A polymerase head domain X993_RS11985 PF00308 Bacterial dnaA protein X993_RS11990 PF00586 AIR synthase related protein, N-terminal domain X993_RS11990 PF02769 AIR synthase related protein, C-terminal domain X993_RS11995 PF01610 Transposase X993_RS11995 PF13542 Helix-turn-helix domain of transposase family ISL3 X993_RS11995 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 X993_RS12010 PF08676 MutL C terminal dimerisation domain X993_RS12010 PF01119 DNA mismatch repair protein, C-terminal domain X993_RS12015 PF09335 SNARE associated Golgi protein X993_RS12025 PF05552 Conserved TM helix X993_RS12025 PF00924 Mechanosensitive ion channel X993_RS12035 PF00483 Nucleotidyl transferase X993_RS12035 PF01050 Mannose-6-phosphate isomerase X993_RS12040 PF05159 Capsule polysaccharide biosynthesis protein X993_RS12050 PF02563 Polysaccharide biosynthesis/export protein X993_RS12060 PF01061 ABC-2 type transporter X993_RS12065 PF00005 ABC transporter X993_RS12100 PF16363 GDP-mannose 4,6 dehydratase X993_RS12105 PF08544 GHMP kinases C terminal X993_RS12105 PF00288 GHMP kinases N terminal domain X993_RS12110 PF13580 SIS domain X993_RS12115 PF00483 Nucleotidyl transferase X993_RS12125 PF05159 Capsule polysaccharide biosynthesis protein X993_RS12135 PF00884 Sulfatase X993_RS12140 PF00698 Acyl transferase domain X993_RS12140 PF14765 Polyketide synthase dehydratase X993_RS12140 PF00550 Phosphopantetheine attachment site X993_RS12140 PF08240 Alcohol dehydrogenase GroES-like domain X993_RS12140 PF16197 Ketoacyl-synthetase C-terminal extension X993_RS12140 PF08659 KR domain X993_RS12140 PF02801 Beta-ketoacyl synthase, C-terminal domain X993_RS12140 PF00109 Beta-ketoacyl synthase, N-terminal domain X993_RS12145 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase X993_RS12150 PF00155 Aminotransferase class I and II X993_RS12175 PF12833 Helix-turn-helix domain X993_RS12175 PF02311 AraC-like ligand binding domain X993_RS12180 PF02397 Bacterial sugar transferase X993_RS12185 PF02563 Polysaccharide biosynthesis/export protein X993_RS12185 PF10531 SLBB domain X993_RS12190 PF01451 Low molecular weight phosphotyrosine protein phosphatase X993_RS12195 PF13807 G-rich domain on putative tyrosine kinase X993_RS12195 PF13614 AAA domain X993_RS12195 PF02706 Chain length determinant protein X993_RS12205 PF05159 Capsule polysaccharide biosynthesis protein X993_RS12210 PF00132 Bacterial transferase hexapeptide (six repeats) X993_RS12220 PF13439 Glycosyltransferase Family 4 X993_RS12220 PF00534 Glycosyl transferases group 1 X993_RS12225 PF00793 DAHP synthetase I family X993_RS12235 PF01380 SIS domain X993_RS12235 PF00571 CBS domain X993_RS12240 PF00483 Nucleotidyl transferase X993_RS12260 PF00691 OmpA family X993_RS12265 PF07676 WD40-like Beta Propeller Repeat X993_RS12265 PF04052 TolB amino-terminal domain X993_RS12275 PF02472 Biopolymer transport protein ExbD/TolR X993_RS12280 PF01618 MotA/TolQ/ExbB proton channel family X993_RS12285 PF03061 Thioesterase superfamily X993_RS12290 PF00106 short chain dehydrogenase X993_RS12295 PF00464 Serine hydroxymethyltransferase X993_RS12300 PF03477 ATP cone domain X993_RS12345 PF10417 C-terminal domain of 1-Cys peroxiredoxin X993_RS12345 PF00578 AhpC/TSA family X993_RS12355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS12355 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS12355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X993_RS12380 PF01494 FAD binding domain X993_RS12390 PF07690 Major Facilitator Superfamily X993_RS12395 PF04209 homogentisate 1,2-dioxygenase X993_RS12410 PF07690 Major Facilitator Superfamily X993_RS12415 PF00881 Nitroreductase family X993_RS12420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain X993_RS12420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain X993_RS12425 PF03466 LysR substrate binding domain X993_RS12425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS12430 PF00266 Aminotransferase class-V X993_RS12440 PF00892 EamA-like transporter family X993_RS12445 PF07690 Major Facilitator Superfamily X993_RS12450 PF01799 [2Fe-2S] binding domain X993_RS12450 PF00111 2Fe-2S iron-sulfur cluster binding domain X993_RS12455 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase X993_RS12455 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain X993_RS12475 PF07715 TonB-dependent Receptor Plug Domain X993_RS12475 PF00593 TonB dependent receptor X993_RS12480 PF00005 ABC transporter X993_RS12490 PF01032 FecCD transport family X993_RS12495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS12495 PF03466 LysR substrate binding domain X993_RS12520 PF10605 3HB-oligomer hydrolase (3HBOH) X993_RS12530 PF01925 Sulfite exporter TauE/SafE X993_RS12535 PF07690 Major Facilitator Superfamily X993_RS12540 PF03009 Glycerophosphoryl diester phosphodiesterase family X993_RS12550 PF01810 LysE type translocator X993_RS12605 PF08240 Alcohol dehydrogenase GroES-like domain X993_RS12605 PF00107 Zinc-binding dehydrogenase X993_RS12610 PF01638 HxlR-like helix-turn-helix X993_RS12620 PF00166 Chaperonin 10 Kd subunit X993_RS12625 PF00118 TCP-1/cpn60 chaperonin family X993_RS12635 PF00301 Rubredoxin X993_RS12645 PF02622 Uncharacterized ACR, COG1678 X993_RS12650 PF03652 Holliday junction resolvase X993_RS12655 PF00156 Phosphoribosyl transferase domain X993_RS12660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain X993_RS12660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain X993_RS12665 PF01979 Amidohydrolase family X993_RS12675 PF00149 Calcineurin-like phosphoesterase X993_RS12680 PF16363 GDP-mannose 4,6 dehydratase X993_RS12685 PF00483 Nucleotidyl transferase X993_RS12690 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase X993_RS12695 PF04321 RmlD substrate binding domain X993_RS12705 PF00005 ABC transporter X993_RS12715 PF01370 NAD dependent epimerase/dehydratase family X993_RS12730 PF00535 Glycosyl transferase family 2 X993_RS12740 PF01370 NAD dependent epimerase/dehydratase family X993_RS12745 PF00953 Glycosyl transferase family 4 X993_RS12750 PF02719 Polysaccharide biosynthesis protein X993_RS12760 PF16363 GDP-mannose 4,6 dehydratase X993_RS12765 PF13439 Glycosyltransferase Family 4 X993_RS12765 PF00534 Glycosyl transferases group 1 X993_RS12780 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III X993_RS12780 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain X993_RS12780 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I X993_RS12780 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II X993_RS12785 PF01075 Glycosyltransferase family 9 (heptosyltransferase) X993_RS12795 PF00534 Glycosyl transferases group 1 X993_RS12795 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) X993_RS12800 PF02492 CobW/HypB/UreG, nucleotide-binding domain X993_RS12805 PF01730 UreF X993_RS12810 PF02814 UreE urease accessory protein, N-terminal domain X993_RS12810 PF05194 UreE urease accessory protein, C-terminal domain X993_RS12815 PF01979 Amidohydrolase family X993_RS12815 PF00449 Urease alpha-subunit, N-terminal domain X993_RS12820 PF00699 Urease beta subunit X993_RS12825 PF00547 Urease, gamma subunit X993_RS12830 PF01774 UreD urease accessory protein X993_RS12835 PF00005 ABC transporter X993_RS12840 PF00005 ABC transporter X993_RS12845 PF02653 Branched-chain amino acid transport system / permease component X993_RS12850 PF02653 Branched-chain amino acid transport system / permease component X993_RS12860 PF00202 Aminotransferase class-III X993_RS12865 PF00581 Rhodanese-like domain X993_RS12880 PF04055 Radical SAM superfamily X993_RS12880 PF06969 HemN C-terminal domain X993_RS12885 PF03692 Putative zinc- or iron-chelating domain X993_RS12895 PF02673 Bacitracin resistance protein BacA X993_RS12900 PF02390 Putative methyltransferase X993_RS12920 PF02371 Transposase IS116/IS110/IS902 family X993_RS12920 PF01548 Transposase X993_RS12925 PF01527 Transposase X993_RS12930 PF13683 Integrase core domain X993_RS12930 PF13276 HTH-like domain X993_RS12945 PF02146 Sir2 family X993_RS12950 PF08241 Methyltransferase domain X993_RS12955 PF09286 Pro-kumamolisin, activation domain X993_RS12955 PF00082 Subtilase family X993_RS12960 PF02537 CrcB-like protein, Camphor Resistance (CrcB) X993_RS12970 PF02325 YGGT family X993_RS12985 PF00291 Pyridoxal-phosphate dependent enzyme X993_RS12995 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase X993_RS13000 PF01464 Transglycosylase SLT domain X993_RS13005 PF00155 Aminotransferase class I and II X993_RS13010 PF01029 NusB family X993_RS13015 PF00885 6,7-dimethyl-8-ribityllumazine synthase X993_RS13020 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase X993_RS13020 PF00925 GTP cyclohydrolase II X993_RS13025 PF00677 Lumazine binding domain X993_RS13030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region X993_RS13030 PF01872 RibD C-terminal domain X993_RS13035 PF00202 Aminotransferase class-III X993_RS13050 PF07690 Major Facilitator Superfamily X993_RS13060 PF00291 Pyridoxal-phosphate dependent enzyme X993_RS13065 PF00005 ABC transporter X993_RS13070 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS13075 PF00497 Bacterial extracellular solute-binding proteins, family 3 X993_RS13080 PF01418 Helix-turn-helix domain, rpiR family X993_RS13080 PF01380 SIS domain X993_RS13080 PF02685 Glucokinase X993_RS13085 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase X993_RS13090 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain X993_RS13090 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain X993_RS13095 PF01547 Bacterial extracellular solute-binding protein X993_RS13100 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS13105 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS13110 PF17912 MalK OB fold domain X993_RS13110 PF00005 ABC transporter X993_RS13115 PF03458 UPF0126 domain X993_RS13120 PF01713 Smr domain X993_RS13120 PF00488 MutS domain V X993_RS13125 PF07992 Pyridine nucleotide-disulphide oxidoreductase X993_RS13130 PF13491 4TM region of DNA translocase FtsK/SpoIIIE X993_RS13130 PF17854 FtsK alpha domain X993_RS13130 PF09397 Ftsk gamma domain X993_RS13130 PF01580 FtsK/SpoIIIE family X993_RS13135 PF03548 Outer membrane lipoprotein carrier protein LolA X993_RS13145 PF12002 MgsA AAA+ ATPase C terminal X993_RS13145 PF00004 ATPase family associated with various cellular activities (AAA) X993_RS13145 PF16193 AAA C-terminal domain X993_RS13155 PF02403 Seryl-tRNA synthetase N-terminal domain X993_RS13155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) X993_RS13175 PF05209 Septum formation inhibitor MinC, N-terminal domain X993_RS13175 PF03775 Septum formation inhibitor MinC, C-terminal domain X993_RS13180 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain X993_RS13185 PF03776 Septum formation topological specificity factor MinE X993_RS13200 PF00654 Voltage gated chloride channel X993_RS13205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) X993_RS13215 PF07690 Major Facilitator Superfamily X993_RS13215 PF00083 Sugar (and other) transporter X993_RS13245 PF06969 HemN C-terminal domain X993_RS13245 PF04055 Radical SAM superfamily X993_RS13250 PF01725 Ham1 family X993_RS13255 PF03725 3' exoribonuclease family, domain 2 X993_RS13255 PF01138 3' exoribonuclease family, domain 1 X993_RS13260 PF03755 YicC-like family, N-terminal region X993_RS13260 PF08340 Domain of unknown function (DUF1732) X993_RS13265 PF00625 Guanylate kinase X993_RS13270 PF01192 RNA polymerase Rpb6 X993_RS13275 PF13291 ACT domain X993_RS13275 PF04607 Region found in RelA / SpoT proteins X993_RS13275 PF02824 TGS domain X993_RS13290 PF03449 Transcription elongation factor, N-terminal X993_RS13290 PF01272 Transcription elongation factor, GreA/GreB, C-term X993_RS13295 PF13609 Gram-negative porin X993_RS13305 PF00313 'Cold-shock' DNA-binding domain X993_RS13310 PF17657 Bacterial DNA polymerase III alpha subunit finger domain X993_RS13310 PF02811 PHP domain X993_RS13310 PF07733 Bacterial DNA polymerase III alpha NTPase domain X993_RS13310 PF11490 DNA polymerase III polC-type N-terminus II X993_RS13310 PF00929 Exonuclease X993_RS13310 PF14579 Helix-hairpin-helix motif X993_RS13310 PF14480 DNA polymerase III polC-type N-terminus I X993_RS13330 PF00593 TonB dependent receptor X993_RS13330 PF07715 TonB-dependent Receptor Plug Domain X993_RS13370 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain X993_RS13375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS13375 PF03466 LysR substrate binding domain X993_RS13380 PF08267 Cobalamin-independent synthase, N-terminal domain X993_RS13380 PF01717 Cobalamin-independent synthase, Catalytic domain X993_RS13385 PF01433 Peptidase family M1 domain X993_RS13385 PF17432 Domain of unknown function (DUF3458_C) ARM repeats X993_RS13385 PF11940 Domain of unknown function (DUF3458) Ig-like fold X993_RS13395 PF01169 Uncharacterized protein family UPF0016 X993_RS13400 PF01979 Amidohydrolase family X993_RS13405 PF00860 Permease family X993_RS13410 PF00962 Adenosine/AMP deaminase X993_RS13420 PF02600 Disulfide bond formation protein DsbB X993_RS13425 PF01425 Amidase X993_RS13430 PF07722 Peptidase C26 X993_RS13435 PF07690 Major Facilitator Superfamily X993_RS13445 PF01494 FAD binding domain X993_RS13455 PF01568 Molydopterin dinucleotide binding domain X993_RS13455 PF00037 4Fe-4S binding domain X993_RS13455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain X993_RS13455 PF00384 Molybdopterin oxidoreductase X993_RS13455 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region X993_RS13460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region X993_RS13460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit X993_RS13460 PF00037 4Fe-4S binding domain X993_RS13470 PF12728 Helix-turn-helix domain X993_RS13470 PF12727 PBP superfamily domain X993_RS13480 PF00398 Ribosomal RNA adenine dimethylase X993_RS13485 PF13419 Haloacid dehalogenase-like hydrolase X993_RS13495 PF00691 OmpA family X993_RS13500 PF03989 DNA gyrase C-terminal domain, beta-propeller X993_RS13500 PF00521 DNA gyrase/topoisomerase IV, subunit A X993_RS13510 PF00266 Aminotransferase class-V X993_RS13515 PF01842 ACT domain X993_RS13515 PF00800 Prephenate dehydratase X993_RS13515 PF01817 Chorismate mutase type II X993_RS13520 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) X993_RS13525 PF02224 Cytidylate kinase X993_RS13530 PF00575 S1 RNA binding domain X993_RS13535 PF00216 Bacterial DNA-binding protein X993_RS13545 PF18073 Rubredoxin metal binding domain X993_RS13550 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain X993_RS13550 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain X993_RS13550 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain X993_RS13555 PF00294 pfkB family carbohydrate kinase X993_RS13560 PF01370 NAD dependent epimerase/dehydratase family X993_RS13575 PF00291 Pyridoxal-phosphate dependent enzyme X993_RS13580 PF13406 Transglycosylase SLT domain X993_RS13585 PF00850 Histone deacetylase domain X993_RS13590 PF12146 Serine aminopeptidase, S33 X993_RS13595 PF00005 ABC transporter X993_RS13595 PF09383 NIL domain X993_RS13600 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS13605 PF03180 NLPA lipoprotein X993_RS13610 PF01012 Electron transfer flavoprotein domain X993_RS13615 PF00766 Electron transfer flavoprotein FAD-binding domain X993_RS13615 PF01012 Electron transfer flavoprotein domain X993_RS13620 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS13620 PF12806 Acetyl-CoA dehydrogenase C-terminal like X993_RS13620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS13620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X993_RS13625 PF01266 FAD dependent oxidoreductase X993_RS13630 PF01037 Lrp/AsnC ligand binding domain X993_RS13645 PF07995 Glucose / Sorbosone dehydrogenase X993_RS13650 PF00886 Ribosomal protein S16 X993_RS13655 PF05239 PRC-barrel domain X993_RS13655 PF01782 RimM N-terminal domain X993_RS13660 PF01746 tRNA (Guanine-1)-methyltransferase X993_RS13665 PF01245 Ribosomal protein L19 X993_RS13675 PF00293 NUDIX domain X993_RS13680 PF17113 Regulatory signalling modulator protein AmpE X993_RS13680 PF03186 CobD/Cbib protein X993_RS13690 PF03193 RsgA GTPase X993_RS13695 PF01435 Peptidase family M48 X993_RS13700 PF00929 Exonuclease X993_RS13705 PF00994 Probable molybdopterin binding domain X993_RS13710 PF04751 Protein of unknown function (DUF615) X993_RS13715 PF01523 Putative modulator of DNA gyrase X993_RS13720 PF00186 Dihydrofolate reductase X993_RS13725 PF00158 Sigma-54 interaction domain X993_RS13725 PF00072 Response regulator receiver domain X993_RS13725 PF02954 Bacterial regulatory protein, Fis family X993_RS13750 PF02954 Bacterial regulatory protein, Fis family X993_RS13750 PF00072 Response regulator receiver domain X993_RS13750 PF00158 Sigma-54 interaction domain X993_RS13755 PF00303 Thymidylate synthase X993_RS13775 PF03061 Thioesterase superfamily X993_RS13780 PF10415 Fumarase C C-terminus X993_RS13780 PF00206 Lyase X993_RS13785 PF01554 MatE X993_RS13800 PF02371 Transposase IS116/IS110/IS902 family X993_RS13800 PF01548 Transposase X993_RS13815 PF05981 CreA protein X993_RS13830 PF00037 4Fe-4S binding domain X993_RS13830 PF11953 Domain of unknown function (DUF3470) X993_RS13835 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family X993_RS13835 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain X993_RS13850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain X993_RS13850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain X993_RS13855 PF02646 RmuC family X993_RS13870 PF03454 MoeA C-terminal region (domain IV) X993_RS13870 PF00994 Probable molybdopterin binding domain X993_RS13870 PF03453 MoeA N-terminal region (domain I and II) X993_RS13875 PF12804 MobA-like NTP transferase domain X993_RS13880 PF04055 Radical SAM superfamily X993_RS13880 PF06463 Molybdenum Cofactor Synthesis C X993_RS13885 PF12111 Polyribonucleotide phosphorylase C terminal X993_RS13885 PF00575 S1 RNA binding domain X993_RS13885 PF10150 Ribonuclease E/G family X993_RS13890 PF01479 S4 domain X993_RS13890 PF00849 RNA pseudouridylate synthase X993_RS13895 PF13419 Haloacid dehalogenase-like hydrolase X993_RS13905 PF01343 Peptidase family S49 X993_RS13910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases X993_RS13915 PF02545 Maf-like protein X993_RS13920 PF02620 Large ribosomal RNA subunit accumulation protein YceD X993_RS13925 PF01783 Ribosomal L32p protein family X993_RS13930 PF02504 Fatty acid synthesis protein X993_RS13935 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal X993_RS13935 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III X993_RS13940 PF00698 Acyl transferase domain X993_RS13950 PF00550 Phosphopantetheine attachment site X993_RS13955 PF00109 Beta-ketoacyl synthase, N-terminal domain X993_RS13955 PF02801 Beta-ketoacyl synthase, C-terminal domain X993_RS13965 PF08281 Sigma-70, region 4 X993_RS13965 PF04542 Sigma-70 region 2 X993_RS13975 PF03888 MucB/RseB N-terminal domain X993_RS13975 PF17188 MucB/RseB C-terminal domain X993_RS13980 PF13180 PDZ domain X993_RS13990 PF00679 Elongation factor G C-terminus X993_RS13990 PF00009 Elongation factor Tu GTP binding domain X993_RS13990 PF03144 Elongation factor Tu domain 2 X993_RS13990 PF06421 GTP-binding protein LepA C-terminus X993_RS13995 PF10502 Signal peptidase, peptidase S26 X993_RS14000 PF00035 Double-stranded RNA binding motif X993_RS14000 PF14622 Ribonuclease-III-like X993_RS14005 PF07650 KH domain X993_RS14005 PF01926 50S ribosome-binding GTPase X993_RS14010 PF02565 Recombination protein O C terminal X993_RS14010 PF11967 Recombination protein O N terminal X993_RS14015 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ X993_RS14020 PF01648 4'-phosphopantetheinyl transferase superfamily X993_RS14025 PF00933 Glycosyl hydrolase family 3 N terminal domain X993_RS14030 PF00158 Sigma-54 interaction domain X993_RS14030 PF02954 Bacterial regulatory protein, Fis family X993_RS14030 PF00072 Response regulator receiver domain X993_RS14035 PF09285 Elongation factor P, C-terminal X993_RS14035 PF08207 Elongation factor P (EF-P) KOW-like domain X993_RS14035 PF01132 Elongation factor P (EF-P) OB domain X993_RS14045 PF08459 UvrC Helix-hairpin-helix N-terminal X993_RS14045 PF01541 GIY-YIG catalytic domain X993_RS14045 PF02151 UvrB/uvrC motif X993_RS14050 PF01066 CDP-alcohol phosphatidyltransferase X993_RS14075 PF13185 GAF domain X993_RS14080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS14080 PF03466 LysR substrate binding domain X993_RS14085 PF05726 Pirin C-terminal cupin domain X993_RS14085 PF02678 Pirin X993_RS14090 PF13673 Acetyltransferase (GNAT) domain X993_RS14105 PF02630 SCO1/SenC X993_RS14115 PF02358 Trehalose-phosphatase X993_RS14120 PF00982 Glycosyltransferase family 20 X993_RS14125 PF00664 ABC transporter transmembrane region X993_RS14125 PF00005 ABC transporter X993_RS14130 PF00534 Glycosyl transferases group 1 X993_RS14130 PF13439 Glycosyltransferase Family 4 X993_RS14145 PF01266 FAD dependent oxidoreductase X993_RS14150 PF13458 Periplasmic binding protein X993_RS14155 PF04185 Phosphoesterase family X993_RS14155 PF05506 Domain of unknown function (DUF756) X993_RS14160 PF08543 Phosphomethylpyrimidine kinase X993_RS14165 PF00561 alpha/beta hydrolase fold X993_RS14170 PF00296 Luciferase-like monooxygenase X993_RS14185 PF04794 YdjC-like protein X993_RS14200 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS14205 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS14210 PF00005 ABC transporter X993_RS14215 PF12833 Helix-turn-helix domain X993_RS14225 PF00665 Integrase core domain X993_RS14225 PF13333 Integrase core domain X993_RS14225 PF13276 HTH-like domain X993_RS14230 PF00202 Aminotransferase class-III X993_RS14235 PF04958 Arginine N-succinyltransferase beta subunit X993_RS14240 PF04958 Arginine N-succinyltransferase beta subunit X993_RS14245 PF00171 Aldehyde dehydrogenase family X993_RS14250 PF04996 Succinylarginine dihydrolase X993_RS14255 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family X993_RS14265 PF00497 Bacterial extracellular solute-binding proteins, family 3 X993_RS14275 PF03626 Prokaryotic Cytochrome C oxidase subunit IV X993_RS14280 PF00510 Cytochrome c oxidase subunit III X993_RS14285 PF00115 Cytochrome C and Quinol oxidase polypeptide I X993_RS14290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain X993_RS14290 PF06481 COX Aromatic Rich Motif X993_RS14305 PF02082 Transcriptional regulator X993_RS14315 PF01883 Iron-sulfur cluster assembly protein X993_RS14320 PF01592 NifU-like N terminal domain X993_RS14325 PF00266 Aminotransferase class-V X993_RS14335 PF00005 ABC transporter X993_RS14340 PF01458 Uncharacterized protein family (UPF0051) X993_RS14350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS14350 PF00672 HAMP domain X993_RS14350 PF02203 Tar ligand binding domain homologue X993_RS14355 PF04055 Radical SAM superfamily X993_RS14355 PF06969 HemN C-terminal domain X993_RS14360 PF00520 Ion transport protein X993_RS14360 PF00027 Cyclic nucleotide-binding domain X993_RS14375 PF01136 Peptidase family U32 X993_RS14380 PF01136 Peptidase family U32 X993_RS14385 PF02036 SCP-2 sterol transfer family X993_RS14390 PF08859 DGC domain X993_RS14420 PF01883 Iron-sulfur cluster assembly protein X993_RS14425 PF00115 Cytochrome C and Quinol oxidase polypeptide I X993_RS14430 PF00487 Fatty acid desaturase X993_RS14435 PF03441 FAD binding domain of DNA photolyase X993_RS14435 PF00875 DNA photolyase X993_RS14445 PF03472 Autoinducer binding domain X993_RS14445 PF00196 Bacterial regulatory proteins, luxR family X993_RS14465 PF00221 Aromatic amino acid lyase X993_RS14470 PF07702 UTRA domain X993_RS14470 PF00392 Bacterial regulatory proteins, gntR family X993_RS14475 PF17392 Urocanase C-terminal domain X993_RS14475 PF17391 Urocanase N-terminal domain X993_RS14475 PF01175 Urocanase Rossmann-like domain X993_RS14485 PF01979 Amidohydrolase family X993_RS14490 PF01979 Amidohydrolase family X993_RS14510 PF07722 Peptidase C26 X993_RS14515 PF00120 Glutamine synthetase, catalytic domain X993_RS14520 PF00202 Aminotransferase class-III X993_RS14530 PF05016 ParE toxin of type II toxin-antitoxin system, parDE X993_RS14540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS14540 PF03466 LysR substrate binding domain X993_RS14545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS14545 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS14545 PF18158 Adaptive response protein AidB N-terminal domain X993_RS14550 PF02515 CoA-transferase family III X993_RS14555 PF07690 Major Facilitator Superfamily X993_RS14555 PF00083 Sugar (and other) transporter X993_RS14560 PF04362 Bacterial Fe(2+) trafficking X993_RS14565 PF00696 Amino acid kinase family X993_RS14565 PF00583 Acetyltransferase (GNAT) family X993_RS14570 PF11898 Domain of unknown function (DUF3418) X993_RS14570 PF04408 Helicase associated domain (HA2) X993_RS14570 PF00271 Helicase conserved C-terminal domain X993_RS14570 PF00270 DEAD/DEAH box helicase X993_RS14570 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold X993_RS14590 PF00994 Probable molybdopterin binding domain X993_RS14590 PF18146 Damage-inducible protein CinA KH domain X993_RS14590 PF02464 Competence-damaged protein X993_RS14600 PF00120 Glutamine synthetase, catalytic domain X993_RS14600 PF03951 Glutamine synthetase, beta-Grasp domain X993_RS14605 PF00512 His Kinase A (phospho-acceptor) domain X993_RS14605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS14605 PF00989 PAS fold X993_RS14610 PF02954 Bacterial regulatory protein, Fis family X993_RS14610 PF00158 Sigma-54 interaction domain X993_RS14610 PF00072 Response regulator receiver domain X993_RS14620 PF00196 Bacterial regulatory proteins, luxR family X993_RS14620 PF00072 Response regulator receiver domain X993_RS14625 PF07730 Histidine kinase X993_RS14630 PF02665 Nitrate reductase gamma subunit X993_RS14635 PF02613 Nitrate reductase delta subunit X993_RS14640 PF13247 4Fe-4S dicluster domain X993_RS14640 PF14711 Respiratory nitrate reductase beta C-terminal X993_RS14645 PF14710 Respiratory nitrate reductase alpha N-terminal X993_RS14645 PF00384 Molybdopterin oxidoreductase X993_RS14645 PF01568 Molydopterin dinucleotide binding domain X993_RS14650 PF07690 Major Facilitator Superfamily X993_RS14655 PF07690 Major Facilitator Superfamily X993_RS14665 PF00817 impB/mucB/samB family X993_RS14665 PF11799 impB/mucB/samB family C-terminal domain X993_RS14670 PF01432 Peptidase family M3 X993_RS14675 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain X993_RS14675 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain X993_RS14680 PF00196 Bacterial regulatory proteins, luxR family X993_RS14680 PF00072 Response regulator receiver domain X993_RS14685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS14685 PF00989 PAS fold X993_RS14685 PF00512 His Kinase A (phospho-acceptor) domain X993_RS14690 PF17831 Pyruvate dehydrogenase E1 component middle domain X993_RS14690 PF00456 Transketolase, thiamine diphosphate binding domain X993_RS14695 PF02817 e3 binding domain X993_RS14695 PF00364 Biotin-requiring enzyme X993_RS14695 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) X993_RS14700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain X993_RS14700 PF07992 Pyridine nucleotide-disulphide oxidoreductase X993_RS14705 PF09361 Phasin protein X993_RS14710 PF00768 D-alanyl-D-alanine carboxypeptidase X993_RS14720 PF09339 IclR helix-turn-helix domain X993_RS14720 PF01614 Bacterial transcriptional regulator X993_RS14725 PF02754 Cysteine-rich domain X993_RS14730 PF11870 Domain of unknown function (DUF3390) X993_RS14730 PF02589 LUD domain X993_RS14730 PF13183 4Fe-4S dicluster domain X993_RS14740 PF01451 Low molecular weight phosphotyrosine protein phosphatase X993_RS14745 PF02082 Transcriptional regulator X993_RS14750 PF00266 Aminotransferase class-V X993_RS14755 PF01592 NifU-like N terminal domain X993_RS14760 PF01521 Iron-sulphur cluster biosynthesis X993_RS14765 PF07743 HSCB C-terminal oligomerisation domain X993_RS14770 PF00012 Hsp70 protein X993_RS14775 PF00111 2Fe-2S iron-sulfur cluster binding domain X993_RS14780 PF04384 Iron-sulphur cluster assembly X993_RS14790 PF01336 OB-fold nucleic acid binding domain X993_RS14790 PF00152 tRNA synthetases class II (D, K and N) X993_RS14795 PF00472 RF-1 domain X993_RS14795 PF03462 PCRF domain X993_RS14800 PF17768 RecJ OB domain X993_RS14800 PF01368 DHH family X993_RS14800 PF02272 DHHA1 domain X993_RS14810 PF02687 FtsX-like permease family X993_RS14810 PF12704 MacB-like periplasmic core domain X993_RS14815 PF00005 ABC transporter X993_RS14820 PF01026 TatD related DNase X993_RS14825 PF03772 Competence protein X993_RS14825 PF00753 Metallo-beta-lactamase superfamily X993_RS14830 PF08386 TAP-like protein X993_RS14830 PF00561 alpha/beta hydrolase fold X993_RS14835 PF00117 Glutamine amidotransferase class-I X993_RS14835 PF06418 CTP synthase N-terminus X993_RS14840 PF00793 DAHP synthetase I family X993_RS14845 PF00113 Enolase, C-terminal TIM barrel domain X993_RS14845 PF03952 Enolase, N-terminal domain X993_RS14850 PF04977 Septum formation initiator X993_RS14860 PF01430 Hsp33 protein X993_RS14865 PF00132 Bacterial transferase hexapeptide (six repeats) X993_RS14870 PF04305 Protein of unknown function (DUF455) X993_RS14875 PF00561 alpha/beta hydrolase fold X993_RS14880 PF02811 PHP domain X993_RS14885 PF01300 Telomere recombination X993_RS14890 PF02163 Peptidase family M50 X993_RS14895 PF00579 tRNA synthetases class I (W and Y) X993_RS14905 PF00701 Dihydrodipicolinate synthetase family X993_RS14910 PF06804 NlpB/DapX lipoprotein X993_RS14915 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain X993_RS14915 PF10996 Beta-Casp domain X993_RS14915 PF00753 Metallo-beta-lactamase superfamily X993_RS14920 PF08007 Cupin superfamily protein X993_RS14925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase X993_RS14935 PF05192 MutS domain III X993_RS14935 PF05188 MutS domain II X993_RS14935 PF01624 MutS domain I X993_RS14935 PF05190 MutS family domain IV X993_RS14935 PF00488 MutS domain V X993_RS14950 PF00459 Inositol monophosphatase family X993_RS14955 PF00588 SpoU rRNA Methylase family X993_RS14960 PF00132 Bacterial transferase hexapeptide (six repeats) X993_RS14965 PF00149 Calcineurin-like phosphoesterase X993_RS14970 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD X993_RS14975 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD X993_RS14985 PF01406 tRNA synthetases class I (C) catalytic domain X993_RS14985 PF09190 DALR domain X993_RS14995 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit X993_RS15000 PF11734 TilS substrate C-terminal domain X993_RS15000 PF01171 PP-loop family X993_RS15000 PF09179 TilS substrate binding domain X993_RS15005 PF01842 ACT domain X993_RS15005 PF13840 ACT domain X993_RS15005 PF00696 Amino acid kinase family X993_RS15035 PF00873 AcrB/AcrD/AcrF family X993_RS15040 PF13533 Biotin-lipoyl like X993_RS15045 PF00009 Elongation factor Tu GTP binding domain X993_RS15050 PF13193 AMP-binding enzyme C-terminal domain X993_RS15050 PF00501 AMP-binding enzyme X993_RS15050 PF00550 Phosphopantetheine attachment site X993_RS15050 PF00668 Condensation domain X993_RS15050 PF00975 Thioesterase domain X993_RS15065 PF00668 Condensation domain X993_RS15065 PF13193 AMP-binding enzyme C-terminal domain X993_RS15065 PF00501 AMP-binding enzyme X993_RS15065 PF00550 Phosphopantetheine attachment site X993_RS15075 PF02668 Taurine catabolism dioxygenase TauD, TfdA family X993_RS15095 PF02780 Transketolase, C-terminal domain X993_RS15095 PF02779 Transketolase, pyrimidine binding domain X993_RS15095 PF00456 Transketolase, thiamine diphosphate binding domain X993_RS15100 PF02779 Transketolase, pyrimidine binding domain X993_RS15100 PF02780 Transketolase, C-terminal domain X993_RS15110 PF01757 Acyltransferase family X993_RS15115 PF00266 Aminotransferase class-V X993_RS15125 PF01507 Phosphoadenosine phosphosulfate reductase family X993_RS15130 PF00009 Elongation factor Tu GTP binding domain X993_RS15135 PF00291 Pyridoxal-phosphate dependent enzyme X993_RS15140 PF00206 Lyase X993_RS15140 PF02655 ATP-grasp domain X993_RS15150 PF00557 Metallopeptidase family M24 X993_RS15160 PF00037 4Fe-4S binding domain X993_RS15160 PF11953 Domain of unknown function (DUF3470) X993_RS15165 PF06463 Molybdenum Cofactor Synthesis C X993_RS15165 PF04055 Radical SAM superfamily X993_RS15170 PF00175 Oxidoreductase NAD-binding domain X993_RS15170 PF00970 Oxidoreductase FAD-binding domain X993_RS15175 PF01568 Molydopterin dinucleotide binding domain X993_RS15175 PF00384 Molybdopterin oxidoreductase X993_RS15175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain X993_RS15195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle X993_RS15200 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS15205 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS15205 PF12911 N-terminal TM domain of oligopeptide transport permease C X993_RS15210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region X993_RS15210 PF00005 ABC transporter X993_RS15215 PF00877 NlpC/P60 family X993_RS15220 PF01734 Patatin-like phospholipase X993_RS15225 PF00749 tRNA synthetases class I (E and Q), catalytic domain X993_RS15265 PF12833 Helix-turn-helix domain X993_RS15265 PF02311 AraC-like ligand binding domain X993_RS15270 PF03737 Aldolase/RraA X993_RS15280 PF01274 Malate synthase X993_RS15285 PF13419 Haloacid dehalogenase-like hydrolase X993_RS15290 PF03466 LysR substrate binding domain X993_RS15290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS15295 PF00582 Universal stress protein family X993_RS15300 PF00463 Isocitrate lyase family X993_RS15305 PF00271 Helicase conserved C-terminal domain X993_RS15305 PF00270 DEAD/DEAH box helicase X993_RS15315 PF00814 Glycoprotease family X993_RS15325 PF03167 Uracil DNA glycosylase superfamily X993_RS15340 PF08543 Phosphomethylpyrimidine kinase X993_RS15345 PF07690 Major Facilitator Superfamily X993_RS15350 PF00842 Alanine racemase, C-terminal domain X993_RS15350 PF01168 Alanine racemase, N-terminal domain X993_RS15355 PF18073 Rubredoxin metal binding domain X993_RS15365 PF00005 ABC transporter X993_RS15365 PF12848 ABC transporter X993_RS15370 PF00255 Glutathione peroxidase X993_RS15375 PF13091 PLD-like domain X993_RS15385 PF05175 Methyltransferase small domain X993_RS15390 PF01546 Peptidase family M20/M25/M40 X993_RS15390 PF07687 Peptidase dimerisation domain X993_RS15395 PF03960 ArsC family X993_RS15400 PF14602 Hexapeptide repeat of succinyl-transferase X993_RS15400 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal X993_RS15400 PF00132 Bacterial transferase hexapeptide (six repeats) X993_RS15405 PF00155 Aminotransferase class I and II X993_RS15415 PF02463 RecF/RecN/SMC N terminal domain X993_RS15415 PF06470 SMC proteins Flexible Hinge Domain X993_RS15430 PF00533 BRCA1 C Terminus (BRCT) domain X993_RS15430 PF01653 NAD-dependent DNA ligase adenylation domain X993_RS15430 PF03120 NAD-dependent DNA ligase OB-fold domain X993_RS15430 PF12826 Helix-hairpin-helix motif X993_RS15430 PF03119 NAD-dependent DNA ligase C4 zinc finger domain X993_RS15435 PF01327 Polypeptide deformylase X993_RS15440 PF01479 S4 domain X993_RS15440 PF00849 RNA pseudouridylate synthase X993_RS15445 PF01966 HD domain X993_RS15445 PF01909 Nucleotidyltransferase domain X993_RS15445 PF08335 GlnD PII-uridylyltransferase X993_RS15450 PF00557 Metallopeptidase family M24 X993_RS15460 PF00318 Ribosomal protein S2 X993_RS15465 PF00889 Elongation factor TS X993_RS15470 PF00696 Amino acid kinase family X993_RS15475 PF01765 Ribosome recycling factor X993_RS15480 PF01255 Putative undecaprenyl diphosphate synthase X993_RS15490 PF13288 DXP reductoisomerase C-terminal domain X993_RS15490 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain X993_RS15490 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase X993_RS15495 PF17820 PDZ domain X993_RS15495 PF02163 Peptidase family M50 X993_RS15500 PF07244 Surface antigen variable number repeat X993_RS15500 PF01103 Surface antigen X993_RS15510 PF00132 Bacterial transferase hexapeptide (six repeats) X993_RS15510 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD X993_RS15515 PF07977 FabA-like domain X993_RS15520 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 X993_RS15520 PF00132 Bacterial transferase hexapeptide (six repeats) X993_RS15525 PF02684 Lipid-A-disaccharide synthetase X993_RS15530 PF01351 Ribonuclease HII X993_RS15535 PF00588 SpoU rRNA Methylase family X993_RS15535 PF08032 RNA 2'-O ribose methyltransferase substrate binding X993_RS15540 PF03618 Kinase/pyrophosphorylase X993_RS15545 PF00082 Subtilase family X993_RS15545 PF09286 Pro-kumamolisin, activation domain X993_RS15555 PF00391 PEP-utilising enzyme, mobile domain X993_RS15555 PF02896 PEP-utilising enzyme, TIM barrel domain X993_RS15555 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain X993_RS15565 PF01145 SPFH domain / Band 7 family X993_RS15565 PF16200 C-terminal region of band_7 X993_RS15570 PF01668 SmpB protein X993_RS15575 PF03364 Polyketide cyclase / dehydrase and lipid transport X993_RS15580 PF03658 RnfH family Ubiquitin X993_RS15585 PF00892 EamA-like transporter family X993_RS15605 PF00571 CBS domain X993_RS15605 PF00478 IMP dehydrogenase / GMP reductase domain X993_RS15615 PF00117 Glutamine amidotransferase class-I X993_RS15615 PF00958 GMP synthase C terminal domain X993_RS15615 PF02540 NAD synthase X993_RS15620 PF07690 Major Facilitator Superfamily X993_RS15630 PF09350 Domain of unknown function (DUF1992) X993_RS15635 PF14437 MafB19-like deaminase X993_RS15640 PF02016 LD-carboxypeptidase N-terminal domain X993_RS15640 PF17676 LD-carboxypeptidase C-terminal domain X993_RS15645 PF00392 Bacterial regulatory proteins, gntR family X993_RS15645 PF07729 FCD domain X993_RS15650 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin X993_RS15655 PF01177 Asp/Glu/Hydantoin racemase X993_RS15665 PF01014 Uricase X993_RS15665 PF09349 OHCU decarboxylase X993_RS15670 PF03561 Allantoicase repeat X993_RS15675 PF04115 Ureidoglycolate lyase X993_RS15685 PF00576 HIUase/Transthyretin family X993_RS15690 PF01979 Amidohydrolase family X993_RS15695 PF03466 LysR substrate binding domain X993_RS15695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS15700 PF07311 Dodecin X993_RS15705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase X993_RS15705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase X993_RS15715 PF01741 Large-conductance mechanosensitive channel, MscL X993_RS15730 PF00912 Transglycosylase X993_RS15730 PF17092 Penicillin-binding protein OB-like domain X993_RS15730 PF00905 Penicillin binding protein transpeptidase domain X993_RS15745 PF00291 Pyridoxal-phosphate dependent enzyme X993_RS15750 PF07687 Peptidase dimerisation domain X993_RS15750 PF01546 Peptidase family M20/M25/M40 X993_RS15755 PF02559 CarD-like/TRCF domain X993_RS15755 PF00271 Helicase conserved C-terminal domain X993_RS15755 PF00270 DEAD/DEAH box helicase X993_RS15755 PF17757 UvrB interaction domain X993_RS15755 PF03461 TRCF domain X993_RS15760 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase X993_RS15765 PF02542 YgbB family X993_RS15770 PF02627 Carboxymuconolactone decarboxylase family X993_RS15775 PF00578 AhpC/TSA family X993_RS15780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS15780 PF00672 HAMP domain X993_RS15780 PF00512 His Kinase A (phospho-acceptor) domain X993_RS15785 PF00072 Response regulator receiver domain X993_RS15785 PF00486 Transcriptional regulatory protein, C terminal X993_RS15860 PF00850 Histone deacetylase domain X993_RS15870 PF00267 Gram-negative porin X993_RS15880 PF02558 Ketopantoate reductase PanE/ApbA X993_RS15880 PF08546 Ketopantoate reductase PanE/ApbA C terminal X993_RS15885 PF01047 MarR family X993_RS15890 PF02595 Glycerate kinase family X993_RS15895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase X993_RS15895 PF05697 Bacterial trigger factor protein (TF) X993_RS15895 PF05698 Bacterial trigger factor protein (TF) C-terminus X993_RS15900 PF00574 Clp protease X993_RS15905 PF06689 ClpX C4-type zinc finger X993_RS15905 PF10431 C-terminal, D2-small domain, of ClpB protein X993_RS15905 PF07724 AAA domain (Cdc48 subfamily) X993_RS15910 PF02190 ATP-dependent protease La (LON) substrate-binding domain X993_RS15910 PF05362 Lon protease (S16) C-terminal proteolytic domain X993_RS15910 PF00004 ATPase family associated with various cellular activities (AAA) X993_RS15945 PF02371 Transposase IS116/IS110/IS902 family X993_RS15945 PF01548 Transposase X993_RS15965 PF13472 GDSL-like Lipase/Acylhydrolase family X993_RS15970 PF00005 ABC transporter X993_RS15975 PF00342 Phosphoglucose isomerase X993_RS15980 PF01256 Carbohydrate kinase X993_RS15985 PF01266 FAD dependent oxidoreductase X993_RS15995 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain X993_RS15995 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal X993_RS15995 PF02769 AIR synthase related protein, C-terminal domain X993_RS16010 PF01722 BolA-like protein X993_RS16015 PF04279 Intracellular septation protein A X993_RS16020 PF01641 SelR domain X993_RS16025 PF02696 Uncharacterized ACR, YdiU/UPF0061 family X993_RS16030 PF13193 AMP-binding enzyme C-terminal domain X993_RS16030 PF00501 AMP-binding enzyme X993_RS16035 PF00378 Enoyl-CoA hydratase/isomerase X993_RS16035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain X993_RS16035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain X993_RS16040 PF00857 Isochorismatase family X993_RS16045 PF00108 Thiolase, N-terminal domain X993_RS16045 PF02803 Thiolase, C-terminal domain X993_RS16065 PF16884 N-terminal domain of oxidoreductase X993_RS16065 PF00107 Zinc-binding dehydrogenase X993_RS16070 PF07859 alpha/beta hydrolase fold X993_RS16075 PF13673 Acetyltransferase (GNAT) domain X993_RS16085 PF01571 Aminomethyltransferase folate-binding domain X993_RS16090 PF02618 YceG-like family X993_RS16095 PF02223 Thymidylate kinase X993_RS16100 PF09115 DNA polymerase III, delta subunit, C terminal X993_RS16105 PF00583 Acetyltransferase (GNAT) family X993_RS16110 PF01026 TatD related DNase X993_RS16130 PF02463 RecF/RecN/SMC N terminal domain X993_RS16135 PF13439 Glycosyltransferase Family 4 X993_RS16135 PF00534 Glycosyl transferases group 1 X993_RS16155 PF17763 Glutaminase/Asparaginase C-terminal domain X993_RS16155 PF00710 Asparaginase, N-terminal X993_RS16165 PF01476 LysM domain X993_RS16165 PF04972 BON domain X993_RS16170 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase X993_RS16170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase X993_RS16175 PF01261 Xylose isomerase-like TIM barrel X993_RS16180 PF00205 Thiamine pyrophosphate enzyme, central domain X993_RS16180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain X993_RS16180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain X993_RS16185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS16185 PF03466 LysR substrate binding domain X993_RS16200 PF08281 Sigma-70, region 4 X993_RS16200 PF04542 Sigma-70 region 2 X993_RS16210 PF01250 Ribosomal protein S6 X993_RS16220 PF01084 Ribosomal protein S18 X993_RS16225 PF01281 Ribosomal protein L9, N-terminal domain X993_RS16225 PF03948 Ribosomal protein L9, C-terminal domain X993_RS16230 PF00772 DnaB-like helicase N terminal domain X993_RS16230 PF03796 DnaB-like helicase C terminal domain X993_RS16240 PF01384 Phosphate transporter family X993_RS16245 PF00877 NlpC/P60 family X993_RS16250 PF02562 PhoH-like protein X993_RS16250 PF13638 PIN domain X993_RS16255 PF00578 AhpC/TSA family X993_RS16260 PF01522 Polysaccharide deacetylase X993_RS16265 PF02911 Formyl transferase, C-terminal domain X993_RS16265 PF00551 Formyl transferase X993_RS16265 PF01370 NAD dependent epimerase/dehydratase family X993_RS16270 PF02911 Formyl transferase, C-terminal domain X993_RS16270 PF01370 NAD dependent epimerase/dehydratase family X993_RS16270 PF00551 Formyl transferase X993_RS16275 PF00535 Glycosyl transferase family 2 X993_RS16280 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family X993_RS16290 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase X993_RS16300 PF00155 Aminotransferase class I and II X993_RS16305 PF03447 Homoserine dehydrogenase, NAD binding domain X993_RS16305 PF00742 Homoserine dehydrogenase X993_RS16305 PF01842 ACT domain X993_RS16310 PF14821 Threonine synthase N terminus X993_RS16310 PF00291 Pyridoxal-phosphate dependent enzyme X993_RS16315 PF00994 Probable molybdopterin binding domain X993_RS16315 PF03454 MoeA C-terminal region (domain IV) X993_RS16315 PF03453 MoeA N-terminal region (domain I and II) X993_RS16320 PF02597 ThiS family X993_RS16325 PF02391 MoaE protein X993_RS16330 PF01152 Bacterial-like globin X993_RS16335 PF02082 Transcriptional regulator X993_RS16340 PF10431 C-terminal, D2-small domain, of ClpB protein X993_RS16340 PF02861 Clp amino terminal domain, pathogenicity island component X993_RS16340 PF17871 AAA lid domain X993_RS16340 PF00004 ATPase family associated with various cellular activities (AAA) X993_RS16340 PF07724 AAA domain (Cdc48 subfamily) X993_RS16365 PF01554 MatE X993_RS16375 PF01197 Ribosomal protein L31 X993_RS16380 PF06167 Glucose-regulated metallo-peptidase M90 X993_RS16385 PF07690 Major Facilitator Superfamily X993_RS16390 PF13411 MerR HTH family regulatory protein X993_RS16395 PF07498 Rho termination factor, N-terminal domain X993_RS16395 PF07497 Rho termination factor, RNA-binding domain X993_RS16395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain X993_RS16405 PF00085 Thioredoxin X993_RS16410 PF12170 DNA polymerase III tau subunit V interacting with alpha X993_RS16410 PF12169 DNA polymerase III subunits gamma and tau domain III X993_RS16410 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding X993_RS16415 PF02575 YbaB/EbfC DNA-binding family X993_RS16420 PF02132 RecR protein X993_RS16420 PF13662 Toprim domain X993_RS16425 PF02515 CoA-transferase family III X993_RS16430 PF01975 Survival protein SurE X993_RS16440 PF01476 LysM domain X993_RS16440 PF01551 Peptidase family M23 X993_RS16445 PF04545 Sigma-70, region 4 X993_RS16445 PF04542 Sigma-70 region 2 X993_RS16445 PF00140 Sigma-70 factor, region 1.2 X993_RS16445 PF04539 Sigma-70 region 3 X993_RS16465 PF05958 tRNA (Uracil-5-)-methyltransferase X993_RS16470 PF01027 Inhibitor of apoptosis-promoting Bax1 X993_RS16475 PF00334 Nucleoside diphosphate kinase X993_RS16480 PF04055 Radical SAM superfamily X993_RS16490 PF04551 GcpE protein X993_RS16495 PF03129 Anticodon binding domain X993_RS16495 PF13393 Histidyl-tRNA synthetase X993_RS16500 PF09976 Tetratricopeptide repeat-like domain X993_RS16505 PF13360 PQQ-like domain X993_RS16510 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal X993_RS16510 PF01926 50S ribosome-binding GTPase X993_RS16515 PF17209 Hfq protein X993_RS16520 PF16360 GTP-binding GTPase Middle Region X993_RS16520 PF13167 GTP-binding GTPase N-terminal X993_RS16520 PF01926 50S ribosome-binding GTPase X993_RS16525 PF01145 SPFH domain / Band 7 family X993_RS16525 PF12221 Bacterial membrane protein N terminal X993_RS16530 PF01145 SPFH domain / Band 7 family X993_RS16540 PF13393 Histidyl-tRNA synthetase X993_RS16545 PF00709 Adenylosuccinate synthetase X993_RS16550 PF00156 Phosphoribosyl transferase domain X993_RS16555 PF02705 K+ potassium transporter X993_RS16560 PF16921 Tex protein YqgF-like domain X993_RS16560 PF00575 S1 RNA binding domain X993_RS16560 PF17674 HHH domain X993_RS16560 PF09371 Tex-like protein N-terminal domain X993_RS16575 PF04851 Type III restriction enzyme, res subunit X993_RS16575 PF13307 Helicase C-terminal domain X993_RS16580 PF13525 Outer membrane lipoprotein X993_RS16585 PF00849 RNA pseudouridylate synthase X993_RS16585 PF01479 S4 domain X993_RS16590 PF02578 Multi-copper polyphenol oxidoreductase laccase X993_RS16595 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus X993_RS16600 PF02803 Thiolase, C-terminal domain X993_RS16600 PF00108 Thiolase, N-terminal domain X993_RS16605 PF00106 short chain dehydrogenase X993_RS16610 PF07879 PHB/PHA accumulation regulator DNA-binding domain X993_RS16610 PF05233 PHB accumulation regulatory domain X993_RS16615 PF00919 Uncharacterized protein family UPF0004 X993_RS16615 PF18693 TRAM domain X993_RS16615 PF04055 Radical SAM superfamily X993_RS16620 PF00294 pfkB family carbohydrate kinase X993_RS16625 PF02803 Thiolase, C-terminal domain X993_RS16625 PF00108 Thiolase, N-terminal domain X993_RS16635 PF01053 Cys/Met metabolism PLP-dependent enzyme X993_RS16655 PF03649 Uncharacterised protein family (UPF0014) X993_RS16660 PF00005 ABC transporter X993_RS16665 PF05170 AsmA family X993_RS16675 PF00005 ABC transporter X993_RS16675 PF12848 ABC transporter X993_RS16685 PF00171 Aldehyde dehydrogenase family X993_RS16690 PF03060 Nitronate monooxygenase X993_RS16695 PF03922 OmpW family X993_RS16705 PF01566 Natural resistance-associated macrophage protein X993_RS16710 PF13416 Bacterial extracellular solute-binding protein X993_RS16715 PF00005 ABC transporter X993_RS16715 PF08402 TOBE domain X993_RS16720 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS16725 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS16730 PF01925 Sulfite exporter TauE/SafE X993_RS16740 PF00753 Metallo-beta-lactamase superfamily X993_RS16745 PF00158 Sigma-54 interaction domain X993_RS16745 PF00072 Response regulator receiver domain X993_RS16745 PF02954 Bacterial regulatory protein, Fis family X993_RS16755 PF13443 Cro/C1-type HTH DNA-binding domain X993_RS16775 PF02321 Outer membrane efflux protein X993_RS16780 PF00873 AcrB/AcrD/AcrF family X993_RS16785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion X993_RS16790 PF08361 MAATS-type transcriptional repressor, C-terminal region X993_RS16790 PF00440 Bacterial regulatory proteins, tetR family X993_RS16795 PF00654 Voltage gated chloride channel X993_RS16800 PF03601 Conserved hypothetical protein 698 X993_RS16805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS16805 PF03466 LysR substrate binding domain X993_RS16820 PF00294 pfkB family carbohydrate kinase X993_RS16825 PF07690 Major Facilitator Superfamily X993_RS16830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain X993_RS16830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain X993_RS16835 PF00356 Bacterial regulatory proteins, lacI family X993_RS16925 PF01544 CorA-like Mg2+ transporter protein X993_RS16955 PF00924 Mechanosensitive ion channel X993_RS16955 PF12795 Mechanosensitive ion channel porin domain X993_RS16955 PF12794 Mechanosensitive ion channel inner membrane domain 1 X993_RS16960 PF12801 4Fe-4S binding domain X993_RS16960 PF04205 FMN-binding domain X993_RS16985 PF12679 ABC-2 family transporter protein X993_RS16990 PF00005 ABC transporter X993_RS16995 PF05048 Periplasmic copper-binding protein (NosD) X993_RS17000 PF18764 Nitrous oxide reductase propeller repeat X993_RS17000 PF13473 Cupredoxin-like domain X993_RS17000 PF18793 Nitrous oxide reductase propeller repeat 2 X993_RS17005 PF02424 ApbE family X993_RS17010 PF00005 ABC transporter X993_RS17020 PF02203 Tar ligand binding domain homologue X993_RS17020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS17020 PF00672 HAMP domain X993_RS17030 PF02733 Dak1 domain X993_RS17030 PF02734 DAK2 domain X993_RS17040 PF00355 Rieske [2Fe-2S] domain X993_RS17045 PF00355 Rieske [2Fe-2S] domain X993_RS17050 PF00999 Sodium/hydrogen exchanger family X993_RS17055 PF04820 Tryptophan halogenase X993_RS17070 PF00465 Iron-containing alcohol dehydrogenase X993_RS17110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain X993_RS17110 PF02753 Pili assembly chaperone PapD, C-terminal domain X993_RS17115 PF13953 PapC C-terminal domain X993_RS17115 PF13954 PapC N-terminal domain X993_RS17115 PF00577 Outer membrane usher protein X993_RS17145 PF05658 Head domain of trimeric autotransporter adhesin X993_RS17145 PF05662 Coiled stalk of trimeric autotransporter adhesin X993_RS17145 PF03895 YadA-like membrane anchor domain X993_RS17145 PF13018 Extended Signal Peptide of Type V secretion system X993_RS17160 PF00196 Bacterial regulatory proteins, luxR family X993_RS17160 PF00072 Response regulator receiver domain X993_RS17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS17165 PF00512 His Kinase A (phospho-acceptor) domain X993_RS17165 PF09456 RcsC Alpha-Beta-Loop (ABL) X993_RS17165 PF00072 Response regulator receiver domain X993_RS17210 PF00474 Sodium:solute symporter family X993_RS17220 PF13609 Gram-negative porin X993_RS17240 PF01527 Transposase X993_RS17265 PF00392 Bacterial regulatory proteins, gntR family X993_RS17265 PF07729 FCD domain X993_RS17275 PF00561 alpha/beta hydrolase fold X993_RS17280 PF01613 Flavin reductase like domain X993_RS17285 PF00296 Luciferase-like monooxygenase X993_RS17290 PF00171 Aldehyde dehydrogenase family X993_RS17315 PF08402 TOBE domain X993_RS17315 PF00005 ABC transporter X993_RS17325 PF00171 Aldehyde dehydrogenase family X993_RS17330 PF13609 Gram-negative porin X993_RS17340 PF00816 H-NS histone family X993_RS17345 PF01389 OmpA-like transmembrane domain X993_RS17345 PF00691 OmpA family X993_RS17370 PF03412 Peptidase C39 family X993_RS17370 PF00005 ABC transporter X993_RS17370 PF00664 ABC transporter transmembrane region X993_RS17375 PF00529 HlyD membrane-fusion protein of T1SS X993_RS17375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion X993_RS17400 PF00072 Response regulator receiver domain X993_RS17400 PF00486 Transcriptional regulatory protein, C terminal X993_RS17405 PF01548 Transposase X993_RS17405 PF02371 Transposase IS116/IS110/IS902 family X993_RS17410 PF13340 Putative transposase of IS4/5 family (DUF4096) X993_RS17425 PF01527 Transposase X993_RS17430 PF13609 Gram-negative porin X993_RS17440 PF00221 Aromatic amino acid lyase X993_RS17445 PF07690 Major Facilitator Superfamily X993_RS17450 PF17391 Urocanase N-terminal domain X993_RS17450 PF01175 Urocanase Rossmann-like domain X993_RS17450 PF17392 Urocanase C-terminal domain X993_RS17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS17460 PF03466 LysR substrate binding domain X993_RS17465 PF01979 Amidohydrolase family X993_RS17470 PF07687 Peptidase dimerisation domain X993_RS17470 PF01546 Peptidase family M20/M25/M40 X993_RS17475 PF00581 Rhodanese-like domain X993_RS17485 PF04542 Sigma-70 region 2 X993_RS17485 PF08281 Sigma-70, region 4 X993_RS17490 PF06532 Negative regulator of sigma F X993_RS17510 PF05114 Protein of unknown function (DUF692) X993_RS17525 PF01804 Penicillin amidase X993_RS17530 PF02543 Carbamoyltransferase N-terminus X993_RS17530 PF16861 Carbamoyltransferase C-terminus X993_RS17535 PF00668 Condensation domain X993_RS17535 PF13193 AMP-binding enzyme C-terminal domain X993_RS17535 PF00550 Phosphopantetheine attachment site X993_RS17535 PF00975 Thioesterase domain X993_RS17535 PF00501 AMP-binding enzyme X993_RS17545 PF01212 Beta-eliminating lyase X993_RS17550 PF00206 Lyase X993_RS17550 PF02655 ATP-grasp domain X993_RS17555 PF00291 Pyridoxal-phosphate dependent enzyme X993_RS17575 PF14698 Argininosuccinate lyase C-terminal X993_RS17575 PF00206 Lyase X993_RS17580 PF00764 Arginosuccinate synthase X993_RS17585 PF18216 N-formyltransferase dimerization C-terminal domain X993_RS17585 PF00551 Formyl transferase X993_RS17595 PF00155 Aminotransferase class I and II X993_RS17605 PF03621 MbtH-like protein X993_RS17620 PF13609 Gram-negative porin X993_RS17625 PF12833 Helix-turn-helix domain X993_RS17625 PF12852 Cupin X993_RS17630 PF00892 EamA-like transporter family X993_RS17635 PF01584 CheW-like domain X993_RS17640 PF00672 HAMP domain X993_RS17640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS17640 PF02203 Tar ligand binding domain homologue X993_RS17660 PF13193 AMP-binding enzyme C-terminal domain X993_RS17660 PF00501 AMP-binding enzyme X993_RS17665 PF07690 Major Facilitator Superfamily X993_RS17670 PF13649 Methyltransferase domain X993_RS17675 PF04069 Substrate binding domain of ABC-type glycine betaine transport system X993_RS17680 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS17685 PF00005 ABC transporter X993_RS17690 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS17700 PF13520 Amino acid permease X993_RS17710 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain X993_RS17710 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain X993_RS17715 PF00696 Amino acid kinase family X993_RS17720 PF00561 alpha/beta hydrolase fold X993_RS17720 PF00106 short chain dehydrogenase X993_RS17725 PF03928 Haem-degrading X993_RS17730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family X993_RS17730 PF03466 LysR substrate binding domain X993_RS17735 PF02798 Glutathione S-transferase, N-terminal domain X993_RS17735 PF00043 Glutathione S-transferase, C-terminal domain X993_RS17745 PF13458 Periplasmic binding protein X993_RS17750 PF01047 MarR family X993_RS17755 PF07690 Major Facilitator Superfamily X993_RS17760 PF02638 Glycosyl hydrolase-like 10 X993_RS17765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases X993_RS17775 PF02571 Precorrin-6x reductase CbiJ/CobK X993_RS17780 PF01888 CbiD X993_RS17785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases X993_RS17790 PF01077 Nitrite and sulphite reductase 4Fe-4S domain X993_RS17790 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain X993_RS17795 PF02570 Precorrin-8X methylmutase X993_RS17800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases X993_RS17805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases X993_RS17810 PF02839 Carbohydrate binding domain X993_RS17820 PF02230 Phospholipase/Carboxylesterase X993_RS17830 PF07728 AAA domain (dynein-related subfamily) X993_RS17830 PF17863 AAA lid domain X993_RS17830 PF13519 von Willebrand factor type A domain X993_RS17865 PF07685 CobB/CobQ-like glutamine amidotransferase domain X993_RS17865 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain X993_RS17885 PF07715 TonB-dependent Receptor Plug Domain X993_RS17885 PF00593 TonB dependent receptor X993_RS17915 PF00550 Phosphopantetheine attachment site X993_RS17915 PF00501 AMP-binding enzyme X993_RS17915 PF13193 AMP-binding enzyme C-terminal domain X993_RS17915 PF00668 Condensation domain X993_RS17930 PF00501 AMP-binding enzyme X993_RS17930 PF13193 AMP-binding enzyme C-terminal domain X993_RS17930 PF00668 Condensation domain X993_RS17930 PF00550 Phosphopantetheine attachment site X993_RS18045 PF16591 Helical bimodular sensor domain X993_RS18045 PF00672 HAMP domain X993_RS18045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS18560 PF03147 Ferredoxin-fold anticodon binding domain X993_RS18560 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain X993_RS18560 PF03483 B3/4 domain X993_RS18560 PF01588 Putative tRNA binding domain X993_RS18560 PF03484 tRNA synthetase B5 domain X993_RS18590 PF02824 TGS domain X993_RS18590 PF13291 ACT domain X993_RS18590 PF04607 Region found in RelA / SpoT proteins X993_RS18790 PF00672 HAMP domain X993_RS18790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain X993_RS18790 PF02203 Tar ligand binding domain homologue X993_RS18820 PF00580 UvrD/REP helicase N-terminal domain X993_RS18820 PF13361 UvrD-like helicase C-terminal domain X993_RS18845 PF00672 HAMP domain X993_RS18845 PF13426 PAS domain X993_RS18845 PF00512 His Kinase A (phospho-acceptor) domain X993_RS18845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS18845 PF14827 Double sensory domain of two-component sensor kinase X993_RS19015 PF02272 DHHA1 domain X993_RS19015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain X993_RS19015 PF01411 tRNA synthetases class II (A) X993_RS19045 PF00933 Glycosyl hydrolase family 3 N terminal domain X993_RS19085 PF00672 HAMP domain X993_RS19085 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) X993_RS19085 PF01627 Hpt domain X993_RS19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS19085 PF00072 Response regulator receiver domain X993_RS19085 PF00512 His Kinase A (phospho-acceptor) domain X993_RS19225 PF13296 Putative type VI secretion system Rhs element Vgr X993_RS19225 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) X993_RS19225 PF04717 Type VI secretion system, phage-baseplate injector X993_RS19455 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) X993_RS19455 PF18390 Glycogen debranching enzyme C-terminal domain X993_RS19455 PF00128 Alpha amylase, catalytic domain X993_RS19605 PF17941 Polyphosphate kinase C-terminal domain 1 X993_RS19605 PF13090 Polyphosphate kinase C-terminal domain 2 X993_RS19605 PF13089 Polyphosphate kinase N-terminal domain X993_RS19605 PF02503 Polyphosphate kinase middle domain X993_RS19615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS19615 PF00512 His Kinase A (phospho-acceptor) domain X993_RS19615 PF00989 PAS fold X993_RS19615 PF11808 Phosphate regulon sensor protein PhoR X993_RS19655 PF00809 Pterin binding enzyme X993_RS19770 PF00698 Acyl transferase domain X993_RS20005 PF00474 Sodium:solute symporter family X993_RS20010 PF00474 Sodium:solute symporter family X993_RS20015 PF00474 Sodium:solute symporter family X993_RS20035 PF03350 Uncharacterized protein family, UPF0114 X993_RS20110 PF12344 Ultra-violet resistance protein B X993_RS20110 PF02151 UvrB/uvrC motif X993_RS20110 PF04851 Type III restriction enzyme, res subunit X993_RS20110 PF00271 Helicase conserved C-terminal domain X993_RS20110 PF17757 UvrB interaction domain X993_RS20290 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region X993_RS20290 PF10531 SLBB domain X993_RS20290 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit X993_RS20305 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit X993_RS20405 PF01425 Amidase X993_RS20615 PF07733 Bacterial DNA polymerase III alpha NTPase domain X993_RS20615 PF17657 Bacterial DNA polymerase III alpha subunit finger domain X993_RS20615 PF02811 PHP domain X993_RS20615 PF14579 Helix-hairpin-helix motif X993_RS20615 PF01336 OB-fold nucleic acid binding domain X993_RS20825 PF00521 DNA gyrase/topoisomerase IV, subunit A X993_RS21280 PF00206 Lyase X993_RS21280 PF14698 Argininosuccinate lyase C-terminal X993_RS21485 PF00920 Dehydratase family X993_RS21505 PF03739 Lipopolysaccharide export system permease LptF/LptG X993_RS21745 PF00679 Elongation factor G C-terminus X993_RS21745 PF14492 Elongation Factor G, domain II X993_RS21745 PF00009 Elongation factor Tu GTP binding domain X993_RS21745 PF03144 Elongation factor Tu domain 2 X993_RS21745 PF03764 Elongation factor G, domain IV X993_RS21985 PF07690 Major Facilitator Superfamily X993_RS21995 PF00171 Aldehyde dehydrogenase family X993_RS22270 PF00083 Sugar (and other) transporter X993_RS22380 PF13378 Enolase C-terminal domain-like X993_RS22380 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain X993_RS22765 PF00005 ABC transporter X993_RS22765 PF00664 ABC transporter transmembrane region X993_RS22815 PF02770 Acyl-CoA dehydrogenase, middle domain X993_RS22815 PF12806 Acetyl-CoA dehydrogenase C-terminal like X993_RS22815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain X993_RS22815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain X993_RS23155 PF17760 UvrA interaction domain X993_RS23155 PF17755 UvrA DNA-binding domain X993_RS23155 PF00005 ABC transporter X993_RS23450 PF17657 Bacterial DNA polymerase III alpha subunit finger domain X993_RS23450 PF14579 Helix-hairpin-helix motif X993_RS23450 PF07733 Bacterial DNA polymerase III alpha NTPase domain X993_RS23450 PF02811 PHP domain X993_RS23490 PF02628 Cytochrome oxidase assembly protein X993_RS23800 PF00149 Calcineurin-like phosphoesterase X993_RS23800 PF02872 5'-nucleotidase, C-terminal domain X993_RS23985 PF00202 Aminotransferase class-III X993_RS24255 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion X993_RS24255 PF00529 HlyD membrane-fusion protein of T1SS X993_RS24855 PF00561 alpha/beta hydrolase fold X993_RS24970 PF00672 HAMP domain X993_RS24970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS24970 PF00989 PAS fold X993_RS24970 PF00512 His Kinase A (phospho-acceptor) domain X993_RS25025 PF01131 DNA topoisomerase X993_RS25025 PF01751 Toprim domain X993_RS25235 PF13356 Arm DNA-binding domain X993_RS25235 PF00589 Phage integrase family X993_RS25245 PF12631 MnmE helical domain X993_RS25245 PF10396 GTP-binding protein TrmE N-terminus X993_RS25245 PF01926 50S ribosome-binding GTPase X993_RS25285 PF01751 Toprim domain X993_RS25285 PF18053 DNA gyrase B subunit insert domain X993_RS25285 PF00986 DNA gyrase B subunit, carboxyl terminus X993_RS25285 PF00204 DNA gyrase B X993_RS25285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase X993_RS25720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain X993_RS25720 PF00306 ATP synthase alpha/beta chain, C terminal domain X993_RS25720 PF02874 ATP synthase alpha/beta family, beta-barrel domain X993_RS25745 PF00497 Bacterial extracellular solute-binding proteins, family 3 X993_RS25925 PF02347 Glycine cleavage system P-protein X993_RS26080 PF09588 YqaJ-like viral recombinase domain X993_RS26315 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III X993_RS26315 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal X993_RS26355 PF00669 Bacterial flagellin N-terminal helical region X993_RS26355 PF07196 Flagellin hook IN motif X993_RS26355 PF00700 Bacterial flagellin C-terminal helical region X993_RS26400 PF00691 OmpA family X993_RS26400 PF13677 Membrane MotB of proton-channel complex MotA/MotB X993_RS26480 PF00771 FHIPEP family X993_RS26845 PF04997 RNA polymerase Rpb1, domain 1 X993_RS26845 PF04998 RNA polymerase Rpb1, domain 5 X993_RS26845 PF00623 RNA polymerase Rpb1, domain 2 X993_RS26845 PF04983 RNA polymerase Rpb1, domain 3 X993_RS26845 PF05000 RNA polymerase Rpb1, domain 4 X993_RS26880 PF00679 Elongation factor G C-terminus X993_RS26880 PF14492 Elongation Factor G, domain II X993_RS26880 PF03144 Elongation factor Tu domain 2 X993_RS26880 PF00009 Elongation factor Tu GTP binding domain X993_RS26880 PF03764 Elongation factor G, domain IV X993_RS27050 PF00912 Transglycosylase X993_RS27050 PF17092 Penicillin-binding protein OB-like domain X993_RS27050 PF00905 Penicillin binding protein transpeptidase domain X993_RS27590 PF00557 Metallopeptidase family M24 X993_RS27590 PF01321 Creatinase/Prolidase N-terminal domain X993_RS27870 PF01795 MraW methylase family X993_RS27880 PF03717 Penicillin-binding Protein dimerisation domain X993_RS27880 PF00905 Penicillin binding protein transpeptidase domain X993_RS27930 PF04101 Glycosyltransferase family 28 C-terminal domain X993_RS27930 PF03033 Glycosyltransferase family 28 N-terminal domain X993_RS27975 PF01043 SecA preprotein cross-linking domain X993_RS27975 PF07517 SecA DEAD-like domain X993_RS27975 PF02810 SEC-C motif X993_RS27975 PF07516 SecA Wing and Scaffold domain X993_RS27995 PF01960 ArgJ family X993_RS28100 PF02867 Ribonucleotide reductase, barrel domain X993_RS28100 PF03477 ATP cone domain X993_RS28100 PF00317 Ribonucleotide reductase, all-alpha domain X993_RS28115 PF03477 ATP cone domain X993_RS28115 PF02867 Ribonucleotide reductase, barrel domain X993_RS28115 PF00317 Ribonucleotide reductase, all-alpha domain X993_RS28170 PF01618 MotA/TolQ/ExbB proton channel family X993_RS28235 PF02447 GntP family permease X993_RS28355 PF02798 Glutathione S-transferase, N-terminal domain X993_RS28430 PF05195 Aminopeptidase P, N-terminal domain X993_RS28430 PF00557 Metallopeptidase family M24 X993_RS28525 PF13721 SecD export protein N-terminal TM region X993_RS28525 PF02355 Protein export membrane protein X993_RS28525 PF07549 SecD/SecF GG Motif X993_RS28745 PF02463 RecF/RecN/SMC N terminal domain X993_RS28760 PF00762 Ferrochelatase X993_RS28850 PF08676 MutL C terminal dimerisation domain X993_RS28850 PF01119 DNA mismatch repair protein, C-terminal domain X993_RS28930 PF00288 GHMP kinases N terminal domain X993_RS28930 PF08544 GHMP kinases C terminal X993_RS29185 PF01494 FAD binding domain X993_RS29300 PF10605 3HB-oligomer hydrolase (3HBOH) X993_RS29330 PF07690 Major Facilitator Superfamily X993_RS29520 PF00535 Glycosyl transferase family 2 X993_RS29675 PF04055 Radical SAM superfamily X993_RS29675 PF06969 HemN C-terminal domain X993_RS29830 PF00291 Pyridoxal-phosphate dependent enzyme X993_RS29855 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain X993_RS29855 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain X993_RS29890 PF01580 FtsK/SpoIIIE family X993_RS29890 PF09397 Ftsk gamma domain X993_RS29890 PF17854 FtsK alpha domain X993_RS29890 PF13491 4TM region of DNA translocase FtsK/SpoIIIE X993_RS29905 PF00004 ATPase family associated with various cellular activities (AAA) X993_RS29905 PF16193 AAA C-terminal domain X993_RS29905 PF12002 MgsA AAA+ ATPase C terminal X993_RS29990 PF13291 ACT domain X993_RS29990 PF04607 Region found in RelA / SpoT proteins X993_RS29990 PF02824 TGS domain X993_RS30075 PF17432 Domain of unknown function (DUF3458_C) ARM repeats X993_RS30075 PF11940 Domain of unknown function (DUF3458) Ig-like fold X993_RS30075 PF01433 Peptidase family M1 domain X993_RS30080 PF01433 Peptidase family M1 domain X993_RS30080 PF11940 Domain of unknown function (DUF3458) Ig-like fold X993_RS30080 PF17432 Domain of unknown function (DUF3458_C) ARM repeats X993_RS30160 PF01568 Molydopterin dinucleotide binding domain X993_RS30160 PF04879 Molybdopterin oxidoreductase Fe4S4 domain X993_RS30160 PF00384 Molybdopterin oxidoreductase X993_RS30165 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region X993_RS30165 PF00384 Molybdopterin oxidoreductase X993_RS30165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain X993_RS30165 PF12838 4Fe-4S dicluster domain X993_RS30165 PF01568 Molydopterin dinucleotide binding domain X993_RS30210 PF00294 pfkB family carbohydrate kinase X993_RS30240 PF00528 Binding-protein-dependent transport system inner membrane component X993_RS30280 PF07995 Glucose / Sorbosone dehydrogenase X993_RS30360 PF00303 Thymidylate synthase X993_RS30400 PF01548 Transposase X993_RS30400 PF02371 Transposase IS116/IS110/IS902 family X993_RS30435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain X993_RS30435 PF01842 ACT domain X993_RS30435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain X993_RS30460 PF12804 MobA-like NTP transferase domain X993_RS30475 PF12111 Polyribonucleotide phosphorylase C terminal X993_RS30475 PF10150 Ribonuclease E/G family X993_RS30475 PF00575 S1 RNA binding domain X993_RS30730 PF00005 ABC transporter X993_RS30885 PF02515 CoA-transferase family III X993_RS31095 PF07743 HSCB C-terminal oligomerisation domain X993_RS31120 PF00152 tRNA synthetases class II (D, K and N) X993_RS31120 PF01336 OB-fold nucleic acid binding domain X993_RS31425 PF01367 5'-3' exonuclease, C-terminal SAM fold X993_RS31425 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain X993_RS31425 PF09281 Taq polymerase, exonuclease X993_RS31425 PF00476 DNA polymerase family A X993_RS31430 PF01119 DNA mismatch repair protein, C-terminal domain X993_RS31430 PF08676 MutL C terminal dimerisation domain X993_RS31460 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase X993_RS31460 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain