A4V04_RS00005 SM00271 DnaJ molecular chaperone homology domain A4V04_RS00025 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS00045 SM00937 A4V04_RS00045 A4V04_RS00065 SM00382 ATPases associated with a variety of cellular activities A4V04_RS00090 SM00954 Region found in RelA / SpoT proteins A4V04_RS00140 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS00155 SM00422 helix_turn_helix, mercury resistance A4V04_RS00160 SM00411 bacterial (prokaryotic) histone like domain A4V04_RS00165 SM00873 B3/4 domain A4V04_RS00165 SM00874 tRNA synthetase B5 domain A4V04_RS00165 SM00896 Ferredoxin-fold anticodon binding domain A4V04_RS00190 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4V04_RS00205 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS00220 SM00257 Lysin motif A4V04_RS00245 SM00562 A4V04_RS00245 A4V04_RS00250 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS00275 SM00564 beta-propeller repeat A4V04_RS00295 SM00244 prohibitin homologues A4V04_RS00300 SM00244 prohibitin homologues A4V04_RS00315 SM00788 Adenylosuccinate synthetase A4V04_RS00330 SM00852 Probable molybdopterin binding domain A4V04_RS00340 SM00382 ATPases associated with a variety of cellular activities A4V04_RS00340 SM01086 C-terminal, D2-small domain, of ClpB protein A4V04_RS00670 SM00460 Transglutaminase/protease-like homologues A4V04_RS00730 SM00100 Cyclic nucleotide-monophosphate binding domain A4V04_RS00730 SM00419 helix_turn_helix, cAMP Regulatory protein A4V04_RS00735 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS00740 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4V04_RS00790 SM00357 Cold shock protein domain A4V04_RS00800 SM00382 ATPases associated with a variety of cellular activities A4V04_RS00800 SM01086 C-terminal, D2-small domain, of ClpB protein A4V04_RS00825 SM00904 Riboflavin kinase A4V04_RS00875 SM00400 zinc finger A4V04_RS00875 SM00493 A4V04_RS00875 A4V04_RS00900 SM01131 A4V04_RS00900 A4V04_RS00920 SM00938 Nitrogen regulatory protein P-II A4V04_RS00925 SM00463 Small MutS-related domain A4V04_RS00935 SM00843 A4V04_RS00935 A4V04_RS00975 SM00646 A4V04_RS00975 A4V04_RS01035 SM00363 S4 RNA-binding domain A4V04_RS01050 SM01001 AIR carboxylase A4V04_RS01090 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A4V04_RS01125 SM00479 A4V04_RS01125 A4V04_RS01170 SM00382 ATPases associated with a variety of cellular activities A4V04_RS01195 SM00257 Lysin motif A4V04_RS01285 SM00382 ATPases associated with a variety of cellular activities A4V04_RS01345 SM00984 UDP binding domain A4V04_RS01460 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS01465 SM00434 DNA Topoisomerase IV A4V04_RS01475 SM00830 Chorismate mutase type II A4V04_RS01500 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS01505 SM00411 bacterial (prokaryotic) histone like domain A4V04_RS01535 SM00487 DEAD-like helicases superfamily A4V04_RS01535 SM00490 helicase superfamily c-terminal domain A4V04_RS01540 SM00479 A4V04_RS01540 A4V04_RS01550 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS01555 SM00900 A4V04_RS01555 A4V04_RS01560 SM00422 helix_turn_helix, mercury resistance A4V04_RS01665 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS01680 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4V04_RS01855 SM00327 von Willebrand factor (vWF) type A domain A4V04_RS01870 SM00778 Zinc-binding domain of primase-helicase A4V04_RS01930 SM00382 ATPases associated with a variety of cellular activities A4V04_RS01960 SM00387 Histidine kinase-like ATPases A4V04_RS01960 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS01965 SM00421 helix_turn_helix, Lux Regulon A4V04_RS01965 SM00448 cheY-homologous receiver domain A4V04_RS01980 SM00869 Autotransporter beta-domain A4V04_RS02055 SM00954 Region found in RelA / SpoT proteins A4V04_RS02130 SM00421 helix_turn_helix, Lux Regulon A4V04_RS02130 SM00448 cheY-homologous receiver domain A4V04_RS02135 SM00387 Histidine kinase-like ATPases A4V04_RS02135 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS02140 SM00900 A4V04_RS02140 A4V04_RS02170 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS02200 SM01126 A4V04_RS02200 A4V04_RS02260 SM00998 Adenylosuccinate lyase C-terminus A4V04_RS02285 SM00506 Appr-1"-p processing enzyme A4V04_RS02320 SM00869 Autotransporter beta-domain A4V04_RS02335 SM00421 helix_turn_helix, Lux Regulon A4V04_RS02335 SM00448 cheY-homologous receiver domain A4V04_RS02340 SM00387 Histidine kinase-like ATPases A4V04_RS02340 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS02350 SM00387 Histidine kinase-like ATPases A4V04_RS02355 SM00421 helix_turn_helix, Lux Regulon A4V04_RS02355 SM00448 cheY-homologous receiver domain A4V04_RS02400 SM00895 A4V04_RS02400 A4V04_RS02605 SM00869 Autotransporter beta-domain A4V04_RS02635 SM00387 Histidine kinase-like ATPases A4V04_RS02635 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS02635 SM00448 cheY-homologous receiver domain A4V04_RS02660 SM00382 ATPases associated with a variety of cellular activities A4V04_RS02660 SM00487 DEAD-like helicases superfamily A4V04_RS02660 SM00490 helicase superfamily c-terminal domain A4V04_RS02660 SM00847 Helicase associated domain (HA2) Add an annotation A4V04_RS02670 SM00479 A4V04_RS02670 A4V04_RS02675 SM00363 S4 RNA-binding domain A4V04_RS02685 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS02685 SM00322 K homology RNA-binding domain A4V04_RS02705 SM00838 Elongation factor G C-terminus A4V04_RS02755 SM00869 Autotransporter beta-domain A4V04_RS02770 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS02775 SM00363 S4 RNA-binding domain A4V04_RS02805 SM00869 Autotransporter beta-domain A4V04_RS02810 SM00869 Autotransporter beta-domain A4V04_RS02850 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A4V04_RS02855 SM00822 A4V04_RS02855 A4V04_RS02860 SM00823 Phosphopantetheine attachment site A4V04_RS02865 SM00825 Beta-ketoacyl synthase A4V04_RS02870 SM00838 Elongation factor G C-terminus A4V04_RS02880 SM00358 Double-stranded RNA binding motif A4V04_RS02880 SM00535 Ribonuclease III family A4V04_RS02910 SM00670 Large family of predicted nucleotide-binding domains A4V04_RS02950 SM00861 Transketolase, pyrimidine binding domain A4V04_RS02970 SM00487 DEAD-like helicases superfamily A4V04_RS02970 SM00491 A4V04_RS02970 A4V04_RS02985 SM00363 S4 RNA-binding domain A4V04_RS03000 SM00450 Rhodanese Homology Domain A4V04_RS03005 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS03050 SM00387 Histidine kinase-like ATPases A4V04_RS03050 SM00433 TopoisomeraseII A4V04_RS03055 SM00434 DNA Topoisomerase IV A4V04_RS03110 SM00387 Histidine kinase-like ATPases A4V04_RS03120 SM00478 endonuclease III A4V04_RS03120 SM00525 A4V04_RS03120 A4V04_RS03175 SM01192 A4V04_RS03175 A4V04_RS03175 SM01193 A4V04_RS03175 A4V04_RS03185 SM01005 Alanine racemase, C-terminal domain A4V04_RS03200 SM00481 DNA polymerase alpha chain like domain A4V04_RS03220 SM01130 A4V04_RS03220 A4V04_RS03260 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A4V04_RS03260 SM00534 ATPase domain of DNA mismatch repair MUTS family A4V04_RS03305 SM00318 Staphylococcal nuclease homologues A4V04_RS03320 SM00841 Elongation factor P, C-terminal A4V04_RS03320 SM01185 A4V04_RS03320 A4V04_RS03330 SM00465 GIY-YIG type nucleases (URI domain) A4V04_RS03375 SM00382 ATPases associated with a variety of cellular activities A4V04_RS03400 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS03400 SM01091 Transporter associated domain A4V04_RS03415 SM00870 A4V04_RS03415 A4V04_RS03455 SM01329 A4V04_RS03455 A4V04_RS03460 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4V04_RS03520 SM00900 A4V04_RS03520 A4V04_RS03575 SM00893 Electron transfer flavoprotein domain A4V04_RS03580 SM00893 Electron transfer flavoprotein domain A4V04_RS03630 SM00479 A4V04_RS03630 A4V04_RS03665 SM00387 Histidine kinase-like ATPases A4V04_RS03665 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS03670 SM00421 helix_turn_helix, Lux Regulon A4V04_RS03670 SM00448 cheY-homologous receiver domain A4V04_RS03700 SM00881 CoA binding domain A4V04_RS03705 SM00411 bacterial (prokaryotic) histone like domain A4V04_RS03755 SM00382 ATPases associated with a variety of cellular activities A4V04_RS03785 SM00342 helix_turn_helix, arabinose operon control protein A4V04_RS03800 SM00478 endonuclease III A4V04_RS03825 SM00917 LeuA allosteric (dimerisation) domain A4V04_RS03850 SM01387 A4V04_RS03850 A4V04_RS03855 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS03855 SM00322 K homology RNA-binding domain A4V04_RS03860 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS03955 SM00900 A4V04_RS03955 A4V04_RS03990 SM00346 helix_turn_helix isocitrate lyase regulation A4V04_RS04035 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4V04_RS04035 SM00382 ATPases associated with a variety of cellular activities A4V04_RS04130 SM00671 Sel1-like repeats. A4V04_RS04195 SM00938 Nitrogen regulatory protein P-II A4V04_RS04250 SM00422 helix_turn_helix, mercury resistance A4V04_RS04265 SM00671 Sel1-like repeats. A4V04_RS04305 SM00382 ATPases associated with a variety of cellular activities A4V04_RS04315 SM00870 A4V04_RS04315 A4V04_RS04415 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS04445 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS04485 SM00422 helix_turn_helix, mercury resistance A4V04_RS04495 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4V04_RS04545 SM00671 Sel1-like repeats. A4V04_RS04550 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS04550 SM00866 A4V04_RS04550 A4V04_RS04555 SM00487 DEAD-like helicases superfamily A4V04_RS04555 SM00490 helicase superfamily c-terminal domain A4V04_RS04615 SM00870 A4V04_RS04615 A4V04_RS04635 SM00342 helix_turn_helix, arabinose operon control protein A4V04_RS04640 SM00849 Metallo-beta-lactamase superfamily A4V04_RS04655 SM00382 ATPases associated with a variety of cellular activities A4V04_RS04720 SM00421 helix_turn_helix, Lux Regulon A4V04_RS04720 SM00448 cheY-homologous receiver domain A4V04_RS04725 SM00387 Histidine kinase-like ATPases A4V04_RS04725 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS04780 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS04835 SM00902 Iron hydrogenase small subunit A4V04_RS04835 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A4V04_RS04840 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A4V04_RS04875 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A4V04_RS04875 SM00475 5'-3' exonuclease A4V04_RS04875 SM00482 DNA polymerase A domain A4V04_RS04880 SM00528 Domain in histone-like proteins of HNS family A4V04_RS04915 SM00981 A4V04_RS04915 A4V04_RS05015 SM00411 bacterial (prokaryotic) histone like domain A4V04_RS05025 SM00382 ATPases associated with a variety of cellular activities A4V04_RS05025 SM00464 Found in ATP-dependent protease La (LON) A4V04_RS05030 SM00382 ATPases associated with a variety of cellular activities A4V04_RS05030 SM01086 C-terminal, D2-small domain, of ClpB protein A4V04_RS05170 SM00899 A4V04_RS05170 A4V04_RS05175 SM00899 A4V04_RS05175 A4V04_RS05220 SM00448 cheY-homologous receiver domain A4V04_RS05235 SM00900 A4V04_RS05235 A4V04_RS05305 SM00861 Transketolase, pyrimidine binding domain A4V04_RS05320 SM00450 Rhodanese Homology Domain A4V04_RS05340 SM00387 Histidine kinase-like ATPases A4V04_RS05340 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS05365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4V04_RS05365 SM00387 Histidine kinase-like ATPases A4V04_RS05365 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS05370 SM00448 cheY-homologous receiver domain A4V04_RS05370 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS05390 SM00986 Uracil DNA glycosylase superfamily A4V04_RS05390 SM00987 UreE urease accessory protein, C-terminal domain A4V04_RS05395 SM00487 DEAD-like helicases superfamily A4V04_RS05395 SM00490 helicase superfamily c-terminal domain A4V04_RS05395 SM00982 A4V04_RS05395 A4V04_RS05395 SM01058 CarD-like/TRCF domain A4V04_RS05450 SM00421 helix_turn_helix, Lux Regulon A4V04_RS05450 SM00448 cheY-homologous receiver domain A4V04_RS05455 SM00387 Histidine kinase-like ATPases A4V04_RS05465 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS05545 SM00411 bacterial (prokaryotic) histone like domain A4V04_RS05565 SM01126 A4V04_RS05565 A4V04_RS05590 SM00091 PAS domain A4V04_RS05590 SM00387 Histidine kinase-like ATPases A4V04_RS05590 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS05595 SM00421 helix_turn_helix, Lux Regulon A4V04_RS05595 SM00448 cheY-homologous receiver domain A4V04_RS05620 SM00382 ATPases associated with a variety of cellular activities A4V04_RS05620 SM00448 cheY-homologous receiver domain A4V04_RS05625 SM00387 Histidine kinase-like ATPases A4V04_RS05625 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS05630 SM01230 A4V04_RS05630 A4V04_RS05635 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS05690 SM00869 Autotransporter beta-domain A4V04_RS05715 SM00387 Histidine kinase-like ATPases A4V04_RS05715 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS05715 SM00448 cheY-homologous receiver domain A4V04_RS05735 SM00869 Autotransporter beta-domain A4V04_RS05745 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS05745 SM01240 A4V04_RS05745 A4V04_RS05820 SM00935 Outer membrane protein (OmpH-like) A4V04_RS05830 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4V04_RS05890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4V04_RS05900 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4V04_RS05900 SM00292 breast cancer carboxy-terminal domain A4V04_RS05900 SM00532 Ligase N family A4V04_RS05935 SM00382 ATPases associated with a variety of cellular activities A4V04_RS05985 SM00899 A4V04_RS05985 A4V04_RS05990 SM00899 A4V04_RS05990 A4V04_RS06070 SM00852 Probable molybdopterin binding domain A4V04_RS06125 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4V04_RS06170 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A4V04_RS06170 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A4V04_RS06170 SM00493 A4V04_RS06170 A4V04_RS06235 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS06265 SM00966 SpoVT / AbrB like domain A4V04_RS06325 SM00966 SpoVT / AbrB like domain A4V04_RS06345 SM00869 Autotransporter beta-domain A4V04_RS06475 SM00470 ParB-like nuclease domain A4V04_RS06570 SM00857 Resolvase, N terminal domain A4V04_RS06600 SM00062 Bacterial periplasmic substrate-binding proteins A4V04_RS06600 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4V04_RS06610 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06625 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06630 SM00977 TilS substrate C-terminal domain A4V04_RS06640 SM00478 endonuclease III A4V04_RS06645 SM00840 A4V04_RS06645 A4V04_RS06650 SM00028 Tetratricopeptide repeats A4V04_RS06675 SM00248 ankyrin repeats A4V04_RS06685 SM00028 Tetratricopeptide repeats A4V04_RS06740 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06760 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS06855 SM01323 A4V04_RS06855 A4V04_RS06875 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06880 SM00481 DNA polymerase alpha chain like domain A4V04_RS06890 SM01103 A4V04_RS06890 A4V04_RS06905 SM00851 MGS-like domain A4V04_RS06905 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A4V04_RS06915 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A4V04_RS06925 SM00072 Guanylate kinase homologues. A4V04_RS06930 SM01409 A4V04_RS06930 A4V04_RS06935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4V04_RS06935 SM00954 Region found in RelA / SpoT proteins A4V04_RS06955 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06960 SM00062 Bacterial periplasmic substrate-binding proteins A4V04_RS06965 SM00493 A4V04_RS06965 A4V04_RS06975 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06995 SM00357 Cold shock protein domain A4V04_RS06995 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06995 SM00959 Rho termination factor, N-terminal domain A4V04_RS07055 SM00028 Tetratricopeptide repeats A4V04_RS07130 SM00448 cheY-homologous receiver domain A4V04_RS07130 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS07135 SM00387 Histidine kinase-like ATPases A4V04_RS07135 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS07160 SM00852 Probable molybdopterin binding domain A4V04_RS07175 SM00487 DEAD-like helicases superfamily A4V04_RS07175 SM00490 helicase superfamily c-terminal domain A4V04_RS07230 SM01321 A4V04_RS07230 A4V04_RS07275 SM00670 Large family of predicted nucleotide-binding domains A4V04_RS07280 SM01321 A4V04_RS07280 A4V04_RS07300 SM00342 helix_turn_helix, arabinose operon control protein A4V04_RS07355 SM00967 RNA 2'-O ribose methyltransferase substrate binding A4V04_RS07360 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS07360 SM00357 Cold shock protein domain A4V04_RS07360 SM00955 A4V04_RS07360 A4V04_RS07395 SM00062 Bacterial periplasmic substrate-binding proteins A4V04_RS07395 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4V04_RS07405 SM00382 ATPases associated with a variety of cellular activities A4V04_RS07490 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS07530 SM00869 Autotransporter beta-domain A4V04_RS07545 SM00853 MutL C terminal dimerisation domain A4V04_RS07545 SM01340 A4V04_RS07545 A4V04_RS07565 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4V04_RS07570 SM00861 Transketolase, pyrimidine binding domain A4V04_RS07590 SM00870 A4V04_RS07590 A4V04_RS07605 SM00448 cheY-homologous receiver domain A4V04_RS07605 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS07610 SM00387 Histidine kinase-like ATPases A4V04_RS07610 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS07620 SM00419 helix_turn_helix, cAMP Regulatory protein A4V04_RS07640 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS07640 SM00924 MgtE intracellular N domain A4V04_RS07650 SM00955 A4V04_RS07650 A4V04_RS07680 SM00878 Biotin carboxylase C-terminal domain A4V04_RS07695 SM00382 ATPases associated with a variety of cellular activities A4V04_RS07765 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4V04_RS07765 SM00387 Histidine kinase-like ATPases A4V04_RS07770 SM00421 helix_turn_helix, Lux Regulon A4V04_RS07770 SM00448 cheY-homologous receiver domain A4V04_RS07790 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS07815 SM01001 AIR carboxylase A4V04_RS07830 SM00421 helix_turn_helix, Lux Regulon A4V04_RS07830 SM00448 cheY-homologous receiver domain A4V04_RS07835 SM00387 Histidine kinase-like ATPases A4V04_RS07835 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS07850 SM00382 ATPases associated with a variety of cellular activities A4V04_RS07855 SM00710 Parallel beta-helix repeats A4V04_RS07855 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses A4V04_RS07880 SM00450 Rhodanese Homology Domain A4V04_RS07905 SM01209 A4V04_RS07905 A4V04_RS07905 SM01210 A4V04_RS07905 A4V04_RS07930 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS08005 SM00487 DEAD-like helicases superfamily A4V04_RS08005 SM00490 helicase superfamily c-terminal domain A4V04_RS08050 SM00062 Bacterial periplasmic substrate-binding proteins A4V04_RS08050 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4V04_RS08065 SM00271 DnaJ molecular chaperone homology domain A4V04_RS08095 SM00448 cheY-homologous receiver domain A4V04_RS08095 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS08100 SM00387 Histidine kinase-like ATPases A4V04_RS08100 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS08150 SM00487 DEAD-like helicases superfamily A4V04_RS08150 SM00490 helicase superfamily c-terminal domain A4V04_RS08210 SM00563 Phosphate acyltransferases A4V04_RS08270 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08275 SM00507 HNH nucleases A4V04_RS08280 SM00347 helix_turn_helix multiple antibiotic resistance protein A4V04_RS08305 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08310 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08370 SM00986 Uracil DNA glycosylase superfamily A4V04_RS08370 SM00987 UreE urease accessory protein, C-terminal domain A4V04_RS08385 SM00925 MltA specific insert domain A4V04_RS08425 SM00937 A4V04_RS08425 A4V04_RS08495 SM00421 helix_turn_helix, Lux Regulon A4V04_RS08495 SM00448 cheY-homologous receiver domain A4V04_RS08540 SM00919 Malic enzyme, NAD binding domain A4V04_RS08540 SM01274 A4V04_RS08540 A4V04_RS08565 SM00798 AICARFT/IMPCHase bienzyme A4V04_RS08565 SM00851 MGS-like domain A4V04_RS08595 SM00650 Ribosomal RNA adenine dimethylases A4V04_RS08605 SM00563 Phosphate acyltransferases A4V04_RS08635 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS08635 SM01091 Transporter associated domain A4V04_RS08645 SM00322 K homology RNA-binding domain A4V04_RS08650 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS08665 SM00900 A4V04_RS08665 A4V04_RS08730 SM00563 Phosphate acyltransferases A4V04_RS08735 SM00732 Likely ribonuclease with RNase H fold. A4V04_RS08800 SM01211 A4V04_RS08800 A4V04_RS08810 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08840 SM00387 Histidine kinase-like ATPases A4V04_RS08840 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS08845 SM00421 helix_turn_helix, Lux Regulon A4V04_RS08845 SM00448 cheY-homologous receiver domain A4V04_RS08855 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08875 SM00838 Elongation factor G C-terminus A4V04_RS08875 SM00889 Elongation factor G, domain IV A4V04_RS08880 SM00834 Putative regulatory protein A4V04_RS08905 SM00881 CoA binding domain A4V04_RS08925 SM00421 helix_turn_helix, Lux Regulon A4V04_RS08925 SM00448 cheY-homologous receiver domain A4V04_RS08930 SM00387 Histidine kinase-like ATPases A4V04_RS08930 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS08945 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08950 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS08970 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09000 SM00478 endonuclease III A4V04_RS09000 SM00525 A4V04_RS09000 A4V04_RS09005 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A4V04_RS09005 SM01232 A4V04_RS09005 A4V04_RS09035 SM00902 Iron hydrogenase small subunit A4V04_RS09045 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS09060 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09080 SM00421 helix_turn_helix, Lux Regulon A4V04_RS09080 SM00448 cheY-homologous receiver domain A4V04_RS09085 SM00387 Histidine kinase-like ATPases A4V04_RS09120 SM00869 Autotransporter beta-domain A4V04_RS09160 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain A4V04_RS09170 SM00852 Probable molybdopterin binding domain A4V04_RS09180 SM00421 helix_turn_helix, Lux Regulon A4V04_RS09180 SM00448 cheY-homologous receiver domain A4V04_RS09190 SM00387 Histidine kinase-like ATPases A4V04_RS09190 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS09200 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS09210 SM00905 Dihydroneopterin aldolase A4V04_RS09270 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A4V04_RS09280 SM00833 Cobalamin synthesis protein cobW C-terminal domain A4V04_RS09300 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS09300 SM00866 A4V04_RS09300 A4V04_RS09330 SM01119 A4V04_RS09330 A4V04_RS09365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4V04_RS09365 SM00245 tail specific protease A4V04_RS09375 SM00855 Phosphoglycerate mutase family A4V04_RS09380 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS09415 SM00450 Rhodanese Homology Domain A4V04_RS09430 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09440 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09505 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09515 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09515 SM00962 SRP54-type protein, GTPase domain A4V04_RS09515 SM00963 SRP54-type protein, helical bundle domain A4V04_RS09605 SM01221 A4V04_RS09605 A4V04_RS09605 SM01222 A4V04_RS09605 A4V04_RS09675 SM00244 prohibitin homologues A4V04_RS09765 SM00845 GatB domain A4V04_RS09780 SM00947 Carbonic anhydrase A4V04_RS09820 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain A4V04_RS09900 SM00448 cheY-homologous receiver domain A4V04_RS09905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4V04_RS09905 SM00387 Histidine kinase-like ATPases A4V04_RS09905 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS09935 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A4V04_RS09935 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A4V04_RS09935 SM00493 A4V04_RS09935 A4V04_RS09945 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS09945 SM01091 Transporter associated domain A4V04_RS09955 SM00271 DnaJ molecular chaperone homology domain A4V04_RS09965 SM01321 A4V04_RS09965 A4V04_RS09970 SM00062 Bacterial periplasmic substrate-binding proteins A4V04_RS10000 SM00506 Appr-1"-p processing enzyme A4V04_RS10010 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10090 SM00387 Histidine kinase-like ATPases A4V04_RS10090 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS10095 SM00421 helix_turn_helix, Lux Regulon A4V04_RS10095 SM00448 cheY-homologous receiver domain A4V04_RS10120 SM00870 A4V04_RS10120 A4V04_RS10150 SM00028 Tetratricopeptide repeats A4V04_RS10170 SM01400 A4V04_RS10170 A4V04_RS10180 SM00487 DEAD-like helicases superfamily A4V04_RS10180 SM00490 helicase superfamily c-terminal domain A4V04_RS10200 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS10210 SM01118 A4V04_RS10210 A4V04_RS10240 SM00421 helix_turn_helix, Lux Regulon A4V04_RS10275 SM00421 helix_turn_helix, Lux Regulon A4V04_RS10275 SM00448 cheY-homologous receiver domain A4V04_RS10280 SM00387 Histidine kinase-like ATPases A4V04_RS10280 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS10295 SM00900 A4V04_RS10295 A4V04_RS10305 SM00421 helix_turn_helix, Lux Regulon A4V04_RS10305 SM00448 cheY-homologous receiver domain A4V04_RS10310 SM00387 Histidine kinase-like ATPases A4V04_RS10310 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS10330 SM00936 Penicillin-binding protein 5, C-terminal domain A4V04_RS10350 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS10365 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10375 SM00749 bacterial OsmY and nodulation domain A4V04_RS10400 SM00387 Histidine kinase-like ATPases A4V04_RS10400 SM00433 TopoisomeraseII A4V04_RS10405 SM00480 DNA polymerase III beta subunit A4V04_RS10410 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10410 SM00760 Bacterial dnaA protein helix-turn-helix domain A4V04_RS10425 SM01234 A4V04_RS10425 A4V04_RS10475 SM01228 A4V04_RS10475 A4V04_RS10525 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10550 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10565 SM00470 ParB-like nuclease domain A4V04_RS10605 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10630 SM00487 DEAD-like helicases superfamily A4V04_RS10630 SM00490 helicase superfamily c-terminal domain A4V04_RS10680 SM00978 A4V04_RS10680 A4V04_RS10715 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS10715 SM00419 helix_turn_helix, cAMP Regulatory protein A4V04_RS10735 SM00857 Resolvase, N terminal domain A4V04_RS10760 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4V04_RS10770 SM00387 Histidine kinase-like ATPases A4V04_RS10770 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS10775 SM00448 cheY-homologous receiver domain A4V04_RS10775 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS10830 SM00900 A4V04_RS10830 A4V04_RS10835 SM00387 Histidine kinase-like ATPases A4V04_RS10835 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS10840 SM00421 helix_turn_helix, Lux Regulon A4V04_RS10840 SM00448 cheY-homologous receiver domain A4V04_RS10865 SM00854 Bacterial capsule synthesis protein PGA_cap A4V04_RS10895 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS10895 SM00866 A4V04_RS10895 A4V04_RS10920 SM00327 von Willebrand factor (vWF) type A domain A4V04_RS10920 SM00609 Vault protein Inter-alpha-Trypsin domain A4V04_RS10925 SM00422 helix_turn_helix, mercury resistance A4V04_RS10930 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10950 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS10985 SM00836 DALR anticodon binding domain A4V04_RS10985 SM01016 Arginyl tRNA synthetase N terminal dom A4V04_RS11040 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A4V04_RS11040 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A4V04_RS11045 SM00649 Ribosomal protein L11/L12 A4V04_RS11070 SM00663 RNA polymerase I subunit A N-terminus A4V04_RS11085 SM00838 Elongation factor G C-terminus A4V04_RS11085 SM00889 Elongation factor G, domain IV A4V04_RS11095 SM01403 A4V04_RS11095 A4V04_RS11120 SM00342 helix_turn_helix, arabinose operon control protein A4V04_RS11155 SM01382 A4V04_RS11155 A4V04_RS11155 SM01383 A4V04_RS11155 A4V04_RS11170 SM00322 K homology RNA-binding domain A4V04_RS11190 SM01374 A4V04_RS11190 A4V04_RS11195 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A4V04_RS11260 SM00363 S4 RNA-binding domain A4V04_RS11260 SM01390 A4V04_RS11260 A4V04_RS11265 SM00662 RNA polymerases D A4V04_RS11275 SM00363 S4 RNA-binding domain A4V04_RS11320 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS11355 SM00900 A4V04_RS11355 A4V04_RS11375 SM00382 ATPases associated with a variety of cellular activities A4V04_RS11395 SM00870 A4V04_RS11395 A4V04_RS11415 SM01240 A4V04_RS11415 A4V04_RS11445 SM01004 Delta-aminolevulinic acid dehydratase A4V04_RS11450 SM00421 helix_turn_helix, Lux Regulon A4V04_RS11450 SM00448 cheY-homologous receiver domain A4V04_RS11455 SM00387 Histidine kinase-like ATPases A4V04_RS11455 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS11475 SM00900 A4V04_RS11475 A4V04_RS11490 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS11500 SM00382 ATPases associated with a variety of cellular activities A4V04_RS11570 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A4V04_RS11660 SM00869 Autotransporter beta-domain A4V04_RS11700 SM00869 Autotransporter beta-domain A4V04_RS11705 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS11740 SM00382 ATPases associated with a variety of cellular activities A4V04_RS11765 SM00382 ATPases associated with a variety of cellular activities A4V04_RS11870 SM00957 SecA DEAD-like domain A4V04_RS11870 SM00958 SecA preprotein cross-linking domain A4V04_RS11880 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS11880 SM00866 A4V04_RS11880 A4V04_RS11885 SM00998 Adenylosuccinate lyase C-terminus A4V04_RS11900 SM00864 Tubulin/FtsZ family, GTPase domain A4V04_RS11900 SM00865 Tubulin/FtsZ family, C-terminal domain A4V04_RS11905 SM00842 Cell division protein FtsA A4V04_RS12020 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A4V04_RS12050 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS12090 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12120 SM00883 Chaperonin 10 Kd subunit A4V04_RS12160 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS12160 SM01091 Transporter associated domain A4V04_RS12225 SM00363 S4 RNA-binding domain A4V04_RS12240 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4V04_RS12315 SM00881 CoA binding domain A4V04_RS12330 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12370 SM00342 helix_turn_helix, arabinose operon control protein A4V04_RS12375 SM00507 HNH nucleases A4V04_RS12380 SM00387 Histidine kinase-like ATPases A4V04_RS12380 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS12385 SM00421 helix_turn_helix, Lux Regulon A4V04_RS12385 SM00448 cheY-homologous receiver domain A4V04_RS12420 SM00974 A4V04_RS12420 A4V04_RS12425 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12425 SM00930 A4V04_RS12425 A4V04_RS12460 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12570 SM00869 Autotransporter beta-domain A4V04_RS12625 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12655 SM01321 A4V04_RS12655 A4V04_RS12680 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4V04_RS12775 SM00422 helix_turn_helix, mercury resistance A4V04_RS12820 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12850 SM00387 Histidine kinase-like ATPases A4V04_RS12850 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS12855 SM00448 cheY-homologous receiver domain A4V04_RS12855 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS12890 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12895 SM00487 DEAD-like helicases superfamily A4V04_RS12895 SM00490 helicase superfamily c-terminal domain A4V04_RS12915 SM00487 DEAD-like helicases superfamily A4V04_RS12940 SM00421 helix_turn_helix, Lux Regulon A4V04_RS12940 SM00448 cheY-homologous receiver domain A4V04_RS12945 SM00387 Histidine kinase-like ATPases A4V04_RS12950 SM00900 A4V04_RS12950 A4V04_RS12990 SM00382 ATPases associated with a variety of cellular activities A4V04_RS13010 SM01321 A4V04_RS13010 A4V04_RS13025 SM00382 ATPases associated with a variety of cellular activities A4V04_RS13030 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4V04_RS13040 SM00382 ATPases associated with a variety of cellular activities A4V04_RS13040 SM00962 SRP54-type protein, GTPase domain A4V04_RS13040 SM00963 SRP54-type protein, helical bundle domain A4V04_RS13055 SM00644 A4V04_RS13055 A4V04_RS13100 SM00487 DEAD-like helicases superfamily A4V04_RS13100 SM00490 helicase superfamily c-terminal domain A4V04_RS13105 SM00226 Low molecular weight phosphatase family