locus-tag class description AQ475_RS00010 PF02767 DNA polymerase III beta subunit, central domain AQ475_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AQ475_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AQ475_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS00015 PF18053 DNA gyrase B subunit insert domain AQ475_RS00015 PF00204 DNA gyrase B AQ475_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus AQ475_RS00015 PF01751 Toprim domain AQ475_RS00025 PF00199 Catalase AQ475_RS00030 PF04542 Sigma-70 region 2 AQ475_RS00030 PF08281 Sigma-70, region 4 AQ475_RS00060 PF02515 CoA-transferase family III AQ475_RS00070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AQ475_RS00070 PF00378 Enoyl-CoA hydratase/isomerase AQ475_RS00070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AQ475_RS00075 PF02803 Thiolase, C-terminal domain AQ475_RS00075 PF00108 Thiolase, N-terminal domain AQ475_RS00085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ475_RS00085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS00085 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS00110 PF03551 Transcriptional regulator PadR-like family AQ475_RS00115 PF00732 GMC oxidoreductase AQ475_RS00115 PF05199 GMC oxidoreductase AQ475_RS00125 PF17409 MoaF C-terminal domain AQ475_RS00125 PF10703 MoaF N-terminal domain AQ475_RS00135 PF00171 Aldehyde dehydrogenase family AQ475_RS00150 PF11862 Domain of unknown function (DUF3382) AQ475_RS00150 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS00155 PF00005 ABC transporter AQ475_RS00155 PF12399 Branched-chain amino acid ATP-binding cassette transporter AQ475_RS00160 PF00005 ABC transporter AQ475_RS00170 PF13609 Gram-negative porin AQ475_RS00175 PF04851 Type III restriction enzyme, res subunit AQ475_RS00175 PF08774 VRR-NUC domain AQ475_RS00180 PF01555 DNA methylase AQ475_RS00180 PF18273 Type III R-M EcoP15I C-terminal domain AQ475_RS00185 PF13609 Gram-negative porin AQ475_RS00190 PF00072 Response regulator receiver domain AQ475_RS00190 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS00195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS00195 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS00200 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS00205 PF00005 ABC transporter AQ475_RS00215 PF01209 ubiE/COQ5 methyltransferase family AQ475_RS00220 PF09278 MerR, DNA binding AQ475_RS00220 PF00376 MerR family regulatory protein AQ475_RS00225 PF01311 Bacterial export proteins, family 1 AQ475_RS00230 PF01313 Bacterial export proteins, family 3 AQ475_RS00235 PF00813 FliP family AQ475_RS00240 PF04347 Flagellar biosynthesis protein, FliO AQ475_RS00245 PF16973 Flagellar motor switch protein FliN N-terminal AQ475_RS00245 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AQ475_RS00250 PF02154 Flagellar motor switch protein FliM AQ475_RS00250 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AQ475_RS00260 PF04172 LrgB-like family AQ475_RS00265 PF03788 LrgA family AQ475_RS00270 PF03466 LysR substrate binding domain AQ475_RS00270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS00275 PF07690 Major Facilitator Superfamily AQ475_RS00280 PF01047 MarR family AQ475_RS00290 PF02321 Outer membrane efflux protein AQ475_RS00310 PF03934 Type II secretion system (T2SS), protein K AQ475_RS00315 PF11612 Type II secretion system (T2SS), protein J AQ475_RS00315 PF07963 Prokaryotic N-terminal methylation motif AQ475_RS00320 PF07963 Prokaryotic N-terminal methylation motif AQ475_RS00320 PF02501 Type II secretion system (T2SS), protein I AQ475_RS00325 PF12019 Type II transport protein GspH AQ475_RS00325 PF07963 Prokaryotic N-terminal methylation motif AQ475_RS00330 PF07963 Prokaryotic N-terminal methylation motif AQ475_RS00330 PF08334 Type II secretion system (T2SS), protein G AQ475_RS00340 PF00482 Type II secretion system (T2SS), protein F AQ475_RS00345 PF00437 Type II/IV secretion system protein AQ475_RS00350 PF03958 Bacterial type II/III secretion system short domain AQ475_RS00350 PF00263 Bacterial type II and III secretion system protein AQ475_RS00355 PF01464 Transglycosylase SLT domain AQ475_RS00360 PF07683 Cobalamin synthesis protein cobW C-terminal domain AQ475_RS00360 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ475_RS00365 PF00216 Bacterial DNA-binding protein AQ475_RS00370 PF01266 FAD dependent oxidoreductase AQ475_RS00370 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AQ475_RS00380 PF04107 Glutamate-cysteine ligase family 2(GCS2) AQ475_RS00390 PF00117 Glutamine amidotransferase class-I AQ475_RS00390 PF02540 NAD synthase AQ475_RS00390 PF00958 GMP synthase C terminal domain AQ475_RS00395 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AQ475_RS00410 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS00410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS00410 PF08521 Two-component sensor kinase N-terminal AQ475_RS00415 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS00415 PF00072 Response regulator receiver domain AQ475_RS00425 PF01329 Pterin 4 alpha carbinolamine dehydratase AQ475_RS00430 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AQ475_RS00435 PF01037 Lrp/AsnC ligand binding domain AQ475_RS00445 PF03466 LysR substrate binding domain AQ475_RS00445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS00450 PF00171 Aldehyde dehydrogenase family AQ475_RS00455 PF05199 GMC oxidoreductase AQ475_RS00455 PF00732 GMC oxidoreductase AQ475_RS00460 PF00005 ABC transporter AQ475_RS00460 PF12399 Branched-chain amino acid ATP-binding cassette transporter AQ475_RS00465 PF00005 ABC transporter AQ475_RS00475 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS00500 PF00005 ABC transporter AQ475_RS00500 PF12399 Branched-chain amino acid ATP-binding cassette transporter AQ475_RS00505 PF00005 ABC transporter AQ475_RS00510 PF13932 GidA associated domain AQ475_RS00510 PF01134 Glucose inhibited division protein A AQ475_RS00515 PF02527 rRNA small subunit methyltransferase G AQ475_RS00520 PF13614 AAA domain AQ475_RS00525 PF17762 HTH domain found in ParB protein AQ475_RS00525 PF02195 ParB-like nuclease domain AQ475_RS00530 PF03600 Citrate transporter AQ475_RS00540 PF00119 ATP synthase A chain AQ475_RS00545 PF00137 ATP synthase subunit C AQ475_RS00550 PF00430 ATP synthase B/B' CF(0) AQ475_RS00555 PF00213 ATP synthase delta (OSCP) subunit AQ475_RS00560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ475_RS00560 PF02874 ATP synthase alpha/beta family, beta-barrel domain AQ475_RS00560 PF00306 ATP synthase alpha/beta chain, C terminal domain AQ475_RS00565 PF00231 ATP synthase AQ475_RS00570 PF02874 ATP synthase alpha/beta family, beta-barrel domain AQ475_RS00570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ475_RS00575 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AQ475_RS00575 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AQ475_RS00580 PF00501 AMP-binding enzyme AQ475_RS00580 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS00585 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ475_RS00590 PF01208 Uroporphyrinogen decarboxylase (URO-D) AQ475_RS00595 PF17764 3′ DNA-binding domain (3′BD) AQ475_RS00595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AQ475_RS00595 PF18074 Primosomal protein N C-terminal domain AQ475_RS00595 PF00271 Helicase conserved C-terminal domain AQ475_RS00595 PF00270 DEAD/DEAH box helicase AQ475_RS00605 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AQ475_RS00605 PF14850 DNA-binding domain of Proline dehydrogenase AQ475_RS00605 PF01619 Proline dehydrogenase AQ475_RS00605 PF00171 Aldehyde dehydrogenase family AQ475_RS00610 PF13458 Periplasmic binding protein AQ475_RS00615 PF00501 AMP-binding enzyme AQ475_RS00615 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS00620 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS00620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS00620 PF18158 Adaptive response protein AidB N-terminal domain AQ475_RS00630 PF00155 Aminotransferase class I and II AQ475_RS00635 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ475_RS00650 PF13411 MerR HTH family regulatory protein AQ475_RS00655 PF00403 Heavy-metal-associated domain AQ475_RS00670 PF05552 Conserved TM helix AQ475_RS00680 PF13520 Amino acid permease AQ475_RS00685 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AQ475_RS00690 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AQ475_RS00695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS00695 PF03466 LysR substrate binding domain AQ475_RS00705 PF00171 Aldehyde dehydrogenase family AQ475_RS00710 PF12833 Helix-turn-helix domain AQ475_RS00720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ475_RS00720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ475_RS00720 PF00205 Thiamine pyrophosphate enzyme, central domain AQ475_RS00725 PF03313 Serine dehydratase alpha chain AQ475_RS00725 PF03315 Serine dehydratase beta chain AQ475_RS00740 PF02347 Glycine cleavage system P-protein AQ475_RS00745 PF01597 Glycine cleavage H-protein AQ475_RS00750 PF01571 Aminomethyltransferase folate-binding domain AQ475_RS00750 PF08669 Glycine cleavage T-protein C-terminal barrel domain AQ475_RS00760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AQ475_RS00760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AQ475_RS00775 PF13361 UvrD-like helicase C-terminal domain AQ475_RS00775 PF00580 UvrD/REP helicase N-terminal domain AQ475_RS00780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AQ475_RS00790 PF00589 Phage integrase family AQ475_RS00805 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AQ475_RS00805 PF18416 N-acetylglucosamine binding protein domain 2 AQ475_RS00810 PF01565 FAD binding domain AQ475_RS00810 PF08031 Berberine and berberine like AQ475_RS00820 PF00132 Bacterial transferase hexapeptide (six repeats) AQ475_RS00840 PF08889 WbqC-like protein family AQ475_RS00845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AQ475_RS00855 PF00672 HAMP domain AQ475_RS00855 PF02203 Tar ligand binding domain homologue AQ475_RS00855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ475_RS00865 PF12697 Alpha/beta hydrolase family AQ475_RS00880 PF03783 Curli production assembly/transport component CsgG AQ475_RS00890 PF05643 Putative bacterial lipoprotein (DUF799) AQ475_RS00900 PF04185 Phosphoesterase family AQ475_RS00925 PF00669 Bacterial flagellin N-terminal helical region AQ475_RS00925 PF00700 Bacterial flagellin C-terminal helical region AQ475_RS00930 PF01165 Ribosomal protein S21 AQ475_RS00935 PF03352 Methyladenine glycosylase AQ475_RS00950 PF00230 Major intrinsic protein AQ475_RS00955 PF00816 H-NS histone family AQ475_RS00960 PF13439 Glycosyltransferase Family 4 AQ475_RS00965 PF05247 Flagellar transcriptional activator (FlhD) AQ475_RS00970 PF05280 Flagellar transcriptional activator (FlhC) AQ475_RS00980 PF01618 MotA/TolQ/ExbB proton channel family AQ475_RS00985 PF00691 OmpA family AQ475_RS00985 PF13677 Membrane MotB of proton-channel complex MotA/MotB AQ475_RS00990 PF00196 Bacterial regulatory proteins, luxR family AQ475_RS00990 PF00072 Response regulator receiver domain AQ475_RS00995 PF01627 Hpt domain AQ475_RS00995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS00995 PF01584 CheW-like domain AQ475_RS00995 PF02895 Signal transducing histidine kinase, homodimeric domain AQ475_RS00995 PF09078 CheY binding AQ475_RS01000 PF01584 CheW-like domain AQ475_RS01005 PF00672 HAMP domain AQ475_RS01005 PF02203 Tar ligand binding domain homologue AQ475_RS01005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ475_RS01010 PF03705 CheR methyltransferase, all-alpha domain AQ475_RS01010 PF01739 CheR methyltransferase, SAM binding domain AQ475_RS01015 PF03975 CheD chemotactic sensory transduction AQ475_RS01020 PF00072 Response regulator receiver domain AQ475_RS01020 PF01339 CheB methylesterase AQ475_RS01025 PF00072 Response regulator receiver domain AQ475_RS01030 PF04344 Chemotaxis phosphatase, CheZ AQ475_RS01050 PF01593 Flavin containing amine oxidoreductase AQ475_RS01055 PF01312 FlhB HrpN YscU SpaS Family AQ475_RS01060 PF00771 FHIPEP family AQ475_RS01065 PF00448 SRP54-type protein, GTPase domain AQ475_RS01065 PF00448 SRP54-type protein, GTPase domain AQ475_RS01070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AQ475_RS01075 PF04539 Sigma-70 region 3 AQ475_RS01075 PF04542 Sigma-70 region 2 AQ475_RS01075 PF04545 Sigma-70, region 4 AQ475_RS01080 PF05221 S-adenosyl-L-homocysteine hydrolase AQ475_RS01080 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AQ475_RS01085 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AQ475_RS01090 PF02219 Methylenetetrahydrofolate reductase AQ475_RS01095 PF01425 Amidase AQ475_RS01100 PF01738 Dienelactone hydrolase family AQ475_RS01105 PF03060 Nitronate monooxygenase AQ475_RS01110 PF13458 Periplasmic binding protein AQ475_RS01115 PF07690 Major Facilitator Superfamily AQ475_RS01130 PF16916 Dimerisation domain of Zinc Transporter AQ475_RS01130 PF01545 Cation efflux family AQ475_RS01135 PF01037 Lrp/AsnC ligand binding domain AQ475_RS01145 PF00753 Metallo-beta-lactamase superfamily AQ475_RS01150 PF03330 Lytic transglycolase AQ475_RS01150 PF05036 Sporulation related domain AQ475_RS01155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ475_RS01160 PF02021 Uncharacterised protein family UPF0102 AQ475_RS01165 PF13580 SIS domain AQ475_RS01170 PF04972 BON domain AQ475_RS01175 PF00034 Cytochrome c AQ475_RS01185 PF00324 Amino acid permease AQ475_RS01215 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ475_RS01215 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AQ475_RS01220 PF01810 LysE type translocator AQ475_RS01225 PF07690 Major Facilitator Superfamily AQ475_RS01230 PF03466 LysR substrate binding domain AQ475_RS01230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS01235 PF01610 Transposase AQ475_RS01235 PF13542 Helix-turn-helix domain of transposase family ISL3 AQ475_RS01235 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AQ475_RS01255 PF01118 Semialdehyde dehydrogenase, NAD binding domain AQ475_RS01260 PF03358 NADPH-dependent FMN reductase AQ475_RS01265 PF01161 Phosphatidylethanolamine-binding protein AQ475_RS01270 PF00156 Phosphoribosyl transferase domain AQ475_RS01275 PF03949 Malic enzyme, NAD binding domain AQ475_RS01275 PF00390 Malic enzyme, N-terminal domain AQ475_RS01275 PF01515 Phosphate acetyl/butaryl transferase AQ475_RS01290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ475_RS01295 PF01037 Lrp/AsnC ligand binding domain AQ475_RS01295 PF13404 AsnC-type helix-turn-helix domain AQ475_RS01305 PF00440 Bacterial regulatory proteins, tetR family AQ475_RS01305 PF17932 Tetracyclin repressor-like, C-terminal domain AQ475_RS01315 PF00970 Oxidoreductase FAD-binding domain AQ475_RS01315 PF00111 2Fe-2S iron-sulfur cluster binding domain AQ475_RS01315 PF00175 Oxidoreductase NAD-binding domain AQ475_RS01320 PF01883 Iron-sulfur cluster assembly protein AQ475_RS01325 PF05138 Phenylacetic acid catabolic protein AQ475_RS01330 PF06243 Phenylacetic acid degradation B AQ475_RS01335 PF05138 Phenylacetic acid catabolic protein AQ475_RS01375 PF05717 IS66 Orf2 like protein AQ475_RS01395 PF03144 Elongation factor Tu domain 2 AQ475_RS01395 PF03143 Elongation factor Tu C-terminal domain AQ475_RS01395 PF00009 Elongation factor Tu GTP binding domain AQ475_RS01405 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AQ475_RS01410 PF00467 KOW motif AQ475_RS01410 PF02357 Transcription termination factor nusG AQ475_RS01415 PF03946 Ribosomal protein L11, N-terminal domain AQ475_RS01415 PF00298 Ribosomal protein L11, RNA binding domain AQ475_RS01420 PF00687 Ribosomal protein L1p/L10e family AQ475_RS01425 PF00466 Ribosomal protein L10 AQ475_RS01430 PF00542 Ribosomal protein L7/L12 C-terminal domain AQ475_RS01430 PF16320 Ribosomal protein L7/L12 dimerisation domain AQ475_RS01435 PF04561 RNA polymerase Rpb2, domain 2 AQ475_RS01435 PF04565 RNA polymerase Rpb2, domain 3 AQ475_RS01435 PF00562 RNA polymerase Rpb2, domain 6 AQ475_RS01435 PF04560 RNA polymerase Rpb2, domain 7 AQ475_RS01435 PF04563 RNA polymerase beta subunit AQ475_RS01435 PF10385 RNA polymerase beta subunit external 1 domain AQ475_RS01440 PF04997 RNA polymerase Rpb1, domain 1 AQ475_RS01440 PF04998 RNA polymerase Rpb1, domain 5 AQ475_RS01440 PF05000 RNA polymerase Rpb1, domain 4 AQ475_RS01440 PF04983 RNA polymerase Rpb1, domain 3 AQ475_RS01440 PF00623 RNA polymerase Rpb1, domain 2 AQ475_RS01445 PF16124 RecQ zinc-binding AQ475_RS01445 PF09382 RQC domain AQ475_RS01445 PF00270 DEAD/DEAH box helicase AQ475_RS01445 PF00570 HRDC domain AQ475_RS01445 PF00271 Helicase conserved C-terminal domain AQ475_RS01450 PF00164 Ribosomal protein S12/S23 AQ475_RS01455 PF00177 Ribosomal protein S7p/S5e AQ475_RS01460 PF00009 Elongation factor Tu GTP binding domain AQ475_RS01460 PF03764 Elongation factor G, domain IV AQ475_RS01460 PF14492 Elongation Factor G, domain II AQ475_RS01460 PF00679 Elongation factor G C-terminus AQ475_RS01460 PF03144 Elongation factor Tu domain 2 AQ475_RS01465 PF03144 Elongation factor Tu domain 2 AQ475_RS01465 PF03143 Elongation factor Tu C-terminal domain AQ475_RS01465 PF00009 Elongation factor Tu GTP binding domain AQ475_RS01470 PF00338 Ribosomal protein S10p/S20e AQ475_RS01475 PF00297 Ribosomal protein L3 AQ475_RS01480 PF00573 Ribosomal protein L4/L1 family AQ475_RS01485 PF00276 Ribosomal protein L23 AQ475_RS01490 PF03947 Ribosomal Proteins L2, C-terminal domain AQ475_RS01490 PF00181 Ribosomal Proteins L2, RNA binding domain AQ475_RS01495 PF00203 Ribosomal protein S19 AQ475_RS01500 PF00237 Ribosomal protein L22p/L17e AQ475_RS01505 PF07650 KH domain AQ475_RS01505 PF00189 Ribosomal protein S3, C-terminal domain AQ475_RS01510 PF00252 Ribosomal protein L16p/L10e AQ475_RS01515 PF00831 Ribosomal L29 protein AQ475_RS01520 PF00366 Ribosomal protein S17 AQ475_RS01525 PF00238 Ribosomal protein L14p/L23e AQ475_RS01530 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AQ475_RS01535 PF00281 Ribosomal protein L5 AQ475_RS01535 PF00673 ribosomal L5P family C-terminus AQ475_RS01540 PF00253 Ribosomal protein S14p/S29e AQ475_RS01545 PF00410 Ribosomal protein S8 AQ475_RS01550 PF00347 Ribosomal protein L6 AQ475_RS01555 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AQ475_RS01560 PF00333 Ribosomal protein S5, N-terminal domain AQ475_RS01560 PF03719 Ribosomal protein S5, C-terminal domain AQ475_RS01565 PF00327 Ribosomal protein L30p/L7e AQ475_RS01570 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AQ475_RS01575 PF00344 SecY translocase AQ475_RS01580 PF01176 Translation initiation factor 1A / IF-1 AQ475_RS01585 PF00444 Ribosomal protein L36 AQ475_RS01590 PF00416 Ribosomal protein S13/S18 AQ475_RS01595 PF00411 Ribosomal protein S11 AQ475_RS01600 PF00163 Ribosomal protein S4/S9 N-terminal domain AQ475_RS01600 PF01479 S4 domain AQ475_RS01605 PF01000 RNA polymerase Rpb3/RpoA insert domain AQ475_RS01605 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AQ475_RS01605 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AQ475_RS01610 PF01196 Ribosomal protein L17 AQ475_RS01620 PF02683 Cytochrome C biogenesis protein transmembrane region AQ475_RS01620 PF11412 Disulphide bond corrector protein DsbC AQ475_RS01625 PF00490 Delta-aminolevulinic acid dehydratase AQ475_RS01630 PF01926 50S ribosome-binding GTPase AQ475_RS01635 PF00034 Cytochrome c AQ475_RS01640 PF05140 ResB-like family AQ475_RS01645 PF01578 Cytochrome C assembly protein AQ475_RS01650 PF00174 Oxidoreductase molybdopterin binding domain AQ475_RS01655 PF01794 Ferric reductase like transmembrane component AQ475_RS01660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AQ475_RS01660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AQ475_RS01670 PF01491 Frataxin-like domain AQ475_RS01675 PF17092 Penicillin-binding protein OB-like domain AQ475_RS01675 PF00905 Penicillin binding protein transpeptidase domain AQ475_RS01675 PF00912 Transglycosylase AQ475_RS01695 PF11741 AMIN domain AQ475_RS01695 PF07660 Secretin and TonB N terminus short domain AQ475_RS01695 PF03958 Bacterial type II/III secretion system short domain AQ475_RS01695 PF00263 Bacterial type II and III secretion system protein AQ475_RS01700 PF01202 Shikimate kinase AQ475_RS01705 PF01761 3-dehydroquinate synthase AQ475_RS01710 PF13286 Phosphohydrolase-associated domain AQ475_RS01710 PF01966 HD domain AQ475_RS01715 PF13416 Bacterial extracellular solute-binding protein AQ475_RS01720 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS01725 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS01730 PF17912 MalK OB fold domain AQ475_RS01730 PF00005 ABC transporter AQ475_RS01735 PF03009 Glycerophosphoryl diester phosphodiesterase family AQ475_RS01750 PF01493 GXGXG motif AQ475_RS01750 PF01645 Conserved region in glutamate synthase AQ475_RS01750 PF00310 Glutamine amidotransferases class-II AQ475_RS01750 PF04898 Glutamate synthase central domain AQ475_RS01755 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AQ475_RS01755 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ475_RS01760 PF01235 Sodium:alanine symporter family AQ475_RS01775 PF00005 ABC transporter AQ475_RS01775 PF06472 ABC transporter transmembrane region 2 AQ475_RS01780 PF01266 FAD dependent oxidoreductase AQ475_RS01790 PF05690 Thiazole biosynthesis protein ThiG AQ475_RS01795 PF02581 Thiamine monophosphate synthase AQ475_RS01800 PF00005 ABC transporter AQ475_RS01805 PF02405 Permease MlaE AQ475_RS01810 PF02470 MlaD protein AQ475_RS01830 PF00005 ABC transporter AQ475_RS01835 PF01061 ABC-2 type transporter AQ475_RS01845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AQ475_RS01850 PF01634 ATP phosphoribosyltransferase AQ475_RS01855 PF00815 Histidinol dehydrogenase AQ475_RS01860 PF00155 Aminotransferase class I and II AQ475_RS01865 PF00475 Imidazoleglycerol-phosphate dehydratase AQ475_RS01870 PF01914 MarC family integral membrane protein AQ475_RS01875 PF00117 Glutamine amidotransferase class-I AQ475_RS01880 PF00977 Histidine biosynthesis protein AQ475_RS01885 PF00977 Histidine biosynthesis protein AQ475_RS01890 PF01502 Phosphoribosyl-AMP cyclohydrolase AQ475_RS01895 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AQ475_RS01910 PF02416 mttA/Hcf106 family AQ475_RS01915 PF02416 mttA/Hcf106 family AQ475_RS01920 PF00902 Sec-independent protein translocase protein (TatC) AQ475_RS01925 PF13180 PDZ domain AQ475_RS01925 PF17820 PDZ domain AQ475_RS01930 PF01784 NIF3 (NGG1p interacting factor 3) AQ475_RS01935 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AQ475_RS01935 PF00355 Rieske [2Fe-2S] domain AQ475_RS01940 PF00033 Cytochrome b/b6/petB AQ475_RS01940 PF00032 Cytochrome b(C-terminal)/b6/petD AQ475_RS01945 PF02167 Cytochrome C1 family AQ475_RS01950 PF02798 Glutathione S-transferase, N-terminal domain AQ475_RS01950 PF00043 Glutathione S-transferase, C-terminal domain AQ475_RS01955 PF04386 Stringent starvation protein B AQ475_RS01965 PF00589 Phage integrase family AQ475_RS01965 PF14659 Phage integrase, N-terminal SAM-like domain AQ475_RS01965 PF13356 Arm DNA-binding domain AQ475_RS01970 PF08401 Domain of unknown function (DUF1738) AQ475_RS01970 PF18818 Metallopeptidase superfamily domain AQ475_RS01970 PF13362 Toprim domain AQ475_RS02020 PF00239 Resolvase, N terminal domain AQ475_RS02020 PF02796 Helix-turn-helix domain of resolvase AQ475_RS02025 PF02384 N-6 DNA Methylase AQ475_RS02030 PF12161 HsdM N-terminal domain AQ475_RS02030 PF02384 N-6 DNA Methylase AQ475_RS02040 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AQ475_RS02040 PF18766 SWI2/SNF2 ATPase AQ475_RS02040 PF11867 Domain of unknown function (DUF3387) AQ475_RS02045 PF01527 Transposase AQ475_RS02050 PF13333 Integrase core domain AQ475_RS02050 PF00665 Integrase core domain AQ475_RS02050 PF13276 HTH-like domain AQ475_RS02055 PF13005 zinc-finger binding domain of transposase IS66 AQ475_RS02055 PF03050 Transposase IS66 family AQ475_RS02055 PF13817 IS66 C-terminal element AQ475_RS02055 PF13007 Transposase C of IS166 homeodomain AQ475_RS02060 PF05717 IS66 Orf2 like protein AQ475_RS02070 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE AQ475_RS02085 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 AQ475_RS02090 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AQ475_RS02105 PF05947 Type VI secretion system, TssF AQ475_RS02115 PF10431 C-terminal, D2-small domain, of ClpB protein AQ475_RS02115 PF00004 ATPase family associated with various cellular activities (AAA) AQ475_RS02115 PF17871 AAA lid domain AQ475_RS02115 PF07724 AAA domain (Cdc48 subfamily) AQ475_RS02125 PF04972 BON domain AQ475_RS02125 PF00691 OmpA family AQ475_RS02135 PF06761 Intracellular multiplication and human macrophage-killing AQ475_RS02135 PF14331 ImcF-related N-terminal domain AQ475_RS02135 PF06744 Type VI secretion protein IcmF C-terminal AQ475_RS02155 PF03412 Peptidase C39 family AQ475_RS02155 PF00005 ABC transporter AQ475_RS02155 PF00664 ABC transporter transmembrane region AQ475_RS02160 PF00529 HlyD membrane-fusion protein of T1SS AQ475_RS02160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AQ475_RS02175 PF11838 ERAP1-like C-terminal domain AQ475_RS02175 PF01433 Peptidase family M1 domain AQ475_RS02220 PF00012 Hsp70 protein AQ475_RS02225 PF00313 'Cold-shock' DNA-binding domain AQ475_RS02230 PF13520 Amino acid permease AQ475_RS02235 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AQ475_RS02240 PF02441 Flavoprotein AQ475_RS02245 PF00462 Glutaredoxin AQ475_RS02250 PF17827 PrmC N-terminal domain AQ475_RS02250 PF05175 Methyltransferase small domain AQ475_RS02255 PF03462 PCRF domain AQ475_RS02255 PF00472 RF-1 domain AQ475_RS02260 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AQ475_RS02260 PF01488 Shikimate / quinate 5-dehydrogenase AQ475_RS02260 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AQ475_RS02270 PF01321 Creatinase/Prolidase N-terminal domain AQ475_RS02270 PF00557 Metallopeptidase family M24 AQ475_RS02275 PF00857 Isochorismatase family AQ475_RS02285 PF00005 ABC transporter AQ475_RS02285 PF12848 ABC transporter AQ475_RS02300 PF00324 Amino acid permease AQ475_RS02305 PF06071 Protein of unknown function (DUF933) AQ475_RS02305 PF01926 50S ribosome-binding GTPase AQ475_RS02320 PF01494 FAD binding domain AQ475_RS02325 PF10411 Disulfide bond isomerase protein N-terminus AQ475_RS02325 PF13098 Thioredoxin-like domain AQ475_RS02335 PF02525 Flavodoxin-like fold AQ475_RS02340 PF03167 Uracil DNA glycosylase superfamily AQ475_RS02350 PF00218 Indole-3-glycerol phosphate synthase AQ475_RS02355 PF00591 Glycosyl transferase family, a/b domain AQ475_RS02355 PF02885 Glycosyl transferase family, helical bundle domain AQ475_RS02360 PF00117 Glutamine amidotransferase class-I AQ475_RS02365 PF04715 Anthranilate synthase component I, N terminal region AQ475_RS02365 PF00425 chorismate binding enzyme AQ475_RS02370 PF13419 Haloacid dehalogenase-like hydrolase AQ475_RS02375 PF00834 Ribulose-phosphate 3 epimerase family AQ475_RS02380 PF04379 ApaG domain AQ475_RS02385 PF03562 MltA specific insert domain AQ475_RS02385 PF06725 3D domain AQ475_RS02390 PF14535 AMP-binding enzyme C-terminal domain AQ475_RS02390 PF00501 AMP-binding enzyme AQ475_RS02395 PF03061 Thioesterase superfamily AQ475_RS02400 PF00378 Enoyl-CoA hydratase/isomerase AQ475_RS02405 PF00108 Thiolase, N-terminal domain AQ475_RS02405 PF02803 Thiolase, C-terminal domain AQ475_RS02415 PF00378 Enoyl-CoA hydratase/isomerase AQ475_RS02445 PF00384 Molybdopterin oxidoreductase AQ475_RS02445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AQ475_RS02445 PF01568 Molydopterin dinucleotide binding domain AQ475_RS02450 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS02450 PF00501 AMP-binding enzyme AQ475_RS02455 PF13609 Gram-negative porin AQ475_RS02460 PF03232 Ubiquinone biosynthesis protein COQ7 AQ475_RS02465 PF02381 MraZ protein, putative antitoxin-like AQ475_RS02470 PF01795 MraW methylase family AQ475_RS02475 PF04999 Cell division protein FtsL AQ475_RS02480 PF00905 Penicillin binding protein transpeptidase domain AQ475_RS02480 PF03717 Penicillin-binding Protein dimerisation domain AQ475_RS02485 PF08245 Mur ligase middle domain AQ475_RS02485 PF02875 Mur ligase family, glutamate ligase domain AQ475_RS02490 PF08245 Mur ligase middle domain AQ475_RS02490 PF02875 Mur ligase family, glutamate ligase domain AQ475_RS02490 PF01225 Mur ligase family, catalytic domain AQ475_RS02495 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AQ475_RS02495 PF00953 Glycosyl transferase family 4 AQ475_RS02500 PF02875 Mur ligase family, glutamate ligase domain AQ475_RS02500 PF08245 Mur ligase middle domain AQ475_RS02505 PF01098 Cell cycle protein AQ475_RS02510 PF03033 Glycosyltransferase family 28 N-terminal domain AQ475_RS02510 PF04101 Glycosyltransferase family 28 C-terminal domain AQ475_RS02515 PF08245 Mur ligase middle domain AQ475_RS02515 PF02875 Mur ligase family, glutamate ligase domain AQ475_RS02515 PF01225 Mur ligase family, catalytic domain AQ475_RS02520 PF07478 D-ala D-ala ligase C-terminus AQ475_RS02520 PF01820 D-ala D-ala ligase N-terminus AQ475_RS02525 PF08478 POTRA domain, FtsQ-type AQ475_RS02525 PF03799 Cell division protein FtsQ AQ475_RS02530 PF02491 SHS2 domain inserted in FTSA AQ475_RS02535 PF12327 FtsZ family, C-terminal domain AQ475_RS02535 PF00091 Tubulin/FtsZ family, GTPase domain AQ475_RS02540 PF08534 Redoxin AQ475_RS02545 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AQ475_RS02555 PF02810 SEC-C motif AQ475_RS02555 PF07517 SecA DEAD-like domain AQ475_RS02555 PF01043 SecA preprotein cross-linking domain AQ475_RS02555 PF07516 SecA Wing and Scaffold domain AQ475_RS02560 PF01960 ArgJ family AQ475_RS02570 PF00293 NUDIX domain AQ475_RS02575 PF03884 DNA gyrase inhibitor YacG AQ475_RS02580 PF07072 Cell division protein AQ475_RS02585 PF01121 Dephospho-CoA kinase AQ475_RS02590 PF06750 Bacterial Peptidase A24 N-terminal domain AQ475_RS02590 PF01478 Type IV leader peptidase family AQ475_RS02595 PF00482 Type II secretion system (T2SS), protein F AQ475_RS02600 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AQ475_RS02600 PF00437 Type II/IV secretion system protein AQ475_RS02605 PF00571 CBS domain AQ475_RS02605 PF01595 Cyclin M transmembrane N-terminal domain AQ475_RS02605 PF03471 Transporter associated domain AQ475_RS02615 PF00145 C-5 cytosine-specific DNA methylase AQ475_RS02640 PF06715 Gp5 C-terminal repeat (3 copies) AQ475_RS02640 PF04717 Type VI secretion system, phage-baseplate injector AQ475_RS02660 PF05717 IS66 Orf2 like protein AQ475_RS02665 PF13005 zinc-finger binding domain of transposase IS66 AQ475_RS02665 PF13007 Transposase C of IS166 homeodomain AQ475_RS02665 PF13817 IS66 C-terminal element AQ475_RS02665 PF03050 Transposase IS66 family AQ475_RS02670 PF00665 Integrase core domain AQ475_RS02670 PF13333 Integrase core domain AQ475_RS02670 PF13276 HTH-like domain AQ475_RS02675 PF01527 Transposase AQ475_RS02680 PF07929 Plasmid pRiA4b ORF-3-like protein AQ475_RS02685 PF01527 Transposase AQ475_RS02690 PF00665 Integrase core domain AQ475_RS02690 PF01527 Transposase AQ475_RS02690 PF13276 HTH-like domain AQ475_RS02725 PF00589 Phage integrase family AQ475_RS02735 PF00348 Polyprenyl synthetase AQ475_RS02745 PF00829 Ribosomal prokaryotic L21 protein AQ475_RS02750 PF01016 Ribosomal L27 protein AQ475_RS02755 PF01018 GTP1/OBG AQ475_RS02755 PF01926 50S ribosome-binding GTPase AQ475_RS02760 PF00696 Amino acid kinase family AQ475_RS02760 PF01472 PUA domain AQ475_RS02770 PF00293 NUDIX domain AQ475_RS02775 PF04073 Aminoacyl-tRNA editing domain AQ475_RS02775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ475_RS02775 PF03129 Anticodon binding domain AQ475_RS02780 PF01914 MarC family integral membrane protein AQ475_RS02785 PF00156 Phosphoribosyl transferase domain AQ475_RS02790 PF00448 SRP54-type protein, GTPase domain AQ475_RS02790 PF02978 Signal peptide binding domain AQ475_RS02790 PF02881 SRP54-type protein, helical bundle domain AQ475_RS02795 PF01578 Cytochrome C assembly protein AQ475_RS02805 PF01510 N-acetylmuramoyl-L-alanine amidase AQ475_RS02810 PF02867 Ribonucleotide reductase, barrel domain AQ475_RS02810 PF00317 Ribonucleotide reductase, all-alpha domain AQ475_RS02810 PF03477 ATP cone domain AQ475_RS02815 PF00268 Ribonucleotide reductase, small chain AQ475_RS02830 PF00294 pfkB family carbohydrate kinase AQ475_RS02835 PF08534 Redoxin AQ475_RS02850 PF02785 Biotin carboxylase C-terminal domain AQ475_RS02850 PF00289 Biotin carboxylase, N-terminal domain AQ475_RS02850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AQ475_RS02855 PF00364 Biotin-requiring enzyme AQ475_RS02860 PF01220 Dehydroquinase class II AQ475_RS02865 PF00578 AhpC/TSA family AQ475_RS02875 PF02875 Mur ligase family, glutamate ligase domain AQ475_RS02875 PF08245 Mur ligase middle domain AQ475_RS02875 PF01225 Mur ligase family, catalytic domain AQ475_RS02880 PF05728 Uncharacterised protein family (UPF0227) AQ475_RS02885 PF00773 RNB domain AQ475_RS02890 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AQ475_RS02890 PF01488 Shikimate / quinate 5-dehydrogenase AQ475_RS02890 PF08501 Shikimate dehydrogenase substrate binding domain AQ475_RS02895 PF00912 Transglycosylase AQ475_RS02910 PF01614 Bacterial transcriptional regulator AQ475_RS02910 PF09339 IclR helix-turn-helix domain AQ475_RS02915 PF05035 2-keto-3-deoxy-galactonokinase AQ475_RS02920 PF01081 KDPG and KHG aldolase AQ475_RS02930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AQ475_RS02935 PF00005 ABC transporter AQ475_RS02940 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS02955 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AQ475_RS02960 PF02464 Competence-damaged protein AQ475_RS02965 PF04608 Phosphatidylglycerophosphatase A AQ475_RS02970 PF00586 AIR synthase related protein, N-terminal domain AQ475_RS02970 PF02769 AIR synthase related protein, C-terminal domain AQ475_RS02975 PF01515 Phosphate acetyl/butaryl transferase AQ475_RS02975 PF03949 Malic enzyme, NAD binding domain AQ475_RS02975 PF00390 Malic enzyme, N-terminal domain AQ475_RS02995 PF04452 RNA methyltransferase AQ475_RS03005 PF17284 Spermidine synthase tetramerisation domain AQ475_RS03010 PF02779 Transketolase, pyrimidine binding domain AQ475_RS03010 PF02780 Transketolase, C-terminal domain AQ475_RS03010 PF00456 Transketolase, thiamine diphosphate binding domain AQ475_RS03015 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AQ475_RS03015 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AQ475_RS03020 PF07690 Major Facilitator Superfamily AQ475_RS03025 PF02560 Cyanate lyase C-terminal domain AQ475_RS03030 PF00484 Carbonic anhydrase AQ475_RS03035 PF03466 LysR substrate binding domain AQ475_RS03035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS03040 PF00392 Bacterial regulatory proteins, gntR family AQ475_RS03040 PF07729 FCD domain AQ475_RS03045 PF00375 Sodium:dicarboxylate symporter family AQ475_RS03050 PF03561 Allantoicase repeat AQ475_RS03055 PF04115 Ureidoglycolate lyase AQ475_RS03060 PF01475 Ferric uptake regulator family AQ475_RS03065 PF04355 SmpA / OmlA family AQ475_RS03070 PF01113 Dihydrodipicolinate reductase, N-terminus AQ475_RS03070 PF05173 Dihydrodipicolinate reductase, C-terminus AQ475_RS03075 PF01618 MotA/TolQ/ExbB proton channel family AQ475_RS03080 PF02472 Biopolymer transport protein ExbD/TolR AQ475_RS03085 PF08264 Anticodon-binding domain of tRNA AQ475_RS03085 PF13603 Leucyl-tRNA synthetase, Domain 2 AQ475_RS03085 PF00133 tRNA synthetases class I (I, L, M and V) AQ475_RS03085 PF09334 tRNA synthetases class I (M) AQ475_RS03090 PF04390 Lipopolysaccharide-assembly AQ475_RS03095 PF06144 DNA polymerase III, delta subunit AQ475_RS03095 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AQ475_RS03100 PF00171 Aldehyde dehydrogenase family AQ475_RS03105 PF03653 Uncharacterised protein family (UPF0093) AQ475_RS03110 PF01380 SIS domain AQ475_RS03110 PF01418 Helix-turn-helix domain, rpiR family AQ475_RS03110 PF02685 Glucokinase AQ475_RS03115 PF00920 Dehydratase family AQ475_RS03120 PF01081 KDPG and KHG aldolase AQ475_RS03125 PF02447 GntP family permease AQ475_RS03135 PF00206 Lyase AQ475_RS03135 PF08328 Adenylosuccinate lyase C-terminal AQ475_RS03140 PF07690 Major Facilitator Superfamily AQ475_RS03145 PF03466 LysR substrate binding domain AQ475_RS03145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS03150 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AQ475_RS03150 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AQ475_RS03155 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ475_RS03160 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS03165 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS03170 PF00005 ABC transporter AQ475_RS03175 PF13230 Glutamine amidotransferases class-II AQ475_RS03180 PF01979 Amidohydrolase family AQ475_RS03200 PF00572 Ribosomal protein L13 AQ475_RS03205 PF00380 Ribosomal protein S9/S16 AQ475_RS03210 PF01521 Iron-sulphur cluster biosynthesis AQ475_RS03215 PF12833 Helix-turn-helix domain AQ475_RS03215 PF02311 AraC-like ligand binding domain AQ475_RS03220 PF02798 Glutathione S-transferase, N-terminal domain AQ475_RS03225 PF00043 Glutathione S-transferase, C-terminal domain AQ475_RS03225 PF02798 Glutathione S-transferase, N-terminal domain AQ475_RS03230 PF03702 Anhydro-N-acetylmuramic acid kinase AQ475_RS03235 PF00579 tRNA synthetases class I (W and Y) AQ475_RS03235 PF01479 S4 domain AQ475_RS03240 PF02580 D-Tyr-tRNA(Tyr) deacylase AQ475_RS03245 PF00300 Histidine phosphatase superfamily (branch 1) AQ475_RS03260 PF05496 Holliday junction DNA helicase RuvB P-loop domain AQ475_RS03260 PF05491 RuvB C-terminal winged helix domain AQ475_RS03260 PF17864 RuvB AAA lid domain AQ475_RS03265 PF07499 RuvA, C-terminal domain AQ475_RS03265 PF01330 RuvA N terminal domain AQ475_RS03270 PF02075 Crossover junction endodeoxyribonuclease RuvC AQ475_RS03280 PF02142 MGS-like domain AQ475_RS03280 PF01808 AICARFT/IMPCHase bienzyme AQ475_RS03285 PF02954 Bacterial regulatory protein, Fis family AQ475_RS03290 PF01207 Dihydrouridine synthase (Dus) AQ475_RS03295 PF01494 FAD binding domain AQ475_RS03300 PF05195 Aminopeptidase P, N-terminal domain AQ475_RS03300 PF00557 Metallopeptidase family M24 AQ475_RS03305 PF13417 Glutathione S-transferase, N-terminal domain AQ475_RS03305 PF00043 Glutathione S-transferase, C-terminal domain AQ475_RS03315 PF01645 Conserved region in glutamate synthase AQ475_RS03325 PF00293 NUDIX domain AQ475_RS03330 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AQ475_RS03330 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AQ475_RS03335 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AQ475_RS03340 PF02233 NAD(P) transhydrogenase beta subunit AQ475_RS03355 PF02926 THUMP domain AQ475_RS03355 PF01170 Putative RNA methylase family UPF0020 AQ475_RS03370 PF02470 MlaD protein AQ475_RS03375 PF04403 Paraquat-inducible protein A AQ475_RS03390 PF01292 Prokaryotic cytochrome b561 AQ475_RS03395 PF04264 YceI-like domain AQ475_RS03400 PF04264 YceI-like domain AQ475_RS03405 PF07690 Major Facilitator Superfamily AQ475_RS03410 PF02355 Protein export membrane protein AQ475_RS03410 PF07549 SecD/SecF GG Motif AQ475_RS03415 PF02355 Protein export membrane protein AQ475_RS03415 PF07549 SecD/SecF GG Motif AQ475_RS03415 PF13721 SecD export protein N-terminal TM region AQ475_RS03420 PF02699 Preprotein translocase subunit AQ475_RS03425 PF01702 Queuine tRNA-ribosyltransferase AQ475_RS03430 PF02547 Queuosine biosynthesis protein AQ475_RS03435 PF00271 Helicase conserved C-terminal domain AQ475_RS03435 PF17191 RecG wedge domain AQ475_RS03435 PF00270 DEAD/DEAH box helicase AQ475_RS03440 PF03466 LysR substrate binding domain AQ475_RS03440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS03445 PF00141 Peroxidase AQ475_RS03455 PF00210 Ferritin-like domain AQ475_RS03470 PF01040 UbiA prenyltransferase family AQ475_RS03475 PF14748 Pyrroline-5-carboxylate reductase dimerisation AQ475_RS03475 PF03807 NADP oxidoreductase coenzyme F420-dependent AQ475_RS03480 PF01168 Alanine racemase, N-terminal domain AQ475_RS03485 PF13183 4Fe-4S dicluster domain AQ475_RS03485 PF02754 Cysteine-rich domain AQ475_RS03490 PF01565 FAD binding domain AQ475_RS03495 PF01565 FAD binding domain AQ475_RS03495 PF02913 FAD linked oxidases, C-terminal domain AQ475_RS03500 PF01565 FAD binding domain AQ475_RS03500 PF02913 FAD linked oxidases, C-terminal domain AQ475_RS03505 PF01923 Cobalamin adenosyltransferase AQ475_RS03510 PF00970 Oxidoreductase FAD-binding domain AQ475_RS03510 PF00042 Globin AQ475_RS03510 PF00175 Oxidoreductase NAD-binding domain AQ475_RS03515 PF00793 DAHP synthetase I family AQ475_RS03520 PF01523 Putative modulator of DNA gyrase AQ475_RS03525 PF00795 Carbon-nitrogen hydrolase AQ475_RS03530 PF13502 AsmA-like C-terminal region AQ475_RS03530 PF13116 Protein of unknown function AQ475_RS03535 PF08335 GlnD PII-uridylyltransferase AQ475_RS03535 PF03710 Glutamate-ammonia ligase adenylyltransferase AQ475_RS03540 PF02463 RecF/RecN/SMC N terminal domain AQ475_RS03545 PF01513 ATP-NAD kinase AQ475_RS03550 PF01628 HrcA protein C terminal domain AQ475_RS03550 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AQ475_RS03555 PF00762 Ferrochelatase AQ475_RS03560 PF01479 S4 domain AQ475_RS03565 PF01025 GrpE AQ475_RS03575 PF00012 Hsp70 protein AQ475_RS03580 PF00684 DnaJ central domain AQ475_RS03580 PF00226 DnaJ domain AQ475_RS03580 PF01556 DnaJ C terminal domain AQ475_RS03585 PF00425 chorismate binding enzyme AQ475_RS03585 PF04715 Anthranilate synthase component I, N terminal region AQ475_RS03590 PF02548 Ketopantoate hydroxymethyltransferase AQ475_RS03595 PF01712 Deoxynucleoside kinase AQ475_RS03600 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AQ475_RS03605 PF12627 Probable RNA and SrmB- binding site of polymerase A AQ475_RS03605 PF12626 Polymerase A arginine-rich C-terminus AQ475_RS03605 PF01743 Poly A polymerase head domain AQ475_RS03615 PF00308 Bacterial dnaA protein AQ475_RS03625 PF02769 AIR synthase related protein, C-terminal domain AQ475_RS03625 PF00586 AIR synthase related protein, N-terminal domain AQ475_RS03640 PF08676 MutL C terminal dimerisation domain AQ475_RS03640 PF01119 DNA mismatch repair protein, C-terminal domain AQ475_RS03645 PF09335 SNARE associated Golgi protein AQ475_RS03650 PF05552 Conserved TM helix AQ475_RS03650 PF00924 Mechanosensitive ion channel AQ475_RS03660 PF01050 Mannose-6-phosphate isomerase AQ475_RS03660 PF00483 Nucleotidyl transferase AQ475_RS03665 PF05159 Capsule polysaccharide biosynthesis protein AQ475_RS03670 PF13439 Glycosyltransferase Family 4 AQ475_RS03670 PF00534 Glycosyl transferases group 1 AQ475_RS03675 PF02563 Polysaccharide biosynthesis/export protein AQ475_RS03695 PF16363 GDP-mannose 4,6 dehydratase AQ475_RS03700 PF16363 GDP-mannose 4,6 dehydratase AQ475_RS03705 PF00534 Glycosyl transferases group 1 AQ475_RS03715 PF00005 ABC transporter AQ475_RS03720 PF01061 ABC-2 type transporter AQ475_RS03730 PF05159 Capsule polysaccharide biosynthesis protein AQ475_RS03735 PF00106 short chain dehydrogenase AQ475_RS03740 PF00884 Sulfatase AQ475_RS03745 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ475_RS03745 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ475_RS03745 PF08659 KR domain AQ475_RS03745 PF14765 Polyketide synthase dehydratase AQ475_RS03745 PF00550 Phosphopantetheine attachment site AQ475_RS03745 PF16197 Ketoacyl-synthetase C-terminal extension AQ475_RS03745 PF08240 Alcohol dehydrogenase GroES-like domain AQ475_RS03745 PF00698 Acyl transferase domain AQ475_RS03750 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AQ475_RS03755 PF00155 Aminotransferase class I and II AQ475_RS03790 PF12833 Helix-turn-helix domain AQ475_RS03790 PF02311 AraC-like ligand binding domain AQ475_RS03795 PF02397 Bacterial sugar transferase AQ475_RS03800 PF10531 SLBB domain AQ475_RS03800 PF02563 Polysaccharide biosynthesis/export protein AQ475_RS03805 PF01451 Low molecular weight phosphotyrosine protein phosphatase AQ475_RS03810 PF13614 AAA domain AQ475_RS03810 PF02706 Chain length determinant protein AQ475_RS03810 PF13807 G-rich domain on putative tyrosine kinase AQ475_RS03820 PF05159 Capsule polysaccharide biosynthesis protein AQ475_RS03825 PF00132 Bacterial transferase hexapeptide (six repeats) AQ475_RS03835 PF13439 Glycosyltransferase Family 4 AQ475_RS03835 PF00534 Glycosyl transferases group 1 AQ475_RS03840 PF00793 DAHP synthetase I family AQ475_RS03850 PF01380 SIS domain AQ475_RS03850 PF00571 CBS domain AQ475_RS03855 PF00483 Nucleotidyl transferase AQ475_RS03865 PF05247 Flagellar transcriptional activator (FlhD) AQ475_RS03880 PF00266 Aminotransferase class-V AQ475_RS03885 PF00892 EamA-like transporter family AQ475_RS03900 PF00691 OmpA family AQ475_RS03905 PF04052 TolB amino-terminal domain AQ475_RS03905 PF07676 WD40-like Beta Propeller Repeat AQ475_RS03915 PF02472 Biopolymer transport protein ExbD/TolR AQ475_RS03920 PF01618 MotA/TolQ/ExbB proton channel family AQ475_RS03925 PF03061 Thioesterase superfamily AQ475_RS03930 PF00106 short chain dehydrogenase AQ475_RS03935 PF00464 Serine hydroxymethyltransferase AQ475_RS03940 PF03477 ATP cone domain AQ475_RS03965 PF00114 Pilin (bacterial filament) AQ475_RS03965 PF07963 Prokaryotic N-terminal methylation motif AQ475_RS03985 PF10417 C-terminal domain of 1-Cys peroxiredoxin AQ475_RS03985 PF00578 AhpC/TSA family AQ475_RS03990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ475_RS03990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS03990 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS04015 PF01494 FAD binding domain AQ475_RS04025 PF07690 Major Facilitator Superfamily AQ475_RS04030 PF04209 homogentisate 1,2-dioxygenase AQ475_RS04045 PF07690 Major Facilitator Superfamily AQ475_RS04050 PF00881 Nitroreductase family AQ475_RS04055 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ475_RS04055 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AQ475_RS04060 PF03466 LysR substrate binding domain AQ475_RS04060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS04065 PF00266 Aminotransferase class-V AQ475_RS04075 PF00892 EamA-like transporter family AQ475_RS04080 PF07690 Major Facilitator Superfamily AQ475_RS04085 PF00111 2Fe-2S iron-sulfur cluster binding domain AQ475_RS04085 PF01799 [2Fe-2S] binding domain AQ475_RS04090 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AQ475_RS04090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AQ475_RS04105 PF07715 TonB-dependent Receptor Plug Domain AQ475_RS04105 PF00593 TonB dependent receptor AQ475_RS04110 PF00005 ABC transporter AQ475_RS04120 PF01032 FecCD transport family AQ475_RS04125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS04125 PF03466 LysR substrate binding domain AQ475_RS04150 PF10605 3HB-oligomer hydrolase (3HBOH) AQ475_RS04160 PF01925 Sulfite exporter TauE/SafE AQ475_RS04165 PF07690 Major Facilitator Superfamily AQ475_RS04170 PF03009 Glycerophosphoryl diester phosphodiesterase family AQ475_RS04175 PF01810 LysE type translocator AQ475_RS04225 PF08240 Alcohol dehydrogenase GroES-like domain AQ475_RS04225 PF00107 Zinc-binding dehydrogenase AQ475_RS04230 PF01638 HxlR-like helix-turn-helix AQ475_RS04240 PF00166 Chaperonin 10 Kd subunit AQ475_RS04245 PF00118 TCP-1/cpn60 chaperonin family AQ475_RS04255 PF00301 Rubredoxin AQ475_RS04265 PF02622 Uncharacterized ACR, COG1678 AQ475_RS04270 PF03652 Holliday junction resolvase AQ475_RS04275 PF00156 Phosphoribosyl transferase domain AQ475_RS04280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AQ475_RS04280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AQ475_RS04285 PF01979 Amidohydrolase family AQ475_RS04295 PF00149 Calcineurin-like phosphoesterase AQ475_RS04300 PF16363 GDP-mannose 4,6 dehydratase AQ475_RS04305 PF00483 Nucleotidyl transferase AQ475_RS04310 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AQ475_RS04315 PF04321 RmlD substrate binding domain AQ475_RS04325 PF00005 ABC transporter AQ475_RS04335 PF01370 NAD dependent epimerase/dehydratase family AQ475_RS04350 PF00535 Glycosyl transferase family 2 AQ475_RS04360 PF01370 NAD dependent epimerase/dehydratase family AQ475_RS04365 PF00953 Glycosyl transferase family 4 AQ475_RS04370 PF02719 Polysaccharide biosynthesis protein AQ475_RS04380 PF16363 GDP-mannose 4,6 dehydratase AQ475_RS04385 PF00534 Glycosyl transferases group 1 AQ475_RS04385 PF13439 Glycosyltransferase Family 4 AQ475_RS04405 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AQ475_RS04415 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AQ475_RS04415 PF00534 Glycosyl transferases group 1 AQ475_RS04420 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ475_RS04425 PF01730 UreF AQ475_RS04430 PF05194 UreE urease accessory protein, C-terminal domain AQ475_RS04430 PF02814 UreE urease accessory protein, N-terminal domain AQ475_RS04435 PF00449 Urease alpha-subunit, N-terminal domain AQ475_RS04435 PF01979 Amidohydrolase family AQ475_RS04440 PF00699 Urease beta subunit AQ475_RS04445 PF00547 Urease, gamma subunit AQ475_RS04450 PF01774 UreD urease accessory protein AQ475_RS04455 PF00005 ABC transporter AQ475_RS04460 PF00005 ABC transporter AQ475_RS04470 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS04485 PF00202 Aminotransferase class-III AQ475_RS04490 PF00581 Rhodanese-like domain AQ475_RS04505 PF04055 Radical SAM superfamily AQ475_RS04505 PF06969 HemN C-terminal domain AQ475_RS04510 PF03692 Putative zinc- or iron-chelating domain AQ475_RS04520 PF02673 Bacitracin resistance protein BacA AQ475_RS04525 PF02390 Putative methyltransferase AQ475_RS04545 PF13276 HTH-like domain AQ475_RS04545 PF13683 Integrase core domain AQ475_RS04550 PF01527 Transposase AQ475_RS04560 PF00107 Zinc-binding dehydrogenase AQ475_RS04560 PF08240 Alcohol dehydrogenase GroES-like domain AQ475_RS04565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS04565 PF03466 LysR substrate binding domain AQ475_RS04570 PF02146 Sir2 family AQ475_RS04575 PF09286 Pro-kumamolisin, activation domain AQ475_RS04575 PF00082 Subtilase family AQ475_RS04580 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AQ475_RS04590 PF02325 YGGT family AQ475_RS04610 PF00291 Pyridoxal-phosphate dependent enzyme AQ475_RS04620 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AQ475_RS04625 PF01464 Transglycosylase SLT domain AQ475_RS04630 PF00155 Aminotransferase class I and II AQ475_RS04635 PF01029 NusB family AQ475_RS04640 PF00885 6,7-dimethyl-8-ribityllumazine synthase AQ475_RS04645 PF00925 GTP cyclohydrolase II AQ475_RS04645 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AQ475_RS04650 PF00677 Lumazine binding domain AQ475_RS04655 PF01872 RibD C-terminal domain AQ475_RS04655 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AQ475_RS04660 PF00202 Aminotransferase class-III AQ475_RS04675 PF07690 Major Facilitator Superfamily AQ475_RS04680 PF00005 ABC transporter AQ475_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS04690 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ475_RS04700 PF01418 Helix-turn-helix domain, rpiR family AQ475_RS04700 PF02685 Glucokinase AQ475_RS04700 PF01380 SIS domain AQ475_RS04705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AQ475_RS04710 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AQ475_RS04710 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AQ475_RS04715 PF01547 Bacterial extracellular solute-binding protein AQ475_RS04720 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS04725 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS04730 PF00005 ABC transporter AQ475_RS04730 PF17912 MalK OB fold domain AQ475_RS04735 PF03458 UPF0126 domain AQ475_RS04740 PF00488 MutS domain V AQ475_RS04740 PF01713 Smr domain AQ475_RS04745 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ475_RS04750 PF17854 FtsK alpha domain AQ475_RS04750 PF01580 FtsK/SpoIIIE family AQ475_RS04750 PF09397 Ftsk gamma domain AQ475_RS04750 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AQ475_RS04755 PF03548 Outer membrane lipoprotein carrier protein LolA AQ475_RS04760 PF12002 MgsA AAA+ ATPase C terminal AQ475_RS04760 PF16193 AAA C-terminal domain AQ475_RS04760 PF00004 ATPase family associated with various cellular activities (AAA) AQ475_RS04770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ475_RS04770 PF02403 Seryl-tRNA synthetase N-terminal domain AQ475_RS04790 PF03775 Septum formation inhibitor MinC, C-terminal domain AQ475_RS04790 PF05209 Septum formation inhibitor MinC, N-terminal domain AQ475_RS04795 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AQ475_RS04800 PF03776 Septum formation topological specificity factor MinE AQ475_RS04810 PF00654 Voltage gated chloride channel AQ475_RS04815 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AQ475_RS04825 PF07690 Major Facilitator Superfamily AQ475_RS04825 PF00083 Sugar (and other) transporter AQ475_RS04855 PF00872 Transposase, Mutator family AQ475_RS04875 PF04055 Radical SAM superfamily AQ475_RS04875 PF06969 HemN C-terminal domain AQ475_RS04880 PF01725 Ham1 family AQ475_RS04885 PF01138 3' exoribonuclease family, domain 1 AQ475_RS04885 PF03725 3' exoribonuclease family, domain 2 AQ475_RS04890 PF03755 YicC-like family, N-terminal region AQ475_RS04890 PF08340 Domain of unknown function (DUF1732) AQ475_RS04895 PF00625 Guanylate kinase AQ475_RS04900 PF01192 RNA polymerase Rpb6 AQ475_RS04905 PF02824 TGS domain AQ475_RS04905 PF04607 Region found in RelA / SpoT proteins AQ475_RS04905 PF13291 ACT domain AQ475_RS04920 PF01272 Transcription elongation factor, GreA/GreB, C-term AQ475_RS04920 PF03449 Transcription elongation factor, N-terminal AQ475_RS04925 PF13609 Gram-negative porin AQ475_RS04935 PF00313 'Cold-shock' DNA-binding domain AQ475_RS04940 PF11490 DNA polymerase III polC-type N-terminus II AQ475_RS04940 PF14480 DNA polymerase III polC-type N-terminus I AQ475_RS04940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AQ475_RS04940 PF14579 Helix-hairpin-helix motif AQ475_RS04940 PF02811 PHP domain AQ475_RS04940 PF07733 Bacterial DNA polymerase III alpha NTPase domain AQ475_RS04940 PF00929 Exonuclease AQ475_RS04955 PF07715 TonB-dependent Receptor Plug Domain AQ475_RS04955 PF00593 TonB dependent receptor AQ475_RS04985 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AQ475_RS04990 PF03466 LysR substrate binding domain AQ475_RS04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS04995 PF01717 Cobalamin-independent synthase, Catalytic domain AQ475_RS04995 PF08267 Cobalamin-independent synthase, N-terminal domain AQ475_RS05005 PF01433 Peptidase family M1 domain AQ475_RS05005 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AQ475_RS05005 PF11940 Domain of unknown function (DUF3458) Ig-like fold AQ475_RS05015 PF01169 Uncharacterized protein family UPF0016 AQ475_RS05020 PF01979 Amidohydrolase family AQ475_RS05025 PF00860 Permease family AQ475_RS05030 PF00962 Adenosine/AMP deaminase AQ475_RS05040 PF02600 Disulfide bond formation protein DsbB AQ475_RS05045 PF01425 Amidase AQ475_RS05055 PF07722 Peptidase C26 AQ475_RS05060 PF07690 Major Facilitator Superfamily AQ475_RS05075 PF01494 FAD binding domain AQ475_RS05085 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AQ475_RS05085 PF12838 4Fe-4S dicluster domain AQ475_RS05085 PF01568 Molydopterin dinucleotide binding domain AQ475_RS05085 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AQ475_RS05085 PF00384 Molybdopterin oxidoreductase AQ475_RS05090 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AQ475_RS05090 PF00037 4Fe-4S binding domain AQ475_RS05090 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AQ475_RS05100 PF12727 PBP superfamily domain AQ475_RS05100 PF12728 Helix-turn-helix domain AQ475_RS05110 PF00398 Ribosomal RNA adenine dimethylase AQ475_RS05130 PF01032 FecCD transport family AQ475_RS05180 PF13356 Arm DNA-binding domain AQ475_RS05180 PF00589 Phage integrase family AQ475_RS05190 PF13419 Haloacid dehalogenase-like hydrolase AQ475_RS05200 PF00691 OmpA family AQ475_RS05205 PF00521 DNA gyrase/topoisomerase IV, subunit A AQ475_RS05205 PF03989 DNA gyrase C-terminal domain, beta-propeller AQ475_RS05215 PF00266 Aminotransferase class-V AQ475_RS05220 PF01817 Chorismate mutase type II AQ475_RS05220 PF01842 ACT domain AQ475_RS05220 PF00800 Prephenate dehydratase AQ475_RS05225 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AQ475_RS05230 PF02224 Cytidylate kinase AQ475_RS05235 PF00575 S1 RNA binding domain AQ475_RS05240 PF00216 Bacterial DNA-binding protein AQ475_RS05250 PF18073 Rubredoxin metal binding domain AQ475_RS05255 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AQ475_RS05255 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AQ475_RS05255 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AQ475_RS05260 PF00294 pfkB family carbohydrate kinase AQ475_RS05265 PF01370 NAD dependent epimerase/dehydratase family AQ475_RS05280 PF00291 Pyridoxal-phosphate dependent enzyme AQ475_RS05285 PF13406 Transglycosylase SLT domain AQ475_RS05290 PF00850 Histone deacetylase domain AQ475_RS05295 PF12146 Serine aminopeptidase, S33 AQ475_RS05300 PF09383 NIL domain AQ475_RS05300 PF00005 ABC transporter AQ475_RS05305 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS05310 PF03180 NLPA lipoprotein AQ475_RS05315 PF01012 Electron transfer flavoprotein domain AQ475_RS05320 PF01012 Electron transfer flavoprotein domain AQ475_RS05320 PF00766 Electron transfer flavoprotein FAD-binding domain AQ475_RS05325 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS05325 PF12806 Acetyl-CoA dehydrogenase C-terminal like AQ475_RS05325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ475_RS05325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS05330 PF01266 FAD dependent oxidoreductase AQ475_RS05335 PF01037 Lrp/AsnC ligand binding domain AQ475_RS05350 PF07995 Glucose / Sorbosone dehydrogenase AQ475_RS05355 PF00886 Ribosomal protein S16 AQ475_RS05360 PF01782 RimM N-terminal domain AQ475_RS05360 PF05239 PRC-barrel domain AQ475_RS05365 PF01746 tRNA (Guanine-1)-methyltransferase AQ475_RS05370 PF01245 Ribosomal protein L19 AQ475_RS05380 PF00293 NUDIX domain AQ475_RS05385 PF17113 Regulatory signalling modulator protein AmpE AQ475_RS05385 PF03186 CobD/Cbib protein AQ475_RS05395 PF03193 RsgA GTPase AQ475_RS05400 PF01435 Peptidase family M48 AQ475_RS05405 PF00929 Exonuclease AQ475_RS05410 PF00994 Probable molybdopterin binding domain AQ475_RS05415 PF04751 Protein of unknown function (DUF615) AQ475_RS05420 PF01523 Putative modulator of DNA gyrase AQ475_RS05425 PF00186 Dihydrofolate reductase AQ475_RS05435 PF02954 Bacterial regulatory protein, Fis family AQ475_RS05435 PF00158 Sigma-54 interaction domain AQ475_RS05435 PF00072 Response regulator receiver domain AQ475_RS05450 PF00158 Sigma-54 interaction domain AQ475_RS05450 PF00072 Response regulator receiver domain AQ475_RS05450 PF02954 Bacterial regulatory protein, Fis family AQ475_RS05455 PF00303 Thymidylate synthase AQ475_RS05475 PF03061 Thioesterase superfamily AQ475_RS05485 PF10415 Fumarase C C-terminus AQ475_RS05485 PF00206 Lyase AQ475_RS05490 PF01554 MatE AQ475_RS05515 PF03591 AzlC protein AQ475_RS05525 PF12833 Helix-turn-helix domain AQ475_RS05525 PF02311 AraC-like ligand binding domain AQ475_RS05530 PF05981 CreA protein AQ475_RS05545 PF00037 4Fe-4S binding domain AQ475_RS05545 PF11953 Domain of unknown function (DUF3470) AQ475_RS05550 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AQ475_RS05550 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AQ475_RS05565 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AQ475_RS05565 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ475_RS05570 PF02646 RmuC family AQ475_RS05585 PF03454 MoeA C-terminal region (domain IV) AQ475_RS05585 PF03453 MoeA N-terminal region (domain I and II) AQ475_RS05585 PF00994 Probable molybdopterin binding domain AQ475_RS05590 PF12804 MobA-like NTP transferase domain AQ475_RS05595 PF04055 Radical SAM superfamily AQ475_RS05595 PF06463 Molybdenum Cofactor Synthesis C AQ475_RS05600 PF00575 S1 RNA binding domain AQ475_RS05600 PF10150 Ribonuclease E/G family AQ475_RS05600 PF12111 Polyribonucleotide phosphorylase C terminal AQ475_RS05605 PF01479 S4 domain AQ475_RS05605 PF00849 RNA pseudouridylate synthase AQ475_RS05610 PF13419 Haloacid dehalogenase-like hydrolase AQ475_RS05620 PF01343 Peptidase family S49 AQ475_RS05625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ475_RS05630 PF02545 Maf-like protein AQ475_RS05635 PF02620 Large ribosomal RNA subunit accumulation protein YceD AQ475_RS05640 PF01783 Ribosomal L32p protein family AQ475_RS05645 PF02504 Fatty acid synthesis protein AQ475_RS05650 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AQ475_RS05650 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AQ475_RS05655 PF00698 Acyl transferase domain AQ475_RS05665 PF00550 Phosphopantetheine attachment site AQ475_RS05670 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ475_RS05670 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ475_RS05680 PF04542 Sigma-70 region 2 AQ475_RS05680 PF08281 Sigma-70, region 4 AQ475_RS05690 PF03888 MucB/RseB N-terminal domain AQ475_RS05690 PF17188 MucB/RseB C-terminal domain AQ475_RS05695 PF13180 PDZ domain AQ475_RS05705 PF03144 Elongation factor Tu domain 2 AQ475_RS05705 PF06421 GTP-binding protein LepA C-terminus AQ475_RS05705 PF00009 Elongation factor Tu GTP binding domain AQ475_RS05705 PF00679 Elongation factor G C-terminus AQ475_RS05710 PF10502 Signal peptidase, peptidase S26 AQ475_RS05715 PF00035 Double-stranded RNA binding motif AQ475_RS05715 PF14622 Ribonuclease-III-like AQ475_RS05720 PF01926 50S ribosome-binding GTPase AQ475_RS05720 PF07650 KH domain AQ475_RS05725 PF02565 Recombination protein O C terminal AQ475_RS05725 PF11967 Recombination protein O N terminal AQ475_RS05730 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AQ475_RS05735 PF01648 4'-phosphopantetheinyl transferase superfamily AQ475_RS05740 PF00933 Glycosyl hydrolase family 3 N terminal domain AQ475_RS05745 PF02954 Bacterial regulatory protein, Fis family AQ475_RS05745 PF00072 Response regulator receiver domain AQ475_RS05745 PF00158 Sigma-54 interaction domain AQ475_RS05750 PF09285 Elongation factor P, C-terminal AQ475_RS05750 PF08207 Elongation factor P (EF-P) KOW-like domain AQ475_RS05750 PF01132 Elongation factor P (EF-P) OB domain AQ475_RS05760 PF01541 GIY-YIG catalytic domain AQ475_RS05760 PF08459 UvrC Helix-hairpin-helix N-terminal AQ475_RS05760 PF02151 UvrB/uvrC motif AQ475_RS05765 PF01066 CDP-alcohol phosphatidyltransferase AQ475_RS05785 PF13185 GAF domain AQ475_RS05790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS05790 PF03466 LysR substrate binding domain AQ475_RS05795 PF05726 Pirin C-terminal cupin domain AQ475_RS05795 PF02678 Pirin AQ475_RS05800 PF13673 Acetyltransferase (GNAT) domain AQ475_RS05815 PF02630 SCO1/SenC AQ475_RS05820 PF02358 Trehalose-phosphatase AQ475_RS05825 PF00982 Glycosyltransferase family 20 AQ475_RS05830 PF00664 ABC transporter transmembrane region AQ475_RS05830 PF00005 ABC transporter AQ475_RS05835 PF00534 Glycosyl transferases group 1 AQ475_RS05835 PF13439 Glycosyltransferase Family 4 AQ475_RS05850 PF01266 FAD dependent oxidoreductase AQ475_RS05855 PF13458 Periplasmic binding protein AQ475_RS05860 PF05506 Domain of unknown function (DUF756) AQ475_RS05860 PF04185 Phosphoesterase family AQ475_RS05865 PF08543 Phosphomethylpyrimidine kinase AQ475_RS05870 PF00561 alpha/beta hydrolase fold AQ475_RS05875 PF00296 Luciferase-like monooxygenase AQ475_RS05890 PF04794 YdjC-like protein AQ475_RS05905 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS05910 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS05915 PF00005 ABC transporter AQ475_RS05920 PF12833 Helix-turn-helix domain AQ475_RS05925 PF00202 Aminotransferase class-III AQ475_RS05930 PF04958 Arginine N-succinyltransferase beta subunit AQ475_RS05935 PF04958 Arginine N-succinyltransferase beta subunit AQ475_RS05940 PF00171 Aldehyde dehydrogenase family AQ475_RS05945 PF04996 Succinylarginine dihydrolase AQ475_RS05950 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AQ475_RS05955 PF02798 Glutathione S-transferase, N-terminal domain AQ475_RS05955 PF00043 Glutathione S-transferase, C-terminal domain AQ475_RS05965 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ475_RS05975 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AQ475_RS05980 PF00510 Cytochrome c oxidase subunit III AQ475_RS05985 PF00115 Cytochrome C and Quinol oxidase polypeptide I AQ475_RS05990 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AQ475_RS05990 PF06481 COX Aromatic Rich Motif AQ475_RS06000 PF02082 Transcriptional regulator AQ475_RS06010 PF01883 Iron-sulfur cluster assembly protein AQ475_RS06015 PF01592 NifU-like N terminal domain AQ475_RS06020 PF00266 Aminotransferase class-V AQ475_RS06030 PF00005 ABC transporter AQ475_RS06035 PF01458 Uncharacterized protein family (UPF0051) AQ475_RS06045 PF02203 Tar ligand binding domain homologue AQ475_RS06045 PF00672 HAMP domain AQ475_RS06045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ475_RS06050 PF04055 Radical SAM superfamily AQ475_RS06050 PF06969 HemN C-terminal domain AQ475_RS06055 PF00027 Cyclic nucleotide-binding domain AQ475_RS06055 PF00520 Ion transport protein AQ475_RS06070 PF01136 Peptidase family U32 AQ475_RS06075 PF01136 Peptidase family U32 AQ475_RS06080 PF02036 SCP-2 sterol transfer family AQ475_RS06085 PF08859 DGC domain AQ475_RS06115 PF01883 Iron-sulfur cluster assembly protein AQ475_RS06120 PF00115 Cytochrome C and Quinol oxidase polypeptide I AQ475_RS06125 PF00487 Fatty acid desaturase AQ475_RS06130 PF00875 DNA photolyase AQ475_RS06130 PF03441 FAD binding domain of DNA photolyase AQ475_RS06145 PF00196 Bacterial regulatory proteins, luxR family AQ475_RS06145 PF03472 Autoinducer binding domain AQ475_RS06165 PF00221 Aromatic amino acid lyase AQ475_RS06170 PF00392 Bacterial regulatory proteins, gntR family AQ475_RS06170 PF07702 UTRA domain AQ475_RS06175 PF17391 Urocanase N-terminal domain AQ475_RS06175 PF01175 Urocanase Rossmann-like domain AQ475_RS06175 PF17392 Urocanase C-terminal domain AQ475_RS06185 PF01979 Amidohydrolase family AQ475_RS06190 PF01979 Amidohydrolase family AQ475_RS06205 PF07722 Peptidase C26 AQ475_RS06210 PF00120 Glutamine synthetase, catalytic domain AQ475_RS06215 PF00202 Aminotransferase class-III AQ475_RS06275 PF00589 Phage integrase family AQ475_RS06275 PF13356 Arm DNA-binding domain AQ475_RS06285 PF03466 LysR substrate binding domain AQ475_RS06285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS06290 PF18158 Adaptive response protein AidB N-terminal domain AQ475_RS06290 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS06290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS06295 PF02515 CoA-transferase family III AQ475_RS06300 PF07690 Major Facilitator Superfamily AQ475_RS06300 PF00083 Sugar (and other) transporter AQ475_RS06305 PF04362 Bacterial Fe(2+) trafficking AQ475_RS06310 PF00696 Amino acid kinase family AQ475_RS06310 PF00583 Acetyltransferase (GNAT) family AQ475_RS06315 PF11898 Domain of unknown function (DUF3418) AQ475_RS06315 PF00270 DEAD/DEAH box helicase AQ475_RS06315 PF04408 Helicase associated domain (HA2) AQ475_RS06315 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AQ475_RS06315 PF00271 Helicase conserved C-terminal domain AQ475_RS06335 PF00994 Probable molybdopterin binding domain AQ475_RS06335 PF02464 Competence-damaged protein AQ475_RS06335 PF18146 Damage-inducible protein CinA KH domain AQ475_RS06345 PF00120 Glutamine synthetase, catalytic domain AQ475_RS06345 PF03951 Glutamine synthetase, beta-Grasp domain AQ475_RS06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS06350 PF00989 PAS fold AQ475_RS06350 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS06355 PF02954 Bacterial regulatory protein, Fis family AQ475_RS06355 PF00072 Response regulator receiver domain AQ475_RS06355 PF00158 Sigma-54 interaction domain AQ475_RS06380 PF00196 Bacterial regulatory proteins, luxR family AQ475_RS06380 PF00072 Response regulator receiver domain AQ475_RS06385 PF07730 Histidine kinase AQ475_RS06390 PF02665 Nitrate reductase gamma subunit AQ475_RS06395 PF02613 Nitrate reductase delta subunit AQ475_RS06400 PF14711 Respiratory nitrate reductase beta C-terminal AQ475_RS06400 PF13247 4Fe-4S dicluster domain AQ475_RS06405 PF00384 Molybdopterin oxidoreductase AQ475_RS06405 PF14710 Respiratory nitrate reductase alpha N-terminal AQ475_RS06405 PF01568 Molydopterin dinucleotide binding domain AQ475_RS06410 PF07690 Major Facilitator Superfamily AQ475_RS06415 PF07690 Major Facilitator Superfamily AQ475_RS06425 PF01757 Acyltransferase family AQ475_RS06430 PF00817 impB/mucB/samB family AQ475_RS06430 PF11799 impB/mucB/samB family C-terminal domain AQ475_RS06435 PF01432 Peptidase family M3 AQ475_RS06440 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AQ475_RS06440 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AQ475_RS06445 PF00196 Bacterial regulatory proteins, luxR family AQ475_RS06445 PF00072 Response regulator receiver domain AQ475_RS06450 PF00989 PAS fold AQ475_RS06450 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS06450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS06455 PF00456 Transketolase, thiamine diphosphate binding domain AQ475_RS06455 PF17831 Pyruvate dehydrogenase E1 component middle domain AQ475_RS06460 PF00364 Biotin-requiring enzyme AQ475_RS06460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AQ475_RS06460 PF02817 e3 binding domain AQ475_RS06465 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ475_RS06465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ475_RS06470 PF09361 Phasin protein AQ475_RS06475 PF00768 D-alanyl-D-alanine carboxypeptidase AQ475_RS06480 PF01614 Bacterial transcriptional regulator AQ475_RS06480 PF09339 IclR helix-turn-helix domain AQ475_RS06485 PF02754 Cysteine-rich domain AQ475_RS06490 PF13183 4Fe-4S dicluster domain AQ475_RS06490 PF11870 Domain of unknown function (DUF3390) AQ475_RS06490 PF02589 LUD domain AQ475_RS06500 PF01451 Low molecular weight phosphotyrosine protein phosphatase AQ475_RS06505 PF02082 Transcriptional regulator AQ475_RS06510 PF00266 Aminotransferase class-V AQ475_RS06515 PF01592 NifU-like N terminal domain AQ475_RS06520 PF01521 Iron-sulphur cluster biosynthesis AQ475_RS06525 PF07743 HSCB C-terminal oligomerisation domain AQ475_RS06530 PF00012 Hsp70 protein AQ475_RS06535 PF00111 2Fe-2S iron-sulfur cluster binding domain AQ475_RS06540 PF04384 Iron-sulphur cluster assembly AQ475_RS06550 PF00152 tRNA synthetases class II (D, K and N) AQ475_RS06550 PF01336 OB-fold nucleic acid binding domain AQ475_RS06555 PF00472 RF-1 domain AQ475_RS06555 PF03462 PCRF domain AQ475_RS06565 PF00472 RF-1 domain AQ475_RS06565 PF03462 PCRF domain AQ475_RS06570 PF17768 RecJ OB domain AQ475_RS06570 PF01368 DHH family AQ475_RS06570 PF02272 DHHA1 domain AQ475_RS06580 PF02687 FtsX-like permease family AQ475_RS06580 PF12704 MacB-like periplasmic core domain AQ475_RS06585 PF00005 ABC transporter AQ475_RS06590 PF01026 TatD related DNase AQ475_RS06595 PF00753 Metallo-beta-lactamase superfamily AQ475_RS06595 PF03772 Competence protein AQ475_RS06600 PF08386 TAP-like protein AQ475_RS06600 PF00561 alpha/beta hydrolase fold AQ475_RS06610 PF06418 CTP synthase N-terminus AQ475_RS06610 PF00117 Glutamine amidotransferase class-I AQ475_RS06615 PF00793 DAHP synthetase I family AQ475_RS06620 PF00113 Enolase, C-terminal TIM barrel domain AQ475_RS06620 PF03952 Enolase, N-terminal domain AQ475_RS06625 PF04977 Septum formation initiator AQ475_RS06635 PF01430 Hsp33 protein AQ475_RS06640 PF00132 Bacterial transferase hexapeptide (six repeats) AQ475_RS06645 PF04305 Protein of unknown function (DUF455) AQ475_RS06650 PF00561 alpha/beta hydrolase fold AQ475_RS06655 PF02811 PHP domain AQ475_RS06660 PF01300 Telomere recombination AQ475_RS06665 PF02163 Peptidase family M50 AQ475_RS06670 PF00579 tRNA synthetases class I (W and Y) AQ475_RS06680 PF00701 Dihydrodipicolinate synthetase family AQ475_RS06685 PF06804 NlpB/DapX lipoprotein AQ475_RS06690 PF10996 Beta-Casp domain AQ475_RS06690 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AQ475_RS06690 PF00753 Metallo-beta-lactamase superfamily AQ475_RS06695 PF08007 Cupin superfamily protein AQ475_RS06700 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AQ475_RS06720 PF00459 Inositol monophosphatase family AQ475_RS06725 PF00588 SpoU rRNA Methylase family AQ475_RS06730 PF00132 Bacterial transferase hexapeptide (six repeats) AQ475_RS06740 PF00149 Calcineurin-like phosphoesterase AQ475_RS06745 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AQ475_RS06750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AQ475_RS06760 PF01406 tRNA synthetases class I (C) catalytic domain AQ475_RS06760 PF09190 DALR domain AQ475_RS06770 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AQ475_RS06775 PF01171 PP-loop family AQ475_RS06775 PF09179 TilS substrate binding domain AQ475_RS06775 PF11734 TilS substrate C-terminal domain AQ475_RS06780 PF00696 Amino acid kinase family AQ475_RS06780 PF01842 ACT domain AQ475_RS06780 PF13840 ACT domain AQ475_RS06805 PF00873 AcrB/AcrD/AcrF family AQ475_RS06810 PF13533 Biotin-lipoyl like AQ475_RS06815 PF00009 Elongation factor Tu GTP binding domain AQ475_RS06820 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS06820 PF00501 AMP-binding enzyme AQ475_RS06820 PF00668 Condensation domain AQ475_RS06820 PF00550 Phosphopantetheine attachment site AQ475_RS06835 PF00501 AMP-binding enzyme AQ475_RS06835 PF00668 Condensation domain AQ475_RS06835 PF00550 Phosphopantetheine attachment site AQ475_RS06835 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS06845 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AQ475_RS06865 PF00456 Transketolase, thiamine diphosphate binding domain AQ475_RS06865 PF02780 Transketolase, C-terminal domain AQ475_RS06865 PF02779 Transketolase, pyrimidine binding domain AQ475_RS06870 PF02779 Transketolase, pyrimidine binding domain AQ475_RS06870 PF02780 Transketolase, C-terminal domain AQ475_RS06880 PF01757 Acyltransferase family AQ475_RS06885 PF00266 Aminotransferase class-V AQ475_RS06895 PF01507 Phosphoadenosine phosphosulfate reductase family AQ475_RS06900 PF00009 Elongation factor Tu GTP binding domain AQ475_RS06905 PF00291 Pyridoxal-phosphate dependent enzyme AQ475_RS06910 PF02655 ATP-grasp domain AQ475_RS06910 PF00206 Lyase AQ475_RS06920 PF00557 Metallopeptidase family M24 AQ475_RS06930 PF01568 Molydopterin dinucleotide binding domain AQ475_RS06930 PF00384 Molybdopterin oxidoreductase AQ475_RS06930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AQ475_RS06950 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS06955 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS06955 PF12911 N-terminal TM domain of oligopeptide transport permease C AQ475_RS06960 PF00005 ABC transporter AQ475_RS06960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ475_RS06965 PF00877 NlpC/P60 family AQ475_RS06970 PF01734 Patatin-like phospholipase AQ475_RS06975 PF00749 tRNA synthetases class I (E and Q), catalytic domain AQ475_RS07010 PF12833 Helix-turn-helix domain AQ475_RS07010 PF02311 AraC-like ligand binding domain AQ475_RS07015 PF03737 Aldolase/RraA AQ475_RS07025 PF01274 Malate synthase AQ475_RS07035 PF03466 LysR substrate binding domain AQ475_RS07035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS07040 PF00582 Universal stress protein family AQ475_RS07045 PF00463 Isocitrate lyase family AQ475_RS07050 PF00271 Helicase conserved C-terminal domain AQ475_RS07050 PF00270 DEAD/DEAH box helicase AQ475_RS07060 PF00814 Glycoprotease family AQ475_RS07070 PF03167 Uracil DNA glycosylase superfamily AQ475_RS07080 PF08543 Phosphomethylpyrimidine kinase AQ475_RS07085 PF07690 Major Facilitator Superfamily AQ475_RS07090 PF01168 Alanine racemase, N-terminal domain AQ475_RS07090 PF00842 Alanine racemase, C-terminal domain AQ475_RS07095 PF18073 Rubredoxin metal binding domain AQ475_RS07105 PF12848 ABC transporter AQ475_RS07105 PF00005 ABC transporter AQ475_RS07110 PF00255 Glutathione peroxidase AQ475_RS07115 PF13091 PLD-like domain AQ475_RS07120 PF05175 Methyltransferase small domain AQ475_RS07125 PF01546 Peptidase family M20/M25/M40 AQ475_RS07125 PF07687 Peptidase dimerisation domain AQ475_RS07130 PF03960 ArsC family AQ475_RS07135 PF14602 Hexapeptide repeat of succinyl-transferase AQ475_RS07135 PF00132 Bacterial transferase hexapeptide (six repeats) AQ475_RS07135 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AQ475_RS07140 PF00155 Aminotransferase class I and II AQ475_RS07150 PF06470 SMC proteins Flexible Hinge Domain AQ475_RS07150 PF02463 RecF/RecN/SMC N terminal domain AQ475_RS07165 PF00533 BRCA1 C Terminus (BRCT) domain AQ475_RS07165 PF03120 NAD-dependent DNA ligase OB-fold domain AQ475_RS07165 PF01653 NAD-dependent DNA ligase adenylation domain AQ475_RS07165 PF12826 Helix-hairpin-helix motif AQ475_RS07165 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AQ475_RS07170 PF01327 Polypeptide deformylase AQ475_RS07175 PF01479 S4 domain AQ475_RS07175 PF00849 RNA pseudouridylate synthase AQ475_RS07180 PF08335 GlnD PII-uridylyltransferase AQ475_RS07180 PF01966 HD domain AQ475_RS07180 PF01909 Nucleotidyltransferase domain AQ475_RS07185 PF00557 Metallopeptidase family M24 AQ475_RS07190 PF00318 Ribosomal protein S2 AQ475_RS07195 PF00889 Elongation factor TS AQ475_RS07200 PF00696 Amino acid kinase family AQ475_RS07205 PF01765 Ribosome recycling factor AQ475_RS07210 PF01255 Putative undecaprenyl diphosphate synthase AQ475_RS07220 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AQ475_RS07220 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AQ475_RS07220 PF13288 DXP reductoisomerase C-terminal domain AQ475_RS07225 PF17820 PDZ domain AQ475_RS07225 PF02163 Peptidase family M50 AQ475_RS07230 PF01103 Surface antigen AQ475_RS07230 PF07244 Surface antigen variable number repeat AQ475_RS07240 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AQ475_RS07240 PF00132 Bacterial transferase hexapeptide (six repeats) AQ475_RS07245 PF07977 FabA-like domain AQ475_RS07250 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AQ475_RS07250 PF00132 Bacterial transferase hexapeptide (six repeats) AQ475_RS07255 PF02684 Lipid-A-disaccharide synthetase AQ475_RS07260 PF01351 Ribonuclease HII AQ475_RS07265 PF08032 RNA 2'-O ribose methyltransferase substrate binding AQ475_RS07265 PF00588 SpoU rRNA Methylase family AQ475_RS07270 PF03618 Kinase/pyrophosphorylase AQ475_RS07275 PF00082 Subtilase family AQ475_RS07275 PF09286 Pro-kumamolisin, activation domain AQ475_RS07285 PF02896 PEP-utilising enzyme, TIM barrel domain AQ475_RS07285 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AQ475_RS07285 PF00391 PEP-utilising enzyme, mobile domain AQ475_RS07295 PF01145 SPFH domain / Band 7 family AQ475_RS07295 PF16200 C-terminal region of band_7 AQ475_RS07300 PF01668 SmpB protein AQ475_RS07310 PF03658 RnfH family Ubiquitin AQ475_RS07315 PF00892 EamA-like transporter family AQ475_RS07335 PF00571 CBS domain AQ475_RS07335 PF00478 IMP dehydrogenase / GMP reductase domain AQ475_RS07345 PF00117 Glutamine amidotransferase class-I AQ475_RS07345 PF00958 GMP synthase C terminal domain AQ475_RS07345 PF02540 NAD synthase AQ475_RS07360 PF09350 Domain of unknown function (DUF1992) AQ475_RS07365 PF14437 MafB19-like deaminase AQ475_RS07370 PF17676 LD-carboxypeptidase C-terminal domain AQ475_RS07370 PF02016 LD-carboxypeptidase N-terminal domain AQ475_RS07375 PF00392 Bacterial regulatory proteins, gntR family AQ475_RS07375 PF07729 FCD domain AQ475_RS07380 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AQ475_RS07385 PF01177 Asp/Glu/Hydantoin racemase AQ475_RS07395 PF01014 Uricase AQ475_RS07395 PF09349 OHCU decarboxylase AQ475_RS07400 PF03561 Allantoicase repeat AQ475_RS07405 PF04115 Ureidoglycolate lyase AQ475_RS07420 PF00576 HIUase/Transthyretin family AQ475_RS07425 PF01979 Amidohydrolase family AQ475_RS07430 PF03466 LysR substrate binding domain AQ475_RS07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS07435 PF07311 Dodecin AQ475_RS07440 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AQ475_RS07440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ475_RS07450 PF01741 Large-conductance mechanosensitive channel, MscL AQ475_RS07465 PF17092 Penicillin-binding protein OB-like domain AQ475_RS07465 PF00905 Penicillin binding protein transpeptidase domain AQ475_RS07465 PF00912 Transglycosylase AQ475_RS07475 PF00291 Pyridoxal-phosphate dependent enzyme AQ475_RS07480 PF07687 Peptidase dimerisation domain AQ475_RS07480 PF01546 Peptidase family M20/M25/M40 AQ475_RS07495 PF17757 UvrB interaction domain AQ475_RS07495 PF03461 TRCF domain AQ475_RS07495 PF00270 DEAD/DEAH box helicase AQ475_RS07495 PF02559 CarD-like/TRCF domain AQ475_RS07495 PF00271 Helicase conserved C-terminal domain AQ475_RS07500 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AQ475_RS07505 PF02542 YgbB family AQ475_RS07510 PF02627 Carboxymuconolactone decarboxylase family AQ475_RS07515 PF00578 AhpC/TSA family AQ475_RS07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS07520 PF00672 HAMP domain AQ475_RS07520 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS07525 PF00072 Response regulator receiver domain AQ475_RS07525 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS07590 PF00850 Histone deacetylase domain AQ475_RS07610 PF02558 Ketopantoate reductase PanE/ApbA AQ475_RS07610 PF08546 Ketopantoate reductase PanE/ApbA C terminal AQ475_RS07615 PF01047 MarR family AQ475_RS07625 PF05697 Bacterial trigger factor protein (TF) AQ475_RS07625 PF05698 Bacterial trigger factor protein (TF) C-terminus AQ475_RS07625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AQ475_RS07630 PF00574 Clp protease AQ475_RS07635 PF10431 C-terminal, D2-small domain, of ClpB protein AQ475_RS07635 PF07724 AAA domain (Cdc48 subfamily) AQ475_RS07635 PF06689 ClpX C4-type zinc finger AQ475_RS07640 PF02190 ATP-dependent protease La (LON) substrate-binding domain AQ475_RS07640 PF05362 Lon protease (S16) C-terminal proteolytic domain AQ475_RS07640 PF00004 ATPase family associated with various cellular activities (AAA) AQ475_RS07675 PF13145 PPIC-type PPIASE domain AQ475_RS07680 PF13472 GDSL-like Lipase/Acylhydrolase family AQ475_RS07685 PF00005 ABC transporter AQ475_RS07690 PF00342 Phosphoglucose isomerase AQ475_RS07695 PF01256 Carbohydrate kinase AQ475_RS07700 PF01266 FAD dependent oxidoreductase AQ475_RS07710 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AQ475_RS07710 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AQ475_RS07710 PF02769 AIR synthase related protein, C-terminal domain AQ475_RS07725 PF01722 BolA-like protein AQ475_RS07730 PF04279 Intracellular septation protein A AQ475_RS07735 PF01641 SelR domain AQ475_RS07740 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AQ475_RS07745 PF00501 AMP-binding enzyme AQ475_RS07745 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS07750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AQ475_RS07750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AQ475_RS07750 PF00378 Enoyl-CoA hydratase/isomerase AQ475_RS07755 PF00857 Isochorismatase family AQ475_RS07760 PF02803 Thiolase, C-terminal domain AQ475_RS07760 PF00108 Thiolase, N-terminal domain AQ475_RS07785 PF00107 Zinc-binding dehydrogenase AQ475_RS07785 PF16884 N-terminal domain of oxidoreductase AQ475_RS07790 PF07859 alpha/beta hydrolase fold AQ475_RS07795 PF13673 Acetyltransferase (GNAT) domain AQ475_RS07805 PF01571 Aminomethyltransferase folate-binding domain AQ475_RS07810 PF02618 YceG-like family AQ475_RS07815 PF02223 Thymidylate kinase AQ475_RS07820 PF09115 DNA polymerase III, delta subunit, C terminal AQ475_RS07825 PF00583 Acetyltransferase (GNAT) family AQ475_RS07830 PF01026 TatD related DNase AQ475_RS07850 PF02463 RecF/RecN/SMC N terminal domain AQ475_RS07855 PF13439 Glycosyltransferase Family 4 AQ475_RS07855 PF00534 Glycosyl transferases group 1 AQ475_RS07875 PF00710 Asparaginase, N-terminal AQ475_RS07875 PF17763 Glutaminase/Asparaginase C-terminal domain AQ475_RS07880 PF04972 BON domain AQ475_RS07880 PF01476 LysM domain AQ475_RS07890 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AQ475_RS07890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AQ475_RS07895 PF01261 Xylose isomerase-like TIM barrel AQ475_RS07900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ475_RS07900 PF00205 Thiamine pyrophosphate enzyme, central domain AQ475_RS07900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ475_RS07905 PF03466 LysR substrate binding domain AQ475_RS07905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS07920 PF04542 Sigma-70 region 2 AQ475_RS07920 PF08281 Sigma-70, region 4 AQ475_RS07930 PF01250 Ribosomal protein S6 AQ475_RS07940 PF01084 Ribosomal protein S18 AQ475_RS07945 PF03948 Ribosomal protein L9, C-terminal domain AQ475_RS07945 PF01281 Ribosomal protein L9, N-terminal domain AQ475_RS07950 PF03796 DnaB-like helicase C terminal domain AQ475_RS07950 PF00772 DnaB-like helicase N terminal domain AQ475_RS07960 PF01384 Phosphate transporter family AQ475_RS07965 PF00877 NlpC/P60 family AQ475_RS07970 PF13638 PIN domain AQ475_RS07970 PF02562 PhoH-like protein AQ475_RS07975 PF00578 AhpC/TSA family AQ475_RS07980 PF01522 Polysaccharide deacetylase AQ475_RS07985 PF01370 NAD dependent epimerase/dehydratase family AQ475_RS07985 PF00551 Formyl transferase AQ475_RS07985 PF02911 Formyl transferase, C-terminal domain AQ475_RS07990 PF00551 Formyl transferase AQ475_RS07990 PF02911 Formyl transferase, C-terminal domain AQ475_RS07990 PF01370 NAD dependent epimerase/dehydratase family AQ475_RS07995 PF00535 Glycosyl transferase family 2 AQ475_RS08000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AQ475_RS08010 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AQ475_RS08020 PF00155 Aminotransferase class I and II AQ475_RS08025 PF00742 Homoserine dehydrogenase AQ475_RS08025 PF03447 Homoserine dehydrogenase, NAD binding domain AQ475_RS08025 PF01842 ACT domain AQ475_RS08030 PF14821 Threonine synthase N terminus AQ475_RS08030 PF00291 Pyridoxal-phosphate dependent enzyme AQ475_RS08035 PF03453 MoeA N-terminal region (domain I and II) AQ475_RS08035 PF03454 MoeA C-terminal region (domain IV) AQ475_RS08035 PF00994 Probable molybdopterin binding domain AQ475_RS08040 PF02597 ThiS family AQ475_RS08045 PF02391 MoaE protein AQ475_RS08050 PF01152 Bacterial-like globin AQ475_RS08055 PF02082 Transcriptional regulator AQ475_RS08060 PF17871 AAA lid domain AQ475_RS08060 PF07724 AAA domain (Cdc48 subfamily) AQ475_RS08060 PF00004 ATPase family associated with various cellular activities (AAA) AQ475_RS08060 PF10431 C-terminal, D2-small domain, of ClpB protein AQ475_RS08060 PF02861 Clp amino terminal domain, pathogenicity island component AQ475_RS08090 PF01554 MatE AQ475_RS08100 PF01197 Ribosomal protein L31 AQ475_RS08105 PF06167 Glucose-regulated metallo-peptidase M90 AQ475_RS08115 PF13411 MerR HTH family regulatory protein AQ475_RS08120 PF01610 Transposase AQ475_RS08120 PF13542 Helix-turn-helix domain of transposase family ISL3 AQ475_RS08120 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AQ475_RS08125 PF07498 Rho termination factor, N-terminal domain AQ475_RS08125 PF07497 Rho termination factor, RNA-binding domain AQ475_RS08125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ475_RS08135 PF00085 Thioredoxin AQ475_RS08145 PF12170 DNA polymerase III tau subunit V interacting with alpha AQ475_RS08145 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AQ475_RS08145 PF12169 DNA polymerase III subunits gamma and tau domain III AQ475_RS08150 PF02575 YbaB/EbfC DNA-binding family AQ475_RS08155 PF02132 RecR protein AQ475_RS08155 PF13662 Toprim domain AQ475_RS08160 PF02515 CoA-transferase family III AQ475_RS08165 PF01975 Survival protein SurE AQ475_RS08175 PF01551 Peptidase family M23 AQ475_RS08175 PF01476 LysM domain AQ475_RS08180 PF04542 Sigma-70 region 2 AQ475_RS08180 PF04539 Sigma-70 region 3 AQ475_RS08180 PF04545 Sigma-70, region 4 AQ475_RS08180 PF00140 Sigma-70 factor, region 1.2 AQ475_RS08195 PF05958 tRNA (Uracil-5-)-methyltransferase AQ475_RS08200 PF01027 Inhibitor of apoptosis-promoting Bax1 AQ475_RS08205 PF00334 Nucleoside diphosphate kinase AQ475_RS08210 PF04055 Radical SAM superfamily AQ475_RS08220 PF04551 GcpE protein AQ475_RS08225 PF03129 Anticodon binding domain AQ475_RS08225 PF13393 Histidyl-tRNA synthetase AQ475_RS08235 PF13360 PQQ-like domain AQ475_RS08240 PF01926 50S ribosome-binding GTPase AQ475_RS08240 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AQ475_RS08245 PF17209 Hfq protein AQ475_RS08250 PF16360 GTP-binding GTPase Middle Region AQ475_RS08250 PF13167 GTP-binding GTPase N-terminal AQ475_RS08250 PF01926 50S ribosome-binding GTPase AQ475_RS08255 PF12221 Bacterial membrane protein N terminal AQ475_RS08255 PF01145 SPFH domain / Band 7 family AQ475_RS08260 PF01145 SPFH domain / Band 7 family AQ475_RS08265 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AQ475_RS08270 PF13393 Histidyl-tRNA synthetase AQ475_RS08275 PF00709 Adenylosuccinate synthetase AQ475_RS08280 PF00156 Phosphoribosyl transferase domain AQ475_RS08285 PF02705 K+ potassium transporter AQ475_RS08290 PF16921 Tex protein YqgF-like domain AQ475_RS08290 PF09371 Tex-like protein N-terminal domain AQ475_RS08290 PF00575 S1 RNA binding domain AQ475_RS08290 PF17674 HHH domain AQ475_RS08305 PF04851 Type III restriction enzyme, res subunit AQ475_RS08305 PF13307 Helicase C-terminal domain AQ475_RS08310 PF13525 Outer membrane lipoprotein AQ475_RS08315 PF00849 RNA pseudouridylate synthase AQ475_RS08315 PF01479 S4 domain AQ475_RS08320 PF02578 Multi-copper polyphenol oxidoreductase laccase AQ475_RS08325 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AQ475_RS08330 PF02803 Thiolase, C-terminal domain AQ475_RS08330 PF00108 Thiolase, N-terminal domain AQ475_RS08335 PF00106 short chain dehydrogenase AQ475_RS08340 PF05233 PHB accumulation regulatory domain AQ475_RS08340 PF07879 PHB/PHA accumulation regulator DNA-binding domain AQ475_RS08345 PF18693 TRAM domain AQ475_RS08345 PF04055 Radical SAM superfamily AQ475_RS08345 PF00919 Uncharacterized protein family UPF0004 AQ475_RS08350 PF00294 pfkB family carbohydrate kinase AQ475_RS08355 PF00108 Thiolase, N-terminal domain AQ475_RS08355 PF02803 Thiolase, C-terminal domain AQ475_RS08365 PF01053 Cys/Met metabolism PLP-dependent enzyme AQ475_RS08385 PF03649 Uncharacterised protein family (UPF0014) AQ475_RS08390 PF00005 ABC transporter AQ475_RS08395 PF05170 AsmA family AQ475_RS08400 PF12848 ABC transporter AQ475_RS08400 PF00005 ABC transporter AQ475_RS08405 PF13609 Gram-negative porin AQ475_RS08410 PF00171 Aldehyde dehydrogenase family AQ475_RS08415 PF03060 Nitronate monooxygenase AQ475_RS08420 PF03922 OmpW family AQ475_RS08430 PF01566 Natural resistance-associated macrophage protein AQ475_RS08435 PF13416 Bacterial extracellular solute-binding protein AQ475_RS08440 PF08402 TOBE domain AQ475_RS08440 PF00005 ABC transporter AQ475_RS08445 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS08450 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS08465 PF00753 Metallo-beta-lactamase superfamily AQ475_RS08470 PF01590 GAF domain AQ475_RS08470 PF02954 Bacterial regulatory protein, Fis family AQ475_RS08470 PF00158 Sigma-54 interaction domain AQ475_RS08480 PF13443 Cro/C1-type HTH DNA-binding domain AQ475_RS08490 PF02321 Outer membrane efflux protein AQ475_RS08495 PF00873 AcrB/AcrD/AcrF family AQ475_RS08500 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AQ475_RS08505 PF00440 Bacterial regulatory proteins, tetR family AQ475_RS08510 PF00654 Voltage gated chloride channel AQ475_RS08515 PF03601 Conserved hypothetical protein 698 AQ475_RS08520 PF03466 LysR substrate binding domain AQ475_RS08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS08535 PF00294 pfkB family carbohydrate kinase AQ475_RS08545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AQ475_RS08545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ475_RS08550 PF00356 Bacterial regulatory proteins, lacI family AQ475_RS08600 PF00056 lactate/malate dehydrogenase, NAD binding domain AQ475_RS08600 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AQ475_RS08620 PF01544 CorA-like Mg2+ transporter protein AQ475_RS08625 PF03795 YCII-related domain AQ475_RS08650 PF00924 Mechanosensitive ion channel AQ475_RS08650 PF12795 Mechanosensitive ion channel porin domain AQ475_RS08650 PF12794 Mechanosensitive ion channel inner membrane domain 1 AQ475_RS08655 PF12801 4Fe-4S binding domain AQ475_RS08655 PF04205 FMN-binding domain AQ475_RS08680 PF12679 ABC-2 family transporter protein AQ475_RS08685 PF00005 ABC transporter AQ475_RS08695 PF13473 Cupredoxin-like domain AQ475_RS08695 PF18764 Nitrous oxide reductase propeller repeat AQ475_RS08695 PF18793 Nitrous oxide reductase propeller repeat 2 AQ475_RS08700 PF02424 ApbE family AQ475_RS08705 PF00005 ABC transporter AQ475_RS08705 PF13732 Domain of unknown function (DUF4162) AQ475_RS08720 PF02734 DAK2 domain AQ475_RS08720 PF02733 Dak1 domain AQ475_RS08730 PF00465 Iron-containing alcohol dehydrogenase AQ475_RS08735 PF01263 Aldose 1-epimerase AQ475_RS08740 PF12833 Helix-turn-helix domain AQ475_RS08750 PF13407 Periplasmic binding protein domain AQ475_RS08755 PF00005 ABC transporter AQ475_RS08760 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS08765 PF13407 Periplasmic binding protein domain AQ475_RS08770 PF00005 ABC transporter AQ475_RS08775 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS08780 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS08790 PF07732 Multicopper oxidase AQ475_RS08790 PF07731 Multicopper oxidase AQ475_RS08790 PF00394 Multicopper oxidase AQ475_RS08815 PF01593 Flavin containing amine oxidoreductase AQ475_RS08835 PF04545 Sigma-70, region 4 AQ475_RS08835 PF04542 Sigma-70 region 2 AQ475_RS08840 PF08212 Lipocalin-like domain AQ475_RS08845 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AQ475_RS08850 PF00361 Proton-conducting membrane transporter AQ475_RS08850 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AQ475_RS08850 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AQ475_RS08855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS08855 PF03466 LysR substrate binding domain AQ475_RS08870 PF00975 Thioesterase domain AQ475_RS08875 PF07859 alpha/beta hydrolase fold AQ475_RS08880 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ475_RS08885 PF00501 AMP-binding enzyme AQ475_RS08885 PF00550 Phosphopantetheine attachment site AQ475_RS08885 PF07993 Male sterility protein AQ475_RS08885 PF00550 Phosphopantetheine attachment site AQ475_RS08885 PF07993 Male sterility protein AQ475_RS08885 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS08885 PF00668 Condensation domain AQ475_RS08885 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS08885 PF00501 AMP-binding enzyme AQ475_RS08885 PF00668 Condensation domain AQ475_RS08895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ475_RS08895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS08895 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS08900 PF00550 Phosphopantetheine attachment site AQ475_RS08900 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ475_RS08900 PF00698 Acyl transferase domain AQ475_RS08900 PF00668 Condensation domain AQ475_RS08900 PF16197 Ketoacyl-synthetase C-terminal extension AQ475_RS08900 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ475_RS08905 PF07993 Male sterility protein AQ475_RS08905 PF00668 Condensation domain AQ475_RS08905 PF00550 Phosphopantetheine attachment site AQ475_RS08905 PF00501 AMP-binding enzyme AQ475_RS08905 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS08910 PF08659 KR domain AQ475_RS08910 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ475_RS08910 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ475_RS08910 PF00698 Acyl transferase domain AQ475_RS08910 PF00550 Phosphopantetheine attachment site AQ475_RS08910 PF16197 Ketoacyl-synthetase C-terminal extension AQ475_RS08920 PF00668 Condensation domain AQ475_RS08920 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS08920 PF00501 AMP-binding enzyme AQ475_RS08920 PF00550 Phosphopantetheine attachment site AQ475_RS08930 PF12852 Cupin AQ475_RS08930 PF12833 Helix-turn-helix domain AQ475_RS08935 PF13609 Gram-negative porin AQ475_RS08940 PF02311 AraC-like ligand binding domain AQ475_RS08940 PF12833 Helix-turn-helix domain AQ475_RS08950 PF01584 CheW-like domain AQ475_RS08955 PF00672 HAMP domain AQ475_RS08955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ475_RS08955 PF02203 Tar ligand binding domain homologue AQ475_RS08970 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS08970 PF00501 AMP-binding enzyme AQ475_RS08975 PF08241 Methyltransferase domain AQ475_RS08980 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AQ475_RS08985 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS08990 PF00005 ABC transporter AQ475_RS08995 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS09000 PF00857 Isochorismatase family AQ475_RS09005 PF07690 Major Facilitator Superfamily AQ475_RS09020 PF13520 Amino acid permease AQ475_RS09030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AQ475_RS09030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AQ475_RS09035 PF00696 Amino acid kinase family AQ475_RS09040 PF00561 alpha/beta hydrolase fold AQ475_RS09040 PF00106 short chain dehydrogenase AQ475_RS09050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS09050 PF03466 LysR substrate binding domain AQ475_RS09055 PF02798 Glutathione S-transferase, N-terminal domain AQ475_RS09060 PF01047 MarR family AQ475_RS09065 PF07690 Major Facilitator Superfamily AQ475_RS09070 PF02638 Glycosyl hydrolase-like 10 AQ475_RS09075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ475_RS09085 PF02571 Precorrin-6x reductase CbiJ/CobK AQ475_RS09090 PF01888 CbiD AQ475_RS09095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ475_RS09100 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AQ475_RS09100 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AQ475_RS09105 PF02570 Precorrin-8X methylmutase AQ475_RS09110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ475_RS09115 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ475_RS09120 PF08329 Chitinase A, N-terminal domain AQ475_RS09120 PF00704 Glycosyl hydrolases family 18 AQ475_RS09130 PF02230 Phospholipase/Carboxylesterase AQ475_RS09140 PF07728 AAA domain (dynein-related subfamily) AQ475_RS09140 PF13519 von Willebrand factor type A domain AQ475_RS09140 PF17863 AAA lid domain AQ475_RS09155 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ475_RS09155 PF07683 Cobalamin synthesis protein cobW C-terminal domain AQ475_RS09160 PF03824 High-affinity nickel-transport protein AQ475_RS09170 PF12557 Cob(I)alamin adenosyltransferase N terminal AQ475_RS09170 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AQ475_RS09175 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AQ475_RS09175 PF07685 CobB/CobQ-like glutamine amidotransferase domain AQ475_RS09185 PF00551 Formyl transferase AQ475_RS09190 PF00593 TonB dependent receptor AQ475_RS09190 PF07715 TonB-dependent Receptor Plug Domain AQ475_RS09195 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AQ475_RS09200 PF00550 Phosphopantetheine attachment site AQ475_RS09200 PF00668 Condensation domain AQ475_RS09200 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS09200 PF00501 AMP-binding enzyme AQ475_RS09205 PF00501 AMP-binding enzyme AQ475_RS09205 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS09205 PF00550 Phosphopantetheine attachment site AQ475_RS09205 PF00668 Condensation domain AQ475_RS09210 PF00005 ABC transporter AQ475_RS09210 PF00664 ABC transporter transmembrane region AQ475_RS09220 PF01497 Periplasmic binding protein AQ475_RS09230 PF01032 FecCD transport family AQ475_RS09235 PF00005 ABC transporter AQ475_RS09245 PF03621 MbtH-like protein AQ475_RS09265 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ475_RS09265 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ475_RS09270 PF08240 Alcohol dehydrogenase GroES-like domain AQ475_RS09270 PF00107 Zinc-binding dehydrogenase AQ475_RS09275 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS09280 PF00005 ABC transporter AQ475_RS09285 PF13407 Periplasmic binding protein domain AQ475_RS09310 PF04954 Siderophore-interacting protein AQ475_RS09310 PF08021 Siderophore-interacting FAD-binding domain AQ475_RS09310 PF00005 ABC transporter AQ475_RS09310 PF00664 ABC transporter transmembrane region AQ475_RS09325 PF02321 Outer membrane efflux protein AQ475_RS09330 PF00873 AcrB/AcrD/AcrF family AQ475_RS09335 PF00529 HlyD membrane-fusion protein of T1SS AQ475_RS09335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AQ475_RS09340 PF08361 MAATS-type transcriptional repressor, C-terminal region AQ475_RS09340 PF00440 Bacterial regulatory proteins, tetR family AQ475_RS09345 PF01476 LysM domain AQ475_RS09345 PF01551 Peptidase family M23 AQ475_RS09345 PF08525 Opacity-associated protein A N-terminal motif AQ475_RS09350 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS09355 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS09360 PF01464 Transglycosylase SLT domain AQ475_RS09360 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ475_RS09390 PF00437 Type II/IV secretion system protein AQ475_RS09405 PF04972 BON domain AQ475_RS09405 PF13629 Pilus formation protein N terminal region AQ475_RS09405 PF00263 Bacterial type II and III secretion system protein AQ475_RS09430 PF00083 Sugar (and other) transporter AQ475_RS09435 PF04293 SpoVR like protein AQ475_RS09440 PF04285 Protein of unknown function (DUF444) AQ475_RS09445 PF06798 PrkA serine protein kinase C-terminal domain AQ475_RS09445 PF08298 PrkA AAA domain AQ475_RS09450 PF00672 HAMP domain AQ475_RS09450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ475_RS09450 PF02203 Tar ligand binding domain homologue AQ475_RS09455 PF00294 pfkB family carbohydrate kinase AQ475_RS09460 PF00356 Bacterial regulatory proteins, lacI family AQ475_RS09465 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS09470 PF00005 ABC transporter AQ475_RS09475 PF13407 Periplasmic binding protein domain AQ475_RS09485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS09485 PF03466 LysR substrate binding domain AQ475_RS09490 PF12857 TOBE-like domain AQ475_RS09490 PF00005 ABC transporter AQ475_RS09495 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS09500 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS09510 PF01726 LexA DNA binding domain AQ475_RS09510 PF00717 Peptidase S24-like AQ475_RS09530 PF00005 ABC transporter AQ475_RS09535 PF01061 ABC-2 type transporter AQ475_RS09545 PF03773 Predicted permease AQ475_RS09550 PF00248 Aldo/keto reductase family AQ475_RS09560 PF01638 HxlR-like helix-turn-helix AQ475_RS09570 PF00375 Sodium:dicarboxylate symporter family AQ475_RS09575 PF01207 Dihydrouridine synthase (Dus) AQ475_RS09595 PF03459 TOBE domain AQ475_RS09600 PF00005 ABC transporter AQ475_RS09605 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS09610 PF00296 Luciferase-like monooxygenase AQ475_RS09630 PF00378 Enoyl-CoA hydratase/isomerase AQ475_RS09635 PF00893 Small Multidrug Resistance protein AQ475_RS09640 PF03928 Haem-degrading AQ475_RS09650 PF09297 NADH pyrophosphatase zinc ribbon domain AQ475_RS09650 PF00293 NUDIX domain AQ475_RS09655 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AQ475_RS09660 PF04377 Arginine-tRNA-protein transferase, C terminus AQ475_RS09660 PF04376 Arginine-tRNA-protein transferase, N terminus AQ475_RS09665 PF01180 Dihydroorotate dehydrogenase AQ475_RS09670 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ475_RS09675 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS09680 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AQ475_RS09680 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AQ475_RS09685 PF07729 FCD domain AQ475_RS09685 PF00392 Bacterial regulatory proteins, gntR family AQ475_RS09690 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AQ475_RS09695 PF01510 N-acetylmuramoyl-L-alanine amidase AQ475_RS09700 PF00588 SpoU rRNA Methylase family AQ475_RS09700 PF08032 RNA 2'-O ribose methyltransferase substrate binding AQ475_RS09705 PF00575 S1 RNA binding domain AQ475_RS09705 PF17876 Cold shock domain AQ475_RS09705 PF00773 RNB domain AQ475_RS09705 PF08461 Ribonuclease R winged-helix domain AQ475_RS09705 PF08206 Ribonuclease B OB domain AQ475_RS09720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ475_RS09720 PF02203 Tar ligand binding domain homologue AQ475_RS09720 PF00672 HAMP domain AQ475_RS09730 PF00916 Sulfate permease family AQ475_RS09730 PF01740 STAS domain AQ475_RS09740 PF00958 GMP synthase C terminal domain AQ475_RS09740 PF03352 Methyladenine glycosylase AQ475_RS09740 PF13302 Acetyltransferase (GNAT) domain AQ475_RS09740 PF13673 Acetyltransferase (GNAT) domain AQ475_RS09740 PF00117 Glutamine amidotransferase class-I AQ475_RS09745 PF07690 Major Facilitator Superfamily AQ475_RS09750 PF00440 Bacterial regulatory proteins, tetR family AQ475_RS09755 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS09755 PF00501 AMP-binding enzyme AQ475_RS09770 PF17209 Hfq protein AQ475_RS09780 PF00158 Sigma-54 interaction domain AQ475_RS09780 PF00072 Response regulator receiver domain AQ475_RS09780 PF02954 Bacterial regulatory protein, Fis family AQ475_RS09810 PF00437 Type II/IV secretion system protein AQ475_RS09820 PF13629 Pilus formation protein N terminal region AQ475_RS09820 PF04972 BON domain AQ475_RS09820 PF00263 Bacterial type II and III secretion system protein AQ475_RS09875 PF03969 AFG1-like ATPase AQ475_RS09880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ475_RS09880 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ475_RS09885 PF00364 Biotin-requiring enzyme AQ475_RS09885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AQ475_RS09885 PF02817 e3 binding domain AQ475_RS09890 PF16078 2-oxoglutarate dehydrogenase N-terminus AQ475_RS09890 PF02779 Transketolase, pyrimidine binding domain AQ475_RS09890 PF00676 Dehydrogenase E1 component AQ475_RS09890 PF16870 2-oxoglutarate dehydrogenase C-terminal AQ475_RS09895 PF03144 Elongation factor Tu domain 2 AQ475_RS09895 PF00009 Elongation factor Tu GTP binding domain AQ475_RS09895 PF00679 Elongation factor G C-terminus AQ475_RS09900 PF01047 MarR family AQ475_RS09905 PF02321 Outer membrane efflux protein AQ475_RS09910 PF00529 HlyD membrane-fusion protein of T1SS AQ475_RS09910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AQ475_RS09915 PF07690 Major Facilitator Superfamily AQ475_RS09920 PF01509 TruB family pseudouridylate synthase (N terminal domain) AQ475_RS09920 PF16198 tRNA pseudouridylate synthase B C-terminal domain AQ475_RS09920 PF09157 Pseudouridine synthase II TruB, C-terminal AQ475_RS09925 PF02033 Ribosome-binding factor A AQ475_RS09930 PF00009 Elongation factor Tu GTP binding domain AQ475_RS09930 PF04760 Translation initiation factor IF-2, N-terminal region AQ475_RS09930 PF11987 Translation-initiation factor 2 AQ475_RS09930 PF08364 Bacterial translation initiation factor IF-2 associated region AQ475_RS09935 PF13184 NusA-like KH domain AQ475_RS09935 PF08529 NusA N-terminal domain AQ475_RS09940 PF17384 RimP C-terminal SH3 domain AQ475_RS09940 PF02576 RimP N-terminal domain AQ475_RS09945 PF01479 S4 domain AQ475_RS09945 PF00849 RNA pseudouridylate synthase AQ475_RS09950 PF04079 Segregation and condensation complex subunit ScpB AQ475_RS09955 PF03466 LysR substrate binding domain AQ475_RS09955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS09995 PF06804 NlpB/DapX lipoprotein AQ475_RS10030 PF00216 Bacterial DNA-binding protein AQ475_RS10035 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AQ475_RS10035 PF01588 Putative tRNA binding domain AQ475_RS10035 PF03147 Ferredoxin-fold anticodon binding domain AQ475_RS10035 PF03484 tRNA synthetase B5 domain AQ475_RS10035 PF03483 B3/4 domain AQ475_RS10040 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AQ475_RS10040 PF01409 tRNA synthetases class II core domain (F) AQ475_RS10045 PF00453 Ribosomal protein L20 AQ475_RS10050 PF01632 Ribosomal protein L35 AQ475_RS10055 PF05198 Translation initiation factor IF-3, N-terminal domain AQ475_RS10055 PF00707 Translation initiation factor IF-3, C-terminal domain AQ475_RS10060 PF02824 TGS domain AQ475_RS10060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ475_RS10060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ475_RS10060 PF03129 Anticodon binding domain AQ475_RS10070 PF13291 ACT domain AQ475_RS10070 PF04607 Region found in RelA / SpoT proteins AQ475_RS10070 PF02824 TGS domain AQ475_RS10075 PF01042 Endoribonuclease L-PSP AQ475_RS10095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS10095 PF03466 LysR substrate binding domain AQ475_RS10115 PF01144 Coenzyme A transferase AQ475_RS10120 PF01144 Coenzyme A transferase AQ475_RS10150 PF01264 Chorismate synthase AQ475_RS10155 PF07690 Major Facilitator Superfamily AQ475_RS10170 PF03631 Virulence factor BrkB AQ475_RS10175 PF03358 NADPH-dependent FMN reductase AQ475_RS10185 PF02913 FAD linked oxidases, C-terminal domain AQ475_RS10185 PF01565 FAD binding domain AQ475_RS10200 PF03466 LysR substrate binding domain AQ475_RS10200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS10205 PF02321 Outer membrane efflux protein AQ475_RS10210 PF04632 Fusaric acid resistance protein family AQ475_RS10220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AQ475_RS10225 PF00672 HAMP domain AQ475_RS10225 PF02203 Tar ligand binding domain homologue AQ475_RS10225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ475_RS10230 PF07690 Major Facilitator Superfamily AQ475_RS10235 PF01048 Phosphorylase superfamily AQ475_RS10240 PF00580 UvrD/REP helicase N-terminal domain AQ475_RS10240 PF13361 UvrD-like helicase C-terminal domain AQ475_RS10245 PF00133 tRNA synthetases class I (I, L, M and V) AQ475_RS10245 PF10458 Valyl tRNA synthetase tRNA binding arm AQ475_RS10245 PF08264 Anticodon-binding domain of tRNA AQ475_RS10250 PF00483 Nucleotidyl transferase AQ475_RS10260 PF00672 HAMP domain AQ475_RS10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS10260 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS10260 PF14827 Double sensory domain of two-component sensor kinase AQ475_RS10260 PF13426 PAS domain AQ475_RS10270 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS10270 PF00072 Response regulator receiver domain AQ475_RS10280 PF01206 Sulfurtransferase TusA AQ475_RS10285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AQ475_RS10285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AQ475_RS10290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AQ475_RS10290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AQ475_RS10295 PF01418 Helix-turn-helix domain, rpiR family AQ475_RS10295 PF01380 SIS domain AQ475_RS10305 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS10310 PF00005 ABC transporter AQ475_RS10315 PF00294 pfkB family carbohydrate kinase AQ475_RS10320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ475_RS10320 PF00205 Thiamine pyrophosphate enzyme, central domain AQ475_RS10320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ475_RS10325 PF01261 Xylose isomerase-like TIM barrel AQ475_RS10330 PF04962 KduI/IolB family AQ475_RS10335 PF00005 ABC transporter AQ475_RS10340 PF00005 ABC transporter AQ475_RS10340 PF12399 Branched-chain amino acid ATP-binding cassette transporter AQ475_RS10345 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS10350 PF03061 Thioesterase superfamily AQ475_RS10355 PF00465 Iron-containing alcohol dehydrogenase AQ475_RS10360 PF01906 Putative heavy-metal-binding AQ475_RS10365 PF00293 NUDIX domain AQ475_RS10370 PF13180 PDZ domain AQ475_RS10380 PF06779 Uncharacterised MFS-type transporter YbfB AQ475_RS10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS10385 PF03466 LysR substrate binding domain AQ475_RS10390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ475_RS10390 PF01411 tRNA synthetases class II (A) AQ475_RS10390 PF02272 DHHA1 domain AQ475_RS10395 PF02515 CoA-transferase family III AQ475_RS10410 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AQ475_RS10410 PF00749 tRNA synthetases class I (E and Q), catalytic domain AQ475_RS10415 PF00293 NUDIX domain AQ475_RS10425 PF00933 Glycosyl hydrolase family 3 N terminal domain AQ475_RS10440 PF04185 Phosphoesterase family AQ475_RS10440 PF05506 Domain of unknown function (DUF756) AQ475_RS10445 PF12241 Trans-2-enoyl-CoA reductase catalytic region AQ475_RS10445 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AQ475_RS10445 PF07055 Enoyl reductase FAD binding domain AQ475_RS10450 PF13649 Methyltransferase domain AQ475_RS10460 PF00072 Response regulator receiver domain AQ475_RS10460 PF00196 Bacterial regulatory proteins, luxR family AQ475_RS10465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS10465 PF00072 Response regulator receiver domain AQ475_RS10465 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AQ475_RS10465 PF00672 HAMP domain AQ475_RS10465 PF01627 Hpt domain AQ475_RS10465 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS10505 PF03466 LysR substrate binding domain AQ475_RS10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS10510 PF07690 Major Facilitator Superfamily AQ475_RS10530 PF01527 Transposase AQ475_RS10535 PF13276 HTH-like domain AQ475_RS10535 PF13683 Integrase core domain AQ475_RS10555 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AQ475_RS10555 PF04717 Type VI secretion system, phage-baseplate injector AQ475_RS10555 PF13296 Putative type VI secretion system Rhs element Vgr AQ475_RS10585 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AQ475_RS10585 PF13296 Putative type VI secretion system Rhs element Vgr AQ475_RS10585 PF04717 Type VI secretion system, phage-baseplate injector AQ475_RS10590 PF13296 Putative type VI secretion system Rhs element Vgr AQ475_RS10590 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AQ475_RS10590 PF04717 Type VI secretion system, phage-baseplate injector AQ475_RS10630 PF13296 Putative type VI secretion system Rhs element Vgr AQ475_RS10630 PF04717 Type VI secretion system, phage-baseplate injector AQ475_RS10630 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) AQ475_RS10660 PF10503 Esterase PHB depolymerase AQ475_RS10665 PF00816 H-NS histone family AQ475_RS10670 PF07690 Major Facilitator Superfamily AQ475_RS10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS10675 PF03466 LysR substrate binding domain AQ475_RS10690 PF00589 Phage integrase family AQ475_RS10720 PF02796 Helix-turn-helix domain of resolvase AQ475_RS10720 PF00239 Resolvase, N terminal domain AQ475_RS10735 PF02673 Bacitracin resistance protein BacA AQ475_RS10750 PF01551 Peptidase family M23 AQ475_RS10750 PF01476 LysM domain AQ475_RS10755 PF00501 AMP-binding enzyme AQ475_RS10755 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS10770 PF01554 MatE AQ475_RS10815 PF02541 Ppx/GppA phosphatase family AQ475_RS10820 PF13090 Polyphosphate kinase C-terminal domain 2 AQ475_RS10820 PF02503 Polyphosphate kinase middle domain AQ475_RS10820 PF17941 Polyphosphate kinase C-terminal domain 1 AQ475_RS10820 PF13089 Polyphosphate kinase N-terminal domain AQ475_RS10825 PF00989 PAS fold AQ475_RS10825 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS10825 PF11808 Phosphate regulon sensor protein PhoR AQ475_RS10825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS10830 PF00072 Response regulator receiver domain AQ475_RS10830 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS10835 PF01895 PhoU domain AQ475_RS10840 PF00005 ABC transporter AQ475_RS10845 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS10850 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS10855 PF12849 PBP superfamily domain AQ475_RS10860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AQ475_RS10860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AQ475_RS10860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AQ475_RS10860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AQ475_RS10865 PF00809 Pterin binding enzyme AQ475_RS10870 PF17862 AAA+ lid domain AQ475_RS10870 PF06480 FtsH Extracellular AQ475_RS10870 PF01434 Peptidase family M41 AQ475_RS10870 PF00004 ATPase family associated with various cellular activities (AAA) AQ475_RS10875 PF01728 FtsJ-like methyltransferase AQ475_RS10880 PF01985 CRS1 / YhbY (CRM) domain AQ475_RS10890 PF01272 Transcription elongation factor, GreA/GreB, C-term AQ475_RS10890 PF03449 Transcription elongation factor, N-terminal AQ475_RS10895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AQ475_RS10895 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AQ475_RS10895 PF02142 MGS-like domain AQ475_RS10900 PF01810 LysE type translocator AQ475_RS10905 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AQ475_RS10905 PF00117 Glutamine amidotransferase class-I AQ475_RS10910 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AQ475_RS10910 PF12833 Helix-turn-helix domain AQ475_RS10925 PF01464 Transglycosylase SLT domain AQ475_RS10925 PF01476 LysM domain AQ475_RS10930 PF00753 Metallo-beta-lactamase superfamily AQ475_RS10930 PF16123 Hydroxyacylglutathione hydrolase C-terminus AQ475_RS10935 PF08241 Methyltransferase domain AQ475_RS10940 PF00075 RNase H AQ475_RS10945 PF00929 Exonuclease AQ475_RS10950 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AQ475_RS10955 PF08946 Osmosensory transporter coiled coil AQ475_RS10955 PF00083 Sugar (and other) transporter AQ475_RS10970 PF13091 PLD-like domain AQ475_RS10975 PF00698 Acyl transferase domain AQ475_RS10980 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AQ475_RS10985 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AQ475_RS10995 PF01039 Carboxyl transferase domain AQ475_RS11000 PF06857 Malonate decarboxylase delta subunit (MdcD) AQ475_RS11005 PF16957 Malonate decarboxylase, alpha subunit, transporter AQ475_RS11020 PF03466 LysR substrate binding domain AQ475_RS11020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS11025 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AQ475_RS11025 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AQ475_RS11030 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AQ475_RS11030 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AQ475_RS11045 PF00011 Hsp20/alpha crystallin family AQ475_RS11065 PF00392 Bacterial regulatory proteins, gntR family AQ475_RS11065 PF00155 Aminotransferase class I and II AQ475_RS11090 PF03466 LysR substrate binding domain AQ475_RS11090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS11120 PF08448 PAS fold AQ475_RS11120 PF00990 Diguanylate cyclase, GGDEF domain AQ475_RS11145 PF00356 Bacterial regulatory proteins, lacI family AQ475_RS11155 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS11170 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS11175 PF00005 ABC transporter AQ475_RS11175 PF08402 TOBE domain AQ475_RS11180 PF00149 Calcineurin-like phosphoesterase AQ475_RS11185 PF07690 Major Facilitator Superfamily AQ475_RS11190 PF00892 EamA-like transporter family AQ475_RS11200 PF00174 Oxidoreductase molybdopterin binding domain AQ475_RS11205 PF01292 Prokaryotic cytochrome b561 AQ475_RS11220 PF01964 Radical SAM ThiC family AQ475_RS11220 PF13667 ThiC-associated domain AQ475_RS11235 PF00892 EamA-like transporter family AQ475_RS11240 PF00563 EAL domain AQ475_RS11240 PF12792 CSS motif domain associated with EAL AQ475_RS11245 PF00472 RF-1 domain AQ475_RS11250 PF13538 UvrD-like helicase C-terminal domain AQ475_RS11255 PF13361 UvrD-like helicase C-terminal domain AQ475_RS11255 PF00580 UvrD/REP helicase N-terminal domain AQ475_RS11255 PF12705 PD-(D/E)XK nuclease superfamily AQ475_RS11260 PF17946 RecC C-terminal domain AQ475_RS11270 PF00324 Amino acid permease AQ475_RS11280 PF13416 Bacterial extracellular solute-binding protein AQ475_RS11285 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS11290 PF00005 ABC transporter AQ475_RS11290 PF08402 TOBE domain AQ475_RS11295 PF13404 AsnC-type helix-turn-helix domain AQ475_RS11295 PF01037 Lrp/AsnC ligand binding domain AQ475_RS11310 PF02082 Transcriptional regulator AQ475_RS11330 PF13533 Biotin-lipoyl like AQ475_RS11335 PF00873 AcrB/AcrD/AcrF family AQ475_RS11340 PF00873 AcrB/AcrD/AcrF family AQ475_RS11350 PF00578 AhpC/TSA family AQ475_RS11355 PF00990 Diguanylate cyclase, GGDEF domain AQ475_RS11355 PF03707 Bacterial signalling protein N terminal repeat AQ475_RS11355 PF00563 EAL domain AQ475_RS11365 PF00034 Cytochrome c AQ475_RS11370 PF00115 Cytochrome C and Quinol oxidase polypeptide I AQ475_RS11385 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AQ475_RS11385 PF00034 Cytochrome c AQ475_RS11385 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AQ475_RS11390 PF00034 Cytochrome c AQ475_RS11400 PF07730 Histidine kinase AQ475_RS11400 PF05384 Sensor protein DegS AQ475_RS11400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS11420 PF01842 ACT domain AQ475_RS11420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ475_RS11420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AQ475_RS11425 PF02311 AraC-like ligand binding domain AQ475_RS11425 PF12833 Helix-turn-helix domain AQ475_RS11435 PF01321 Creatinase/Prolidase N-terminal domain AQ475_RS11435 PF00557 Metallopeptidase family M24 AQ475_RS11440 PF01527 Transposase AQ475_RS11445 PF13276 HTH-like domain AQ475_RS11445 PF13683 Integrase core domain AQ475_RS11450 PF01527 Transposase AQ475_RS11490 PF00196 Bacterial regulatory proteins, luxR family AQ475_RS11490 PF00072 Response regulator receiver domain AQ475_RS11505 PF18027 Cytosolic carboxypeptidase N-terminal domain AQ475_RS11505 PF00246 Zinc carboxypeptidase AQ475_RS11510 PF03883 Peroxide stress protein YaaA AQ475_RS11520 PF00155 Aminotransferase class I and II AQ475_RS11525 PF02798 Glutathione S-transferase, N-terminal domain AQ475_RS11525 PF14497 Glutathione S-transferase, C-terminal domain AQ475_RS11530 PF00378 Enoyl-CoA hydratase/isomerase AQ475_RS11535 PF00300 Histidine phosphatase superfamily (branch 1) AQ475_RS11545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ475_RS11545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS11545 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS11555 PF01575 MaoC like domain AQ475_RS11560 PF01575 MaoC like domain AQ475_RS11560 PF00171 Aldehyde dehydrogenase family AQ475_RS11565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS11565 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS11565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ475_RS11570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS11570 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS11570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ475_RS11580 PF00293 NUDIX domain AQ475_RS11590 PF00361 Proton-conducting membrane transporter AQ475_RS11595 PF00361 Proton-conducting membrane transporter AQ475_RS11595 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AQ475_RS11600 PF00361 Proton-conducting membrane transporter AQ475_RS11600 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AQ475_RS11605 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AQ475_RS11610 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AQ475_RS11615 PF12838 4Fe-4S dicluster domain AQ475_RS11620 PF00146 NADH dehydrogenase AQ475_RS11625 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AQ475_RS11625 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AQ475_RS11625 PF00384 Molybdopterin oxidoreductase AQ475_RS11630 PF10531 SLBB domain AQ475_RS11630 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AQ475_RS11630 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AQ475_RS11640 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AQ475_RS11645 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AQ475_RS11650 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AQ475_RS11655 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AQ475_RS11665 PF03840 Preprotein translocase SecG subunit AQ475_RS11670 PF00121 Triosephosphate isomerase AQ475_RS11675 PF08240 Alcohol dehydrogenase GroES-like domain AQ475_RS11675 PF00698 Acyl transferase domain AQ475_RS11675 PF14765 Polyketide synthase dehydratase AQ475_RS11675 PF00550 Phosphopantetheine attachment site AQ475_RS11675 PF08659 KR domain AQ475_RS11680 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AQ475_RS11680 PF01138 3' exoribonuclease family, domain 1 AQ475_RS11680 PF00575 S1 RNA binding domain AQ475_RS11680 PF03725 3' exoribonuclease family, domain 2 AQ475_RS11680 PF00013 KH domain AQ475_RS11685 PF00312 Ribosomal protein S15 AQ475_RS11690 PF13458 Periplasmic binding protein AQ475_RS11705 PF00484 Carbonic anhydrase AQ475_RS11710 PF00916 Sulfate permease family AQ475_RS11710 PF01740 STAS domain AQ475_RS11715 PF00682 HMGL-like AQ475_RS11715 PF08502 LeuA allosteric (dimerisation) domain AQ475_RS11720 PF01066 CDP-alcohol phosphatidyltransferase AQ475_RS11725 PF02666 Phosphatidylserine decarboxylase AQ475_RS11730 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AQ475_RS11730 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AQ475_RS11735 PF10369 Small subunit of acetolactate synthase AQ475_RS11740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ475_RS11740 PF00205 Thiamine pyrophosphate enzyme, central domain AQ475_RS11740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ475_RS11770 PF00534 Glycosyl transferases group 1 AQ475_RS11770 PF13439 Glycosyltransferase Family 4 AQ475_RS11775 PF01219 Prokaryotic diacylglycerol kinase AQ475_RS11780 PF08360 QacR-like protein, C-terminal region AQ475_RS11780 PF00440 Bacterial regulatory proteins, tetR family AQ475_RS11785 PF03641 Possible lysine decarboxylase AQ475_RS11795 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AQ475_RS11800 PF07690 Major Facilitator Superfamily AQ475_RS11805 PF01425 Amidase AQ475_RS11815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ475_RS11815 PF01411 tRNA synthetases class II (A) AQ475_RS11815 PF02272 DHHA1 domain AQ475_RS11835 PF00893 Small Multidrug Resistance protein AQ475_RS11845 PF00072 Response regulator receiver domain AQ475_RS11845 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS11850 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS11850 PF02702 Osmosensitive K+ channel His kinase sensor domain AQ475_RS11850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS11850 PF13492 GAF domain AQ475_RS11850 PF13493 Domain of unknown function (DUF4118) AQ475_RS11860 PF02669 K+-transporting ATPase, c chain AQ475_RS11870 PF03814 Potassium-transporting ATPase A subunit AQ475_RS11880 PF08240 Alcohol dehydrogenase GroES-like domain AQ475_RS11880 PF00107 Zinc-binding dehydrogenase AQ475_RS11885 PF02142 MGS-like domain AQ475_RS11900 PF01709 Transcriptional regulator AQ475_RS11905 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AQ475_RS11905 PF02843 Phosphoribosylglycinamide synthetase, C domain AQ475_RS11905 PF02844 Phosphoribosylglycinamide synthetase, N domain AQ475_RS11910 PF01218 Coproporphyrinogen III oxidase AQ475_RS11915 PF01467 Cytidylyltransferase-like AQ475_RS11925 PF02590 Predicted SPOUT methyltransferase AQ475_RS11930 PF02545 Maf-like protein AQ475_RS11935 PF10150 Ribonuclease E/G family AQ475_RS11935 PF00575 S1 RNA binding domain AQ475_RS11940 PF00860 Permease family AQ475_RS11975 PF07690 Major Facilitator Superfamily AQ475_RS11980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS11980 PF03466 LysR substrate binding domain AQ475_RS11985 PF12680 SnoaL-like domain AQ475_RS11985 PF08281 Sigma-70, region 4 AQ475_RS11985 PF04542 Sigma-70 region 2 AQ475_RS11990 PF02627 Carboxymuconolactone decarboxylase family AQ475_RS12000 PF07690 Major Facilitator Superfamily AQ475_RS12015 PF00535 Glycosyl transferase family 2 AQ475_RS12020 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AQ475_RS12025 PF00534 Glycosyl transferases group 1 AQ475_RS12040 PF00534 Glycosyl transferases group 1 AQ475_RS12040 PF13439 Glycosyltransferase Family 4 AQ475_RS12045 PF00005 ABC transporter AQ475_RS12045 PF00664 ABC transporter transmembrane region AQ475_RS12050 PF01336 OB-fold nucleic acid binding domain AQ475_RS12050 PF02811 PHP domain AQ475_RS12050 PF14579 Helix-hairpin-helix motif AQ475_RS12050 PF07733 Bacterial DNA polymerase III alpha NTPase domain AQ475_RS12050 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AQ475_RS12055 PF17773 UPF0176 acylphosphatase like domain AQ475_RS12060 PF00749 tRNA synthetases class I (E and Q), catalytic domain AQ475_RS12065 PF00271 Helicase conserved C-terminal domain AQ475_RS12065 PF00270 DEAD/DEAH box helicase AQ475_RS12070 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AQ475_RS12080 PF01370 NAD dependent epimerase/dehydratase family AQ475_RS12080 PF02222 ATP-grasp domain AQ475_RS12095 PF01580 FtsK/SpoIIIE family AQ475_RS12095 PF09397 Ftsk gamma domain AQ475_RS12095 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AQ475_RS12095 PF17854 FtsK alpha domain AQ475_RS12100 PF10282 Lactonase, 7-bladed beta-propeller AQ475_RS12105 PF00723 Glycosyl hydrolases family 15 AQ475_RS12115 PF00440 Bacterial regulatory proteins, tetR family AQ475_RS12115 PF17938 Tetracyclin repressor-like, C-terminal domain AQ475_RS12120 PF04060 Putative Fe-S cluster AQ475_RS12125 PF00730 HhH-GPD superfamily base excision DNA repair protein AQ475_RS12125 PF00633 Helix-hairpin-helix motif AQ475_RS12125 PF10576 Iron-sulfur binding domain of endonuclease III AQ475_RS12130 PF00892 EamA-like transporter family AQ475_RS12140 PF00034 Cytochrome c AQ475_RS12145 PF00034 Cytochrome c AQ475_RS12150 PF17871 AAA lid domain AQ475_RS12150 PF02861 Clp amino terminal domain, pathogenicity island component AQ475_RS12150 PF00004 ATPase family associated with various cellular activities (AAA) AQ475_RS12150 PF07724 AAA domain (Cdc48 subfamily) AQ475_RS12150 PF10431 C-terminal, D2-small domain, of ClpB protein AQ475_RS12160 PF03594 Benzoate membrane transport protein AQ475_RS12170 PF00923 Transaldolase/Fructose-6-phosphate aldolase AQ475_RS12175 PF06983 3-demethylubiquinone-9 3-methyltransferase AQ475_RS12180 PF00474 Sodium:solute symporter family AQ475_RS12200 PF04345 Chorismate lyase AQ475_RS12205 PF00183 Hsp90 protein AQ475_RS12205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS12210 PF00155 Aminotransferase class I and II AQ475_RS12210 PF00392 Bacterial regulatory proteins, gntR family AQ475_RS12220 PF00892 EamA-like transporter family AQ475_RS12225 PF00155 Aminotransferase class I and II AQ475_RS12235 PF02567 Phenazine biosynthesis-like protein AQ475_RS12240 PF00990 Diguanylate cyclase, GGDEF domain AQ475_RS12240 PF00563 EAL domain AQ475_RS12240 PF03707 Bacterial signalling protein N terminal repeat AQ475_RS12250 PF00850 Histone deacetylase domain AQ475_RS12265 PF03466 LysR substrate binding domain AQ475_RS12265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS12275 PF00521 DNA gyrase/topoisomerase IV, subunit A AQ475_RS12280 PF01751 Toprim domain AQ475_RS12280 PF00204 DNA gyrase B AQ475_RS12280 PF00986 DNA gyrase B subunit, carboxyl terminus AQ475_RS12280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS12285 PF16326 ABC transporter C-terminal domain AQ475_RS12285 PF00005 ABC transporter AQ475_RS12285 PF12848 ABC transporter AQ475_RS12295 PF00301 Rubredoxin AQ475_RS12310 PF00158 Sigma-54 interaction domain AQ475_RS12310 PF00072 Response regulator receiver domain AQ475_RS12310 PF02954 Bacterial regulatory protein, Fis family AQ475_RS12405 PF17482 Phage tail sheath C-terminal domain AQ475_RS12405 PF04984 Phage tail sheath protein subtilisin-like domain AQ475_RS12585 PF13356 Arm DNA-binding domain AQ475_RS12585 PF00589 Phage integrase family AQ475_RS12590 PF01527 Transposase AQ475_RS12595 PF13276 HTH-like domain AQ475_RS12595 PF00665 Integrase core domain AQ475_RS12595 PF13333 Integrase core domain AQ475_RS12600 PF00589 Phage integrase family AQ475_RS12600 PF13356 Arm DNA-binding domain AQ475_RS12610 PF13362 Toprim domain AQ475_RS12610 PF18818 Metallopeptidase superfamily domain AQ475_RS12610 PF08401 Domain of unknown function (DUF1738) AQ475_RS12645 PF05717 IS66 Orf2 like protein AQ475_RS12650 PF13005 zinc-finger binding domain of transposase IS66 AQ475_RS12650 PF13007 Transposase C of IS166 homeodomain AQ475_RS12650 PF03050 Transposase IS66 family AQ475_RS12650 PF13817 IS66 C-terminal element AQ475_RS12655 PF13276 HTH-like domain AQ475_RS12655 PF00665 Integrase core domain AQ475_RS12655 PF13333 Integrase core domain AQ475_RS12660 PF01527 Transposase AQ475_RS12665 PF07929 Plasmid pRiA4b ORF-3-like protein AQ475_RS12685 PF13614 AAA domain AQ475_RS12705 PF00768 D-alanyl-D-alanine carboxypeptidase AQ475_RS12710 PF03974 Ecotin AQ475_RS12730 PF01161 Phosphatidylethanolamine-binding protein AQ475_RS12735 PF07690 Major Facilitator Superfamily AQ475_RS12755 PF00982 Glycosyltransferase family 20 AQ475_RS12775 PF00005 ABC transporter AQ475_RS12780 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS12790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS12790 PF00672 HAMP domain AQ475_RS12790 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS12795 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS12795 PF00072 Response regulator receiver domain AQ475_RS12805 PF17954 Quercetinase C-terminal cupin domain AQ475_RS12805 PF02678 Pirin AQ475_RS12810 PF00497 Bacterial extracellular solute-binding proteins, family 3 AQ475_RS12815 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS12820 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS12825 PF00005 ABC transporter AQ475_RS12835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS12835 PF03466 LysR substrate binding domain AQ475_RS12840 PF13609 Gram-negative porin AQ475_RS12845 PF00543 Nitrogen regulatory protein P-II AQ475_RS12850 PF00795 Carbon-nitrogen hydrolase AQ475_RS12850 PF02540 NAD synthase AQ475_RS12860 PF07690 Major Facilitator Superfamily AQ475_RS12865 PF01541 GIY-YIG catalytic domain AQ475_RS12870 PF00719 Inorganic pyrophosphatase AQ475_RS12875 PF00171 Aldehyde dehydrogenase family AQ475_RS12885 PF07690 Major Facilitator Superfamily AQ475_RS12895 PF02602 Uroporphyrinogen-III synthase HemD AQ475_RS12900 PF03900 Porphobilinogen deaminase, C-terminal domain AQ475_RS12900 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AQ475_RS12905 PF00311 Phosphoenolpyruvate carboxylase AQ475_RS12910 PF08241 Methyltransferase domain AQ475_RS12940 PF00206 Lyase AQ475_RS12940 PF14698 Argininosuccinate lyase C-terminal AQ475_RS12945 PF13419 Haloacid dehalogenase-like hydrolase AQ475_RS12955 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AQ475_RS12955 PF01276 Orn/Lys/Arg decarboxylase, major domain AQ475_RS12955 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AQ475_RS12960 PF00692 dUTPase AQ475_RS12970 PF10609 NUBPL iron-transfer P-loop NTPase AQ475_RS12975 PF00691 OmpA family AQ475_RS12975 PF05736 OprF membrane domain AQ475_RS12980 PF01588 Putative tRNA binding domain AQ475_RS12980 PF09334 tRNA synthetases class I (M) AQ475_RS13000 PF07244 Surface antigen variable number repeat AQ475_RS13000 PF01103 Surface antigen AQ475_RS13000 PF17243 POTRA domain TamA domain 1 AQ475_RS13010 PF02616 Segregation and condensation protein ScpA AQ475_RS13020 PF02569 Pantoate-beta-alanine ligase AQ475_RS13025 PF02261 Aspartate decarboxylase AQ475_RS13030 PF10609 NUBPL iron-transfer P-loop NTPase AQ475_RS13035 PF07681 DoxX AQ475_RS13040 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AQ475_RS13040 PF07685 CobB/CobQ-like glutamine amidotransferase domain AQ475_RS13045 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AQ475_RS13050 PF17113 Regulatory signalling modulator protein AmpE AQ475_RS13050 PF03186 CobD/Cbib protein AQ475_RS13055 PF00155 Aminotransferase class I and II AQ475_RS13060 PF01497 Periplasmic binding protein AQ475_RS13070 PF02654 Cobalamin-5-phosphate synthase AQ475_RS13075 PF02277 Phosphoribosyltransferase AQ475_RS13080 PF00005 ABC transporter AQ475_RS13085 PF01032 FecCD transport family AQ475_RS13090 PF07715 TonB-dependent Receptor Plug Domain AQ475_RS13090 PF00593 TonB dependent receptor AQ475_RS13100 PF05164 Cell division protein ZapA AQ475_RS13120 PF01790 Prolipoprotein diacylglyceryl transferase AQ475_RS13125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS13125 PF03466 LysR substrate binding domain AQ475_RS13130 PF00920 Dehydratase family AQ475_RS13135 PF00034 Cytochrome c AQ475_RS13145 PF04364 DNA polymerase III chi subunit, HolC AQ475_RS13150 PF02789 Cytosol aminopeptidase family, N-terminal domain AQ475_RS13150 PF00883 Cytosol aminopeptidase family, catalytic domain AQ475_RS13155 PF03739 Lipopolysaccharide export system permease LptF/LptG AQ475_RS13170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AQ475_RS13170 PF14824 Sirohaem biosynthesis protein central AQ475_RS13170 PF10414 Sirohaem synthase dimerisation region AQ475_RS13175 PF00009 Elongation factor Tu GTP binding domain AQ475_RS13180 PF01507 Phosphoadenosine phosphosulfate reductase family AQ475_RS13185 PF01507 Phosphoadenosine phosphosulfate reductase family AQ475_RS13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS13200 PF03466 LysR substrate binding domain AQ475_RS13230 PF00665 Integrase core domain AQ475_RS13230 PF01527 Transposase AQ475_RS13230 PF13276 HTH-like domain AQ475_RS13235 PF01527 Transposase AQ475_RS13240 PF01527 Transposase AQ475_RS13245 PF00665 Integrase core domain AQ475_RS13245 PF13333 Integrase core domain AQ475_RS13245 PF13276 HTH-like domain AQ475_RS13255 PF02384 N-6 DNA Methylase AQ475_RS13280 PF01381 Helix-turn-helix AQ475_RS13280 PF08671 Anti-repressor SinI AQ475_RS13285 PF00596 Class II Aldolase and Adducin N-terminal domain AQ475_RS13290 PF00701 Dihydrodipicolinate synthetase family AQ475_RS13295 PF03473 MOSC domain AQ475_RS13295 PF03475 3-alpha domain AQ475_RS13300 PF00561 alpha/beta hydrolase fold AQ475_RS13305 PF03466 LysR substrate binding domain AQ475_RS13305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS13310 PF03466 LysR substrate binding domain AQ475_RS13310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS13330 PF01479 S4 domain AQ475_RS13330 PF00849 RNA pseudouridylate synthase AQ475_RS13345 PF00111 2Fe-2S iron-sulfur cluster binding domain AQ475_RS13345 PF00970 Oxidoreductase FAD-binding domain AQ475_RS13345 PF00175 Oxidoreductase NAD-binding domain AQ475_RS13350 PF00202 Aminotransferase class-III AQ475_RS13355 PF00583 Acetyltransferase (GNAT) family AQ475_RS13365 PF00005 ABC transporter AQ475_RS13370 PF12399 Branched-chain amino acid ATP-binding cassette transporter AQ475_RS13370 PF00005 ABC transporter AQ475_RS13375 PF11862 Domain of unknown function (DUF3382) AQ475_RS13375 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS13380 PF02653 Branched-chain amino acid transport system / permease component AQ475_RS13390 PF02401 LytB protein AQ475_RS13395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AQ475_RS13400 PF04002 RadC-like JAB domain AQ475_RS13405 PF00830 Ribosomal L28 family AQ475_RS13410 PF00471 Ribosomal protein L33 AQ475_RS13415 PF00890 FAD binding domain AQ475_RS13415 PF02910 Fumarate reductase flavoprotein C-term AQ475_RS13420 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AQ475_RS13420 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AQ475_RS13425 PF02445 Quinolinate synthetase A protein AQ475_RS13435 PF00924 Mechanosensitive ion channel AQ475_RS13435 PF12795 Mechanosensitive ion channel porin domain AQ475_RS13435 PF12794 Mechanosensitive ion channel inner membrane domain 1 AQ475_RS13440 PF01189 16S rRNA methyltransferase RsmB/F AQ475_RS13440 PF01029 NusB family AQ475_RS13445 PF00551 Formyl transferase AQ475_RS13450 PF01687 Riboflavin kinase AQ475_RS13450 PF06574 FAD synthetase AQ475_RS13455 PF08264 Anticodon-binding domain of tRNA AQ475_RS13455 PF00133 tRNA synthetases class I (I, L, M and V) AQ475_RS13455 PF06827 Zinc finger found in FPG and IleRS AQ475_RS13460 PF01252 Signal peptidase (SPase) II AQ475_RS13465 PF02441 Flavoprotein AQ475_RS13465 PF04127 DNA / pantothenate metabolism flavoprotein AQ475_RS13470 PF00692 dUTPase AQ475_RS13485 PF00324 Amino acid permease AQ475_RS13490 PF10431 C-terminal, D2-small domain, of ClpB protein AQ475_RS13490 PF00004 ATPase family associated with various cellular activities (AAA) AQ475_RS13490 PF07724 AAA domain (Cdc48 subfamily) AQ475_RS13490 PF17871 AAA lid domain AQ475_RS13490 PF02861 Clp amino terminal domain, pathogenicity island component AQ475_RS13495 PF02617 ATP-dependent Clp protease adaptor protein ClpS AQ475_RS13500 PF00313 'Cold-shock' DNA-binding domain AQ475_RS13505 PF07732 Multicopper oxidase AQ475_RS13505 PF07731 Multicopper oxidase AQ475_RS13510 PF00180 Isocitrate/isopropylmalate dehydrogenase AQ475_RS13515 PF00849 RNA pseudouridylate synthase AQ475_RS13525 PF14492 Elongation Factor G, domain II AQ475_RS13525 PF00679 Elongation factor G C-terminus AQ475_RS13525 PF03144 Elongation factor Tu domain 2 AQ475_RS13525 PF00009 Elongation factor Tu GTP binding domain AQ475_RS13525 PF03764 Elongation factor G, domain IV AQ475_RS13530 PF00248 Aldo/keto reductase family AQ475_RS13535 PF00392 Bacterial regulatory proteins, gntR family AQ475_RS13535 PF07702 UTRA domain AQ475_RS13545 PF00285 Citrate synthase, C-terminal domain AQ475_RS13550 PF07690 Major Facilitator Superfamily AQ475_RS13600 PF01610 Transposase AQ475_RS13600 PF13542 Helix-turn-helix domain of transposase family ISL3 AQ475_RS13600 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 AQ475_RS13605 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AQ475_RS13605 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AQ475_RS13610 PF02601 Exonuclease VII, large subunit AQ475_RS13610 PF13742 OB-fold nucleic acid binding domain AQ475_RS13615 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AQ475_RS13620 PF03966 Trm112p-like protein AQ475_RS13625 PF02348 Cytidylyltransferase AQ475_RS13630 PF05191 Adenylate kinase, active site lid AQ475_RS13635 PF00106 short chain dehydrogenase AQ475_RS13640 PF13369 Transglutaminase-like superfamily AQ475_RS13645 PF03023 Lipid II flippase MurJ AQ475_RS13650 PF01649 Ribosomal protein S20 AQ475_RS13660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AQ475_RS13660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AQ475_RS13665 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AQ475_RS13665 PF01565 FAD binding domain AQ475_RS13670 PF04461 Protein of unknown function (DUF520) AQ475_RS13675 PF02660 Glycerol-3-phosphate acyltransferase AQ475_RS13680 PF04073 Aminoacyl-tRNA editing domain AQ475_RS13685 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS13685 PF00501 AMP-binding enzyme AQ475_RS13690 PF00589 Phage integrase family AQ475_RS13690 PF02899 Phage integrase, N-terminal SAM-like domain AQ475_RS13700 PF08331 Domain of unknown function (DUF1730) AQ475_RS13705 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AQ475_RS13710 PF11741 AMIN domain AQ475_RS13710 PF01520 N-acetylmuramoyl-L-alanine amidase AQ475_RS13715 PF00892 EamA-like transporter family AQ475_RS13720 PF02678 Pirin AQ475_RS13720 PF05726 Pirin C-terminal cupin domain AQ475_RS13725 PF00085 Thioredoxin AQ475_RS13730 PF00899 ThiF family AQ475_RS13735 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AQ475_RS13735 PF01243 Pyridoxamine 5'-phosphate oxidase AQ475_RS13750 PF01625 Peptide methionine sulfoxide reductase AQ475_RS13760 PF01613 Flavin reductase like domain AQ475_RS13765 PF01037 Lrp/AsnC ligand binding domain AQ475_RS13770 PF04199 Putative cyclase AQ475_RS13775 PF00266 Aminotransferase class-V AQ475_RS13780 PF03301 Tryptophan 2,3-dioxygenase AQ475_RS13785 PF07690 Major Facilitator Superfamily AQ475_RS13805 PF00171 Aldehyde dehydrogenase family AQ475_RS13810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AQ475_RS13810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AQ475_RS13810 PF00205 Thiamine pyrophosphate enzyme, central domain AQ475_RS13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS13815 PF03466 LysR substrate binding domain AQ475_RS13820 PF08125 Mannitol dehydrogenase C-terminal domain AQ475_RS13820 PF01232 Mannitol dehydrogenase Rossmann domain AQ475_RS13825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ475_RS13825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ475_RS13830 PF04198 Putative sugar-binding domain AQ475_RS13835 PF07690 Major Facilitator Superfamily AQ475_RS13840 PF00144 Beta-lactamase AQ475_RS13845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS13845 PF03466 LysR substrate binding domain AQ475_RS13855 PF00005 ABC transporter AQ475_RS13855 PF08402 TOBE domain AQ475_RS13860 PF13419 Haloacid dehalogenase-like hydrolase AQ475_RS13865 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS13870 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS13880 PF08013 Tagatose 6 phosphate kinase AQ475_RS13885 PF00294 pfkB family carbohydrate kinase AQ475_RS13895 PF01475 Ferric uptake regulator family AQ475_RS13905 PF00005 ABC transporter AQ475_RS13910 PF00950 ABC 3 transport family AQ475_RS13915 PF00756 Putative esterase AQ475_RS13920 PF08240 Alcohol dehydrogenase GroES-like domain AQ475_RS13920 PF00107 Zinc-binding dehydrogenase AQ475_RS13925 PF12833 Helix-turn-helix domain AQ475_RS13925 PF01965 DJ-1/PfpI family AQ475_RS13930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ475_RS13930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ475_RS13935 PF00860 Permease family AQ475_RS13940 PF02321 Outer membrane efflux protein AQ475_RS13945 PF00873 AcrB/AcrD/AcrF family AQ475_RS13950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AQ475_RS13950 PF00529 HlyD membrane-fusion protein of T1SS AQ475_RS13955 PF00440 Bacterial regulatory proteins, tetR family AQ475_RS13955 PF08361 MAATS-type transcriptional repressor, C-terminal region AQ475_RS13975 PF13180 PDZ domain AQ475_RS13980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS13980 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS13985 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS13985 PF00072 Response regulator receiver domain AQ475_RS13990 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AQ475_RS13995 PF04116 Fatty acid hydroxylase superfamily AQ475_RS14005 PF01300 Telomere recombination AQ475_RS14005 PF03481 Putative GTP-binding controlling metal-binding AQ475_RS14010 PF02222 ATP-grasp domain AQ475_RS14010 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AQ475_RS14015 PF00731 AIR carboxylase AQ475_RS14020 PF01259 SAICAR synthetase AQ475_RS14025 PF01116 Fructose-bisphosphate aldolase class-II AQ475_RS14030 PF00224 Pyruvate kinase, barrel domain AQ475_RS14030 PF02887 Pyruvate kinase, alpha/beta domain AQ475_RS14035 PF00162 Phosphoglycerate kinase AQ475_RS14050 PF01063 Amino-transferase class IV AQ475_RS14060 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AQ475_RS14070 PF00561 alpha/beta hydrolase fold AQ475_RS14080 PF01435 Peptidase family M48 AQ475_RS14080 PF13181 Tetratricopeptide repeat AQ475_RS14085 PF01967 MoaC family AQ475_RS14100 PF15864 Protein glycosylation ligase AQ475_RS14100 PF04932 O-Antigen ligase AQ475_RS14100 PF11846 Virulence factor membrane-bound polymerase, C-terminal AQ475_RS14105 PF00114 Pilin (bacterial filament) AQ475_RS14105 PF07963 Prokaryotic N-terminal methylation motif AQ475_RS14110 PF03741 Integral membrane protein TerC family AQ475_RS14115 PF02629 CoA binding domain AQ475_RS14115 PF00549 CoA-ligase AQ475_RS14120 PF08442 ATP-grasp domain AQ475_RS14120 PF00549 CoA-ligase AQ475_RS14135 PF00154 recA bacterial DNA recombination protein AQ475_RS14140 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS14140 PF00072 Response regulator receiver domain AQ475_RS14145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS14145 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS14150 PF08946 Osmosensory transporter coiled coil AQ475_RS14150 PF00083 Sugar (and other) transporter AQ475_RS14180 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS14180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS14180 PF00072 Response regulator receiver domain AQ475_RS14180 PF09308 LuxQ, periplasmic AQ475_RS14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS14185 PF03466 LysR substrate binding domain AQ475_RS14190 PF01804 Penicillin amidase AQ475_RS14210 PF00156 Phosphoribosyl transferase domain AQ475_RS14210 PF05139 Erythromycin esterase AQ475_RS14215 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AQ475_RS14215 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AQ475_RS14220 PF00156 Phosphoribosyl transferase domain AQ475_RS14220 PF01738 Dienelactone hydrolase family AQ475_RS14225 PF05139 Erythromycin esterase AQ475_RS14225 PF00156 Phosphoribosyl transferase domain AQ475_RS14235 PF00005 ABC transporter AQ475_RS14250 PF00581 Rhodanese-like domain AQ475_RS14265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ475_RS14265 PF08447 PAS fold AQ475_RS14275 PF02954 Bacterial regulatory protein, Fis family AQ475_RS14275 PF00072 Response regulator receiver domain AQ475_RS14275 PF00158 Sigma-54 interaction domain AQ475_RS14280 PF03707 Bacterial signalling protein N terminal repeat AQ475_RS14280 PF00563 EAL domain AQ475_RS14280 PF00990 Diguanylate cyclase, GGDEF domain AQ475_RS14285 PF00149 Calcineurin-like phosphoesterase AQ475_RS14285 PF16656 Purple acid Phosphatase, N-terminal domain AQ475_RS14295 PF13378 Enolase C-terminal domain-like AQ475_RS14295 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AQ475_RS14315 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AQ475_RS14315 PF00034 Cytochrome c AQ475_RS14320 PF00270 DEAD/DEAH box helicase AQ475_RS14320 PF00271 Helicase conserved C-terminal domain AQ475_RS14340 PF08220 DeoR-like helix-turn-helix domain AQ475_RS14340 PF00455 DeoR C terminal sensor domain AQ475_RS14355 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AQ475_RS14355 PF01266 FAD dependent oxidoreductase AQ475_RS14360 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AQ475_RS14360 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AQ475_RS14365 PF00230 Major intrinsic protein AQ475_RS14375 PF13419 Haloacid dehalogenase-like hydrolase AQ475_RS14380 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AQ475_RS14390 PF07690 Major Facilitator Superfamily AQ475_RS14395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS14395 PF03466 LysR substrate binding domain AQ475_RS14400 PF00919 Uncharacterized protein family UPF0004 AQ475_RS14400 PF04055 Radical SAM superfamily AQ475_RS14400 PF01938 TRAM domain AQ475_RS14405 PF02562 PhoH-like protein AQ475_RS14410 PF02130 Uncharacterized protein family UPF0054 AQ475_RS14415 PF04752 ChaC-like protein AQ475_RS14420 PF03471 Transporter associated domain AQ475_RS14420 PF00571 CBS domain AQ475_RS14425 PF00795 Carbon-nitrogen hydrolase AQ475_RS14430 PF02091 Glycyl-tRNA synthetase alpha subunit AQ475_RS14435 PF05746 DALR anticodon binding domain AQ475_RS14435 PF02092 Glycyl-tRNA synthetase beta subunit AQ475_RS14445 PF01553 Acyltransferase AQ475_RS14455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AQ475_RS14465 PF00398 Ribosomal RNA adenine dimethylase AQ475_RS14470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AQ475_RS14475 PF09312 SurA N-terminal domain AQ475_RS14480 PF04453 LPS transport system D AQ475_RS14485 PF01636 Phosphotransferase enzyme family AQ475_RS14490 PF00483 Nucleotidyl transferase AQ475_RS14495 PF00005 ABC transporter AQ475_RS14495 PF00664 ABC transporter transmembrane region AQ475_RS14500 PF03061 Thioesterase superfamily AQ475_RS14510 PF02634 FdhD/NarQ family AQ475_RS14515 PF00378 Enoyl-CoA hydratase/isomerase AQ475_RS14520 PF00108 Thiolase, N-terminal domain AQ475_RS14520 PF02803 Thiolase, C-terminal domain AQ475_RS14525 PF00378 Enoyl-CoA hydratase/isomerase AQ475_RS14525 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AQ475_RS14525 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AQ475_RS14530 PF12806 Acetyl-CoA dehydrogenase C-terminal like AQ475_RS14530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ475_RS14530 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS14530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS14540 PF13091 PLD-like domain AQ475_RS14545 PF00293 NUDIX domain AQ475_RS14550 PF02938 GAD domain AQ475_RS14550 PF00152 tRNA synthetases class II (D, K and N) AQ475_RS14550 PF01336 OB-fold nucleic acid binding domain AQ475_RS14570 PF03109 ABC1 family AQ475_RS14585 PF01209 ubiE/COQ5 methyltransferase family AQ475_RS14605 PF00291 Pyridoxal-phosphate dependent enzyme AQ475_RS14605 PF00585 C-terminal regulatory domain of Threonine dehydratase AQ475_RS14610 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AQ475_RS14610 PF14489 QueF-like protein AQ475_RS14615 PF01042 Endoribonuclease L-PSP AQ475_RS14620 PF07969 Amidohydrolase family AQ475_RS14625 PF01418 Helix-turn-helix domain, rpiR family AQ475_RS14625 PF01380 SIS domain AQ475_RS14645 PF07690 Major Facilitator Superfamily AQ475_RS14655 PF07859 alpha/beta hydrolase fold AQ475_RS14665 PF00534 Glycosyl transferases group 1 AQ475_RS14665 PF13439 Glycosyltransferase Family 4 AQ475_RS14670 PF02563 Polysaccharide biosynthesis/export protein AQ475_RS14670 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AQ475_RS14670 PF10531 SLBB domain AQ475_RS14675 PF02397 Bacterial sugar transferase AQ475_RS14690 PF00550 Phosphopantetheine attachment site AQ475_RS14720 PF00158 Sigma-54 interaction domain AQ475_RS14720 PF00072 Response regulator receiver domain AQ475_RS14720 PF02954 Bacterial regulatory protein, Fis family AQ475_RS14730 PF00534 Glycosyl transferases group 1 AQ475_RS14730 PF13439 Glycosyltransferase Family 4 AQ475_RS14740 PF01050 Mannose-6-phosphate isomerase AQ475_RS14740 PF00483 Nucleotidyl transferase AQ475_RS14755 PF08448 PAS fold AQ475_RS14755 PF00990 Diguanylate cyclase, GGDEF domain AQ475_RS14755 PF00563 EAL domain AQ475_RS14760 PF00596 Class II Aldolase and Adducin N-terminal domain AQ475_RS14780 PF00069 Protein kinase domain AQ475_RS14820 PF02627 Carboxymuconolactone decarboxylase family AQ475_RS14825 PF01527 Transposase AQ475_RS14830 PF13276 HTH-like domain AQ475_RS14830 PF00665 Integrase core domain AQ475_RS14830 PF13333 Integrase core domain AQ475_RS14855 PF01738 Dienelactone hydrolase family AQ475_RS14865 PF12728 Helix-turn-helix domain AQ475_RS14865 PF02661 Fic/DOC family AQ475_RS14890 PF07929 Plasmid pRiA4b ORF-3-like protein AQ475_RS14895 PF01527 Transposase AQ475_RS14900 PF00665 Integrase core domain AQ475_RS14900 PF13333 Integrase core domain AQ475_RS14900 PF13276 HTH-like domain AQ475_RS14905 PF03050 Transposase IS66 family AQ475_RS14905 PF13817 IS66 C-terminal element AQ475_RS14905 PF13007 Transposase C of IS166 homeodomain AQ475_RS14905 PF13005 zinc-finger binding domain of transposase IS66 AQ475_RS14910 PF05717 IS66 Orf2 like protein AQ475_RS14935 PF00580 UvrD/REP helicase N-terminal domain AQ475_RS14935 PF13361 UvrD-like helicase C-terminal domain AQ475_RS14945 PF01381 Helix-turn-helix AQ475_RS14975 PF00436 Single-strand binding protein family AQ475_RS14980 PF07690 Major Facilitator Superfamily AQ475_RS14985 PF17760 UvrA interaction domain AQ475_RS14985 PF17755 UvrA DNA-binding domain AQ475_RS14995 PF00551 Formyl transferase AQ475_RS15005 PF01810 LysE type translocator AQ475_RS15010 PF00156 Phosphoribosyl transferase domain AQ475_RS15015 PF00999 Sodium/hydrogen exchanger family AQ475_RS15015 PF02080 TrkA-C domain AQ475_RS15015 PF02254 TrkA-N domain AQ475_RS15020 PF00571 CBS domain AQ475_RS15020 PF01380 SIS domain AQ475_RS15040 PF00005 ABC transporter AQ475_RS15045 PF00309 Sigma-54 factor, Activator interacting domain (AID) AQ475_RS15045 PF04552 Sigma-54, DNA binding domain AQ475_RS15045 PF04963 Sigma-54 factor, core binding domain AQ475_RS15050 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AQ475_RS15055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AQ475_RS15060 PF02603 HPr Serine kinase N terminus AQ475_RS15060 PF07475 HPr Serine kinase C-terminal domain AQ475_RS15065 PF03668 P-loop ATPase protein family AQ475_RS15075 PF14815 NUDIX domain AQ475_RS15075 PF00633 Helix-hairpin-helix motif AQ475_RS15075 PF10576 Iron-sulfur binding domain of endonuclease III AQ475_RS15075 PF00730 HhH-GPD superfamily base excision DNA repair protein AQ475_RS15080 PF06827 Zinc finger found in FPG and IleRS AQ475_RS15080 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AQ475_RS15080 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AQ475_RS15095 PF08544 GHMP kinases C terminal AQ475_RS15095 PF00288 GHMP kinases N terminal domain AQ475_RS15105 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AQ475_RS15105 PF14572 Phosphoribosyl synthetase-associated domain AQ475_RS15110 PF14693 Ribosomal protein TL5, C-terminal domain AQ475_RS15110 PF01386 Ribosomal L25p family AQ475_RS15115 PF01195 Peptidyl-tRNA hydrolase AQ475_RS15120 PF00155 Aminotransferase class I and II AQ475_RS15125 PF00037 4Fe-4S binding domain AQ475_RS15130 PF01467 Cytidylyltransferase-like AQ475_RS15145 PF02881 SRP54-type protein, helical bundle domain AQ475_RS15145 PF00448 SRP54-type protein, GTPase domain AQ475_RS15150 PF14497 Glutathione S-transferase, C-terminal domain AQ475_RS15150 PF02798 Glutathione S-transferase, N-terminal domain AQ475_RS15155 PF04324 BFD-like [2Fe-2S] binding domain AQ475_RS15155 PF18267 Rubredoxin NAD+ reductase C-terminal domain AQ475_RS15155 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ475_RS15155 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AQ475_RS15155 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AQ475_RS15160 PF00355 Rieske [2Fe-2S] domain AQ475_RS15165 PF01568 Molydopterin dinucleotide binding domain AQ475_RS15165 PF00384 Molybdopterin oxidoreductase AQ475_RS15165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AQ475_RS15170 PF02885 Glycosyl transferase family, helical bundle domain AQ475_RS15185 PF00682 HMGL-like AQ475_RS15185 PF08502 LeuA allosteric (dimerisation) domain AQ475_RS15195 PF09411 Lipid A 3-O-deacylase (PagL) AQ475_RS15200 PF04542 Sigma-70 region 2 AQ475_RS15200 PF04545 Sigma-70, region 4 AQ475_RS15200 PF00140 Sigma-70 factor, region 1.2 AQ475_RS15210 PF01654 Cytochrome bd terminal oxidase subunit I AQ475_RS15215 PF02322 Cytochrome bd terminal oxidase subunit II AQ475_RS15220 PF08173 Membrane bound YbgT-like protein AQ475_RS15235 PF03173 Putative carbohydrate binding domain AQ475_RS15235 PF00728 Glycosyl hydrolase family 20, catalytic domain AQ475_RS15235 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AQ475_RS15235 PF02838 Glycosyl hydrolase family 20, domain 2 AQ475_RS15245 PF02378 Phosphotransferase system, EIIC AQ475_RS15245 PF00367 phosphotransferase system, EIIB AQ475_RS15245 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AQ475_RS15255 PF01380 SIS domain AQ475_RS15260 PF01979 Amidohydrolase family AQ475_RS15265 PF07702 UTRA domain AQ475_RS15265 PF00392 Bacterial regulatory proteins, gntR family AQ475_RS15270 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AQ475_RS15270 PF02811 PHP domain AQ475_RS15270 PF14579 Helix-hairpin-helix motif AQ475_RS15270 PF07733 Bacterial DNA polymerase III alpha NTPase domain AQ475_RS15280 PF03846 Cell division inhibitor SulA AQ475_RS15285 PF00005 ABC transporter AQ475_RS15300 PF03180 NLPA lipoprotein AQ475_RS15305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ475_RS15305 PF00672 HAMP domain AQ475_RS15305 PF02203 Tar ligand binding domain homologue AQ475_RS15315 PF02630 SCO1/SenC AQ475_RS15320 PF01040 UbiA prenyltransferase family AQ475_RS15325 PF02628 Cytochrome oxidase assembly protein AQ475_RS15345 PF00510 Cytochrome c oxidase subunit III AQ475_RS15355 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AQ475_RS15365 PF00115 Cytochrome C and Quinol oxidase polypeptide I AQ475_RS15370 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AQ475_RS15370 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AQ475_RS15380 PF08241 Methyltransferase domain AQ475_RS15385 PF00156 Phosphoribosyl transferase domain AQ475_RS15390 PF00588 SpoU rRNA Methylase family AQ475_RS15395 PF01661 Macro domain AQ475_RS15400 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AQ475_RS15400 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AQ475_RS15405 PF02556 Preprotein translocase subunit SecB AQ475_RS15410 PF00462 Glutaredoxin AQ475_RS15415 PF00581 Rhodanese-like domain AQ475_RS15420 PF00300 Histidine phosphatase superfamily (branch 1) AQ475_RS15425 PF03572 Peptidase family S41 AQ475_RS15425 PF13180 PDZ domain AQ475_RS15430 PF00899 ThiF family AQ475_RS15435 PF00391 PEP-utilising enzyme, mobile domain AQ475_RS15435 PF02896 PEP-utilising enzyme, TIM barrel domain AQ475_RS15435 PF05524 PEP-utilising enzyme, N-terminal AQ475_RS15440 PF00381 PTS HPr component phosphorylation site AQ475_RS15450 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AQ475_RS15450 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AQ475_RS15460 PF00909 Ammonium Transporter Family AQ475_RS15465 PF00543 Nitrogen regulatory protein P-II AQ475_RS15470 PF04380 Membrane fusogenic activity AQ475_RS15475 PF13335 Magnesium chelatase, subunit ChlI C-terminal AQ475_RS15475 PF01078 Magnesium chelatase, subunit ChlI AQ475_RS15485 PF00501 AMP-binding enzyme AQ475_RS15485 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS15485 PF00668 Condensation domain AQ475_RS15485 PF00550 Phosphopantetheine attachment site AQ475_RS15485 PF00975 Thioesterase domain AQ475_RS15495 PF00578 AhpC/TSA family AQ475_RS15500 PF00158 Sigma-54 interaction domain AQ475_RS15500 PF02954 Bacterial regulatory protein, Fis family AQ475_RS15500 PF00072 Response regulator receiver domain AQ475_RS15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS15505 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS15505 PF02743 Cache domain AQ475_RS15510 PF00375 Sodium:dicarboxylate symporter family AQ475_RS15515 PF00474 Sodium:solute symporter family AQ475_RS15525 PF02515 CoA-transferase family III AQ475_RS15530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ475_RS15530 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS15530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS15535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS15535 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS15535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AQ475_RS15540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AQ475_RS15540 PF00378 Enoyl-CoA hydratase/isomerase AQ475_RS15540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AQ475_RS15545 PF03466 LysR substrate binding domain AQ475_RS15545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS15560 PF03466 LysR substrate binding domain AQ475_RS15560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS15565 PF08240 Alcohol dehydrogenase GroES-like domain AQ475_RS15565 PF08659 KR domain AQ475_RS15565 PF14765 Polyketide synthase dehydratase AQ475_RS15565 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ475_RS15565 PF00107 Zinc-binding dehydrogenase AQ475_RS15565 PF00550 Phosphopantetheine attachment site AQ475_RS15565 PF16197 Ketoacyl-synthetase C-terminal extension AQ475_RS15565 PF00698 Acyl transferase domain AQ475_RS15565 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ475_RS15570 PF04055 Radical SAM superfamily AQ475_RS15570 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AQ475_RS15575 PF03099 Biotin/lipoate A/B protein ligase family AQ475_RS15585 PF03466 LysR substrate binding domain AQ475_RS15585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS15590 PF04359 Protein of unknown function (DUF493) AQ475_RS15595 PF01063 Amino-transferase class IV AQ475_RS15600 PF07943 Penicillin-binding protein 5, C-terminal domain AQ475_RS15600 PF00768 D-alanyl-D-alanine carboxypeptidase AQ475_RS15630 PF00005 ABC transporter AQ475_RS15635 PF02405 Permease MlaE AQ475_RS15640 PF02872 5'-nucleotidase, C-terminal domain AQ475_RS15640 PF00149 Calcineurin-like phosphoesterase AQ475_RS15650 PF02237 Biotin protein ligase C terminal domain AQ475_RS15650 PF03099 Biotin/lipoate A/B protein ligase family AQ475_RS15655 PF03309 Type III pantothenate kinase AQ475_RS15665 PF01467 Cytidylyltransferase-like AQ475_RS15685 PF00378 Enoyl-CoA hydratase/isomerase AQ475_RS15705 PF12091 Protein of unknown function (DUF3567) AQ475_RS15710 PF02607 B12 binding domain AQ475_RS15710 PF02574 Homocysteine S-methyltransferase AQ475_RS15710 PF02965 Vitamin B12 dependent methionine synthase, activation domain AQ475_RS15710 PF02310 B12 binding domain AQ475_RS15710 PF00809 Pterin binding enzyme AQ475_RS15715 PF02607 B12 binding domain AQ475_RS15715 PF02965 Vitamin B12 dependent methionine synthase, activation domain AQ475_RS15715 PF00809 Pterin binding enzyme AQ475_RS15715 PF02310 B12 binding domain AQ475_RS15715 PF02574 Homocysteine S-methyltransferase AQ475_RS15725 PF03485 Arginyl tRNA synthetase N terminal domain AQ475_RS15725 PF00750 tRNA synthetases class I (R) AQ475_RS15725 PF05746 DALR anticodon binding domain AQ475_RS15735 PF13462 Thioredoxin AQ475_RS15740 PF00106 short chain dehydrogenase AQ475_RS15760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ475_RS15765 PF00005 ABC transporter AQ475_RS15765 PF16326 ABC transporter C-terminal domain AQ475_RS15765 PF12848 ABC transporter AQ475_RS15775 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AQ475_RS15780 PF00484 Carbonic anhydrase AQ475_RS15785 PF02803 Thiolase, C-terminal domain AQ475_RS15785 PF00108 Thiolase, N-terminal domain AQ475_RS15805 PF00202 Aminotransferase class-III AQ475_RS15810 PF00155 Aminotransferase class I and II AQ475_RS15820 PF04055 Radical SAM superfamily AQ475_RS15820 PF06968 Biotin and Thiamin Synthesis associated domain AQ475_RS15825 PF03932 CutC family AQ475_RS15835 PF00245 Alkaline phosphatase AQ475_RS15840 PF00245 Alkaline phosphatase AQ475_RS15850 PF00563 EAL domain AQ475_RS15850 PF05231 MASE1 AQ475_RS15855 PF00999 Sodium/hydrogen exchanger family AQ475_RS15870 PF07885 Ion channel AQ475_RS15870 PF17655 Inward rectifier potassium channel C-terminal domain AQ475_RS15960 PF13356 Arm DNA-binding domain AQ475_RS15960 PF00589 Phage integrase family AQ475_RS15965 PF00701 Dihydrodipicolinate synthetase family AQ475_RS15970 PF12697 Alpha/beta hydrolase family AQ475_RS15985 PF01037 Lrp/AsnC ligand binding domain AQ475_RS15995 PF04185 Phosphoesterase family AQ475_RS15995 PF05506 Domain of unknown function (DUF756) AQ475_RS16010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ475_RS16015 PF00682 HMGL-like AQ475_RS16035 PF13404 AsnC-type helix-turn-helix domain AQ475_RS16035 PF01037 Lrp/AsnC ligand binding domain AQ475_RS16040 PF00561 alpha/beta hydrolase fold AQ475_RS16050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS16050 PF03466 LysR substrate binding domain AQ475_RS16055 PF13609 Gram-negative porin AQ475_RS16070 PF13593 SBF-like CPA transporter family (DUF4137) AQ475_RS16075 PF00672 HAMP domain AQ475_RS16075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AQ475_RS16075 PF02203 Tar ligand binding domain homologue AQ475_RS16080 PF00356 Bacterial regulatory proteins, lacI family AQ475_RS16090 PF00294 pfkB family carbohydrate kinase AQ475_RS16120 PF01171 PP-loop family AQ475_RS16125 PF00132 Bacterial transferase hexapeptide (six repeats) AQ475_RS16125 PF12804 MobA-like NTP transferase domain AQ475_RS16130 PF01380 SIS domain AQ475_RS16145 PF04536 TPM domain AQ475_RS16150 PF04011 LemA family AQ475_RS16190 PF00764 Arginosuccinate synthase AQ475_RS16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS16205 PF03466 LysR substrate binding domain AQ475_RS16210 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS16210 PF00072 Response regulator receiver domain AQ475_RS16215 PF00873 AcrB/AcrD/AcrF family AQ475_RS16225 PF02321 Outer membrane efflux protein AQ475_RS16230 PF13609 Gram-negative porin AQ475_RS16240 PF13609 Gram-negative porin AQ475_RS16245 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS16245 PF00072 Response regulator receiver domain AQ475_RS16250 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS16250 PF00672 HAMP domain AQ475_RS16250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS16255 PF00486 Transcriptional regulatory protein, C terminal AQ475_RS16255 PF00072 Response regulator receiver domain AQ475_RS16270 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AQ475_RS16270 PF07992 Pyridine nucleotide-disulphide oxidoreductase AQ475_RS16320 PF13609 Gram-negative porin AQ475_RS16330 PF03831 PhnA domain AQ475_RS16330 PF08274 PhnA Zinc-Ribbon AQ475_RS16350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS16350 PF03466 LysR substrate binding domain AQ475_RS16355 PF00860 Permease family AQ475_RS16360 PF00669 Bacterial flagellin N-terminal helical region AQ475_RS16365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ475_RS16365 PF00460 Flagella basal body rod protein AQ475_RS16370 PF07317 Flagellar regulator YcgR AQ475_RS16370 PF07238 PilZ domain AQ475_RS16375 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AQ475_RS16375 PF10135 Rod binding protein AQ475_RS16380 PF02119 Flagellar P-ring protein AQ475_RS16385 PF02107 Flagellar L-ring protein AQ475_RS16390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ475_RS16390 PF00460 Flagella basal body rod protein AQ475_RS16395 PF00460 Flagella basal body rod protein AQ475_RS16395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ475_RS16400 PF00460 Flagella basal body rod protein AQ475_RS16400 PF07559 Flagellar basal body protein FlaE AQ475_RS16400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ475_RS16405 PF03963 Flagellar hook capping protein - N-terminal region AQ475_RS16405 PF13861 FlgD Tudor-like domain AQ475_RS16405 PF13860 FlgD Ig-like domain AQ475_RS16410 PF00460 Flagella basal body rod protein AQ475_RS16410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AQ475_RS16415 PF00460 Flagella basal body rod protein AQ475_RS16420 PF17656 FlgA N-terminal domain AQ475_RS16420 PF13144 Chaperone for flagella basal body P-ring formation AQ475_RS16425 PF04316 Anti-sigma-28 factor, FlgM AQ475_RS16435 PF01966 HD domain AQ475_RS16435 PF01743 Poly A polymerase head domain AQ475_RS16435 PF12627 Probable RNA and SrmB- binding site of polymerase A AQ475_RS16450 PF14718 Soluble lytic murein transglycosylase L domain AQ475_RS16450 PF01464 Transglycosylase SLT domain AQ475_RS16455 PF01812 5-formyltetrahydrofolate cyclo-ligase family AQ475_RS16465 PF02682 Carboxyltransferase domain, subdomain C and D AQ475_RS16470 PF02626 Carboxyltransferase domain, subdomain A and B AQ475_RS16475 PF03746 LamB/YcsF family AQ475_RS16500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ475_RS16500 PF00005 ABC transporter AQ475_RS16505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AQ475_RS16505 PF00005 ABC transporter AQ475_RS16510 PF12911 N-terminal TM domain of oligopeptide transport permease C AQ475_RS16510 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS16515 PF00528 Binding-protein-dependent transport system inner membrane component AQ475_RS16520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AQ475_RS16525 PF07690 Major Facilitator Superfamily AQ475_RS16530 PF01355 High potential iron-sulfur protein AQ475_RS16535 PF01266 FAD dependent oxidoreductase AQ475_RS16540 PF00004 ATPase family associated with various cellular activities (AAA) AQ475_RS16540 PF05362 Lon protease (S16) C-terminal proteolytic domain AQ475_RS16550 PF03372 Endonuclease/Exonuclease/phosphatase family AQ475_RS16555 PF01810 LysE type translocator AQ475_RS16560 PF00175 Oxidoreductase NAD-binding domain AQ475_RS16560 PF00970 Oxidoreductase FAD-binding domain AQ475_RS16565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS16565 PF07730 Histidine kinase AQ475_RS16565 PF05231 MASE1 AQ475_RS16570 PF00196 Bacterial regulatory proteins, luxR family AQ475_RS16570 PF00072 Response regulator receiver domain AQ475_RS16575 PF13520 Amino acid permease AQ475_RS16590 PF01312 FlhB HrpN YscU SpaS Family AQ475_RS16605 PF02561 Flagellar protein FliS AQ475_RS16610 PF02049 Flagellar hook-basal body complex protein FliE AQ475_RS16615 PF08345 Flagellar M-ring protein C-terminal AQ475_RS16615 PF01514 Secretory protein of YscJ/FliF family AQ475_RS16620 PF14842 FliG N-terminal domain AQ475_RS16620 PF14841 FliG middle domain AQ475_RS16620 PF01706 FliG C-terminal domain AQ475_RS16625 PF02108 Flagellar assembly protein FliH AQ475_RS16630 PF18269 T3SS EscN ATPase C-terminal domain AQ475_RS16630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AQ475_RS16645 PF05199 GMC oxidoreductase AQ475_RS16645 PF00732 GMC oxidoreductase AQ475_RS16650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AQ475_RS16650 PF18158 Adaptive response protein AidB N-terminal domain AQ475_RS16650 PF02770 Acyl-CoA dehydrogenase, middle domain AQ475_RS16655 PF00171 Aldehyde dehydrogenase family AQ475_RS16660 PF01370 NAD dependent epimerase/dehydratase family AQ475_RS16665 PF08666 SAF domain AQ475_RS16665 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AQ475_RS16670 PF13378 Enolase C-terminal domain-like AQ475_RS16670 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AQ475_RS16675 PF13378 Enolase C-terminal domain-like AQ475_RS16680 PF07690 Major Facilitator Superfamily AQ475_RS16685 PF00171 Aldehyde dehydrogenase family AQ475_RS16690 PF00701 Dihydrodipicolinate synthetase family AQ475_RS16695 PF03466 LysR substrate binding domain AQ475_RS16695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS16700 PF01636 Phosphotransferase enzyme family AQ475_RS16710 PF07690 Major Facilitator Superfamily AQ475_RS16720 PF00892 EamA-like transporter family AQ475_RS16730 PF00248 Aldo/keto reductase family AQ475_RS16750 PF02773 S-adenosylmethionine synthetase, C-terminal domain AQ475_RS16750 PF02772 S-adenosylmethionine synthetase, central domain AQ475_RS16750 PF00438 S-adenosylmethionine synthetase, N-terminal domain AQ475_RS16755 PF03279 Bacterial lipid A biosynthesis acyltransferase AQ475_RS16760 PF01678 Diaminopimelate epimerase AQ475_RS16770 PF00589 Phage integrase family AQ475_RS16770 PF02899 Phage integrase, N-terminal SAM-like domain AQ475_RS16775 PF17785 PUA-like domain AQ475_RS16775 PF10672 S-adenosylmethionine-dependent methyltransferase AQ475_RS16780 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ475_RS16780 PF07683 Cobalamin synthesis protein cobW C-terminal domain AQ475_RS16785 PF01258 Prokaryotic dksA/traR C4-type zinc finger AQ475_RS16790 PF00227 Proteasome subunit AQ475_RS16795 PF00004 ATPase family associated with various cellular activities (AAA) AQ475_RS16795 PF07724 AAA domain (Cdc48 subfamily) AQ475_RS16800 PF02954 Bacterial regulatory protein, Fis family AQ475_RS16800 PF00072 Response regulator receiver domain AQ475_RS16805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS16805 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS16815 PF00696 Amino acid kinase family AQ475_RS16825 PF00440 Bacterial regulatory proteins, tetR family AQ475_RS16830 PF00561 alpha/beta hydrolase fold AQ475_RS16840 PF07690 Major Facilitator Superfamily AQ475_RS16850 PF06719 AraC-type transcriptional regulator N-terminus AQ475_RS16850 PF12833 Helix-turn-helix domain AQ475_RS16855 PF08240 Alcohol dehydrogenase GroES-like domain AQ475_RS16855 PF00107 Zinc-binding dehydrogenase AQ475_RS16860 PF03372 Endonuclease/Exonuclease/phosphatase family AQ475_RS16865 PF03976 Polyphosphate kinase 2 (PPK2) AQ475_RS16870 PF02637 GatB domain AQ475_RS16870 PF02934 GatB/GatE catalytic domain AQ475_RS16875 PF01425 Amidase AQ475_RS16880 PF02686 Glu-tRNAGln amidotransferase C subunit AQ475_RS16900 PF00905 Penicillin binding protein transpeptidase domain AQ475_RS16900 PF03717 Penicillin-binding Protein dimerisation domain AQ475_RS16905 PF01098 Cell cycle protein AQ475_RS16915 PF03328 HpcH/HpaI aldolase/citrate lyase family AQ475_RS16920 PF01242 6-pyruvoyl tetrahydropterin synthase AQ475_RS16930 PF06508 Queuosine biosynthesis protein QueC AQ475_RS16940 PF02954 Bacterial regulatory protein, Fis family AQ475_RS16940 PF00072 Response regulator receiver domain AQ475_RS16940 PF00158 Sigma-54 interaction domain AQ475_RS16945 PF00672 HAMP domain AQ475_RS16945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS16945 PF00989 PAS fold AQ475_RS16945 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS16955 PF01029 NusB family AQ475_RS16955 PF01189 16S rRNA methyltransferase RsmB/F AQ475_RS16960 PF01435 Peptidase family M48 AQ475_RS16965 PF01810 LysE type translocator AQ475_RS16970 PF00551 Formyl transferase AQ475_RS16970 PF02911 Formyl transferase, C-terminal domain AQ475_RS16975 PF01327 Polypeptide deformylase AQ475_RS16980 PF02481 DNA recombination-mediator protein A AQ475_RS16980 PF17782 DprA winged helix domain AQ475_RS16990 PF01131 DNA topoisomerase AQ475_RS16990 PF01751 Toprim domain AQ475_RS16995 PF03466 LysR substrate binding domain AQ475_RS16995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AQ475_RS17000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AQ475_RS17000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AQ475_RS17025 PF01527 Transposase AQ475_RS17030 PF13276 HTH-like domain AQ475_RS17030 PF13683 Integrase core domain AQ475_RS17045 PF04545 Sigma-70, region 4 AQ475_RS17045 PF04539 Sigma-70 region 3 AQ475_RS17045 PF04546 Sigma-70, non-essential region AQ475_RS17045 PF03979 Sigma-70 factor, region 1.1 AQ475_RS17045 PF00140 Sigma-70 factor, region 1.2 AQ475_RS17045 PF04542 Sigma-70 region 2 AQ475_RS17050 PF04262 Glutamate-cysteine ligase AQ475_RS17055 PF02805 Metal binding domain of Ada AQ475_RS17055 PF12833 Helix-turn-helix domain AQ475_RS17055 PF00730 HhH-GPD superfamily base excision DNA repair protein AQ475_RS17055 PF06029 AlkA N-terminal domain AQ475_RS17060 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AQ475_RS17060 PF12833 Helix-turn-helix domain AQ475_RS17060 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AQ475_RS17060 PF02805 Metal binding domain of Ada AQ475_RS17070 PF07152 YaeQ protein AQ475_RS17080 PF13302 Acetyltransferase (GNAT) domain AQ475_RS17105 PF01527 Transposase AQ475_RS17110 PF13276 HTH-like domain AQ475_RS17110 PF01527 Transposase AQ475_RS17110 PF00665 Integrase core domain AQ475_RS17115 PF08401 Domain of unknown function (DUF1738) AQ475_RS17115 PF13362 Toprim domain AQ475_RS17115 PF18818 Metallopeptidase superfamily domain AQ475_RS17145 PF02796 Helix-turn-helix domain of resolvase AQ475_RS17145 PF00239 Resolvase, N terminal domain AQ475_RS17155 PF00589 Phage integrase family AQ475_RS17155 PF13356 Arm DNA-binding domain AQ475_RS17160 PF01926 50S ribosome-binding GTPase AQ475_RS17160 PF10396 GTP-binding protein TrmE N-terminus AQ475_RS17160 PF12631 MnmE helical domain AQ475_RS17170 PF02096 60Kd inner membrane protein AQ475_RS17170 PF14849 YidC periplasmic domain AQ475_RS17175 PF01809 Putative membrane protein insertion efficiency factor AQ475_RS17180 PF00825 Ribonuclease P AQ475_RS17185 PF00468 Ribosomal protein L34 AQ475_RS17405 PF01555 DNA methylase AQ475_RS17405 PF18273 Type III R-M EcoP15I C-terminal domain AQ475_RS17455 PF01311 Bacterial export proteins, family 1 AQ475_RS17520 PF03934 Type II secretion system (T2SS), protein K AQ475_RS17800 PF00403 Heavy-metal-associated domain AQ475_RS17915 PF13361 UvrD-like helicase C-terminal domain AQ475_RS17915 PF00580 UvrD/REP helicase N-terminal domain AQ475_RS18160 PF03975 CheD chemotactic sensory transduction AQ475_RS18310 PF07690 Major Facilitator Superfamily AQ475_RS18490 PF05000 RNA polymerase Rpb1, domain 4 AQ475_RS18490 PF04997 RNA polymerase Rpb1, domain 1 AQ475_RS18490 PF00623 RNA polymerase Rpb1, domain 2 AQ475_RS18490 PF04998 RNA polymerase Rpb1, domain 5 AQ475_RS18490 PF04983 RNA polymerase Rpb1, domain 3 AQ475_RS18715 PF01493 GXGXG motif AQ475_RS18715 PF01645 Conserved region in glutamate synthase AQ475_RS18715 PF04898 Glutamate synthase central domain AQ475_RS18715 PF00310 Glutamine amidotransferases class-II AQ475_RS18725 PF00310 Glutamine amidotransferases class-II AQ475_RS18725 PF01493 GXGXG motif AQ475_RS18725 PF01645 Conserved region in glutamate synthase AQ475_RS18725 PF04898 Glutamate synthase central domain AQ475_RS18730 PF00310 Glutamine amidotransferases class-II AQ475_RS18730 PF04898 Glutamate synthase central domain AQ475_RS18730 PF01493 GXGXG motif AQ475_RS18730 PF01645 Conserved region in glutamate synthase AQ475_RS19095 PF06744 Type VI secretion protein IcmF C-terminal AQ475_RS19095 PF06761 Intracellular multiplication and human macrophage-killing AQ475_RS19095 PF14331 ImcF-related N-terminal domain AQ475_RS19115 PF03412 Peptidase C39 family AQ475_RS19115 PF00005 ABC transporter AQ475_RS19115 PF00664 ABC transporter transmembrane region AQ475_RS19255 PF01494 FAD binding domain AQ475_RS19335 PF14535 AMP-binding enzyme C-terminal domain AQ475_RS19335 PF00501 AMP-binding enzyme AQ475_RS19400 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS19400 PF00501 AMP-binding enzyme AQ475_RS19525 PF07516 SecA Wing and Scaffold domain AQ475_RS19525 PF07517 SecA DEAD-like domain AQ475_RS19525 PF02810 SEC-C motif AQ475_RS19525 PF01043 SecA preprotein cross-linking domain AQ475_RS19560 PF06750 Bacterial Peptidase A24 N-terminal domain AQ475_RS19560 PF01478 Type IV leader peptidase family AQ475_RS19675 PF13333 Integrase core domain AQ475_RS19675 PF13276 HTH-like domain AQ475_RS19675 PF00665 Integrase core domain AQ475_RS19715 PF01018 GTP1/OBG AQ475_RS19715 PF01926 50S ribosome-binding GTPase AQ475_RS19930 PF03949 Malic enzyme, NAD binding domain AQ475_RS19930 PF01515 Phosphate acetyl/butaryl transferase AQ475_RS19930 PF00390 Malic enzyme, N-terminal domain AQ475_RS19985 PF00375 Sodium:dicarboxylate symporter family AQ475_RS20000 PF04355 SmpA / OmlA family AQ475_RS20020 PF08264 Anticodon-binding domain of tRNA AQ475_RS20020 PF00133 tRNA synthetases class I (I, L, M and V) AQ475_RS20020 PF09334 tRNA synthetases class I (M) AQ475_RS20020 PF13603 Leucyl-tRNA synthetase, Domain 2 AQ475_RS20135 PF13230 Glutamine amidotransferases class-II AQ475_RS20185 PF00579 tRNA synthetases class I (W and Y) AQ475_RS20185 PF01479 S4 domain AQ475_RS20240 PF01207 Dihydrouridine synthase (Dus) AQ475_RS20255 PF05195 Aminopeptidase P, N-terminal domain AQ475_RS20255 PF00557 Metallopeptidase family M24 AQ475_RS20365 PF07549 SecD/SecF GG Motif AQ475_RS20365 PF02355 Protein export membrane protein AQ475_RS20365 PF13721 SecD export protein N-terminal TM region AQ475_RS20580 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AQ475_RS20580 PF01628 HrcA protein C terminal domain AQ475_RS20590 PF00762 Ferrochelatase AQ475_RS20780 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ475_RS20780 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ475_RS20780 PF16197 Ketoacyl-synthetase C-terminal extension AQ475_RS20780 PF00698 Acyl transferase domain AQ475_RS20780 PF08659 KR domain AQ475_RS20780 PF14765 Polyketide synthase dehydratase AQ475_RS20780 PF00550 Phosphopantetheine attachment site AQ475_RS20810 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AQ475_RS20905 PF00534 Glycosyl transferases group 1 AQ475_RS20905 PF13439 Glycosyltransferase Family 4 AQ475_RS21105 PF07690 Major Facilitator Superfamily AQ475_RS21210 PF10605 3HB-oligomer hydrolase (3HBOH) AQ475_RS21380 PF16363 GDP-mannose 4,6 dehydratase AQ475_RS21695 PF07690 Major Facilitator Superfamily AQ475_RS22145 PF00521 DNA gyrase/topoisomerase IV, subunit A AQ475_RS22145 PF03989 DNA gyrase C-terminal domain, beta-propeller AQ475_RS22240 PF07995 Glucose / Sorbosone dehydrogenase AQ475_RS22475 PF12111 Polyribonucleotide phosphorylase C terminal AQ475_RS22475 PF10150 Ribonuclease E/G family AQ475_RS22475 PF00575 S1 RNA binding domain AQ475_RS22565 PF04542 Sigma-70 region 2 AQ475_RS22565 PF08281 Sigma-70, region 4 AQ475_RS22615 PF02151 UvrB/uvrC motif AQ475_RS22615 PF08459 UvrC Helix-hairpin-helix N-terminal AQ475_RS22615 PF01541 GIY-YIG catalytic domain AQ475_RS22650 PF02358 Trehalose-phosphatase AQ475_RS22700 PF13458 Periplasmic binding protein AQ475_RS22785 PF00171 Aldehyde dehydrogenase family AQ475_RS23095 PF02515 CoA-transferase family III AQ475_RS23230 PF07690 Major Facilitator Superfamily AQ475_RS23260 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AQ475_RS23260 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AQ475_RS23275 PF00456 Transketolase, thiamine diphosphate binding domain AQ475_RS23275 PF17831 Pyruvate dehydrogenase E1 component middle domain AQ475_RS23555 PF00550 Phosphopantetheine attachment site AQ475_RS23555 PF00668 Condensation domain AQ475_RS23555 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS23555 PF00501 AMP-binding enzyme AQ475_RS23560 PF00550 Phosphopantetheine attachment site AQ475_RS23560 PF13193 AMP-binding enzyme C-terminal domain AQ475_RS23560 PF00501 AMP-binding enzyme AQ475_RS23560 PF00668 Condensation domain AQ475_RS23635 PF00291 Pyridoxal-phosphate dependent enzyme AQ475_RS23655 PF00557 Metallopeptidase family M24 AQ475_RS23900 PF01966 HD domain AQ475_RS23900 PF08335 GlnD PII-uridylyltransferase AQ475_RS23900 PF01909 Nucleotidyltransferase domain AQ475_RS23915 PF00318 Ribosomal protein S2 AQ475_RS24310 PF02559 CarD-like/TRCF domain AQ475_RS24310 PF00271 Helicase conserved C-terminal domain AQ475_RS24310 PF00270 DEAD/DEAH box helicase AQ475_RS24310 PF03461 TRCF domain AQ475_RS24310 PF17757 UvrB interaction domain AQ475_RS24480 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AQ475_RS24480 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AQ475_RS24480 PF02769 AIR synthase related protein, C-terminal domain AQ475_RS24595 PF02463 RecF/RecN/SMC N terminal domain AQ475_RS24705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AQ475_RS24825 PF12170 DNA polymerase III tau subunit V interacting with alpha AQ475_RS24825 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AQ475_RS24825 PF12169 DNA polymerase III subunits gamma and tau domain III AQ475_RS24995 PF13307 Helicase C-terminal domain AQ475_RS24995 PF04851 Type III restriction enzyme, res subunit AQ475_RS25010 PF01479 S4 domain AQ475_RS25010 PF00849 RNA pseudouridylate synthase AQ475_RS25040 PF00108 Thiolase, N-terminal domain AQ475_RS25040 PF02803 Thiolase, C-terminal domain AQ475_RS25050 PF00919 Uncharacterized protein family UPF0004 AQ475_RS25050 PF18693 TRAM domain AQ475_RS25050 PF04055 Radical SAM superfamily AQ475_RS25085 PF00005 ABC transporter AQ475_RS25130 PF01566 Natural resistance-associated macrophage protein AQ475_RS25575 PF00361 Proton-conducting membrane transporter AQ475_RS25575 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AQ475_RS25665 PF00550 Phosphopantetheine attachment site AQ475_RS25665 PF08242 Methyltransferase domain AQ475_RS25665 PF00668 Condensation domain AQ475_RS25665 PF00501 AMP-binding enzyme AQ475_RS25715 PF14765 Polyketide synthase dehydratase AQ475_RS25715 PF00550 Phosphopantetheine attachment site AQ475_RS25715 PF08659 KR domain AQ475_RS25715 PF02801 Beta-ketoacyl synthase, C-terminal domain AQ475_RS25715 PF00109 Beta-ketoacyl synthase, N-terminal domain AQ475_RS25715 PF16197 Ketoacyl-synthetase C-terminal extension AQ475_RS25820 PF02492 CobW/HypB/UreG, nucleotide-binding domain AQ475_RS25820 PF07683 Cobalamin synthesis protein cobW C-terminal domain AQ475_RS25930 PF02321 Outer membrane efflux protein AQ475_RS25945 PF00873 AcrB/AcrD/AcrF family AQ475_RS26075 PF08298 PrkA AAA domain AQ475_RS26075 PF06798 PrkA serine protein kinase C-terminal domain AQ475_RS26110 PF00005 ABC transporter AQ475_RS26210 PF01207 Dihydrouridine synthase (Dus) AQ475_RS26560 PF04760 Translation initiation factor IF-2, N-terminal region AQ475_RS26560 PF08364 Bacterial translation initiation factor IF-2 associated region AQ475_RS26560 PF11987 Translation-initiation factor 2 AQ475_RS26560 PF00009 Elongation factor Tu GTP binding domain AQ475_RS26690 PF02824 TGS domain AQ475_RS26690 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ475_RS26690 PF03129 Anticodon binding domain AQ475_RS26690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AQ475_RS26825 PF13361 UvrD-like helicase C-terminal domain AQ475_RS26825 PF00580 UvrD/REP helicase N-terminal domain AQ475_RS26835 PF08264 Anticodon-binding domain of tRNA AQ475_RS26835 PF00133 tRNA synthetases class I (I, L, M and V) AQ475_RS26835 PF10458 Valyl tRNA synthetase tRNA binding arm AQ475_RS26850 PF00512 His Kinase A (phospho-acceptor) domain AQ475_RS26850 PF13426 PAS domain AQ475_RS26850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AQ475_RS26850 PF00672 HAMP domain AQ475_RS26850 PF14827 Double sensory domain of two-component sensor kinase AQ475_RS26970 PF01411 tRNA synthetases class II (A) AQ475_RS26970 PF02272 DHHA1 domain AQ475_RS26970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AQ475_RS27280 PF02673 Bacitracin resistance protein BacA AQ475_RS27310 PF01554 MatE AQ475_RS27370 PF00005 ABC transporter AQ475_RS27615 PF00005 ABC transporter AQ475_RS27615 PF08402 TOBE domain AQ475_RS27685 PF00563 EAL domain AQ475_RS27685 PF12792 CSS motif domain associated with EAL AQ475_RS27720 PF13361 UvrD-like helicase C-terminal domain AQ475_RS27720 PF12705 PD-(D/E)XK nuclease superfamily AQ475_RS27720 PF00580 UvrD/REP helicase N-terminal domain AQ475_RS28025 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AQ475_RS28085 PF00682 HMGL-like AQ475_RS28085 PF08502 LeuA allosteric (dimerisation) domain AQ475_RS28370 PF00005 ABC transporter AQ475_RS28370 PF00664 ABC transporter transmembrane region AQ475_RS28510 PF00474 Sodium:solute symporter family AQ475_RS28570 PF03707 Bacterial signalling protein N terminal repeat AQ475_RS28570 PF00990 Diguanylate cyclase, GGDEF domain AQ475_RS28570 PF00563 EAL domain AQ475_RS28845 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AQ475_RS28845 PF07733 Bacterial DNA polymerase III alpha NTPase domain AQ475_RS28845 PF14579 Helix-hairpin-helix motif AQ475_RS28895 PF13005 zinc-finger binding domain of transposase IS66 AQ475_RS28895 PF03050 Transposase IS66 family AQ475_RS28895 PF13817 IS66 C-terminal element AQ475_RS28895 PF13007 Transposase C of IS166 homeodomain AQ475_RS29045 PF17954 Quercetinase C-terminal cupin domain AQ475_RS29045 PF02678 Pirin AQ475_RS29095 PF07690 Major Facilitator Superfamily AQ475_RS29330 PF02789 Cytosol aminopeptidase family, N-terminal domain AQ475_RS29330 PF00883 Cytosol aminopeptidase family, catalytic domain