locus-tag	class	description
FFM54_RS00085	COG0477	Major facilitator Superfamily
FFM54_RS00095	COG0784	Response regulator, receiver
FFM54_RS00100	COG4251	negative regulation of phosphorylation
FFM54_RS00115	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FFM54_RS00145	COG1278	Cold shock
FFM54_RS00185	COG0446	pyridine nucleotide-disulphide oxidoreductase
FFM54_RS00185	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FFM54_RS00205	COG1760	l-serine dehydratase
FFM54_RS00245	COG1294	oxidase, subunit
FFM54_RS00250	COG1271	oxidase subunit
FFM54_RS00265	COG1285	pathogenesis
FFM54_RS00295	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FFM54_RS00310	COG4644	lycopene metabolic process
FFM54_RS00345	COG1450	Type ii and iii secretion system protein
FFM54_RS00350	COG2207	Transcriptional regulator
FFM54_RS00395	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FFM54_RS00400	COG4789	Type iii secretion
FFM54_RS00480	COG2186	Transcriptional regulator
FFM54_RS00485	COG2084	Dehydrogenase
FFM54_RS00495	COG0235	Class ii aldolase
FFM54_RS00500	COG2271	Major facilitator Superfamily
FFM54_RS00505	COG3622	Belongs to the hyi family
FFM54_RS00510	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FFM54_RS00565	COG4175	Glycine betaine
FFM54_RS00605	COG0640	Transcriptional regulator
FFM54_RS00620	COG0798	PFAM Bile acid sodium symporter
FFM54_RS00650	COG5295	Hep Hag repeat protein
FFM54_RS00650	COG5295	Hep Hag repeat protein
FFM54_RS00690	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FFM54_RS00695	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS00740	COG4638	Rieske (2fe-2S)
FFM54_RS00780	COG2271	Major facilitator Superfamily
FFM54_RS00830	COG1012	belongs to the aldehyde dehydrogenase family
FFM54_RS00835	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FFM54_RS00850	COG0583	DNA-binding transcription factor activity
FFM54_RS00865	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FFM54_RS00890	COG1349	DNA-binding transcription factor activity
FFM54_RS00910	COG0246	Mannitol dehydrogenase
FFM54_RS00920	COG4948	Mandelate Racemase Muconate Lactonizing
FFM54_RS00965	COG5441	Belongs to the UPF0261 family
FFM54_RS00970	COG5564	TIM-barrel signal transduction protein
FFM54_RS01005	COG3023	N-Acetylmuramoyl-L-alanine amidase
FFM54_RS01015	COG5295	Hep Hag repeat protein
FFM54_RS01155	COG0302	gtp cyclohydrolase
FFM54_RS01245	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FFM54_RS01260	COG2916	Histone family protein nucleoid-structuring protein H-NS
FFM54_RS01295	COG4790	Type iii secretion
FFM54_RS01440	COG0477	Major facilitator Superfamily
FFM54_RS01470	COG1280	lysine exporter protein (LysE YggA)
FFM54_RS01475	COG1522	sequence-specific DNA binding
FFM54_RS01485	COG0306	phosphate transporter
FFM54_RS01510	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS01545	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FFM54_RS01555	COG4521	taurine ABC transporter
FFM54_RS01565	COG2175	clavaminate synthase activity
FFM54_RS01575	COG2194	sulfuric ester hydrolase activity
FFM54_RS01580	COG1215	transferase activity, transferring glycosyl groups
FFM54_RS01615	COG1215	transferase activity, transferring glycosyl groups
FFM54_RS01635	COG3550	peptidyl-serine autophosphorylation
FFM54_RS01820	COG2207	Transcriptional regulator
FFM54_RS01855	COG4794	Type iii secretion
FFM54_RS01860	COG4790	Type iii secretion
FFM54_RS01875	COG4789	Type iii secretion
FFM54_RS01880	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FFM54_RS01995	COG0427	acetyl-CoA hydrolase
FFM54_RS02000	COG2030	dehydratase
FFM54_RS02010	COG0583	DNA-binding transcription factor activity
FFM54_RS02030	COG2814	Major facilitator Superfamily
FFM54_RS02040	COG4191	Histidine kinase
FFM54_RS02080	COG3621	Patatin-like phospholipase
FFM54_RS02125	COG1472	Belongs to the glycosyl hydrolase 3 family
FFM54_RS02135	COG0154	amidase activity
FFM54_RS02155	COG3276	selenocysteine insertion sequence binding
FFM54_RS02170	COG2864	formate dehydrogenase
FFM54_RS02175	COG0437	4 iron, 4 sulfur cluster binding
FFM54_RS02200	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFM54_RS02215	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FFM54_RS02220	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FFM54_RS02230	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFM54_RS02250	COG3608	succinylglutamate desuccinylase aspartoacylase
FFM54_RS02270	COG1295	ribonuclease BN
FFM54_RS02275	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS02300	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FFM54_RS02300	COG2755	lipolytic protein G-D-S-L family
FFM54_RS02315	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FFM54_RS02330	COG0438	transferase activity, transferring glycosyl groups
FFM54_RS02350	COG2755	lipolytic protein G-D-S-L family
FFM54_RS02350	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FFM54_RS02355	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
FFM54_RS02360	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FFM54_RS02395	COG0285	dihydrofolate synthase activity
FFM54_RS02400	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FFM54_RS02405	COG0159	tryptophan synthase activity
FFM54_RS02415	COG0133	tryptophan synthase activity
FFM54_RS02420	COG0135	phosphoribosylanthranilate isomerase activity
FFM54_RS02475	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FFM54_RS02500	COG1522	sequence-specific DNA binding
FFM54_RS02530	COG0372	Belongs to the citrate synthase family
FFM54_RS02535	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FFM54_RS02540	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FFM54_RS02545	COG1053	succinate dehydrogenase
FFM54_RS02555	COG2009	succinate dehydrogenase
FFM54_RS02565	COG2188	Transcriptional regulator
FFM54_RS02590	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FFM54_RS02595	COG3064	Membrane
FFM54_RS02595	COG3210	domain, Protein
FFM54_RS02595	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
FFM54_RS02600	COG2831	hemolysin activation secretion protein
FFM54_RS02660	COG1177	transmembrane transport
FFM54_RS02665	COG1176	ABC-type spermidine putrescine transport system, permease component I
FFM54_RS02675	COG3842	ATPase activity
FFM54_RS02690	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
FFM54_RS02695	COG4774	siderophore transport
FFM54_RS02705	COG3038	cytochrome b561
FFM54_RS02750	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FFM54_RS02755	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FFM54_RS02780	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FFM54_RS02805	COG2081	HI0933 family
FFM54_RS02810	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FFM54_RS02830	COG0142	geranyltranstransferase activity
FFM54_RS02850	COG0412	Dienelactone hydrolase
FFM54_RS02870	COG1252	NADH dehydrogenase
FFM54_RS02880	COG1611	Belongs to the LOG family
FFM54_RS02900	COG1683	Conserved Protein
FFM54_RS02940	COG4695	Portal protein
FFM54_RS02950	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FFM54_RS03005	COG0725	ABC transporter, periplasmic molybdate-binding protein
FFM54_RS03045	COG0583	DNA-binding transcription factor activity
FFM54_RS03060	COG1253	flavin adenine dinucleotide binding
FFM54_RS03065	COG0352	thiamine-phosphate diphosphorylase activity
FFM54_RS03090	COG1304	FMN binding
FFM54_RS03140	COG4569	acetaldehyde dehydrogenase (acetylating) activity
FFM54_RS03155	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FFM54_RS03175	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FFM54_RS03215	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FFM54_RS03220	COG5654	RES domain protein
FFM54_RS03225	COG5642	Protein of unknown function (DUF2384)
FFM54_RS03250	COG0438	transferase activity, transferring glycosyl groups
FFM54_RS03255	COG0438	transferase activity, transferring glycosyl groups
FFM54_RS03275	COG0489	protein tyrosine kinase activity
FFM54_RS03275	COG3206	protein involved in exopolysaccharide biosynthesis
FFM54_RS03295	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FFM54_RS03325	COG0247	lactate metabolic process
FFM54_RS03330	COG1592	Rubrerythrin
FFM54_RS03340	COG3023	N-Acetylmuramoyl-L-alanine amidase
FFM54_RS03355	COG4941	Belongs to the sigma-70 factor family
FFM54_RS03365	COG3795	YCII-related domain
FFM54_RS03370	COG3795	YCII-related domain
FFM54_RS03405	COG0628	permease
FFM54_RS03440	COG2130	NADP-dependent
FFM54_RS03460	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS03485	COG0583	DNA-binding transcription factor activity
FFM54_RS03515	COG2837	iron assimilation
FFM54_RS03530	COG5265	(ABC) transporter
FFM54_RS03540	COG4977	sequence-specific DNA binding
FFM54_RS03575	COG0038	chloride channel
FFM54_RS03615	COG0840	transmembrane signaling receptor activity
FFM54_RS03620	COG0642	Histidine kinase
FFM54_RS03645	COG0025	NhaP-type Na H and K H
FFM54_RS03650	COG2733	membrane
FFM54_RS03665	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FFM54_RS03680	COG2146	nitrite reductase [NAD(P)H] activity
FFM54_RS03685	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FFM54_RS03690	COG4638	Rieske (2fe-2S)
FFM54_RS03720	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FFM54_RS03740	COG0446	pyridine nucleotide-disulphide oxidoreductase
FFM54_RS03740	COG1902	pentaerythritol trinitrate reductase activity
FFM54_RS03760	COG0583	DNA-binding transcription factor activity
FFM54_RS03765	COG4638	Rieske (2fe-2S)
FFM54_RS03770	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FFM54_RS03775	COG0543	2 iron, 2 sulfur cluster binding
FFM54_RS03775	COG0633	Ferredoxin
FFM54_RS03780	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS03800	COG1335	isochorismatase
FFM54_RS03825	COG0833	amino acid
FFM54_RS03855	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FFM54_RS03865	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS03875	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FFM54_RS03910	COG1611	Belongs to the LOG family
FFM54_RS03950	COG0840	transmembrane signaling receptor activity
FFM54_RS03975	COG1136	(ABC) transporter
FFM54_RS03990	COG0589	response to stress
FFM54_RS04010	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFM54_RS04020	COG0842	Transport permease protein
FFM54_RS04025	COG4191	Histidine kinase
FFM54_RS04025	COG0784	Response regulator, receiver
FFM54_RS04035	COG0840	transmembrane signaling receptor activity
FFM54_RS04080	COG0356	it plays a direct role in the translocation of protons across the membrane
FFM54_RS04095	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FFM54_RS04115	COG0280	phosphate acetyltransferase
FFM54_RS04120	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FFM54_RS04145	COG2823	Periplasmic or secreted lipoprotein
FFM54_RS04160	COG0295	cytidine deaminase activity
FFM54_RS04200	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FFM54_RS04215	COG0625	glutathione transferase activity
FFM54_RS04250	COG0596	Alpha beta hydrolase
FFM54_RS04400	COG1573	uracil-dna glycosylase
FFM54_RS04405	COG2936	dipeptidyl-peptidase activity
FFM54_RS04415	COG1404	Belongs to the peptidase S8 family
FFM54_RS04485	COG0672	)-iron permease
FFM54_RS04500	COG0504	CTP synthase activity
FFM54_RS04645	COG0583	DNA-binding transcription factor activity
FFM54_RS04650	COG1253	flavin adenine dinucleotide binding
FFM54_RS04705	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FFM54_RS04725	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS04735	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS04740	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FFM54_RS04745	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS04760	COG3246	L-lysine catabolic process to acetate
FFM54_RS04770	COG1022	Amp-dependent synthetase and ligase
FFM54_RS04835	COG0494	nUDIX hydrolase
FFM54_RS04845	COG0546	phosphoglycolate phosphatase activity
FFM54_RS04920	COG3209	COG3209 Rhs family protein
FFM54_RS04955	COG3436	PFAM IS66 Orf2 family protein
FFM54_RS04980	COG0395	ABC-type sugar transport system, permease component
FFM54_RS04985	COG1175	transmembrane transport
FFM54_RS04990	COG1653	transport
FFM54_RS04995	COG3842	ATPase activity
FFM54_RS05010	COG1609	Transcriptional regulator
FFM54_RS05080	COG2801	Transposase and inactivated derivatives
FFM54_RS05220	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS05235	COG3048	D-serine ammonia-lyase activity
FFM54_RS05240	COG0583	DNA-binding transcription factor activity
FFM54_RS05265	COG0477	Major facilitator Superfamily
FFM54_RS05270	COG1104	cysteine desulfurase activity
FFM54_RS05290	COG0477	Major facilitator Superfamily
FFM54_RS05300	COG0583	DNA-binding transcription factor activity
FFM54_RS05310	COG0179	Fumarylacetoacetate (FAA) hydrolase
FFM54_RS05355	COG2916	Histone family protein nucleoid-structuring protein H-NS
FFM54_RS05375	COG2610	gluconate transmembrane transporter activity
FFM54_RS05425	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FFM54_RS05430	COG0601	transmembrane transport
FFM54_RS05455	COG3104	oligopeptide transport
FFM54_RS05495	COG2301	Belongs to the HpcH HpaI aldolase family
FFM54_RS05510	COG1335	isochorismatase
FFM54_RS05535	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FFM54_RS05580	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FFM54_RS05610	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FFM54_RS05630	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FFM54_RS05650	COG2879	small protein
FFM54_RS05655	COG1966	Carbon starvation protein
FFM54_RS05705	COG0463	Glycosyl transferase, family 2
FFM54_RS05800	COG1522	sequence-specific DNA binding
FFM54_RS05820	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS05825	COG1113	amino acid transport
FFM54_RS05845	COG2271	Major facilitator Superfamily
FFM54_RS05920	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FFM54_RS05930	COG3546	catalase activity
FFM54_RS05935	COG3685	Protein conserved in bacteria
FFM54_RS06025	COG0516	GMP reductase activity
FFM54_RS06025	COG0517	IMP dehydrogenase activity
FFM54_RS06045	COG1573	uracil-dna glycosylase
FFM54_RS06050	COG1914	H( )-stimulated, divalent metal cation uptake system
FFM54_RS06070	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS06095	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS06115	COG0784	Response regulator, receiver
FFM54_RS06115	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFM54_RS06115	COG2205	protein histidine kinase activity
FFM54_RS06115	COG2198	Histidine kinase
FFM54_RS06130	COG2204	response regulator
FFM54_RS06165	COG2192	nodulation
FFM54_RS06175	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FFM54_RS06180	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS06190	COG5265	(ABC) transporter
FFM54_RS06205	COG0688	phosphatidylethanolamine metabolic process
FFM54_RS06210	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FFM54_RS06225	COG2084	Dehydrogenase
FFM54_RS06230	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FFM54_RS06240	COG2091	lysine biosynthetic process via aminoadipic acid
FFM54_RS06260	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FFM54_RS06290	COG0022	dehydrogenase e1 component
FFM54_RS06350	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FFM54_RS06415	COG2239	Acts as a magnesium transporter
FFM54_RS06430	COG0071	Belongs to the small heat shock protein (HSP20) family
FFM54_RS06445	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS06470	COG2175	clavaminate synthase activity
FFM54_RS06475	COG3246	L-lysine catabolic process to acetate
FFM54_RS06500	COG0243	molybdopterin cofactor binding
FFM54_RS06505	COG0437	4 iron, 4 sulfur cluster binding
FFM54_RS06510	COG3302	dmso reductase anchor subunit
FFM54_RS06575	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS06585	COG0154	amidase activity
FFM54_RS06610	COG0454	-acetyltransferase
FFM54_RS06610	COG0456	acetyltransferase
FFM54_RS06675	COG5001	Diguanylate cyclase
FFM54_RS06675	COG3447	MASE1 domain protein
FFM54_RS06675	COG5002	protein histidine kinase activity
FFM54_RS06720	COG1136	(ABC) transporter
FFM54_RS06735	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS06760	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FFM54_RS06770	COG1126	abc transporter atp-binding protein
FFM54_RS06775	COG0765	amino acid transport
FFM54_RS06780	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFM54_RS06795	COG1657	PFAM Prenyltransferase squalene oxidase
FFM54_RS06805	COG1562	ergosterol biosynthetic process
FFM54_RS06855	COG1595	DNA-templated transcription, initiation
FFM54_RS06865	COG1393	Belongs to the ArsC family
FFM54_RS06875	COG1192	Involved in chromosome partitioning
FFM54_RS06920	COG1396	sequence-specific DNA binding
FFM54_RS06945	COG1309	transcriptional regulator
FFM54_RS06970	COG0473	3-isopropylmalate dehydrogenase activity
FFM54_RS06975	COG0583	DNA-binding transcription factor activity
FFM54_RS06990	COG0625	glutathione transferase activity
FFM54_RS07025	COG0671	phosphoesterase, PA-phosphatase related
FFM54_RS07085	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FFM54_RS07100	COG0583	DNA-binding transcription factor activity
FFM54_RS07105	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FFM54_RS07110	COG0589	response to stress
FFM54_RS07160	COG1045	serine acetyltransferase
FFM54_RS07170	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS07175	COG0302	gtp cyclohydrolase
FFM54_RS07195	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FFM54_RS07200	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FFM54_RS07205	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FFM54_RS07210	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FFM54_RS07280	COG1595	DNA-templated transcription, initiation
FFM54_RS07285	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FFM54_RS07320	COG2916	Histone family protein nucleoid-structuring protein H-NS
FFM54_RS07335	COG0477	Major facilitator Superfamily
FFM54_RS07430	COG1176	ABC-type spermidine putrescine transport system, permease component I
FFM54_RS07435	COG1177	transmembrane transport
FFM54_RS07475	COG0432	Pfam Uncharacterised protein family UPF0047
FFM54_RS07515	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FFM54_RS07570	COG3121	Chaperone
FFM54_RS07575	COG3188	usher protein
FFM54_RS07590	COG2885	chlorophyll binding
FFM54_RS07735	COG3188	usher protein
FFM54_RS07775	COG2271	Major facilitator Superfamily
FFM54_RS07780	COG1929	Belongs to the glycerate kinase type-1 family
FFM54_RS07785	COG0469	pyruvate kinase activity
FFM54_RS07790	COG3835	regulator
FFM54_RS07805	COG0300	oxidoreductase activity
FFM54_RS07805	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS07805	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FFM54_RS07805	COG3321	synthase
FFM54_RS07805	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS07840	COG3706	GGDEF domain
FFM54_RS07840	COG4251	negative regulation of phosphorylation
FFM54_RS07840	COG2203	Gaf domain
FFM54_RS07840	COG5001	Diguanylate cyclase
FFM54_RS07890	COG1879	ABC-type sugar transport system periplasmic component
FFM54_RS07895	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFM54_RS07930	COG0513	Belongs to the DEAD box helicase family
FFM54_RS07945	COG1473	amidohydrolase
FFM54_RS07950	COG0583	DNA-binding transcription factor activity
FFM54_RS08005	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS08035	COG3537	Alpha-1,2-mannosidase
FFM54_RS08065	COG0367	asparagine synthase
FFM54_RS08110	COG2885	chlorophyll binding
FFM54_RS08225	COG0583	DNA-binding transcription factor activity
FFM54_RS08280	COG1984	allophanate hydrolase subunit 2
FFM54_RS08295	COG0511	ligase activity, forming carbon-carbon bonds
FFM54_RS08300	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FFM54_RS08360	COG0840	transmembrane signaling receptor activity
FFM54_RS08425	COG0535	radical SAM domain protein
FFM54_RS08435	COG0840	transmembrane signaling receptor activity
FFM54_RS08460	COG1285	pathogenesis
FFM54_RS08550	COG0346	lactoylglutathione lyase activity
FFM54_RS08560	COG1562	ergosterol biosynthetic process
FFM54_RS08585	COG1294	oxidase, subunit
FFM54_RS08590	COG1271	oxidase subunit
FFM54_RS08600	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FFM54_RS08620	COG2860	membrane
FFM54_RS08635	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FFM54_RS08645	COG3720	iron ion transport
FFM54_RS08675	COG3842	ATPase activity
FFM54_RS08680	COG1840	ABC-type Fe3 transport system, periplasmic component
FFM54_RS08695	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS08705	COG0698	ribose 5-phosphate isomerase
FFM54_RS08710	COG1129	ABC transporter
FFM54_RS08715	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFM54_RS08720	COG1879	ABC-type sugar transport system periplasmic component
FFM54_RS08725	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS08730	COG1063	alcohol dehydrogenase
FFM54_RS08735	COG2376	Dihydroxyacetone kinase
FFM54_RS08795	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FFM54_RS08795	COG2755	lipolytic protein G-D-S-L family
FFM54_RS08810	COG0583	DNA-binding transcription factor activity
FFM54_RS08815	COG1473	amidohydrolase
FFM54_RS08835	COG1309	transcriptional regulator
FFM54_RS08840	COG1414	Transcriptional regulator
FFM54_RS08865	COG0840	transmembrane signaling receptor activity
FFM54_RS08905	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FFM54_RS08915	COG1288	antiporter activity
FFM54_RS08920	COG1414	Transcriptional regulator
FFM54_RS08955	COG0709	Synthesizes selenophosphate from selenide and ATP
FFM54_RS08995	COG0583	DNA-binding transcription factor activity
FFM54_RS09000	COG0657	acetylesterase activity
FFM54_RS09005	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFM54_RS09020	COG1301	dicarboxylic acid transport
FFM54_RS09065	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS09070	COG0019	diaminopimelate decarboxylase activity
FFM54_RS09080	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FFM54_RS09140	COG2197	response regulator
FFM54_RS09165	COG2011	ABC-type metal ion transport system permease component
FFM54_RS09195	COG2186	Transcriptional regulator
FFM54_RS09200	COG0247	lactate metabolic process
FFM54_RS09205	COG1139	Iron-sulfur cluster binding protein
FFM54_RS09210	COG1556	Lactate utilization protein
FFM54_RS09225	COG2259	Doxx family
FFM54_RS09250	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FFM54_RS09260	COG0531	amino acid
FFM54_RS09265	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FFM54_RS09305	COG3547	Transposase (IS116 IS110 IS902 family)
FFM54_RS09320	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FFM54_RS09325	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FFM54_RS09330	COG2271	Major facilitator Superfamily
FFM54_RS09355	COG1176	ABC-type spermidine putrescine transport system, permease component I
FFM54_RS09370	COG1012	belongs to the aldehyde dehydrogenase family
FFM54_RS09425	COG0789	Transcriptional regulator
FFM54_RS09440	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FFM54_RS09445	COG0667	Aldo Keto reductase
FFM54_RS09450	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS09465	COG0556	nucleotide-excision repair
FFM54_RS09475	COG4633	Protein conserved in bacteria
FFM54_RS09480	COG0672	)-iron permease
FFM54_RS09490	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FFM54_RS09540	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FFM54_RS09575	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FFM54_RS09645	COG2801	Transposase and inactivated derivatives
FFM54_RS09735	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FFM54_RS09785	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FFM54_RS09835	COG0583	DNA-binding transcription factor activity
FFM54_RS09840	COG1741	Belongs to the pirin family
FFM54_RS09880	COG2814	Major facilitator Superfamily
FFM54_RS09890	COG0583	DNA-binding transcription factor activity
FFM54_RS09895	COG1335	isochorismatase
FFM54_RS09905	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FFM54_RS09930	COG0583	DNA-binding transcription factor activity
FFM54_RS09950	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FFM54_RS09960	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FFM54_RS09995	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FFM54_RS09995	COG1796	DNA polymerase
FFM54_RS10040	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FFM54_RS10045	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FFM54_RS10055	COG1177	transmembrane transport
FFM54_RS10060	COG1176	ABC-type spermidine putrescine transport system, permease component I
FFM54_RS10065	COG3842	ATPase activity
FFM54_RS10080	COG0174	glutamine synthetase
FFM54_RS10085	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FFM54_RS10100	COG1396	sequence-specific DNA binding
FFM54_RS10100	COG1917	Cupin 2, conserved barrel domain protein
FFM54_RS10105	COG1012	belongs to the aldehyde dehydrogenase family
FFM54_RS10110	COG0010	Belongs to the arginase family
FFM54_RS10120	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FFM54_RS10155	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FFM54_RS10175	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS10210	COG3634	alkyl hydroperoxide reductase activity
FFM54_RS10235	COG0778	Nitroreductase
FFM54_RS10245	COG2308	Evidence 4 Homologs of previously reported genes of
FFM54_RS10275	COG1305	Transglutaminase-like
FFM54_RS10280	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FFM54_RS10285	COG2814	Major facilitator Superfamily
FFM54_RS10300	COG4977	sequence-specific DNA binding
FFM54_RS10310	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FFM54_RS10315	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
FFM54_RS10315	COG0028	Belongs to the TPP enzyme family
FFM54_RS10505	COG1566	PFAM secretion protein HlyD family protein
FFM54_RS10515	COG1621	beta-fructofuranosidase activity
FFM54_RS10545	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FFM54_RS10560	COG1902	pentaerythritol trinitrate reductase activity
FFM54_RS10560	COG0446	pyridine nucleotide-disulphide oxidoreductase
FFM54_RS10565	COG0247	lactate metabolic process
FFM54_RS10565	COG2181	nitrate reductase activity
FFM54_RS10570	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FFM54_RS10590	COG2113	Glycine betaine
FFM54_RS10605	COG0583	DNA-binding transcription factor activity
FFM54_RS10610	COG3119	arylsulfatase activity
FFM54_RS10650	COG3246	L-lysine catabolic process to acetate
FFM54_RS10655	COG1250	3-hydroxyacyl-CoA dehydrogenase
FFM54_RS10665	COG0657	acetylesterase activity
FFM54_RS10760	COG1021	2,3-dihydroxybenzoate-AMP ligase
FFM54_RS10790	COG1132	(ABC) transporter
FFM54_RS10830	COG3284	Transcriptional regulator
FFM54_RS10865	COG2252	PERMEase
FFM54_RS10910	COG1012	belongs to the aldehyde dehydrogenase family
FFM54_RS10920	COG4032	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
FFM54_RS10920	COG0028	Belongs to the TPP enzyme family
FFM54_RS10955	COG0330	HflC and HflK could
FFM54_RS10970	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS10975	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FFM54_RS10990	COG1024	Enoyl-CoA hydratase
FFM54_RS10995	COG1024	Enoyl-CoA hydratase
FFM54_RS11005	COG1538	Outer membrane efflux protein
FFM54_RS11015	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFM54_RS11045	COG2066	Belongs to the glutaminase family
FFM54_RS11055	COG0745	RESPONSE REGULATOR receiver
FFM54_RS11060	COG2205	protein histidine kinase activity
FFM54_RS11175	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FFM54_RS11315	COG3291	Pkd domain containing protein
FFM54_RS11335	COG3214	Protein conserved in bacteria
FFM54_RS11345	COG0477	Major facilitator Superfamily
FFM54_RS11355	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
FFM54_RS11375	COG1845	cytochrome c oxidase, subunit III
FFM54_RS11435	COG2207	Transcriptional regulator
FFM54_RS11490	COG2205	protein histidine kinase activity
FFM54_RS11495	COG0745	RESPONSE REGULATOR receiver
FFM54_RS11510	COG1846	Transcriptional regulator
FFM54_RS11525	COG1012	belongs to the aldehyde dehydrogenase family
FFM54_RS11530	COG3384	dioxygenase
FFM54_RS11540	COG3971	2-oxopent-4-enoate hydratase activity
FFM54_RS11550	COG2207	Transcriptional regulator
FFM54_RS11565	COG3842	ATPase activity
FFM54_RS11570	COG4208	sulfate ABC transporter
FFM54_RS11585	COG0642	Histidine kinase
FFM54_RS11595	COG3217	Mosc domain protein beta barrel domain protein
FFM54_RS11595	COG0633	Ferredoxin
FFM54_RS11615	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS11630	COG1024	Enoyl-CoA hydratase
FFM54_RS11660	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FFM54_RS11665	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
FFM54_RS11700	COG1309	transcriptional regulator
FFM54_RS11720	COG1902	pentaerythritol trinitrate reductase activity
FFM54_RS11735	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FFM54_RS11750	COG0628	permease
FFM54_RS11760	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS11805	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS11830	COG1215	transferase activity, transferring glycosyl groups
FFM54_RS11980	COG0183	Belongs to the thiolase family
FFM54_RS11990	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FFM54_RS12015	COG0683	leucine binding
FFM54_RS12025	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FFM54_RS12030	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS12060	COG0583	DNA-binding transcription factor activity
FFM54_RS12085	COG0583	DNA-binding transcription factor activity
FFM54_RS12100	COG2271	Major facilitator Superfamily
FFM54_RS12105	COG1414	Transcriptional regulator
FFM54_RS12110	COG3842	ATPase activity
FFM54_RS12120	COG1175	transmembrane transport
FFM54_RS12125	COG0395	ABC-type sugar transport system, permease component
FFM54_RS12160	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS12195	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS12240	COG0583	DNA-binding transcription factor activity
FFM54_RS12265	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS12280	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FFM54_RS12285	COG2508	Transcriptional regulator
FFM54_RS12290	COG0402	S-adenosylhomocysteine deaminase activity
FFM54_RS12320	COG0038	chloride channel
FFM54_RS12330	COG1858	cytochrome C peroxidase
FFM54_RS12335	COG3511	phospholipase C
FFM54_RS12345	COG2197	response regulator
FFM54_RS12430	COG3320	Male sterility
FFM54_RS12430	COG1022	Amp-dependent synthetase and ligase
FFM54_RS12450	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS12480	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFM54_RS12490	COG2721	sulfolactate sulfo-lyase activity
FFM54_RS12505	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS12515	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS12545	COG5295	Hep Hag repeat protein
FFM54_RS12545	COG5295	Hep Hag repeat protein
FFM54_RS12555	COG2916	Histone family protein nucleoid-structuring protein H-NS
FFM54_RS12610	COG1272	protein, Hemolysin III
FFM54_RS12630	COG1522	sequence-specific DNA binding
FFM54_RS12645	COG1448	Aminotransferase
FFM54_RS12700	COG4191	Histidine kinase
FFM54_RS12700	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFM54_RS12705	COG2201	protein-glutamate methylesterase activity
FFM54_RS12720	COG2373	Large extracellular alpha-helical protein
FFM54_RS12755	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FFM54_RS12770	COG2175	clavaminate synthase activity
FFM54_RS12775	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FFM54_RS12795	COG3291	Pkd domain containing protein
FFM54_RS12810	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FFM54_RS12875	COG0589	response to stress
FFM54_RS12915	COG4221	oxidoreductase activity
FFM54_RS12935	COG1113	amino acid transport
FFM54_RS12950	COG2916	Histone family protein nucleoid-structuring protein H-NS
FFM54_RS13005	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFM54_RS13050	COG0583	DNA-binding transcription factor activity
FFM54_RS13060	COG0583	DNA-binding transcription factor activity
FFM54_RS13090	COG1012	belongs to the aldehyde dehydrogenase family
FFM54_RS13095	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FFM54_RS13100	COG0531	amino acid
FFM54_RS13115	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS13135	COG1902	pentaerythritol trinitrate reductase activity
FFM54_RS13150	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS13160	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FFM54_RS13175	COG0517	IMP dehydrogenase activity
FFM54_RS13175	COG0516	GMP reductase activity
FFM54_RS13180	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FFM54_RS13205	COG2197	response regulator
FFM54_RS13210	COG1285	pathogenesis
FFM54_RS13220	COG1408	metallophosphoesterase
FFM54_RS13235	COG1414	Transcriptional regulator
FFM54_RS13240	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS13250	COG2146	nitrite reductase [NAD(P)H] activity
FFM54_RS13280	COG1414	Transcriptional regulator
FFM54_RS13285	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS13290	COG0028	Belongs to the TPP enzyme family
FFM54_RS13300	COG1012	belongs to the aldehyde dehydrogenase family
FFM54_RS13315	COG0477	Major facilitator Superfamily
FFM54_RS13345	COG0154	amidase activity
FFM54_RS13355	COG1522	sequence-specific DNA binding
FFM54_RS13435	COG0596	Alpha beta hydrolase
FFM54_RS13465	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FFM54_RS13495	COG0840	transmembrane signaling receptor activity
FFM54_RS13560	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS13595	COG0583	DNA-binding transcription factor activity
FFM54_RS13620	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FFM54_RS13625	COG0601	transmembrane transport
FFM54_RS13635	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
FFM54_RS13670	COG3209	COG3209 Rhs family protein
FFM54_RS13715	COG2140	Oxalate decarboxylase
FFM54_RS13720	COG1914	H( )-stimulated, divalent metal cation uptake system
FFM54_RS13735	COG4682	membrane
FFM54_RS13740	COG3781	membrane
FFM54_RS13745	COG0243	molybdopterin cofactor binding
FFM54_RS13750	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FFM54_RS13770	COG1404	Belongs to the peptidase S8 family
FFM54_RS13800	COG2259	Doxx family
FFM54_RS13825	COG4160	amino acid transport
FFM54_RS13830	COG4598	ABC transporter
FFM54_RS13835	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FFM54_RS13895	COG3275	phosphorelay sensor kinase activity
FFM54_RS13920	COG0500	methyltransferase
FFM54_RS13925	COG2207	Transcriptional regulator
FFM54_RS13945	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FFM54_RS13950	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FFM54_RS13955	COG1024	Enoyl-CoA hydratase
FFM54_RS13960	COG1024	Enoyl-CoA hydratase
FFM54_RS13965	COG3425	synthase
FFM54_RS13995	COG0569	domain protein
FFM54_RS13995	COG0475	glutathione-regulated potassium exporter activity
FFM54_RS14005	COG4221	oxidoreductase activity
FFM54_RS14005	COG3321	synthase
FFM54_RS14005	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS14005	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FFM54_RS14025	COG3321	synthase
FFM54_RS14025	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FFM54_RS14025	COG4221	oxidoreductase activity
FFM54_RS14025	COG0300	oxidoreductase activity
FFM54_RS14065	COG0583	DNA-binding transcription factor activity
FFM54_RS14075	COG0387	Pfam Sodium calcium exchanger
FFM54_RS14100	COG0179	Fumarylacetoacetate (FAA) hydrolase
FFM54_RS14130	COG2353	YceI-like domain
FFM54_RS14150	COG1595	DNA-templated transcription, initiation
FFM54_RS14160	COG4774	siderophore transport
FFM54_RS14165	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFM54_RS14170	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFM54_RS14210	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS14220	COG2271	Major facilitator Superfamily
FFM54_RS14370	COG1192	Involved in chromosome partitioning
FFM54_RS14395	COG3657	addiction module killer protein
FFM54_RS14400	COG3636	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FFM54_RS14405	COG4695	Portal protein
FFM54_RS14565	COG0686	Belongs to the AlaDH PNT family
FFM54_RS14605	COG0443	Heat shock 70 kDa protein
FFM54_RS14610	COG0443	Heat shock 70 kDa protein
FFM54_RS14660	COG2264	protein methyltransferase activity
FFM54_RS14700	COG0494	nUDIX hydrolase
FFM54_RS14705	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FFM54_RS14765	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFM54_RS14770	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFM54_RS14785	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FFM54_RS14800	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FFM54_RS14850	COG1902	pentaerythritol trinitrate reductase activity
FFM54_RS14850	COG0446	pyridine nucleotide-disulphide oxidoreductase
FFM54_RS14855	COG1695	Transcriptional regulator
FFM54_RS14910	COG3260	NADH ubiquinone oxidoreductase 20
FFM54_RS14915	COG0649	NAD binding
FFM54_RS14920	COG0651	ATP synthesis coupled electron transport
FFM54_RS14930	COG0650	Formate hydrogenlyase subunit 4
FFM54_RS14935	COG0651	ATP synthesis coupled electron transport
FFM54_RS14975	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FFM54_RS14980	COG2181	nitrate reductase activity
FFM54_RS14985	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FFM54_RS14990	COG1140	nitrate reductase beta subunit
FFM54_RS14995	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FFM54_RS15005	COG3851	Histidine kinase
FFM54_RS15025	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FFM54_RS15050	COG2175	clavaminate synthase activity
FFM54_RS15070	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
FFM54_RS15095	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FFM54_RS15100	COG0339	signal peptide processing
FFM54_RS15120	COG0475	glutathione-regulated potassium exporter activity
FFM54_RS15190	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FFM54_RS15250	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FFM54_RS15270	COG0540	Belongs to the ATCase OTCase family
FFM54_RS15345	COG0477	Major facilitator Superfamily
FFM54_RS15350	COG0352	thiamine-phosphate diphosphorylase activity
FFM54_RS15365	COG0840	transmembrane signaling receptor activity
FFM54_RS15390	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS15395	COG4651	solute:proton antiporter activity
FFM54_RS15395	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FFM54_RS15450	COG1349	DNA-binding transcription factor activity
FFM54_RS15455	COG2223	nitrite transmembrane transporter activity
FFM54_RS15495	COG1063	alcohol dehydrogenase
FFM54_RS15500	COG3842	ATPase activity
FFM54_RS15510	COG1070	Carbohydrate kinase
FFM54_RS15520	COG1686	Belongs to the peptidase S11 family
FFM54_RS15540	COG2146	nitrite reductase [NAD(P)H] activity
FFM54_RS15545	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FFM54_RS15570	COG3485	protocatechuate 3,4-dioxygenase
FFM54_RS15575	COG3485	protocatechuate 3,4-dioxygenase
FFM54_RS15580	COG0583	DNA-binding transcription factor activity
FFM54_RS15595	COG4251	negative regulation of phosphorylation
FFM54_RS15595	COG5001	Diguanylate cyclase
FFM54_RS15595	COG2203	Gaf domain
FFM54_RS15595	COG3706	GGDEF domain
FFM54_RS15605	COG4122	O-methyltransferase activity
FFM54_RS15610	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FFM54_RS15685	COG2274	protein secretion by the type I secretion system
FFM54_RS15725	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FFM54_RS15755	COG1739	Uncharacterized protein family UPF0029
FFM54_RS15785	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS15825	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FFM54_RS15895	COG3264	Mechanosensitive ion channel
FFM54_RS15895	COG1511	domain protein
FFM54_RS15900	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FFM54_RS15900	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FFM54_RS15905	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FFM54_RS15910	COG0196	riboflavin kinase activity
FFM54_RS15915	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FFM54_RS15945	COG1113	amino acid transport
FFM54_RS15950	COG0542	response to heat
FFM54_RS15960	COG1278	Cold shock
FFM54_RS15965	COG2132	Multicopper oxidase
FFM54_RS15995	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FFM54_RS16030	COG0656	L-ascorbic acid biosynthetic process
FFM54_RS16035	COG2188	Transcriptional regulator
FFM54_RS16055	COG2814	Major facilitator Superfamily
FFM54_RS16120	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FFM54_RS16135	COG1663	tetraacyldisaccharide 4'-kinase activity
FFM54_RS16185	COG0728	peptidoglycan biosynthetic process
FFM54_RS16205	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FFM54_RS16225	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FFM54_RS16230	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS16235	COG4974	Belongs to the 'phage' integrase family
FFM54_RS16245	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FFM54_RS16250	COG0802	atpase or kinase
FFM54_RS16255	COG0860	N-Acetylmuramoyl-L-alanine amidase
FFM54_RS16265	COG1741	Belongs to the pirin family
FFM54_RS16270	COG3118	belongs to the thioredoxin family
FFM54_RS16280	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FFM54_RS16290	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FFM54_RS16300	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FFM54_RS16310	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FFM54_RS16315	COG1522	sequence-specific DNA binding
FFM54_RS16345	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FFM54_RS16350	COG1012	belongs to the aldehyde dehydrogenase family
FFM54_RS16360	COG0583	DNA-binding transcription factor activity
FFM54_RS16365	COG0246	Mannitol dehydrogenase
FFM54_RS16375	COG2390	Transcriptional regulator
FFM54_RS16390	COG0583	DNA-binding transcription factor activity
FFM54_RS16405	COG3842	ATPase activity
FFM54_RS16410	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FFM54_RS16420	COG1175	transmembrane transport
FFM54_RS16435	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFM54_RS16445	COG0735	belongs to the Fur family
FFM54_RS16455	COG1121	(ABC) transporter
FFM54_RS16460	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FFM54_RS16465	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
FFM54_RS16485	COG2233	PERMEase
FFM54_RS16510	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFM54_RS16545	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FFM54_RS16590	COG0009	L-threonylcarbamoyladenylate synthase
FFM54_RS16595	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FFM54_RS16600	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FFM54_RS16605	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FFM54_RS16615	COG0469	pyruvate kinase activity
FFM54_RS16625	COG0126	phosphoglycerate kinase activity
FFM54_RS16650	COG0859	PFAM glycosyl transferase family 9
FFM54_RS16660	COG0429	hydrolase of the alpha beta-hydrolase fold
FFM54_RS16700	COG3307	-O-antigen
FFM54_RS16705	COG4969	Belongs to the N-Me-Phe pilin family
FFM54_RS16710	COG0861	Integral membrane protein TerC family
FFM54_RS16715	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FFM54_RS16730	COG2137	regulation of response to DNA damage stimulus
FFM54_RS16735	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FFM54_RS16810	COG5002	protein histidine kinase activity
FFM54_RS16810	COG0784	Response regulator, receiver
FFM54_RS16815	COG0583	DNA-binding transcription factor activity
FFM54_RS16855	COG0028	Belongs to the TPP enzyme family
FFM54_RS16865	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FFM54_RS16950	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
FFM54_RS16955	COG0583	DNA-binding transcription factor activity
FFM54_RS16960	COG1301	dicarboxylic acid transport
FFM54_RS16975	COG0840	transmembrane signaling receptor activity
FFM54_RS17025	COG4948	Mandelate Racemase Muconate Lactonizing
FFM54_RS17100	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FFM54_RS17105	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FFM54_RS17120	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FFM54_RS17125	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FFM54_RS17130	COG0367	asparagine synthase
FFM54_RS17145	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FFM54_RS17155	COG1396	sequence-specific DNA binding
FFM54_RS17160	COG2814	Major facilitator Superfamily
FFM54_RS17165	COG0583	DNA-binding transcription factor activity
FFM54_RS17180	COG1702	phosphate starvation-inducible protein PhoH
FFM54_RS17195	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
FFM54_RS17210	COG0752	glycyl-tRNA synthetase alpha subunit
FFM54_RS17215	COG0751	glycine-tRNA ligase activity
FFM54_RS17220	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FFM54_RS17225	COG0204	Acyl-transferase
FFM54_RS17260	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FFM54_RS17280	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
FFM54_RS17290	COG5265	(ABC) transporter
FFM54_RS17310	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FFM54_RS17315	COG1024	Enoyl-CoA hydratase
FFM54_RS17320	COG0183	Belongs to the thiolase family
FFM54_RS17325	COG1024	Enoyl-CoA hydratase
FFM54_RS17325	COG1250	3-hydroxyacyl-CoA dehydrogenase
FFM54_RS17330	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS17345	COG0494	nUDIX hydrolase
FFM54_RS17425	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FFM54_RS17440	COG0251	oxidation-reduction process
FFM54_RS17445	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FFM54_RS17470	COG0477	Major facilitator Superfamily
FFM54_RS17515	COG1596	polysaccharide export
FFM54_RS17520	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FFM54_RS17540	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FFM54_RS17550	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FFM54_RS17570	COG2204	response regulator
FFM54_RS17605	COG0297	glycogen (starch) synthase activity
FFM54_RS17630	COG0235	Class ii aldolase
FFM54_RS17745	COG2814	Major facilitator Superfamily
FFM54_RS17780	COG1280	lysine exporter protein (LysE YggA)
FFM54_RS17805	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FFM54_RS17820	COG1137	ATPase activity
FFM54_RS17825	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FFM54_RS17835	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FFM54_RS17860	COG1194	a g-specific adenine glycosylase
FFM54_RS17875	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
FFM54_RS17890	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FFM54_RS17925	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FFM54_RS17940	COG0742	ribosomal rna small subunit methyltransferase
FFM54_RS17950	COG0625	glutathione transferase activity
FFM54_RS17960	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FFM54_RS17970	COG0243	molybdopterin cofactor binding
FFM54_RS17975	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FFM54_RS17990	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FFM54_RS18000	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FFM54_RS18010	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FFM54_RS18025	COG1294	oxidase, subunit
FFM54_RS18060	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FFM54_RS18065	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
FFM54_RS18070	COG2188	Transcriptional regulator
FFM54_RS18080	COG0583	DNA-binding transcription factor activity
FFM54_RS18135	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS18145	COG2226	methyltransferase
FFM54_RS18180	COG2814	Major facilitator Superfamily
FFM54_RS18195	COG0587	DNA-directed DNA polymerase activity
FFM54_RS18210	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FFM54_RS18240	COG0840	transmembrane signaling receptor activity
FFM54_RS18255	COG1999	signal sequence binding
FFM54_RS18265	COG1612	heme a metabolic process
FFM54_RS18295	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
FFM54_RS18305	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FFM54_RS18320	COG2226	methyltransferase
FFM54_RS18325	COG1040	competence protein
FFM54_RS18340	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FFM54_RS18360	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FFM54_RS18370	COG0793	Belongs to the peptidase S41A family
FFM54_RS18375	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FFM54_RS18385	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FFM54_RS18390	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FFM54_RS18400	COG0189	ligase activity
FFM54_RS18410	COG0004	ammonium transporteR
FFM54_RS18420	COG2960	long-chain fatty acid transporting porin activity
FFM54_RS18460	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FFM54_RS18470	COG4191	Histidine kinase
FFM54_RS18485	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FFM54_RS18500	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS18505	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS18510	COG1250	3-hydroxyacyl-CoA dehydrogenase
FFM54_RS18510	COG1024	Enoyl-CoA hydratase
FFM54_RS18515	COG0583	DNA-binding transcription factor activity
FFM54_RS18550	COG0583	DNA-binding transcription factor activity
FFM54_RS18555	COG2921	Belongs to the UPF0250 family
FFM54_RS18565	COG1686	Belongs to the peptidase S11 family
FFM54_RS18600	COG1127	ABC transporter
FFM54_RS18605	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FFM54_RS18610	COG0737	Belongs to the 5'-nucleotidase family
FFM54_RS18625	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
FFM54_RS18635	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FFM54_RS18660	COG1024	Enoyl-CoA hydratase
FFM54_RS18720	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FFM54_RS18725	COG4221	oxidoreductase activity
FFM54_RS18730	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS18750	COG0747	negative chemotaxis
FFM54_RS18755	COG0488	(ABC) transporter
FFM54_RS18775	COG0288	reversible hydration of carbon dioxide
FFM54_RS18780	COG0183	Belongs to the thiolase family
FFM54_RS18790	COG3012	SEC-C Motif Domain Protein
FFM54_RS18810	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FFM54_RS18840	COG1785	Belongs to the alkaline phosphatase family
FFM54_RS18855	COG2200	EAL domain
FFM54_RS18855	COG2199	diguanylate cyclase activity
FFM54_RS18860	COG0025	NhaP-type Na H and K H
FFM54_RS18980	COG3012	SEC-C Motif Domain Protein
FFM54_RS18985	COG4372	Transposase
FFM54_RS18990	COG3436	PFAM IS66 Orf2 family protein
FFM54_RS19000	COG2801	Transposase and inactivated derivatives
FFM54_RS19020	COG1401	restriction endodeoxyribonuclease activity
FFM54_RS19030	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
FFM54_RS19035	COG0732	type I restriction modification DNA specificity domain
FFM54_RS19065	COG0582	viral genome integration into host DNA
FFM54_RS19070	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FFM54_RS19090	COG1999	signal sequence binding
FFM54_RS19125	COG3511	phospholipase C
FFM54_RS19145	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FFM54_RS19185	COG0596	Alpha beta hydrolase
FFM54_RS19200	COG0583	DNA-binding transcription factor activity
FFM54_RS19205	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS19230	COG0840	transmembrane signaling receptor activity
FFM54_RS19235	COG1609	Transcriptional regulator
FFM54_RS19295	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FFM54_RS19315	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFM54_RS19320	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFM54_RS19340	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
FFM54_RS19345	COG1704	LemA family
FFM54_RS19470	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS19490	COG2824	Alkylphosphonate utilization operon protein PhnA
FFM54_RS19520	COG0583	DNA-binding transcription factor activity
FFM54_RS19530	COG2233	PERMEase
FFM54_RS19540	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
FFM54_RS19550	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
FFM54_RS19560	COG1706	bacterial-type flagellum-dependent cell motility
FFM54_RS19580	COG1749	Flagellar hook protein flgE
FFM54_RS19585	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
FFM54_RS19590	COG1558	bacterial-type flagellum-dependent cell motility
FFM54_RS19595	COG1815	bacterial-type flagellum-dependent cell motility
FFM54_RS19610	COG2747	anti-sigma28 factor FlgM
FFM54_RS19655	COG0741	lytic transglycosylase activity
FFM54_RS19660	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FFM54_RS19670	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FFM54_RS19675	COG1984	allophanate hydrolase subunit 2
FFM54_RS19705	COG4608	Belongs to the ABC transporter superfamily
FFM54_RS19710	COG0444	Belongs to the ABC transporter superfamily
FFM54_RS19715	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FFM54_RS19720	COG0601	transmembrane transport
FFM54_RS19725	COG0747	negative chemotaxis
FFM54_RS19745	COG0579	oxidoreductase
FFM54_RS19765	COG3568	Endonuclease Exonuclease Phosphatase
FFM54_RS19770	COG1280	lysine exporter protein (LysE YggA)
FFM54_RS19790	COG0531	amino acid
FFM54_RS19805	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FFM54_RS19865	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS19880	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
FFM54_RS19890	COG2814	Major facilitator Superfamily
FFM54_RS19910	COG0667	Aldo Keto reductase
FFM54_RS19940	COG1560	Kdo2-lipid A biosynthetic process
FFM54_RS19955	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FFM54_RS19965	COG0523	cobalamin synthesis protein
FFM54_RS19995	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FFM54_RS20025	COG1309	transcriptional regulator
FFM54_RS20045	COG2814	Major facilitator Superfamily
FFM54_RS20055	COG2207	Transcriptional regulator
FFM54_RS20060	COG1064	alcohol dehydrogenase
FFM54_RS20070	COG0708	Exodeoxyribonuclease III
FFM54_RS20075	COG2326	polyphosphate kinase activity
FFM54_RS20095	COG1077	Cell shape determining protein MreB Mrl
FFM54_RS20110	COG0768	penicillin binding
FFM54_RS20115	COG0772	Belongs to the SEDS family
FFM54_RS20140	COG0720	synthase
FFM54_RS20145	COG0602	queuosine metabolic process
FFM54_RS20165	COG2204	response regulator
FFM54_RS20170	COG5000	phosphorelay sensor kinase activity
FFM54_RS20180	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FFM54_RS20180	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FFM54_RS20200	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FFM54_RS20205	COG0242	peptide deformylase activity
FFM54_RS20210	COG0758	DNA mediated transformation
FFM54_RS20225	COG0583	DNA-binding transcription factor activity
FFM54_RS20230	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FFM54_RS20280	COG4695	Portal protein
FFM54_RS20295	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FFM54_RS20310	COG0583	DNA-binding transcription factor activity
FFM54_RS20340	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FFM54_RS20355	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FFM54_RS20355	COG2169	Transcriptional regulator
FFM54_RS20385	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FFM54_RS20450	COG0592	DNA-directed DNA polymerase activity
FFM54_RS20480	COG0753	catalase activity
FFM54_RS20525	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FFM54_RS20530	COG1024	Enoyl-CoA hydratase
FFM54_RS20530	COG1250	3-hydroxyacyl-CoA dehydrogenase
FFM54_RS20535	COG0183	Belongs to the thiolase family
FFM54_RS20545	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS20580	COG1695	Transcriptional regulator
FFM54_RS20660	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS20685	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS20700	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FFM54_RS20710	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FFM54_RS20720	COG4106	trans-aconitate 2-methyltransferase activity
FFM54_RS20720	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
FFM54_RS20725	COG0789	Transcriptional regulator
FFM54_RS20735	COG1987	bacterial-type flagellum assembly
FFM54_RS20750	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FFM54_RS20770	COG1346	cytolysis
FFM54_RS20780	COG0583	DNA-binding transcription factor activity
FFM54_RS20785	COG2814	Major facilitator Superfamily
FFM54_RS20790	COG1846	Transcriptional regulator
FFM54_RS20840	COG2165	general secretion pathway protein
FFM54_RS20860	COG1459	type II secretion system
FFM54_RS20885	COG0523	cobalamin synthesis protein
FFM54_RS20930	COG0519	Catalyzes the synthesis of GMP from XMP
FFM54_RS20930	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FFM54_RS20935	COG1902	pentaerythritol trinitrate reductase activity
FFM54_RS20955	COG0642	Histidine kinase
FFM54_RS20975	COG3186	Phenylalanine-4-hydroxylase
FFM54_RS20980	COG1522	sequence-specific DNA binding
FFM54_RS20995	COG0583	DNA-binding transcription factor activity
FFM54_RS21010	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
FFM54_RS21040	COG0559	Belongs to the binding-protein-dependent transport system permease family
FFM54_RS21085	COG1192	Involved in chromosome partitioning
FFM54_RS21090	COG1475	DNA binding
FFM54_RS21095	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FFM54_RS21110	COG0356	it plays a direct role in the translocation of protons across the membrane
FFM54_RS21150	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS21170	COG1832	CoA-binding protein
FFM54_RS21190	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FFM54_RS21210	COG0506	proline dehydrogenase activity
FFM54_RS21210	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FFM54_RS21210	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FFM54_RS21225	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS21245	COG0436	Aminotransferase
FFM54_RS21260	COG0277	FAD linked oxidase domain protein
FFM54_RS21270	COG0789	Transcriptional regulator
FFM54_RS21290	COG0668	transmembrane transport
FFM54_RS21310	COG0531	amino acid
FFM54_RS21315	COG4303	Ethanolamine ammonia lyase large subunit
FFM54_RS21320	COG4302	ethanolamine ammonia-lyase activity
FFM54_RS21330	COG1012	belongs to the aldehyde dehydrogenase family
FFM54_RS21360	COG1760	l-serine dehydratase
FFM54_RS21385	COG0509	glycine decarboxylation via glycine cleavage system
FFM54_RS21405	COG0673	inositol 2-dehydrogenase activity
FFM54_RS21425	COG0210	DNA helicase
FFM54_RS21430	COG3245	cytochrome
FFM54_RS21495	COG0582	viral genome integration into host DNA
FFM54_RS21540	COG0270	DNA (cytosine-5-)-methyltransferase activity
FFM54_RS21610	COG3397	chitin binding
FFM54_RS21635	COG2267	carboxylic ester hydrolase activity
FFM54_RS21710	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS21725	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FFM54_RS21765	COG0519	Catalyzes the synthesis of GMP from XMP
FFM54_RS21775	COG0561	phosphatase activity
FFM54_RS21780	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FFM54_RS21795	COG0438	transferase activity, transferring glycosyl groups
FFM54_RS21820	COG1360	Flagellar Motor Protein
FFM54_RS21825	COG2201	protein-glutamate methylesterase activity
FFM54_RS21845	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FFM54_RS21855	COG2201	protein-glutamate methylesterase activity
FFM54_RS21865	COG0745	RESPONSE REGULATOR receiver
FFM54_RS21870	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FFM54_RS21890	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FFM54_RS21895	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FFM54_RS21920	COG1950	PFAM Membrane protein of
FFM54_RS21925	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FFM54_RS21945	COG2070	2-Nitropropane dioxygenase
FFM54_RS21980	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FFM54_RS21985	COG1522	sequence-specific DNA binding
FFM54_RS21995	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FFM54_RS22020	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FFM54_RS22025	COG2823	Periplasmic or secreted lipoprotein
FFM54_RS22040	COG1113	amino acid transport
FFM54_RS22085	COG2084	Dehydrogenase
FFM54_RS22090	COG1280	lysine exporter protein (LysE YggA)
FFM54_RS22095	COG2814	Major facilitator Superfamily
FFM54_RS22100	COG0583	DNA-binding transcription factor activity
FFM54_RS22105	COG3047	cAMP biosynthetic process
FFM54_RS22125	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FFM54_RS22140	COG1881	PFAM PEBP family protein
FFM54_RS22145	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FFM54_RS22155	COG0280	phosphate acetyltransferase
FFM54_RS22155	COG0281	malic enzyme
FFM54_RS22180	COG1522	sequence-specific DNA binding
FFM54_RS22200	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FFM54_RS22205	COG2151	metal-sulfur cluster biosynthetic enzyme
FFM54_RS22210	COG3396	Phenylacetate-CoA oxygenase
FFM54_RS22215	COG3460	Phenylacetate-CoA oxygenase
FFM54_RS22220	COG3396	Phenylacetate-CoA oxygenase
FFM54_RS22300	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FFM54_RS22340	COG0514	ATP-dependent DNA helicase (RecQ)
FFM54_RS22475	COG0201	protein transport
FFM54_RS22520	COG4232	protein-disulfide reductase activity
FFM54_RS22540	COG1333	cytochrome c biogenesis protein
FFM54_RS22545	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FFM54_RS22550	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FFM54_RS22555	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FFM54_RS22610	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FFM54_RS22620	COG1175	transmembrane transport
FFM54_RS22625	COG0395	ABC-type sugar transport system, permease component
FFM54_RS22630	COG3842	ATPase activity
FFM54_RS22635	COG0584	glycerophosphoryl diester phosphodiesterase
FFM54_RS22650	COG0067	glutamate synthase
FFM54_RS22650	COG0069	glutamate synthase activity
FFM54_RS22650	COG0070	glutamate synthase
FFM54_RS22665	COG1115	amino acid carrier protein
FFM54_RS22675	COG4178	(ABC) transporter
FFM54_RS22700	COG1127	ABC transporter
FFM54_RS22705	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FFM54_RS22710	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FFM54_RS22735	COG1131	(ABC) transporter
FFM54_RS22740	COG0842	Transport permease protein
FFM54_RS22765	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FFM54_RS22775	COG2095	MarC family integral membrane protein
FFM54_RS22825	COG0805	protein transport
FFM54_RS22830	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FFM54_RS22835	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FFM54_RS22840	COG0723	plastoquinol--plastocyanin reductase activity
FFM54_RS22845	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FFM54_RS22850	COG2857	Cytochrome c1
FFM54_RS22855	COG0625	glutathione transferase activity
FFM54_RS22860	COG2969	positive regulation of protein catabolic process
FFM54_RS22900	COG0582	viral genome integration into host DNA
FFM54_RS23055	COG0308	aminopeptidase N
FFM54_RS23135	COG0443	Heat shock 70 kDa protein
FFM54_RS23145	COG1278	Cold shock
FFM54_RS23150	COG0531	amino acid
FFM54_RS23160	COG3384	dioxygenase
FFM54_RS23170	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FFM54_RS23175	COG2890	protein-(glutamine-N5) methyltransferase activity
FFM54_RS23205	COG0006	proline dipeptidase activity
FFM54_RS23210	COG1335	isochorismatase
FFM54_RS23225	COG0488	(ABC) transporter
FFM54_RS23240	COG0584	glycerophosphoryl diester phosphodiesterase
FFM54_RS23275	COG0012	GTP binding
FFM54_RS23305	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FFM54_RS23310	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FFM54_RS23325	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FFM54_RS23345	COG0512	Glutamine amidotransferase of anthranilate synthase
FFM54_RS23360	COG0546	phosphoglycolate phosphatase activity
FFM54_RS23365	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FFM54_RS23375	COG2967	ApaG domain
FFM54_RS23385	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
FFM54_RS23395	COG2050	protein possibly involved in aromatic compounds catabolism
FFM54_RS23400	COG1024	Enoyl-CoA hydratase
FFM54_RS23405	COG0183	Belongs to the thiolase family
FFM54_RS23415	COG1024	Enoyl-CoA hydratase
FFM54_RS23465	COG0243	molybdopterin cofactor binding
FFM54_RS23470	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS23475	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS23495	COG3116	cell division
FFM54_RS23505	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FFM54_RS23510	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FFM54_RS23545	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FFM54_RS23565	COG0678	peroxiredoxin activity
FFM54_RS23600	COG0494	nUDIX hydrolase
FFM54_RS23605	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
FFM54_RS23620	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FFM54_RS23630	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FFM54_RS23635	COG4536	flavin adenine dinucleotide binding
FFM54_RS23645	COG0142	geranyltranstransferase activity
FFM54_RS23695	COG2095	MarC family integral membrane protein
FFM54_RS23700	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
FFM54_RS23705	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FFM54_RS23760	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFM54_RS23765	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
FFM54_RS23780	COG0439	Biotin carboxylase
FFM54_RS23785	COG0511	ligase activity, forming carbon-carbon bonds
FFM54_RS23790	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FFM54_RS23795	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FFM54_RS23805	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FFM54_RS23810	COG3150	esterase
FFM54_RS23815	COG0557	exoribonuclease II activity
FFM54_RS23820	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FFM54_RS23825	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FFM54_RS23850	COG1414	Transcriptional regulator
FFM54_RS23855	COG3734	2-keto-3-deoxy-galactonokinase
FFM54_RS23865	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS23880	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFM54_RS23885	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS23895	COG0284	orotidine-5'-phosphate decarboxylase activity
FFM54_RS23900	COG1546	Belongs to the CinA family
FFM54_RS23905	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FFM54_RS23935	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FFM54_RS23945	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FFM54_RS23955	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FFM54_RS23965	COG2814	Major facilitator Superfamily
FFM54_RS23980	COG0583	DNA-binding transcription factor activity
FFM54_RS23995	COG1301	dicarboxylic acid transport
FFM54_RS24000	COG4266	Belongs to the allantoicase family
FFM54_RS24005	COG3194	Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source
FFM54_RS24010	COG0735	belongs to the Fur family
FFM54_RS24015	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FFM54_RS24045	COG1466	dna polymerase III delta subunit
FFM54_RS24050	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FFM54_RS24055	COG1981	membrane
FFM54_RS24070	COG1737	Transcriptional regulator
FFM54_RS24070	COG0837	glucose binding
FFM54_RS24085	COG0800	Aldolase
FFM54_RS24105	COG2223	nitrite transmembrane transporter activity
FFM54_RS24110	COG0583	DNA-binding transcription factor activity
FFM54_RS24120	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FFM54_RS24125	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFM54_RS24130	COG0765	amino acid transport
FFM54_RS24135	COG0765	amino acid transport
FFM54_RS24140	COG1126	abc transporter atp-binding protein
FFM54_RS24190	COG0121	glutamine amidotransferase
FFM54_RS24200	COG0418	dihydroorotase activity
FFM54_RS24240	COG1917	Cupin 2, conserved barrel domain protein
FFM54_RS24240	COG4977	sequence-specific DNA binding
FFM54_RS24245	COG0625	glutathione transferase activity
FFM54_RS24250	COG0625	glutathione transferase activity
FFM54_RS24265	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FFM54_RS24275	COG0588	phosphoglycerate mutase activity
FFM54_RS24315	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
FFM54_RS24320	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FFM54_RS24325	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FFM54_RS24330	COG0006	proline dipeptidase activity
FFM54_RS24340	COG0625	glutathione transferase activity
FFM54_RS24345	COG0069	glutamate synthase activity
FFM54_RS24440	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FFM54_RS24440	COG3008	intermembrane lipid transfer
FFM54_RS24445	COG2995	paraquat-inducible protein a
FFM54_RS24465	COG2353	YceI-like domain
FFM54_RS24470	COG2353	YceI-like domain
FFM54_RS24490	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FFM54_RS24500	COG1862	Preprotein translocase
FFM54_RS24515	COG0343	queuine tRNA-ribosyltransferase activity
FFM54_RS24555	COG0783	Belongs to the Dps family
FFM54_RS24585	COG2188	Transcriptional regulator
FFM54_RS24595	COG3624	Phosphonate C-P lyase system protein PhnG
FFM54_RS24605	COG3626	phosphonate metabolism
FFM54_RS24610	COG3627	carbon phosphorus lyase activity
FFM54_RS24615	COG4107	phosphonate C-P lyase system protein PhnK
FFM54_RS24630	COG3454	Phosphonate metabolism
FFM54_RS24635	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FFM54_RS24640	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FFM54_RS24645	COG3639	organic phosphonate transmembrane transporter activity
FFM54_RS24670	COG0247	lactate metabolic process
FFM54_RS24680	COG0277	FAD linked oxidase domain protein
FFM54_RS24685	COG0277	FAD linked oxidase domain protein
FFM54_RS24690	COG2096	Adenosyltransferase
FFM54_RS24695	COG1017	nitric oxide dioxygenase activity
FFM54_RS24695	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FFM54_RS24705	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FFM54_RS24715	COG0312	modulator of DNA gyrase
FFM54_RS24725	COG3164	Protein of unknown function
FFM54_RS24735	COG0497	DNA recombination
FFM54_RS24740	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FFM54_RS24780	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
FFM54_RS24790	COG1428	Deoxynucleoside kinase
FFM54_RS24795	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FFM54_RS24800	COG0617	tRNA 3'-terminal CCA addition
FFM54_RS24810	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FFM54_RS24845	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FFM54_RS24850	COG0586	Pfam SNARE associated Golgi protein
FFM54_RS24950	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FFM54_RS24965	COG1368	sulfuric ester hydrolase activity
FFM54_RS24970	COG0604	alcohol dehydrogenase
FFM54_RS24970	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS24970	COG3321	synthase
FFM54_RS24975	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FFM54_RS24980	COG0156	8-amino-7-oxononanoate synthase activity
FFM54_RS25030	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FFM54_RS25035	COG0489	protein tyrosine kinase activity
FFM54_RS25035	COG3206	protein involved in exopolysaccharide biosynthesis
FFM54_RS25045	COG3562	capsule polysaccharide
FFM54_RS25050	COG1045	serine acetyltransferase
FFM54_RS25065	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FFM54_RS25070	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FFM54_RS25075	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FFM54_RS25075	COG0517	IMP dehydrogenase activity
FFM54_RS25110	COG2885	chlorophyll binding
FFM54_RS25135	COG0824	Thioesterase
FFM54_RS25140	COG4221	oxidoreductase activity
FFM54_RS25200	COG0450	alkyl hydroperoxide reductase
FFM54_RS25210	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS25240	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FFM54_RS25250	COG2814	Major facilitator Superfamily
FFM54_RS25280	COG2814	Major facilitator Superfamily
FFM54_RS25285	COG0778	Nitroreductase
FFM54_RS25290	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FFM54_RS25295	COG0583	DNA-binding transcription factor activity
FFM54_RS25305	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FFM54_RS25340	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FFM54_RS25365	COG4774	siderophore transport
FFM54_RS25370	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FFM54_RS25380	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FFM54_RS25425	COG0730	response to heat
FFM54_RS25440	COG0584	glycerophosphoryl diester phosphodiesterase
FFM54_RS25445	COG1280	lysine exporter protein (LysE YggA)
FFM54_RS25505	COG0604	alcohol dehydrogenase
FFM54_RS25510	COG1733	regulation of RNA biosynthetic process
FFM54_RS25525	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FFM54_RS25540	COG1773	rubredoxin
FFM54_RS25560	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
FFM54_RS25635	COG1215	transferase activity, transferring glycosyl groups
FFM54_RS25650	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FFM54_RS25665	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FFM54_RS25695	COG0859	PFAM glycosyl transferase family 9
FFM54_RS25750	COG1129	ABC transporter
FFM54_RS25760	COG0559	Belongs to the binding-protein-dependent transport system permease family
FFM54_RS25775	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FFM54_RS25785	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FFM54_RS25795	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FFM54_RS25875	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FFM54_RS25895	COG2226	methyltransferase
FFM54_RS25925	COG0762	integral membrane protein
FFM54_RS25980	COG0436	Aminotransferase
FFM54_RS26010	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FFM54_RS26010	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FFM54_RS26035	COG2814	Major facilitator Superfamily
FFM54_RS26050	COG1126	abc transporter atp-binding protein
FFM54_RS26055	COG0765	amino acid transport
FFM54_RS26060	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFM54_RS26075	COG0363	glucosamine-6-phosphate deaminase activity
FFM54_RS26080	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FFM54_RS26090	COG1175	transmembrane transport
FFM54_RS26095	COG0395	ABC-type sugar transport system, permease component
FFM54_RS26100	COG3842	ATPase activity
FFM54_RS26105	COG2860	membrane
FFM54_RS26115	COG0492	ferredoxin-NADP+ reductase activity
FFM54_RS26120	COG1674	ftsk spoiiie
FFM54_RS26125	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FFM54_RS26130	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FFM54_RS26175	COG2894	cell division
FFM54_RS26195	COG0859	PFAM glycosyl transferase family 9
FFM54_RS26205	COG0477	Major facilitator Superfamily
FFM54_RS26235	COG0582	viral genome integration into host DNA
FFM54_RS26340	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FFM54_RS26345	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FFM54_RS26355	COG1561	YicC-like family, N-terminal region
FFM54_RS26370	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FFM54_RS26400	COG1278	Cold shock
FFM54_RS26405	COG2176	DNA-directed DNA polymerase activity
FFM54_RS26485	COG0583	DNA-binding transcription factor activity
FFM54_RS26510	COG2119	membrane
FFM54_RS26520	COG0402	S-adenosylhomocysteine deaminase activity
FFM54_RS26525	COG2252	PERMEase
FFM54_RS26530	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
FFM54_RS26550	COG0154	amidase activity
FFM54_RS26555	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FFM54_RS26595	COG3383	formate dehydrogenase (NAD+) activity
FFM54_RS26610	COG1910	domain protein
FFM54_RS26620	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FFM54_RS26700	COG0582	viral genome integration into host DNA
FFM54_RS26710	COG0546	phosphoglycolate phosphatase activity
FFM54_RS26740	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FFM54_RS26745	COG0077	Prephenate dehydratase
FFM54_RS26745	COG1605	Chorismate mutase
FFM54_RS26755	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FFM54_RS26780	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FFM54_RS26790	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FFM54_RS26815	COG2951	lytic endotransglycosylase activity
FFM54_RS26820	COG0123	including yeast histone deacetylase and acetoin utilization protein
FFM54_RS26830	COG2267	carboxylic ester hydrolase activity
FFM54_RS26840	COG2011	ABC-type metal ion transport system permease component
FFM54_RS26860	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS26865	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FFM54_RS26945	COG1162	GTPase activity
FFM54_RS26950	COG0501	Belongs to the peptidase M48B family
FFM54_RS26960	COG0521	Mo-molybdopterin cofactor biosynthetic process
FFM54_RS26965	COG3028	Belongs to the UPF0307 family
FFM54_RS26975	COG0312	modulator of DNA gyrase
FFM54_RS26980	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FFM54_RS26985	COG2204	response regulator
FFM54_RS27010	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FFM54_RS27030	COG0640	Transcriptional regulator
FFM54_RS27055	COG0114	fumarate hydratase activity
FFM54_RS27070	COG0534	Mate efflux family protein
FFM54_RS27075	COG2501	S4 domain
FFM54_RS27095	COG3045	CreA protein
FFM54_RS27110	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FFM54_RS27120	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FFM54_RS27140	COG1322	Protein conserved in bacteria
FFM54_RS27155	COG0303	'Molybdopterin
FFM54_RS27165	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FFM54_RS27185	COG0546	phosphoglycolate phosphatase activity
FFM54_RS27210	COG1399	metal-binding, possibly nucleic acid-binding protein
FFM54_RS27250	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FFM54_RS27270	COG3026	antisigma factor binding
FFM54_RS27275	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FFM54_RS27290	COG0681	Belongs to the peptidase S26 family
FFM54_RS27295	COG0571	ribonuclease III activity
FFM54_RS27300	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FFM54_RS27325	COG2204	response regulator
FFM54_RS27345	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FFM54_RS27440	COG1674	ftsk spoiiie
FFM54_RS27605	COG1956	GAF domain-containing protein
FFM54_RS27610	COG0583	DNA-binding transcription factor activity
FFM54_RS27625	COG2153	protein acetylation
FFM54_RS27655	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
FFM54_RS27660	COG1132	(ABC) transporter
FFM54_RS27665	COG0438	transferase activity, transferring glycosyl groups
FFM54_RS27680	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FFM54_RS27685	COG0683	leucine binding
FFM54_RS27695	COG3511	phospholipase C
FFM54_RS27705	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
FFM54_RS27715	COG0596	Alpha beta hydrolase
FFM54_RS27725	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FFM54_RS27740	COG3394	polysaccharide catabolic process
FFM54_RS27785	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FFM54_RS27820	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFM54_RS27830	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FFM54_RS27860	COG1959	2 iron, 2 sulfur cluster binding
FFM54_RS27875	COG2151	metal-sulfur cluster biosynthetic enzyme
FFM54_RS27880	COG0822	iron-sulfur transferase activity
FFM54_RS27885	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FFM54_RS27895	COG0396	ATPase activity
FFM54_RS27900	COG0719	Fe-S assembly protein
FFM54_RS27920	COG0840	transmembrane signaling receptor activity
FFM54_RS27925	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FFM54_RS27930	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FFM54_RS27955	COG0826	peptidase U32
FFM54_RS27960	COG0826	peptidase U32
FFM54_RS27965	COG3154	lipid carrier protein
FFM54_RS28010	COG2151	metal-sulfur cluster biosynthetic enzyme
FFM54_RS28035	COG0415	Belongs to the DNA photolyase family
FFM54_RS28040	COG0529	Catalyzes the synthesis of activated sulfate
FFM54_RS28090	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FFM54_RS28105	COG0402	S-adenosylhomocysteine deaminase activity
FFM54_RS28145	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FFM54_RS28150	COG0174	glutamine synthetase
FFM54_RS28180	COG0583	DNA-binding transcription factor activity
FFM54_RS28185	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS28200	COG0477	Major facilitator Superfamily
FFM54_RS28210	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FFM54_RS28210	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FFM54_RS28240	COG1058	Belongs to the CinA family
FFM54_RS28240	COG1546	Belongs to the CinA family
FFM54_RS28255	COG0174	glutamine synthetase
FFM54_RS28285	COG4585	Histidine kinase
FFM54_RS28290	COG2181	nitrate reductase activity
FFM54_RS28295	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FFM54_RS28300	COG1140	nitrate reductase beta subunit
FFM54_RS28305	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FFM54_RS28310	COG2223	nitrite transmembrane transporter activity
FFM54_RS28330	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FFM54_RS28335	COG0339	signal peptide processing
FFM54_RS28355	COG4566	intracellular signal transduction
FFM54_RS28365	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FFM54_RS28380	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FFM54_RS28410	COG1414	Transcriptional regulator
FFM54_RS28435	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FFM54_RS28445	COG1104	cysteine desulfurase activity
FFM54_RS28450	COG0822	iron-sulfur transferase activity
FFM54_RS28455	COG0316	Belongs to the HesB IscA family
FFM54_RS28475	COG2975	iron-sulfur cluster assembly
FFM54_RS28510	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FFM54_RS28530	COG1136	(ABC) transporter
FFM54_RS28535	COG0084	hydrolase, TatD family'
FFM54_RS28545	COG2267	carboxylic ester hydrolase activity
FFM54_RS28570	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
FFM54_RS28580	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FFM54_RS28590	COG2833	Protein of unknown function (DUF455)
FFM54_RS28600	COG0596	Alpha beta hydrolase
FFM54_RS28610	COG0613	PHP domain protein
FFM54_RS28615	COG0009	L-threonylcarbamoyladenylate synthase
FFM54_RS28620	COG1994	Peptidase M50
FFM54_RS28625	COG0180	Tryptophanyl-tRNA synthetase
FFM54_RS28635	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FFM54_RS28640	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FFM54_RS28645	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FFM54_RS28660	COG2850	peptidyl-arginine hydroxylation
FFM54_RS28705	COG0483	inositol monophosphate 1-phosphatase activity
FFM54_RS28720	COG1045	serine acetyltransferase
FFM54_RS28730	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FFM54_RS28740	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
FFM54_RS28765	COG0037	tRNA processing
FFM54_RS28775	COG0527	aspartate kinase activity
FFM54_RS28810	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFM54_RS28845	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
FFM54_RS28855	COG0583	DNA-binding transcription factor activity
FFM54_RS28865	COG2224	Isocitrate lyase
FFM54_RS28875	COG0513	Belongs to the DEAD box helicase family
FFM54_RS28895	COG1573	uracil-dna glycosylase
FFM54_RS28910	COG0351	phosphomethylpyrimidine kinase
FFM54_RS28915	COG0477	Major facilitator Superfamily
FFM54_RS28935	COG0488	(ABC) transporter
FFM54_RS28940	COG0386	Belongs to the glutathione peroxidase family
FFM54_RS28955	COG2890	protein-(glutamine-N5) methyltransferase activity
FFM54_RS28965	COG1393	Belongs to the ArsC family
FFM54_RS29010	COG0242	peptide deformylase activity
FFM54_RS29015	COG1187	pseudouridine synthase activity
FFM54_RS29055	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FFM54_RS29070	COG0750	zinc metalloprotease
FFM54_RS29110	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FFM54_RS29160	COG0330	HflC and HflK could
FFM54_RS29170	COG2867	negative regulation of translational initiation
FFM54_RS29180	COG0697	spore germination
FFM54_RS29220	COG0582	viral genome integration into host DNA
FFM54_RS29305	COG2814	Major facilitator Superfamily
FFM54_RS29345	COG1619	proteins homologs of microcin C7 resistance protein MccF
FFM54_RS29355	COG1953	Uracil, thiamine, allantoin
FFM54_RS29370	COG3648	Uricase
FFM54_RS29370	COG3195	allantoin biosynthetic process
FFM54_RS29375	COG4266	Belongs to the allantoicase family
FFM54_RS29390	COG2351	hydroxyisourate hydrolase activity
FFM54_RS29405	COG0583	DNA-binding transcription factor activity
FFM54_RS29415	COG3360	Dodecin
FFM54_RS29510	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FFM54_RS29525	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FFM54_RS29680	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FFM54_RS29690	COG1846	Transcriptional regulator
FFM54_RS29695	COG1929	Belongs to the glycerate kinase type-1 family
FFM54_RS29725	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FFM54_RS29800	COG4181	ATPase activity
FFM54_RS29820	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FFM54_RS29830	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FFM54_RS29830	COG0047	phosphoribosylformylglycinamidine synthase activity
FFM54_RS29840	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FFM54_RS29865	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS29875	COG1250	3-hydroxyacyl-CoA dehydrogenase
FFM54_RS29875	COG1024	Enoyl-CoA hydratase
FFM54_RS29880	COG1335	isochorismatase
FFM54_RS29885	COG0183	Belongs to the thiolase family
FFM54_RS29920	COG2130	NADP-dependent
FFM54_RS29925	COG0657	acetylesterase activity
FFM54_RS29940	COG0354	folic acid binding
FFM54_RS29945	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FFM54_RS29960	COG1247	-acetyltransferase
FFM54_RS29965	COG0084	hydrolase, TatD family'
FFM54_RS29995	COG0438	transferase activity, transferring glycosyl groups
FFM54_RS30030	COG0252	asparaginase activity
FFM54_RS30040	COG1652	LysM domain
FFM54_RS30050	COG2084	Dehydrogenase
FFM54_RS30055	COG3622	Belongs to the hyi family
FFM54_RS30060	COG3960	tartronate-semialdehyde synthase activity
FFM54_RS30065	COG0583	DNA-binding transcription factor activity
FFM54_RS30125	COG0306	phosphate transporter
FFM54_RS30140	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FFM54_RS30150	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FFM54_RS30155	COG0726	polysaccharide deacetylase
FFM54_RS30160	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FFM54_RS30160	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FFM54_RS30170	COG0463	Glycosyl transferase, family 2
FFM54_RS30175	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FFM54_RS30180	COG2076	Multidrug Resistance protein
FFM54_RS30185	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FFM54_RS30200	COG0436	Aminotransferase
FFM54_RS30230	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
FFM54_RS30235	COG0314	molybdopterin synthase activity
FFM54_RS30240	COG2346	COG2346, Truncated hemoglobins
FFM54_RS30245	COG1959	2 iron, 2 sulfur cluster binding
FFM54_RS30250	COG0542	response to heat
FFM54_RS30280	COG0534	Mate efflux family protein
FFM54_RS30305	COG3228	Belongs to the MtfA family
FFM54_RS30310	COG0477	Major facilitator Superfamily
FFM54_RS30315	COG0789	Transcriptional regulator
FFM54_RS30320	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FFM54_RS30360	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FFM54_RS30405	COG0670	Belongs to the BI1 family
FFM54_RS30440	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FFM54_RS30455	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FFM54_RS30465	COG0330	HflC and HflK could
FFM54_RS30490	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FFM54_RS30515	COG2183	response to ionizing radiation
FFM54_RS30540	COG0564	pseudouridine synthase activity
FFM54_RS30550	COG3243	poly(R)-hydroxyalkanoic acid synthase
FFM54_RS30555	COG0183	Belongs to the thiolase family
FFM54_RS30560	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS30585	COG0183	Belongs to the thiolase family
FFM54_RS30595	COG0626	cystathionine gamma-synthase activity
FFM54_RS30600	COG0560	Phosphoserine phosphatase
FFM54_RS30620	COG0390	transport system, permease component
FFM54_RS30625	COG1122	ATPase activity
FFM54_RS30640	COG0488	(ABC) transporter
FFM54_RS30660	COG2070	2-Nitropropane dioxygenase
FFM54_RS30665	COG3047	cAMP biosynthetic process
FFM54_RS30680	COG1914	H( )-stimulated, divalent metal cation uptake system
FFM54_RS30685	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
FFM54_RS30690	COG3842	ATPase activity
FFM54_RS30695	COG1176	ABC-type spermidine putrescine transport system, permease component I
FFM54_RS30700	COG1177	transmembrane transport
FFM54_RS30705	COG0730	response to heat
FFM54_RS30705	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FFM54_RS30730	COG3655	Transcriptional regulator
FFM54_RS30760	COG1538	Outer membrane efflux protein
FFM54_RS30765	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFM54_RS30780	COG0038	chloride channel
FFM54_RS30785	COG2855	membrane
FFM54_RS30805	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FFM54_RS30815	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FFM54_RS30825	COG1609	Transcriptional regulator
FFM54_RS30910	COG0598	Magnesium transport protein CorA
FFM54_RS30950	COG3264	Mechanosensitive ion channel
FFM54_RS30950	COG1196	nuclear chromosome segregation
FFM54_RS30985	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FFM54_RS31000	COG4263	nitrous-oxide reductase activity
FFM54_RS31025	COG0840	transmembrane signaling receptor activity
FFM54_RS31055	COG0475	glutathione-regulated potassium exporter activity
FFM54_RS31140	COG3121	Chaperone
FFM54_RS31205	COG2197	response regulator
FFM54_RS31280	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FFM54_RS31300	COG1176	ABC-type spermidine putrescine transport system, permease component I
FFM54_RS31310	COG3842	ATPase activity
FFM54_RS31325	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS31345	COG2916	Histone family protein nucleoid-structuring protein H-NS
FFM54_RS31375	COG2274	protein secretion by the type I secretion system
FFM54_RS31380	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FFM54_RS31390	COG0457	Tetratricopeptide repeat
FFM54_RS31390	COG0859	PFAM glycosyl transferase family 9
FFM54_RS31395	COG0529	Catalyzes the synthesis of activated sulfate
FFM54_RS31405	COG0745	RESPONSE REGULATOR receiver
FFM54_RS31415	COG3547	Transposase (IS116 IS110 IS902 family)
FFM54_RS31440	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS31450	COG2986	histidine ammonia-lyase
FFM54_RS31460	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FFM54_RS31475	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FFM54_RS31500	COG1595	DNA-templated transcription, initiation
FFM54_RS31505	COG4944	Protein of unknown function (DUF1109)
FFM54_RS31525	COG3220	belongs to the UPF0276 family
FFM54_RS31560	COG2192	nodulation
FFM54_RS31585	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FFM54_RS31605	COG0165	Argininosuccinate lyase
FFM54_RS31610	COG0137	argininosuccinate synthase activity
FFM54_RS31625	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FFM54_RS31635	COG3251	PFAM MbtH domain protein
FFM54_RS31645	COG3251	PFAM MbtH domain protein
FFM54_RS31670	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FFM54_RS31680	COG2207	Transcriptional regulator
FFM54_RS31690	COG0697	spore germination
FFM54_RS31695	COG0835	chemotaxis
FFM54_RS31725	COG0477	Major facilitator Superfamily
FFM54_RS31745	COG1732	Glycine betaine
FFM54_RS31750	COG1174	glycine betaine transport
FFM54_RS31785	COG2235	arginine
FFM54_RS31790	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FFM54_RS31815	COG0583	DNA-binding transcription factor activity
FFM54_RS31820	COG0625	glutathione transferase activity
FFM54_RS31840	COG1846	Transcriptional regulator
FFM54_RS31850	COG1649	PFAM Uncharacterised BCR, COG1649
FFM54_RS31870	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
FFM54_RS31900	COG3979	chitinase
FFM54_RS31920	COG0400	carboxylic ester hydrolase activity
FFM54_RS31955	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
FFM54_RS31970	COG1797	cobyrinic acid a,c-diamide synthase activity
FFM54_RS31980	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FFM54_RS31985	COG4774	siderophore transport
FFM54_RS31990	COG3486	L-lysine 6-monooxygenase (NADPH) activity
FFM54_RS32035	COG1120	ATPase activity
FFM54_RS32065	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS32075	COG1063	alcohol dehydrogenase
FFM54_RS32085	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFM54_RS32090	COG1129	ABC transporter
FFM54_RS32130	COG2718	Belongs to the UPF0229 family
FFM54_RS32135	COG2766	serine protein kinase
FFM54_RS32155	COG1609	Transcriptional regulator
FFM54_RS32165	COG1129	ABC transporter
FFM54_RS32170	COG1879	ABC-type sugar transport system periplasmic component
FFM54_RS32175	COG0583	DNA-binding transcription factor activity
FFM54_RS32180	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FFM54_RS32185	COG4208	sulfate ABC transporter
FFM54_RS32190	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FFM54_RS32195	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
FFM54_RS32245	COG0701	Predicted permease
FFM54_RS32250	COG0667	Aldo Keto reductase
FFM54_RS32280	COG1301	dicarboxylic acid transport
FFM54_RS32390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FFM54_RS32395	COG0765	amino acid transport
FFM54_RS32400	COG0673	inositol 2-dehydrogenase activity
FFM54_RS32405	COG1802	Transcriptional regulator
FFM54_RS32415	COG3023	N-Acetylmuramoyl-L-alanine amidase
FFM54_RS32425	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FFM54_RS32430	COG0557	exoribonuclease II activity
FFM54_RS32445	COG0840	transmembrane signaling receptor activity
FFM54_RS32475	COG0519	Catalyzes the synthesis of GMP from XMP
FFM54_RS32485	COG2814	Major facilitator Superfamily
FFM54_RS32495	COG0318	PFAM AMP-dependent synthetase and ligase
FFM54_RS32565	COG4964	Belongs to the GSP D family
FFM54_RS32625	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FFM54_RS32630	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FFM54_RS32640	COG0567	Dehydrogenase, E1 component
FFM54_RS32645	COG1217	gtp-binding protein TYPA
FFM54_RS32655	COG1846	Transcriptional regulator
FFM54_RS32665	COG1566	PFAM secretion protein HlyD family protein
FFM54_RS32670	COG2814	Major facilitator Superfamily
FFM54_RS32680	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FFM54_RS32695	COG0195	Participates in both transcription termination and antitermination
FFM54_RS32695	COG2251	uridine kinase activity
FFM54_RS32710	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FFM54_RS32715	COG0583	DNA-binding transcription factor activity
FFM54_RS32765	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FFM54_RS32790	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FFM54_RS32790	COG2755	lipolytic protein G-D-S-L family
FFM54_RS32805	COG0776	regulation of translation
FFM54_RS32810	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FFM54_RS32810	COG0072	phenylalanine-tRNA ligase activity
FFM54_RS32830	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FFM54_RS32845	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FFM54_RS32850	COG0251	oxidation-reduction process
FFM54_RS32855	COG2267	carboxylic ester hydrolase activity
FFM54_RS32865	COG0583	DNA-binding transcription factor activity
FFM54_RS32880	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS32935	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS32960	COG0477	Major facilitator Superfamily
FFM54_RS32985	COG1295	ribonuclease BN
FFM54_RS33000	COG0277	FAD linked oxidase domain protein
FFM54_RS33015	COG0583	DNA-binding transcription factor activity
FFM54_RS33045	COG0840	transmembrane signaling receptor activity
FFM54_RS33050	COG2223	nitrite transmembrane transporter activity
FFM54_RS33055	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FFM54_RS33060	COG0210	DNA helicase
FFM54_RS33065	COG0525	valine-tRNA ligase activity
FFM54_RS33070	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FFM54_RS33080	COG5002	protein histidine kinase activity
FFM54_RS33090	COG0745	RESPONSE REGULATOR receiver
FFM54_RS33100	COG0425	Belongs to the sulfur carrier protein TusA family
FFM54_RS33110	COG0673	inositol 2-dehydrogenase activity
FFM54_RS33115	COG0673	inositol 2-dehydrogenase activity
FFM54_RS33130	COG1172	Belongs to the binding-protein-dependent transport system permease family
FFM54_RS33155	COG3718	enzyme involved in inositol metabolism
FFM54_RS33175	COG0824	Thioesterase
FFM54_RS33200	COG2816	NAD+ diphosphatase activity
FFM54_RS33215	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FFM54_RS33225	COG0477	Major facilitator Superfamily
FFM54_RS33240	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FFM54_RS33250	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FFM54_RS33260	COG0494	nUDIX hydrolase
FFM54_RS33290	COG1858	cytochrome C peroxidase
FFM54_RS33295	COG3511	phospholipase C
FFM54_RS33300	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FFM54_RS33310	COG1566	PFAM secretion protein HlyD family protein
FFM54_RS33320	COG2814	Major facilitator Superfamily
FFM54_RS33325	COG1538	Outer membrane efflux protein
FFM54_RS33335	COG2197	response regulator
FFM54_RS33390	COG0583	DNA-binding transcription factor activity
FFM54_RS33400	COG2814	Major facilitator Superfamily
FFM54_RS33440	COG1914	H( )-stimulated, divalent metal cation uptake system
FFM54_RS33660	COG0745	RESPONSE REGULATOR receiver
FFM54_RS33665	COG0583	DNA-binding transcription factor activity
FFM54_RS33715	COG0366	Alpha amylase catalytic
FFM54_RS33720	COG0366	Alpha amylase catalytic
FFM54_RS33810	COG0582	viral genome integration into host DNA
FFM54_RS33835	COG4942	peptidase
FFM54_RS33840	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FFM54_RS33855	COG0534	Mate efflux family protein
FFM54_RS33935	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FFM54_RS33950	COG0745	RESPONSE REGULATOR receiver
FFM54_RS33965	COG0581	inorganic phosphate transmembrane transporter activity
FFM54_RS33970	COG0573	inorganic phosphate transmembrane transporter activity
FFM54_RS33975	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FFM54_RS33985	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FFM54_RS33990	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
FFM54_RS33995	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FFM54_RS34015	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FFM54_RS34020	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FFM54_RS34030	COG0505	Belongs to the CarA family
FFM54_RS34060	COG1388	LysM domain
FFM54_RS34060	COG0741	lytic transglycosylase activity
FFM54_RS34065	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FFM54_RS34070	COG2226	methyltransferase
FFM54_RS34075	COG0328	RNA-DNA hybrid ribonuclease activity
FFM54_RS34080	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FFM54_RS34100	COG0477	Major facilitator Superfamily
FFM54_RS34165	COG3052	prosthetic group binding
FFM54_RS34190	COG0583	DNA-binding transcription factor activity
FFM54_RS34200	COG1250	3-hydroxyacyl-CoA dehydrogenase
FFM54_RS34205	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
FFM54_RS34250	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FFM54_RS34285	COG0583	DNA-binding transcription factor activity
FFM54_RS34315	COG1522	sequence-specific DNA binding
FFM54_RS34380	COG1609	Transcriptional regulator
FFM54_RS34385	COG1840	ABC-type Fe3 transport system, periplasmic component
FFM54_RS34390	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FFM54_RS34405	COG1177	transmembrane transport
FFM54_RS34415	COG3842	ATPase activity
FFM54_RS34425	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FFM54_RS34450	COG2814	Major facilitator Superfamily
FFM54_RS34460	COG0697	spore germination
FFM54_RS34475	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FFM54_RS34480	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
FFM54_RS34535	COG2200	EAL domain
FFM54_RS34590	COG1840	ABC-type Fe3 transport system, periplasmic component
FFM54_RS34600	COG3842	ATPase activity
FFM54_RS34605	COG1522	sequence-specific DNA binding
FFM54_RS34625	COG1959	2 iron, 2 sulfur cluster binding
FFM54_RS34660	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFM54_RS34665	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FFM54_RS34705	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FFM54_RS34720	COG2010	Cytochrome c
FFM54_RS34720	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FFM54_RS34725	COG2863	cytochrome
FFM54_RS34760	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FFM54_RS34780	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FFM54_RS34795	COG0006	proline dipeptidase activity
FFM54_RS34870	COG2866	Carboxypeptidase
FFM54_RS34885	COG0436	Aminotransferase
FFM54_RS34895	COG1024	Enoyl-CoA hydratase
FFM54_RS34900	COG0588	phosphoglycerate mutase activity
FFM54_RS34910	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS34930	COG2030	dehydratase
FFM54_RS34930	COG1012	belongs to the aldehyde dehydrogenase family
FFM54_RS34935	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS34940	COG1960	acyl-CoA dehydrogenase activity
FFM54_RS34960	COG1007	ATP synthesis coupled electron transport
FFM54_RS34995	COG1034	ATP synthesis coupled electron transport
FFM54_RS35005	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FFM54_RS35040	COG0149	triose-phosphate isomerase activity
FFM54_RS35045	COG3321	synthase
FFM54_RS35045	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FFM54_RS35045	COG0604	alcohol dehydrogenase
FFM54_RS35045	COG4221	oxidoreductase activity
FFM54_RS35065	COG0683	leucine binding
FFM54_RS35080	COG0288	reversible hydration of carbon dioxide
FFM54_RS35085	COG0659	secondary active sulfate transmembrane transporter activity
FFM54_RS35095	COG1183	phosphatidylcholine synthase activity
FFM54_RS35115	COG0028	Belongs to the TPP enzyme family
FFM54_RS35150	COG0438	transferase activity, transferring glycosyl groups
FFM54_RS35170	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS35180	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FFM54_RS35190	COG0154	amidase activity
FFM54_RS35200	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FFM54_RS35235	COG0745	RESPONSE REGULATOR receiver
FFM54_RS35240	COG2205	protein histidine kinase activity
FFM54_RS35255	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FFM54_RS35260	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FFM54_RS35295	COG1028	Short-chain dehydrogenase reductase Sdr
FFM54_RS35315	COG0151	Belongs to the GarS family
FFM54_RS35330	COG0799	negative regulation of ribosome biogenesis
FFM54_RS35355	COG2233	PERMEase
FFM54_RS35410	COG1595	DNA-templated transcription, initiation
FFM54_RS35420	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FFM54_RS35465	COG0859	PFAM glycosyl transferase family 9
FFM54_RS35510	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FFM54_RS35520	COG0513	Belongs to the DEAD box helicase family
FFM54_RS35560	COG2706	6-phosphogluconolactonase activity
FFM54_RS35570	COG3387	PFAM Glycoside hydrolase 15-related
FFM54_RS35580	COG1309	transcriptional regulator
FFM54_RS35590	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FFM54_RS35630	COG3135	benzoate transporter
FFM54_RS35645	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FFM54_RS35660	COG4106	trans-aconitate 2-methyltransferase activity
FFM54_RS35685	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FFM54_RS35695	COG0697	spore germination
FFM54_RS35700	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FFM54_RS35795	COG0488	(ABC) transporter
FFM54_RS35805	COG1773	rubredoxin
FFM54_RS35990	COG0740	serine-type endopeptidase activity
FFM54_RS36100	COG0582	viral genome integration into host DNA
FFM54_RS36185	COG1881	PFAM PEBP family protein
FFM54_RS36190	COG2814	Major facilitator Superfamily
FFM54_RS36210	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
FFM54_RS36240	COG2801	Transposase and inactivated derivatives
FFM54_RS36335	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FFM54_RS36340	COG0477	Major facilitator Superfamily
FFM54_RS36345	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FFM54_RS36355	COG2192	nodulation
FFM54_RS36360	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FFM54_RS36405	COG1116	anion transmembrane transporter activity
FFM54_RS36410	COG1176	ABC-type spermidine putrescine transport system, permease component I
FFM54_RS36445	COG1741	Belongs to the pirin family
FFM54_RS36460	COG4215	(ABC) transporter
FFM54_RS36480	COG0347	Belongs to the P(II) protein family
FFM54_RS36510	COG2827	Endonuclease containing a URI domain
FFM54_RS36515	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FFM54_RS36530	COG2271	Major facilitator Superfamily
FFM54_RS36570	COG2226	methyltransferase
FFM54_RS36615	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FFM54_RS36640	COG0489	protein tyrosine kinase activity
FFM54_RS36650	COG2885	chlorophyll binding
FFM54_RS36650	COG3047	cAMP biosynthetic process
FFM54_RS36680	COG2911	Protein conserved in bacteria
FFM54_RS36685	COG0729	surface antigen
FFM54_RS36695	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FFM54_RS36715	COG0489	protein tyrosine kinase activity
FFM54_RS36720	COG2259	Doxx family
FFM54_RS36725	COG1492	cobalamin metabolic process
FFM54_RS36735	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
FFM54_RS36745	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FFM54_RS36765	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
FFM54_RS36770	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
FFM54_RS36775	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FFM54_RS36785	COG4206	TonB-dependent receptor
FFM54_RS36820	COG0583	DNA-binding transcription factor activity
FFM54_RS36835	COG4654	Cytochrome c, class I
FFM54_RS36855	COG0795	lipopolysaccharide-transporting ATPase activity
FFM54_RS36870	COG1648	precorrin-2 dehydrogenase activity
FFM54_RS36870	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FFM54_RS36875	COG2895	sulfate adenylyltransferase (ATP) activity
FFM54_RS36885	COG0175	sulfate reduction
FFM54_RS36900	COG0583	DNA-binding transcription factor activity
FFM54_RS36920	COG1396	sequence-specific DNA binding
FFM54_RS36930	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FFM54_RS36935	COG2258	MOSC domain
FFM54_RS36940	COG2267	carboxylic ester hydrolase activity
FFM54_RS36950	COG0583	DNA-binding transcription factor activity
FFM54_RS36960	COG1187	pseudouridine synthase activity
FFM54_RS36975	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FFM54_RS36975	COG0543	2 iron, 2 sulfur cluster binding
FFM54_RS36980	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FFM54_RS36985	COG0456	acetyltransferase
FFM54_RS37025	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FFM54_RS37030	COG1047	Peptidyl-prolyl cis-trans