AQ475_RS00070	PWY-1361	benzoyl-CoA degradation I (aerobic)
AQ475_RS00070	PWY-5109	2-methylbutanoate biosynthesis
AQ475_RS00070	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AQ475_RS00070	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AQ475_RS00070	PWY-5177	glutaryl-CoA degradation
AQ475_RS00070	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AQ475_RS00070	PWY-6435	4-hydroxybenzoate biosynthesis V
AQ475_RS00070	PWY-6583	pyruvate fermentation to butanol I
AQ475_RS00070	PWY-6863	pyruvate fermentation to hexanol
AQ475_RS00070	PWY-6883	pyruvate fermentation to butanol II
AQ475_RS00070	PWY-6944	androstenedione degradation
AQ475_RS00070	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AQ475_RS00070	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AQ475_RS00070	PWY-7007	methyl ketone biosynthesis
AQ475_RS00070	PWY-7046	4-coumarate degradation (anaerobic)
AQ475_RS00070	PWY-7094	fatty acid salvage
AQ475_RS00070	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AQ475_RS00070	PWY-735	jasmonic acid biosynthesis
AQ475_RS00070	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AQ475_RS00070	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AQ475_RS00070	PWY-7726	AQ475_RS00070
AQ475_RS00115	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AQ475_RS00115	PWY-7494	choline degradation IV
AQ475_RS00380	PWY-6840	homoglutathione biosynthesis
AQ475_RS00380	PWY-7255	ergothioneine biosynthesis I (bacteria)
AQ475_RS00425	PWY-7158	L-phenylalanine degradation V
AQ475_RS00430	PWY-6134	L-tyrosine biosynthesis IV
AQ475_RS00430	PWY-7158	L-phenylalanine degradation V
AQ475_RS00450	PWY-5642	2,4-dinitrotoluene degradation
AQ475_RS00450	PWY-6373	acrylate degradation
AQ475_RS00455	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AQ475_RS00455	PWY-7494	choline degradation IV
AQ475_RS00560	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS00570	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS00590	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AQ475_RS00590	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AQ475_RS00605	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AQ475_RS00605	PWY-6853	ethylene biosynthesis II (microbes)
AQ475_RS00605	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AQ475_RS00730	PWY-6986	alginate degradation
AQ475_RS01080	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AQ475_RS01090	PWY-2201	folate transformations I
AQ475_RS01090	PWY-3841	folate transformations II
AQ475_RS01095	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AQ475_RS01105	PWY-723	alkylnitronates degradation
AQ475_RS01155	PWY-2201	folate transformations I
AQ475_RS01255	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AQ475_RS01255	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AQ475_RS01270	PWY-5686	UMP biosynthesis
AQ475_RS01275	PWY-1281	sulfoacetaldehyde degradation I
AQ475_RS01275	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AQ475_RS01275	PWY-5482	pyruvate fermentation to acetate II
AQ475_RS01275	PWY-5485	pyruvate fermentation to acetate IV
AQ475_RS01275	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS01275	PWY-6637	sulfolactate degradation II
AQ475_RS01275	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AQ475_RS01335	PWY-5176	coumarin biosynthesis (via 2-coumarate)
AQ475_RS01625	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AQ475_RS01625	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AQ475_RS01660	PWY-2941	L-lysine biosynthesis II
AQ475_RS01660	PWY-2942	L-lysine biosynthesis III
AQ475_RS01660	PWY-5097	L-lysine biosynthesis VI
AQ475_RS01700	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AQ475_RS01705	PWY-6164	3-dehydroquinate biosynthesis I
AQ475_RS01790	PWY-6891	thiazole biosynthesis II (Bacillus)
AQ475_RS01790	PWY-6892	thiazole biosynthesis I (E. coli)
AQ475_RS01795	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AQ475_RS01795	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AQ475_RS01795	PWY-6897	thiamin salvage II
AQ475_RS01795	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AQ475_RS01795	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AQ475_RS01795	PWY-7356	thiamin salvage IV (yeast)
AQ475_RS01795	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AQ475_RS01845	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AQ475_RS01845	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AQ475_RS01935	PWY-3781	aerobic respiration I (cytochrome c)
AQ475_RS01935	PWY-6692	Fe(II) oxidation
AQ475_RS01935	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
AQ475_RS01935	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AQ475_RS02260	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AQ475_RS02360	PWY-5958	acridone alkaloid biosynthesis
AQ475_RS02360	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AQ475_RS02360	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AQ475_RS02365	PWY-5958	acridone alkaloid biosynthesis
AQ475_RS02365	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AQ475_RS02365	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AQ475_RS02370	PWY-181	photorespiration
AQ475_RS02375	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AQ475_RS02375	PWY-5723	Rubisco shunt
AQ475_RS02390	PWY-1341	phenylacetate degradation II (anaerobic)
AQ475_RS02390	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
AQ475_RS02390	PWY-7716	AQ475_RS02390
AQ475_RS02405	PWY-1361	benzoyl-CoA degradation I (aerobic)
AQ475_RS02405	PWY-2361	3-oxoadipate degradation
AQ475_RS02405	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
AQ475_RS02470	PWY-2201	folate transformations I
AQ475_RS02490	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AQ475_RS02490	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AQ475_RS02495	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AQ475_RS02495	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AQ475_RS02495	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AQ475_RS02500	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AQ475_RS02500	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AQ475_RS02510	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AQ475_RS02510	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AQ475_RS02510	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AQ475_RS02510	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AQ475_RS02515	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AQ475_RS02515	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AQ475_RS02520	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AQ475_RS02520	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AQ475_RS02545	PWY-2201	folate transformations I
AQ475_RS02545	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS02560	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AQ475_RS02760	PWY-3341	L-proline biosynthesis III
AQ475_RS02760	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AQ475_RS02810	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AQ475_RS02810	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AQ475_RS02810	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AQ475_RS02810	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AQ475_RS02810	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS02810	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS02810	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AQ475_RS02810	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AQ475_RS02815	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AQ475_RS02815	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AQ475_RS02815	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AQ475_RS02815	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AQ475_RS02815	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS02815	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS02815	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AQ475_RS02815	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AQ475_RS02860	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AQ475_RS02860	PWY-6416	quinate degradation II
AQ475_RS02860	PWY-6707	gallate biosynthesis
AQ475_RS02890	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AQ475_RS02915	PWY-7130	L-glucose degradation
AQ475_RS02920	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AQ475_RS02920	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AQ475_RS02920	PWY-7242	D-fructuronate degradation
AQ475_RS02920	PWY-7310	D-glucosaminate degradation
AQ475_RS02920	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AQ475_RS02955	PWY-5686	UMP biosynthesis
AQ475_RS02970	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
AQ475_RS02970	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
AQ475_RS02970	PWY-6896	thiamin salvage I
AQ475_RS02970	PWY-6897	thiamin salvage II
AQ475_RS02975	PWY-1281	sulfoacetaldehyde degradation I
AQ475_RS02975	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AQ475_RS02975	PWY-5482	pyruvate fermentation to acetate II
AQ475_RS02975	PWY-5485	pyruvate fermentation to acetate IV
AQ475_RS02975	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS02975	PWY-6637	sulfolactate degradation II
AQ475_RS02975	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AQ475_RS02995	PWY-2201	folate transformations I
AQ475_RS03010	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AQ475_RS03010	PWY-5723	Rubisco shunt
AQ475_RS03010	PWY-6891	thiazole biosynthesis II (Bacillus)
AQ475_RS03010	PWY-6892	thiazole biosynthesis I (E. coli)
AQ475_RS03010	PWY-6901	superpathway of glucose and xylose degradation
AQ475_RS03010	PWY-7560	methylerythritol phosphate pathway II
AQ475_RS03015	PWY-1042	glycolysis IV (plant cytosol)
AQ475_RS03015	PWY-5484	glycolysis II (from fructose 6-phosphate)
AQ475_RS03015	PWY-6901	superpathway of glucose and xylose degradation
AQ475_RS03015	PWY-7003	glycerol degradation to butanol
AQ475_RS03025	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AQ475_RS03025	PWY-6416	quinate degradation II
AQ475_RS03025	PWY-6707	gallate biosynthesis
AQ475_RS03030	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AQ475_RS03030	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AQ475_RS03030	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AQ475_RS03030	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AQ475_RS03050	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
AQ475_RS03055	PWY-5694	allantoin degradation to glyoxylate I
AQ475_RS03055	PWY-5705	allantoin degradation to glyoxylate III
AQ475_RS03070	PWY-2941	L-lysine biosynthesis II
AQ475_RS03070	PWY-2942	L-lysine biosynthesis III
AQ475_RS03070	PWY-5097	L-lysine biosynthesis VI
AQ475_RS03100	PWY-3341	L-proline biosynthesis III
AQ475_RS03100	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AQ475_RS03115	PWY-5101	L-isoleucine biosynthesis II
AQ475_RS03115	PWY-5103	L-isoleucine biosynthesis III
AQ475_RS03115	PWY-5104	L-isoleucine biosynthesis IV
AQ475_RS03115	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AQ475_RS03120	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AQ475_RS03120	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AQ475_RS03120	PWY-7242	D-fructuronate degradation
AQ475_RS03120	PWY-7310	D-glucosaminate degradation
AQ475_RS03120	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
AQ475_RS03130	PWY-5530	sorbitol biosynthesis II
AQ475_RS03130	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AQ475_RS03135	PWY-6123	inosine-5'-phosphate biosynthesis I
AQ475_RS03135	PWY-6124	inosine-5'-phosphate biosynthesis II
AQ475_RS03135	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS03135	PWY-7234	inosine-5'-phosphate biosynthesis III
AQ475_RS03180	PWY-5686	UMP biosynthesis
AQ475_RS03280	PWY-6123	inosine-5'-phosphate biosynthesis I
AQ475_RS03280	PWY-6124	inosine-5'-phosphate biosynthesis II
AQ475_RS03280	PWY-7234	inosine-5'-phosphate biosynthesis III
AQ475_RS03355	PWY-6825	phosphatidylcholine biosynthesis V
AQ475_RS03425	PWY-6700	queuosine biosynthesis
AQ475_RS03430	PWY-6700	queuosine biosynthesis
AQ475_RS03445	PWY-5506	methanol oxidation to formaldehyde IV
AQ475_RS03475	PWY-3341	L-proline biosynthesis III
AQ475_RS03475	PWY-4981	L-proline biosynthesis II (from arginine)
AQ475_RS03475	PWY-6344	L-ornithine degradation II (Stickland reaction)
AQ475_RS03480	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AQ475_RS03505	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AQ475_RS03505	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AQ475_RS03505	PWY-6268	adenosylcobalamin salvage from cobalamin
AQ475_RS03505	PWY-6269	adenosylcobalamin salvage from cobinamide II
AQ475_RS03515	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AQ475_RS03515	PWY-6164	3-dehydroquinate biosynthesis I
AQ475_RS03515	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AQ475_RS03545	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AQ475_RS03545	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AQ475_RS03545	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AQ475_RS03585	PWY-5958	acridone alkaloid biosynthesis
AQ475_RS03585	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AQ475_RS03585	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AQ475_RS03590	PWY-6654	phosphopantothenate biosynthesis III
AQ475_RS03600	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AQ475_RS03600	PWY-6148	tetrahydromethanopterin biosynthesis
AQ475_RS03600	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AQ475_RS03600	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AQ475_RS03625	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AQ475_RS03625	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AQ475_RS03625	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AQ475_RS03630	PWY-2582	brassinosteroid biosynthesis II
AQ475_RS03630	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AQ475_RS03630	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AQ475_RS03630	PWY-6948	sitosterol degradation to androstenedione
AQ475_RS03630	PWY-699	brassinosteroid biosynthesis I
AQ475_RS03630	PWY-7299	progesterone biosynthesis
AQ475_RS03635	PWY-2781	<i>cis</i>-zeatin biosynthesis
AQ475_RS03660	PWY-5659	GDP-mannose biosynthesis
AQ475_RS03660	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AQ475_RS03695	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
AQ475_RS03695	PWY-5739	GDP-D-perosamine biosynthesis
AQ475_RS03695	PWY-5740	GDP-L-colitose biosynthesis
AQ475_RS03695	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AQ475_RS03695	PWY-7573	GDP-mycosamine biosynthesis
AQ475_RS03750	PWY-2201	folate transformations I
AQ475_RS03750	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS03825	PWY-6936	seleno-amino acid biosynthesis
AQ475_RS03825	PWY-7274	D-cycloserine biosynthesis
AQ475_RS03840	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AQ475_RS03840	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AQ475_RS03845	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AQ475_RS03845	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AQ475_RS03855	PWY-3801	sucrose degradation II (sucrose synthase)
AQ475_RS03855	PWY-6527	stachyose degradation
AQ475_RS03855	PWY-7238	sucrose biosynthesis II
AQ475_RS03855	PWY-7343	UDP-glucose biosynthesis
AQ475_RS03875	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
AQ475_RS03875	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AQ475_RS03935	PWY-1622	formaldehyde assimilation I (serine pathway)
AQ475_RS03935	PWY-181	photorespiration
AQ475_RS03935	PWY-2161	folate polyglutamylation
AQ475_RS03935	PWY-2201	folate transformations I
AQ475_RS03935	PWY-3661	glycine betaine degradation I
AQ475_RS03935	PWY-3661-1	glycine betaine degradation II (mammalian)
AQ475_RS03935	PWY-3841	folate transformations II
AQ475_RS03935	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS04000	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AQ475_RS04050	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AQ475_RS04050	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AQ475_RS04065	PWY-6832	2-aminoethylphosphonate degradation II
AQ475_RS04085	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS04085	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AQ475_RS04085	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AQ475_RS04085	PWY-6596	adenosine nucleotides degradation I
AQ475_RS04085	PWY-6606	guanosine nucleotides degradation II
AQ475_RS04085	PWY-6607	guanosine nucleotides degradation I
AQ475_RS04085	PWY-6608	guanosine nucleotides degradation III
AQ475_RS04085	PWY-6999	theophylline degradation
AQ475_RS04090	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS04090	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AQ475_RS04090	PWY-6538	caffeine degradation III (bacteria, via demethylation)
AQ475_RS04090	PWY-6596	adenosine nucleotides degradation I
AQ475_RS04090	PWY-6606	guanosine nucleotides degradation II
AQ475_RS04090	PWY-6607	guanosine nucleotides degradation I
AQ475_RS04090	PWY-6608	guanosine nucleotides degradation III
AQ475_RS04090	PWY-6999	theophylline degradation
AQ475_RS04280	PWY-5686	UMP biosynthesis
AQ475_RS04285	PWY-5686	UMP biosynthesis
AQ475_RS04300	PWY-3221	dTDP-L-rhamnose biosynthesis II
AQ475_RS04300	PWY-6808	dTDP-D-forosamine biosynthesis
AQ475_RS04300	PWY-6942	dTDP-D-desosamine biosynthesis
AQ475_RS04300	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AQ475_RS04300	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AQ475_RS04300	PWY-6974	dTDP-L-olivose biosynthesis
AQ475_RS04300	PWY-6976	dTDP-L-mycarose biosynthesis
AQ475_RS04300	PWY-7104	dTDP-L-megosamine biosynthesis
AQ475_RS04300	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AQ475_RS04300	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AQ475_RS04300	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AQ475_RS04300	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AQ475_RS04300	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AQ475_RS04300	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AQ475_RS04300	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AQ475_RS04300	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AQ475_RS04300	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AQ475_RS04300	PWY-7688	AQ475_RS04300
AQ475_RS04305	PWY-3221	dTDP-L-rhamnose biosynthesis II
AQ475_RS04305	PWY-6808	dTDP-D-forosamine biosynthesis
AQ475_RS04305	PWY-6942	dTDP-D-desosamine biosynthesis
AQ475_RS04305	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
AQ475_RS04305	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
AQ475_RS04305	PWY-6974	dTDP-L-olivose biosynthesis
AQ475_RS04305	PWY-6976	dTDP-L-mycarose biosynthesis
AQ475_RS04305	PWY-7104	dTDP-L-megosamine biosynthesis
AQ475_RS04305	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
AQ475_RS04305	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
AQ475_RS04305	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
AQ475_RS04305	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
AQ475_RS04305	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
AQ475_RS04305	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
AQ475_RS04305	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
AQ475_RS04305	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
AQ475_RS04305	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
AQ475_RS04305	PWY-7688	AQ475_RS04305
AQ475_RS04365	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AQ475_RS04365	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AQ475_RS04365	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AQ475_RS04375	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AQ475_RS04375	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AQ475_RS04375	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AQ475_RS04380	PWY-3821	galactose degradation III
AQ475_RS04380	PWY-6317	galactose degradation I (Leloir pathway)
AQ475_RS04380	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AQ475_RS04380	PWY-6527	stachyose degradation
AQ475_RS04380	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AQ475_RS04380	PWY-7344	UDP-D-galactose biosynthesis
AQ475_RS04415	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AQ475_RS04435	PWY-5704	urea degradation II
AQ475_RS04440	PWY-5704	urea degradation II
AQ475_RS04445	PWY-5704	urea degradation II
AQ475_RS04520	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AQ475_RS04620	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AQ475_RS04620	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AQ475_RS04620	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AQ475_RS04620	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AQ475_RS04620	PWY-6978	plastoquinol-9 biosynthesis II
AQ475_RS04640	PWY-6167	flavin biosynthesis II (archaea)
AQ475_RS04640	PWY-6168	flavin biosynthesis III (fungi)
AQ475_RS04645	PWY-6167	flavin biosynthesis II (archaea)
AQ475_RS04645	PWY-6168	flavin biosynthesis III (fungi)
AQ475_RS04645	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AQ475_RS04650	PWY-6167	flavin biosynthesis II (archaea)
AQ475_RS04650	PWY-6168	flavin biosynthesis III (fungi)
AQ475_RS04650	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS04655	PWY-5525	D-glucuronate degradation I
AQ475_RS04660	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AQ475_RS04700	PWY-2722	trehalose degradation IV
AQ475_RS04700	PWY-2723	trehalose degradation V
AQ475_RS04700	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AQ475_RS04700	PWY-5661	GDP-glucose biosynthesis
AQ475_RS04700	PWY-621	sucrose degradation III (sucrose invertase)
AQ475_RS04700	PWY-7238	sucrose biosynthesis II
AQ475_RS04700	PWY-7385	1,3-propanediol biosynthesis (engineered)
AQ475_RS04705	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AQ475_RS04705	PWY-6855	chitin degradation I (archaea)
AQ475_RS04705	PWY-6906	chitin derivatives degradation
AQ475_RS04710	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AQ475_RS04770	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AQ475_RS04840	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AQ475_RS04880	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AQ475_RS04895	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS04945	PWY-3461	L-tyrosine biosynthesis II
AQ475_RS04945	PWY-3462	L-phenylalanine biosynthesis II
AQ475_RS04945	PWY-6120	L-tyrosine biosynthesis III
AQ475_RS04945	PWY-6627	salinosporamide A biosynthesis
AQ475_RS04945	PWY-7626	bacilysin biosynthesis
AQ475_RS04985	PWY-5484	glycolysis II (from fructose 6-phosphate)
AQ475_RS04995	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AQ475_RS04995	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AQ475_RS04995	PWY-6936	seleno-amino acid biosynthesis
AQ475_RS04995	PWY-702	L-methionine biosynthesis II
AQ475_RS05020	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS05020	PWY-6606	guanosine nucleotides degradation II
AQ475_RS05020	PWY-6608	guanosine nucleotides degradation III
AQ475_RS05020	PWY-7442	drosopterin and aurodrosopterin biosynthesis
AQ475_RS05030	PWY-6610	adenine and adenosine salvage IV
AQ475_RS05045	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AQ475_RS05085	PWY-1881	formate oxidation to CO<sub>2</sub>
AQ475_RS05085	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS05085	PWY-6696	oxalate degradation III
AQ475_RS05190	PWY-181	photorespiration
AQ475_RS05195	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
AQ475_RS05195	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
AQ475_RS05195	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
AQ475_RS05195	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AQ475_RS05195	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
AQ475_RS05195	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
AQ475_RS05195	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
AQ475_RS05195	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
AQ475_RS05195	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AQ475_RS05195	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
AQ475_RS05220	PWY-3461	L-tyrosine biosynthesis II
AQ475_RS05220	PWY-3462	L-phenylalanine biosynthesis II
AQ475_RS05220	PWY-6120	L-tyrosine biosynthesis III
AQ475_RS05220	PWY-6627	salinosporamide A biosynthesis
AQ475_RS05220	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AQ475_RS05220	PWY-7626	bacilysin biosynthesis
AQ475_RS05225	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AQ475_RS05230	PWY-7205	CMP phosphorylation
AQ475_RS05255	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
AQ475_RS05280	PWY-6936	seleno-amino acid biosynthesis
AQ475_RS05365	PWY-6829	tRNA methylation (yeast)
AQ475_RS05365	PWY-7285	methylwyosine biosynthesis
AQ475_RS05365	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
AQ475_RS05425	PWY-3841	folate transformations II
AQ475_RS05425	PWY-6614	tetrahydrofolate biosynthesis
AQ475_RS05455	PWY-3841	folate transformations II
AQ475_RS05455	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AQ475_RS05455	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS05455	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AQ475_RS05455	PWY-7199	pyrimidine deoxyribonucleosides salvage
AQ475_RS05455	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AQ475_RS05485	PWY-5392	reductive TCA cycle II
AQ475_RS05485	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AQ475_RS05485	PWY-5690	TCA cycle II (plants and fungi)
AQ475_RS05485	PWY-5913	TCA cycle VI (obligate autotrophs)
AQ475_RS05485	PWY-6728	methylaspartate cycle
AQ475_RS05485	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AQ475_RS05485	PWY-7254	TCA cycle VII (acetate-producers)
AQ475_RS05485	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AQ475_RS05550	PWY-5381	pyridine nucleotide cycling (plants)
AQ475_RS05585	PWY-6823	molybdenum cofactor biosynthesis
AQ475_RS05590	PWY-5964	guanylyl molybdenum cofactor biosynthesis
AQ475_RS05590	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
AQ475_RS05595	PWY-6823	molybdenum cofactor biosynthesis
AQ475_RS05625	PWY-2201	folate transformations I
AQ475_RS05650	PWY-4381	fatty acid biosynthesis initiation I
AQ475_RS05655	PWY-4381	fatty acid biosynthesis initiation I
AQ475_RS05655	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AQ475_RS05655	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AQ475_RS05660	PWY-5367	petroselinate biosynthesis
AQ475_RS05660	PWY-5515	L-arabinose degradation II
AQ475_RS05660	PWY-5525	D-glucuronate degradation I
AQ475_RS05660	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AQ475_RS05660	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AQ475_RS05660	PWY-5989	stearate biosynthesis II (bacteria and plants)
AQ475_RS05660	PWY-5994	palmitate biosynthesis I (animals and fungi)
AQ475_RS05660	PWY-6113	superpathway of mycolate biosynthesis
AQ475_RS05660	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AQ475_RS05660	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AQ475_RS05660	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AQ475_RS05660	PWY-7663	gondoate biosynthesis (anaerobic)
AQ475_RS05660	PWY-7664	oleate biosynthesis IV (anaerobic)
AQ475_RS05660	PWYG-321	mycolate biosynthesis
AQ475_RS05735	PWY-6012	acyl carrier protein metabolism I
AQ475_RS05735	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AQ475_RS05740	PWY-6902	chitin degradation II
AQ475_RS05765	PWY-5269	cardiolipin biosynthesis II
AQ475_RS05765	PWY-5668	cardiolipin biosynthesis I
AQ475_RS05865	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AQ475_RS05865	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AQ475_RS05880	PWY-5129	sphingolipid biosynthesis (plants)
AQ475_RS05985	PWY-3781	aerobic respiration I (cytochrome c)
AQ475_RS05985	PWY-4521	arsenite oxidation I (respiratory)
AQ475_RS05985	PWY-6692	Fe(II) oxidation
AQ475_RS05985	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AQ475_RS05985	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
AQ475_RS06065	PWY-723	alkylnitronates degradation
AQ475_RS06095	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS06095	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS06095	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS06100	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS06100	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS06100	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS06120	PWY-3781	aerobic respiration I (cytochrome c)
AQ475_RS06120	PWY-4521	arsenite oxidation I (respiratory)
AQ475_RS06120	PWY-6692	Fe(II) oxidation
AQ475_RS06120	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AQ475_RS06135	PWY-5340	sulfate activation for sulfonation
AQ475_RS06155	PWY-6012	acyl carrier protein metabolism I
AQ475_RS06155	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AQ475_RS06165	PWY-5028	L-histidine degradation II
AQ475_RS06165	PWY-5030	L-histidine degradation III
AQ475_RS06175	PWY-5028	L-histidine degradation II
AQ475_RS06175	PWY-5030	L-histidine degradation III
AQ475_RS06185	PWY-5028	L-histidine degradation II
AQ475_RS06185	PWY-5030	L-histidine degradation III
AQ475_RS06210	PWY-381	nitrate reduction II (assimilatory)
AQ475_RS06210	PWY-5675	nitrate reduction V (assimilatory)
AQ475_RS06210	PWY-6549	L-glutamine biosynthesis III
AQ475_RS06210	PWY-6963	ammonia assimilation cycle I
AQ475_RS06210	PWY-6964	ammonia assimilation cycle II
AQ475_RS06310	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AQ475_RS06345	PWY-381	nitrate reduction II (assimilatory)
AQ475_RS06345	PWY-5675	nitrate reduction V (assimilatory)
AQ475_RS06345	PWY-6549	L-glutamine biosynthesis III
AQ475_RS06345	PWY-6963	ammonia assimilation cycle I
AQ475_RS06345	PWY-6964	ammonia assimilation cycle II
AQ475_RS06440	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AQ475_RS06440	PWY-2201	folate transformations I
AQ475_RS06440	PWY-3841	folate transformations II
AQ475_RS06440	PWY-5030	L-histidine degradation III
AQ475_RS06440	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS06440	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AQ475_RS06455	PWY-6891	thiazole biosynthesis II (Bacillus)
AQ475_RS06455	PWY-6892	thiazole biosynthesis I (E. coli)
AQ475_RS06455	PWY-7560	methylerythritol phosphate pathway II
AQ475_RS06465	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AQ475_RS06465	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AQ475_RS06510	PWY-6823	molybdenum cofactor biosynthesis
AQ475_RS06510	PWY-6891	thiazole biosynthesis II (Bacillus)
AQ475_RS06510	PWY-6892	thiazole biosynthesis I (E. coli)
AQ475_RS06510	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AQ475_RS06610	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AQ475_RS06610	PWY-7177	UTP and CTP dephosphorylation II
AQ475_RS06610	PWY-7185	UTP and CTP dephosphorylation I
AQ475_RS06615	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AQ475_RS06615	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AQ475_RS06620	PWY-1042	glycolysis IV (plant cytosol)
AQ475_RS06620	PWY-1622	formaldehyde assimilation I (serine pathway)
AQ475_RS06620	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AQ475_RS06620	PWY-5484	glycolysis II (from fructose 6-phosphate)
AQ475_RS06620	PWY-5723	Rubisco shunt
AQ475_RS06620	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AQ475_RS06620	PWY-6886	1-butanol autotrophic biosynthesis
AQ475_RS06620	PWY-6901	superpathway of glucose and xylose degradation
AQ475_RS06620	PWY-7003	glycerol degradation to butanol
AQ475_RS06620	PWY-7124	ethylene biosynthesis V (engineered)
AQ475_RS06620	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AQ475_RS06680	PWY-2941	L-lysine biosynthesis II
AQ475_RS06680	PWY-2942	L-lysine biosynthesis III
AQ475_RS06680	PWY-5097	L-lysine biosynthesis VI
AQ475_RS06720	PWY-2301	<i>myo</i>-inositol biosynthesis
AQ475_RS06720	PWY-4702	phytate degradation I
AQ475_RS06720	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
AQ475_RS06725	PWY-6004	glycine betaine biosynthesis V (from glycine)
AQ475_RS06730	PWY-6936	seleno-amino acid biosynthesis
AQ475_RS06730	PWY-7274	D-cycloserine biosynthesis
AQ475_RS06770	PWY-4381	fatty acid biosynthesis initiation I
AQ475_RS06770	PWY-5743	3-hydroxypropanoate cycle
AQ475_RS06770	PWY-5744	glyoxylate assimilation
AQ475_RS06770	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AQ475_RS06770	PWY-6679	jadomycin biosynthesis
AQ475_RS06770	PWY-6722	candicidin biosynthesis
AQ475_RS06770	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AQ475_RS06780	PWY-2941	L-lysine biosynthesis II
AQ475_RS06780	PWY-2942	L-lysine biosynthesis III
AQ475_RS06780	PWY-5097	L-lysine biosynthesis VI
AQ475_RS06780	PWY-6559	spermidine biosynthesis II
AQ475_RS06780	PWY-6562	norspermidine biosynthesis
AQ475_RS06780	PWY-7153	grixazone biosynthesis
AQ475_RS06815	PWY-5340	sulfate activation for sulfonation
AQ475_RS06865	PWY-6891	thiazole biosynthesis II (Bacillus)
AQ475_RS06865	PWY-6892	thiazole biosynthesis I (E. coli)
AQ475_RS06865	PWY-7560	methylerythritol phosphate pathway II
AQ475_RS06895	PWY-5278	sulfite oxidation III
AQ475_RS06895	PWY-5340	sulfate activation for sulfonation
AQ475_RS06895	PWY-6683	sulfate reduction III (assimilatory)
AQ475_RS06895	PWY-6932	selenate reduction
AQ475_RS06910	PWY-4983	L-citrulline-nitric oxide cycle
AQ475_RS06910	PWY-4984	urea cycle
AQ475_RS06910	PWY-5	canavanine biosynthesis
AQ475_RS06910	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AQ475_RS06910	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AQ475_RS06940	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AQ475_RS06940	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AQ475_RS06940	PWY-5989	stearate biosynthesis II (bacteria and plants)
AQ475_RS06940	PWY-6113	superpathway of mycolate biosynthesis
AQ475_RS06940	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AQ475_RS06940	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AQ475_RS06940	PWY-7663	gondoate biosynthesis (anaerobic)
AQ475_RS06940	PWY-7664	oleate biosynthesis IV (anaerobic)
AQ475_RS06940	PWYG-321	mycolate biosynthesis
AQ475_RS06975	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AQ475_RS07025	PWY-6728	methylaspartate cycle
AQ475_RS07025	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AQ475_RS07025	PWY-7118	chitin degradation to ethanol
AQ475_RS07025	PWY-7294	xylose degradation IV
AQ475_RS07025	PWY-7295	L-arabinose degradation IV
AQ475_RS07030	PWY-7425	2-chloroacrylate degradation I
AQ475_RS07045	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AQ475_RS07060	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AQ475_RS07060	PWY-5368	dimorphecolate biosynthesis
AQ475_RS07060	PWY-5995	linoleate biosynthesis I (plants)
AQ475_RS07060	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AQ475_RS07060	PWY-6803	phosphatidylcholine acyl editing
AQ475_RS07060	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AQ475_RS07060	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AQ475_RS07060	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AQ475_RS07060	PWY-7470	phosphatidylcholine biosynthesis VII
AQ475_RS07060	PWY-7618	ricinoleate biosynthesis
AQ475_RS07080	PWY-6910	hydroxymethylpyrimidine salvage
AQ475_RS07080	PWY-7356	thiamin salvage IV (yeast)
AQ475_RS07080	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
AQ475_RS07090	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AQ475_RS07215	PWY-5667	CDP-diacylglycerol biosynthesis I
AQ475_RS07215	PWY-5981	CDP-diacylglycerol biosynthesis III
AQ475_RS07220	PWY-7294	xylose degradation IV
AQ475_RS07220	PWY-7295	L-arabinose degradation IV
AQ475_RS07220	PWY-7560	methylerythritol phosphate pathway II
AQ475_RS07245	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AQ475_RS07245	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AQ475_RS07245	PWY-5989	stearate biosynthesis II (bacteria and plants)
AQ475_RS07245	PWY-5994	palmitate biosynthesis I (animals and fungi)
AQ475_RS07245	PWY-6113	superpathway of mycolate biosynthesis
AQ475_RS07245	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AQ475_RS07245	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AQ475_RS07245	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AQ475_RS07245	PWY-7663	gondoate biosynthesis (anaerobic)
AQ475_RS07245	PWY-7664	oleate biosynthesis IV (anaerobic)
AQ475_RS07245	PWYG-321	mycolate biosynthesis
AQ475_RS07255	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AQ475_RS07255	PWY-622	starch biosynthesis
AQ475_RS07280	PWY-6745	phytochelatins biosynthesis
AQ475_RS07285	PWY-5484	glycolysis II (from fructose 6-phosphate)
AQ475_RS07335	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AQ475_RS07335	PWY-6596	adenosine nucleotides degradation I
AQ475_RS07335	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS07345	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS07385	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AQ475_RS07385	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AQ475_RS07395	PWY-5691	urate degradation to allantoin I
AQ475_RS07395	PWY-7394	urate degradation to allantoin II
AQ475_RS07400	PWY-5697	allantoin degradation to ureidoglycolate I (urea producing)
AQ475_RS07405	PWY-5694	allantoin degradation to glyoxylate I
AQ475_RS07405	PWY-5705	allantoin degradation to glyoxylate III
AQ475_RS07420	PWY-5691	urate degradation to allantoin I
AQ475_RS07420	PWY-7394	urate degradation to allantoin II
AQ475_RS07480	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AQ475_RS07500	PWY-7560	methylerythritol phosphate pathway II
AQ475_RS07505	PWY-7560	methylerythritol phosphate pathway II
AQ475_RS07610	PWY-6654	phosphopantothenate biosynthesis III
AQ475_RS07690	PWY-3801	sucrose degradation II (sucrose synthase)
AQ475_RS07690	PWY-5054	sorbitol biosynthesis I
AQ475_RS07690	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AQ475_RS07690	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AQ475_RS07690	PWY-5659	GDP-mannose biosynthesis
AQ475_RS07690	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AQ475_RS07690	PWY-621	sucrose degradation III (sucrose invertase)
AQ475_RS07690	PWY-622	starch biosynthesis
AQ475_RS07690	PWY-6981	chitin biosynthesis
AQ475_RS07690	PWY-6992	1,5-anhydrofructose degradation
AQ475_RS07690	PWY-7238	sucrose biosynthesis II
AQ475_RS07690	PWY-7347	sucrose biosynthesis III
AQ475_RS07690	PWY-7385	1,3-propanediol biosynthesis (engineered)
AQ475_RS07695	PWY-6938	NADH repair
AQ475_RS07710	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AQ475_RS07710	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AQ475_RS07710	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AQ475_RS07750	PWY-1361	benzoyl-CoA degradation I (aerobic)
AQ475_RS07750	PWY-5109	2-methylbutanoate biosynthesis
AQ475_RS07750	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AQ475_RS07750	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AQ475_RS07750	PWY-5177	glutaryl-CoA degradation
AQ475_RS07750	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AQ475_RS07750	PWY-6435	4-hydroxybenzoate biosynthesis V
AQ475_RS07750	PWY-6583	pyruvate fermentation to butanol I
AQ475_RS07750	PWY-6863	pyruvate fermentation to hexanol
AQ475_RS07750	PWY-6883	pyruvate fermentation to butanol II
AQ475_RS07750	PWY-6944	androstenedione degradation
AQ475_RS07750	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AQ475_RS07750	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AQ475_RS07750	PWY-7007	methyl ketone biosynthesis
AQ475_RS07750	PWY-7046	4-coumarate degradation (anaerobic)
AQ475_RS07750	PWY-7094	fatty acid salvage
AQ475_RS07750	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AQ475_RS07750	PWY-735	jasmonic acid biosynthesis
AQ475_RS07750	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AQ475_RS07750	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AQ475_RS07750	PWY-7726	AQ475_RS07750
AQ475_RS07815	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AQ475_RS07815	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AQ475_RS07815	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS07815	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AQ475_RS07815	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AQ475_RS07815	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AQ475_RS08035	PWY-6823	molybdenum cofactor biosynthesis
AQ475_RS08045	PWY-6823	molybdenum cofactor biosynthesis
AQ475_RS08125	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS08165	PWY-5381	pyridine nucleotide cycling (plants)
AQ475_RS08165	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AQ475_RS08165	PWY-6596	adenosine nucleotides degradation I
AQ475_RS08165	PWY-6606	guanosine nucleotides degradation II
AQ475_RS08165	PWY-6607	guanosine nucleotides degradation I
AQ475_RS08165	PWY-6608	guanosine nucleotides degradation III
AQ475_RS08165	PWY-7185	UTP and CTP dephosphorylation I
AQ475_RS08205	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AQ475_RS08205	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AQ475_RS08205	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AQ475_RS08205	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS08205	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AQ475_RS08205	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AQ475_RS08205	PWY-7205	CMP phosphorylation
AQ475_RS08205	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AQ475_RS08205	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS08205	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS08205	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS08205	PWY-7224	purine deoxyribonucleosides salvage
AQ475_RS08205	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AQ475_RS08205	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AQ475_RS08210	PWY-2201	folate transformations I
AQ475_RS08275	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS08335	PWY-5676	acetyl-CoA fermentation to butanoate II
AQ475_RS08335	PWY-5741	ethylmalonyl-CoA pathway
AQ475_RS08335	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AQ475_RS08365	PWY-6936	seleno-amino acid biosynthesis
AQ475_RS08415	PWY-723	alkylnitronates degradation
AQ475_RS08615	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AQ475_RS08695	PWY-6748	nitrate reduction VII (denitrification)
AQ475_RS08695	PWY-7084	nitrifier denitrification
AQ475_RS08735	PWY-6317	galactose degradation I (Leloir pathway)
AQ475_RS09025	PWY-4981	L-proline biosynthesis II (from arginine)
AQ475_RS09030	PWY-4981	L-proline biosynthesis II (from arginine)
AQ475_RS09030	PWY-4984	urea cycle
AQ475_RS09030	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AQ475_RS09075	PWY-5194	siroheme biosynthesis
AQ475_RS09075	PWY-5441	S-methyl-L-methionine cycle
AQ475_RS09075	PWY-702	L-methionine biosynthesis II
AQ475_RS09075	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AQ475_RS09090	PWY-2201	folate transformations I
AQ475_RS09090	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AQ475_RS09095	PWY-2201	folate transformations I
AQ475_RS09095	PWY-3841	folate transformations II
AQ475_RS09095	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AQ475_RS09100	PWY-6683	sulfate reduction III (assimilatory)
AQ475_RS09110	PWY-5194	siroheme biosynthesis
AQ475_RS09110	PWY-5441	S-methyl-L-methionine cycle
AQ475_RS09110	PWY-702	L-methionine biosynthesis II
AQ475_RS09110	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AQ475_RS09115	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AQ475_RS09170	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AQ475_RS09170	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AQ475_RS09170	PWY-6268	adenosylcobalamin salvage from cobalamin
AQ475_RS09170	PWY-6269	adenosylcobalamin salvage from cobinamide II
AQ475_RS09265	PWY-4261	glycerol degradation I
AQ475_RS09665	PWY-5686	UMP biosynthesis
AQ475_RS09690	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AQ475_RS09690	PWY-5723	Rubisco shunt
AQ475_RS09880	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AQ475_RS09880	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AQ475_RS09885	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AQ475_RS09890	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AQ475_RS10150	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AQ475_RS10175	PWY-7731	AQ475_RS10175
AQ475_RS10235	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AQ475_RS10235	PWY-6153	autoinducer AI-2 biosynthesis I
AQ475_RS10235	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AQ475_RS10250	PWY-3801	sucrose degradation II (sucrose synthase)
AQ475_RS10250	PWY-6527	stachyose degradation
AQ475_RS10250	PWY-7238	sucrose biosynthesis II
AQ475_RS10250	PWY-7343	UDP-glucose biosynthesis
AQ475_RS10330	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
AQ475_RS10410	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AQ475_RS10445	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AQ475_RS10445	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AQ475_RS10445	PWY-5989	stearate biosynthesis II (bacteria and plants)
AQ475_RS10445	PWY-6113	superpathway of mycolate biosynthesis
AQ475_RS10445	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AQ475_RS10445	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AQ475_RS10445	PWY-7663	gondoate biosynthesis (anaerobic)
AQ475_RS10445	PWY-7664	oleate biosynthesis IV (anaerobic)
AQ475_RS10445	PWYG-321	mycolate biosynthesis
AQ475_RS10450	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AQ475_RS10450	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AQ475_RS10450	PWY-6936	seleno-amino acid biosynthesis
AQ475_RS10450	PWY-702	L-methionine biosynthesis II
AQ475_RS10735	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AQ475_RS10860	PWY-6749	CMP-legionaminate biosynthesis I
AQ475_RS10865	PWY-6614	tetrahydrofolate biosynthesis
AQ475_RS10895	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AQ475_RS10895	PWY-5686	UMP biosynthesis
AQ475_RS10895	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AQ475_RS10905	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AQ475_RS10905	PWY-5686	UMP biosynthesis
AQ475_RS10905	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AQ475_RS10930	PWY-5386	methylglyoxal degradation I
AQ475_RS10980	PWY-5796	malonate decarboxylase activation
AQ475_RS10985	PWY-5796	malonate decarboxylase activation
AQ475_RS10990	PWY-4381	fatty acid biosynthesis initiation I
AQ475_RS10990	PWY-5743	3-hydroxypropanoate cycle
AQ475_RS10990	PWY-5744	glyoxylate assimilation
AQ475_RS10990	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AQ475_RS10990	PWY-6060	malonate degradation II (biotin-dependent)
AQ475_RS10990	PWY-6679	jadomycin biosynthesis
AQ475_RS10990	PWY-6722	candicidin biosynthesis
AQ475_RS10990	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AQ475_RS10995	PWY-4381	fatty acid biosynthesis initiation I
AQ475_RS10995	PWY-5743	3-hydroxypropanoate cycle
AQ475_RS10995	PWY-5744	glyoxylate assimilation
AQ475_RS10995	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AQ475_RS10995	PWY-6060	malonate degradation II (biotin-dependent)
AQ475_RS10995	PWY-6679	jadomycin biosynthesis
AQ475_RS10995	PWY-6722	candicidin biosynthesis
AQ475_RS10995	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AQ475_RS11005	PWY-5794	malonate degradation I (biotin-independent)
AQ475_RS11005	PWY-6060	malonate degradation II (biotin-dependent)
AQ475_RS11025	PWY-1361	benzoyl-CoA degradation I (aerobic)
AQ475_RS11025	PWY-5109	2-methylbutanoate biosynthesis
AQ475_RS11025	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AQ475_RS11025	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AQ475_RS11025	PWY-5177	glutaryl-CoA degradation
AQ475_RS11025	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AQ475_RS11025	PWY-6435	4-hydroxybenzoate biosynthesis V
AQ475_RS11025	PWY-6583	pyruvate fermentation to butanol I
AQ475_RS11025	PWY-6863	pyruvate fermentation to hexanol
AQ475_RS11025	PWY-6883	pyruvate fermentation to butanol II
AQ475_RS11025	PWY-6944	androstenedione degradation
AQ475_RS11025	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AQ475_RS11025	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AQ475_RS11025	PWY-7007	methyl ketone biosynthesis
AQ475_RS11025	PWY-7046	4-coumarate degradation (anaerobic)
AQ475_RS11025	PWY-7094	fatty acid salvage
AQ475_RS11025	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AQ475_RS11025	PWY-735	jasmonic acid biosynthesis
AQ475_RS11025	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AQ475_RS11025	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AQ475_RS11025	PWY-7726	AQ475_RS11025
AQ475_RS11030	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AQ475_RS11220	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
AQ475_RS11300	PWY-5331	taurine biosynthesis
AQ475_RS11370	PWY-3781	aerobic respiration I (cytochrome c)
AQ475_RS11370	PWY-4521	arsenite oxidation I (respiratory)
AQ475_RS11370	PWY-6692	Fe(II) oxidation
AQ475_RS11370	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AQ475_RS11595	PWY-3781	aerobic respiration I (cytochrome c)
AQ475_RS11595	PWY-4302	aerobic respiration III (alternative oxidase pathway)
AQ475_RS11595	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AQ475_RS11595	PWY-6692	Fe(II) oxidation
AQ475_RS11670	PWY-1042	glycolysis IV (plant cytosol)
AQ475_RS11670	PWY-5484	glycolysis II (from fructose 6-phosphate)
AQ475_RS11670	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AQ475_RS11670	PWY-7003	glycerol degradation to butanol
AQ475_RS11705	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AQ475_RS11705	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AQ475_RS11705	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AQ475_RS11705	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AQ475_RS11715	PWY-6871	3-methylbutanol biosynthesis
AQ475_RS11720	PWY-5669	phosphatidylethanolamine biosynthesis I
AQ475_RS11725	PWY-5669	phosphatidylethanolamine biosynthesis I
AQ475_RS11730	PWY-5103	L-isoleucine biosynthesis III
AQ475_RS11730	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AQ475_RS11735	PWY-5101	L-isoleucine biosynthesis II
AQ475_RS11735	PWY-5103	L-isoleucine biosynthesis III
AQ475_RS11735	PWY-5104	L-isoleucine biosynthesis IV
AQ475_RS11735	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AQ475_RS11735	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AQ475_RS11735	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AQ475_RS11735	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AQ475_RS11740	PWY-5101	L-isoleucine biosynthesis II
AQ475_RS11740	PWY-5103	L-isoleucine biosynthesis III
AQ475_RS11740	PWY-5104	L-isoleucine biosynthesis IV
AQ475_RS11740	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AQ475_RS11740	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AQ475_RS11740	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AQ475_RS11740	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AQ475_RS11775	PWY-7039	phosphatidate metabolism, as a signaling molecule
AQ475_RS11805	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AQ475_RS11895	PWY-7183	pyrimidine nucleobases salvage I
AQ475_RS11905	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AQ475_RS11905	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AQ475_RS11905	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AQ475_RS11910	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AQ475_RS11910	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AQ475_RS11915	PWY-5381	pyridine nucleotide cycling (plants)
AQ475_RS11915	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AQ475_RS11925	PWY-6825	phosphatidylcholine biosynthesis V
AQ475_RS12170	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AQ475_RS12170	PWY-5723	Rubisco shunt
AQ475_RS12200	PWY-5755	4-hydroxybenzoate biosynthesis II (microbes)
AQ475_RS12200	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
AQ475_RS12200	PWY-6148	tetrahydromethanopterin biosynthesis
AQ475_RS12895	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AQ475_RS12895	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AQ475_RS12900	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AQ475_RS12900	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AQ475_RS12905	PWY-1622	formaldehyde assimilation I (serine pathway)
AQ475_RS12905	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AQ475_RS12905	PWY-5913	TCA cycle VI (obligate autotrophs)
AQ475_RS12905	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AQ475_RS12905	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AQ475_RS12905	PWY-6549	L-glutamine biosynthesis III
AQ475_RS12905	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AQ475_RS12905	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AQ475_RS12905	PWY-7124	ethylene biosynthesis V (engineered)
AQ475_RS12940	PWY-4983	L-citrulline-nitric oxide cycle
AQ475_RS12940	PWY-4984	urea cycle
AQ475_RS12940	PWY-5	canavanine biosynthesis
AQ475_RS12940	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AQ475_RS12940	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AQ475_RS12960	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS12965	PWY-6854	ethylene biosynthesis III (microbes)
AQ475_RS13025	PWY-5155	&beta;-alanine biosynthesis III
AQ475_RS13045	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AQ475_RS13045	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AQ475_RS13045	PWY-6269	adenosylcobalamin salvage from cobinamide II
AQ475_RS13055	PWY-5443	aminopropanol phosphate biosynthesis I
AQ475_RS13065	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AQ475_RS13065	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AQ475_RS13065	PWY-6269	adenosylcobalamin salvage from cobinamide II
AQ475_RS13070	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AQ475_RS13070	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AQ475_RS13070	PWY-6269	adenosylcobalamin salvage from cobinamide II
AQ475_RS13075	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AQ475_RS13075	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AQ475_RS13075	PWY-6269	adenosylcobalamin salvage from cobinamide II
AQ475_RS13100	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
AQ475_RS13100	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
AQ475_RS13130	PWY-5101	L-isoleucine biosynthesis II
AQ475_RS13130	PWY-5103	L-isoleucine biosynthesis III
AQ475_RS13130	PWY-5104	L-isoleucine biosynthesis IV
AQ475_RS13130	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AQ475_RS13165	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AQ475_RS13170	PWY-5194	siroheme biosynthesis
AQ475_RS13170	PWY-5441	S-methyl-L-methionine cycle
AQ475_RS13170	PWY-702	L-methionine biosynthesis II
AQ475_RS13170	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AQ475_RS13175	PWY-5278	sulfite oxidation III
AQ475_RS13175	PWY-5340	sulfate activation for sulfonation
AQ475_RS13175	PWY-6683	sulfate reduction III (assimilatory)
AQ475_RS13175	PWY-6932	selenate reduction
AQ475_RS13180	PWY-5278	sulfite oxidation III
AQ475_RS13180	PWY-5340	sulfate activation for sulfonation
AQ475_RS13180	PWY-6683	sulfate reduction III (assimilatory)
AQ475_RS13180	PWY-6932	selenate reduction
AQ475_RS13195	PWY-6683	sulfate reduction III (assimilatory)
AQ475_RS13415	PWY-5316	nicotine biosynthesis
AQ475_RS13415	PWY-7342	superpathway of nicotine biosynthesis
AQ475_RS13420	PWY-5316	nicotine biosynthesis
AQ475_RS13420	PWY-5381	pyridine nucleotide cycling (plants)
AQ475_RS13420	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
AQ475_RS13420	PWY-7342	superpathway of nicotine biosynthesis
AQ475_RS13425	PWY-5316	nicotine biosynthesis
AQ475_RS13425	PWY-7342	superpathway of nicotine biosynthesis
AQ475_RS13440	PWY-6825	phosphatidylcholine biosynthesis V
AQ475_RS13445	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AQ475_RS13445	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AQ475_RS13450	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AQ475_RS13450	PWY-6167	flavin biosynthesis II (archaea)
AQ475_RS13450	PWY-6168	flavin biosynthesis III (fungi)
AQ475_RS13470	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AQ475_RS13470	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AQ475_RS13470	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AQ475_RS13470	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AQ475_RS13510	PWY-5913	TCA cycle VI (obligate autotrophs)
AQ475_RS13510	PWY-6549	L-glutamine biosynthesis III
AQ475_RS13510	PWY-6728	methylaspartate cycle
AQ475_RS13510	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AQ475_RS13510	PWY-7124	ethylene biosynthesis V (engineered)
AQ475_RS13510	PWY-7254	TCA cycle VII (acetate-producers)
AQ475_RS13510	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AQ475_RS13575	PWY-6654	phosphopantothenate biosynthesis III
AQ475_RS13605	PWY-6854	ethylene biosynthesis III (microbes)
AQ475_RS13625	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AQ475_RS13630	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS13660	PWY-4981	L-proline biosynthesis II (from arginine)
AQ475_RS13660	PWY-4984	urea cycle
AQ475_RS13660	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AQ475_RS13665	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AQ475_RS13665	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AQ475_RS13700	PWY-6700	queuosine biosynthesis
AQ475_RS13735	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AQ475_RS13735	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AQ475_RS13770	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AQ475_RS13770	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AQ475_RS13770	PWY-7717	AQ475_RS13770
AQ475_RS13770	PWY-7733	AQ475_RS13770
AQ475_RS13770	PWY-7734	AQ475_RS13770
AQ475_RS13775	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AQ475_RS13775	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AQ475_RS13800	PWY-6654	phosphopantothenate biosynthesis III
AQ475_RS13820	PWY-6531	mannitol cycle
AQ475_RS13825	PWY-4261	glycerol degradation I
AQ475_RS13915	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AQ475_RS13920	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AQ475_RS13920	PWY-3162	L-tryptophan degradation V (side chain pathway)
AQ475_RS13920	PWY-5057	L-valine degradation II
AQ475_RS13920	PWY-5076	L-leucine degradation III
AQ475_RS13920	PWY-5078	L-isoleucine degradation II
AQ475_RS13920	PWY-5079	L-phenylalanine degradation III
AQ475_RS13920	PWY-5082	L-methionine degradation III
AQ475_RS13920	PWY-5480	pyruvate fermentation to ethanol I
AQ475_RS13920	PWY-5486	pyruvate fermentation to ethanol II
AQ475_RS13920	PWY-5751	phenylethanol biosynthesis
AQ475_RS13920	PWY-6313	serotonin degradation
AQ475_RS13920	PWY-6333	acetaldehyde biosynthesis I
AQ475_RS13920	PWY-6342	noradrenaline and adrenaline degradation
AQ475_RS13920	PWY-6454	vancomycin resistance I
AQ475_RS13920	PWY-6587	pyruvate fermentation to ethanol III
AQ475_RS13920	PWY-6802	salidroside biosynthesis
AQ475_RS13920	PWY-6871	3-methylbutanol biosynthesis
AQ475_RS13920	PWY-6901	superpathway of glucose and xylose degradation
AQ475_RS13920	PWY-7013	L-1,2-propanediol degradation
AQ475_RS13920	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AQ475_RS13920	PWY-7118	chitin degradation to ethanol
AQ475_RS13920	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AQ475_RS13930	PWY-4261	glycerol degradation I
AQ475_RS13990	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AQ475_RS13990	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AQ475_RS14015	PWY-6123	inosine-5'-phosphate biosynthesis I
AQ475_RS14015	PWY-7234	inosine-5'-phosphate biosynthesis III
AQ475_RS14020	PWY-6123	inosine-5'-phosphate biosynthesis I
AQ475_RS14020	PWY-6124	inosine-5'-phosphate biosynthesis II
AQ475_RS14020	PWY-7234	inosine-5'-phosphate biosynthesis III
AQ475_RS14025	PWY-1042	glycolysis IV (plant cytosol)
AQ475_RS14025	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AQ475_RS14025	PWY-5484	glycolysis II (from fructose 6-phosphate)
AQ475_RS14025	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AQ475_RS14025	PWY-7385	1,3-propanediol biosynthesis (engineered)
AQ475_RS14030	PWY-1042	glycolysis IV (plant cytosol)
AQ475_RS14030	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AQ475_RS14030	PWY-5484	glycolysis II (from fructose 6-phosphate)
AQ475_RS14030	PWY-5723	Rubisco shunt
AQ475_RS14030	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AQ475_RS14030	PWY-6886	1-butanol autotrophic biosynthesis
AQ475_RS14030	PWY-6901	superpathway of glucose and xylose degradation
AQ475_RS14030	PWY-7003	glycerol degradation to butanol
AQ475_RS14030	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AQ475_RS14030	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AQ475_RS14035	PWY-1042	glycolysis IV (plant cytosol)
AQ475_RS14035	PWY-5484	glycolysis II (from fructose 6-phosphate)
AQ475_RS14035	PWY-6886	1-butanol autotrophic biosynthesis
AQ475_RS14035	PWY-6901	superpathway of glucose and xylose degradation
AQ475_RS14035	PWY-7003	glycerol degradation to butanol
AQ475_RS14050	PWY-5057	L-valine degradation II
AQ475_RS14050	PWY-5076	L-leucine degradation III
AQ475_RS14050	PWY-5078	L-isoleucine degradation II
AQ475_RS14050	PWY-5101	L-isoleucine biosynthesis II
AQ475_RS14050	PWY-5103	L-isoleucine biosynthesis III
AQ475_RS14050	PWY-5104	L-isoleucine biosynthesis IV
AQ475_RS14050	PWY-5108	L-isoleucine biosynthesis V
AQ475_RS14115	PWY-5392	reductive TCA cycle II
AQ475_RS14115	PWY-5537	pyruvate fermentation to acetate V
AQ475_RS14115	PWY-5538	pyruvate fermentation to acetate VI
AQ475_RS14115	PWY-5690	TCA cycle II (plants and fungi)
AQ475_RS14115	PWY-5913	TCA cycle VI (obligate autotrophs)
AQ475_RS14115	PWY-6728	methylaspartate cycle
AQ475_RS14115	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AQ475_RS14115	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AQ475_RS14120	PWY-5392	reductive TCA cycle II
AQ475_RS14120	PWY-5537	pyruvate fermentation to acetate V
AQ475_RS14120	PWY-5538	pyruvate fermentation to acetate VI
AQ475_RS14120	PWY-5690	TCA cycle II (plants and fungi)
AQ475_RS14120	PWY-5913	TCA cycle VI (obligate autotrophs)
AQ475_RS14120	PWY-6728	methylaspartate cycle
AQ475_RS14120	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
AQ475_RS14120	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
AQ475_RS14215	PWY-5381	pyridine nucleotide cycling (plants)
AQ475_RS14290	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
AQ475_RS14295	PWY-1042	glycolysis IV (plant cytosol)
AQ475_RS14295	PWY-1622	formaldehyde assimilation I (serine pathway)
AQ475_RS14295	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AQ475_RS14295	PWY-5484	glycolysis II (from fructose 6-phosphate)
AQ475_RS14295	PWY-5723	Rubisco shunt
AQ475_RS14295	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AQ475_RS14295	PWY-6886	1-butanol autotrophic biosynthesis
AQ475_RS14295	PWY-6901	superpathway of glucose and xylose degradation
AQ475_RS14295	PWY-7003	glycerol degradation to butanol
AQ475_RS14295	PWY-7124	ethylene biosynthesis V (engineered)
AQ475_RS14295	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AQ475_RS14335	PWY-4041	&gamma;-glutamyl cycle
AQ475_RS14335	PWY-5826	hypoglycin biosynthesis
AQ475_RS14355	PWY-4261	glycerol degradation I
AQ475_RS14355	PWY-6118	glycerol-3-phosphate shuttle
AQ475_RS14355	PWY-6952	glycerophosphodiester degradation
AQ475_RS14360	PWY-4261	glycerol degradation I
AQ475_RS14380	PWY-6167	flavin biosynthesis II (archaea)
AQ475_RS14380	PWY-6168	flavin biosynthesis III (fungi)
AQ475_RS14455	PWY-5386	methylglyoxal degradation I
AQ475_RS14470	PWY-7294	xylose degradation IV
AQ475_RS14470	PWY-7295	L-arabinose degradation IV
AQ475_RS14525	PWY-1361	benzoyl-CoA degradation I (aerobic)
AQ475_RS14525	PWY-5109	2-methylbutanoate biosynthesis
AQ475_RS14525	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AQ475_RS14525	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AQ475_RS14525	PWY-5177	glutaryl-CoA degradation
AQ475_RS14525	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AQ475_RS14525	PWY-6435	4-hydroxybenzoate biosynthesis V
AQ475_RS14525	PWY-6583	pyruvate fermentation to butanol I
AQ475_RS14525	PWY-6863	pyruvate fermentation to hexanol
AQ475_RS14525	PWY-6883	pyruvate fermentation to butanol II
AQ475_RS14525	PWY-6944	androstenedione degradation
AQ475_RS14525	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AQ475_RS14525	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AQ475_RS14525	PWY-7007	methyl ketone biosynthesis
AQ475_RS14525	PWY-7046	4-coumarate degradation (anaerobic)
AQ475_RS14525	PWY-7094	fatty acid salvage
AQ475_RS14525	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AQ475_RS14525	PWY-735	jasmonic acid biosynthesis
AQ475_RS14525	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AQ475_RS14525	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AQ475_RS14525	PWY-7726	AQ475_RS14525
AQ475_RS14545	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AQ475_RS14585	PWY-5839	menaquinol-7 biosynthesis
AQ475_RS14585	PWY-5844	menaquinol-9 biosynthesis
AQ475_RS14585	PWY-5849	menaquinol-6 biosynthesis
AQ475_RS14585	PWY-5890	menaquinol-10 biosynthesis
AQ475_RS14585	PWY-5891	menaquinol-11 biosynthesis
AQ475_RS14585	PWY-5892	menaquinol-12 biosynthesis
AQ475_RS14585	PWY-5895	menaquinol-13 biosynthesis
AQ475_RS14610	PWY-6700	queuosine biosynthesis
AQ475_RS14630	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AQ475_RS14675	PWY-6655	xanthan biosynthesis
AQ475_RS14675	PWY-6658	acetan biosynthesis
AQ475_RS14740	PWY-5659	GDP-mannose biosynthesis
AQ475_RS14740	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AQ475_RS14770	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
AQ475_RS14770	PWY-581	indole-3-acetate biosynthesis II
AQ475_RS14770	PWY-7308	acrylonitrile degradation I
AQ475_RS14775	PWY-5025	indole-3-acetate biosynthesis IV (bacteria)
AQ475_RS14775	PWY-581	indole-3-acetate biosynthesis II
AQ475_RS14775	PWY-7308	acrylonitrile degradation I
AQ475_RS14995	PWY-2201	folate transformations I
AQ475_RS14995	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS15010	PWY-6605	adenine and adenosine salvage II
AQ475_RS15010	PWY-6610	adenine and adenosine salvage IV
AQ475_RS15025	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AQ475_RS15025	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AQ475_RS15095	PWY-7560	methylerythritol phosphate pathway II
AQ475_RS15115	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
AQ475_RS15135	PWY-6825	phosphatidylcholine biosynthesis V
AQ475_RS15155	PWY-6683	sulfate reduction III (assimilatory)
AQ475_RS15185	PWY-6871	3-methylbutanol biosynthesis
AQ475_RS15220	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
AQ475_RS15235	PWY-6902	chitin degradation II
AQ475_RS15260	PWY-6906	chitin derivatives degradation
AQ475_RS15260	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AQ475_RS15260	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AQ475_RS15365	PWY-3781	aerobic respiration I (cytochrome c)
AQ475_RS15365	PWY-4521	arsenite oxidation I (respiratory)
AQ475_RS15365	PWY-6692	Fe(II) oxidation
AQ475_RS15365	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AQ475_RS15380	PWY-2201	folate transformations I
AQ475_RS15380	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AQ475_RS15390	PWY-6004	glycine betaine biosynthesis V (from glycine)
AQ475_RS15400	PWY-5667	CDP-diacylglycerol biosynthesis I
AQ475_RS15400	PWY-5981	CDP-diacylglycerol biosynthesis III
AQ475_RS15420	PWY-1622	formaldehyde assimilation I (serine pathway)
AQ475_RS15420	PWY-5484	glycolysis II (from fructose 6-phosphate)
AQ475_RS15540	PWY-1361	benzoyl-CoA degradation I (aerobic)
AQ475_RS15540	PWY-5109	2-methylbutanoate biosynthesis
AQ475_RS15540	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
AQ475_RS15540	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
AQ475_RS15540	PWY-5177	glutaryl-CoA degradation
AQ475_RS15540	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AQ475_RS15540	PWY-6435	4-hydroxybenzoate biosynthesis V
AQ475_RS15540	PWY-6583	pyruvate fermentation to butanol I
AQ475_RS15540	PWY-6863	pyruvate fermentation to hexanol
AQ475_RS15540	PWY-6883	pyruvate fermentation to butanol II
AQ475_RS15540	PWY-6944	androstenedione degradation
AQ475_RS15540	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
AQ475_RS15540	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
AQ475_RS15540	PWY-7007	methyl ketone biosynthesis
AQ475_RS15540	PWY-7046	4-coumarate degradation (anaerobic)
AQ475_RS15540	PWY-7094	fatty acid salvage
AQ475_RS15540	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
AQ475_RS15540	PWY-735	jasmonic acid biosynthesis
AQ475_RS15540	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
AQ475_RS15540	PWY-7606	docosahexaenoate biosynthesis III (mammals)
AQ475_RS15540	PWY-7726	AQ475_RS15540
AQ475_RS15555	PWY-4041	&gamma;-glutamyl cycle
AQ475_RS15555	PWY-5826	hypoglycin biosynthesis
AQ475_RS15570	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AQ475_RS15570	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AQ475_RS15575	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
AQ475_RS15575	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
AQ475_RS15600	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AQ475_RS15600	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AQ475_RS15655	PWY-3961	phosphopantothenate biosynthesis II
AQ475_RS15715	PWY-2201	folate transformations I
AQ475_RS15715	PWY-3841	folate transformations II
AQ475_RS15780	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AQ475_RS15780	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AQ475_RS15780	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AQ475_RS15780	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AQ475_RS15810	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AQ475_RS15810	PWY-6578	8-amino-7-oxononanoate biosynthesis III
AQ475_RS15810	PWY-7147	8-amino-7-oxononanoate biosynthesis II
AQ475_RS15815	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AQ475_RS15820	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AQ475_RS15835	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AQ475_RS15835	PWY-5491	diethylphosphate degradation
AQ475_RS15840	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AQ475_RS15840	PWY-5491	diethylphosphate degradation
AQ475_RS15965	PWY-2941	L-lysine biosynthesis II
AQ475_RS15965	PWY-2942	L-lysine biosynthesis III
AQ475_RS15965	PWY-5097	L-lysine biosynthesis VI
AQ475_RS16015	PWY-5074	mevalonate degradation
AQ475_RS16045	PWY-723	alkylnitronates degradation
AQ475_RS16115	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
AQ475_RS16115	PWY-6148	tetrahydromethanopterin biosynthesis
AQ475_RS16115	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
AQ475_RS16115	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AQ475_RS16125	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AQ475_RS16125	PWY-5667	CDP-diacylglycerol biosynthesis I
AQ475_RS16125	PWY-6453	stigma estolide biosynthesis
AQ475_RS16125	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AQ475_RS16125	PWY-7587	oleate biosynthesis III (cyanobacteria)
AQ475_RS16130	PWY-6749	CMP-legionaminate biosynthesis I
AQ475_RS16190	PWY-4983	L-citrulline-nitric oxide cycle
AQ475_RS16190	PWY-4984	urea cycle
AQ475_RS16190	PWY-5	canavanine biosynthesis
AQ475_RS16190	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AQ475_RS16190	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AQ475_RS16270	PWY-4081	glutathione redox reactions I
AQ475_RS16300	PWY-5129	sphingolipid biosynthesis (plants)
AQ475_RS16630	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AQ475_RS16645	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
AQ475_RS16645	PWY-7494	choline degradation IV
AQ475_RS16665	PWY-6497	D-galactarate degradation II
AQ475_RS16670	PWY-1042	glycolysis IV (plant cytosol)
AQ475_RS16670	PWY-1622	formaldehyde assimilation I (serine pathway)
AQ475_RS16670	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AQ475_RS16670	PWY-5484	glycolysis II (from fructose 6-phosphate)
AQ475_RS16670	PWY-5723	Rubisco shunt
AQ475_RS16670	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AQ475_RS16670	PWY-6499	D-glucarate degradation II
AQ475_RS16670	PWY-6886	1-butanol autotrophic biosynthesis
AQ475_RS16670	PWY-6901	superpathway of glucose and xylose degradation
AQ475_RS16670	PWY-7003	glycerol degradation to butanol
AQ475_RS16670	PWY-7124	ethylene biosynthesis V (engineered)
AQ475_RS16670	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AQ475_RS16690	PWY-6486	D-galacturonate degradation II
AQ475_RS16690	PWY-6497	D-galactarate degradation II
AQ475_RS16690	PWY-6499	D-glucarate degradation II
AQ475_RS16690	PWY-6501	D-glucuronate degradation II
AQ475_RS16750	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AQ475_RS16750	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AQ475_RS16760	PWY-2941	L-lysine biosynthesis II
AQ475_RS16760	PWY-5097	L-lysine biosynthesis VI
AQ475_RS16815	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AQ475_RS16815	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AQ475_RS16830	PWY-5344	L-homocysteine biosynthesis
AQ475_RS16875	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AQ475_RS16925	PWY-6703	preQ<sub>0</sub> biosynthesis
AQ475_RS16930	PWY-6703	preQ<sub>0</sub> biosynthesis
AQ475_RS16955	PWY-6825	phosphatidylcholine biosynthesis V
AQ475_RS17050	PWY-6840	homoglutathione biosynthesis
AQ475_RS17050	PWY-7255	ergothioneine biosynthesis I (bacteria)
AQ475_RS19930	PWY-1281	sulfoacetaldehyde degradation I
AQ475_RS19930	PWY-5482	pyruvate fermentation to acetate II
AQ475_RS19930	PWY-5485	pyruvate fermentation to acetate IV
AQ475_RS19930	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS19930	PWY-6637	sulfolactate degradation II
AQ475_RS20810	PWY-2201	folate transformations I
AQ475_RS20810	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS22960	PWY-3781	aerobic respiration I (cytochrome c)
AQ475_RS22960	PWY-4521	arsenite oxidation I (respiratory)
AQ475_RS22960	PWY-6692	Fe(II) oxidation
AQ475_RS22960	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
AQ475_RS23260	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AQ475_RS23260	PWY-2201	folate transformations I
AQ475_RS23260	PWY-3841	folate transformations II
AQ475_RS23260	PWY-5030	L-histidine degradation III
AQ475_RS23260	PWY-5497	purine nucleobases degradation II (anaerobic)
AQ475_RS23260	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AQ475_RS27280	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AQ475_RS28085	PWY-6871	3-methylbutanol biosynthesis
