locus-tag class description FFM54_RS00045 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS00045 PF13977 BetI-type transcriptional repressor, C-terminal FFM54_RS00050 PF00171 Aldehyde dehydrogenase family FFM54_RS00055 PF00732 GMC oxidoreductase FFM54_RS00055 PF05199 GMC oxidoreductase FFM54_RS00085 PF07690 Major Facilitator Superfamily FFM54_RS00090 PF17200 Single Cache domain 2 FFM54_RS00090 PF07730 Histidine kinase FFM54_RS00095 PF00072 Response regulator receiver domain FFM54_RS00100 PF00360 Phytochrome region FFM54_RS00100 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS00100 PF08446 PAS fold FFM54_RS00100 PF01590 GAF domain FFM54_RS00115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFM54_RS00115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFM54_RS00145 PF00313 'Cold-shock' DNA-binding domain FFM54_RS00160 PF01165 Ribosomal protein S21 FFM54_RS00185 PF08669 Glycine cleavage T-protein C-terminal barrel domain FFM54_RS00185 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS00185 PF17806 Sarcosine oxidase A3 domain FFM54_RS00185 PF01571 Aminomethyltransferase folate-binding domain FFM54_RS00190 PF04267 Sarcosine oxidase, delta subunit family FFM54_RS00200 PF01266 FAD dependent oxidoreductase FFM54_RS00205 PF03315 Serine dehydratase beta chain FFM54_RS00205 PF03313 Serine dehydratase alpha chain FFM54_RS00210 PF01965 DJ-1/PfpI family FFM54_RS00210 PF12833 Helix-turn-helix domain FFM54_RS00220 PF04337 Protein of unknown function, DUF480 FFM54_RS00245 PF02322 Cytochrome bd terminal oxidase subunit II FFM54_RS00250 PF01654 Cytochrome bd terminal oxidase subunit I FFM54_RS00265 PF02308 MgtC family FFM54_RS00275 PF13396 Phospholipase_D-nuclease N-terminal FFM54_RS00275 PF13091 PLD-like domain FFM54_RS00295 PF09312 SurA N-terminal domain FFM54_RS00295 PF00639 PPIC-type PPIASE domain FFM54_RS00310 PF01526 Tn3 transposase DDE domain FFM54_RS00310 PF13700 Domain of unknown function (DUF4158) FFM54_RS00345 PF03958 Bacterial type II/III secretion system short domain FFM54_RS00345 PF00263 Bacterial type II and III secretion system protein FFM54_RS00350 PF12833 Helix-turn-helix domain FFM54_RS00365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFM54_RS00365 PF02874 ATP synthase alpha/beta family, beta-barrel domain FFM54_RS00365 PF18269 T3SS EscN ATPase C-terminal domain FFM54_RS00380 PF01514 Secretory protein of YscJ/FliF family FFM54_RS00395 PF01312 FlhB HrpN YscU SpaS Family FFM54_RS00400 PF00771 FHIPEP family FFM54_RS00415 PF00813 FliP family FFM54_RS00420 PF01313 Bacterial export proteins, family 3 FFM54_RS00480 PF07729 FCD domain FFM54_RS00480 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS00485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFM54_RS00485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FFM54_RS00495 PF00596 Class II Aldolase and Adducin N-terminal domain FFM54_RS00500 PF07690 Major Facilitator Superfamily FFM54_RS00505 PF01261 Xylose isomerase-like TIM barrel FFM54_RS00510 PF01370 NAD dependent epimerase/dehydratase family FFM54_RS00550 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FFM54_RS00555 PF12833 Helix-turn-helix domain FFM54_RS00555 PF01965 DJ-1/PfpI family FFM54_RS00560 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS00565 PF00005 ABC transporter FFM54_RS00565 PF00571 CBS domain FFM54_RS00580 PF03358 NADPH-dependent FMN reductase FFM54_RS00605 PF01022 Bacterial regulatory protein, arsR family FFM54_RS00620 PF01758 Sodium Bile acid symporter family FFM54_RS00625 PF05658 Head domain of trimeric autotransporter adhesin FFM54_RS00625 PF03895 YadA-like membrane anchor domain FFM54_RS00625 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS00625 PF05662 Coiled stalk of trimeric autotransporter adhesin FFM54_RS00625 PF05658 Head domain of trimeric autotransporter adhesin FFM54_RS00625 PF05662 Coiled stalk of trimeric autotransporter adhesin FFM54_RS00625 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS00625 PF03895 YadA-like membrane anchor domain FFM54_RS00650 PF05662 Coiled stalk of trimeric autotransporter adhesin FFM54_RS00650 PF05658 Head domain of trimeric autotransporter adhesin FFM54_RS00650 PF05658 Head domain of trimeric autotransporter adhesin FFM54_RS00650 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS00650 PF03895 YadA-like membrane anchor domain FFM54_RS00650 PF03895 YadA-like membrane anchor domain FFM54_RS00650 PF05662 Coiled stalk of trimeric autotransporter adhesin FFM54_RS00650 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS00675 PF02785 Biotin carboxylase C-terminal domain FFM54_RS00675 PF00364 Biotin-requiring enzyme FFM54_RS00675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFM54_RS00675 PF00289 Biotin carboxylase, N-terminal domain FFM54_RS00685 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS00685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FFM54_RS00685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FFM54_RS00690 PF01039 Carboxyl transferase domain FFM54_RS00695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS00695 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS00695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS00720 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFM54_RS00725 PF07732 Multicopper oxidase FFM54_RS00740 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FFM54_RS00740 PF00355 Rieske [2Fe-2S] domain FFM54_RS00780 PF00083 Sugar (and other) transporter FFM54_RS00795 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS00800 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS00800 PF00072 Response regulator receiver domain FFM54_RS00830 PF00171 Aldehyde dehydrogenase family FFM54_RS00835 PF00155 Aminotransferase class I and II FFM54_RS00850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS00850 PF03466 LysR substrate binding domain FFM54_RS00865 PF01266 FAD dependent oxidoreductase FFM54_RS00870 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS00890 PF08220 DeoR-like helix-turn-helix domain FFM54_RS00890 PF00455 DeoR C terminal sensor domain FFM54_RS00910 PF08125 Mannitol dehydrogenase C-terminal domain FFM54_RS00910 PF01232 Mannitol dehydrogenase Rossmann domain FFM54_RS00920 PF13378 Enolase C-terminal domain-like FFM54_RS00920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FFM54_RS00955 PF02540 NAD synthase FFM54_RS00970 PF09370 Phosphoenolpyruvate hydrolase-like FFM54_RS00985 PF07732 Multicopper oxidase FFM54_RS01005 PF01510 N-acetylmuramoyl-L-alanine amidase FFM54_RS01010 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FFM54_RS01015 PF03895 YadA-like membrane anchor domain FFM54_RS01015 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS01015 PF05662 Coiled stalk of trimeric autotransporter adhesin FFM54_RS01015 PF05658 Head domain of trimeric autotransporter adhesin FFM54_RS01030 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS01030 PF00072 Response regulator receiver domain FFM54_RS01035 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS01035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS01050 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FFM54_RS01080 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS01155 PF01227 GTP cyclohydrolase I FFM54_RS01180 PF01609 Transposase DDE domain FFM54_RS01210 PF00072 Response regulator receiver domain FFM54_RS01210 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS01225 PF09119 SicP binding FFM54_RS01235 PF07487 SopE GEF domain FFM54_RS01240 PF01464 Transglycosylase SLT domain FFM54_RS01245 PF00550 Phosphopantetheine attachment site FFM54_RS01255 PF06511 Type III secretion systems tip complex components FFM54_RS01260 PF00816 H-NS histone family FFM54_RS01265 PF09599 Salmonella-Shigella invasin protein C (IpaC_SipC) FFM54_RS01270 PF04888 Secretion system effector C (SseC) like family FFM54_RS01270 PF16535 Type III cell invasion protein SipB FFM54_RS01275 PF07720 Tetratricopeptide repeat FFM54_RS01280 PF01312 FlhB HrpN YscU SpaS Family FFM54_RS01285 PF01311 Bacterial export proteins, family 1 FFM54_RS01290 PF01313 Bacterial export proteins, family 3 FFM54_RS01295 PF00813 FliP family FFM54_RS01350 PF09480 Type III secretion system protein PrgH-EprH (PrgH) FFM54_RS01355 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF FFM54_RS01410 PF07504 Fungalysin/Thermolysin Propeptide Motif FFM54_RS01410 PF01447 Thermolysin metallopeptidase, catalytic domain FFM54_RS01410 PF02868 Thermolysin metallopeptidase, alpha-helical domain FFM54_RS01410 PF01483 Proprotein convertase P-domain FFM54_RS01440 PF00083 Sugar (and other) transporter FFM54_RS01450 PF01070 FMN-dependent dehydrogenase FFM54_RS01465 PF09286 Pro-kumamolisin, activation domain FFM54_RS01465 PF00082 Subtilase family FFM54_RS01470 PF01810 LysE type translocator FFM54_RS01475 PF01037 Lrp/AsnC ligand binding domain FFM54_RS01485 PF01384 Phosphate transporter family FFM54_RS01495 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA FFM54_RS01510 PF00501 AMP-binding enzyme FFM54_RS01510 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS01530 PF00765 Autoinducer synthase FFM54_RS01535 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS01535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FFM54_RS01545 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS01550 PF00005 ABC transporter FFM54_RS01555 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FFM54_RS01565 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FFM54_RS01575 PF11658 Cellulose biosynthesis protein BcsG FFM54_RS01580 PF07238 PilZ domain FFM54_RS01580 PF03552 Cellulose synthase FFM54_RS01580 PF00535 Glycosyl transferase family 2 FFM54_RS01615 PF03170 Bacterial cellulose synthase subunit FFM54_RS01635 PF07804 HipA-like C-terminal domain FFM54_RS01635 PF13657 HipA N-terminal domain FFM54_RS01655 PF03466 LysR substrate binding domain FFM54_RS01655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS01660 PF00491 Arginase family FFM54_RS01765 PF00437 Type II/IV secretion system protein FFM54_RS01775 PF00072 Response regulator receiver domain FFM54_RS01775 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS01820 PF12833 Helix-turn-helix domain FFM54_RS01855 PF01313 Bacterial export proteins, family 3 FFM54_RS01860 PF00813 FliP family FFM54_RS01875 PF00771 FHIPEP family FFM54_RS01880 PF01312 FlhB HrpN YscU SpaS Family FFM54_RS01900 PF01514 Secretory protein of YscJ/FliF family FFM54_RS01915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFM54_RS01915 PF18269 T3SS EscN ATPase C-terminal domain FFM54_RS01915 PF02874 ATP synthase alpha/beta family, beta-barrel domain FFM54_RS01925 PF01311 Bacterial export proteins, family 1 FFM54_RS01950 PF00501 AMP-binding enzyme FFM54_RS01950 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS01950 PF00668 Condensation domain FFM54_RS01950 PF00550 Phosphopantetheine attachment site FFM54_RS01960 PF00668 Condensation domain FFM54_RS01960 PF00550 Phosphopantetheine attachment site FFM54_RS01960 PF00975 Thioesterase domain FFM54_RS01960 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS01960 PF00501 AMP-binding enzyme FFM54_RS01970 PF00202 Aminotransferase class-III FFM54_RS01995 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FFM54_RS01995 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FFM54_RS02000 PF01575 MaoC like domain FFM54_RS02005 PF03328 HpcH/HpaI aldolase/citrate lyase family FFM54_RS02010 PF03466 LysR substrate binding domain FFM54_RS02010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS02025 PF03466 LysR substrate binding domain FFM54_RS02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS02030 PF07690 Major Facilitator Superfamily FFM54_RS02040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS02040 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS02050 PF02954 Bacterial regulatory protein, Fis family FFM54_RS02050 PF00158 Sigma-54 interaction domain FFM54_RS02050 PF00072 Response regulator receiver domain FFM54_RS02080 PF01734 Patatin-like phospholipase FFM54_RS02100 PF00067 Cytochrome P450 FFM54_RS02125 PF14310 Fibronectin type III-like domain FFM54_RS02125 PF01915 Glycosyl hydrolase family 3 C-terminal domain FFM54_RS02125 PF00933 Glycosyl hydrolase family 3 N terminal domain FFM54_RS02135 PF01425 Amidase FFM54_RS02155 PF03144 Elongation factor Tu domain 2 FFM54_RS02155 PF00009 Elongation factor Tu GTP binding domain FFM54_RS02155 PF09106 Elongation factor SelB, winged helix FFM54_RS02155 PF09107 Elongation factor SelB, winged helix FFM54_RS02165 PF04216 Protein involved in formate dehydrogenase formation FFM54_RS02170 PF01292 Prokaryotic cytochrome b561 FFM54_RS02175 PF13247 4Fe-4S dicluster domain FFM54_RS02175 PF09163 Formate dehydrogenase N, transmembrane FFM54_RS02200 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS02215 PF00296 Luciferase-like monooxygenase FFM54_RS02220 PF00296 Luciferase-like monooxygenase FFM54_RS02230 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS02250 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FFM54_RS02270 PF03631 Virulence factor BrkB FFM54_RS02275 PF13609 Gram-negative porin FFM54_RS02300 PF01757 Acyltransferase family FFM54_RS02315 PF00483 Nucleotidyl transferase FFM54_RS02330 PF00534 Glycosyl transferases group 1 FFM54_RS02330 PF13439 Glycosyltransferase Family 4 FFM54_RS02335 PF14667 Polysaccharide biosynthesis C-terminal domain FFM54_RS02335 PF01943 Polysaccharide biosynthesis protein FFM54_RS02350 PF01757 Acyltransferase family FFM54_RS02355 PF16363 GDP-mannose 4,6 dehydratase FFM54_RS02360 PF01370 NAD dependent epimerase/dehydratase family FFM54_RS02375 PF01053 Cys/Met metabolism PLP-dependent enzyme FFM54_RS02380 PF00156 Phosphoribosyl transferase domain FFM54_RS02395 PF02875 Mur ligase family, glutamate ligase domain FFM54_RS02395 PF08245 Mur ligase middle domain FFM54_RS02400 PF17848 Acetyl-coA carboxylase zinc finger domain FFM54_RS02400 PF01039 Carboxyl transferase domain FFM54_RS02405 PF00290 Tryptophan synthase alpha chain FFM54_RS02410 PF01555 DNA methylase FFM54_RS02415 PF00291 Pyridoxal-phosphate dependent enzyme FFM54_RS02420 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FFM54_RS02425 PF01416 tRNA pseudouridine synthase FFM54_RS02440 PF02774 Semialdehyde dehydrogenase, dimerisation domain FFM54_RS02440 PF01118 Semialdehyde dehydrogenase, NAD binding domain FFM54_RS02450 PF00180 Isocitrate/isopropylmalate dehydrogenase FFM54_RS02455 PF00694 Aconitase C-terminal domain FFM54_RS02465 PF00330 Aconitase family (aconitate hydratase) FFM54_RS02475 PF00296 Luciferase-like monooxygenase FFM54_RS02500 PF01037 Lrp/AsnC ligand binding domain FFM54_RS02505 PF00456 Transketolase, thiamine diphosphate binding domain FFM54_RS02505 PF17831 Pyruvate dehydrogenase E1 component middle domain FFM54_RS02510 PF07350 Protein of unknown function (DUF1479) FFM54_RS02530 PF00285 Citrate synthase, C-terminal domain FFM54_RS02535 PF03937 Flavinator of succinate dehydrogenase FFM54_RS02540 PF13085 2Fe-2S iron-sulfur cluster binding domain FFM54_RS02545 PF00890 FAD binding domain FFM54_RS02545 PF02910 Fumarate reductase flavoprotein C-term FFM54_RS02555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FFM54_RS02565 PF07702 UTRA domain FFM54_RS02565 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS02570 PF00056 lactate/malate dehydrogenase, NAD binding domain FFM54_RS02570 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FFM54_RS02585 PF03972 MmgE/PrpD family FFM54_RS02590 PF00330 Aconitase family (aconitate hydratase) FFM54_RS02590 PF00694 Aconitase C-terminal domain FFM54_RS02595 PF05594 Haemagluttinin repeat FFM54_RS02595 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS02595 PF05860 haemagglutination activity domain FFM54_RS02595 PF13332 Hemagglutinin repeat FFM54_RS02600 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FFM54_RS02600 PF08479 POTRA domain, ShlB-type FFM54_RS02600 PF17287 POTRA domain FFM54_RS02615 PF00034 Cytochrome c FFM54_RS02615 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FFM54_RS02630 PF00264 Common central domain of tyrosinase FFM54_RS02655 PF00082 Subtilase family FFM54_RS02655 PF09286 Pro-kumamolisin, activation domain FFM54_RS02660 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS02665 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS02675 PF00005 ABC transporter FFM54_RS02675 PF08402 TOBE domain FFM54_RS02680 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS02680 PF00155 Aminotransferase class I and II FFM54_RS02685 PF03280 Proteobacterial lipase chaperone protein FFM54_RS02690 PF00561 alpha/beta hydrolase fold FFM54_RS02695 PF07715 TonB-dependent Receptor Plug Domain FFM54_RS02695 PF00593 TonB dependent receptor FFM54_RS02705 PF01292 Prokaryotic cytochrome b561 FFM54_RS02715 PF01476 LysM domain FFM54_RS02715 PF01551 Peptidase family M23 FFM54_RS02730 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FFM54_RS02730 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFM54_RS02750 PF02146 Sir2 family FFM54_RS02755 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FFM54_RS02780 PF04545 Sigma-70, region 4 FFM54_RS02780 PF00140 Sigma-70 factor, region 1.2 FFM54_RS02780 PF04542 Sigma-70 region 2 FFM54_RS02780 PF04546 Sigma-70, non-essential region FFM54_RS02780 PF04539 Sigma-70 region 3 FFM54_RS02780 PF03979 Sigma-70 factor, region 1.1 FFM54_RS02790 PF10410 DnaB-helicase binding domain of primase FFM54_RS02790 PF08278 DNA primase DnaG DnaB-binding FFM54_RS02790 PF01807 CHC2 zinc finger FFM54_RS02790 PF08275 DNA primase catalytic core, N-terminal domain FFM54_RS02800 PF01165 Ribosomal protein S21 FFM54_RS02810 PF00814 Glycoprotease family FFM54_RS02820 PF02649 Type I GTP cyclohydrolase folE2 FFM54_RS02825 PF02780 Transketolase, C-terminal domain FFM54_RS02825 PF02779 Transketolase, pyrimidine binding domain FFM54_RS02825 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FFM54_RS02830 PF00348 Polyprenyl synthetase FFM54_RS02835 PF02609 Exonuclease VII small subunit FFM54_RS02850 PF01738 Dienelactone hydrolase family FFM54_RS02870 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS02875 PF01367 5'-3' exonuclease, C-terminal SAM fold FFM54_RS02875 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FFM54_RS02875 PF00476 DNA polymerase family A FFM54_RS02875 PF01612 3'-5' exonuclease FFM54_RS02880 PF03641 Possible lysine decarboxylase FFM54_RS02900 PF04463 Protein of unknown function (DUF523) FFM54_RS02950 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FFM54_RS02950 PF01048 Phosphorylase superfamily FFM54_RS02960 PF01636 Phosphotransferase enzyme family FFM54_RS02995 PF01569 PAP2 superfamily FFM54_RS03015 PF00005 ABC transporter FFM54_RS03015 PF03459 TOBE domain FFM54_RS03030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS03030 PF03459 TOBE domain FFM54_RS03045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS03045 PF03466 LysR substrate binding domain FFM54_RS03060 PF00571 CBS domain FFM54_RS03060 PF03471 Transporter associated domain FFM54_RS03060 PF01595 Cyclin M transmembrane N-terminal domain FFM54_RS03065 PF02581 Thiamine monophosphate synthase FFM54_RS03080 PF13649 Methyltransferase domain FFM54_RS03090 PF01070 FMN-dependent dehydrogenase FFM54_RS03135 PF00682 HMGL-like FFM54_RS03135 PF07836 DmpG-like communication domain FFM54_RS03140 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation FFM54_RS03140 PF01118 Semialdehyde dehydrogenase, NAD binding domain FFM54_RS03145 PF00975 Thioesterase domain FFM54_RS03150 PF01063 Amino-transferase class IV FFM54_RS03155 PF03737 Aldolase/RraA FFM54_RS03160 PF00975 Thioesterase domain FFM54_RS03175 PF00550 Phosphopantetheine attachment site FFM54_RS03175 PF00501 AMP-binding enzyme FFM54_RS03175 PF00668 Condensation domain FFM54_RS03175 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS03215 PF00149 Calcineurin-like phosphoesterase FFM54_RS03225 PF09722 Protein of unknown function (DUF2384) FFM54_RS03240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFM54_RS03250 PF13439 Glycosyltransferase Family 4 FFM54_RS03255 PF13439 Glycosyltransferase Family 4 FFM54_RS03255 PF00534 Glycosyl transferases group 1 FFM54_RS03275 PF13614 AAA domain FFM54_RS03275 PF02706 Chain length determinant protein FFM54_RS03275 PF13807 G-rich domain on putative tyrosine kinase FFM54_RS03280 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FFM54_RS03280 PF10531 SLBB domain FFM54_RS03280 PF02563 Polysaccharide biosynthesis/export protein FFM54_RS03285 PF01451 Low molecular weight phosphotyrosine protein phosphatase FFM54_RS03295 PF02397 Bacterial sugar transferase FFM54_RS03305 PF00483 Nucleotidyl transferase FFM54_RS03305 PF01050 Mannose-6-phosphate isomerase FFM54_RS03325 PF02754 Cysteine-rich domain FFM54_RS03325 PF13183 4Fe-4S dicluster domain FFM54_RS03330 PF02915 Rubrerythrin FFM54_RS03340 PF01510 N-acetylmuramoyl-L-alanine amidase FFM54_RS03355 PF04542 Sigma-70 region 2 FFM54_RS03355 PF08281 Sigma-70, region 4 FFM54_RS03365 PF03795 YCII-related domain FFM54_RS03370 PF03795 YCII-related domain FFM54_RS03405 PF01594 AI-2E family transporter FFM54_RS03415 PF07715 TonB-dependent Receptor Plug Domain FFM54_RS03415 PF00593 TonB dependent receptor FFM54_RS03425 PF07690 Major Facilitator Superfamily FFM54_RS03440 PF00107 Zinc-binding dehydrogenase FFM54_RS03440 PF16884 N-terminal domain of oxidoreductase FFM54_RS03485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS03485 PF03466 LysR substrate binding domain FFM54_RS03515 PF04261 Dyp-type peroxidase family FFM54_RS03530 PF00664 ABC transporter transmembrane region FFM54_RS03530 PF00005 ABC transporter FFM54_RS03535 PF01965 DJ-1/PfpI family FFM54_RS03540 PF01965 DJ-1/PfpI family FFM54_RS03540 PF12833 Helix-turn-helix domain FFM54_RS03550 PF00579 tRNA synthetases class I (W and Y) FFM54_RS03575 PF00654 Voltage gated chloride channel FFM54_RS03595 PF01584 CheW-like domain FFM54_RS03595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS03595 PF00072 Response regulator receiver domain FFM54_RS03595 PF01627 Hpt domain FFM54_RS03615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS03615 PF00672 HAMP domain FFM54_RS03615 PF02743 Cache domain FFM54_RS03620 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS03640 PF00205 Thiamine pyrophosphate enzyme, central domain FFM54_RS03640 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFM54_RS03640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFM54_RS03645 PF00999 Sodium/hydrogen exchanger family FFM54_RS03650 PF04286 Protein of unknown function (DUF445) FFM54_RS03665 PF13091 PLD-like domain FFM54_RS03670 PF01230 HIT domain FFM54_RS03675 PF14759 Reductase C-terminal FFM54_RS03675 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS03680 PF00355 Rieske [2Fe-2S] domain FFM54_RS03685 PF00866 Ring hydroxylating beta subunit FFM54_RS03690 PF00355 Rieske [2Fe-2S] domain FFM54_RS03690 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FFM54_RS03695 PF14525 AraC-binding-like domain FFM54_RS03695 PF12833 Helix-turn-helix domain FFM54_RS03700 PF03466 LysR substrate binding domain FFM54_RS03700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS03705 PF13378 Enolase C-terminal domain-like FFM54_RS03705 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FFM54_RS03710 PF04444 Catechol dioxygenase N terminus FFM54_RS03710 PF00775 Dioxygenase FFM54_RS03715 PF02426 Muconolactone delta-isomerase FFM54_RS03720 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FFM54_RS03725 PF00510 Cytochrome c oxidase subunit III FFM54_RS03730 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFM54_RS03735 PF06481 COX Aromatic Rich Motif FFM54_RS03735 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FFM54_RS03740 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FFM54_RS03740 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS03745 PF02311 AraC-like ligand binding domain FFM54_RS03745 PF12833 Helix-turn-helix domain FFM54_RS03760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS03760 PF03466 LysR substrate binding domain FFM54_RS03765 PF00355 Rieske [2Fe-2S] domain FFM54_RS03765 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FFM54_RS03770 PF00866 Ring hydroxylating beta subunit FFM54_RS03775 PF00111 2Fe-2S iron-sulfur cluster binding domain FFM54_RS03775 PF00175 Oxidoreductase NAD-binding domain FFM54_RS03775 PF00970 Oxidoreductase FAD-binding domain FFM54_RS03780 PF00106 short chain dehydrogenase FFM54_RS03800 PF00857 Isochorismatase family FFM54_RS03825 PF00324 Amino acid permease FFM54_RS03855 PF10996 Beta-Casp domain FFM54_RS03855 PF00753 Metallo-beta-lactamase superfamily FFM54_RS03855 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FFM54_RS03865 PF00106 short chain dehydrogenase FFM54_RS03875 PF00027 Cyclic nucleotide-binding domain FFM54_RS03875 PF13545 Crp-like helix-turn-helix domain FFM54_RS03885 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS03910 PF03641 Possible lysine decarboxylase FFM54_RS03945 PF00009 Elongation factor Tu GTP binding domain FFM54_RS03950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS03950 PF02203 Tar ligand binding domain homologue FFM54_RS03950 PF00672 HAMP domain FFM54_RS03965 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FFM54_RS03965 PF02321 Outer membrane efflux protein FFM54_RS03975 PF00005 ABC transporter FFM54_RS03990 PF00582 Universal stress protein family FFM54_RS04005 PF02321 Outer membrane efflux protein FFM54_RS04010 PF13533 Biotin-lipoyl like FFM54_RS04025 PF13426 PAS domain FFM54_RS04025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS04025 PF00072 Response regulator receiver domain FFM54_RS04035 PF02203 Tar ligand binding domain homologue FFM54_RS04035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS04035 PF00672 HAMP domain FFM54_RS04050 PF00107 Zinc-binding dehydrogenase FFM54_RS04050 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS04075 PF00137 ATP synthase subunit C FFM54_RS04080 PF00119 ATP synthase A chain FFM54_RS04095 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FFM54_RS04115 PF01515 Phosphate acetyl/butaryl transferase FFM54_RS04120 PF00871 Acetokinase family FFM54_RS04135 PF00294 pfkB family carbohydrate kinase FFM54_RS04145 PF04972 BON domain FFM54_RS04160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FFM54_RS04200 PF07662 Na+ dependent nucleoside transporter C-terminus FFM54_RS04200 PF01773 Na+ dependent nucleoside transporter N-terminus FFM54_RS04215 PF02798 Glutathione S-transferase, N-terminal domain FFM54_RS04225 PF03466 LysR substrate binding domain FFM54_RS04225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS04240 PF00106 short chain dehydrogenase FFM54_RS04245 PF00743 Flavin-binding monooxygenase-like FFM54_RS04250 PF00561 alpha/beta hydrolase fold FFM54_RS04260 PF00990 Diguanylate cyclase, GGDEF domain FFM54_RS04260 PF00072 Response regulator receiver domain FFM54_RS04285 PF09286 Pro-kumamolisin, activation domain FFM54_RS04285 PF04151 Bacterial pre-peptidase C-terminal domain FFM54_RS04325 PF13807 G-rich domain on putative tyrosine kinase FFM54_RS04325 PF13614 AAA domain FFM54_RS04325 PF02706 Chain length determinant protein FFM54_RS04340 PF02583 Metal-sensitive transcriptional repressor FFM54_RS04345 PF01545 Cation efflux family FFM54_RS04360 PF03265 Deoxyribonuclease II FFM54_RS04395 PF00596 Class II Aldolase and Adducin N-terminal domain FFM54_RS04400 PF03167 Uracil DNA glycosylase superfamily FFM54_RS04405 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FFM54_RS04405 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FFM54_RS04415 PF00082 Subtilase family FFM54_RS04415 PF04151 Bacterial pre-peptidase C-terminal domain FFM54_RS04450 PF00072 Response regulator receiver domain FFM54_RS04450 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS04455 PF00672 HAMP domain FFM54_RS04455 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS04455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS04465 PF00905 Penicillin binding protein transpeptidase domain FFM54_RS04485 PF03239 Iron permease FTR1 family FFM54_RS04500 PF00117 Glutamine amidotransferase class-I FFM54_RS04500 PF06418 CTP synthase N-terminus FFM54_RS04510 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS04540 PF04820 Tryptophan halogenase FFM54_RS04545 PF08933 Domain of unknown function (DUF1864) FFM54_RS04550 PF04820 Tryptophan halogenase FFM54_RS04555 PF00355 Rieske [2Fe-2S] domain FFM54_RS04575 PF01380 SIS domain FFM54_RS04625 PF02350 UDP-N-acetylglucosamine 2-epimerase FFM54_RS04645 PF03466 LysR substrate binding domain FFM54_RS04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS04650 PF03741 Integral membrane protein TerC family FFM54_RS04650 PF03471 Transporter associated domain FFM54_RS04675 PF00282 Pyridoxal-dependent decarboxylase conserved domain FFM54_RS04695 PF00107 Zinc-binding dehydrogenase FFM54_RS04695 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS04695 PF13823 Alcohol dehydrogenase GroES-associated FFM54_RS04700 PF00282 Pyridoxal-dependent decarboxylase conserved domain FFM54_RS04705 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFM54_RS04705 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFM54_RS04720 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS04720 PF08361 MAATS-type transcriptional repressor, C-terminal region FFM54_RS04725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS04725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS04725 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS04740 PF01039 Carboxyl transferase domain FFM54_RS04745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS04745 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS04745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS04755 PF02785 Biotin carboxylase C-terminal domain FFM54_RS04755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFM54_RS04755 PF00364 Biotin-requiring enzyme FFM54_RS04755 PF00289 Biotin carboxylase, N-terminal domain FFM54_RS04760 PF05853 beta-keto acid cleavage enzyme FFM54_RS04770 PF00501 AMP-binding enzyme FFM54_RS04815 PF00501 AMP-binding enzyme FFM54_RS04835 PF00293 NUDIX domain FFM54_RS04845 PF13419 Haloacid dehalogenase-like hydrolase FFM54_RS04870 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FFM54_RS04870 PF17287 POTRA domain FFM54_RS04870 PF08479 POTRA domain, ShlB-type FFM54_RS04895 PF05860 haemagglutination activity domain FFM54_RS04895 PF13332 Hemagglutinin repeat FFM54_RS04895 PF05594 Haemagluttinin repeat FFM54_RS04895 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS04895 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain FFM54_RS04920 PF03527 RHS protein FFM54_RS04920 PF05593 RHS Repeat FFM54_RS04930 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS04930 PF06715 Gp5 C-terminal repeat (3 copies) FFM54_RS04955 PF05717 IS66 Orf2 like protein FFM54_RS04975 PF16874 Glycosyl hydrolase family 36 C-terminal domain FFM54_RS04975 PF16875 Glycosyl hydrolase family 36 N-terminal domain FFM54_RS04980 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS04985 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS04990 PF01547 Bacterial extracellular solute-binding protein FFM54_RS04995 PF00005 ABC transporter FFM54_RS04995 PF08402 TOBE domain FFM54_RS05010 PF00356 Bacterial regulatory proteins, lacI family FFM54_RS05080 PF13276 HTH-like domain FFM54_RS05080 PF13683 Integrase core domain FFM54_RS05095 PF06715 Gp5 C-terminal repeat (3 copies) FFM54_RS05095 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS05110 PF05947 Type VI secretion system, TssF FFM54_RS05115 PF04965 Gene 25-like lysozyme FFM54_RS05120 PF05638 Type VI secretion system effector, Hcp FFM54_RS05125 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FFM54_RS05130 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FFM54_RS05155 PF14331 ImcF-related N-terminal domain FFM54_RS05155 PF06744 Type VI secretion protein IcmF C-terminal FFM54_RS05155 PF06761 Intracellular multiplication and human macrophage-killing FFM54_RS05160 PF00691 OmpA family FFM54_RS05160 PF13677 Membrane MotB of proton-channel complex MotA/MotB FFM54_RS05165 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FFM54_RS05200 PF01494 FAD binding domain FFM54_RS05205 PF04345 Chorismate lyase FFM54_RS05210 PF04345 Chorismate lyase FFM54_RS05225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS05225 PF03466 LysR substrate binding domain FFM54_RS05235 PF00291 Pyridoxal-phosphate dependent enzyme FFM54_RS05240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS05240 PF03466 LysR substrate binding domain FFM54_RS05255 PF00581 Rhodanese-like domain FFM54_RS05260 PF00753 Metallo-beta-lactamase superfamily FFM54_RS05265 PF07690 Major Facilitator Superfamily FFM54_RS05270 PF00266 Aminotransferase class-V FFM54_RS05290 PF07690 Major Facilitator Superfamily FFM54_RS05290 PF00083 Sugar (and other) transporter FFM54_RS05300 PF03466 LysR substrate binding domain FFM54_RS05300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS05305 PF01070 FMN-dependent dehydrogenase FFM54_RS05310 PF01557 Fumarylacetoacetate (FAA) hydrolase family FFM54_RS05330 PF01425 Amidase FFM54_RS05340 PF13380 CoA binding domain FFM54_RS05340 PF00583 Acetyltransferase (GNAT) family FFM54_RS05340 PF13607 Succinyl-CoA ligase like flavodoxin domain FFM54_RS05355 PF00816 H-NS histone family FFM54_RS05410 PF03573 outer membrane porin, OprD family FFM54_RS05415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFM54_RS05415 PF00005 ABC transporter FFM54_RS05420 PF00005 ABC transporter FFM54_RS05420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFM54_RS05425 PF12911 N-terminal TM domain of oligopeptide transport permease C FFM54_RS05425 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS05430 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS05435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFM54_RS05440 PF07883 Cupin domain FFM54_RS05440 PF01381 Helix-turn-helix FFM54_RS05455 PF00854 POT family FFM54_RS05475 PF03466 LysR substrate binding domain FFM54_RS05475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS05495 PF03328 HpcH/HpaI aldolase/citrate lyase family FFM54_RS05510 PF00857 Isochorismatase family FFM54_RS05535 PF02515 CoA-transferase family III FFM54_RS05545 PF03328 HpcH/HpaI aldolase/citrate lyase family FFM54_RS05575 PF00708 Acylphosphatase FFM54_RS05580 PF01370 NAD dependent epimerase/dehydratase family FFM54_RS05595 PF00535 Glycosyl transferase family 2 FFM54_RS05605 PF02401 LytB protein FFM54_RS05610 PF04055 Radical SAM superfamily FFM54_RS05610 PF06463 Molybdenum Cofactor Synthesis C FFM54_RS05630 PF00202 Aminotransferase class-III FFM54_RS05650 PF04328 Selenoprotein, putative FFM54_RS05655 PF13722 5TM C-terminal transporter carbon starvation CstA FFM54_RS05655 PF02554 Carbon starvation protein CstA FFM54_RS05665 PF00561 alpha/beta hydrolase fold FFM54_RS05675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS05675 PF03466 LysR substrate binding domain FFM54_RS05705 PF00535 Glycosyl transferase family 2 FFM54_RS05780 PF13614 AAA domain FFM54_RS05785 PF00437 Type II/IV secretion system protein FFM54_RS05800 PF01037 Lrp/AsnC ligand binding domain FFM54_RS05810 PF00155 Aminotransferase class I and II FFM54_RS05820 PF13609 Gram-negative porin FFM54_RS05825 PF00324 Amino acid permease FFM54_RS05845 PF07690 Major Facilitator Superfamily FFM54_RS05850 PF03466 LysR substrate binding domain FFM54_RS05850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS05900 PF06628 Catalase-related immune-responsive FFM54_RS05900 PF18011 C-terminal domain found in long catalases FFM54_RS05900 PF00199 Catalase FFM54_RS05920 PF00309 Sigma-54 factor, Activator interacting domain (AID) FFM54_RS05920 PF04963 Sigma-54 factor, core binding domain FFM54_RS05920 PF04552 Sigma-54, DNA binding domain FFM54_RS05930 PF05067 Manganese containing catalase FFM54_RS05935 PF05974 Domain of unknown function (DUF892) FFM54_RS06025 PF00478 IMP dehydrogenase / GMP reductase domain FFM54_RS06025 PF00571 CBS domain FFM54_RS06035 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS06035 PF00072 Response regulator receiver domain FFM54_RS06045 PF03167 Uracil DNA glycosylase superfamily FFM54_RS06050 PF01566 Natural resistance-associated macrophage protein FFM54_RS06055 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS06055 PF13823 Alcohol dehydrogenase GroES-associated FFM54_RS06055 PF00107 Zinc-binding dehydrogenase FFM54_RS06095 PF00106 short chain dehydrogenase FFM54_RS06105 PF13439 Glycosyltransferase Family 4 FFM54_RS06105 PF00534 Glycosyl transferases group 1 FFM54_RS06110 PF16363 GDP-mannose 4,6 dehydratase FFM54_RS06115 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS06115 PF01627 Hpt domain FFM54_RS06115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS06115 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS06115 PF00072 Response regulator receiver domain FFM54_RS06130 PF00158 Sigma-54 interaction domain FFM54_RS06130 PF00072 Response regulator receiver domain FFM54_RS06130 PF02954 Bacterial regulatory protein, Fis family FFM54_RS06145 PF02954 Bacterial regulatory protein, Fis family FFM54_RS06145 PF01590 GAF domain FFM54_RS06145 PF00158 Sigma-54 interaction domain FFM54_RS06165 PF16861 Carbamoyltransferase C-terminus FFM54_RS06165 PF02543 Carbamoyltransferase N-terminus FFM54_RS06190 PF00664 ABC transporter transmembrane region FFM54_RS06190 PF00005 ABC transporter FFM54_RS06205 PF02666 Phosphatidylserine decarboxylase FFM54_RS06210 PF13085 2Fe-2S iron-sulfur cluster binding domain FFM54_RS06225 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFM54_RS06225 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FFM54_RS06230 PF00296 Luciferase-like monooxygenase FFM54_RS06240 PF01648 4'-phosphopantetheinyl transferase superfamily FFM54_RS06260 PF01613 Flavin reductase like domain FFM54_RS06280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFM54_RS06280 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS06285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FFM54_RS06285 PF02817 e3 binding domain FFM54_RS06285 PF00364 Biotin-requiring enzyme FFM54_RS06290 PF02780 Transketolase, C-terminal domain FFM54_RS06290 PF02779 Transketolase, pyrimidine binding domain FFM54_RS06295 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal FFM54_RS06295 PF00676 Dehydrogenase E1 component FFM54_RS06330 PF03466 LysR substrate binding domain FFM54_RS06330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS06345 PF05199 GMC oxidoreductase FFM54_RS06350 PF14759 Reductase C-terminal FFM54_RS06350 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS06385 PF00317 Ribonucleotide reductase, all-alpha domain FFM54_RS06385 PF02867 Ribonucleotide reductase, barrel domain FFM54_RS06385 PF03477 ATP cone domain FFM54_RS06405 PF00916 Sulfate permease family FFM54_RS06405 PF01740 STAS domain FFM54_RS06415 PF00571 CBS domain FFM54_RS06415 PF01769 Divalent cation transporter FFM54_RS06415 PF03448 MgtE intracellular N domain FFM54_RS06430 PF00011 Hsp20/alpha crystallin family FFM54_RS06440 PF13609 Gram-negative porin FFM54_RS06445 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS06445 PF00501 AMP-binding enzyme FFM54_RS06465 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS06465 PF00107 Zinc-binding dehydrogenase FFM54_RS06470 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FFM54_RS06475 PF05853 beta-keto acid cleavage enzyme FFM54_RS06500 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFM54_RS06500 PF00384 Molybdopterin oxidoreductase FFM54_RS06500 PF01568 Molydopterin dinucleotide binding domain FFM54_RS06505 PF12800 4Fe-4S binding domain FFM54_RS06505 PF13247 4Fe-4S dicluster domain FFM54_RS06510 PF04976 DMSO reductase anchor subunit (DmsC) FFM54_RS06545 PF00905 Penicillin binding protein transpeptidase domain FFM54_RS06545 PF00912 Transglycosylase FFM54_RS06545 PF17092 Penicillin-binding protein OB-like domain FFM54_RS06575 PF13609 Gram-negative porin FFM54_RS06585 PF01425 Amidase FFM54_RS06610 PF00583 Acetyltransferase (GNAT) family FFM54_RS06630 PF00005 ABC transporter FFM54_RS06630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFM54_RS06650 PF17200 Single Cache domain 2 FFM54_RS06650 PF07730 Histidine kinase FFM54_RS06655 PF00072 Response regulator receiver domain FFM54_RS06655 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS06675 PF00563 EAL domain FFM54_RS06675 PF08447 PAS fold FFM54_RS06675 PF05231 MASE1 FFM54_RS06675 PF13426 PAS domain FFM54_RS06675 PF00990 Diguanylate cyclase, GGDEF domain FFM54_RS06675 PF08448 PAS fold FFM54_RS06685 PF00561 alpha/beta hydrolase fold FFM54_RS06720 PF00005 ABC transporter FFM54_RS06740 PF00550 Phosphopantetheine attachment site FFM54_RS06740 PF00698 Acyl transferase domain FFM54_RS06740 PF08659 KR domain FFM54_RS06740 PF16197 Ketoacyl-synthetase C-terminal extension FFM54_RS06740 PF00109 Beta-ketoacyl synthase, N-terminal domain FFM54_RS06740 PF02801 Beta-ketoacyl synthase, C-terminal domain FFM54_RS06760 PF00202 Aminotransferase class-III FFM54_RS06770 PF00005 ABC transporter FFM54_RS06775 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS06780 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS06795 PF13249 Squalene-hopene cyclase N-terminal domain FFM54_RS06795 PF13243 Squalene-hopene cyclase C-terminal domain FFM54_RS06820 PF00990 Diguanylate cyclase, GGDEF domain FFM54_RS06830 PF00072 Response regulator receiver domain FFM54_RS06830 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS06840 PF08448 PAS fold FFM54_RS06840 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS06840 PF13188 PAS domain FFM54_RS06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS06840 PF00072 Response regulator receiver domain FFM54_RS06850 PF03358 NADPH-dependent FMN reductase FFM54_RS06855 PF04542 Sigma-70 region 2 FFM54_RS06855 PF08281 Sigma-70, region 4 FFM54_RS06865 PF03960 ArsC family FFM54_RS06875 PF13614 AAA domain FFM54_RS06925 PF00155 Aminotransferase class I and II FFM54_RS06930 PF00107 Zinc-binding dehydrogenase FFM54_RS06930 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS06945 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS06970 PF00180 Isocitrate/isopropylmalate dehydrogenase FFM54_RS06975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS06975 PF03466 LysR substrate binding domain FFM54_RS06990 PF00043 Glutathione S-transferase, C-terminal domain FFM54_RS06990 PF13417 Glutathione S-transferase, N-terminal domain FFM54_RS07020 PF06314 Acetoacetate decarboxylase (ADC) FFM54_RS07025 PF01569 PAP2 superfamily FFM54_RS07045 PF04954 Siderophore-interacting protein FFM54_RS07045 PF08021 Siderophore-interacting FAD-binding domain FFM54_RS07085 PF01938 TRAM domain FFM54_RS07085 PF04055 Radical SAM superfamily FFM54_RS07085 PF00919 Uncharacterized protein family UPF0004 FFM54_RS07095 PF01810 LysE type translocator FFM54_RS07100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS07100 PF03466 LysR substrate binding domain FFM54_RS07105 PF13545 Crp-like helix-turn-helix domain FFM54_RS07105 PF00027 Cyclic nucleotide-binding domain FFM54_RS07110 PF00582 Universal stress protein family FFM54_RS07130 PF00171 Aldehyde dehydrogenase family FFM54_RS07160 PF00132 Bacterial transferase hexapeptide (six repeats) FFM54_RS07175 PF01227 GTP cyclohydrolase I FFM54_RS07180 PF03466 LysR substrate binding domain FFM54_RS07180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS07185 PF01494 FAD binding domain FFM54_RS07190 PF01144 Coenzyme A transferase FFM54_RS07195 PF01144 Coenzyme A transferase FFM54_RS07200 PF00206 Lyase FFM54_RS07200 PF10397 Adenylosuccinate lyase C-terminus FFM54_RS07205 PF12146 Serine aminopeptidase, S33 FFM54_RS07210 PF02627 Carboxymuconolactone decarboxylase family FFM54_RS07215 PF07690 Major Facilitator Superfamily FFM54_RS07240 PF09828 Chromate resistance exported protein FFM54_RS07250 PF02417 Chromate transporter FFM54_RS07255 PF09828 Chromate resistance exported protein FFM54_RS07280 PF08281 Sigma-70, region 4 FFM54_RS07280 PF04542 Sigma-70 region 2 FFM54_RS07285 PF17755 UvrA DNA-binding domain FFM54_RS07285 PF00005 ABC transporter FFM54_RS07285 PF17760 UvrA interaction domain FFM54_RS07320 PF00816 H-NS histone family FFM54_RS07335 PF00083 Sugar (and other) transporter FFM54_RS07340 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS07340 PF02743 Cache domain FFM54_RS07340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS07345 PF00158 Sigma-54 interaction domain FFM54_RS07345 PF02954 Bacterial regulatory protein, Fis family FFM54_RS07345 PF00072 Response regulator receiver domain FFM54_RS07400 PF04185 Phosphoesterase family FFM54_RS07400 PF05506 Domain of unknown function (DUF756) FFM54_RS07420 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FFM54_RS07420 PF12833 Helix-turn-helix domain FFM54_RS07430 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS07435 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS07440 PF13416 Bacterial extracellular solute-binding protein FFM54_RS07475 PF01894 Uncharacterised protein family UPF0047 FFM54_RS07515 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFM54_RS07565 PF00419 Fimbrial protein FFM54_RS07570 PF02753 Pili assembly chaperone PapD, C-terminal domain FFM54_RS07570 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FFM54_RS07575 PF13954 PapC N-terminal domain FFM54_RS07575 PF00577 Outer membrane usher protein FFM54_RS07575 PF13953 PapC C-terminal domain FFM54_RS07590 PF00691 OmpA family FFM54_RS07605 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FFM54_RS07610 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FFM54_RS07625 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FFM54_RS07630 PF04972 BON domain FFM54_RS07630 PF00691 OmpA family FFM54_RS07635 PF06761 Intracellular multiplication and human macrophage-killing FFM54_RS07635 PF14331 ImcF-related N-terminal domain FFM54_RS07635 PF06744 Type VI secretion protein IcmF C-terminal FFM54_RS07645 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS07670 PF06812 ImpA, N-terminal, type VI secretion system FFM54_RS07680 PF05947 Type VI secretion system, TssF FFM54_RS07685 PF04965 Gene 25-like lysozyme FFM54_RS07700 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS07700 PF07724 AAA domain (Cdc48 subfamily) FFM54_RS07700 PF10431 C-terminal, D2-small domain, of ClpB protein FFM54_RS07700 PF17871 AAA lid domain FFM54_RS07705 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS07705 PF00072 Response regulator receiver domain FFM54_RS07705 PF09456 RcsC Alpha-Beta-Loop (ABL) FFM54_RS07735 PF00577 Outer membrane usher protein FFM54_RS07735 PF13953 PapC C-terminal domain FFM54_RS07735 PF13954 PapC N-terminal domain FFM54_RS07775 PF07690 Major Facilitator Superfamily FFM54_RS07780 PF02595 Glycerate kinase family FFM54_RS07785 PF00224 Pyruvate kinase, barrel domain FFM54_RS07785 PF02887 Pyruvate kinase, alpha/beta domain FFM54_RS07790 PF17853 GGDEF-like domain FFM54_RS07790 PF05651 Putative sugar diacid recognition FFM54_RS07790 PF13556 PucR C-terminal helix-turn-helix domain FFM54_RS07805 PF00668 Condensation domain FFM54_RS07805 PF14765 Polyketide synthase dehydratase FFM54_RS07805 PF02801 Beta-ketoacyl synthase, C-terminal domain FFM54_RS07805 PF00501 AMP-binding enzyme FFM54_RS07805 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS07805 PF08659 KR domain FFM54_RS07805 PF00550 Phosphopantetheine attachment site FFM54_RS07805 PF16197 Ketoacyl-synthetase C-terminal extension FFM54_RS07805 PF00109 Beta-ketoacyl synthase, N-terminal domain FFM54_RS07825 PF00891 O-methyltransferase domain FFM54_RS07830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS07830 PF03466 LysR substrate binding domain FFM54_RS07840 PF00563 EAL domain FFM54_RS07840 PF00360 Phytochrome region FFM54_RS07840 PF00990 Diguanylate cyclase, GGDEF domain FFM54_RS07840 PF01590 GAF domain FFM54_RS07885 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS07885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFM54_RS07890 PF13407 Periplasmic binding protein domain FFM54_RS07895 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS07900 PF00005 ABC transporter FFM54_RS07905 PF00480 ROK family FFM54_RS07905 PF01047 MarR family FFM54_RS07920 PF00723 Glycosyl hydrolases family 15 FFM54_RS07920 PF09137 Glucodextranase, domain N FFM54_RS07930 PF00270 DEAD/DEAH box helicase FFM54_RS07930 PF00271 Helicase conserved C-terminal domain FFM54_RS07930 PF03880 DbpA RNA binding domain FFM54_RS07940 PF00083 Sugar (and other) transporter FFM54_RS07940 PF08946 Osmosensory transporter coiled coil FFM54_RS07945 PF01546 Peptidase family M20/M25/M40 FFM54_RS07945 PF07687 Peptidase dimerisation domain FFM54_RS07950 PF03466 LysR substrate binding domain FFM54_RS07950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS07985 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS07990 PF01266 FAD dependent oxidoreductase FFM54_RS07995 PF03466 LysR substrate binding domain FFM54_RS07995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS08005 PF00106 short chain dehydrogenase FFM54_RS08035 PF17678 Glycosyl hydrolase family 92 N-terminal domain FFM54_RS08035 PF07971 Glycosyl hydrolase family 92 FFM54_RS08060 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal FFM54_RS08060 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal FFM54_RS08065 PF00733 Asparagine synthase FFM54_RS08065 PF13537 Glutamine amidotransferase domain FFM54_RS08070 PF00107 Zinc-binding dehydrogenase FFM54_RS08070 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS08080 PF03466 LysR substrate binding domain FFM54_RS08080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS08110 PF13488 Glycine zipper FFM54_RS08110 PF00691 OmpA family FFM54_RS08115 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FFM54_RS08130 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FFM54_RS08135 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FFM54_RS08140 PF10431 C-terminal, D2-small domain, of ClpB protein FFM54_RS08140 PF17871 AAA lid domain FFM54_RS08140 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS08140 PF07724 AAA domain (Cdc48 subfamily) FFM54_RS08165 PF05947 Type VI secretion system, TssF FFM54_RS08175 PF06812 ImpA, N-terminal, type VI secretion system FFM54_RS08180 PF06715 Gp5 C-terminal repeat (3 copies) FFM54_RS08180 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS08225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS08225 PF03466 LysR substrate binding domain FFM54_RS08230 PF02525 Flavodoxin-like fold FFM54_RS08245 PF01053 Cys/Met metabolism PLP-dependent enzyme FFM54_RS08280 PF02626 Carboxyltransferase domain, subdomain A and B FFM54_RS08290 PF00289 Biotin carboxylase, N-terminal domain FFM54_RS08290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFM54_RS08290 PF02785 Biotin carboxylase C-terminal domain FFM54_RS08295 PF00364 Biotin-requiring enzyme FFM54_RS08300 PF03746 LamB/YcsF family FFM54_RS08310 PF03466 LysR substrate binding domain FFM54_RS08310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS08325 PF01804 Penicillin amidase FFM54_RS08335 PF00561 alpha/beta hydrolase fold FFM54_RS08360 PF02203 Tar ligand binding domain homologue FFM54_RS08360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS08360 PF00672 HAMP domain FFM54_RS08370 PF06506 Propionate catabolism activator FFM54_RS08370 PF02954 Bacterial regulatory protein, Fis family FFM54_RS08370 PF00158 Sigma-54 interaction domain FFM54_RS08380 PF00285 Citrate synthase, C-terminal domain FFM54_RS08385 PF00330 Aconitase family (aconitate hydratase) FFM54_RS08385 PF00694 Aconitase C-terminal domain FFM54_RS08390 PF04303 PrpF protein FFM54_RS08425 PF04055 Radical SAM superfamily FFM54_RS08425 PF13186 Iron-sulfur cluster-binding domain FFM54_RS08435 PF00672 HAMP domain FFM54_RS08435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS08435 PF02203 Tar ligand binding domain homologue FFM54_RS08445 PF07690 Major Facilitator Superfamily FFM54_RS08450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS08450 PF03466 LysR substrate binding domain FFM54_RS08460 PF02308 MgtC family FFM54_RS08495 PF00403 Heavy-metal-associated domain FFM54_RS08550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFM54_RS08585 PF02322 Cytochrome bd terminal oxidase subunit II FFM54_RS08590 PF01654 Cytochrome bd terminal oxidase subunit I FFM54_RS08600 PF01212 Beta-eliminating lyase FFM54_RS08615 PF00905 Penicillin binding protein transpeptidase domain FFM54_RS08615 PF17092 Penicillin-binding protein OB-like domain FFM54_RS08615 PF00912 Transglycosylase FFM54_RS08620 PF03458 UPF0126 domain FFM54_RS08625 PF00005 ABC transporter FFM54_RS08635 PF01032 FecCD transport family FFM54_RS08645 PF05171 Haemin-degrading HemS.ChuX domain FFM54_RS08650 PF07715 TonB-dependent Receptor Plug Domain FFM54_RS08650 PF04886 PT repeat FFM54_RS08650 PF00593 TonB dependent receptor FFM54_RS08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS08660 PF03466 LysR substrate binding domain FFM54_RS08675 PF08402 TOBE domain FFM54_RS08675 PF00005 ABC transporter FFM54_RS08695 PF13609 Gram-negative porin FFM54_RS08705 PF02502 Ribose/Galactose Isomerase FFM54_RS08710 PF00005 ABC transporter FFM54_RS08715 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS08720 PF13407 Periplasmic binding protein domain FFM54_RS08730 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS08730 PF00107 Zinc-binding dehydrogenase FFM54_RS08735 PF02733 Dak1 domain FFM54_RS08740 PF02734 DAK2 domain FFM54_RS08745 PF00583 Acetyltransferase (GNAT) family FFM54_RS08765 PF13609 Gram-negative porin FFM54_RS08775 PF03180 NLPA lipoprotein FFM54_RS08795 PF01757 Acyltransferase family FFM54_RS08805 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS08810 PF03466 LysR substrate binding domain FFM54_RS08810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS08815 PF07687 Peptidase dimerisation domain FFM54_RS08815 PF01546 Peptidase family M20/M25/M40 FFM54_RS08825 PF07690 Major Facilitator Superfamily FFM54_RS08835 PF08362 YcdC-like protein, C-terminal region FFM54_RS08835 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS08840 PF09339 IclR helix-turn-helix domain FFM54_RS08840 PF01614 Bacterial transcriptional regulator FFM54_RS08865 PF08447 PAS fold FFM54_RS08865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS08880 PF00355 Rieske [2Fe-2S] domain FFM54_RS08885 PF00355 Rieske [2Fe-2S] domain FFM54_RS08900 PF00171 Aldehyde dehydrogenase family FFM54_RS08905 PF00202 Aminotransferase class-III FFM54_RS08910 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS08910 PF00155 Aminotransferase class I and II FFM54_RS08915 PF03606 C4-dicarboxylate anaerobic carrier FFM54_RS08920 PF09339 IclR helix-turn-helix domain FFM54_RS08920 PF01614 Bacterial transcriptional regulator FFM54_RS08930 PF13609 Gram-negative porin FFM54_RS08955 PF02769 AIR synthase related protein, C-terminal domain FFM54_RS08955 PF00586 AIR synthase related protein, N-terminal domain FFM54_RS08995 PF03466 LysR substrate binding domain FFM54_RS08995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS09000 PF07859 alpha/beta hydrolase fold FFM54_RS09005 PF13533 Biotin-lipoyl like FFM54_RS09010 PF00873 AcrB/AcrD/AcrF family FFM54_RS09015 PF02321 Outer membrane efflux protein FFM54_RS09020 PF00375 Sodium:dicarboxylate symporter family FFM54_RS09050 PF00501 AMP-binding enzyme FFM54_RS09055 PF00698 Acyl transferase domain FFM54_RS09065 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS09065 PF00501 AMP-binding enzyme FFM54_RS09070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FFM54_RS09070 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FFM54_RS09080 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FFM54_RS09080 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FFM54_RS09090 PF00171 Aldehyde dehydrogenase family FFM54_RS09095 PF00202 Aminotransferase class-III FFM54_RS09140 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS09140 PF03472 Autoinducer binding domain FFM54_RS09150 PF03180 NLPA lipoprotein FFM54_RS09155 PF00296 Luciferase-like monooxygenase FFM54_RS09165 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS09175 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS09175 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS09195 PF07729 FCD domain FFM54_RS09195 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS09200 PF02754 Cysteine-rich domain FFM54_RS09205 PF11870 Domain of unknown function (DUF3390) FFM54_RS09205 PF13183 4Fe-4S dicluster domain FFM54_RS09205 PF02589 LUD domain FFM54_RS09210 PF02589 LUD domain FFM54_RS09225 PF07681 DoxX FFM54_RS09235 PF07690 Major Facilitator Superfamily FFM54_RS09240 PF07690 Major Facilitator Superfamily FFM54_RS09250 PF02615 Malate/L-lactate dehydrogenase FFM54_RS09255 PF00171 Aldehyde dehydrogenase family FFM54_RS09260 PF13520 Amino acid permease FFM54_RS09265 PF00701 Dihydrodipicolinate synthetase family FFM54_RS09275 PF05544 Proline racemase FFM54_RS09305 PF01548 Transposase FFM54_RS09305 PF02371 Transposase IS116/IS110/IS902 family FFM54_RS09310 PF01261 Xylose isomerase-like TIM barrel FFM54_RS09310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFM54_RS09320 PF01220 Dehydroquinase class II FFM54_RS09325 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FFM54_RS09325 PF08501 Shikimate dehydrogenase substrate binding domain FFM54_RS09330 PF07690 Major Facilitator Superfamily FFM54_RS09335 PF00266 Aminotransferase class-V FFM54_RS09350 PF00005 ABC transporter FFM54_RS09350 PF08402 TOBE domain FFM54_RS09355 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS09360 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS09365 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase FFM54_RS09370 PF00171 Aldehyde dehydrogenase family FFM54_RS09375 PF01966 HD domain FFM54_RS09425 PF00376 MerR family regulatory protein FFM54_RS09425 PF09278 MerR, DNA binding FFM54_RS09440 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FFM54_RS09445 PF00248 Aldo/keto reductase family FFM54_RS09460 PF00155 Aminotransferase class I and II FFM54_RS09465 PF04851 Type III restriction enzyme, res subunit FFM54_RS09465 PF02151 UvrB/uvrC motif FFM54_RS09465 PF12344 Ultra-violet resistance protein B FFM54_RS09465 PF17757 UvrB interaction domain FFM54_RS09465 PF00271 Helicase conserved C-terminal domain FFM54_RS09470 PF10634 Fe2+ transport protein FFM54_RS09475 PF13473 Cupredoxin-like domain FFM54_RS09480 PF03239 Iron permease FTR1 family FFM54_RS09485 PF04205 FMN-binding domain FFM54_RS09485 PF12801 4Fe-4S binding domain FFM54_RS09490 PF03928 Haem-degrading FFM54_RS09495 PF10636 Hemin uptake protein hemP FFM54_RS09505 PF02678 Pirin FFM54_RS09505 PF05726 Pirin C-terminal cupin domain FFM54_RS09510 PF03466 LysR substrate binding domain FFM54_RS09510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS09520 PF02472 Biopolymer transport protein ExbD/TolR FFM54_RS09525 PF01618 MotA/TolQ/ExbB proton channel family FFM54_RS09540 PF01177 Asp/Glu/Hydantoin racemase FFM54_RS09545 PF00210 Ferritin-like domain FFM54_RS09555 PF03350 Uncharacterized protein family, UPF0114 FFM54_RS09565 PF00501 AMP-binding enzyme FFM54_RS09565 PF16177 Acetyl-coenzyme A synthetase N-terminus FFM54_RS09565 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS09575 PF00474 Sodium:solute symporter family FFM54_RS09645 PF13333 Integrase core domain FFM54_RS09645 PF00665 Integrase core domain FFM54_RS09645 PF13276 HTH-like domain FFM54_RS09665 PF00034 Cytochrome c FFM54_RS09665 PF03150 Di-haem cytochrome c peroxidase FFM54_RS09670 PF03009 Glycerophosphoryl diester phosphodiesterase family FFM54_RS09730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFM54_RS09730 PF00205 Thiamine pyrophosphate enzyme, central domain FFM54_RS09730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFM54_RS09735 PF06082 Exopolysaccharide biosynthesis protein YbjH FFM54_RS09760 PF02563 Polysaccharide biosynthesis/export protein FFM54_RS09760 PF10531 SLBB domain FFM54_RS09770 PF00483 Nucleotidyl transferase FFM54_RS09775 PF16363 GDP-mannose 4,6 dehydratase FFM54_RS09780 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFM54_RS09785 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFM54_RS09835 PF03466 LysR substrate binding domain FFM54_RS09835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS09840 PF17954 Quercetinase C-terminal cupin domain FFM54_RS09840 PF02678 Pirin FFM54_RS09855 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS09870 PF12833 Helix-turn-helix domain FFM54_RS09880 PF07690 Major Facilitator Superfamily FFM54_RS09890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS09890 PF03466 LysR substrate binding domain FFM54_RS09895 PF00857 Isochorismatase family FFM54_RS09905 PF07969 Amidohydrolase family FFM54_RS09925 PF00561 alpha/beta hydrolase fold FFM54_RS09930 PF03466 LysR substrate binding domain FFM54_RS09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS09950 PF01613 Flavin reductase like domain FFM54_RS09960 PF00155 Aminotransferase class I and II FFM54_RS09960 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS09975 PF00768 D-alanyl-D-alanine carboxypeptidase FFM54_RS09995 PF14791 DNA polymerase beta thumb FFM54_RS09995 PF14716 Helix-hairpin-helix domain FFM54_RS09995 PF02811 PHP domain FFM54_RS10035 PF02203 Tar ligand binding domain homologue FFM54_RS10035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS10035 PF00672 HAMP domain FFM54_RS10040 PF01266 FAD dependent oxidoreductase FFM54_RS10045 PF01266 FAD dependent oxidoreductase FFM54_RS10055 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS10060 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS10065 PF08402 TOBE domain FFM54_RS10065 PF00005 ABC transporter FFM54_RS10070 PF13416 Bacterial extracellular solute-binding protein FFM54_RS10080 PF00120 Glutamine synthetase, catalytic domain FFM54_RS10085 PF07722 Peptidase C26 FFM54_RS10100 PF01381 Helix-turn-helix FFM54_RS10100 PF07883 Cupin domain FFM54_RS10105 PF00171 Aldehyde dehydrogenase family FFM54_RS10110 PF00491 Arginase family FFM54_RS10120 PF00166 Chaperonin 10 Kd subunit FFM54_RS10125 PF00118 TCP-1/cpn60 chaperonin family FFM54_RS10135 PF00317 Ribonucleotide reductase, all-alpha domain FFM54_RS10135 PF02867 Ribonucleotide reductase, barrel domain FFM54_RS10135 PF03477 ATP cone domain FFM54_RS10150 PF00501 AMP-binding enzyme FFM54_RS10150 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS10155 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FFM54_RS10155 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FFM54_RS10160 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FFM54_RS10160 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FFM54_RS10165 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FFM54_RS10165 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FFM54_RS10175 PF00501 AMP-binding enzyme FFM54_RS10210 PF13192 Thioredoxin domain FFM54_RS10210 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS10215 PF10417 C-terminal domain of 1-Cys peroxiredoxin FFM54_RS10215 PF00578 AhpC/TSA family FFM54_RS10235 PF00881 Nitroreductase family FFM54_RS10245 PF14403 Circularly permuted ATP-grasp type 2 FFM54_RS10270 PF14403 Circularly permuted ATP-grasp type 2 FFM54_RS10270 PF04168 A predicted alpha-helical domain with a conserved ER motif. FFM54_RS10275 PF08379 Bacterial transglutaminase-like N-terminal region FFM54_RS10275 PF01841 Transglutaminase-like superfamily FFM54_RS10280 PF00155 Aminotransferase class I and II FFM54_RS10280 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS10285 PF07690 Major Facilitator Superfamily FFM54_RS10295 PF04632 Fusaric acid resistance protein family FFM54_RS10300 PF12833 Helix-turn-helix domain FFM54_RS10300 PF01965 DJ-1/PfpI family FFM54_RS10305 PF01965 DJ-1/PfpI family FFM54_RS10310 PF00266 Aminotransferase class-V FFM54_RS10315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFM54_RS10315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFM54_RS10345 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FFM54_RS10345 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FFM54_RS10360 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FFM54_RS10365 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FFM54_RS10380 PF05947 Type VI secretion system, TssF FFM54_RS10390 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS10390 PF10431 C-terminal, D2-small domain, of ClpB protein FFM54_RS10390 PF07724 AAA domain (Cdc48 subfamily) FFM54_RS10390 PF17871 AAA lid domain FFM54_RS10395 PF06715 Gp5 C-terminal repeat (3 copies) FFM54_RS10395 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS10400 PF06715 Gp5 C-terminal repeat (3 copies) FFM54_RS10400 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS10430 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FFM54_RS10440 PF06744 Type VI secretion protein IcmF C-terminal FFM54_RS10440 PF06761 Intracellular multiplication and human macrophage-killing FFM54_RS10440 PF14331 ImcF-related N-terminal domain FFM54_RS10465 PF00561 alpha/beta hydrolase fold FFM54_RS10475 PF03033 Glycosyltransferase family 28 N-terminal domain FFM54_RS10485 PF00535 Glycosyl transferase family 2 FFM54_RS10505 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFM54_RS10505 PF00529 HlyD membrane-fusion protein of T1SS FFM54_RS10515 PF08244 Glycosyl hydrolases family 32 C terminal FFM54_RS10515 PF00251 Glycosyl hydrolases family 32 N-terminal domain FFM54_RS10520 PF02435 Levansucrase/Invertase FFM54_RS10525 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FFM54_RS10525 PF00356 Bacterial regulatory proteins, lacI family FFM54_RS10530 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS10530 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FFM54_RS10535 PF01965 DJ-1/PfpI family FFM54_RS10535 PF12833 Helix-turn-helix domain FFM54_RS10545 PF00464 Serine hydroxymethyltransferase FFM54_RS10550 PF01244 Membrane dipeptidase (Peptidase family M19) FFM54_RS10560 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FFM54_RS10565 PF13183 4Fe-4S dicluster domain FFM54_RS10565 PF02754 Cysteine-rich domain FFM54_RS10570 PF01012 Electron transfer flavoprotein domain FFM54_RS10570 PF00766 Electron transfer flavoprotein FAD-binding domain FFM54_RS10580 PF00355 Rieske [2Fe-2S] domain FFM54_RS10580 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FFM54_RS10585 PF00175 Oxidoreductase NAD-binding domain FFM54_RS10585 PF00970 Oxidoreductase FAD-binding domain FFM54_RS10585 PF00111 2Fe-2S iron-sulfur cluster binding domain FFM54_RS10590 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FFM54_RS10600 PF00551 Formyl transferase FFM54_RS10605 PF03466 LysR substrate binding domain FFM54_RS10605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS10610 PF00884 Sulfatase FFM54_RS10610 PF12411 Choline sulfatase enzyme C terminal FFM54_RS10625 PF00267 Gram-negative porin FFM54_RS10630 PF04389 Peptidase family M28 FFM54_RS10630 PF04151 Bacterial pre-peptidase C-terminal domain FFM54_RS10635 PF03413 Peptidase propeptide and YPEB domain FFM54_RS10635 PF01447 Thermolysin metallopeptidase, catalytic domain FFM54_RS10635 PF02868 Thermolysin metallopeptidase, alpha-helical domain FFM54_RS10635 PF07504 Fungalysin/Thermolysin Propeptide Motif FFM54_RS10640 PF12833 Helix-turn-helix domain FFM54_RS10640 PF01965 DJ-1/PfpI family FFM54_RS10645 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FFM54_RS10650 PF05853 beta-keto acid cleavage enzyme FFM54_RS10655 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FFM54_RS10655 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FFM54_RS10665 PF07859 alpha/beta hydrolase fold FFM54_RS10680 PF00106 short chain dehydrogenase FFM54_RS10700 PF01266 FAD dependent oxidoreductase FFM54_RS10710 PF13458 Periplasmic binding protein FFM54_RS10715 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS10720 PF11862 Domain of unknown function (DUF3382) FFM54_RS10720 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS10725 PF12399 Branched-chain amino acid ATP-binding cassette transporter FFM54_RS10725 PF00005 ABC transporter FFM54_RS10730 PF00005 ABC transporter FFM54_RS10745 PF00425 chorismate binding enzyme FFM54_RS10750 PF01817 Chorismate mutase type II FFM54_RS10755 PF00975 Thioesterase domain FFM54_RS10760 PF00501 AMP-binding enzyme FFM54_RS10760 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS10765 PF12833 Helix-turn-helix domain FFM54_RS10790 PF00005 ABC transporter FFM54_RS10795 PF07715 TonB-dependent Receptor Plug Domain FFM54_RS10795 PF00593 TonB dependent receptor FFM54_RS10830 PF01590 GAF domain FFM54_RS10830 PF00158 Sigma-54 interaction domain FFM54_RS10830 PF02954 Bacterial regulatory protein, Fis family FFM54_RS10865 PF00860 Permease family FFM54_RS10905 PF03466 LysR substrate binding domain FFM54_RS10905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS10910 PF00171 Aldehyde dehydrogenase family FFM54_RS10915 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FFM54_RS10920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFM54_RS10920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFM54_RS10940 PF00106 short chain dehydrogenase FFM54_RS10940 PF00561 alpha/beta hydrolase fold FFM54_RS10955 PF01145 SPFH domain / Band 7 family FFM54_RS10970 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS10970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS10970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS10975 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS10975 PF00501 AMP-binding enzyme FFM54_RS10980 PF00171 Aldehyde dehydrogenase family FFM54_RS10985 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FFM54_RS10985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFM54_RS10990 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS10995 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS11005 PF02321 Outer membrane efflux protein FFM54_RS11010 PF02687 FtsX-like permease family FFM54_RS11010 PF00005 ABC transporter FFM54_RS11010 PF12704 MacB-like periplasmic core domain FFM54_RS11015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFM54_RS11025 PF00296 Luciferase-like monooxygenase FFM54_RS11045 PF04960 Glutaminase FFM54_RS11055 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS11055 PF00072 Response regulator receiver domain FFM54_RS11060 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS11060 PF00672 HAMP domain FFM54_RS11060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS11085 PF00034 Cytochrome c FFM54_RS11120 PF18029 Glyoxalase-like domain FFM54_RS11145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS11145 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS11150 PF00072 Response regulator receiver domain FFM54_RS11150 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS11175 PF00581 Rhodanese-like domain FFM54_RS11235 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FFM54_RS11235 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FFM54_RS11295 PF05658 Head domain of trimeric autotransporter adhesin FFM54_RS11295 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS11295 PF03895 YadA-like membrane anchor domain FFM54_RS11295 PF05662 Coiled stalk of trimeric autotransporter adhesin FFM54_RS11305 PF00072 Response regulator receiver domain FFM54_RS11310 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FFM54_RS11315 PF08453 Peptidase family M9 N-terminal FFM54_RS11315 PF01752 Collagenase FFM54_RS11335 PF06224 Winged helix DNA-binding domain FFM54_RS11345 PF07690 Major Facilitator Superfamily FFM54_RS11355 PF01204 Trehalase FFM54_RS11375 PF00510 Cytochrome c oxidase subunit III FFM54_RS11405 PF13537 Glutamine amidotransferase domain FFM54_RS11405 PF00733 Asparagine synthase FFM54_RS11410 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS11410 PF00072 Response regulator receiver domain FFM54_RS11425 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FFM54_RS11430 PF01799 [2Fe-2S] binding domain FFM54_RS11430 PF00111 2Fe-2S iron-sulfur cluster binding domain FFM54_RS11435 PF12833 Helix-turn-helix domain FFM54_RS11435 PF06719 AraC-type transcriptional regulator N-terminus FFM54_RS11470 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS11470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS11475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS11475 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS11480 PF00296 Luciferase-like monooxygenase FFM54_RS11490 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS11490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS11490 PF00672 HAMP domain FFM54_RS11495 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS11495 PF00072 Response regulator receiver domain FFM54_RS11510 PF01047 MarR family FFM54_RS11515 PF01557 Fumarylacetoacetate (FAA) hydrolase family FFM54_RS11520 PF01557 Fumarylacetoacetate (FAA) hydrolase family FFM54_RS11525 PF00171 Aldehyde dehydrogenase family FFM54_RS11530 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FFM54_RS11540 PF01557 Fumarylacetoacetate (FAA) hydrolase family FFM54_RS11550 PF12833 Helix-turn-helix domain FFM54_RS11550 PF02311 AraC-like ligand binding domain FFM54_RS11560 PF13609 Gram-negative porin FFM54_RS11565 PF00005 ABC transporter FFM54_RS11565 PF08402 TOBE domain FFM54_RS11570 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS11580 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS11580 PF00072 Response regulator receiver domain FFM54_RS11585 PF08521 Two-component sensor kinase N-terminal FFM54_RS11585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS11585 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS11595 PF03476 MOSC N-terminal beta barrel domain FFM54_RS11595 PF03473 MOSC domain FFM54_RS11595 PF00111 2Fe-2S iron-sulfur cluster binding domain FFM54_RS11615 PF13609 Gram-negative porin FFM54_RS11630 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS11640 PF00842 Alanine racemase, C-terminal domain FFM54_RS11640 PF01168 Alanine racemase, N-terminal domain FFM54_RS11660 PF12867 DinB superfamily FFM54_RS11660 PF03781 Sulfatase-modifying factor enzyme 1 FFM54_RS11665 PF10017 Histidine-specific methyltransferase, SAM-dependent FFM54_RS11700 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS11700 PF16925 Tetracyclin repressor-like, C-terminal domain FFM54_RS11720 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FFM54_RS11750 PF01594 AI-2E family transporter FFM54_RS11760 PF00106 short chain dehydrogenase FFM54_RS11770 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS11770 PF00155 Aminotransferase class I and II FFM54_RS11790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS11790 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS11800 PF13545 Crp-like helix-turn-helix domain FFM54_RS11800 PF00027 Cyclic nucleotide-binding domain FFM54_RS11805 PF00501 AMP-binding enzyme FFM54_RS11805 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS11820 PF00672 HAMP domain FFM54_RS11820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS11820 PF02203 Tar ligand binding domain homologue FFM54_RS11825 PF02321 Outer membrane efflux protein FFM54_RS11830 PF00535 Glycosyl transferase family 2 FFM54_RS11830 PF07238 PilZ domain FFM54_RS11830 PF03552 Cellulose synthase FFM54_RS11900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS11900 PF03466 LysR substrate binding domain FFM54_RS11905 PF00202 Aminotransferase class-III FFM54_RS11910 PF00171 Aldehyde dehydrogenase family FFM54_RS11925 PF01527 Transposase FFM54_RS11955 PF00267 Gram-negative porin FFM54_RS11970 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS11980 PF02803 Thiolase, C-terminal domain FFM54_RS11980 PF00108 Thiolase, N-terminal domain FFM54_RS11985 PF00501 AMP-binding enzyme FFM54_RS11985 PF14535 AMP-binding enzyme C-terminal domain FFM54_RS11990 PF02515 CoA-transferase family III FFM54_RS12005 PF00111 2Fe-2S iron-sulfur cluster binding domain FFM54_RS12005 PF00970 Oxidoreductase FAD-binding domain FFM54_RS12005 PF00175 Oxidoreductase NAD-binding domain FFM54_RS12015 PF13458 Periplasmic binding protein FFM54_RS12025 PF00155 Aminotransferase class I and II FFM54_RS12030 PF00106 short chain dehydrogenase FFM54_RS12060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS12060 PF03466 LysR substrate binding domain FFM54_RS12080 PF07690 Major Facilitator Superfamily FFM54_RS12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS12085 PF03466 LysR substrate binding domain FFM54_RS12100 PF07690 Major Facilitator Superfamily FFM54_RS12105 PF09339 IclR helix-turn-helix domain FFM54_RS12105 PF01614 Bacterial transcriptional regulator FFM54_RS12110 PF03459 TOBE domain FFM54_RS12110 PF00005 ABC transporter FFM54_RS12110 PF17912 MalK OB fold domain FFM54_RS12120 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS12125 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS12130 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FFM54_RS12130 PF13378 Enolase C-terminal domain-like FFM54_RS12150 PF00248 Aldo/keto reductase family FFM54_RS12165 PF01557 Fumarylacetoacetate (FAA) hydrolase family FFM54_RS12195 PF13609 Gram-negative porin FFM54_RS12220 PF03576 Peptidase family S58 FFM54_RS12235 PF04632 Fusaric acid resistance protein family FFM54_RS12240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS12240 PF03466 LysR substrate binding domain FFM54_RS12265 PF13609 Gram-negative porin FFM54_RS12280 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FFM54_RS12285 PF13556 PucR C-terminal helix-turn-helix domain FFM54_RS12285 PF17853 GGDEF-like domain FFM54_RS12290 PF07969 Amidohydrolase family FFM54_RS12295 PF07690 Major Facilitator Superfamily FFM54_RS12305 PF00106 short chain dehydrogenase FFM54_RS12320 PF00654 Voltage gated chloride channel FFM54_RS12330 PF14376 Haem-binding domain FFM54_RS12330 PF00034 Cytochrome c FFM54_RS12330 PF03150 Di-haem cytochrome c peroxidase FFM54_RS12335 PF05506 Domain of unknown function (DUF756) FFM54_RS12335 PF04185 Phosphoesterase family FFM54_RS12345 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS12345 PF00072 Response regulator receiver domain FFM54_RS12370 PF01047 MarR family FFM54_RS12385 PF08450 SMP-30/Gluconolactonase/LRE-like region FFM54_RS12430 PF00501 AMP-binding enzyme FFM54_RS12430 PF07993 Male sterility protein FFM54_RS12430 PF00550 Phosphopantetheine attachment site FFM54_RS12450 PF13609 Gram-negative porin FFM54_RS12455 PF07519 Tannase and feruloyl esterase FFM54_RS12480 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS12490 PF08666 SAF domain FFM54_RS12490 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FFM54_RS12510 PF01557 Fumarylacetoacetate (FAA) hydrolase family FFM54_RS12545 PF05658 Head domain of trimeric autotransporter adhesin FFM54_RS12545 PF05658 Head domain of trimeric autotransporter adhesin FFM54_RS12545 PF05662 Coiled stalk of trimeric autotransporter adhesin FFM54_RS12545 PF05662 Coiled stalk of trimeric autotransporter adhesin FFM54_RS12545 PF03895 YadA-like membrane anchor domain FFM54_RS12545 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS12545 PF03895 YadA-like membrane anchor domain FFM54_RS12545 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS12555 PF00816 H-NS histone family FFM54_RS12560 PF01614 Bacterial transcriptional regulator FFM54_RS12560 PF09339 IclR helix-turn-helix domain FFM54_RS12600 PF13458 Periplasmic binding protein FFM54_RS12610 PF03006 Haemolysin-III related FFM54_RS12620 PF03707 Bacterial signalling protein N terminal repeat FFM54_RS12620 PF00990 Diguanylate cyclase, GGDEF domain FFM54_RS12620 PF00563 EAL domain FFM54_RS12630 PF01037 Lrp/AsnC ligand binding domain FFM54_RS12640 PF00324 Amino acid permease FFM54_RS12645 PF00155 Aminotransferase class I and II FFM54_RS12700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS12700 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS12700 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS12705 PF00072 Response regulator receiver domain FFM54_RS12705 PF01339 CheB methylesterase FFM54_RS12720 PF01835 MG2 domain FFM54_RS12720 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FFM54_RS12720 PF07703 Alpha-2-macroglobulin bait region domain FFM54_RS12720 PF00207 Alpha-2-macroglobulin family FFM54_RS12755 PF17284 Spermidine synthase tetramerisation domain FFM54_RS12770 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FFM54_RS12775 PF00398 Ribosomal RNA adenine dimethylase FFM54_RS12795 PF08453 Peptidase family M9 N-terminal FFM54_RS12795 PF01752 Collagenase FFM54_RS12810 PF01494 FAD binding domain FFM54_RS12850 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS12850 PF00072 Response regulator receiver domain FFM54_RS12865 PF00582 Universal stress protein family FFM54_RS12875 PF00582 Universal stress protein family FFM54_RS12885 PF13823 Alcohol dehydrogenase GroES-associated FFM54_RS12885 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS12885 PF00107 Zinc-binding dehydrogenase FFM54_RS12915 PF00106 short chain dehydrogenase FFM54_RS12935 PF00324 Amino acid permease FFM54_RS12950 PF00816 H-NS histone family FFM54_RS12990 PF00296 Luciferase-like monooxygenase FFM54_RS13005 PF00294 pfkB family carbohydrate kinase FFM54_RS13020 PF08774 VRR-NUC domain FFM54_RS13020 PF18081 Fanconi anemia-associated nuclease SAP domain FFM54_RS13040 PF07687 Peptidase dimerisation domain FFM54_RS13040 PF01546 Peptidase family M20/M25/M40 FFM54_RS13050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS13050 PF03466 LysR substrate binding domain FFM54_RS13060 PF03466 LysR substrate binding domain FFM54_RS13060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS13065 PF00248 Aldo/keto reductase family FFM54_RS13075 PF10703 MoaF N-terminal domain FFM54_RS13075 PF17409 MoaF C-terminal domain FFM54_RS13085 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS13090 PF00171 Aldehyde dehydrogenase family FFM54_RS13095 PF00202 Aminotransferase class-III FFM54_RS13100 PF13520 Amino acid permease FFM54_RS13115 PF13609 Gram-negative porin FFM54_RS13130 PF00583 Acetyltransferase (GNAT) family FFM54_RS13135 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FFM54_RS13150 PF13609 Gram-negative porin FFM54_RS13160 PF01272 Transcription elongation factor, GreA/GreB, C-term FFM54_RS13160 PF03449 Transcription elongation factor, N-terminal FFM54_RS13175 PF00478 IMP dehydrogenase / GMP reductase domain FFM54_RS13175 PF00571 CBS domain FFM54_RS13180 PF00925 GTP cyclohydrolase II FFM54_RS13190 PF00765 Autoinducer synthase FFM54_RS13205 PF03472 Autoinducer binding domain FFM54_RS13205 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS13210 PF02308 MgtC family FFM54_RS13220 PF00149 Calcineurin-like phosphoesterase FFM54_RS13225 PF00881 Nitroreductase family FFM54_RS13235 PF01614 Bacterial transcriptional regulator FFM54_RS13235 PF09339 IclR helix-turn-helix domain FFM54_RS13240 PF13609 Gram-negative porin FFM54_RS13250 PF00355 Rieske [2Fe-2S] domain FFM54_RS13260 PF00355 Rieske [2Fe-2S] domain FFM54_RS13275 PF12697 Alpha/beta hydrolase family FFM54_RS13280 PF01614 Bacterial transcriptional regulator FFM54_RS13280 PF09339 IclR helix-turn-helix domain FFM54_RS13290 PF00205 Thiamine pyrophosphate enzyme, central domain FFM54_RS13290 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFM54_RS13290 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFM54_RS13295 PF03447 Homoserine dehydrogenase, NAD binding domain FFM54_RS13295 PF01958 Domain of unknown function DUF108 FFM54_RS13300 PF00171 Aldehyde dehydrogenase family FFM54_RS13310 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS13310 PF14759 Reductase C-terminal FFM54_RS13315 PF00083 Sugar (and other) transporter FFM54_RS13325 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS13325 PF03895 YadA-like membrane anchor domain FFM54_RS13325 PF05662 Coiled stalk of trimeric autotransporter adhesin FFM54_RS13325 PF05658 Head domain of trimeric autotransporter adhesin FFM54_RS13330 PF01389 OmpA-like transmembrane domain FFM54_RS13330 PF00691 OmpA family FFM54_RS13345 PF01425 Amidase FFM54_RS13355 PF01037 Lrp/AsnC ligand binding domain FFM54_RS13365 PF01053 Cys/Met metabolism PLP-dependent enzyme FFM54_RS13410 PF13333 Integrase core domain FFM54_RS13410 PF00665 Integrase core domain FFM54_RS13410 PF13276 HTH-like domain FFM54_RS13415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS13415 PF03466 LysR substrate binding domain FFM54_RS13425 PF07690 Major Facilitator Superfamily FFM54_RS13435 PF00561 alpha/beta hydrolase fold FFM54_RS13445 PF00106 short chain dehydrogenase FFM54_RS13450 PF00743 Flavin-binding monooxygenase-like FFM54_RS13455 PF07947 YhhN family FFM54_RS13465 PF09084 NMT1/THI5 like FFM54_RS13490 PF07690 Major Facilitator Superfamily FFM54_RS13495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS13495 PF02203 Tar ligand binding domain homologue FFM54_RS13495 PF00672 HAMP domain FFM54_RS13535 PF02423 Ornithine cyclodeaminase/mu-crystallin family FFM54_RS13540 PF00756 Putative esterase FFM54_RS13560 PF13609 Gram-negative porin FFM54_RS13575 PF01551 Peptidase family M23 FFM54_RS13575 PF01476 LysM domain FFM54_RS13595 PF03466 LysR substrate binding domain FFM54_RS13595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS13610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFM54_RS13610 PF00005 ABC transporter FFM54_RS13615 PF00005 ABC transporter FFM54_RS13615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFM54_RS13620 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS13620 PF12911 N-terminal TM domain of oligopeptide transport permease C FFM54_RS13625 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS13630 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFM54_RS13635 PF01427 D-ala-D-ala dipeptidase FFM54_RS13660 PF06715 Gp5 C-terminal repeat (3 copies) FFM54_RS13660 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS13670 PF05593 RHS Repeat FFM54_RS13670 PF03527 RHS protein FFM54_RS13705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFM54_RS13715 PF00190 Cupin FFM54_RS13720 PF01566 Natural resistance-associated macrophage protein FFM54_RS13735 PF05360 yiaA/B two helix domain FFM54_RS13740 PF01062 Bestrophin, RFP-TM, chloride channel FFM54_RS13745 PF00384 Molybdopterin oxidoreductase FFM54_RS13750 PF00155 Aminotransferase class I and II FFM54_RS13750 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS13765 PF00689 Cation transporting ATPase, C-terminus FFM54_RS13765 PF00690 Cation transporter/ATPase, N-terminus FFM54_RS13770 PF00082 Subtilase family FFM54_RS13770 PF04151 Bacterial pre-peptidase C-terminal domain FFM54_RS13790 PF05199 GMC oxidoreductase FFM54_RS13790 PF00732 GMC oxidoreductase FFM54_RS13795 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FFM54_RS13795 PF00034 Cytochrome c FFM54_RS13800 PF07681 DoxX FFM54_RS13805 PF13609 Gram-negative porin FFM54_RS13810 PF10997 Alternate to MurJ FFM54_RS13820 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS13825 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS13830 PF00005 ABC transporter FFM54_RS13835 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFM54_RS13895 PF07694 5TMR of 5TMR-LYT FFM54_RS13895 PF06580 Histidine kinase FFM54_RS13900 PF00072 Response regulator receiver domain FFM54_RS13900 PF04397 LytTr DNA-binding domain FFM54_RS13910 PF00199 Catalase FFM54_RS13910 PF06628 Catalase-related immune-responsive FFM54_RS13920 PF13847 Methyltransferase domain FFM54_RS13920 PF10119 Predicted methyltransferase regulatory domain FFM54_RS13925 PF12833 Helix-turn-helix domain FFM54_RS13945 PF02801 Beta-ketoacyl synthase, C-terminal domain FFM54_RS13945 PF00109 Beta-ketoacyl synthase, N-terminal domain FFM54_RS13950 PF00550 Phosphopantetheine attachment site FFM54_RS13955 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS13960 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS13965 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal FFM54_RS13965 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal FFM54_RS13995 PF02080 TrkA-C domain FFM54_RS13995 PF00999 Sodium/hydrogen exchanger family FFM54_RS13995 PF02254 TrkA-N domain FFM54_RS14005 PF00109 Beta-ketoacyl synthase, N-terminal domain FFM54_RS14005 PF02801 Beta-ketoacyl synthase, C-terminal domain FFM54_RS14005 PF08659 KR domain FFM54_RS14005 PF16197 Ketoacyl-synthetase C-terminal extension FFM54_RS14005 PF00668 Condensation domain FFM54_RS14005 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS14005 PF00501 AMP-binding enzyme FFM54_RS14005 PF00550 Phosphopantetheine attachment site FFM54_RS14005 PF14765 Polyketide synthase dehydratase FFM54_RS14025 PF00109 Beta-ketoacyl synthase, N-terminal domain FFM54_RS14025 PF14765 Polyketide synthase dehydratase FFM54_RS14025 PF16197 Ketoacyl-synthetase C-terminal extension FFM54_RS14025 PF02801 Beta-ketoacyl synthase, C-terminal domain FFM54_RS14025 PF00550 Phosphopantetheine attachment site FFM54_RS14025 PF08659 KR domain FFM54_RS14030 PF01494 FAD binding domain FFM54_RS14035 PF07690 Major Facilitator Superfamily FFM54_RS14045 PF00654 Voltage gated chloride channel FFM54_RS14065 PF03466 LysR substrate binding domain FFM54_RS14065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS14075 PF01699 Sodium/calcium exchanger protein FFM54_RS14100 PF01557 Fumarylacetoacetate (FAA) hydrolase family FFM54_RS14120 PF08281 Sigma-70, region 4 FFM54_RS14120 PF04542 Sigma-70 region 2 FFM54_RS14130 PF04264 YceI-like domain FFM54_RS14150 PF08281 Sigma-70, region 4 FFM54_RS14150 PF04542 Sigma-70 region 2 FFM54_RS14160 PF07715 TonB-dependent Receptor Plug Domain FFM54_RS14165 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS14170 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS14210 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS14210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS14210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS14220 PF00083 Sugar (and other) transporter FFM54_RS14250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS14250 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS14250 PF00672 HAMP domain FFM54_RS14255 PF00072 Response regulator receiver domain FFM54_RS14255 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS14260 PF00873 AcrB/AcrD/AcrF family FFM54_RS14265 PF00529 HlyD membrane-fusion protein of T1SS FFM54_RS14265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFM54_RS14355 PF05840 Bacteriophage replication gene A protein (GPA) FFM54_RS14370 PF13614 AAA domain FFM54_RS14395 PF05973 Phage derived protein Gp49-like (DUF891) FFM54_RS14400 PF01381 Helix-turn-helix FFM54_RS14565 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FFM54_RS14565 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FFM54_RS14605 PF00012 Hsp70 protein FFM54_RS14610 PF00012 Hsp70 protein FFM54_RS14615 PF09587 Bacterial capsule synthesis protein PGA_cap FFM54_RS14670 PF01547 Bacterial extracellular solute-binding protein FFM54_RS14675 PF08543 Phosphomethylpyrimidine kinase FFM54_RS14700 PF00293 NUDIX domain FFM54_RS14725 PF13520 Amino acid permease FFM54_RS14740 PF17862 AAA+ lid domain FFM54_RS14740 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS14740 PF01434 Peptidase family M41 FFM54_RS14755 PF07969 Amidohydrolase family FFM54_RS14765 PF13533 Biotin-lipoyl like FFM54_RS14770 PF00873 AcrB/AcrD/AcrF family FFM54_RS14775 PF02321 Outer membrane efflux protein FFM54_RS14785 PF00925 GTP cyclohydrolase II FFM54_RS14800 PF03781 Sulfatase-modifying factor enzyme 1 FFM54_RS14800 PF12867 DinB superfamily FFM54_RS14820 PF07690 Major Facilitator Superfamily FFM54_RS14850 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FFM54_RS14850 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS14855 PF10400 Virulence activator alpha C-term FFM54_RS14855 PF03551 Transcriptional regulator PadR-like family FFM54_RS14860 PF02110 Hydroxyethylthiazole kinase family FFM54_RS14900 PF00582 Universal stress protein family FFM54_RS14910 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FFM54_RS14915 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FFM54_RS14920 PF00361 Proton-conducting membrane transporter FFM54_RS14930 PF00146 NADH dehydrogenase FFM54_RS14935 PF00361 Proton-conducting membrane transporter FFM54_RS14970 PF07690 Major Facilitator Superfamily FFM54_RS14975 PF09312 SurA N-terminal domain FFM54_RS14975 PF00639 PPIC-type PPIASE domain FFM54_RS14980 PF02665 Nitrate reductase gamma subunit FFM54_RS14985 PF02613 Nitrate reductase delta subunit FFM54_RS14990 PF14711 Respiratory nitrate reductase beta C-terminal FFM54_RS14990 PF13247 4Fe-4S dicluster domain FFM54_RS14995 PF00384 Molybdopterin oxidoreductase FFM54_RS14995 PF14710 Respiratory nitrate reductase alpha N-terminal FFM54_RS14995 PF01568 Molydopterin dinucleotide binding domain FFM54_RS15005 PF05231 MASE1 FFM54_RS15005 PF07730 Histidine kinase FFM54_RS15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS15010 PF00072 Response regulator receiver domain FFM54_RS15010 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS15020 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS15020 PF00072 Response regulator receiver domain FFM54_RS15025 PF00027 Cyclic nucleotide-binding domain FFM54_RS15025 PF13545 Crp-like helix-turn-helix domain FFM54_RS15050 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FFM54_RS15070 PF12706 Beta-lactamase superfamily domain FFM54_RS15070 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain FFM54_RS15080 PF00550 Phosphopantetheine attachment site FFM54_RS15080 PF00668 Condensation domain FFM54_RS15080 PF00501 AMP-binding enzyme FFM54_RS15080 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS15085 PF00109 Beta-ketoacyl synthase, N-terminal domain FFM54_RS15085 PF00698 Acyl transferase domain FFM54_RS15085 PF02801 Beta-ketoacyl synthase, C-terminal domain FFM54_RS15085 PF00550 Phosphopantetheine attachment site FFM54_RS15085 PF16197 Ketoacyl-synthetase C-terminal extension FFM54_RS15085 PF00668 Condensation domain FFM54_RS15090 PF16197 Ketoacyl-synthetase C-terminal extension FFM54_RS15090 PF00668 Condensation domain FFM54_RS15090 PF02801 Beta-ketoacyl synthase, C-terminal domain FFM54_RS15090 PF00550 Phosphopantetheine attachment site FFM54_RS15090 PF00698 Acyl transferase domain FFM54_RS15090 PF00109 Beta-ketoacyl synthase, N-terminal domain FFM54_RS15095 PF00668 Condensation domain FFM54_RS15095 PF00550 Phosphopantetheine attachment site FFM54_RS15095 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS15095 PF00501 AMP-binding enzyme FFM54_RS15095 PF00975 Thioesterase domain FFM54_RS15100 PF01432 Peptidase family M3 FFM54_RS15110 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS15110 PF03472 Autoinducer binding domain FFM54_RS15120 PF00999 Sodium/hydrogen exchanger family FFM54_RS15130 PF00765 Autoinducer synthase FFM54_RS15135 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS15135 PF00550 Phosphopantetheine attachment site FFM54_RS15135 PF00501 AMP-binding enzyme FFM54_RS15135 PF00668 Condensation domain FFM54_RS15180 PF14765 Polyketide synthase dehydratase FFM54_RS15180 PF00698 Acyl transferase domain FFM54_RS15180 PF00550 Phosphopantetheine attachment site FFM54_RS15180 PF08659 KR domain FFM54_RS15180 PF02801 Beta-ketoacyl synthase, C-terminal domain FFM54_RS15180 PF16197 Ketoacyl-synthetase C-terminal extension FFM54_RS15180 PF00109 Beta-ketoacyl synthase, N-terminal domain FFM54_RS15190 PF00296 Luciferase-like monooxygenase FFM54_RS15210 PF00550 Phosphopantetheine attachment site FFM54_RS15210 PF00668 Condensation domain FFM54_RS15210 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS15210 PF00501 AMP-binding enzyme FFM54_RS15210 PF00975 Thioesterase domain FFM54_RS15215 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FFM54_RS15250 PF02627 Carboxymuconolactone decarboxylase family FFM54_RS15270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FFM54_RS15270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FFM54_RS15280 PF07715 TonB-dependent Receptor Plug Domain FFM54_RS15280 PF00593 TonB dependent receptor FFM54_RS15290 PF13640 2OG-Fe(II) oxygenase superfamily FFM54_RS15290 PF18331 PKHD-type hydroxylase C-terminal domain FFM54_RS15330 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS15330 PF13296 Putative type VI secretion system Rhs element Vgr FFM54_RS15330 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FFM54_RS15345 PF07690 Major Facilitator Superfamily FFM54_RS15350 PF02581 Thiamine monophosphate synthase FFM54_RS15365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS15365 PF17200 Single Cache domain 2 FFM54_RS15365 PF00672 HAMP domain FFM54_RS15375 PF00905 Penicillin binding protein transpeptidase domain FFM54_RS15375 PF03717 Penicillin-binding Protein dimerisation domain FFM54_RS15385 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FFM54_RS15395 PF00999 Sodium/hydrogen exchanger family FFM54_RS15395 PF02254 TrkA-N domain FFM54_RS15450 PF08220 DeoR-like helix-turn-helix domain FFM54_RS15450 PF00455 DeoR C terminal sensor domain FFM54_RS15455 PF07690 Major Facilitator Superfamily FFM54_RS15485 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS15490 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS15495 PF00107 Zinc-binding dehydrogenase FFM54_RS15495 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS15500 PF00005 ABC transporter FFM54_RS15500 PF08402 TOBE domain FFM54_RS15510 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFM54_RS15510 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFM54_RS15520 PF00768 D-alanyl-D-alanine carboxypeptidase FFM54_RS15520 PF07943 Penicillin-binding protein 5, C-terminal domain FFM54_RS15525 PF00905 Penicillin binding protein transpeptidase domain FFM54_RS15525 PF03717 Penicillin-binding Protein dimerisation domain FFM54_RS15540 PF13806 Rieske-like [2Fe-2S] domain FFM54_RS15545 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS15545 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FFM54_RS15545 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FFM54_RS15545 PF04324 BFD-like [2Fe-2S] binding domain FFM54_RS15545 PF18267 Rubredoxin NAD+ reductase C-terminal domain FFM54_RS15575 PF00775 Dioxygenase FFM54_RS15575 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FFM54_RS15580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS15580 PF03466 LysR substrate binding domain FFM54_RS15595 PF00563 EAL domain FFM54_RS15595 PF01590 GAF domain FFM54_RS15595 PF00360 Phytochrome region FFM54_RS15595 PF00990 Diguanylate cyclase, GGDEF domain FFM54_RS15605 PF01596 O-methyltransferase FFM54_RS15610 PF00793 DAHP synthetase I family FFM54_RS15670 PF02321 Outer membrane efflux protein FFM54_RS15685 PF03412 Peptidase C39 family FFM54_RS15685 PF00005 ABC transporter FFM54_RS15685 PF00664 ABC transporter transmembrane region FFM54_RS15710 PF03976 Polyphosphate kinase 2 (PPK2) FFM54_RS15725 PF00585 C-terminal regulatory domain of Threonine dehydratase FFM54_RS15725 PF00291 Pyridoxal-phosphate dependent enzyme FFM54_RS15735 PF01593 Flavin containing amine oxidoreductase FFM54_RS15755 PF01205 Uncharacterized protein family UPF0029 FFM54_RS15755 PF09186 Domain of unknown function (DUF1949) FFM54_RS15770 PF08281 Sigma-70, region 4 FFM54_RS15770 PF04542 Sigma-70 region 2 FFM54_RS15785 PF00501 AMP-binding enzyme FFM54_RS15810 PF00501 AMP-binding enzyme FFM54_RS15810 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS15810 PF00668 Condensation domain FFM54_RS15810 PF07993 Male sterility protein FFM54_RS15810 PF00550 Phosphopantetheine attachment site FFM54_RS15815 PF07690 Major Facilitator Superfamily FFM54_RS15820 PF03621 MbtH-like protein FFM54_RS15825 PF00550 Phosphopantetheine attachment site FFM54_RS15825 PF00975 Thioesterase domain FFM54_RS15825 PF00501 AMP-binding enzyme FFM54_RS15825 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS15825 PF00668 Condensation domain FFM54_RS15895 PF12795 Mechanosensitive ion channel porin domain FFM54_RS15895 PF00924 Mechanosensitive ion channel FFM54_RS15895 PF12794 Mechanosensitive ion channel inner membrane domain 1 FFM54_RS15900 PF01189 16S rRNA methyltransferase RsmB/F FFM54_RS15900 PF01029 NusB family FFM54_RS15905 PF00551 Formyl transferase FFM54_RS15910 PF06574 FAD synthetase FFM54_RS15910 PF01687 Riboflavin kinase FFM54_RS15915 PF08264 Anticodon-binding domain of tRNA FFM54_RS15915 PF06827 Zinc finger found in FPG and IleRS FFM54_RS15915 PF00133 tRNA synthetases class I (I, L, M and V) FFM54_RS15920 PF01252 Signal peptidase (SPase) II FFM54_RS15925 PF04127 DNA / pantothenate metabolism flavoprotein FFM54_RS15925 PF02441 Flavoprotein FFM54_RS15930 PF00692 dUTPase FFM54_RS15945 PF00324 Amino acid permease FFM54_RS15950 PF02861 Clp amino terminal domain, pathogenicity island component FFM54_RS15950 PF17871 AAA lid domain FFM54_RS15950 PF10431 C-terminal, D2-small domain, of ClpB protein FFM54_RS15950 PF07724 AAA domain (Cdc48 subfamily) FFM54_RS15950 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS15955 PF02617 ATP-dependent Clp protease adaptor protein ClpS FFM54_RS15960 PF00313 'Cold-shock' DNA-binding domain FFM54_RS15965 PF07732 Multicopper oxidase FFM54_RS15965 PF07731 Multicopper oxidase FFM54_RS15975 PF00180 Isocitrate/isopropylmalate dehydrogenase FFM54_RS15980 PF00849 RNA pseudouridylate synthase FFM54_RS15995 PF00679 Elongation factor G C-terminus FFM54_RS15995 PF03764 Elongation factor G, domain IV FFM54_RS15995 PF14492 Elongation Factor G, domain II FFM54_RS15995 PF03144 Elongation factor Tu domain 2 FFM54_RS15995 PF00009 Elongation factor Tu GTP binding domain FFM54_RS16030 PF00248 Aldo/keto reductase family FFM54_RS16035 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS16035 PF07702 UTRA domain FFM54_RS16055 PF07690 Major Facilitator Superfamily FFM54_RS16120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FFM54_RS16120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FFM54_RS16135 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FFM54_RS16140 PF03966 Trm112p-like protein FFM54_RS16145 PF02348 Cytidylyltransferase FFM54_RS16155 PF05191 Adenylate kinase, active site lid FFM54_RS16170 PF00106 short chain dehydrogenase FFM54_RS16180 PF13369 Transglutaminase-like superfamily FFM54_RS16185 PF03023 Lipid II flippase MurJ FFM54_RS16195 PF01649 Ribosomal protein S20 FFM54_RS16205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FFM54_RS16205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FFM54_RS16210 PF01565 FAD binding domain FFM54_RS16210 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FFM54_RS16215 PF04461 Protein of unknown function (DUF520) FFM54_RS16220 PF02660 Glycerol-3-phosphate acyltransferase FFM54_RS16225 PF04073 Aminoacyl-tRNA editing domain FFM54_RS16230 PF00501 AMP-binding enzyme FFM54_RS16230 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS16235 PF00589 Phage integrase family FFM54_RS16235 PF02899 Phage integrase, N-terminal SAM-like domain FFM54_RS16245 PF08331 Domain of unknown function (DUF1730) FFM54_RS16250 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FFM54_RS16255 PF01520 N-acetylmuramoyl-L-alanine amidase FFM54_RS16255 PF11741 AMIN domain FFM54_RS16260 PF00892 EamA-like transporter family FFM54_RS16265 PF05726 Pirin C-terminal cupin domain FFM54_RS16265 PF02678 Pirin FFM54_RS16270 PF00085 Thioredoxin FFM54_RS16280 PF00899 ThiF family FFM54_RS16285 PF01243 Pyridoxamine 5'-phosphate oxidase FFM54_RS16285 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FFM54_RS16300 PF01625 Peptide methionine sulfoxide reductase FFM54_RS16310 PF01613 Flavin reductase like domain FFM54_RS16315 PF01037 Lrp/AsnC ligand binding domain FFM54_RS16320 PF04199 Putative cyclase FFM54_RS16325 PF00266 Aminotransferase class-V FFM54_RS16330 PF03301 Tryptophan 2,3-dioxygenase FFM54_RS16335 PF07690 Major Facilitator Superfamily FFM54_RS16345 PF02558 Ketopantoate reductase PanE/ApbA FFM54_RS16345 PF08546 Ketopantoate reductase PanE/ApbA C terminal FFM54_RS16350 PF00171 Aldehyde dehydrogenase family FFM54_RS16360 PF03466 LysR substrate binding domain FFM54_RS16360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS16365 PF08125 Mannitol dehydrogenase C-terminal domain FFM54_RS16365 PF01232 Mannitol dehydrogenase Rossmann domain FFM54_RS16375 PF04198 Putative sugar-binding domain FFM54_RS16380 PF07690 Major Facilitator Superfamily FFM54_RS16385 PF00144 Beta-lactamase FFM54_RS16390 PF03466 LysR substrate binding domain FFM54_RS16390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS16405 PF00005 ABC transporter FFM54_RS16405 PF08402 TOBE domain FFM54_RS16410 PF13419 Haloacid dehalogenase-like hydrolase FFM54_RS16415 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS16420 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS16430 PF08013 Tagatose 6 phosphate kinase FFM54_RS16435 PF00294 pfkB family carbohydrate kinase FFM54_RS16445 PF01475 Ferric uptake regulator family FFM54_RS16455 PF00005 ABC transporter FFM54_RS16460 PF00950 ABC 3 transport family FFM54_RS16465 PF00756 Putative esterase FFM54_RS16470 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS16470 PF00107 Zinc-binding dehydrogenase FFM54_RS16475 PF01965 DJ-1/PfpI family FFM54_RS16475 PF12833 Helix-turn-helix domain FFM54_RS16485 PF00860 Permease family FFM54_RS16510 PF00873 AcrB/AcrD/AcrF family FFM54_RS16515 PF00529 HlyD membrane-fusion protein of T1SS FFM54_RS16515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFM54_RS16525 PF08361 MAATS-type transcriptional repressor, C-terminal region FFM54_RS16525 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS16545 PF13180 PDZ domain FFM54_RS16555 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS16555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS16560 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS16560 PF00072 Response regulator receiver domain FFM54_RS16570 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FFM54_RS16580 PF04116 Fatty acid hydroxylase superfamily FFM54_RS16590 PF03481 Putative GTP-binding controlling metal-binding FFM54_RS16590 PF01300 Telomere recombination FFM54_RS16595 PF02222 ATP-grasp domain FFM54_RS16595 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FFM54_RS16600 PF00731 AIR carboxylase FFM54_RS16605 PF01259 SAICAR synthetase FFM54_RS16610 PF01116 Fructose-bisphosphate aldolase class-II FFM54_RS16615 PF00224 Pyruvate kinase, barrel domain FFM54_RS16615 PF02887 Pyruvate kinase, alpha/beta domain FFM54_RS16625 PF00162 Phosphoglycerate kinase FFM54_RS16640 PF01063 Amino-transferase class IV FFM54_RS16650 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FFM54_RS16660 PF00561 alpha/beta hydrolase fold FFM54_RS16675 PF01967 MoaC family FFM54_RS16700 PF11846 Virulence factor membrane-bound polymerase, C-terminal FFM54_RS16700 PF15864 Protein glycosylation ligase FFM54_RS16700 PF04932 O-Antigen ligase FFM54_RS16705 PF00114 Pilin (bacterial filament) FFM54_RS16705 PF07963 Prokaryotic N-terminal methylation motif FFM54_RS16710 PF03741 Integral membrane protein TerC family FFM54_RS16715 PF02629 CoA binding domain FFM54_RS16715 PF00549 CoA-ligase FFM54_RS16720 PF00549 CoA-ligase FFM54_RS16720 PF08442 ATP-grasp domain FFM54_RS16730 PF02631 RecX family FFM54_RS16735 PF00154 recA bacterial DNA recombination protein FFM54_RS16740 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS16740 PF00072 Response regulator receiver domain FFM54_RS16745 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS16745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS16750 PF00083 Sugar (and other) transporter FFM54_RS16750 PF08946 Osmosensory transporter coiled coil FFM54_RS16810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS16810 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS16810 PF09308 LuxQ, periplasmic FFM54_RS16810 PF00072 Response regulator receiver domain FFM54_RS16815 PF03466 LysR substrate binding domain FFM54_RS16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS16835 PF05199 GMC oxidoreductase FFM54_RS16835 PF00732 GMC oxidoreductase FFM54_RS16850 PF13378 Enolase C-terminal domain-like FFM54_RS16850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FFM54_RS16855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFM54_RS16855 PF00205 Thiamine pyrophosphate enzyme, central domain FFM54_RS16855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFM54_RS16865 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFM54_RS16875 PF00034 Cytochrome c FFM54_RS16875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FFM54_RS16890 PF05139 Erythromycin esterase FFM54_RS16890 PF00156 Phosphoribosyl transferase domain FFM54_RS16900 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FFM54_RS16900 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FFM54_RS16905 PF00156 Phosphoribosyl transferase domain FFM54_RS16905 PF01738 Dienelactone hydrolase family FFM54_RS16910 PF00156 Phosphoribosyl transferase domain FFM54_RS16910 PF05139 Erythromycin esterase FFM54_RS16930 PF00005 ABC transporter FFM54_RS16950 PF00581 Rhodanese-like domain FFM54_RS16955 PF03466 LysR substrate binding domain FFM54_RS16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS16960 PF00375 Sodium:dicarboxylate symporter family FFM54_RS16975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS16975 PF08447 PAS fold FFM54_RS16995 PF00072 Response regulator receiver domain FFM54_RS17000 PF03707 Bacterial signalling protein N terminal repeat FFM54_RS17000 PF00990 Diguanylate cyclase, GGDEF domain FFM54_RS17000 PF00563 EAL domain FFM54_RS17005 PF16656 Purple acid Phosphatase, N-terminal domain FFM54_RS17005 PF00149 Calcineurin-like phosphoesterase FFM54_RS17025 PF13378 Enolase C-terminal domain-like FFM54_RS17025 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FFM54_RS17050 PF00034 Cytochrome c FFM54_RS17050 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FFM54_RS17075 PF00455 DeoR C terminal sensor domain FFM54_RS17075 PF08220 DeoR-like helix-turn-helix domain FFM54_RS17095 PF01266 FAD dependent oxidoreductase FFM54_RS17095 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FFM54_RS17100 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FFM54_RS17100 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FFM54_RS17105 PF00230 Major intrinsic protein FFM54_RS17120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFM54_RS17125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFM54_RS17130 PF13537 Glutamine amidotransferase domain FFM54_RS17130 PF00733 Asparagine synthase FFM54_RS17135 PF02655 ATP-grasp domain FFM54_RS17135 PF00206 Lyase FFM54_RS17145 PF13419 Haloacid dehalogenase-like hydrolase FFM54_RS17150 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FFM54_RS17155 PF01381 Helix-turn-helix FFM54_RS17155 PF07883 Cupin domain FFM54_RS17160 PF07690 Major Facilitator Superfamily FFM54_RS17165 PF03466 LysR substrate binding domain FFM54_RS17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS17175 PF01938 TRAM domain FFM54_RS17175 PF04055 Radical SAM superfamily FFM54_RS17175 PF00919 Uncharacterized protein family UPF0004 FFM54_RS17180 PF02562 PhoH-like protein FFM54_RS17190 PF02130 Uncharacterized protein family UPF0054 FFM54_RS17195 PF04752 ChaC-like protein FFM54_RS17200 PF00571 CBS domain FFM54_RS17200 PF03471 Transporter associated domain FFM54_RS17210 PF02091 Glycyl-tRNA synthetase alpha subunit FFM54_RS17215 PF05746 DALR anticodon binding domain FFM54_RS17215 PF02092 Glycyl-tRNA synthetase beta subunit FFM54_RS17225 PF01553 Acyltransferase FFM54_RS17240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFM54_RS17255 PF00398 Ribosomal RNA adenine dimethylase FFM54_RS17260 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FFM54_RS17265 PF00639 PPIC-type PPIASE domain FFM54_RS17265 PF09312 SurA N-terminal domain FFM54_RS17270 PF04453 LPS transport system D FFM54_RS17275 PF01636 Phosphotransferase enzyme family FFM54_RS17280 PF00483 Nucleotidyl transferase FFM54_RS17290 PF00664 ABC transporter transmembrane region FFM54_RS17290 PF00005 ABC transporter FFM54_RS17300 PF03061 Thioesterase superfamily FFM54_RS17310 PF02634 FdhD/NarQ family FFM54_RS17315 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS17320 PF00108 Thiolase, N-terminal domain FFM54_RS17320 PF02803 Thiolase, C-terminal domain FFM54_RS17325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FFM54_RS17325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FFM54_RS17325 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS17330 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS17330 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS17330 PF12806 Acetyl-CoA dehydrogenase C-terminal like FFM54_RS17330 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS17340 PF13091 PLD-like domain FFM54_RS17345 PF00293 NUDIX domain FFM54_RS17360 PF02938 GAD domain FFM54_RS17360 PF00152 tRNA synthetases class II (D, K and N) FFM54_RS17360 PF01336 OB-fold nucleic acid binding domain FFM54_RS17380 PF03109 ABC1 family FFM54_RS17395 PF01209 ubiE/COQ5 methyltransferase family FFM54_RS17425 PF00585 C-terminal regulatory domain of Threonine dehydratase FFM54_RS17425 PF00291 Pyridoxal-phosphate dependent enzyme FFM54_RS17430 PF14489 QueF-like protein FFM54_RS17430 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FFM54_RS17440 PF01042 Endoribonuclease L-PSP FFM54_RS17445 PF07969 Amidohydrolase family FFM54_RS17450 PF01418 Helix-turn-helix domain, rpiR family FFM54_RS17450 PF01380 SIS domain FFM54_RS17470 PF07690 Major Facilitator Superfamily FFM54_RS17480 PF07859 alpha/beta hydrolase fold FFM54_RS17510 PF13439 Glycosyltransferase Family 4 FFM54_RS17510 PF00534 Glycosyl transferases group 1 FFM54_RS17515 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FFM54_RS17515 PF10531 SLBB domain FFM54_RS17515 PF02563 Polysaccharide biosynthesis/export protein FFM54_RS17520 PF02397 Bacterial sugar transferase FFM54_RS17540 PF00550 Phosphopantetheine attachment site FFM54_RS17570 PF00158 Sigma-54 interaction domain FFM54_RS17570 PF02954 Bacterial regulatory protein, Fis family FFM54_RS17570 PF00072 Response regulator receiver domain FFM54_RS17585 PF13439 Glycosyltransferase Family 4 FFM54_RS17585 PF00534 Glycosyl transferases group 1 FFM54_RS17605 PF08323 Starch synthase catalytic domain FFM54_RS17605 PF00534 Glycosyl transferases group 1 FFM54_RS17630 PF00596 Class II Aldolase and Adducin N-terminal domain FFM54_RS17650 PF00069 Protein kinase domain FFM54_RS17745 PF07690 Major Facilitator Superfamily FFM54_RS17750 PF17755 UvrA DNA-binding domain FFM54_RS17750 PF17760 UvrA interaction domain FFM54_RS17770 PF00551 Formyl transferase FFM54_RS17780 PF01810 LysE type translocator FFM54_RS17790 PF00156 Phosphoribosyl transferase domain FFM54_RS17795 PF02080 TrkA-C domain FFM54_RS17795 PF00999 Sodium/hydrogen exchanger family FFM54_RS17795 PF02254 TrkA-N domain FFM54_RS17800 PF00571 CBS domain FFM54_RS17800 PF01380 SIS domain FFM54_RS17820 PF00005 ABC transporter FFM54_RS17820 PF12399 Branched-chain amino acid ATP-binding cassette transporter FFM54_RS17825 PF04963 Sigma-54 factor, core binding domain FFM54_RS17825 PF00309 Sigma-54 factor, Activator interacting domain (AID) FFM54_RS17825 PF04552 Sigma-54, DNA binding domain FFM54_RS17835 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FFM54_RS17840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FFM54_RS17845 PF07475 HPr Serine kinase C-terminal domain FFM54_RS17845 PF02603 HPr Serine kinase N terminus FFM54_RS17850 PF03668 P-loop ATPase protein family FFM54_RS17860 PF00730 HhH-GPD superfamily base excision DNA repair protein FFM54_RS17860 PF10576 Iron-sulfur binding domain of endonuclease III FFM54_RS17860 PF00633 Helix-hairpin-helix motif FFM54_RS17860 PF14815 NUDIX domain FFM54_RS17865 PF06827 Zinc finger found in FPG and IleRS FFM54_RS17865 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FFM54_RS17865 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FFM54_RS17875 PF03550 Outer membrane lipoprotein LolB FFM54_RS17880 PF00288 GHMP kinases N terminal domain FFM54_RS17880 PF08544 GHMP kinases C terminal FFM54_RS17890 PF14572 Phosphoribosyl synthetase-associated domain FFM54_RS17890 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FFM54_RS17915 PF01195 Peptidyl-tRNA hydrolase FFM54_RS17920 PF00155 Aminotransferase class I and II FFM54_RS17925 PF00037 4Fe-4S binding domain FFM54_RS17930 PF01467 Cytidylyltransferase-like FFM54_RS17950 PF02798 Glutathione S-transferase, N-terminal domain FFM54_RS17950 PF14497 Glutathione S-transferase, C-terminal domain FFM54_RS17960 PF04324 BFD-like [2Fe-2S] binding domain FFM54_RS17960 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS17960 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FFM54_RS17960 PF18267 Rubredoxin NAD+ reductase C-terminal domain FFM54_RS17960 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FFM54_RS17965 PF00355 Rieske [2Fe-2S] domain FFM54_RS17970 PF01568 Molydopterin dinucleotide binding domain FFM54_RS17970 PF00384 Molybdopterin oxidoreductase FFM54_RS17970 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFM54_RS17975 PF02885 Glycosyl transferase family, helical bundle domain FFM54_RS17990 PF08502 LeuA allosteric (dimerisation) domain FFM54_RS17990 PF00682 HMGL-like FFM54_RS18000 PF09411 Lipid A 3-O-deacylase (PagL) FFM54_RS18010 PF04542 Sigma-70 region 2 FFM54_RS18010 PF04545 Sigma-70, region 4 FFM54_RS18010 PF00140 Sigma-70 factor, region 1.2 FFM54_RS18020 PF01654 Cytochrome bd terminal oxidase subunit I FFM54_RS18025 PF02322 Cytochrome bd terminal oxidase subunit II FFM54_RS18030 PF08173 Membrane bound YbgT-like protein FFM54_RS18060 PF01380 SIS domain FFM54_RS18065 PF01979 Amidohydrolase family FFM54_RS18070 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS18070 PF07702 UTRA domain FFM54_RS18080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS18080 PF03466 LysR substrate binding domain FFM54_RS18085 PF00501 AMP-binding enzyme FFM54_RS18135 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS18135 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS18135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS18135 PF12806 Acetyl-CoA dehydrogenase C-terminal like FFM54_RS18145 PF13649 Methyltransferase domain FFM54_RS18155 PF12857 TOBE-like domain FFM54_RS18155 PF00005 ABC transporter FFM54_RS18170 PF00202 Aminotransferase class-III FFM54_RS18180 PF07690 Major Facilitator Superfamily FFM54_RS18195 PF14579 Helix-hairpin-helix motif FFM54_RS18195 PF02811 PHP domain FFM54_RS18195 PF07733 Bacterial DNA polymerase III alpha NTPase domain FFM54_RS18195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FFM54_RS18205 PF03846 Cell division inhibitor SulA FFM54_RS18210 PF00005 ABC transporter FFM54_RS18230 PF03180 NLPA lipoprotein FFM54_RS18240 PF00672 HAMP domain FFM54_RS18240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS18240 PF02203 Tar ligand binding domain homologue FFM54_RS18255 PF02630 SCO1/SenC FFM54_RS18260 PF01040 UbiA prenyltransferase family FFM54_RS18265 PF02628 Cytochrome oxidase assembly protein FFM54_RS18285 PF00510 Cytochrome c oxidase subunit III FFM54_RS18295 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FFM54_RS18305 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFM54_RS18310 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FFM54_RS18310 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FFM54_RS18320 PF08241 Methyltransferase domain FFM54_RS18325 PF00156 Phosphoribosyl transferase domain FFM54_RS18330 PF00588 SpoU rRNA Methylase family FFM54_RS18340 PF01661 Macro domain FFM54_RS18345 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FFM54_RS18345 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FFM54_RS18350 PF02556 Preprotein translocase subunit SecB FFM54_RS18355 PF00462 Glutaredoxin FFM54_RS18360 PF00581 Rhodanese-like domain FFM54_RS18365 PF00300 Histidine phosphatase superfamily (branch 1) FFM54_RS18370 PF03572 Peptidase family S41 FFM54_RS18370 PF13180 PDZ domain FFM54_RS18375 PF00899 ThiF family FFM54_RS18385 PF05524 PEP-utilising enzyme, N-terminal FFM54_RS18385 PF00391 PEP-utilising enzyme, mobile domain FFM54_RS18385 PF02896 PEP-utilising enzyme, TIM barrel domain FFM54_RS18390 PF00381 PTS HPr component phosphorylation site FFM54_RS18400 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FFM54_RS18400 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FFM54_RS18410 PF00909 Ammonium Transporter Family FFM54_RS18415 PF00543 Nitrogen regulatory protein P-II FFM54_RS18420 PF04380 Membrane fusogenic activity FFM54_RS18425 PF01078 Magnesium chelatase, subunit ChlI FFM54_RS18425 PF13335 Magnesium chelatase, subunit ChlI C-terminal FFM54_RS18445 PF00501 AMP-binding enzyme FFM54_RS18445 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS18445 PF00668 Condensation domain FFM54_RS18445 PF00975 Thioesterase domain FFM54_RS18445 PF00550 Phosphopantetheine attachment site FFM54_RS18460 PF00578 AhpC/TSA family FFM54_RS18465 PF02954 Bacterial regulatory protein, Fis family FFM54_RS18465 PF00072 Response regulator receiver domain FFM54_RS18465 PF00158 Sigma-54 interaction domain FFM54_RS18470 PF02743 Cache domain FFM54_RS18470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS18470 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS18475 PF00375 Sodium:dicarboxylate symporter family FFM54_RS18485 PF00474 Sodium:solute symporter family FFM54_RS18500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS18500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS18500 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS18505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS18505 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS18505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS18510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FFM54_RS18510 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS18510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FFM54_RS18515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS18515 PF03466 LysR substrate binding domain FFM54_RS18535 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FFM54_RS18535 PF04055 Radical SAM superfamily FFM54_RS18540 PF03099 Biotin/lipoate A/B protein ligase family FFM54_RS18550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS18550 PF03466 LysR substrate binding domain FFM54_RS18555 PF04359 Protein of unknown function (DUF493) FFM54_RS18560 PF01063 Amino-transferase class IV FFM54_RS18565 PF00768 D-alanyl-D-alanine carboxypeptidase FFM54_RS18565 PF07943 Penicillin-binding protein 5, C-terminal domain FFM54_RS18600 PF00005 ABC transporter FFM54_RS18605 PF02405 Permease MlaE FFM54_RS18610 PF00149 Calcineurin-like phosphoesterase FFM54_RS18610 PF02872 5'-nucleotidase, C-terminal domain FFM54_RS18625 PF03309 Type III pantothenate kinase FFM54_RS18635 PF01467 Cytidylyltransferase-like FFM54_RS18660 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS18690 PF12091 Protein of unknown function (DUF3567) FFM54_RS18695 PF02607 B12 binding domain FFM54_RS18695 PF02310 B12 binding domain FFM54_RS18695 PF02965 Vitamin B12 dependent methionine synthase, activation domain FFM54_RS18695 PF02574 Homocysteine S-methyltransferase FFM54_RS18695 PF00809 Pterin binding enzyme FFM54_RS18700 PF02607 B12 binding domain FFM54_RS18700 PF02965 Vitamin B12 dependent methionine synthase, activation domain FFM54_RS18700 PF00809 Pterin binding enzyme FFM54_RS18700 PF02310 B12 binding domain FFM54_RS18700 PF02574 Homocysteine S-methyltransferase FFM54_RS18710 PF05746 DALR anticodon binding domain FFM54_RS18710 PF03485 Arginyl tRNA synthetase N terminal domain FFM54_RS18710 PF00750 tRNA synthetases class I (R) FFM54_RS18720 PF13462 Thioredoxin FFM54_RS18725 PF00106 short chain dehydrogenase FFM54_RS18745 PF00108 Thiolase, N-terminal domain FFM54_RS18745 PF02803 Thiolase, C-terminal domain FFM54_RS18750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFM54_RS18755 PF12848 ABC transporter FFM54_RS18755 PF16326 ABC transporter C-terminal domain FFM54_RS18755 PF00005 ABC transporter FFM54_RS18770 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FFM54_RS18775 PF00484 Carbonic anhydrase FFM54_RS18780 PF00108 Thiolase, N-terminal domain FFM54_RS18780 PF02803 Thiolase, C-terminal domain FFM54_RS18800 PF00202 Aminotransferase class-III FFM54_RS18805 PF00155 Aminotransferase class I and II FFM54_RS18815 PF06968 Biotin and Thiamin Synthesis associated domain FFM54_RS18815 PF04055 Radical SAM superfamily FFM54_RS18820 PF03932 CutC family FFM54_RS18835 PF00245 Alkaline phosphatase FFM54_RS18840 PF00245 Alkaline phosphatase FFM54_RS18855 PF05231 MASE1 FFM54_RS18855 PF00563 EAL domain FFM54_RS18860 PF00999 Sodium/hydrogen exchanger family FFM54_RS18875 PF07885 Ion channel FFM54_RS18875 PF17655 Inward rectifier potassium channel C-terminal domain FFM54_RS18980 PF07929 Plasmid pRiA4b ORF-3-like protein FFM54_RS18985 PF13817 IS66 C-terminal element FFM54_RS18985 PF13005 zinc-finger binding domain of transposase IS66 FFM54_RS18985 PF03050 Transposase IS66 family FFM54_RS18985 PF13007 Transposase C of IS166 homeodomain FFM54_RS18990 PF05717 IS66 Orf2 like protein FFM54_RS19000 PF13276 HTH-like domain FFM54_RS19000 PF13683 Integrase core domain FFM54_RS19020 PF12102 Domain of unknown function (DUF3578) FFM54_RS19020 PF07728 AAA domain (dynein-related subfamily) FFM54_RS19030 PF18766 SWI2/SNF2 ATPase FFM54_RS19030 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FFM54_RS19030 PF11867 Domain of unknown function (DUF3387) FFM54_RS19035 PF01420 Type I restriction modification DNA specificity domain FFM54_RS19040 PF12161 HsdM N-terminal domain FFM54_RS19040 PF02384 N-6 DNA Methylase FFM54_RS19065 PF00589 Phage integrase family FFM54_RS19065 PF13356 Arm DNA-binding domain FFM54_RS19070 PF00701 Dihydrodipicolinate synthetase family FFM54_RS19090 PF02630 SCO1/SenC FFM54_RS19115 PF01037 Lrp/AsnC ligand binding domain FFM54_RS19125 PF04185 Phosphoesterase family FFM54_RS19125 PF05506 Domain of unknown function (DUF756) FFM54_RS19145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFM54_RS19150 PF00682 HMGL-like FFM54_RS19170 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FFM54_RS19170 PF13542 Helix-turn-helix domain of transposase family ISL3 FFM54_RS19170 PF01610 Transposase FFM54_RS19180 PF01037 Lrp/AsnC ligand binding domain FFM54_RS19180 PF13404 AsnC-type helix-turn-helix domain FFM54_RS19185 PF00561 alpha/beta hydrolase fold FFM54_RS19200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS19200 PF03466 LysR substrate binding domain FFM54_RS19205 PF13609 Gram-negative porin FFM54_RS19215 PF13593 SBF-like CPA transporter family (DUF4137) FFM54_RS19230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS19230 PF00672 HAMP domain FFM54_RS19230 PF02203 Tar ligand binding domain homologue FFM54_RS19235 PF00356 Bacterial regulatory proteins, lacI family FFM54_RS19275 PF01171 PP-loop family FFM54_RS19290 PF00132 Bacterial transferase hexapeptide (six repeats) FFM54_RS19290 PF12804 MobA-like NTP transferase domain FFM54_RS19295 PF01380 SIS domain FFM54_RS19315 PF00873 AcrB/AcrD/AcrF family FFM54_RS19320 PF00529 HlyD membrane-fusion protein of T1SS FFM54_RS19320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFM54_RS19340 PF04536 TPM domain FFM54_RS19345 PF04011 LemA family FFM54_RS19355 PF04945 YHS domain FFM54_RS19385 PF00764 Arginosuccinate synthase FFM54_RS19395 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS19395 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFM54_RS19470 PF13609 Gram-negative porin FFM54_RS19490 PF08274 PhnA Zinc-Ribbon FFM54_RS19490 PF03831 PhnA domain FFM54_RS19520 PF03466 LysR substrate binding domain FFM54_RS19520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS19530 PF00860 Permease family FFM54_RS19540 PF00669 Bacterial flagellin N-terminal helical region FFM54_RS19545 PF00460 Flagella basal body rod protein FFM54_RS19545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFM54_RS19550 PF07317 Flagellar regulator YcgR FFM54_RS19550 PF07238 PilZ domain FFM54_RS19555 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FFM54_RS19555 PF10135 Rod binding protein FFM54_RS19560 PF02119 Flagellar P-ring protein FFM54_RS19570 PF00460 Flagella basal body rod protein FFM54_RS19570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFM54_RS19575 PF00460 Flagella basal body rod protein FFM54_RS19575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFM54_RS19580 PF07559 Flagellar basal body protein FlaE FFM54_RS19580 PF00460 Flagella basal body rod protein FFM54_RS19580 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFM54_RS19585 PF13860 FlgD Ig-like domain FFM54_RS19585 PF13861 FlgD Tudor-like domain FFM54_RS19585 PF03963 Flagellar hook capping protein - N-terminal region FFM54_RS19590 PF00460 Flagella basal body rod protein FFM54_RS19590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FFM54_RS19595 PF00460 Flagella basal body rod protein FFM54_RS19610 PF04316 Anti-sigma-28 factor, FlgM FFM54_RS19640 PF01966 HD domain FFM54_RS19640 PF12627 Probable RNA and SrmB- binding site of polymerase A FFM54_RS19640 PF01743 Poly A polymerase head domain FFM54_RS19655 PF14718 Soluble lytic murein transglycosylase L domain FFM54_RS19655 PF01464 Transglycosylase SLT domain FFM54_RS19660 PF01812 5-formyltetrahydrofolate cyclo-ligase family FFM54_RS19670 PF02682 Carboxyltransferase domain, subdomain C and D FFM54_RS19675 PF02626 Carboxyltransferase domain, subdomain A and B FFM54_RS19680 PF03746 LamB/YcsF family FFM54_RS19705 PF00005 ABC transporter FFM54_RS19705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFM54_RS19710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FFM54_RS19710 PF00005 ABC transporter FFM54_RS19715 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS19715 PF12911 N-terminal TM domain of oligopeptide transport permease C FFM54_RS19720 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS19725 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FFM54_RS19735 PF07690 Major Facilitator Superfamily FFM54_RS19740 PF01355 High potential iron-sulfur protein FFM54_RS19745 PF01266 FAD dependent oxidoreductase FFM54_RS19750 PF05362 Lon protease (S16) C-terminal proteolytic domain FFM54_RS19750 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS19765 PF03372 Endonuclease/Exonuclease/phosphatase family FFM54_RS19770 PF01810 LysE type translocator FFM54_RS19775 PF00970 Oxidoreductase FAD-binding domain FFM54_RS19775 PF00175 Oxidoreductase NAD-binding domain FFM54_RS19785 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS19785 PF00072 Response regulator receiver domain FFM54_RS19790 PF13520 Amino acid permease FFM54_RS19805 PF01312 FlhB HrpN YscU SpaS Family FFM54_RS19820 PF02561 Flagellar protein FliS FFM54_RS19825 PF02049 Flagellar hook-basal body complex protein FliE FFM54_RS19830 PF08345 Flagellar M-ring protein C-terminal FFM54_RS19830 PF01514 Secretory protein of YscJ/FliF family FFM54_RS19835 PF01706 FliG C-terminal domain FFM54_RS19835 PF14841 FliG middle domain FFM54_RS19835 PF14842 FliG N-terminal domain FFM54_RS19845 PF18269 T3SS EscN ATPase C-terminal domain FFM54_RS19845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFM54_RS19860 PF05199 GMC oxidoreductase FFM54_RS19860 PF00732 GMC oxidoreductase FFM54_RS19865 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS19865 PF18158 Adaptive response protein AidB N-terminal domain FFM54_RS19865 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS19870 PF00171 Aldehyde dehydrogenase family FFM54_RS19880 PF01636 Phosphotransferase enzyme family FFM54_RS19890 PF07690 Major Facilitator Superfamily FFM54_RS19900 PF00892 EamA-like transporter family FFM54_RS19910 PF00248 Aldo/keto reductase family FFM54_RS19935 PF00438 S-adenosylmethionine synthetase, N-terminal domain FFM54_RS19935 PF02772 S-adenosylmethionine synthetase, central domain FFM54_RS19935 PF02773 S-adenosylmethionine synthetase, C-terminal domain FFM54_RS19940 PF03279 Bacterial lipid A biosynthesis acyltransferase FFM54_RS19945 PF01678 Diaminopimelate epimerase FFM54_RS19955 PF02899 Phage integrase, N-terminal SAM-like domain FFM54_RS19955 PF00589 Phage integrase family FFM54_RS19965 PF02492 CobW/HypB/UreG, nucleotide-binding domain FFM54_RS19965 PF07683 Cobalamin synthesis protein cobW C-terminal domain FFM54_RS19975 PF01258 Prokaryotic dksA/traR C4-type zinc finger FFM54_RS19985 PF00227 Proteasome subunit FFM54_RS19990 PF07724 AAA domain (Cdc48 subfamily) FFM54_RS19990 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS19995 PF00072 Response regulator receiver domain FFM54_RS20000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS20000 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS20015 PF00696 Amino acid kinase family FFM54_RS20025 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS20035 PF00561 alpha/beta hydrolase fold FFM54_RS20045 PF07690 Major Facilitator Superfamily FFM54_RS20055 PF06719 AraC-type transcriptional regulator N-terminus FFM54_RS20055 PF12833 Helix-turn-helix domain FFM54_RS20060 PF00107 Zinc-binding dehydrogenase FFM54_RS20060 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS20070 PF03372 Endonuclease/Exonuclease/phosphatase family FFM54_RS20075 PF03976 Polyphosphate kinase 2 (PPK2) FFM54_RS20080 PF02934 GatB/GatE catalytic domain FFM54_RS20080 PF02637 GatB domain FFM54_RS20085 PF01425 Amidase FFM54_RS20090 PF02686 Glu-tRNAGln amidotransferase C subunit FFM54_RS20110 PF00905 Penicillin binding protein transpeptidase domain FFM54_RS20110 PF03717 Penicillin-binding Protein dimerisation domain FFM54_RS20115 PF01098 Cell cycle protein FFM54_RS20130 PF03328 HpcH/HpaI aldolase/citrate lyase family FFM54_RS20140 PF01242 6-pyruvoyl tetrahydropterin synthase FFM54_RS20150 PF06508 Queuosine biosynthesis protein QueC FFM54_RS20165 PF02954 Bacterial regulatory protein, Fis family FFM54_RS20165 PF00072 Response regulator receiver domain FFM54_RS20165 PF00158 Sigma-54 interaction domain FFM54_RS20170 PF00672 HAMP domain FFM54_RS20170 PF00989 PAS fold FFM54_RS20170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS20170 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS20180 PF01189 16S rRNA methyltransferase RsmB/F FFM54_RS20180 PF01029 NusB family FFM54_RS20190 PF01435 Peptidase family M48 FFM54_RS20195 PF01810 LysE type translocator FFM54_RS20200 PF02911 Formyl transferase, C-terminal domain FFM54_RS20200 PF00551 Formyl transferase FFM54_RS20205 PF01327 Polypeptide deformylase FFM54_RS20210 PF17782 DprA winged helix domain FFM54_RS20210 PF02481 DNA recombination-mediator protein A FFM54_RS20220 PF01751 Toprim domain FFM54_RS20220 PF01131 DNA topoisomerase FFM54_RS20225 PF03466 LysR substrate binding domain FFM54_RS20225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS20230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFM54_RS20230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFM54_RS20260 PF13542 Helix-turn-helix domain of transposase family ISL3 FFM54_RS20260 PF01610 Transposase FFM54_RS20260 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FFM54_RS20295 PF00795 Carbon-nitrogen hydrolase FFM54_RS20300 PF00850 Histone deacetylase domain FFM54_RS20305 PF13416 Bacterial extracellular solute-binding protein FFM54_RS20310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS20310 PF03466 LysR substrate binding domain FFM54_RS20340 PF00140 Sigma-70 factor, region 1.2 FFM54_RS20340 PF03979 Sigma-70 factor, region 1.1 FFM54_RS20340 PF04539 Sigma-70 region 3 FFM54_RS20340 PF04546 Sigma-70, non-essential region FFM54_RS20340 PF04545 Sigma-70, region 4 FFM54_RS20340 PF04542 Sigma-70 region 2 FFM54_RS20345 PF04262 Glutamate-cysteine ligase FFM54_RS20350 PF00730 HhH-GPD superfamily base excision DNA repair protein FFM54_RS20350 PF06029 AlkA N-terminal domain FFM54_RS20350 PF02805 Metal binding domain of Ada FFM54_RS20350 PF12833 Helix-turn-helix domain FFM54_RS20355 PF12833 Helix-turn-helix domain FFM54_RS20355 PF02805 Metal binding domain of Ada FFM54_RS20355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FFM54_RS20355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FFM54_RS20370 PF07152 YaeQ protein FFM54_RS20385 PF13302 Acetyltransferase (GNAT) domain FFM54_RS20410 PF10396 GTP-binding protein TrmE N-terminus FFM54_RS20410 PF01926 50S ribosome-binding GTPase FFM54_RS20410 PF12631 MnmE helical domain FFM54_RS20420 PF14849 YidC periplasmic domain FFM54_RS20420 PF02096 60Kd inner membrane protein FFM54_RS20425 PF01809 Putative membrane protein insertion efficiency factor FFM54_RS20430 PF00825 Ribonuclease P FFM54_RS20435 PF00468 Ribosomal protein L34 FFM54_RS20450 PF02768 DNA polymerase III beta subunit, C-terminal domain FFM54_RS20450 PF02767 DNA polymerase III beta subunit, central domain FFM54_RS20450 PF00712 DNA polymerase III beta subunit, N-terminal domain FFM54_RS20460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS20460 PF18053 DNA gyrase B subunit insert domain FFM54_RS20460 PF01751 Toprim domain FFM54_RS20460 PF00986 DNA gyrase B subunit, carboxyl terminus FFM54_RS20460 PF00204 DNA gyrase B FFM54_RS20480 PF00199 Catalase FFM54_RS20485 PF04542 Sigma-70 region 2 FFM54_RS20485 PF08281 Sigma-70, region 4 FFM54_RS20525 PF02515 CoA-transferase family III FFM54_RS20530 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FFM54_RS20530 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS20530 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FFM54_RS20535 PF02803 Thiolase, C-terminal domain FFM54_RS20535 PF00108 Thiolase, N-terminal domain FFM54_RS20545 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS20545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS20545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS20580 PF03551 Transcriptional regulator PadR-like family FFM54_RS20590 PF05199 GMC oxidoreductase FFM54_RS20590 PF00732 GMC oxidoreductase FFM54_RS20600 PF10703 MoaF N-terminal domain FFM54_RS20600 PF17409 MoaF C-terminal domain FFM54_RS20610 PF00171 Aldehyde dehydrogenase family FFM54_RS20630 PF11862 Domain of unknown function (DUF3382) FFM54_RS20630 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS20635 PF00005 ABC transporter FFM54_RS20635 PF12399 Branched-chain amino acid ATP-binding cassette transporter FFM54_RS20645 PF00005 ABC transporter FFM54_RS20660 PF13609 Gram-negative porin FFM54_RS20670 PF08774 VRR-NUC domain FFM54_RS20670 PF04851 Type III restriction enzyme, res subunit FFM54_RS20675 PF18273 Type III R-M EcoP15I C-terminal domain FFM54_RS20675 PF01555 DNA methylase FFM54_RS20685 PF13609 Gram-negative porin FFM54_RS20690 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS20690 PF00072 Response regulator receiver domain FFM54_RS20695 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS20695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS20700 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS20705 PF00005 ABC transporter FFM54_RS20720 PF13649 Methyltransferase domain FFM54_RS20725 PF09278 MerR, DNA binding FFM54_RS20725 PF00376 MerR family regulatory protein FFM54_RS20730 PF01311 Bacterial export proteins, family 1 FFM54_RS20735 PF01313 Bacterial export proteins, family 3 FFM54_RS20740 PF00813 FliP family FFM54_RS20745 PF04347 Flagellar biosynthesis protein, FliO FFM54_RS20750 PF16973 Flagellar motor switch protein FliN N-terminal FFM54_RS20750 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FFM54_RS20755 PF02154 Flagellar motor switch protein FliM FFM54_RS20755 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FFM54_RS20770 PF04172 LrgB-like family FFM54_RS20775 PF03788 LrgA family FFM54_RS20780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS20780 PF03466 LysR substrate binding domain FFM54_RS20785 PF07690 Major Facilitator Superfamily FFM54_RS20790 PF01047 MarR family FFM54_RS20825 PF03934 Type II secretion system (T2SS), protein K FFM54_RS20835 PF07963 Prokaryotic N-terminal methylation motif FFM54_RS20835 PF02501 Type II secretion system (T2SS), protein I FFM54_RS20840 PF12019 Type II transport protein GspH FFM54_RS20840 PF07963 Prokaryotic N-terminal methylation motif FFM54_RS20845 PF07963 Prokaryotic N-terminal methylation motif FFM54_RS20845 PF08334 Type II secretion system (T2SS), protein G FFM54_RS20860 PF00482 Type II secretion system (T2SS), protein F FFM54_RS20865 PF00437 Type II/IV secretion system protein FFM54_RS20870 PF03958 Bacterial type II/III secretion system short domain FFM54_RS20870 PF00263 Bacterial type II and III secretion system protein FFM54_RS20875 PF01464 Transglycosylase SLT domain FFM54_RS20885 PF07683 Cobalamin synthesis protein cobW C-terminal domain FFM54_RS20885 PF02492 CobW/HypB/UreG, nucleotide-binding domain FFM54_RS20890 PF00216 Bacterial DNA-binding protein FFM54_RS20915 PF04107 Glutamate-cysteine ligase family 2(GCS2) FFM54_RS20930 PF00117 Glutamine amidotransferase class-I FFM54_RS20930 PF02540 NAD synthase FFM54_RS20930 PF00958 GMP synthase C terminal domain FFM54_RS20935 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FFM54_RS20955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS20955 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS20955 PF08521 Two-component sensor kinase N-terminal FFM54_RS20960 PF00072 Response regulator receiver domain FFM54_RS20960 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS20970 PF01329 Pterin 4 alpha carbinolamine dehydratase FFM54_RS20975 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FFM54_RS20980 PF01037 Lrp/AsnC ligand binding domain FFM54_RS20995 PF03466 LysR substrate binding domain FFM54_RS20995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS21000 PF00171 Aldehyde dehydrogenase family FFM54_RS21010 PF00732 GMC oxidoreductase FFM54_RS21010 PF05199 GMC oxidoreductase FFM54_RS21025 PF12399 Branched-chain amino acid ATP-binding cassette transporter FFM54_RS21025 PF00005 ABC transporter FFM54_RS21030 PF00005 ABC transporter FFM54_RS21040 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS21065 PF12399 Branched-chain amino acid ATP-binding cassette transporter FFM54_RS21065 PF00005 ABC transporter FFM54_RS21070 PF00005 ABC transporter FFM54_RS21075 PF13932 GidA associated domain FFM54_RS21075 PF01134 Glucose inhibited division protein A FFM54_RS21080 PF02527 rRNA small subunit methyltransferase G FFM54_RS21085 PF13614 AAA domain FFM54_RS21090 PF02195 ParB-like nuclease domain FFM54_RS21090 PF17762 HTH domain found in ParB protein FFM54_RS21095 PF03600 Citrate transporter FFM54_RS21110 PF00119 ATP synthase A chain FFM54_RS21115 PF00137 ATP synthase subunit C FFM54_RS21120 PF00430 ATP synthase B/B' CF(0) FFM54_RS21125 PF00213 ATP synthase delta (OSCP) subunit FFM54_RS21130 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFM54_RS21130 PF00306 ATP synthase alpha/beta chain, C terminal domain FFM54_RS21130 PF02874 ATP synthase alpha/beta family, beta-barrel domain FFM54_RS21135 PF00231 ATP synthase FFM54_RS21140 PF02874 ATP synthase alpha/beta family, beta-barrel domain FFM54_RS21140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFM54_RS21145 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FFM54_RS21145 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FFM54_RS21150 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS21150 PF00501 AMP-binding enzyme FFM54_RS21170 PF13380 CoA binding domain FFM54_RS21175 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS21180 PF01208 Uroporphyrinogen decarboxylase (URO-D) FFM54_RS21190 PF00271 Helicase conserved C-terminal domain FFM54_RS21190 PF17764 3′ DNA-binding domain (3′BD) FFM54_RS21190 PF00270 DEAD/DEAH box helicase FFM54_RS21190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FFM54_RS21190 PF18074 Primosomal protein N C-terminal domain FFM54_RS21210 PF14850 DNA-binding domain of Proline dehydrogenase FFM54_RS21210 PF00171 Aldehyde dehydrogenase family FFM54_RS21210 PF01619 Proline dehydrogenase FFM54_RS21210 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FFM54_RS21215 PF13458 Periplasmic binding protein FFM54_RS21220 PF00501 AMP-binding enzyme FFM54_RS21220 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS21225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS21225 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS21225 PF18158 Adaptive response protein AidB N-terminal domain FFM54_RS21245 PF00155 Aminotransferase class I and II FFM54_RS21250 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS21260 PF02913 FAD linked oxidases, C-terminal domain FFM54_RS21260 PF01565 FAD binding domain FFM54_RS21270 PF13411 MerR HTH family regulatory protein FFM54_RS21275 PF00403 Heavy-metal-associated domain FFM54_RS21290 PF05552 Conserved TM helix FFM54_RS21310 PF13520 Amino acid permease FFM54_RS21315 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FFM54_RS21320 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FFM54_RS21330 PF00171 Aldehyde dehydrogenase family FFM54_RS21340 PF12833 Helix-turn-helix domain FFM54_RS21350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFM54_RS21350 PF00205 Thiamine pyrophosphate enzyme, central domain FFM54_RS21350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFM54_RS21360 PF03313 Serine dehydratase alpha chain FFM54_RS21360 PF03315 Serine dehydratase beta chain FFM54_RS21375 PF02347 Glycine cleavage system P-protein FFM54_RS21385 PF01597 Glycine cleavage H-protein FFM54_RS21390 PF08669 Glycine cleavage T-protein C-terminal barrel domain FFM54_RS21390 PF01571 Aminomethyltransferase folate-binding domain FFM54_RS21405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFM54_RS21405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFM54_RS21425 PF00580 UvrD/REP helicase N-terminal domain FFM54_RS21425 PF13361 UvrD-like helicase C-terminal domain FFM54_RS21430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FFM54_RS21495 PF00589 Phage integrase family FFM54_RS21535 PF03852 DNA mismatch endonuclease Vsr FFM54_RS21540 PF00145 C-5 cytosine-specific DNA methylase FFM54_RS21610 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FFM54_RS21610 PF18416 N-acetylglucosamine binding protein domain 2 FFM54_RS21620 PF01565 FAD binding domain FFM54_RS21620 PF08031 Berberine and berberine like FFM54_RS21630 PF00672 HAMP domain FFM54_RS21630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS21630 PF02203 Tar ligand binding domain homologue FFM54_RS21635 PF00561 alpha/beta hydrolase fold FFM54_RS21650 PF03783 Curli production assembly/transport component CsgG FFM54_RS21660 PF05643 Putative bacterial lipoprotein (DUF799) FFM54_RS21670 PF04185 Phosphoesterase family FFM54_RS21700 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FFM54_RS21700 PF00355 Rieske [2Fe-2S] domain FFM54_RS21715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FFM54_RS21715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FFM54_RS21725 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FFM54_RS21725 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FFM54_RS21730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFM54_RS21750 PF00669 Bacterial flagellin N-terminal helical region FFM54_RS21750 PF00700 Bacterial flagellin C-terminal helical region FFM54_RS21755 PF01165 Ribosomal protein S21 FFM54_RS21765 PF03352 Methyladenine glycosylase FFM54_RS21765 PF00117 Glutamine amidotransferase class-I FFM54_RS21765 PF13302 Acetyltransferase (GNAT) domain FFM54_RS21765 PF00958 GMP synthase C terminal domain FFM54_RS21765 PF13673 Acetyltransferase (GNAT) domain FFM54_RS21780 PF00230 Major intrinsic protein FFM54_RS21795 PF13439 Glycosyltransferase Family 4 FFM54_RS21805 PF05247 Flagellar transcriptional activator (FlhD) FFM54_RS21810 PF05280 Flagellar transcriptional activator (FlhC) FFM54_RS21815 PF01618 MotA/TolQ/ExbB proton channel family FFM54_RS21820 PF13677 Membrane MotB of proton-channel complex MotA/MotB FFM54_RS21820 PF00691 OmpA family FFM54_RS21825 PF01339 CheB methylesterase FFM54_RS21825 PF00072 Response regulator receiver domain FFM54_RS21835 PF01584 CheW-like domain FFM54_RS21845 PF03705 CheR methyltransferase, all-alpha domain FFM54_RS21845 PF01739 CheR methyltransferase, SAM binding domain FFM54_RS21850 PF03975 CheD chemotactic sensory transduction FFM54_RS21855 PF00072 Response regulator receiver domain FFM54_RS21855 PF01339 CheB methylesterase FFM54_RS21865 PF00072 Response regulator receiver domain FFM54_RS21870 PF04344 Chemotaxis phosphatase, CheZ FFM54_RS21890 PF01312 FlhB HrpN YscU SpaS Family FFM54_RS21895 PF00771 FHIPEP family FFM54_RS21900 PF00448 SRP54-type protein, GTPase domain FFM54_RS21900 PF00448 SRP54-type protein, GTPase domain FFM54_RS21910 PF04542 Sigma-70 region 2 FFM54_RS21910 PF04545 Sigma-70, region 4 FFM54_RS21910 PF04539 Sigma-70 region 3 FFM54_RS21915 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FFM54_RS21915 PF05221 S-adenosyl-L-homocysteine hydrolase FFM54_RS21920 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV FFM54_RS21925 PF02219 Methylenetetrahydrofolate reductase FFM54_RS21930 PF01425 Amidase FFM54_RS21935 PF01738 Dienelactone hydrolase family FFM54_RS21945 PF03060 Nitronate monooxygenase FFM54_RS21955 PF13458 Periplasmic binding protein FFM54_RS21960 PF07690 Major Facilitator Superfamily FFM54_RS21980 PF16916 Dimerisation domain of Zinc Transporter FFM54_RS21980 PF01545 Cation efflux family FFM54_RS21985 PF01037 Lrp/AsnC ligand binding domain FFM54_RS21995 PF00753 Metallo-beta-lactamase superfamily FFM54_RS22005 PF03330 Lytic transglycolase FFM54_RS22005 PF05036 Sporulation related domain FFM54_RS22010 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFM54_RS22015 PF02021 Uncharacterised protein family UPF0102 FFM54_RS22020 PF13580 SIS domain FFM54_RS22025 PF04972 BON domain FFM54_RS22030 PF00034 Cytochrome c FFM54_RS22040 PF00324 Amino acid permease FFM54_RS22085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFM54_RS22085 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FFM54_RS22090 PF01810 LysE type translocator FFM54_RS22095 PF07690 Major Facilitator Superfamily FFM54_RS22100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS22100 PF03466 LysR substrate binding domain FFM54_RS22105 PF03922 OmpW family FFM54_RS22125 PF01118 Semialdehyde dehydrogenase, NAD binding domain FFM54_RS22130 PF03358 NADPH-dependent FMN reductase FFM54_RS22140 PF01161 Phosphatidylethanolamine-binding protein FFM54_RS22145 PF00156 Phosphoribosyl transferase domain FFM54_RS22155 PF00390 Malic enzyme, N-terminal domain FFM54_RS22155 PF01515 Phosphate acetyl/butaryl transferase FFM54_RS22155 PF03949 Malic enzyme, NAD binding domain FFM54_RS22175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FFM54_RS22180 PF13404 AsnC-type helix-turn-helix domain FFM54_RS22180 PF01037 Lrp/AsnC ligand binding domain FFM54_RS22190 PF17932 Tetracyclin repressor-like, C-terminal domain FFM54_RS22190 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS22200 PF00175 Oxidoreductase NAD-binding domain FFM54_RS22200 PF00970 Oxidoreductase FAD-binding domain FFM54_RS22200 PF00111 2Fe-2S iron-sulfur cluster binding domain FFM54_RS22205 PF01883 Iron-sulfur cluster assembly protein FFM54_RS22210 PF05138 Phenylacetic acid catabolic protein FFM54_RS22215 PF06243 Phenylacetic acid degradation B FFM54_RS22220 PF05138 Phenylacetic acid catabolic protein FFM54_RS22300 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FFM54_RS22305 PF00467 KOW motif FFM54_RS22305 PF02357 Transcription termination factor nusG FFM54_RS22310 PF03946 Ribosomal protein L11, N-terminal domain FFM54_RS22310 PF00298 Ribosomal protein L11, RNA binding domain FFM54_RS22315 PF00687 Ribosomal protein L1p/L10e family FFM54_RS22320 PF00466 Ribosomal protein L10 FFM54_RS22325 PF16320 Ribosomal protein L7/L12 dimerisation domain FFM54_RS22325 PF00542 Ribosomal protein L7/L12 C-terminal domain FFM54_RS22330 PF04561 RNA polymerase Rpb2, domain 2 FFM54_RS22330 PF04560 RNA polymerase Rpb2, domain 7 FFM54_RS22330 PF04563 RNA polymerase beta subunit FFM54_RS22330 PF00562 RNA polymerase Rpb2, domain 6 FFM54_RS22330 PF04565 RNA polymerase Rpb2, domain 3 FFM54_RS22330 PF10385 RNA polymerase beta subunit external 1 domain FFM54_RS22335 PF05000 RNA polymerase Rpb1, domain 4 FFM54_RS22335 PF04998 RNA polymerase Rpb1, domain 5 FFM54_RS22335 PF04983 RNA polymerase Rpb1, domain 3 FFM54_RS22335 PF00623 RNA polymerase Rpb1, domain 2 FFM54_RS22335 PF04997 RNA polymerase Rpb1, domain 1 FFM54_RS22340 PF00270 DEAD/DEAH box helicase FFM54_RS22340 PF00570 HRDC domain FFM54_RS22340 PF00271 Helicase conserved C-terminal domain FFM54_RS22340 PF16124 RecQ zinc-binding FFM54_RS22340 PF09382 RQC domain FFM54_RS22350 PF00164 Ribosomal protein S12/S23 FFM54_RS22355 PF00177 Ribosomal protein S7p/S5e FFM54_RS22360 PF03764 Elongation factor G, domain IV FFM54_RS22360 PF14492 Elongation Factor G, domain II FFM54_RS22360 PF03144 Elongation factor Tu domain 2 FFM54_RS22360 PF00009 Elongation factor Tu GTP binding domain FFM54_RS22360 PF00679 Elongation factor G C-terminus FFM54_RS22365 PF03143 Elongation factor Tu C-terminal domain FFM54_RS22365 PF00009 Elongation factor Tu GTP binding domain FFM54_RS22365 PF03144 Elongation factor Tu domain 2 FFM54_RS22370 PF00338 Ribosomal protein S10p/S20e FFM54_RS22375 PF00297 Ribosomal protein L3 FFM54_RS22380 PF00573 Ribosomal protein L4/L1 family FFM54_RS22385 PF00276 Ribosomal protein L23 FFM54_RS22390 PF03947 Ribosomal Proteins L2, C-terminal domain FFM54_RS22390 PF00181 Ribosomal Proteins L2, RNA binding domain FFM54_RS22395 PF00203 Ribosomal protein S19 FFM54_RS22400 PF00237 Ribosomal protein L22p/L17e FFM54_RS22405 PF00189 Ribosomal protein S3, C-terminal domain FFM54_RS22405 PF07650 KH domain FFM54_RS22410 PF00252 Ribosomal protein L16p/L10e FFM54_RS22415 PF00831 Ribosomal L29 protein FFM54_RS22420 PF00366 Ribosomal protein S17 FFM54_RS22425 PF00238 Ribosomal protein L14p/L23e FFM54_RS22430 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FFM54_RS22435 PF00281 Ribosomal protein L5 FFM54_RS22435 PF00673 ribosomal L5P family C-terminus FFM54_RS22440 PF00253 Ribosomal protein S14p/S29e FFM54_RS22445 PF00410 Ribosomal protein S8 FFM54_RS22450 PF00347 Ribosomal protein L6 FFM54_RS22455 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FFM54_RS22460 PF03719 Ribosomal protein S5, C-terminal domain FFM54_RS22460 PF00333 Ribosomal protein S5, N-terminal domain FFM54_RS22465 PF00327 Ribosomal protein L30p/L7e FFM54_RS22470 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FFM54_RS22475 PF00344 SecY translocase FFM54_RS22480 PF01176 Translation initiation factor 1A / IF-1 FFM54_RS22485 PF00444 Ribosomal protein L36 FFM54_RS22490 PF00416 Ribosomal protein S13/S18 FFM54_RS22495 PF00411 Ribosomal protein S11 FFM54_RS22500 PF00163 Ribosomal protein S4/S9 N-terminal domain FFM54_RS22500 PF01479 S4 domain FFM54_RS22505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FFM54_RS22505 PF01000 RNA polymerase Rpb3/RpoA insert domain FFM54_RS22505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FFM54_RS22510 PF01196 Ribosomal protein L17 FFM54_RS22520 PF02683 Cytochrome C biogenesis protein transmembrane region FFM54_RS22520 PF11412 Disulphide bond corrector protein DsbC FFM54_RS22525 PF00490 Delta-aminolevulinic acid dehydratase FFM54_RS22530 PF01926 50S ribosome-binding GTPase FFM54_RS22535 PF00034 Cytochrome c FFM54_RS22540 PF05140 ResB-like family FFM54_RS22545 PF01578 Cytochrome C assembly protein FFM54_RS22550 PF00174 Oxidoreductase molybdopterin binding domain FFM54_RS22555 PF01794 Ferric reductase like transmembrane component FFM54_RS22560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FFM54_RS22560 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FFM54_RS22570 PF01491 Frataxin-like domain FFM54_RS22575 PF17092 Penicillin-binding protein OB-like domain FFM54_RS22575 PF00912 Transglycosylase FFM54_RS22575 PF00905 Penicillin binding protein transpeptidase domain FFM54_RS22595 PF07660 Secretin and TonB N terminus short domain FFM54_RS22595 PF03958 Bacterial type II/III secretion system short domain FFM54_RS22595 PF00263 Bacterial type II and III secretion system protein FFM54_RS22595 PF11741 AMIN domain FFM54_RS22600 PF01202 Shikimate kinase FFM54_RS22605 PF01761 3-dehydroquinate synthase FFM54_RS22610 PF01966 HD domain FFM54_RS22610 PF13286 Phosphohydrolase-associated domain FFM54_RS22615 PF13416 Bacterial extracellular solute-binding protein FFM54_RS22620 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS22625 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS22630 PF17912 MalK OB fold domain FFM54_RS22630 PF00005 ABC transporter FFM54_RS22635 PF03009 Glycerophosphoryl diester phosphodiesterase family FFM54_RS22650 PF01645 Conserved region in glutamate synthase FFM54_RS22650 PF04898 Glutamate synthase central domain FFM54_RS22650 PF01493 GXGXG motif FFM54_RS22650 PF00310 Glutamine amidotransferases class-II FFM54_RS22655 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS22655 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FFM54_RS22665 PF01235 Sodium:alanine symporter family FFM54_RS22675 PF00005 ABC transporter FFM54_RS22675 PF06472 ABC transporter transmembrane region 2 FFM54_RS22680 PF01266 FAD dependent oxidoreductase FFM54_RS22690 PF05690 Thiazole biosynthesis protein ThiG FFM54_RS22695 PF02581 Thiamine monophosphate synthase FFM54_RS22700 PF00005 ABC transporter FFM54_RS22705 PF02405 Permease MlaE FFM54_RS22710 PF02470 MlaD protein FFM54_RS22735 PF00005 ABC transporter FFM54_RS22740 PF01061 ABC-2 type transporter FFM54_RS22750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFM54_RS22755 PF01634 ATP phosphoribosyltransferase FFM54_RS22760 PF00815 Histidinol dehydrogenase FFM54_RS22765 PF00155 Aminotransferase class I and II FFM54_RS22770 PF00475 Imidazoleglycerol-phosphate dehydratase FFM54_RS22775 PF01914 MarC family integral membrane protein FFM54_RS22780 PF00117 Glutamine amidotransferase class-I FFM54_RS22785 PF00977 Histidine biosynthesis protein FFM54_RS22790 PF00977 Histidine biosynthesis protein FFM54_RS22795 PF01502 Phosphoribosyl-AMP cyclohydrolase FFM54_RS22800 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FFM54_RS22815 PF02416 mttA/Hcf106 family FFM54_RS22820 PF02416 mttA/Hcf106 family FFM54_RS22825 PF00902 Sec-independent protein translocase protein (TatC) FFM54_RS22830 PF17820 PDZ domain FFM54_RS22830 PF13180 PDZ domain FFM54_RS22835 PF01784 NIF3 (NGG1p interacting factor 3) FFM54_RS22840 PF00355 Rieske [2Fe-2S] domain FFM54_RS22840 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FFM54_RS22845 PF00033 Cytochrome b/b6/petB FFM54_RS22845 PF00032 Cytochrome b(C-terminal)/b6/petD FFM54_RS22850 PF02167 Cytochrome C1 family FFM54_RS22855 PF00043 Glutathione S-transferase, C-terminal domain FFM54_RS22855 PF02798 Glutathione S-transferase, N-terminal domain FFM54_RS22860 PF04386 Stringent starvation protein B FFM54_RS22870 PF02384 N-6 DNA Methylase FFM54_RS22900 PF13356 Arm DNA-binding domain FFM54_RS22900 PF00589 Phage integrase family FFM54_RS22920 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FFM54_RS22935 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FFM54_RS22940 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FFM54_RS22955 PF05947 Type VI secretion system, TssF FFM54_RS22965 PF17871 AAA lid domain FFM54_RS22965 PF07724 AAA domain (Cdc48 subfamily) FFM54_RS22965 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS22965 PF10431 C-terminal, D2-small domain, of ClpB protein FFM54_RS22975 PF00691 OmpA family FFM54_RS22985 PF06744 Type VI secretion protein IcmF C-terminal FFM54_RS22985 PF14331 ImcF-related N-terminal domain FFM54_RS22985 PF06761 Intracellular multiplication and human macrophage-killing FFM54_RS23015 PF00664 ABC transporter transmembrane region FFM54_RS23015 PF00005 ABC transporter FFM54_RS23015 PF03412 Peptidase C39 family FFM54_RS23020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFM54_RS23020 PF00529 HlyD membrane-fusion protein of T1SS FFM54_RS23055 PF01433 Peptidase family M1 domain FFM54_RS23055 PF11838 ERAP1-like C-terminal domain FFM54_RS23135 PF00012 Hsp70 protein FFM54_RS23145 PF00313 'Cold-shock' DNA-binding domain FFM54_RS23150 PF13520 Amino acid permease FFM54_RS23160 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FFM54_RS23165 PF02441 Flavoprotein FFM54_RS23170 PF00462 Glutaredoxin FFM54_RS23175 PF05175 Methyltransferase small domain FFM54_RS23175 PF17827 PrmC N-terminal domain FFM54_RS23180 PF00472 RF-1 domain FFM54_RS23180 PF03462 PCRF domain FFM54_RS23185 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FFM54_RS23185 PF01488 Shikimate / quinate 5-dehydrogenase FFM54_RS23185 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FFM54_RS23205 PF00557 Metallopeptidase family M24 FFM54_RS23205 PF01321 Creatinase/Prolidase N-terminal domain FFM54_RS23210 PF00857 Isochorismatase family FFM54_RS23225 PF00005 ABC transporter FFM54_RS23225 PF12848 ABC transporter FFM54_RS23240 PF03009 Glycerophosphoryl diester phosphodiesterase family FFM54_RS23255 PF00324 Amino acid permease FFM54_RS23265 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FFM54_RS23275 PF06071 Protein of unknown function (DUF933) FFM54_RS23275 PF01926 50S ribosome-binding GTPase FFM54_RS23305 PF01494 FAD binding domain FFM54_RS23310 PF13098 Thioredoxin-like domain FFM54_RS23310 PF10411 Disulfide bond isomerase protein N-terminus FFM54_RS23320 PF02525 Flavodoxin-like fold FFM54_RS23325 PF03167 Uracil DNA glycosylase superfamily FFM54_RS23335 PF00218 Indole-3-glycerol phosphate synthase FFM54_RS23340 PF02885 Glycosyl transferase family, helical bundle domain FFM54_RS23340 PF00591 Glycosyl transferase family, a/b domain FFM54_RS23345 PF00117 Glutamine amidotransferase class-I FFM54_RS23350 PF00425 chorismate binding enzyme FFM54_RS23350 PF04715 Anthranilate synthase component I, N terminal region FFM54_RS23360 PF13419 Haloacid dehalogenase-like hydrolase FFM54_RS23365 PF00834 Ribulose-phosphate 3 epimerase family FFM54_RS23375 PF04379 ApaG domain FFM54_RS23385 PF03562 MltA specific insert domain FFM54_RS23385 PF06725 3D domain FFM54_RS23390 PF00501 AMP-binding enzyme FFM54_RS23390 PF14535 AMP-binding enzyme C-terminal domain FFM54_RS23395 PF03061 Thioesterase superfamily FFM54_RS23400 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS23405 PF02803 Thiolase, C-terminal domain FFM54_RS23405 PF00108 Thiolase, N-terminal domain FFM54_RS23415 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS23465 PF01568 Molydopterin dinucleotide binding domain FFM54_RS23465 PF00384 Molybdopterin oxidoreductase FFM54_RS23465 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFM54_RS23470 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS23470 PF00501 AMP-binding enzyme FFM54_RS23475 PF13609 Gram-negative porin FFM54_RS23480 PF03232 Ubiquinone biosynthesis protein COQ7 FFM54_RS23485 PF02381 MraZ protein, putative antitoxin-like FFM54_RS23490 PF01795 MraW methylase family FFM54_RS23495 PF04999 Cell division protein FtsL FFM54_RS23500 PF00905 Penicillin binding protein transpeptidase domain FFM54_RS23500 PF03717 Penicillin-binding Protein dimerisation domain FFM54_RS23505 PF02875 Mur ligase family, glutamate ligase domain FFM54_RS23505 PF08245 Mur ligase middle domain FFM54_RS23510 PF02875 Mur ligase family, glutamate ligase domain FFM54_RS23510 PF08245 Mur ligase middle domain FFM54_RS23510 PF01225 Mur ligase family, catalytic domain FFM54_RS23515 PF00953 Glycosyl transferase family 4 FFM54_RS23515 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FFM54_RS23520 PF08245 Mur ligase middle domain FFM54_RS23520 PF02875 Mur ligase family, glutamate ligase domain FFM54_RS23525 PF01098 Cell cycle protein FFM54_RS23530 PF03033 Glycosyltransferase family 28 N-terminal domain FFM54_RS23530 PF04101 Glycosyltransferase family 28 C-terminal domain FFM54_RS23535 PF08245 Mur ligase middle domain FFM54_RS23535 PF01225 Mur ligase family, catalytic domain FFM54_RS23535 PF02875 Mur ligase family, glutamate ligase domain FFM54_RS23540 PF07478 D-ala D-ala ligase C-terminus FFM54_RS23540 PF01820 D-ala D-ala ligase N-terminus FFM54_RS23545 PF08478 POTRA domain, FtsQ-type FFM54_RS23545 PF03799 Cell division protein FtsQ FFM54_RS23550 PF02491 SHS2 domain inserted in FTSA FFM54_RS23560 PF12327 FtsZ family, C-terminal domain FFM54_RS23560 PF00091 Tubulin/FtsZ family, GTPase domain FFM54_RS23565 PF08534 Redoxin FFM54_RS23570 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FFM54_RS23585 PF07516 SecA Wing and Scaffold domain FFM54_RS23585 PF02810 SEC-C motif FFM54_RS23585 PF07517 SecA DEAD-like domain FFM54_RS23585 PF01043 SecA preprotein cross-linking domain FFM54_RS23590 PF01960 ArgJ family FFM54_RS23600 PF00293 NUDIX domain FFM54_RS23605 PF03884 DNA gyrase inhibitor YacG FFM54_RS23610 PF07072 Cell division protein FFM54_RS23615 PF01121 Dephospho-CoA kinase FFM54_RS23620 PF01478 Type IV leader peptidase family FFM54_RS23620 PF06750 Bacterial Peptidase A24 N-terminal domain FFM54_RS23625 PF00482 Type II secretion system (T2SS), protein F FFM54_RS23630 PF00437 Type II/IV secretion system protein FFM54_RS23630 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FFM54_RS23635 PF03471 Transporter associated domain FFM54_RS23635 PF00571 CBS domain FFM54_RS23635 PF01595 Cyclin M transmembrane N-terminal domain FFM54_RS23645 PF00348 Polyprenyl synthetase FFM54_RS23650 PF00829 Ribosomal prokaryotic L21 protein FFM54_RS23655 PF01016 Ribosomal L27 protein FFM54_RS23660 PF01926 50S ribosome-binding GTPase FFM54_RS23660 PF01018 GTP1/OBG FFM54_RS23665 PF00696 Amino acid kinase family FFM54_RS23665 PF01472 PUA domain FFM54_RS23680 PF00293 NUDIX domain FFM54_RS23690 PF03129 Anticodon binding domain FFM54_RS23690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFM54_RS23690 PF04073 Aminoacyl-tRNA editing domain FFM54_RS23695 PF01914 MarC family integral membrane protein FFM54_RS23700 PF00156 Phosphoribosyl transferase domain FFM54_RS23705 PF00448 SRP54-type protein, GTPase domain FFM54_RS23705 PF02881 SRP54-type protein, helical bundle domain FFM54_RS23705 PF02978 Signal peptide binding domain FFM54_RS23710 PF01578 Cytochrome C assembly protein FFM54_RS23720 PF01510 N-acetylmuramoyl-L-alanine amidase FFM54_RS23730 PF02867 Ribonucleotide reductase, barrel domain FFM54_RS23730 PF03477 ATP cone domain FFM54_RS23730 PF00317 Ribonucleotide reductase, all-alpha domain FFM54_RS23740 PF00268 Ribonucleotide reductase, small chain FFM54_RS23760 PF00294 pfkB family carbohydrate kinase FFM54_RS23765 PF08534 Redoxin FFM54_RS23780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFM54_RS23780 PF02785 Biotin carboxylase C-terminal domain FFM54_RS23780 PF00289 Biotin carboxylase, N-terminal domain FFM54_RS23785 PF00364 Biotin-requiring enzyme FFM54_RS23790 PF01220 Dehydroquinase class II FFM54_RS23795 PF00578 AhpC/TSA family FFM54_RS23805 PF08245 Mur ligase middle domain FFM54_RS23805 PF02875 Mur ligase family, glutamate ligase domain FFM54_RS23805 PF01225 Mur ligase family, catalytic domain FFM54_RS23810 PF05728 Uncharacterised protein family (UPF0227) FFM54_RS23815 PF00773 RNB domain FFM54_RS23820 PF01488 Shikimate / quinate 5-dehydrogenase FFM54_RS23820 PF08501 Shikimate dehydrogenase substrate binding domain FFM54_RS23820 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FFM54_RS23825 PF00912 Transglycosylase FFM54_RS23850 PF09339 IclR helix-turn-helix domain FFM54_RS23850 PF01614 Bacterial transcriptional regulator FFM54_RS23855 PF05035 2-keto-3-deoxy-galactonokinase FFM54_RS23870 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FFM54_RS23875 PF00005 ABC transporter FFM54_RS23880 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS23895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FFM54_RS23900 PF02464 Competence-damaged protein FFM54_RS23905 PF04608 Phosphatidylglycerophosphatase A FFM54_RS23910 PF02769 AIR synthase related protein, C-terminal domain FFM54_RS23910 PF00586 AIR synthase related protein, N-terminal domain FFM54_RS23915 PF00390 Malic enzyme, N-terminal domain FFM54_RS23915 PF01515 Phosphate acetyl/butaryl transferase FFM54_RS23915 PF03949 Malic enzyme, NAD binding domain FFM54_RS23935 PF04452 RNA methyltransferase FFM54_RS23945 PF17284 Spermidine synthase tetramerisation domain FFM54_RS23955 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FFM54_RS23955 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FFM54_RS23965 PF07690 Major Facilitator Superfamily FFM54_RS23970 PF02560 Cyanate lyase C-terminal domain FFM54_RS23975 PF00484 Carbonic anhydrase FFM54_RS23980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS23980 PF03466 LysR substrate binding domain FFM54_RS23990 PF07729 FCD domain FFM54_RS23990 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS23995 PF00375 Sodium:dicarboxylate symporter family FFM54_RS24000 PF03561 Allantoicase repeat FFM54_RS24005 PF04115 Ureidoglycolate lyase FFM54_RS24010 PF01475 Ferric uptake regulator family FFM54_RS24015 PF04355 SmpA / OmlA family FFM54_RS24020 PF01113 Dihydrodipicolinate reductase, N-terminus FFM54_RS24020 PF05173 Dihydrodipicolinate reductase, C-terminus FFM54_RS24025 PF01618 MotA/TolQ/ExbB proton channel family FFM54_RS24035 PF08264 Anticodon-binding domain of tRNA FFM54_RS24035 PF13603 Leucyl-tRNA synthetase, Domain 2 FFM54_RS24035 PF00133 tRNA synthetases class I (I, L, M and V) FFM54_RS24035 PF09334 tRNA synthetases class I (M) FFM54_RS24045 PF06144 DNA polymerase III, delta subunit FFM54_RS24045 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FFM54_RS24050 PF00171 Aldehyde dehydrogenase family FFM54_RS24055 PF03653 Uncharacterised protein family (UPF0093) FFM54_RS24070 PF01380 SIS domain FFM54_RS24070 PF01418 Helix-turn-helix domain, rpiR family FFM54_RS24070 PF02685 Glucokinase FFM54_RS24080 PF00920 Dehydratase family FFM54_RS24085 PF01081 KDPG and KHG aldolase FFM54_RS24090 PF02447 GntP family permease FFM54_RS24100 PF00206 Lyase FFM54_RS24100 PF08328 Adenylosuccinate lyase C-terminal FFM54_RS24105 PF07690 Major Facilitator Superfamily FFM54_RS24110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS24110 PF03466 LysR substrate binding domain FFM54_RS24120 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FFM54_RS24120 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FFM54_RS24125 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS24130 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS24135 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS24140 PF00005 ABC transporter FFM54_RS24155 PF00166 Chaperonin 10 Kd subunit FFM54_RS24165 PF00011 Hsp20/alpha crystallin family FFM54_RS24170 PF00011 Hsp20/alpha crystallin family FFM54_RS24190 PF13230 Glutamine amidotransferases class-II FFM54_RS24200 PF01979 Amidohydrolase family FFM54_RS24225 PF00572 Ribosomal protein L13 FFM54_RS24230 PF00380 Ribosomal protein S9/S16 FFM54_RS24235 PF01521 Iron-sulphur cluster biosynthesis FFM54_RS24240 PF12833 Helix-turn-helix domain FFM54_RS24240 PF02311 AraC-like ligand binding domain FFM54_RS24245 PF02798 Glutathione S-transferase, N-terminal domain FFM54_RS24250 PF02798 Glutathione S-transferase, N-terminal domain FFM54_RS24250 PF00043 Glutathione S-transferase, C-terminal domain FFM54_RS24255 PF03702 Anhydro-N-acetylmuramic acid kinase FFM54_RS24265 PF01479 S4 domain FFM54_RS24265 PF00579 tRNA synthetases class I (W and Y) FFM54_RS24270 PF02580 D-Tyr-tRNA(Tyr) deacylase FFM54_RS24275 PF00300 Histidine phosphatase superfamily (branch 1) FFM54_RS24290 PF05496 Holliday junction DNA helicase RuvB P-loop domain FFM54_RS24290 PF05491 RuvB C-terminal winged helix domain FFM54_RS24290 PF17864 RuvB AAA lid domain FFM54_RS24295 PF07499 RuvA, C-terminal domain FFM54_RS24295 PF01330 RuvA N terminal domain FFM54_RS24300 PF02075 Crossover junction endodeoxyribonuclease RuvC FFM54_RS24310 PF02142 MGS-like domain FFM54_RS24310 PF01808 AICARFT/IMPCHase bienzyme FFM54_RS24315 PF02954 Bacterial regulatory protein, Fis family FFM54_RS24320 PF01207 Dihydrouridine synthase (Dus) FFM54_RS24325 PF01494 FAD binding domain FFM54_RS24330 PF05195 Aminopeptidase P, N-terminal domain FFM54_RS24330 PF00557 Metallopeptidase family M24 FFM54_RS24340 PF00043 Glutathione S-transferase, C-terminal domain FFM54_RS24340 PF13417 Glutathione S-transferase, N-terminal domain FFM54_RS24345 PF01645 Conserved region in glutamate synthase FFM54_RS24355 PF00293 NUDIX domain FFM54_RS24360 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FFM54_RS24360 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FFM54_RS24365 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FFM54_RS24370 PF02233 NAD(P) transhydrogenase beta subunit FFM54_RS24420 PF01170 Putative RNA methylase family UPF0020 FFM54_RS24420 PF02926 THUMP domain FFM54_RS24440 PF02470 MlaD protein FFM54_RS24445 PF04403 Paraquat-inducible protein A FFM54_RS24465 PF04264 YceI-like domain FFM54_RS24470 PF04264 YceI-like domain FFM54_RS24485 PF07690 Major Facilitator Superfamily FFM54_RS24490 PF07549 SecD/SecF GG Motif FFM54_RS24490 PF02355 Protein export membrane protein FFM54_RS24500 PF02699 Preprotein translocase subunit FFM54_RS24515 PF01702 Queuine tRNA-ribosyltransferase FFM54_RS24525 PF02547 Queuosine biosynthesis protein FFM54_RS24535 PF03466 LysR substrate binding domain FFM54_RS24535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS24540 PF00141 Peroxidase FFM54_RS24555 PF00210 Ferritin-like domain FFM54_RS24565 PF01638 HxlR-like helix-turn-helix FFM54_RS24570 PF01040 UbiA prenyltransferase family FFM54_RS24585 PF07702 UTRA domain FFM54_RS24585 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS24595 PF06754 Phosphonate metabolism protein PhnG FFM54_RS24605 PF05861 Bacterial phosphonate metabolism protein (PhnI) FFM54_RS24610 PF06007 Phosphonate metabolism protein PhnJ FFM54_RS24615 PF00005 ABC transporter FFM54_RS24630 PF07969 Amidohydrolase family FFM54_RS24635 PF00005 ABC transporter FFM54_RS24645 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS24660 PF03807 NADP oxidoreductase coenzyme F420-dependent FFM54_RS24660 PF14748 Pyrroline-5-carboxylate reductase dimerisation FFM54_RS24665 PF01168 Alanine racemase, N-terminal domain FFM54_RS24670 PF13183 4Fe-4S dicluster domain FFM54_RS24670 PF02754 Cysteine-rich domain FFM54_RS24680 PF01565 FAD binding domain FFM54_RS24680 PF02913 FAD linked oxidases, C-terminal domain FFM54_RS24685 PF02913 FAD linked oxidases, C-terminal domain FFM54_RS24685 PF01565 FAD binding domain FFM54_RS24690 PF01923 Cobalamin adenosyltransferase FFM54_RS24695 PF00970 Oxidoreductase FAD-binding domain FFM54_RS24695 PF00042 Globin FFM54_RS24695 PF00175 Oxidoreductase NAD-binding domain FFM54_RS24705 PF00793 DAHP synthetase I family FFM54_RS24715 PF01523 Putative modulator of DNA gyrase FFM54_RS24725 PF13116 Protein of unknown function FFM54_RS24725 PF13502 AsmA-like C-terminal region FFM54_RS24735 PF02463 RecF/RecN/SMC N terminal domain FFM54_RS24740 PF01513 ATP-NAD kinase FFM54_RS24745 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding FFM54_RS24745 PF01628 HrcA protein C terminal domain FFM54_RS24750 PF00762 Ferrochelatase FFM54_RS24755 PF01479 S4 domain FFM54_RS24760 PF01025 GrpE FFM54_RS24770 PF00012 Hsp70 protein FFM54_RS24775 PF00684 DnaJ central domain FFM54_RS24775 PF01556 DnaJ C terminal domain FFM54_RS24775 PF00226 DnaJ domain FFM54_RS24780 PF00425 chorismate binding enzyme FFM54_RS24780 PF04715 Anthranilate synthase component I, N terminal region FFM54_RS24785 PF02548 Ketopantoate hydroxymethyltransferase FFM54_RS24790 PF01712 Deoxynucleoside kinase FFM54_RS24795 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FFM54_RS24800 PF12626 Polymerase A arginine-rich C-terminus FFM54_RS24800 PF12627 Probable RNA and SrmB- binding site of polymerase A FFM54_RS24800 PF01743 Poly A polymerase head domain FFM54_RS24810 PF00308 Bacterial dnaA protein FFM54_RS24820 PF02769 AIR synthase related protein, C-terminal domain FFM54_RS24820 PF00586 AIR synthase related protein, N-terminal domain FFM54_RS24845 PF08676 MutL C terminal dimerisation domain FFM54_RS24845 PF01119 DNA mismatch repair protein, C-terminal domain FFM54_RS24850 PF09335 SNARE associated Golgi protein FFM54_RS24855 PF05552 Conserved TM helix FFM54_RS24855 PF00924 Mechanosensitive ion channel FFM54_RS24865 PF01050 Mannose-6-phosphate isomerase FFM54_RS24865 PF00483 Nucleotidyl transferase FFM54_RS24870 PF05159 Capsule polysaccharide biosynthesis protein FFM54_RS24880 PF02563 Polysaccharide biosynthesis/export protein FFM54_RS24890 PF01061 ABC-2 type transporter FFM54_RS24895 PF00005 ABC transporter FFM54_RS24930 PF16363 GDP-mannose 4,6 dehydratase FFM54_RS24935 PF08544 GHMP kinases C terminal FFM54_RS24935 PF00288 GHMP kinases N terminal domain FFM54_RS24940 PF13580 SIS domain FFM54_RS24945 PF00483 Nucleotidyl transferase FFM54_RS24955 PF05159 Capsule polysaccharide biosynthesis protein FFM54_RS24965 PF00884 Sulfatase FFM54_RS24970 PF02801 Beta-ketoacyl synthase, C-terminal domain FFM54_RS24970 PF00109 Beta-ketoacyl synthase, N-terminal domain FFM54_RS24970 PF08659 KR domain FFM54_RS24970 PF00550 Phosphopantetheine attachment site FFM54_RS24970 PF16197 Ketoacyl-synthetase C-terminal extension FFM54_RS24970 PF00698 Acyl transferase domain FFM54_RS24970 PF14765 Polyketide synthase dehydratase FFM54_RS24970 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS24975 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FFM54_RS24980 PF00155 Aminotransferase class I and II FFM54_RS25015 PF02311 AraC-like ligand binding domain FFM54_RS25015 PF12833 Helix-turn-helix domain FFM54_RS25020 PF02397 Bacterial sugar transferase FFM54_RS25025 PF02563 Polysaccharide biosynthesis/export protein FFM54_RS25025 PF10531 SLBB domain FFM54_RS25030 PF01451 Low molecular weight phosphotyrosine protein phosphatase FFM54_RS25035 PF02706 Chain length determinant protein FFM54_RS25035 PF13614 AAA domain FFM54_RS25035 PF13807 G-rich domain on putative tyrosine kinase FFM54_RS25045 PF05159 Capsule polysaccharide biosynthesis protein FFM54_RS25050 PF00132 Bacterial transferase hexapeptide (six repeats) FFM54_RS25060 PF13439 Glycosyltransferase Family 4 FFM54_RS25060 PF00534 Glycosyl transferases group 1 FFM54_RS25065 PF00793 DAHP synthetase I family FFM54_RS25075 PF00571 CBS domain FFM54_RS25075 PF01380 SIS domain FFM54_RS25080 PF00483 Nucleotidyl transferase FFM54_RS25110 PF00691 OmpA family FFM54_RS25115 PF07676 WD40-like Beta Propeller Repeat FFM54_RS25115 PF04052 TolB amino-terminal domain FFM54_RS25125 PF02472 Biopolymer transport protein ExbD/TolR FFM54_RS25130 PF01618 MotA/TolQ/ExbB proton channel family FFM54_RS25135 PF03061 Thioesterase superfamily FFM54_RS25140 PF00106 short chain dehydrogenase FFM54_RS25150 PF00464 Serine hydroxymethyltransferase FFM54_RS25155 PF03477 ATP cone domain FFM54_RS25200 PF00578 AhpC/TSA family FFM54_RS25200 PF10417 C-terminal domain of 1-Cys peroxiredoxin FFM54_RS25210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS25210 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS25210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS25240 PF01494 FAD binding domain FFM54_RS25250 PF07690 Major Facilitator Superfamily FFM54_RS25255 PF04209 homogentisate 1,2-dioxygenase FFM54_RS25280 PF07690 Major Facilitator Superfamily FFM54_RS25285 PF00881 Nitroreductase family FFM54_RS25290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFM54_RS25290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFM54_RS25295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS25295 PF03466 LysR substrate binding domain FFM54_RS25305 PF00266 Aminotransferase class-V FFM54_RS25315 PF00892 EamA-like transporter family FFM54_RS25325 PF07690 Major Facilitator Superfamily FFM54_RS25335 PF00111 2Fe-2S iron-sulfur cluster binding domain FFM54_RS25335 PF01799 [2Fe-2S] binding domain FFM54_RS25340 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FFM54_RS25340 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FFM54_RS25365 PF07715 TonB-dependent Receptor Plug Domain FFM54_RS25365 PF00593 TonB dependent receptor FFM54_RS25370 PF00005 ABC transporter FFM54_RS25380 PF01032 FecCD transport family FFM54_RS25385 PF03466 LysR substrate binding domain FFM54_RS25385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS25405 PF10605 3HB-oligomer hydrolase (3HBOH) FFM54_RS25425 PF01925 Sulfite exporter TauE/SafE FFM54_RS25435 PF07690 Major Facilitator Superfamily FFM54_RS25440 PF03009 Glycerophosphoryl diester phosphodiesterase family FFM54_RS25445 PF01810 LysE type translocator FFM54_RS25505 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS25505 PF00107 Zinc-binding dehydrogenase FFM54_RS25510 PF01638 HxlR-like helix-turn-helix FFM54_RS25525 PF00166 Chaperonin 10 Kd subunit FFM54_RS25530 PF00118 TCP-1/cpn60 chaperonin family FFM54_RS25540 PF00301 Rubredoxin FFM54_RS25550 PF02622 Uncharacterized ACR, COG1678 FFM54_RS25555 PF03652 Holliday junction resolvase FFM54_RS25560 PF00156 Phosphoribosyl transferase domain FFM54_RS25565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FFM54_RS25565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FFM54_RS25570 PF01979 Amidohydrolase family FFM54_RS25580 PF00149 Calcineurin-like phosphoesterase FFM54_RS25585 PF16363 GDP-mannose 4,6 dehydratase FFM54_RS25590 PF00483 Nucleotidyl transferase FFM54_RS25595 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FFM54_RS25600 PF04321 RmlD substrate binding domain FFM54_RS25610 PF00005 ABC transporter FFM54_RS25620 PF01370 NAD dependent epimerase/dehydratase family FFM54_RS25635 PF00535 Glycosyl transferase family 2 FFM54_RS25645 PF01370 NAD dependent epimerase/dehydratase family FFM54_RS25650 PF00953 Glycosyl transferase family 4 FFM54_RS25655 PF02719 Polysaccharide biosynthesis protein FFM54_RS25665 PF16363 GDP-mannose 4,6 dehydratase FFM54_RS25690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FFM54_RS25690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FFM54_RS25690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FFM54_RS25690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FFM54_RS25695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FFM54_RS25710 PF02492 CobW/HypB/UreG, nucleotide-binding domain FFM54_RS25715 PF01730 UreF FFM54_RS25720 PF05194 UreE urease accessory protein, C-terminal domain FFM54_RS25720 PF02814 UreE urease accessory protein, N-terminal domain FFM54_RS25725 PF01979 Amidohydrolase family FFM54_RS25725 PF00449 Urease alpha-subunit, N-terminal domain FFM54_RS25730 PF00699 Urease beta subunit FFM54_RS25735 PF00547 Urease, gamma subunit FFM54_RS25740 PF01774 UreD urease accessory protein FFM54_RS25745 PF00005 ABC transporter FFM54_RS25750 PF00005 ABC transporter FFM54_RS25755 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS25760 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS25775 PF00202 Aminotransferase class-III FFM54_RS25780 PF00581 Rhodanese-like domain FFM54_RS25795 PF04055 Radical SAM superfamily FFM54_RS25795 PF06969 HemN C-terminal domain FFM54_RS25805 PF03692 Putative zinc- or iron-chelating domain FFM54_RS25815 PF02673 Bacitracin resistance protein BacA FFM54_RS25820 PF02390 Putative methyltransferase FFM54_RS25840 PF00239 Resolvase, N terminal domain FFM54_RS25840 PF02796 Helix-turn-helix domain of resolvase FFM54_RS25875 PF02463 RecF/RecN/SMC N terminal domain FFM54_RS25895 PF08241 Methyltransferase domain FFM54_RS25900 PF09286 Pro-kumamolisin, activation domain FFM54_RS25900 PF00082 Subtilase family FFM54_RS25915 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FFM54_RS25925 PF02325 YGGT family FFM54_RS25950 PF00291 Pyridoxal-phosphate dependent enzyme FFM54_RS25965 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FFM54_RS25975 PF01464 Transglycosylase SLT domain FFM54_RS25980 PF00155 Aminotransferase class I and II FFM54_RS25985 PF01029 NusB family FFM54_RS25990 PF00885 6,7-dimethyl-8-ribityllumazine synthase FFM54_RS25995 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FFM54_RS25995 PF00925 GTP cyclohydrolase II FFM54_RS26005 PF00677 Lumazine binding domain FFM54_RS26010 PF01872 RibD C-terminal domain FFM54_RS26010 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FFM54_RS26015 PF00202 Aminotransferase class-III FFM54_RS26035 PF07690 Major Facilitator Superfamily FFM54_RS26045 PF00291 Pyridoxal-phosphate dependent enzyme FFM54_RS26050 PF00005 ABC transporter FFM54_RS26055 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS26060 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS26070 PF01380 SIS domain FFM54_RS26070 PF02685 Glucokinase FFM54_RS26070 PF01418 Helix-turn-helix domain, rpiR family FFM54_RS26075 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FFM54_RS26080 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FFM54_RS26080 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FFM54_RS26085 PF01547 Bacterial extracellular solute-binding protein FFM54_RS26090 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS26095 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS26100 PF17912 MalK OB fold domain FFM54_RS26100 PF00005 ABC transporter FFM54_RS26105 PF03458 UPF0126 domain FFM54_RS26115 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS26120 PF01580 FtsK/SpoIIIE family FFM54_RS26120 PF09397 Ftsk gamma domain FFM54_RS26120 PF17854 FtsK alpha domain FFM54_RS26120 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FFM54_RS26125 PF03548 Outer membrane lipoprotein carrier protein LolA FFM54_RS26130 PF16193 AAA C-terminal domain FFM54_RS26130 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS26130 PF12002 MgsA AAA+ ATPase C terminal FFM54_RS26140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFM54_RS26140 PF02403 Seryl-tRNA synthetase N-terminal domain FFM54_RS26170 PF03775 Septum formation inhibitor MinC, C-terminal domain FFM54_RS26170 PF05209 Septum formation inhibitor MinC, N-terminal domain FFM54_RS26175 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FFM54_RS26180 PF03776 Septum formation topological specificity factor MinE FFM54_RS26190 PF00654 Voltage gated chloride channel FFM54_RS26195 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FFM54_RS26205 PF00083 Sugar (and other) transporter FFM54_RS26205 PF07690 Major Facilitator Superfamily FFM54_RS26235 PF13356 Arm DNA-binding domain FFM54_RS26235 PF00589 Phage integrase family FFM54_RS26340 PF06969 HemN C-terminal domain FFM54_RS26340 PF04055 Radical SAM superfamily FFM54_RS26345 PF01725 Ham1 family FFM54_RS26350 PF03725 3' exoribonuclease family, domain 2 FFM54_RS26350 PF01138 3' exoribonuclease family, domain 1 FFM54_RS26355 PF03755 YicC-like family, N-terminal region FFM54_RS26355 PF08340 Domain of unknown function (DUF1732) FFM54_RS26360 PF00625 Guanylate kinase FFM54_RS26365 PF01192 RNA polymerase Rpb6 FFM54_RS26370 PF04607 Region found in RelA / SpoT proteins FFM54_RS26370 PF02824 TGS domain FFM54_RS26370 PF13291 ACT domain FFM54_RS26385 PF01272 Transcription elongation factor, GreA/GreB, C-term FFM54_RS26385 PF03449 Transcription elongation factor, N-terminal FFM54_RS26400 PF00313 'Cold-shock' DNA-binding domain FFM54_RS26405 PF00929 Exonuclease FFM54_RS26405 PF02811 PHP domain FFM54_RS26405 PF11490 DNA polymerase III polC-type N-terminus II FFM54_RS26405 PF14480 DNA polymerase III polC-type N-terminus I FFM54_RS26405 PF07733 Bacterial DNA polymerase III alpha NTPase domain FFM54_RS26405 PF14579 Helix-hairpin-helix motif FFM54_RS26405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FFM54_RS26480 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FFM54_RS26485 PF03466 LysR substrate binding domain FFM54_RS26485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS26490 PF01717 Cobalamin-independent synthase, Catalytic domain FFM54_RS26490 PF08267 Cobalamin-independent synthase, N-terminal domain FFM54_RS26510 PF01169 Uncharacterized protein family UPF0016 FFM54_RS26520 PF01979 Amidohydrolase family FFM54_RS26525 PF00860 Permease family FFM54_RS26530 PF00962 Adenosine/AMP deaminase FFM54_RS26545 PF02600 Disulfide bond formation protein DsbB FFM54_RS26550 PF01425 Amidase FFM54_RS26555 PF07722 Peptidase C26 FFM54_RS26565 PF07690 Major Facilitator Superfamily FFM54_RS26580 PF01494 FAD binding domain FFM54_RS26595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FFM54_RS26595 PF00384 Molybdopterin oxidoreductase FFM54_RS26595 PF01568 Molydopterin dinucleotide binding domain FFM54_RS26595 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FFM54_RS26595 PF00037 4Fe-4S binding domain FFM54_RS26600 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FFM54_RS26600 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FFM54_RS26600 PF00037 4Fe-4S binding domain FFM54_RS26610 PF12727 PBP superfamily domain FFM54_RS26610 PF12728 Helix-turn-helix domain FFM54_RS26620 PF00398 Ribosomal RNA adenine dimethylase FFM54_RS26695 PF00226 DnaJ domain FFM54_RS26695 PF01556 DnaJ C terminal domain FFM54_RS26695 PF00684 DnaJ central domain FFM54_RS26700 PF00589 Phage integrase family FFM54_RS26700 PF13356 Arm DNA-binding domain FFM54_RS26710 PF13419 Haloacid dehalogenase-like hydrolase FFM54_RS26720 PF00691 OmpA family FFM54_RS26730 PF00521 DNA gyrase/topoisomerase IV, subunit A FFM54_RS26730 PF03989 DNA gyrase C-terminal domain, beta-propeller FFM54_RS26740 PF00266 Aminotransferase class-V FFM54_RS26745 PF00800 Prephenate dehydratase FFM54_RS26745 PF01817 Chorismate mutase type II FFM54_RS26745 PF01842 ACT domain FFM54_RS26755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFM54_RS26760 PF02224 Cytidylate kinase FFM54_RS26765 PF00575 S1 RNA binding domain FFM54_RS26770 PF00216 Bacterial DNA-binding protein FFM54_RS26780 PF18073 Rubredoxin metal binding domain FFM54_RS26785 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FFM54_RS26785 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FFM54_RS26785 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FFM54_RS26790 PF00294 pfkB family carbohydrate kinase FFM54_RS26795 PF01370 NAD dependent epimerase/dehydratase family FFM54_RS26810 PF00291 Pyridoxal-phosphate dependent enzyme FFM54_RS26815 PF13406 Transglycosylase SLT domain FFM54_RS26820 PF00850 Histone deacetylase domain FFM54_RS26830 PF12146 Serine aminopeptidase, S33 FFM54_RS26835 PF00005 ABC transporter FFM54_RS26835 PF09383 NIL domain FFM54_RS26840 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS26845 PF03180 NLPA lipoprotein FFM54_RS26850 PF01012 Electron transfer flavoprotein domain FFM54_RS26855 PF00766 Electron transfer flavoprotein FAD-binding domain FFM54_RS26855 PF01012 Electron transfer flavoprotein domain FFM54_RS26860 PF12806 Acetyl-CoA dehydrogenase C-terminal like FFM54_RS26860 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS26860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS26860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS26865 PF01266 FAD dependent oxidoreductase FFM54_RS26870 PF01037 Lrp/AsnC ligand binding domain FFM54_RS26885 PF07995 Glucose / Sorbosone dehydrogenase FFM54_RS26890 PF00886 Ribosomal protein S16 FFM54_RS26895 PF01782 RimM N-terminal domain FFM54_RS26895 PF05239 PRC-barrel domain FFM54_RS26900 PF01746 tRNA (Guanine-1)-methyltransferase FFM54_RS26905 PF01245 Ribosomal protein L19 FFM54_RS26930 PF00293 NUDIX domain FFM54_RS26945 PF03193 RsgA GTPase FFM54_RS26950 PF01435 Peptidase family M48 FFM54_RS26955 PF00929 Exonuclease FFM54_RS26960 PF00994 Probable molybdopterin binding domain FFM54_RS26965 PF04751 Protein of unknown function (DUF615) FFM54_RS26975 PF01523 Putative modulator of DNA gyrase FFM54_RS26980 PF00186 Dihydrofolate reductase FFM54_RS26985 PF00072 Response regulator receiver domain FFM54_RS26985 PF02954 Bacterial regulatory protein, Fis family FFM54_RS26985 PF00158 Sigma-54 interaction domain FFM54_RS27005 PF00158 Sigma-54 interaction domain FFM54_RS27005 PF00072 Response regulator receiver domain FFM54_RS27005 PF02954 Bacterial regulatory protein, Fis family FFM54_RS27010 PF00303 Thymidylate synthase FFM54_RS27050 PF03061 Thioesterase superfamily FFM54_RS27055 PF10415 Fumarase C C-terminus FFM54_RS27055 PF00206 Lyase FFM54_RS27070 PF01554 MatE FFM54_RS27095 PF05981 CreA protein FFM54_RS27110 PF11953 Domain of unknown function (DUF3470) FFM54_RS27110 PF00037 4Fe-4S binding domain FFM54_RS27120 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FFM54_RS27120 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FFM54_RS27135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFM54_RS27135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFM54_RS27140 PF02646 RmuC family FFM54_RS27155 PF00994 Probable molybdopterin binding domain FFM54_RS27155 PF03453 MoeA N-terminal region (domain I and II) FFM54_RS27155 PF03454 MoeA C-terminal region (domain IV) FFM54_RS27160 PF12804 MobA-like NTP transferase domain FFM54_RS27165 PF06463 Molybdenum Cofactor Synthesis C FFM54_RS27165 PF04055 Radical SAM superfamily FFM54_RS27180 PF01479 S4 domain FFM54_RS27180 PF00849 RNA pseudouridylate synthase FFM54_RS27185 PF13419 Haloacid dehalogenase-like hydrolase FFM54_RS27195 PF01343 Peptidase family S49 FFM54_RS27200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFM54_RS27205 PF02545 Maf-like protein FFM54_RS27210 PF02620 Large ribosomal RNA subunit accumulation protein YceD FFM54_RS27215 PF01783 Ribosomal L32p protein family FFM54_RS27220 PF02504 Fatty acid synthesis protein FFM54_RS27225 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FFM54_RS27225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FFM54_RS27230 PF00698 Acyl transferase domain FFM54_RS27245 PF00550 Phosphopantetheine attachment site FFM54_RS27250 PF02801 Beta-ketoacyl synthase, C-terminal domain FFM54_RS27250 PF00109 Beta-ketoacyl synthase, N-terminal domain FFM54_RS27260 PF04542 Sigma-70 region 2 FFM54_RS27260 PF08281 Sigma-70, region 4 FFM54_RS27270 PF17188 MucB/RseB C-terminal domain FFM54_RS27270 PF03888 MucB/RseB N-terminal domain FFM54_RS27275 PF13180 PDZ domain FFM54_RS27285 PF00679 Elongation factor G C-terminus FFM54_RS27285 PF00009 Elongation factor Tu GTP binding domain FFM54_RS27285 PF03144 Elongation factor Tu domain 2 FFM54_RS27285 PF06421 GTP-binding protein LepA C-terminus FFM54_RS27290 PF10502 Signal peptidase, peptidase S26 FFM54_RS27295 PF14622 Ribonuclease-III-like FFM54_RS27295 PF00035 Double-stranded RNA binding motif FFM54_RS27300 PF07650 KH domain FFM54_RS27300 PF01926 50S ribosome-binding GTPase FFM54_RS27305 PF11967 Recombination protein O N terminal FFM54_RS27305 PF02565 Recombination protein O C terminal FFM54_RS27310 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FFM54_RS27315 PF01648 4'-phosphopantetheinyl transferase superfamily FFM54_RS27320 PF00933 Glycosyl hydrolase family 3 N terminal domain FFM54_RS27325 PF02954 Bacterial regulatory protein, Fis family FFM54_RS27325 PF00158 Sigma-54 interaction domain FFM54_RS27325 PF00072 Response regulator receiver domain FFM54_RS27330 PF08207 Elongation factor P (EF-P) KOW-like domain FFM54_RS27330 PF01132 Elongation factor P (EF-P) OB domain FFM54_RS27330 PF09285 Elongation factor P, C-terminal FFM54_RS27340 PF08459 UvrC Helix-hairpin-helix N-terminal FFM54_RS27340 PF02151 UvrB/uvrC motif FFM54_RS27340 PF01541 GIY-YIG catalytic domain FFM54_RS27345 PF01066 CDP-alcohol phosphatidyltransferase FFM54_RS27440 PF17854 FtsK alpha domain FFM54_RS27440 PF09397 Ftsk gamma domain FFM54_RS27440 PF01580 FtsK/SpoIIIE family FFM54_RS27440 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FFM54_RS27595 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FFM54_RS27605 PF13185 GAF domain FFM54_RS27610 PF03466 LysR substrate binding domain FFM54_RS27610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS27615 PF05726 Pirin C-terminal cupin domain FFM54_RS27615 PF02678 Pirin FFM54_RS27625 PF13673 Acetyltransferase (GNAT) domain FFM54_RS27650 PF02358 Trehalose-phosphatase FFM54_RS27655 PF00982 Glycosyltransferase family 20 FFM54_RS27660 PF00005 ABC transporter FFM54_RS27660 PF00664 ABC transporter transmembrane region FFM54_RS27665 PF00534 Glycosyl transferases group 1 FFM54_RS27665 PF13439 Glycosyltransferase Family 4 FFM54_RS27680 PF01266 FAD dependent oxidoreductase FFM54_RS27685 PF13458 Periplasmic binding protein FFM54_RS27695 PF04185 Phosphoesterase family FFM54_RS27695 PF05506 Domain of unknown function (DUF756) FFM54_RS27705 PF08543 Phosphomethylpyrimidine kinase FFM54_RS27715 PF00561 alpha/beta hydrolase fold FFM54_RS27725 PF00296 Luciferase-like monooxygenase FFM54_RS27740 PF04794 YdjC-like protein FFM54_RS27755 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS27760 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS27770 PF12833 Helix-turn-helix domain FFM54_RS27785 PF00202 Aminotransferase class-III FFM54_RS27790 PF04958 Arginine N-succinyltransferase beta subunit FFM54_RS27795 PF04958 Arginine N-succinyltransferase beta subunit FFM54_RS27800 PF00171 Aldehyde dehydrogenase family FFM54_RS27805 PF04996 Succinylarginine dihydrolase FFM54_RS27820 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS27830 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FFM54_RS27835 PF00510 Cytochrome c oxidase subunit III FFM54_RS27840 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFM54_RS27845 PF06481 COX Aromatic Rich Motif FFM54_RS27845 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FFM54_RS27860 PF02082 Transcriptional regulator FFM54_RS27875 PF01883 Iron-sulfur cluster assembly protein FFM54_RS27880 PF01592 NifU-like N terminal domain FFM54_RS27885 PF00266 Aminotransferase class-V FFM54_RS27895 PF00005 ABC transporter FFM54_RS27900 PF01458 Uncharacterized protein family (UPF0051) FFM54_RS27920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS27920 PF00672 HAMP domain FFM54_RS27920 PF02203 Tar ligand binding domain homologue FFM54_RS27925 PF06969 HemN C-terminal domain FFM54_RS27925 PF04055 Radical SAM superfamily FFM54_RS27930 PF00027 Cyclic nucleotide-binding domain FFM54_RS27930 PF00520 Ion transport protein FFM54_RS27955 PF01136 Peptidase family U32 FFM54_RS27960 PF01136 Peptidase family U32 FFM54_RS27965 PF02036 SCP-2 sterol transfer family FFM54_RS27970 PF08859 DGC domain FFM54_RS28010 PF01883 Iron-sulfur cluster assembly protein FFM54_RS28015 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFM54_RS28025 PF00487 Fatty acid desaturase FFM54_RS28035 PF03441 FAD binding domain of DNA photolyase FFM54_RS28035 PF00875 DNA photolyase FFM54_RS28055 PF03472 Autoinducer binding domain FFM54_RS28055 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS28080 PF00221 Aromatic amino acid lyase FFM54_RS28085 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS28085 PF07702 UTRA domain FFM54_RS28090 PF17391 Urocanase N-terminal domain FFM54_RS28090 PF01175 Urocanase Rossmann-like domain FFM54_RS28090 PF17392 Urocanase C-terminal domain FFM54_RS28100 PF01979 Amidohydrolase family FFM54_RS28105 PF01979 Amidohydrolase family FFM54_RS28145 PF07722 Peptidase C26 FFM54_RS28150 PF00120 Glutamine synthetase, catalytic domain FFM54_RS28155 PF00202 Aminotransferase class-III FFM54_RS28180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS28180 PF03466 LysR substrate binding domain FFM54_RS28185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS28185 PF18158 Adaptive response protein AidB N-terminal domain FFM54_RS28185 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS28190 PF02515 CoA-transferase family III FFM54_RS28200 PF07690 Major Facilitator Superfamily FFM54_RS28200 PF00083 Sugar (and other) transporter FFM54_RS28205 PF04362 Bacterial Fe(2+) trafficking FFM54_RS28210 PF00583 Acetyltransferase (GNAT) family FFM54_RS28210 PF00696 Amino acid kinase family FFM54_RS28240 PF18146 Damage-inducible protein CinA KH domain FFM54_RS28240 PF02464 Competence-damaged protein FFM54_RS28240 PF00994 Probable molybdopterin binding domain FFM54_RS28255 PF00120 Glutamine synthetase, catalytic domain FFM54_RS28255 PF03951 Glutamine synthetase, beta-Grasp domain FFM54_RS28260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS28260 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS28260 PF00989 PAS fold FFM54_RS28265 PF02954 Bacterial regulatory protein, Fis family FFM54_RS28265 PF00072 Response regulator receiver domain FFM54_RS28265 PF00158 Sigma-54 interaction domain FFM54_RS28285 PF07730 Histidine kinase FFM54_RS28290 PF02665 Nitrate reductase gamma subunit FFM54_RS28295 PF02613 Nitrate reductase delta subunit FFM54_RS28300 PF13247 4Fe-4S dicluster domain FFM54_RS28300 PF14711 Respiratory nitrate reductase beta C-terminal FFM54_RS28305 PF14710 Respiratory nitrate reductase alpha N-terminal FFM54_RS28305 PF01568 Molydopterin dinucleotide binding domain FFM54_RS28305 PF00384 Molybdopterin oxidoreductase FFM54_RS28310 PF07690 Major Facilitator Superfamily FFM54_RS28315 PF07690 Major Facilitator Superfamily FFM54_RS28330 PF00817 impB/mucB/samB family FFM54_RS28330 PF11799 impB/mucB/samB family C-terminal domain FFM54_RS28335 PF01432 Peptidase family M3 FFM54_RS28350 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FFM54_RS28350 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FFM54_RS28355 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS28355 PF00072 Response regulator receiver domain FFM54_RS28360 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS28360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS28360 PF00989 PAS fold FFM54_RS28365 PF00456 Transketolase, thiamine diphosphate binding domain FFM54_RS28365 PF17831 Pyruvate dehydrogenase E1 component middle domain FFM54_RS28380 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS28380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFM54_RS28385 PF09361 Phasin protein FFM54_RS28395 PF00768 D-alanyl-D-alanine carboxypeptidase FFM54_RS28410 PF09339 IclR helix-turn-helix domain FFM54_RS28410 PF01614 Bacterial transcriptional regulator FFM54_RS28420 PF02754 Cysteine-rich domain FFM54_RS28425 PF11870 Domain of unknown function (DUF3390) FFM54_RS28425 PF02589 LUD domain FFM54_RS28425 PF13183 4Fe-4S dicluster domain FFM54_RS28435 PF01451 Low molecular weight phosphotyrosine protein phosphatase FFM54_RS28440 PF02082 Transcriptional regulator FFM54_RS28445 PF00266 Aminotransferase class-V FFM54_RS28450 PF01592 NifU-like N terminal domain FFM54_RS28455 PF01521 Iron-sulphur cluster biosynthesis FFM54_RS28460 PF07743 HSCB C-terminal oligomerisation domain FFM54_RS28465 PF00012 Hsp70 protein FFM54_RS28470 PF00111 2Fe-2S iron-sulfur cluster binding domain FFM54_RS28475 PF04384 Iron-sulphur cluster assembly FFM54_RS28500 PF01336 OB-fold nucleic acid binding domain FFM54_RS28500 PF00152 tRNA synthetases class II (D, K and N) FFM54_RS28510 PF02272 DHHA1 domain FFM54_RS28510 PF17768 RecJ OB domain FFM54_RS28510 PF01368 DHH family FFM54_RS28525 PF12704 MacB-like periplasmic core domain FFM54_RS28525 PF02687 FtsX-like permease family FFM54_RS28530 PF00005 ABC transporter FFM54_RS28535 PF01026 TatD related DNase FFM54_RS28545 PF08386 TAP-like protein FFM54_RS28545 PF00561 alpha/beta hydrolase fold FFM54_RS28555 PF00117 Glutamine amidotransferase class-I FFM54_RS28555 PF06418 CTP synthase N-terminus FFM54_RS28560 PF00793 DAHP synthetase I family FFM54_RS28565 PF00113 Enolase, C-terminal TIM barrel domain FFM54_RS28565 PF03952 Enolase, N-terminal domain FFM54_RS28570 PF04977 Septum formation initiator FFM54_RS28580 PF01430 Hsp33 protein FFM54_RS28585 PF00132 Bacterial transferase hexapeptide (six repeats) FFM54_RS28590 PF04305 Protein of unknown function (DUF455) FFM54_RS28600 PF00561 alpha/beta hydrolase fold FFM54_RS28610 PF02811 PHP domain FFM54_RS28615 PF01300 Telomere recombination FFM54_RS28620 PF02163 Peptidase family M50 FFM54_RS28625 PF00579 tRNA synthetases class I (W and Y) FFM54_RS28635 PF00701 Dihydrodipicolinate synthetase family FFM54_RS28640 PF06804 NlpB/DapX lipoprotein FFM54_RS28645 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FFM54_RS28645 PF10996 Beta-Casp domain FFM54_RS28645 PF00753 Metallo-beta-lactamase superfamily FFM54_RS28660 PF08007 Cupin superfamily protein FFM54_RS28665 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFM54_RS28675 PF01624 MutS domain I FFM54_RS28675 PF05188 MutS domain II FFM54_RS28675 PF05190 MutS family domain IV FFM54_RS28675 PF00488 MutS domain V FFM54_RS28675 PF05192 MutS domain III FFM54_RS28705 PF00459 Inositol monophosphatase family FFM54_RS28715 PF00588 SpoU rRNA Methylase family FFM54_RS28720 PF00132 Bacterial transferase hexapeptide (six repeats) FFM54_RS28730 PF00149 Calcineurin-like phosphoesterase FFM54_RS28735 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FFM54_RS28740 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FFM54_RS28750 PF01406 tRNA synthetases class I (C) catalytic domain FFM54_RS28750 PF09190 DALR domain FFM54_RS28760 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FFM54_RS28765 PF01171 PP-loop family FFM54_RS28765 PF11734 TilS substrate C-terminal domain FFM54_RS28765 PF09179 TilS substrate binding domain FFM54_RS28775 PF13840 ACT domain FFM54_RS28775 PF01842 ACT domain FFM54_RS28775 PF00696 Amino acid kinase family FFM54_RS28810 PF00873 AcrB/AcrD/AcrF family FFM54_RS28815 PF13533 Biotin-lipoyl like FFM54_RS28830 PF03737 Aldolase/RraA FFM54_RS28845 PF01274 Malate synthase FFM54_RS28850 PF13419 Haloacid dehalogenase-like hydrolase FFM54_RS28855 PF03466 LysR substrate binding domain FFM54_RS28855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS28860 PF00582 Universal stress protein family FFM54_RS28865 PF00463 Isocitrate lyase family FFM54_RS28875 PF00271 Helicase conserved C-terminal domain FFM54_RS28875 PF00270 DEAD/DEAH box helicase FFM54_RS28895 PF03167 Uracil DNA glycosylase superfamily FFM54_RS28910 PF08543 Phosphomethylpyrimidine kinase FFM54_RS28915 PF07690 Major Facilitator Superfamily FFM54_RS28920 PF00842 Alanine racemase, C-terminal domain FFM54_RS28920 PF01168 Alanine racemase, N-terminal domain FFM54_RS28925 PF18073 Rubredoxin metal binding domain FFM54_RS28935 PF00005 ABC transporter FFM54_RS28935 PF12848 ABC transporter FFM54_RS28940 PF00255 Glutathione peroxidase FFM54_RS28945 PF13091 PLD-like domain FFM54_RS28955 PF05175 Methyltransferase small domain FFM54_RS28960 PF07687 Peptidase dimerisation domain FFM54_RS28960 PF01546 Peptidase family M20/M25/M40 FFM54_RS28965 PF03960 ArsC family FFM54_RS28970 PF00132 Bacterial transferase hexapeptide (six repeats) FFM54_RS28970 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FFM54_RS28970 PF14602 Hexapeptide repeat of succinyl-transferase FFM54_RS28975 PF00155 Aminotransferase class I and II FFM54_RS28990 PF06470 SMC proteins Flexible Hinge Domain FFM54_RS28990 PF02463 RecF/RecN/SMC N terminal domain FFM54_RS29005 PF12826 Helix-hairpin-helix motif FFM54_RS29005 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FFM54_RS29005 PF00533 BRCA1 C Terminus (BRCT) domain FFM54_RS29005 PF03120 NAD-dependent DNA ligase OB-fold domain FFM54_RS29005 PF01653 NAD-dependent DNA ligase adenylation domain FFM54_RS29010 PF01327 Polypeptide deformylase FFM54_RS29015 PF00849 RNA pseudouridylate synthase FFM54_RS29015 PF01479 S4 domain FFM54_RS29020 PF01909 Nucleotidyltransferase domain FFM54_RS29020 PF01966 HD domain FFM54_RS29020 PF08335 GlnD PII-uridylyltransferase FFM54_RS29035 PF00318 Ribosomal protein S2 FFM54_RS29040 PF00889 Elongation factor TS FFM54_RS29045 PF00696 Amino acid kinase family FFM54_RS29050 PF01765 Ribosome recycling factor FFM54_RS29055 PF01255 Putative undecaprenyl diphosphate synthase FFM54_RS29065 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FFM54_RS29065 PF13288 DXP reductoisomerase C-terminal domain FFM54_RS29065 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FFM54_RS29070 PF02163 Peptidase family M50 FFM54_RS29070 PF17820 PDZ domain FFM54_RS29075 PF07244 Surface antigen variable number repeat FFM54_RS29075 PF01103 Surface antigen FFM54_RS29085 PF00132 Bacterial transferase hexapeptide (six repeats) FFM54_RS29085 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FFM54_RS29090 PF07977 FabA-like domain FFM54_RS29095 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FFM54_RS29095 PF00132 Bacterial transferase hexapeptide (six repeats) FFM54_RS29100 PF02684 Lipid-A-disaccharide synthetase FFM54_RS29105 PF01351 Ribonuclease HII FFM54_RS29110 PF08032 RNA 2'-O ribose methyltransferase substrate binding FFM54_RS29110 PF00588 SpoU rRNA Methylase family FFM54_RS29120 PF03618 Kinase/pyrophosphorylase FFM54_RS29130 PF00082 Subtilase family FFM54_RS29130 PF09286 Pro-kumamolisin, activation domain FFM54_RS29150 PF02896 PEP-utilising enzyme, TIM barrel domain FFM54_RS29150 PF00391 PEP-utilising enzyme, mobile domain FFM54_RS29150 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FFM54_RS29160 PF01145 SPFH domain / Band 7 family FFM54_RS29160 PF16200 C-terminal region of band_7 FFM54_RS29165 PF01668 SmpB protein FFM54_RS29170 PF03364 Polyketide cyclase / dehydrase and lipid transport FFM54_RS29175 PF03658 RnfH family Ubiquitin FFM54_RS29180 PF00892 EamA-like transporter family FFM54_RS29205 PF00478 IMP dehydrogenase / GMP reductase domain FFM54_RS29205 PF00571 CBS domain FFM54_RS29215 PF00958 GMP synthase C terminal domain FFM54_RS29215 PF02540 NAD synthase FFM54_RS29215 PF00117 Glutamine amidotransferase class-I FFM54_RS29220 PF13356 Arm DNA-binding domain FFM54_RS29220 PF00589 Phage integrase family FFM54_RS29305 PF07690 Major Facilitator Superfamily FFM54_RS29335 PF09350 Domain of unknown function (DUF1992) FFM54_RS29340 PF14437 MafB19-like deaminase FFM54_RS29345 PF02016 LD-carboxypeptidase N-terminal domain FFM54_RS29345 PF17676 LD-carboxypeptidase C-terminal domain FFM54_RS29350 PF07729 FCD domain FFM54_RS29350 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS29355 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FFM54_RS29360 PF01177 Asp/Glu/Hydantoin racemase FFM54_RS29370 PF09349 OHCU decarboxylase FFM54_RS29370 PF01014 Uricase FFM54_RS29375 PF03561 Allantoicase repeat FFM54_RS29380 PF04115 Ureidoglycolate lyase FFM54_RS29390 PF00576 HIUase/Transthyretin family FFM54_RS29400 PF01979 Amidohydrolase family FFM54_RS29405 PF03466 LysR substrate binding domain FFM54_RS29405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS29415 PF07311 Dodecin FFM54_RS29420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FFM54_RS29420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFM54_RS29430 PF01741 Large-conductance mechanosensitive channel, MscL FFM54_RS29450 PF00905 Penicillin binding protein transpeptidase domain FFM54_RS29450 PF17092 Penicillin-binding protein OB-like domain FFM54_RS29450 PF00912 Transglycosylase FFM54_RS29475 PF00291 Pyridoxal-phosphate dependent enzyme FFM54_RS29480 PF01546 Peptidase family M20/M25/M40 FFM54_RS29480 PF07687 Peptidase dimerisation domain FFM54_RS29510 PF17757 UvrB interaction domain FFM54_RS29510 PF03461 TRCF domain FFM54_RS29510 PF00271 Helicase conserved C-terminal domain FFM54_RS29510 PF00270 DEAD/DEAH box helicase FFM54_RS29510 PF02559 CarD-like/TRCF domain FFM54_RS29515 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FFM54_RS29520 PF02542 YgbB family FFM54_RS29525 PF02627 Carboxymuconolactone decarboxylase family FFM54_RS29530 PF00578 AhpC/TSA family FFM54_RS29535 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS29535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS29535 PF00672 HAMP domain FFM54_RS29540 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS29540 PF00072 Response regulator receiver domain FFM54_RS29655 PF00850 Histone deacetylase domain FFM54_RS29665 PF00267 Gram-negative porin FFM54_RS29680 PF08546 Ketopantoate reductase PanE/ApbA C terminal FFM54_RS29680 PF02558 Ketopantoate reductase PanE/ApbA FFM54_RS29690 PF01047 MarR family FFM54_RS29695 PF02595 Glycerate kinase family FFM54_RS29710 PF05698 Bacterial trigger factor protein (TF) C-terminus FFM54_RS29710 PF05697 Bacterial trigger factor protein (TF) FFM54_RS29710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFM54_RS29715 PF00574 Clp protease FFM54_RS29720 PF06689 ClpX C4-type zinc finger FFM54_RS29720 PF07724 AAA domain (Cdc48 subfamily) FFM54_RS29720 PF10431 C-terminal, D2-small domain, of ClpB protein FFM54_RS29725 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS29725 PF02190 ATP-dependent protease La (LON) substrate-binding domain FFM54_RS29725 PF05362 Lon protease (S16) C-terminal proteolytic domain FFM54_RS29795 PF13472 GDSL-like Lipase/Acylhydrolase family FFM54_RS29800 PF00005 ABC transporter FFM54_RS29810 PF00342 Phosphoglucose isomerase FFM54_RS29820 PF01266 FAD dependent oxidoreductase FFM54_RS29830 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FFM54_RS29830 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FFM54_RS29830 PF02769 AIR synthase related protein, C-terminal domain FFM54_RS29845 PF01722 BolA-like protein FFM54_RS29850 PF04279 Intracellular septation protein A FFM54_RS29855 PF01641 SelR domain FFM54_RS29860 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FFM54_RS29865 PF00501 AMP-binding enzyme FFM54_RS29865 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS29875 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FFM54_RS29875 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS29875 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FFM54_RS29880 PF00857 Isochorismatase family FFM54_RS29885 PF00108 Thiolase, N-terminal domain FFM54_RS29885 PF02803 Thiolase, C-terminal domain FFM54_RS29920 PF16884 N-terminal domain of oxidoreductase FFM54_RS29920 PF00107 Zinc-binding dehydrogenase FFM54_RS29925 PF07859 alpha/beta hydrolase fold FFM54_RS29930 PF13673 Acetyltransferase (GNAT) domain FFM54_RS29940 PF01571 Aminomethyltransferase folate-binding domain FFM54_RS29945 PF02618 YceG-like family FFM54_RS29950 PF02223 Thymidylate kinase FFM54_RS29955 PF09115 DNA polymerase III, delta subunit, C terminal FFM54_RS29960 PF00583 Acetyltransferase (GNAT) family FFM54_RS29965 PF01026 TatD related DNase FFM54_RS29995 PF00534 Glycosyl transferases group 1 FFM54_RS29995 PF13439 Glycosyltransferase Family 4 FFM54_RS30030 PF00710 Asparaginase, N-terminal FFM54_RS30030 PF17763 Glutaminase/Asparaginase C-terminal domain FFM54_RS30040 PF04972 BON domain FFM54_RS30040 PF01476 LysM domain FFM54_RS30050 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FFM54_RS30050 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FFM54_RS30055 PF01261 Xylose isomerase-like TIM barrel FFM54_RS30060 PF00205 Thiamine pyrophosphate enzyme, central domain FFM54_RS30060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFM54_RS30060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFM54_RS30065 PF03466 LysR substrate binding domain FFM54_RS30065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS30090 PF01250 Ribosomal protein S6 FFM54_RS30100 PF01084 Ribosomal protein S18 FFM54_RS30105 PF03948 Ribosomal protein L9, C-terminal domain FFM54_RS30105 PF01281 Ribosomal protein L9, N-terminal domain FFM54_RS30115 PF00772 DnaB-like helicase N terminal domain FFM54_RS30115 PF03796 DnaB-like helicase C terminal domain FFM54_RS30125 PF01384 Phosphate transporter family FFM54_RS30140 PF02562 PhoH-like protein FFM54_RS30140 PF13638 PIN domain FFM54_RS30150 PF00578 AhpC/TSA family FFM54_RS30155 PF01522 Polysaccharide deacetylase FFM54_RS30160 PF02911 Formyl transferase, C-terminal domain FFM54_RS30160 PF00551 Formyl transferase FFM54_RS30160 PF01370 NAD dependent epimerase/dehydratase family FFM54_RS30165 PF01370 NAD dependent epimerase/dehydratase family FFM54_RS30165 PF00551 Formyl transferase FFM54_RS30165 PF02911 Formyl transferase, C-terminal domain FFM54_RS30170 PF00535 Glycosyl transferase family 2 FFM54_RS30175 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FFM54_RS30185 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FFM54_RS30200 PF00155 Aminotransferase class I and II FFM54_RS30205 PF00742 Homoserine dehydrogenase FFM54_RS30205 PF01842 ACT domain FFM54_RS30205 PF03447 Homoserine dehydrogenase, NAD binding domain FFM54_RS30210 PF00291 Pyridoxal-phosphate dependent enzyme FFM54_RS30210 PF14821 Threonine synthase N terminus FFM54_RS30225 PF00994 Probable molybdopterin binding domain FFM54_RS30225 PF03454 MoeA C-terminal region (domain IV) FFM54_RS30225 PF03453 MoeA N-terminal region (domain I and II) FFM54_RS30230 PF02597 ThiS family FFM54_RS30235 PF02391 MoaE protein FFM54_RS30240 PF01152 Bacterial-like globin FFM54_RS30245 PF02082 Transcriptional regulator FFM54_RS30250 PF17871 AAA lid domain FFM54_RS30250 PF10431 C-terminal, D2-small domain, of ClpB protein FFM54_RS30250 PF02861 Clp amino terminal domain, pathogenicity island component FFM54_RS30250 PF07724 AAA domain (Cdc48 subfamily) FFM54_RS30250 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS30280 PF01554 MatE FFM54_RS30300 PF01197 Ribosomal protein L31 FFM54_RS30305 PF06167 Glucose-regulated metallo-peptidase M90 FFM54_RS30310 PF07690 Major Facilitator Superfamily FFM54_RS30315 PF13411 MerR HTH family regulatory protein FFM54_RS30320 PF07498 Rho termination factor, N-terminal domain FFM54_RS30320 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FFM54_RS30320 PF07497 Rho termination factor, RNA-binding domain FFM54_RS30330 PF00085 Thioredoxin FFM54_RS30350 PF02575 YbaB/EbfC DNA-binding family FFM54_RS30355 PF13662 Toprim domain FFM54_RS30355 PF02132 RecR protein FFM54_RS30360 PF02515 CoA-transferase family III FFM54_RS30365 PF01975 Survival protein SurE FFM54_RS30375 PF01551 Peptidase family M23 FFM54_RS30375 PF01476 LysM domain FFM54_RS30380 PF04545 Sigma-70, region 4 FFM54_RS30380 PF00140 Sigma-70 factor, region 1.2 FFM54_RS30380 PF04542 Sigma-70 region 2 FFM54_RS30380 PF04539 Sigma-70 region 3 FFM54_RS30400 PF05958 tRNA (Uracil-5-)-methyltransferase FFM54_RS30405 PF01027 Inhibitor of apoptosis-promoting Bax1 FFM54_RS30410 PF00334 Nucleoside diphosphate kinase FFM54_RS30415 PF04055 Radical SAM superfamily FFM54_RS30425 PF04551 GcpE protein FFM54_RS30430 PF03129 Anticodon binding domain FFM54_RS30430 PF13393 Histidyl-tRNA synthetase FFM54_RS30435 PF09976 Tetratricopeptide repeat-like domain FFM54_RS30440 PF13360 PQQ-like domain FFM54_RS30445 PF01926 50S ribosome-binding GTPase FFM54_RS30445 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FFM54_RS30450 PF17209 Hfq protein FFM54_RS30455 PF16360 GTP-binding GTPase Middle Region FFM54_RS30455 PF13167 GTP-binding GTPase N-terminal FFM54_RS30455 PF01926 50S ribosome-binding GTPase FFM54_RS30465 PF01145 SPFH domain / Band 7 family FFM54_RS30475 PF13393 Histidyl-tRNA synthetase FFM54_RS30485 PF00709 Adenylosuccinate synthetase FFM54_RS30490 PF00156 Phosphoribosyl transferase domain FFM54_RS30500 PF02705 K+ potassium transporter FFM54_RS30515 PF17674 HHH domain FFM54_RS30515 PF00575 S1 RNA binding domain FFM54_RS30515 PF09371 Tex-like protein N-terminal domain FFM54_RS30515 PF16921 Tex protein YqgF-like domain FFM54_RS30535 PF13525 Outer membrane lipoprotein FFM54_RS30540 PF00849 RNA pseudouridylate synthase FFM54_RS30540 PF01479 S4 domain FFM54_RS30550 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FFM54_RS30555 PF02803 Thiolase, C-terminal domain FFM54_RS30555 PF00108 Thiolase, N-terminal domain FFM54_RS30560 PF00106 short chain dehydrogenase FFM54_RS30565 PF07879 PHB/PHA accumulation regulator DNA-binding domain FFM54_RS30565 PF05233 PHB accumulation regulatory domain FFM54_RS30575 PF18693 TRAM domain FFM54_RS30575 PF04055 Radical SAM superfamily FFM54_RS30575 PF00919 Uncharacterized protein family UPF0004 FFM54_RS30580 PF00294 pfkB family carbohydrate kinase FFM54_RS30585 PF02803 Thiolase, C-terminal domain FFM54_RS30585 PF00108 Thiolase, N-terminal domain FFM54_RS30595 PF01053 Cys/Met metabolism PLP-dependent enzyme FFM54_RS30620 PF03649 Uncharacterised protein family (UPF0014) FFM54_RS30625 PF00005 ABC transporter FFM54_RS30640 PF12848 ABC transporter FFM54_RS30640 PF00005 ABC transporter FFM54_RS30655 PF00171 Aldehyde dehydrogenase family FFM54_RS30660 PF03060 Nitronate monooxygenase FFM54_RS30665 PF03922 OmpW family FFM54_RS30680 PF01566 Natural resistance-associated macrophage protein FFM54_RS30685 PF13416 Bacterial extracellular solute-binding protein FFM54_RS30690 PF08402 TOBE domain FFM54_RS30690 PF00005 ABC transporter FFM54_RS30695 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS30700 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS30705 PF01925 Sulfite exporter TauE/SafE FFM54_RS30715 PF00753 Metallo-beta-lactamase superfamily FFM54_RS30720 PF02954 Bacterial regulatory protein, Fis family FFM54_RS30720 PF00158 Sigma-54 interaction domain FFM54_RS30720 PF00072 Response regulator receiver domain FFM54_RS30730 PF13443 Cro/C1-type HTH DNA-binding domain FFM54_RS30760 PF02321 Outer membrane efflux protein FFM54_RS30765 PF00873 AcrB/AcrD/AcrF family FFM54_RS30775 PF08361 MAATS-type transcriptional repressor, C-terminal region FFM54_RS30775 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS30780 PF00654 Voltage gated chloride channel FFM54_RS30785 PF03601 Conserved hypothetical protein 698 FFM54_RS30790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS30790 PF03466 LysR substrate binding domain FFM54_RS30805 PF00294 pfkB family carbohydrate kinase FFM54_RS30810 PF07690 Major Facilitator Superfamily FFM54_RS30815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFM54_RS30815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFM54_RS30825 PF00356 Bacterial regulatory proteins, lacI family FFM54_RS30910 PF01544 CorA-like Mg2+ transporter protein FFM54_RS30950 PF12795 Mechanosensitive ion channel porin domain FFM54_RS30950 PF12794 Mechanosensitive ion channel inner membrane domain 1 FFM54_RS30950 PF00924 Mechanosensitive ion channel FFM54_RS30960 PF12801 4Fe-4S binding domain FFM54_RS30960 PF04205 FMN-binding domain FFM54_RS30985 PF12679 ABC-2 family transporter protein FFM54_RS30990 PF00005 ABC transporter FFM54_RS30995 PF05048 Periplasmic copper-binding protein (NosD) FFM54_RS31000 PF13473 Cupredoxin-like domain FFM54_RS31000 PF18793 Nitrous oxide reductase propeller repeat 2 FFM54_RS31000 PF18764 Nitrous oxide reductase propeller repeat FFM54_RS31010 PF02424 ApbE family FFM54_RS31015 PF00005 ABC transporter FFM54_RS31025 PF02203 Tar ligand binding domain homologue FFM54_RS31025 PF00672 HAMP domain FFM54_RS31025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS31045 PF00355 Rieske [2Fe-2S] domain FFM54_RS31050 PF00355 Rieske [2Fe-2S] domain FFM54_RS31055 PF00999 Sodium/hydrogen exchanger family FFM54_RS31060 PF04820 Tryptophan halogenase FFM54_RS31080 PF00465 Iron-containing alcohol dehydrogenase FFM54_RS31140 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FFM54_RS31140 PF02753 Pili assembly chaperone PapD, C-terminal domain FFM54_RS31145 PF13953 PapC C-terminal domain FFM54_RS31145 PF13954 PapC N-terminal domain FFM54_RS31145 PF00577 Outer membrane usher protein FFM54_RS31165 PF05662 Coiled stalk of trimeric autotransporter adhesin FFM54_RS31165 PF05658 Head domain of trimeric autotransporter adhesin FFM54_RS31165 PF03895 YadA-like membrane anchor domain FFM54_RS31165 PF13018 Extended Signal Peptide of Type V secretion system FFM54_RS31205 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS31205 PF00072 Response regulator receiver domain FFM54_RS31210 PF09456 RcsC Alpha-Beta-Loop (ABL) FFM54_RS31210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS31210 PF00072 Response regulator receiver domain FFM54_RS31210 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS31275 PF01613 Flavin reductase like domain FFM54_RS31280 PF00296 Luciferase-like monooxygenase FFM54_RS31300 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS31310 PF00005 ABC transporter FFM54_RS31310 PF08402 TOBE domain FFM54_RS31320 PF00171 Aldehyde dehydrogenase family FFM54_RS31325 PF13609 Gram-negative porin FFM54_RS31345 PF00816 H-NS histone family FFM54_RS31350 PF00691 OmpA family FFM54_RS31350 PF01389 OmpA-like transmembrane domain FFM54_RS31375 PF00005 ABC transporter FFM54_RS31375 PF03412 Peptidase C39 family FFM54_RS31375 PF00664 ABC transporter transmembrane region FFM54_RS31380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFM54_RS31380 PF00529 HlyD membrane-fusion protein of T1SS FFM54_RS31405 PF00072 Response regulator receiver domain FFM54_RS31405 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS31415 PF02371 Transposase IS116/IS110/IS902 family FFM54_RS31415 PF01548 Transposase FFM54_RS31440 PF13609 Gram-negative porin FFM54_RS31450 PF00221 Aromatic amino acid lyase FFM54_RS31455 PF07690 Major Facilitator Superfamily FFM54_RS31460 PF17391 Urocanase N-terminal domain FFM54_RS31460 PF17392 Urocanase C-terminal domain FFM54_RS31460 PF01175 Urocanase Rossmann-like domain FFM54_RS31470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS31470 PF03466 LysR substrate binding domain FFM54_RS31475 PF01979 Amidohydrolase family FFM54_RS31480 PF07687 Peptidase dimerisation domain FFM54_RS31480 PF01546 Peptidase family M20/M25/M40 FFM54_RS31485 PF00581 Rhodanese-like domain FFM54_RS31500 PF04542 Sigma-70 region 2 FFM54_RS31500 PF08281 Sigma-70, region 4 FFM54_RS31505 PF06532 Negative regulator of sigma F FFM54_RS31525 PF05114 Protein of unknown function (DUF692) FFM54_RS31555 PF01804 Penicillin amidase FFM54_RS31560 PF16861 Carbamoyltransferase C-terminus FFM54_RS31560 PF02543 Carbamoyltransferase N-terminus FFM54_RS31575 PF01212 Beta-eliminating lyase FFM54_RS31585 PF00291 Pyridoxal-phosphate dependent enzyme FFM54_RS31605 PF00206 Lyase FFM54_RS31605 PF14698 Argininosuccinate lyase C-terminal FFM54_RS31610 PF00764 Arginosuccinate synthase FFM54_RS31615 PF00551 Formyl transferase FFM54_RS31615 PF18216 N-formyltransferase dimerization C-terminal domain FFM54_RS31625 PF00155 Aminotransferase class I and II FFM54_RS31635 PF03621 MbtH-like protein FFM54_RS31645 PF03621 MbtH-like protein FFM54_RS31670 PF13609 Gram-negative porin FFM54_RS31680 PF12852 Cupin FFM54_RS31680 PF12833 Helix-turn-helix domain FFM54_RS31690 PF00892 EamA-like transporter family FFM54_RS31695 PF01584 CheW-like domain FFM54_RS31700 PF02203 Tar ligand binding domain homologue FFM54_RS31700 PF00672 HAMP domain FFM54_RS31700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS31725 PF07690 Major Facilitator Superfamily FFM54_RS31735 PF13649 Methyltransferase domain FFM54_RS31745 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FFM54_RS31750 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS31780 PF13520 Amino acid permease FFM54_RS31790 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FFM54_RS31790 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FFM54_RS31795 PF00696 Amino acid kinase family FFM54_RS31805 PF00561 alpha/beta hydrolase fold FFM54_RS31805 PF00106 short chain dehydrogenase FFM54_RS31810 PF03928 Haem-degrading FFM54_RS31815 PF03466 LysR substrate binding domain FFM54_RS31815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS31820 PF02798 Glutathione S-transferase, N-terminal domain FFM54_RS31820 PF00043 Glutathione S-transferase, C-terminal domain FFM54_RS31835 PF13458 Periplasmic binding protein FFM54_RS31840 PF01047 MarR family FFM54_RS31850 PF02638 Glycosyl hydrolase-like 10 FFM54_RS31855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFM54_RS31870 PF01888 CbiD FFM54_RS31875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFM54_RS31885 PF02570 Precorrin-8X methylmutase FFM54_RS31890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFM54_RS31900 PF02839 Carbohydrate binding domain FFM54_RS31920 PF02230 Phospholipase/Carboxylesterase FFM54_RS31950 PF07683 Cobalamin synthesis protein cobW C-terminal domain FFM54_RS31950 PF02492 CobW/HypB/UreG, nucleotide-binding domain FFM54_RS31955 PF03824 High-affinity nickel-transport protein FFM54_RS31965 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FFM54_RS31965 PF12557 Cob(I)alamin adenosyltransferase N terminal FFM54_RS31970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FFM54_RS31970 PF07685 CobB/CobQ-like glutamine amidotransferase domain FFM54_RS31980 PF00551 Formyl transferase FFM54_RS31985 PF00593 TonB dependent receptor FFM54_RS31985 PF07715 TonB-dependent Receptor Plug Domain FFM54_RS31990 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FFM54_RS32010 PF00005 ABC transporter FFM54_RS32010 PF00664 ABC transporter transmembrane region FFM54_RS32020 PF01497 Periplasmic binding protein FFM54_RS32035 PF00005 ABC transporter FFM54_RS32045 PF03621 MbtH-like protein FFM54_RS32075 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS32075 PF00107 Zinc-binding dehydrogenase FFM54_RS32085 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS32090 PF00005 ABC transporter FFM54_RS32130 PF04285 Protein of unknown function (DUF444) FFM54_RS32135 PF06798 PrkA serine protein kinase C-terminal domain FFM54_RS32135 PF08298 PrkA AAA domain FFM54_RS32155 PF00356 Bacterial regulatory proteins, lacI family FFM54_RS32165 PF00005 ABC transporter FFM54_RS32170 PF13407 Periplasmic binding protein domain FFM54_RS32175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS32175 PF03466 LysR substrate binding domain FFM54_RS32180 PF12857 TOBE-like domain FFM54_RS32180 PF00005 ABC transporter FFM54_RS32185 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS32190 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS32205 PF01726 LexA DNA binding domain FFM54_RS32205 PF00717 Peptidase S24-like FFM54_RS32230 PF00005 ABC transporter FFM54_RS32235 PF01061 ABC-2 type transporter FFM54_RS32245 PF03773 Predicted permease FFM54_RS32250 PF00248 Aldo/keto reductase family FFM54_RS32260 PF01638 HxlR-like helix-turn-helix FFM54_RS32280 PF00375 Sodium:dicarboxylate symporter family FFM54_RS32290 PF01207 Dihydrouridine synthase (Dus) FFM54_RS32315 PF03459 TOBE domain FFM54_RS32330 PF00296 Luciferase-like monooxygenase FFM54_RS32345 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS32350 PF00893 Small Multidrug Resistance protein FFM54_RS32355 PF03928 Haem-degrading FFM54_RS32370 PF09297 NADH pyrophosphatase zinc ribbon domain FFM54_RS32370 PF00293 NUDIX domain FFM54_RS32375 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FFM54_RS32380 PF04377 Arginine-tRNA-protein transferase, C terminus FFM54_RS32380 PF04376 Arginine-tRNA-protein transferase, N terminus FFM54_RS32385 PF01180 Dihydroorotate dehydrogenase FFM54_RS32390 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS32395 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS32400 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFM54_RS32400 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFM54_RS32405 PF07729 FCD domain FFM54_RS32405 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS32410 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FFM54_RS32415 PF01510 N-acetylmuramoyl-L-alanine amidase FFM54_RS32425 PF00588 SpoU rRNA Methylase family FFM54_RS32425 PF08032 RNA 2'-O ribose methyltransferase substrate binding FFM54_RS32430 PF00575 S1 RNA binding domain FFM54_RS32430 PF08206 Ribonuclease B OB domain FFM54_RS32430 PF08461 Ribonuclease R winged-helix domain FFM54_RS32430 PF00773 RNB domain FFM54_RS32430 PF17876 Cold shock domain FFM54_RS32445 PF02203 Tar ligand binding domain homologue FFM54_RS32445 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS32445 PF00672 HAMP domain FFM54_RS32450 PF04185 Phosphoesterase family FFM54_RS32465 PF01740 STAS domain FFM54_RS32465 PF00916 Sulfate permease family FFM54_RS32475 PF00117 Glutamine amidotransferase class-I FFM54_RS32475 PF13302 Acetyltransferase (GNAT) domain FFM54_RS32475 PF03352 Methyladenine glycosylase FFM54_RS32475 PF00958 GMP synthase C terminal domain FFM54_RS32475 PF13673 Acetyltransferase (GNAT) domain FFM54_RS32485 PF07690 Major Facilitator Superfamily FFM54_RS32490 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS32495 PF00501 AMP-binding enzyme FFM54_RS32495 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS32515 PF17209 Hfq protein FFM54_RS32525 PF02954 Bacterial regulatory protein, Fis family FFM54_RS32525 PF00072 Response regulator receiver domain FFM54_RS32525 PF00158 Sigma-54 interaction domain FFM54_RS32555 PF00437 Type II/IV secretion system protein FFM54_RS32565 PF04972 BON domain FFM54_RS32565 PF00263 Bacterial type II and III secretion system protein FFM54_RS32565 PF13629 Pilus formation protein N terminal region FFM54_RS32625 PF03969 AFG1-like ATPase FFM54_RS32630 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FFM54_RS32630 PF07992 Pyridine nucleotide-disulphide oxidoreductase FFM54_RS32640 PF00676 Dehydrogenase E1 component FFM54_RS32640 PF16078 2-oxoglutarate dehydrogenase N-terminus FFM54_RS32640 PF16870 2-oxoglutarate dehydrogenase C-terminal FFM54_RS32640 PF02779 Transketolase, pyrimidine binding domain FFM54_RS32645 PF00009 Elongation factor Tu GTP binding domain FFM54_RS32645 PF03144 Elongation factor Tu domain 2 FFM54_RS32645 PF00679 Elongation factor G C-terminus FFM54_RS32655 PF01047 MarR family FFM54_RS32660 PF02321 Outer membrane efflux protein FFM54_RS32665 PF00529 HlyD membrane-fusion protein of T1SS FFM54_RS32665 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFM54_RS32670 PF07690 Major Facilitator Superfamily FFM54_RS32680 PF16198 tRNA pseudouridylate synthase B C-terminal domain FFM54_RS32680 PF09157 Pseudouridine synthase II TruB, C-terminal FFM54_RS32680 PF01509 TruB family pseudouridylate synthase (N terminal domain) FFM54_RS32685 PF02033 Ribosome-binding factor A FFM54_RS32695 PF08529 NusA N-terminal domain FFM54_RS32695 PF13184 NusA-like KH domain FFM54_RS32700 PF02576 RimP N-terminal domain FFM54_RS32700 PF17384 RimP C-terminal SH3 domain FFM54_RS32710 PF04079 Segregation and condensation complex subunit ScpB FFM54_RS32715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS32715 PF03466 LysR substrate binding domain FFM54_RS32765 PF06804 NlpB/DapX lipoprotein FFM54_RS32790 PF01757 Acyltransferase family FFM54_RS32805 PF00216 Bacterial DNA-binding protein FFM54_RS32810 PF03483 B3/4 domain FFM54_RS32810 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FFM54_RS32810 PF01588 Putative tRNA binding domain FFM54_RS32810 PF03484 tRNA synthetase B5 domain FFM54_RS32810 PF03147 Ferredoxin-fold anticodon binding domain FFM54_RS32815 PF01409 tRNA synthetases class II core domain (F) FFM54_RS32815 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FFM54_RS32820 PF00453 Ribosomal protein L20 FFM54_RS32825 PF01632 Ribosomal protein L35 FFM54_RS32830 PF00707 Translation initiation factor IF-3, C-terminal domain FFM54_RS32830 PF05198 Translation initiation factor IF-3, N-terminal domain FFM54_RS32835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FFM54_RS32835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FFM54_RS32835 PF03129 Anticodon binding domain FFM54_RS32835 PF02824 TGS domain FFM54_RS32845 PF02824 TGS domain FFM54_RS32845 PF13291 ACT domain FFM54_RS32845 PF04607 Region found in RelA / SpoT proteins FFM54_RS32850 PF01042 Endoribonuclease L-PSP FFM54_RS32855 PF12146 Serine aminopeptidase, S33 FFM54_RS32865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS32865 PF03466 LysR substrate binding domain FFM54_RS32890 PF01144 Coenzyme A transferase FFM54_RS32895 PF01144 Coenzyme A transferase FFM54_RS32950 PF01264 Chorismate synthase FFM54_RS32960 PF07690 Major Facilitator Superfamily FFM54_RS32985 PF03631 Virulence factor BrkB FFM54_RS32990 PF03358 NADPH-dependent FMN reductase FFM54_RS33000 PF02913 FAD linked oxidases, C-terminal domain FFM54_RS33000 PF01565 FAD binding domain FFM54_RS33015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS33015 PF03466 LysR substrate binding domain FFM54_RS33030 PF04632 Fusaric acid resistance protein family FFM54_RS33040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFM54_RS33045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FFM54_RS33045 PF02203 Tar ligand binding domain homologue FFM54_RS33045 PF00672 HAMP domain FFM54_RS33050 PF07690 Major Facilitator Superfamily FFM54_RS33055 PF01048 Phosphorylase superfamily FFM54_RS33060 PF13361 UvrD-like helicase C-terminal domain FFM54_RS33060 PF00580 UvrD/REP helicase N-terminal domain FFM54_RS33065 PF08264 Anticodon-binding domain of tRNA FFM54_RS33065 PF10458 Valyl tRNA synthetase tRNA binding arm FFM54_RS33065 PF00133 tRNA synthetases class I (I, L, M and V) FFM54_RS33070 PF00483 Nucleotidyl transferase FFM54_RS33080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS33080 PF14827 Double sensory domain of two-component sensor kinase FFM54_RS33080 PF00672 HAMP domain FFM54_RS33080 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS33080 PF13426 PAS domain FFM54_RS33090 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS33090 PF00072 Response regulator receiver domain FFM54_RS33100 PF01206 Sulfurtransferase TusA FFM54_RS33110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFM54_RS33110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFM54_RS33115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FFM54_RS33115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FFM54_RS33120 PF01418 Helix-turn-helix domain, rpiR family FFM54_RS33120 PF01380 SIS domain FFM54_RS33130 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS33135 PF00005 ABC transporter FFM54_RS33140 PF00294 pfkB family carbohydrate kinase FFM54_RS33150 PF01261 Xylose isomerase-like TIM barrel FFM54_RS33155 PF04962 KduI/IolB family FFM54_RS33170 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS33175 PF03061 Thioesterase superfamily FFM54_RS33185 PF00465 Iron-containing alcohol dehydrogenase FFM54_RS33195 PF01906 Putative heavy-metal-binding FFM54_RS33200 PF00293 NUDIX domain FFM54_RS33200 PF09297 NADH pyrophosphatase zinc ribbon domain FFM54_RS33215 PF13180 PDZ domain FFM54_RS33225 PF06779 Uncharacterised MFS-type transporter YbfB FFM54_RS33230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS33230 PF03466 LysR substrate binding domain FFM54_RS33235 PF02272 DHHA1 domain FFM54_RS33235 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FFM54_RS33235 PF01411 tRNA synthetases class II (A) FFM54_RS33240 PF02515 CoA-transferase family III FFM54_RS33250 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FFM54_RS33250 PF00749 tRNA synthetases class I (E and Q), catalytic domain FFM54_RS33260 PF00293 NUDIX domain FFM54_RS33275 PF00933 Glycosyl hydrolase family 3 N terminal domain FFM54_RS33290 PF00034 Cytochrome c FFM54_RS33290 PF03150 Di-haem cytochrome c peroxidase FFM54_RS33295 PF04185 Phosphoesterase family FFM54_RS33295 PF05506 Domain of unknown function (DUF756) FFM54_RS33300 PF07055 Enoyl reductase FAD binding domain FFM54_RS33300 PF12241 Trans-2-enoyl-CoA reductase catalytic region FFM54_RS33300 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FFM54_RS33310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FFM54_RS33310 PF00529 HlyD membrane-fusion protein of T1SS FFM54_RS33320 PF07690 Major Facilitator Superfamily FFM54_RS33325 PF02321 Outer membrane efflux protein FFM54_RS33335 PF00072 Response regulator receiver domain FFM54_RS33335 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS33390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS33390 PF03466 LysR substrate binding domain FFM54_RS33400 PF07690 Major Facilitator Superfamily FFM54_RS33405 PF04909 Amidohydrolase FFM54_RS33440 PF01566 Natural resistance-associated macrophage protein FFM54_RS33480 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS33510 PF13296 Putative type VI secretion system Rhs element Vgr FFM54_RS33510 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS33510 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FFM54_RS33535 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS33620 PF00691 OmpA family FFM54_RS33620 PF01389 OmpA-like transmembrane domain FFM54_RS33625 PF05662 Coiled stalk of trimeric autotransporter adhesin FFM54_RS33625 PF03895 YadA-like membrane anchor domain FFM54_RS33625 PF05658 Head domain of trimeric autotransporter adhesin FFM54_RS33635 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS33635 PF00072 Response regulator receiver domain FFM54_RS33650 PF05666 Fels-1 Prophage Protein-like FFM54_RS33660 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS33660 PF00072 Response regulator receiver domain FFM54_RS33665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS33665 PF03466 LysR substrate binding domain FFM54_RS33700 PF10503 Esterase PHB depolymerase FFM54_RS33715 PF11896 Domain of unknown function (DUF3416) FFM54_RS33715 PF00128 Alpha amylase, catalytic domain FFM54_RS33720 PF16657 Maltogenic Amylase, C-terminal domain FFM54_RS33720 PF00128 Alpha amylase, catalytic domain FFM54_RS33725 PF02806 Alpha amylase, C-terminal all-beta domain FFM54_RS33725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FFM54_RS33730 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FFM54_RS33730 PF00128 Alpha amylase, catalytic domain FFM54_RS33735 PF11941 Domain of unknown function (DUF3459) FFM54_RS33735 PF00128 Alpha amylase, catalytic domain FFM54_RS33745 PF00128 Alpha amylase, catalytic domain FFM54_RS33765 PF00155 Aminotransferase class I and II FFM54_RS33765 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS33770 PF04072 Leucine carboxyl methyltransferase FFM54_RS33810 PF00589 Phage integrase family FFM54_RS33820 PF02673 Bacitracin resistance protein BacA FFM54_RS33835 PF01476 LysM domain FFM54_RS33835 PF01551 Peptidase family M23 FFM54_RS33840 PF13193 AMP-binding enzyme C-terminal domain FFM54_RS33840 PF00501 AMP-binding enzyme FFM54_RS33855 PF01554 MatE FFM54_RS33930 PF02541 Ppx/GppA phosphatase family FFM54_RS33935 PF13090 Polyphosphate kinase C-terminal domain 2 FFM54_RS33935 PF02503 Polyphosphate kinase middle domain FFM54_RS33935 PF13089 Polyphosphate kinase N-terminal domain FFM54_RS33935 PF17941 Polyphosphate kinase C-terminal domain 1 FFM54_RS33945 PF11808 Phosphate regulon sensor protein PhoR FFM54_RS33945 PF00989 PAS fold FFM54_RS33945 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS33945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS33950 PF00072 Response regulator receiver domain FFM54_RS33950 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS33955 PF01895 PhoU domain FFM54_RS33960 PF00005 ABC transporter FFM54_RS33965 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS33970 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS33975 PF12849 PBP superfamily domain FFM54_RS33985 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FFM54_RS33985 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FFM54_RS33985 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FFM54_RS33985 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FFM54_RS33990 PF00809 Pterin binding enzyme FFM54_RS33995 PF01434 Peptidase family M41 FFM54_RS33995 PF06480 FtsH Extracellular FFM54_RS33995 PF17862 AAA+ lid domain FFM54_RS33995 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS34000 PF01728 FtsJ-like methyltransferase FFM54_RS34015 PF03449 Transcription elongation factor, N-terminal FFM54_RS34015 PF01272 Transcription elongation factor, GreA/GreB, C-term FFM54_RS34020 PF02142 MGS-like domain FFM54_RS34020 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FFM54_RS34020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFM54_RS34025 PF01810 LysE type translocator FFM54_RS34030 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FFM54_RS34030 PF00117 Glutamine amidotransferase class-I FFM54_RS34040 PF12833 Helix-turn-helix domain FFM54_RS34040 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FFM54_RS34060 PF01464 Transglycosylase SLT domain FFM54_RS34060 PF01476 LysM domain FFM54_RS34065 PF00753 Metallo-beta-lactamase superfamily FFM54_RS34065 PF16123 Hydroxyacylglutathione hydrolase C-terminus FFM54_RS34070 PF08241 Methyltransferase domain FFM54_RS34075 PF00075 RNase H FFM54_RS34080 PF00929 Exonuclease FFM54_RS34090 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FFM54_RS34100 PF08946 Osmosensory transporter coiled coil FFM54_RS34100 PF00083 Sugar (and other) transporter FFM54_RS34150 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FFM54_RS34160 PF01039 Carboxyl transferase domain FFM54_RS34165 PF06857 Malonate decarboxylase delta subunit (MdcD) FFM54_RS34170 PF16957 Malonate decarboxylase, alpha subunit, transporter FFM54_RS34190 PF03466 LysR substrate binding domain FFM54_RS34190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS34200 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FFM54_RS34200 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FFM54_RS34205 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain FFM54_RS34205 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain FFM54_RS34235 PF00011 Hsp20/alpha crystallin family FFM54_RS34250 PF00155 Aminotransferase class I and II FFM54_RS34250 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS34285 PF03466 LysR substrate binding domain FFM54_RS34285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS34295 PF03055 Retinal pigment epithelial membrane protein FFM54_RS34305 PF01380 SIS domain FFM54_RS34315 PF01037 Lrp/AsnC ligand binding domain FFM54_RS34320 PF00155 Aminotransferase class I and II FFM54_RS34320 PF00392 Bacterial regulatory proteins, gntR family FFM54_RS34345 PF00072 Response regulator receiver domain FFM54_RS34345 PF00990 Diguanylate cyclase, GGDEF domain FFM54_RS34380 PF00356 Bacterial regulatory proteins, lacI family FFM54_RS34390 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS34405 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS34415 PF00005 ABC transporter FFM54_RS34415 PF08402 TOBE domain FFM54_RS34425 PF00149 Calcineurin-like phosphoesterase FFM54_RS34450 PF07690 Major Facilitator Superfamily FFM54_RS34460 PF00892 EamA-like transporter family FFM54_RS34475 PF00174 Oxidoreductase molybdopterin binding domain FFM54_RS34480 PF01292 Prokaryotic cytochrome b561 FFM54_RS34500 PF13667 ThiC-associated domain FFM54_RS34500 PF01964 Radical SAM ThiC family FFM54_RS34535 PF00563 EAL domain FFM54_RS34535 PF12792 CSS motif domain associated with EAL FFM54_RS34540 PF00472 RF-1 domain FFM54_RS34575 PF00324 Amino acid permease FFM54_RS34590 PF13416 Bacterial extracellular solute-binding protein FFM54_RS34600 PF08402 TOBE domain FFM54_RS34600 PF00005 ABC transporter FFM54_RS34605 PF13404 AsnC-type helix-turn-helix domain FFM54_RS34605 PF01037 Lrp/AsnC ligand binding domain FFM54_RS34620 PF01370 NAD dependent epimerase/dehydratase family FFM54_RS34620 PF00391 PEP-utilising enzyme, mobile domain FFM54_RS34625 PF02082 Transcriptional regulator FFM54_RS34655 PF13533 Biotin-lipoyl like FFM54_RS34660 PF00873 AcrB/AcrD/AcrF family FFM54_RS34665 PF00873 AcrB/AcrD/AcrF family FFM54_RS34685 PF00578 AhpC/TSA family FFM54_RS34690 PF00563 EAL domain FFM54_RS34690 PF00990 Diguanylate cyclase, GGDEF domain FFM54_RS34690 PF03707 Bacterial signalling protein N terminal repeat FFM54_RS34700 PF00034 Cytochrome c FFM54_RS34705 PF00115 Cytochrome C and Quinol oxidase polypeptide I FFM54_RS34720 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FFM54_RS34720 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FFM54_RS34720 PF00034 Cytochrome c FFM54_RS34725 PF00034 Cytochrome c FFM54_RS34745 PF07730 Histidine kinase FFM54_RS34745 PF17200 Single Cache domain 2 FFM54_RS34760 PF09084 NMT1/THI5 like FFM54_RS34780 PF01842 ACT domain FFM54_RS34780 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FFM54_RS34780 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FFM54_RS34785 PF02311 AraC-like ligand binding domain FFM54_RS34785 PF12833 Helix-turn-helix domain FFM54_RS34795 PF01321 Creatinase/Prolidase N-terminal domain FFM54_RS34795 PF00557 Metallopeptidase family M24 FFM54_RS34855 PF00196 Bacterial regulatory proteins, luxR family FFM54_RS34855 PF00072 Response regulator receiver domain FFM54_RS34870 PF00246 Zinc carboxypeptidase FFM54_RS34870 PF18027 Cytosolic carboxypeptidase N-terminal domain FFM54_RS34875 PF03883 Peroxide stress protein YaaA FFM54_RS34885 PF00155 Aminotransferase class I and II FFM54_RS34895 PF00378 Enoyl-CoA hydratase/isomerase FFM54_RS34900 PF00300 Histidine phosphatase superfamily (branch 1) FFM54_RS34910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS34910 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS34910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS34925 PF01575 MaoC like domain FFM54_RS34930 PF01575 MaoC like domain FFM54_RS34930 PF00171 Aldehyde dehydrogenase family FFM54_RS34935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS34935 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS34935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS34940 PF02770 Acyl-CoA dehydrogenase, middle domain FFM54_RS34940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FFM54_RS34940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FFM54_RS34950 PF00293 NUDIX domain FFM54_RS34960 PF00361 Proton-conducting membrane transporter FFM54_RS34965 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FFM54_RS34965 PF00361 Proton-conducting membrane transporter FFM54_RS34970 PF00361 Proton-conducting membrane transporter FFM54_RS34970 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FFM54_RS34975 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FFM54_RS34980 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FFM54_RS34985 PF12838 4Fe-4S dicluster domain FFM54_RS34990 PF00146 NADH dehydrogenase FFM54_RS34995 PF00384 Molybdopterin oxidoreductase FFM54_RS34995 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FFM54_RS34995 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FFM54_RS35000 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FFM54_RS35000 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FFM54_RS35000 PF10531 SLBB domain FFM54_RS35010 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FFM54_RS35015 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FFM54_RS35020 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FFM54_RS35025 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FFM54_RS35035 PF03840 Preprotein translocase SecG subunit FFM54_RS35040 PF00121 Triosephosphate isomerase FFM54_RS35045 PF14765 Polyketide synthase dehydratase FFM54_RS35045 PF00550 Phosphopantetheine attachment site FFM54_RS35045 PF00698 Acyl transferase domain FFM54_RS35045 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS35045 PF08659 KR domain FFM54_RS35050 PF03725 3' exoribonuclease family, domain 2 FFM54_RS35050 PF00575 S1 RNA binding domain FFM54_RS35050 PF01138 3' exoribonuclease family, domain 1 FFM54_RS35050 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FFM54_RS35050 PF00013 KH domain FFM54_RS35060 PF00312 Ribosomal protein S15 FFM54_RS35065 PF13458 Periplasmic binding protein FFM54_RS35080 PF00484 Carbonic anhydrase FFM54_RS35085 PF00916 Sulfate permease family FFM54_RS35085 PF01740 STAS domain FFM54_RS35090 PF00682 HMGL-like FFM54_RS35090 PF08502 LeuA allosteric (dimerisation) domain FFM54_RS35095 PF01066 CDP-alcohol phosphatidyltransferase FFM54_RS35100 PF02666 Phosphatidylserine decarboxylase FFM54_RS35105 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FFM54_RS35105 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FFM54_RS35110 PF10369 Small subunit of acetolactate synthase FFM54_RS35115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FFM54_RS35115 PF00205 Thiamine pyrophosphate enzyme, central domain FFM54_RS35115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FFM54_RS35150 PF13439 Glycosyltransferase Family 4 FFM54_RS35150 PF00534 Glycosyl transferases group 1 FFM54_RS35155 PF01219 Prokaryotic diacylglycerol kinase FFM54_RS35160 PF08360 QacR-like protein, C-terminal region FFM54_RS35160 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS35165 PF03641 Possible lysine decarboxylase FFM54_RS35180 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FFM54_RS35185 PF07690 Major Facilitator Superfamily FFM54_RS35190 PF01425 Amidase FFM54_RS35200 PF02272 DHHA1 domain FFM54_RS35200 PF01411 tRNA synthetases class II (A) FFM54_RS35200 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FFM54_RS35225 PF00893 Small Multidrug Resistance protein FFM54_RS35235 PF00072 Response regulator receiver domain FFM54_RS35235 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS35240 PF02702 Osmosensitive K+ channel His kinase sensor domain FFM54_RS35240 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS35240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS35240 PF13492 GAF domain FFM54_RS35240 PF13493 Domain of unknown function (DUF4118) FFM54_RS35250 PF02669 K+-transporting ATPase, c chain FFM54_RS35260 PF03814 Potassium-transporting ATPase A subunit FFM54_RS35275 PF00107 Zinc-binding dehydrogenase FFM54_RS35275 PF08240 Alcohol dehydrogenase GroES-like domain FFM54_RS35290 PF02142 MGS-like domain FFM54_RS35310 PF01709 Transcriptional regulator FFM54_RS35315 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FFM54_RS35315 PF02844 Phosphoribosylglycinamide synthetase, N domain FFM54_RS35315 PF02843 Phosphoribosylglycinamide synthetase, C domain FFM54_RS35320 PF01218 Coproporphyrinogen III oxidase FFM54_RS35325 PF01467 Cytidylyltransferase-like FFM54_RS35335 PF02590 Predicted SPOUT methyltransferase FFM54_RS35340 PF02545 Maf-like protein FFM54_RS35345 PF00575 S1 RNA binding domain FFM54_RS35345 PF10150 Ribonuclease E/G family FFM54_RS35355 PF00860 Permease family FFM54_RS35410 PF04542 Sigma-70 region 2 FFM54_RS35410 PF12680 SnoaL-like domain FFM54_RS35410 PF08281 Sigma-70, region 4 FFM54_RS35420 PF02627 Carboxymuconolactone decarboxylase family FFM54_RS35435 PF07690 Major Facilitator Superfamily FFM54_RS35455 PF00535 Glycosyl transferase family 2 FFM54_RS35465 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FFM54_RS35485 PF13439 Glycosyltransferase Family 4 FFM54_RS35485 PF00534 Glycosyl transferases group 1 FFM54_RS35490 PF00005 ABC transporter FFM54_RS35490 PF00664 ABC transporter transmembrane region FFM54_RS35505 PF17773 UPF0176 acylphosphatase like domain FFM54_RS35510 PF00749 tRNA synthetases class I (E and Q), catalytic domain FFM54_RS35520 PF00271 Helicase conserved C-terminal domain FFM54_RS35520 PF00270 DEAD/DEAH box helicase FFM54_RS35530 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FFM54_RS35540 PF01370 NAD dependent epimerase/dehydratase family FFM54_RS35540 PF02222 ATP-grasp domain FFM54_RS35560 PF10282 Lactonase, 7-bladed beta-propeller FFM54_RS35570 PF00723 Glycosyl hydrolases family 15 FFM54_RS35580 PF17938 Tetracyclin repressor-like, C-terminal domain FFM54_RS35580 PF00440 Bacterial regulatory proteins, tetR family FFM54_RS35590 PF00730 HhH-GPD superfamily base excision DNA repair protein FFM54_RS35590 PF00633 Helix-hairpin-helix motif FFM54_RS35590 PF10576 Iron-sulfur binding domain of endonuclease III FFM54_RS35595 PF00892 EamA-like transporter family FFM54_RS35610 PF00034 Cytochrome c FFM54_RS35615 PF00034 Cytochrome c FFM54_RS35620 PF00004 ATPase family associated with various cellular activities (AAA) FFM54_RS35620 PF17871 AAA lid domain FFM54_RS35620 PF02861 Clp amino terminal domain, pathogenicity island component FFM54_RS35620 PF07724 AAA domain (Cdc48 subfamily) FFM54_RS35620 PF10431 C-terminal, D2-small domain, of ClpB protein FFM54_RS35630 PF03594 Benzoate membrane transport protein FFM54_RS35640 PF00923 Transaldolase/Fructose-6-phosphate aldolase FFM54_RS35645 PF06983 3-demethylubiquinone-9 3-methyltransferase FFM54_RS35650 PF00474 Sodium:solute symporter family FFM54_RS35660 PF13847 Methyltransferase domain FFM54_RS35670 PF04345 Chorismate lyase FFM54_RS35675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS35675 PF00183 Hsp90 protein FFM54_RS35685 PF00155 Aminotransferase class I and II FFM54_RS35695 PF00892 EamA-like transporter family FFM54_RS35700 PF00155 Aminotransferase class I and II FFM54_RS35710 PF02567 Phenazine biosynthesis-like protein FFM54_RS35715 PF00990 Diguanylate cyclase, GGDEF domain FFM54_RS35715 PF03707 Bacterial signalling protein N terminal repeat FFM54_RS35715 PF00563 EAL domain FFM54_RS35785 PF00521 DNA gyrase/topoisomerase IV, subunit A FFM54_RS35790 PF01751 Toprim domain FFM54_RS35790 PF00204 DNA gyrase B FFM54_RS35790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS35790 PF00986 DNA gyrase B subunit, carboxyl terminus FFM54_RS35795 PF12848 ABC transporter FFM54_RS35795 PF16326 ABC transporter C-terminal domain FFM54_RS35795 PF00005 ABC transporter FFM54_RS35805 PF00301 Rubredoxin FFM54_RS35825 PF01176 Translation initiation factor 1A / IF-1 FFM54_RS35870 PF13296 Putative type VI secretion system Rhs element Vgr FFM54_RS35870 PF04717 Type VI secretion system, phage-baseplate injector FFM54_RS35870 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) FFM54_RS35925 PF04984 Phage tail sheath protein subtilisin-like domain FFM54_RS35925 PF17482 Phage tail sheath C-terminal domain FFM54_RS35990 PF00574 Clp protease FFM54_RS36090 PF00589 Phage integrase family FFM54_RS36100 PF14659 Phage integrase, N-terminal SAM-like domain FFM54_RS36100 PF00589 Phage integrase family FFM54_RS36100 PF13356 Arm DNA-binding domain FFM54_RS36105 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FFM54_RS36105 PF17287 POTRA domain FFM54_RS36105 PF08479 POTRA domain, ShlB-type FFM54_RS36145 PF00768 D-alanyl-D-alanine carboxypeptidase FFM54_RS36150 PF03974 Ecotin FFM54_RS36185 PF01161 Phosphatidylethanolamine-binding protein FFM54_RS36190 PF07690 Major Facilitator Superfamily FFM54_RS36210 PF00982 Glycosyltransferase family 20 FFM54_RS36240 PF13683 Integrase core domain FFM54_RS36240 PF13276 HTH-like domain FFM54_RS36265 PF17287 POTRA domain FFM54_RS36265 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FFM54_RS36265 PF08479 POTRA domain, ShlB-type FFM54_RS36335 PF02142 MGS-like domain FFM54_RS36335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FFM54_RS36335 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FFM54_RS36340 PF07690 Major Facilitator Superfamily FFM54_RS36345 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FFM54_RS36355 PF16861 Carbamoyltransferase C-terminus FFM54_RS36355 PF02543 Carbamoyltransferase N-terminus FFM54_RS36360 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FFM54_RS36360 PF01565 FAD binding domain FFM54_RS36405 PF00005 ABC transporter FFM54_RS36410 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS36430 PF00672 HAMP domain FFM54_RS36430 PF00512 His Kinase A (phospho-acceptor) domain FFM54_RS36430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FFM54_RS36435 PF00072 Response regulator receiver domain FFM54_RS36435 PF00486 Transcriptional regulatory protein, C terminal FFM54_RS36445 PF17954 Quercetinase C-terminal cupin domain FFM54_RS36445 PF02678 Pirin FFM54_RS36455 PF00497 Bacterial extracellular solute-binding proteins, family 3 FFM54_RS36460 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS36465 PF00528 Binding-protein-dependent transport system inner membrane component FFM54_RS36470 PF00005 ABC transporter FFM54_RS36475 PF13609 Gram-negative porin FFM54_RS36480 PF00543 Nitrogen regulatory protein P-II FFM54_RS36510 PF01541 GIY-YIG catalytic domain FFM54_RS36515 PF00719 Inorganic pyrophosphatase FFM54_RS36520 PF00171 Aldehyde dehydrogenase family FFM54_RS36530 PF07690 Major Facilitator Superfamily FFM54_RS36545 PF02602 Uroporphyrinogen-III synthase HemD FFM54_RS36560 PF00311 Phosphoenolpyruvate carboxylase FFM54_RS36570 PF08241 Methyltransferase domain FFM54_RS36610 PF14698 Argininosuccinate lyase C-terminal FFM54_RS36610 PF00206 Lyase FFM54_RS36615 PF13419 Haloacid dehalogenase-like hydrolase FFM54_RS36625 PF01276 Orn/Lys/Arg decarboxylase, major domain FFM54_RS36625 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FFM54_RS36625 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FFM54_RS36630 PF00692 dUTPase FFM54_RS36640 PF10609 NUBPL iron-transfer P-loop NTPase FFM54_RS36650 PF00691 OmpA family FFM54_RS36650 PF05736 OprF membrane domain FFM54_RS36660 PF01588 Putative tRNA binding domain FFM54_RS36660 PF09334 tRNA synthetases class I (M) FFM54_RS36665 PF00891 O-methyltransferase domain FFM54_RS36665 PF16864 Dimerisation domain FFM54_RS36680 PF04357 TamB, inner membrane protein subunit of TAM complex FFM54_RS36685 PF17243 POTRA domain TamA domain 1 FFM54_RS36685 PF01103 Surface antigen FFM54_RS36685 PF07244 Surface antigen variable number repeat FFM54_RS36695 PF02616 Segregation and condensation protein ScpA FFM54_RS36705 PF02569 Pantoate-beta-alanine ligase FFM54_RS36710 PF02261 Aspartate decarboxylase FFM54_RS36715 PF10609 NUBPL iron-transfer P-loop NTPase FFM54_RS36720 PF07681 DoxX FFM54_RS36725 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FFM54_RS36725 PF07685 CobB/CobQ-like glutamine amidotransferase domain FFM54_RS36730 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FFM54_RS36735 PF03186 CobD/Cbib protein FFM54_RS36735 PF17113 Regulatory signalling modulator protein AmpE FFM54_RS36745 PF01497 Periplasmic binding protein FFM54_RS36765 PF02654 Cobalamin-5-phosphate synthase FFM54_RS36770 PF02277 Phosphoribosyltransferase FFM54_RS36775 PF00005 ABC transporter FFM54_RS36780 PF01032 FecCD transport family FFM54_RS36785 PF00593 TonB dependent receptor FFM54_RS36785 PF07715 TonB-dependent Receptor Plug Domain FFM54_RS36795 PF05164 Cell division protein ZapA FFM54_RS36815 PF01790 Prolipoprotein diacylglyceryl transferase FFM54_RS36820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS36820 PF03466 LysR substrate binding domain FFM54_RS36830 PF00920 Dehydratase family FFM54_RS36835 PF00034 Cytochrome c FFM54_RS36845 PF04364 DNA polymerase III chi subunit, HolC FFM54_RS36850 PF02789 Cytosol aminopeptidase family, N-terminal domain FFM54_RS36850 PF00883 Cytosol aminopeptidase family, catalytic domain FFM54_RS36855 PF03739 Lipopolysaccharide export system permease LptF/LptG FFM54_RS36870 PF14824 Sirohaem biosynthesis protein central FFM54_RS36870 PF10414 Sirohaem synthase dimerisation region FFM54_RS36870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FFM54_RS36875 PF00009 Elongation factor Tu GTP binding domain FFM54_RS36880 PF01507 Phosphoadenosine phosphosulfate reductase family FFM54_RS36885 PF01507 Phosphoadenosine phosphosulfate reductase family FFM54_RS36900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS36900 PF03466 LysR substrate binding domain FFM54_RS36920 PF08671 Anti-repressor SinI FFM54_RS36920 PF01381 Helix-turn-helix FFM54_RS36925 PF00596 Class II Aldolase and Adducin N-terminal domain FFM54_RS36930 PF00701 Dihydrodipicolinate synthetase family FFM54_RS36935 PF03475 3-alpha domain FFM54_RS36935 PF03473 MOSC domain FFM54_RS36940 PF00561 alpha/beta hydrolase fold FFM54_RS36945 PF03466 LysR substrate binding domain FFM54_RS36945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS36950 PF03466 LysR substrate binding domain FFM54_RS36950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FFM54_RS36960 PF01479 S4 domain FFM54_RS36960 PF00849 RNA pseudouridylate synthase FFM54_RS36975 PF00111 2Fe-2S iron-sulfur cluster binding domain FFM54_RS36975 PF00175 Oxidoreductase NAD-binding domain FFM54_RS36975 PF00970 Oxidoreductase FAD-binding domain FFM54_RS36980 PF00202 Aminotransferase class-III FFM54_RS36985 PF00583 Acetyltransferase (GNAT) family FFM54_RS37000 PF00005 ABC transporter FFM54_RS37005 PF12399 Branched-chain amino acid ATP-binding cassette transporter FFM54_RS37005 PF00005 ABC transporter FFM54_RS37010 PF11862 Domain of unknown function (DUF3382) FFM54_RS37010 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS37015 PF02653 Branched-chain amino acid transport system / permease component FFM54_RS37025 PF02401 LytB protein FFM54_RS37030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FFM54_RS37035 PF04002 RadC-like JAB domain FFM54_RS37040 PF00830 Ribosomal L28 family