A4V04_RS00005 SM00271 DnaJ molecular chaperone homology domain A4V04_RS00030 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS00070 SM00382 ATPases associated with a variety of cellular activities A4V04_RS00095 SM00954 Region found in RelA / SpoT proteins A4V04_RS00145 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS00160 SM00422 helix_turn_helix, mercury resistance A4V04_RS00165 SM00411 bacterial (prokaryotic) histone like domain A4V04_RS00170 SM00873 B3/4 domain A4V04_RS00170 SM00874 tRNA synthetase B5 domain A4V04_RS00170 SM00896 Ferredoxin-fold anticodon binding domain A4V04_RS00195 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4V04_RS00210 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS00225 SM00257 Lysin motif A4V04_RS00250 SM00562 A4V04_RS00250 A4V04_RS00255 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS00280 SM00564 beta-propeller repeat A4V04_RS00300 SM00244 prohibitin homologues A4V04_RS00305 SM00244 prohibitin homologues A4V04_RS00320 SM00788 Adenylosuccinate synthetase A4V04_RS00335 SM00852 Probable molybdopterin binding domain A4V04_RS00345 SM00382 ATPases associated with a variety of cellular activities A4V04_RS00345 SM01086 C-terminal, D2-small domain, of ClpB protein A4V04_RS00675 SM00460 Transglutaminase/protease-like homologues A4V04_RS00735 SM00100 Cyclic nucleotide-monophosphate binding domain A4V04_RS00735 SM00419 helix_turn_helix, cAMP Regulatory protein A4V04_RS00740 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS00745 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4V04_RS00795 SM00357 Cold shock protein domain A4V04_RS00805 SM00382 ATPases associated with a variety of cellular activities A4V04_RS00805 SM01086 C-terminal, D2-small domain, of ClpB protein A4V04_RS00830 SM00904 Riboflavin kinase A4V04_RS00880 SM00400 zinc finger A4V04_RS00880 SM00493 A4V04_RS00880 A4V04_RS00905 SM01131 A4V04_RS00905 A4V04_RS00925 SM00938 Nitrogen regulatory protein P-II A4V04_RS00930 SM00463 Small MutS-related domain A4V04_RS00940 SM00843 A4V04_RS00940 A4V04_RS00980 SM00646 A4V04_RS00980 A4V04_RS01040 SM00363 S4 RNA-binding domain A4V04_RS01055 SM01001 AIR carboxylase A4V04_RS01095 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A4V04_RS01130 SM00479 A4V04_RS01130 A4V04_RS01175 SM00382 ATPases associated with a variety of cellular activities A4V04_RS01200 SM00257 Lysin motif A4V04_RS01295 SM00382 ATPases associated with a variety of cellular activities A4V04_RS01355 SM00984 UDP binding domain A4V04_RS01470 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS01475 SM00434 DNA Topoisomerase IV A4V04_RS01485 SM00830 Chorismate mutase type II A4V04_RS01510 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS01515 SM00411 bacterial (prokaryotic) histone like domain A4V04_RS01545 SM00487 DEAD-like helicases superfamily A4V04_RS01545 SM00490 helicase superfamily c-terminal domain A4V04_RS01550 SM00479 A4V04_RS01550 A4V04_RS01560 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS01565 SM00900 A4V04_RS01565 A4V04_RS01570 SM00422 helix_turn_helix, mercury resistance A4V04_RS01685 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS01700 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A4V04_RS01875 SM00327 von Willebrand factor (vWF) type A domain A4V04_RS01890 SM00778 Zinc-binding domain of primase-helicase A4V04_RS01950 SM00382 ATPases associated with a variety of cellular activities A4V04_RS01980 SM00387 Histidine kinase-like ATPases A4V04_RS01980 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS01985 SM00421 helix_turn_helix, Lux Regulon A4V04_RS01985 SM00448 cheY-homologous receiver domain A4V04_RS02075 SM00954 Region found in RelA / SpoT proteins A4V04_RS02150 SM00421 helix_turn_helix, Lux Regulon A4V04_RS02150 SM00448 cheY-homologous receiver domain A4V04_RS02155 SM00387 Histidine kinase-like ATPases A4V04_RS02155 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS02160 SM00900 A4V04_RS02160 A4V04_RS02195 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS02225 SM01126 A4V04_RS02225 A4V04_RS02280 SM00998 Adenylosuccinate lyase C-terminus A4V04_RS02310 SM00506 Appr-1"-p processing enzyme A4V04_RS02345 SM00869 Autotransporter beta-domain A4V04_RS02360 SM00421 helix_turn_helix, Lux Regulon A4V04_RS02360 SM00448 cheY-homologous receiver domain A4V04_RS02365 SM00387 Histidine kinase-like ATPases A4V04_RS02365 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS02375 SM00387 Histidine kinase-like ATPases A4V04_RS02380 SM00421 helix_turn_helix, Lux Regulon A4V04_RS02380 SM00448 cheY-homologous receiver domain A4V04_RS02425 SM00895 A4V04_RS02425 A4V04_RS02635 SM00869 Autotransporter beta-domain A4V04_RS02665 SM00387 Histidine kinase-like ATPases A4V04_RS02665 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS02665 SM00448 cheY-homologous receiver domain A4V04_RS02690 SM00382 ATPases associated with a variety of cellular activities A4V04_RS02690 SM00487 DEAD-like helicases superfamily A4V04_RS02690 SM00490 helicase superfamily c-terminal domain A4V04_RS02690 SM00847 Helicase associated domain (HA2) Add an annotation A4V04_RS02700 SM00479 A4V04_RS02700 A4V04_RS02705 SM00363 S4 RNA-binding domain A4V04_RS02715 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS02715 SM00322 K homology RNA-binding domain A4V04_RS02735 SM00838 Elongation factor G C-terminus A4V04_RS02785 SM00869 Autotransporter beta-domain A4V04_RS02800 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS02805 SM00363 S4 RNA-binding domain A4V04_RS02835 SM00869 Autotransporter beta-domain A4V04_RS02840 SM00869 Autotransporter beta-domain A4V04_RS02880 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A4V04_RS02885 SM00822 A4V04_RS02885 A4V04_RS02890 SM00823 Phosphopantetheine attachment site A4V04_RS02895 SM00825 Beta-ketoacyl synthase A4V04_RS02900 SM00838 Elongation factor G C-terminus A4V04_RS02910 SM00358 Double-stranded RNA binding motif A4V04_RS02910 SM00535 Ribonuclease III family A4V04_RS02940 SM00670 Large family of predicted nucleotide-binding domains A4V04_RS02980 SM00861 Transketolase, pyrimidine binding domain A4V04_RS03000 SM00487 DEAD-like helicases superfamily A4V04_RS03000 SM00491 A4V04_RS03000 A4V04_RS03015 SM00363 S4 RNA-binding domain A4V04_RS03030 SM00450 Rhodanese Homology Domain A4V04_RS03035 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS03075 SM00387 Histidine kinase-like ATPases A4V04_RS03075 SM00433 TopoisomeraseII A4V04_RS03080 SM00434 DNA Topoisomerase IV A4V04_RS03135 SM00387 Histidine kinase-like ATPases A4V04_RS03145 SM00478 endonuclease III A4V04_RS03145 SM00525 A4V04_RS03145 A4V04_RS03200 SM01192 A4V04_RS03200 A4V04_RS03200 SM01193 A4V04_RS03200 A4V04_RS03210 SM01005 Alanine racemase, C-terminal domain A4V04_RS03225 SM00481 DNA polymerase alpha chain like domain A4V04_RS03245 SM01130 A4V04_RS03245 A4V04_RS03285 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A4V04_RS03285 SM00534 ATPase domain of DNA mismatch repair MUTS family A4V04_RS03330 SM00318 Staphylococcal nuclease homologues A4V04_RS03345 SM00841 Elongation factor P, C-terminal A4V04_RS03345 SM01185 A4V04_RS03345 A4V04_RS03355 SM00465 GIY-YIG type nucleases (URI domain) A4V04_RS03400 SM00382 ATPases associated with a variety of cellular activities A4V04_RS03425 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS03425 SM01091 Transporter associated domain A4V04_RS03440 SM00870 A4V04_RS03440 A4V04_RS03480 SM01329 A4V04_RS03480 A4V04_RS03485 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4V04_RS03545 SM00900 A4V04_RS03545 A4V04_RS03600 SM00893 Electron transfer flavoprotein domain A4V04_RS03605 SM00893 Electron transfer flavoprotein domain A4V04_RS03655 SM00479 A4V04_RS03655 A4V04_RS03690 SM00387 Histidine kinase-like ATPases A4V04_RS03690 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS03695 SM00421 helix_turn_helix, Lux Regulon A4V04_RS03695 SM00448 cheY-homologous receiver domain A4V04_RS03725 SM00881 CoA binding domain A4V04_RS03730 SM00411 bacterial (prokaryotic) histone like domain A4V04_RS03780 SM00382 ATPases associated with a variety of cellular activities A4V04_RS03810 SM00342 helix_turn_helix, arabinose operon control protein A4V04_RS03825 SM00478 endonuclease III A4V04_RS03850 SM00917 LeuA allosteric (dimerisation) domain A4V04_RS03875 SM01387 A4V04_RS03875 A4V04_RS03880 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS03880 SM00322 K homology RNA-binding domain A4V04_RS03885 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS03980 SM00900 A4V04_RS03980 A4V04_RS04020 SM00346 helix_turn_helix isocitrate lyase regulation A4V04_RS04065 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4V04_RS04065 SM00382 ATPases associated with a variety of cellular activities A4V04_RS04155 SM00671 Sel1-like repeats. A4V04_RS04220 SM00938 Nitrogen regulatory protein P-II A4V04_RS04280 SM00422 helix_turn_helix, mercury resistance A4V04_RS04295 SM00671 Sel1-like repeats. A4V04_RS04335 SM00382 ATPases associated with a variety of cellular activities A4V04_RS04345 SM00870 A4V04_RS04345 A4V04_RS04440 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS04470 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS04510 SM00422 helix_turn_helix, mercury resistance A4V04_RS04520 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A4V04_RS04570 SM00671 Sel1-like repeats. A4V04_RS04575 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS04575 SM00866 A4V04_RS04575 A4V04_RS04640 SM00870 A4V04_RS04640 A4V04_RS04660 SM00342 helix_turn_helix, arabinose operon control protein A4V04_RS04665 SM00849 Metallo-beta-lactamase superfamily A4V04_RS04680 SM00382 ATPases associated with a variety of cellular activities A4V04_RS04745 SM00421 helix_turn_helix, Lux Regulon A4V04_RS04745 SM00448 cheY-homologous receiver domain A4V04_RS04750 SM00387 Histidine kinase-like ATPases A4V04_RS04750 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS04810 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS04865 SM00902 Iron hydrogenase small subunit A4V04_RS04865 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A4V04_RS04870 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region A4V04_RS04905 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A4V04_RS04905 SM00475 5'-3' exonuclease A4V04_RS04905 SM00482 DNA polymerase A domain A4V04_RS04910 SM00528 Domain in histone-like proteins of HNS family A4V04_RS04945 SM00981 A4V04_RS04945 A4V04_RS05045 SM00411 bacterial (prokaryotic) histone like domain A4V04_RS05055 SM00382 ATPases associated with a variety of cellular activities A4V04_RS05055 SM00464 Found in ATP-dependent protease La (LON) A4V04_RS05060 SM00382 ATPases associated with a variety of cellular activities A4V04_RS05060 SM01086 C-terminal, D2-small domain, of ClpB protein A4V04_RS05200 SM00899 A4V04_RS05200 A4V04_RS05205 SM00899 A4V04_RS05205 A4V04_RS05255 SM00448 cheY-homologous receiver domain A4V04_RS05270 SM00900 A4V04_RS05270 A4V04_RS05340 SM00861 Transketolase, pyrimidine binding domain A4V04_RS05355 SM00450 Rhodanese Homology Domain A4V04_RS05375 SM00387 Histidine kinase-like ATPases A4V04_RS05375 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS05400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4V04_RS05400 SM00387 Histidine kinase-like ATPases A4V04_RS05400 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS05405 SM00448 cheY-homologous receiver domain A4V04_RS05405 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS05425 SM00986 Uracil DNA glycosylase superfamily A4V04_RS05425 SM00987 UreE urease accessory protein, C-terminal domain A4V04_RS05430 SM00487 DEAD-like helicases superfamily A4V04_RS05430 SM00490 helicase superfamily c-terminal domain A4V04_RS05430 SM00982 A4V04_RS05430 A4V04_RS05430 SM01058 CarD-like/TRCF domain A4V04_RS05485 SM00421 helix_turn_helix, Lux Regulon A4V04_RS05485 SM00448 cheY-homologous receiver domain A4V04_RS05490 SM00387 Histidine kinase-like ATPases A4V04_RS05500 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS05580 SM00411 bacterial (prokaryotic) histone like domain A4V04_RS05600 SM01126 A4V04_RS05600 A4V04_RS05625 SM00091 PAS domain A4V04_RS05625 SM00387 Histidine kinase-like ATPases A4V04_RS05625 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS05630 SM00421 helix_turn_helix, Lux Regulon A4V04_RS05630 SM00448 cheY-homologous receiver domain A4V04_RS05655 SM00382 ATPases associated with a variety of cellular activities A4V04_RS05655 SM00448 cheY-homologous receiver domain A4V04_RS05660 SM00387 Histidine kinase-like ATPases A4V04_RS05660 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS05665 SM01230 A4V04_RS05665 A4V04_RS05670 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS05725 SM00869 Autotransporter beta-domain A4V04_RS05755 SM00387 Histidine kinase-like ATPases A4V04_RS05755 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS05755 SM00448 cheY-homologous receiver domain A4V04_RS05775 SM00869 Autotransporter beta-domain A4V04_RS05785 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS05785 SM01240 A4V04_RS05785 A4V04_RS05860 SM00935 Outer membrane protein (OmpH-like) A4V04_RS05870 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4V04_RS05930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4V04_RS05940 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4V04_RS05940 SM00292 breast cancer carboxy-terminal domain A4V04_RS05940 SM00532 Ligase N family A4V04_RS05975 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06025 SM00899 A4V04_RS06025 A4V04_RS06030 SM00899 A4V04_RS06030 A4V04_RS06110 SM00852 Probable molybdopterin binding domain A4V04_RS06165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4V04_RS06210 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A4V04_RS06210 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A4V04_RS06210 SM00493 A4V04_RS06210 A4V04_RS06275 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS06300 SM00966 SpoVT / AbrB like domain A4V04_RS06360 SM00966 SpoVT / AbrB like domain A4V04_RS06380 SM00869 Autotransporter beta-domain A4V04_RS06515 SM00470 ParB-like nuclease domain A4V04_RS06610 SM00857 Resolvase, N terminal domain A4V04_RS06640 SM00062 Bacterial periplasmic substrate-binding proteins A4V04_RS06640 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4V04_RS06650 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06665 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06670 SM00977 TilS substrate C-terminal domain A4V04_RS06680 SM00478 endonuclease III A4V04_RS06685 SM00840 A4V04_RS06685 A4V04_RS06690 SM00028 Tetratricopeptide repeats A4V04_RS06715 SM00248 ankyrin repeats A4V04_RS06725 SM00028 Tetratricopeptide repeats A4V04_RS06780 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06800 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS06870 SM00421 helix_turn_helix, Lux Regulon A4V04_RS06895 SM01323 A4V04_RS06895 A4V04_RS06915 SM00382 ATPases associated with a variety of cellular activities A4V04_RS06920 SM00481 DNA polymerase alpha chain like domain A4V04_RS06930 SM01103 A4V04_RS06930 A4V04_RS06945 SM00851 MGS-like domain A4V04_RS06945 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A4V04_RS06955 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A4V04_RS06965 SM00072 Guanylate kinase homologues. A4V04_RS06970 SM01409 A4V04_RS06970 A4V04_RS06975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4V04_RS06975 SM00954 Region found in RelA / SpoT proteins A4V04_RS07000 SM00382 ATPases associated with a variety of cellular activities A4V04_RS07005 SM00062 Bacterial periplasmic substrate-binding proteins A4V04_RS07010 SM00493 A4V04_RS07010 A4V04_RS07020 SM00382 ATPases associated with a variety of cellular activities A4V04_RS07040 SM00357 Cold shock protein domain A4V04_RS07040 SM00382 ATPases associated with a variety of cellular activities A4V04_RS07040 SM00959 Rho termination factor, N-terminal domain A4V04_RS07100 SM00028 Tetratricopeptide repeats A4V04_RS07175 SM00448 cheY-homologous receiver domain A4V04_RS07175 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS07180 SM00387 Histidine kinase-like ATPases A4V04_RS07180 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS07205 SM00852 Probable molybdopterin binding domain A4V04_RS07220 SM00487 DEAD-like helicases superfamily A4V04_RS07220 SM00490 helicase superfamily c-terminal domain A4V04_RS07280 SM01321 A4V04_RS07280 A4V04_RS07325 SM00670 Large family of predicted nucleotide-binding domains A4V04_RS07330 SM01321 A4V04_RS07330 A4V04_RS07350 SM00342 helix_turn_helix, arabinose operon control protein A4V04_RS07405 SM00967 RNA 2'-O ribose methyltransferase substrate binding A4V04_RS07410 SM00316 Ribosomal protein S1-like RNA-binding domain A4V04_RS07410 SM00357 Cold shock protein domain A4V04_RS07410 SM00955 A4V04_RS07410 A4V04_RS07445 SM00062 Bacterial periplasmic substrate-binding proteins A4V04_RS07445 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4V04_RS07455 SM00382 ATPases associated with a variety of cellular activities A4V04_RS07540 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS07580 SM00869 Autotransporter beta-domain A4V04_RS07595 SM00853 MutL C terminal dimerisation domain A4V04_RS07595 SM01340 A4V04_RS07595 A4V04_RS07615 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A4V04_RS07620 SM00861 Transketolase, pyrimidine binding domain A4V04_RS07640 SM00870 A4V04_RS07640 A4V04_RS07655 SM00448 cheY-homologous receiver domain A4V04_RS07655 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS07660 SM00387 Histidine kinase-like ATPases A4V04_RS07660 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS07670 SM00419 helix_turn_helix, cAMP Regulatory protein A4V04_RS07690 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS07690 SM00924 MgtE intracellular N domain A4V04_RS07700 SM00955 A4V04_RS07700 A4V04_RS07730 SM00878 Biotin carboxylase C-terminal domain A4V04_RS07745 SM00382 ATPases associated with a variety of cellular activities A4V04_RS07815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4V04_RS07815 SM00387 Histidine kinase-like ATPases A4V04_RS07820 SM00421 helix_turn_helix, Lux Regulon A4V04_RS07820 SM00448 cheY-homologous receiver domain A4V04_RS07840 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS07860 SM01001 AIR carboxylase A4V04_RS07875 SM00421 helix_turn_helix, Lux Regulon A4V04_RS07875 SM00448 cheY-homologous receiver domain A4V04_RS07880 SM00387 Histidine kinase-like ATPases A4V04_RS07880 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS07895 SM00382 ATPases associated with a variety of cellular activities A4V04_RS07900 SM00710 Parallel beta-helix repeats A4V04_RS07900 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses A4V04_RS07925 SM00450 Rhodanese Homology Domain A4V04_RS07950 SM01209 A4V04_RS07950 A4V04_RS07950 SM01210 A4V04_RS07950 A4V04_RS07975 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS08050 SM00487 DEAD-like helicases superfamily A4V04_RS08050 SM00490 helicase superfamily c-terminal domain A4V04_RS08095 SM00062 Bacterial periplasmic substrate-binding proteins A4V04_RS08095 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A4V04_RS08110 SM00271 DnaJ molecular chaperone homology domain A4V04_RS08140 SM00448 cheY-homologous receiver domain A4V04_RS08140 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS08145 SM00387 Histidine kinase-like ATPases A4V04_RS08145 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS08195 SM00487 DEAD-like helicases superfamily A4V04_RS08195 SM00490 helicase superfamily c-terminal domain A4V04_RS08255 SM00563 Phosphate acyltransferases A4V04_RS08315 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08320 SM00507 HNH nucleases A4V04_RS08325 SM00347 helix_turn_helix multiple antibiotic resistance protein A4V04_RS08350 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08355 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08415 SM00986 Uracil DNA glycosylase superfamily A4V04_RS08415 SM00987 UreE urease accessory protein, C-terminal domain A4V04_RS08430 SM00925 MltA specific insert domain A4V04_RS08470 SM00937 A4V04_RS08470 A4V04_RS08540 SM00421 helix_turn_helix, Lux Regulon A4V04_RS08540 SM00448 cheY-homologous receiver domain A4V04_RS08585 SM00919 Malic enzyme, NAD binding domain A4V04_RS08585 SM01274 A4V04_RS08585 A4V04_RS08610 SM00798 AICARFT/IMPCHase bienzyme A4V04_RS08610 SM00851 MGS-like domain A4V04_RS08640 SM00650 Ribosomal RNA adenine dimethylases A4V04_RS08650 SM00563 Phosphate acyltransferases A4V04_RS08680 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS08680 SM01091 Transporter associated domain A4V04_RS08690 SM00322 K homology RNA-binding domain A4V04_RS08695 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS08710 SM00900 A4V04_RS08710 A4V04_RS08775 SM00563 Phosphate acyltransferases A4V04_RS08780 SM00732 Likely ribonuclease with RNase H fold. A4V04_RS08845 SM01211 A4V04_RS08845 A4V04_RS08855 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08885 SM00387 Histidine kinase-like ATPases A4V04_RS08885 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS08890 SM00421 helix_turn_helix, Lux Regulon A4V04_RS08890 SM00448 cheY-homologous receiver domain A4V04_RS08900 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08920 SM00838 Elongation factor G C-terminus A4V04_RS08920 SM00889 Elongation factor G, domain IV A4V04_RS08925 SM00834 Putative regulatory protein A4V04_RS08950 SM00881 CoA binding domain A4V04_RS08970 SM00421 helix_turn_helix, Lux Regulon A4V04_RS08970 SM00448 cheY-homologous receiver domain A4V04_RS08975 SM00387 Histidine kinase-like ATPases A4V04_RS08975 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS08990 SM00382 ATPases associated with a variety of cellular activities A4V04_RS08995 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS09015 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09045 SM00478 endonuclease III A4V04_RS09045 SM00525 A4V04_RS09045 A4V04_RS09050 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A4V04_RS09050 SM01232 A4V04_RS09050 A4V04_RS09080 SM00902 Iron hydrogenase small subunit A4V04_RS09090 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS09105 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09125 SM00421 helix_turn_helix, Lux Regulon A4V04_RS09125 SM00448 cheY-homologous receiver domain A4V04_RS09130 SM00387 Histidine kinase-like ATPases A4V04_RS09165 SM00869 Autotransporter beta-domain A4V04_RS09205 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain A4V04_RS09215 SM00852 Probable molybdopterin binding domain A4V04_RS09225 SM00421 helix_turn_helix, Lux Regulon A4V04_RS09225 SM00448 cheY-homologous receiver domain A4V04_RS09235 SM00387 Histidine kinase-like ATPases A4V04_RS09235 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS09245 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS09255 SM00905 Dihydroneopterin aldolase A4V04_RS09315 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A4V04_RS09325 SM00833 Cobalamin synthesis protein cobW C-terminal domain A4V04_RS09345 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS09345 SM00866 A4V04_RS09345 A4V04_RS09375 SM01119 A4V04_RS09375 A4V04_RS09410 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4V04_RS09410 SM00245 tail specific protease A4V04_RS09420 SM00855 Phosphoglycerate mutase family A4V04_RS09425 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS09460 SM00450 Rhodanese Homology Domain A4V04_RS09475 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09485 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09550 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09560 SM00382 ATPases associated with a variety of cellular activities A4V04_RS09560 SM00962 SRP54-type protein, GTPase domain A4V04_RS09560 SM00963 SRP54-type protein, helical bundle domain A4V04_RS09660 SM01221 A4V04_RS09660 A4V04_RS09660 SM01222 A4V04_RS09660 A4V04_RS09730 SM00244 prohibitin homologues A4V04_RS09820 SM00845 GatB domain A4V04_RS09825 SM00869 Autotransporter beta-domain A4V04_RS09835 SM00947 Carbonic anhydrase A4V04_RS09845 SM00869 Autotransporter beta-domain A4V04_RS09875 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain A4V04_RS09960 SM00448 cheY-homologous receiver domain A4V04_RS09965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A4V04_RS09965 SM00387 Histidine kinase-like ATPases A4V04_RS09965 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS09995 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A4V04_RS09995 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A4V04_RS09995 SM00493 A4V04_RS09995 A4V04_RS10005 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS10005 SM01091 Transporter associated domain A4V04_RS10015 SM00271 DnaJ molecular chaperone homology domain A4V04_RS10030 SM00062 Bacterial periplasmic substrate-binding proteins A4V04_RS10060 SM00506 Appr-1"-p processing enzyme A4V04_RS10070 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10150 SM00387 Histidine kinase-like ATPases A4V04_RS10150 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS10155 SM00421 helix_turn_helix, Lux Regulon A4V04_RS10155 SM00448 cheY-homologous receiver domain A4V04_RS10180 SM00870 A4V04_RS10180 A4V04_RS10210 SM00028 Tetratricopeptide repeats A4V04_RS10235 SM01400 A4V04_RS10235 A4V04_RS10245 SM00487 DEAD-like helicases superfamily A4V04_RS10245 SM00490 helicase superfamily c-terminal domain A4V04_RS10265 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS10275 SM01118 A4V04_RS10275 A4V04_RS10310 SM00421 helix_turn_helix, Lux Regulon A4V04_RS10345 SM00421 helix_turn_helix, Lux Regulon A4V04_RS10345 SM00448 cheY-homologous receiver domain A4V04_RS10350 SM00387 Histidine kinase-like ATPases A4V04_RS10350 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS10365 SM00900 A4V04_RS10365 A4V04_RS10375 SM00421 helix_turn_helix, Lux Regulon A4V04_RS10375 SM00448 cheY-homologous receiver domain A4V04_RS10380 SM00387 Histidine kinase-like ATPases A4V04_RS10380 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS10400 SM00936 Penicillin-binding protein 5, C-terminal domain A4V04_RS10420 SM00729 Elongator protein 3, MiaB family, Radical SAM A4V04_RS10435 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10445 SM00749 bacterial OsmY and nodulation domain A4V04_RS10470 SM00387 Histidine kinase-like ATPases A4V04_RS10470 SM00433 TopoisomeraseII A4V04_RS10475 SM00480 DNA polymerase III beta subunit A4V04_RS10480 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10480 SM00760 Bacterial dnaA protein helix-turn-helix domain A4V04_RS10495 SM01234 A4V04_RS10495 A4V04_RS10545 SM01228 A4V04_RS10545 A4V04_RS10560 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10600 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10625 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10640 SM00470 ParB-like nuclease domain A4V04_RS10680 SM00382 ATPases associated with a variety of cellular activities A4V04_RS10705 SM00487 DEAD-like helicases superfamily A4V04_RS10705 SM00490 helicase superfamily c-terminal domain A4V04_RS10755 SM00978 A4V04_RS10755 A4V04_RS10795 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS10795 SM00419 helix_turn_helix, cAMP Regulatory protein A4V04_RS10815 SM00857 Resolvase, N terminal domain A4V04_RS10840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A4V04_RS10855 SM00387 Histidine kinase-like ATPases A4V04_RS10855 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS10860 SM00448 cheY-homologous receiver domain A4V04_RS10860 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS10915 SM00900 A4V04_RS10915 A4V04_RS10920 SM00387 Histidine kinase-like ATPases A4V04_RS10920 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS10925 SM00421 helix_turn_helix, Lux Regulon A4V04_RS10925 SM00448 cheY-homologous receiver domain A4V04_RS10950 SM00854 Bacterial capsule synthesis protein PGA_cap A4V04_RS10980 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS10980 SM00866 A4V04_RS10980 A4V04_RS11005 SM00327 von Willebrand factor (vWF) type A domain A4V04_RS11005 SM00609 Vault protein Inter-alpha-Trypsin domain A4V04_RS11010 SM00422 helix_turn_helix, mercury resistance A4V04_RS11015 SM00382 ATPases associated with a variety of cellular activities A4V04_RS11035 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS11070 SM00836 DALR anticodon binding domain A4V04_RS11070 SM01016 Arginyl tRNA synthetase N terminal dom A4V04_RS11125 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A4V04_RS11125 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A4V04_RS11130 SM00649 Ribosomal protein L11/L12 A4V04_RS11155 SM00663 RNA polymerase I subunit A N-terminus A4V04_RS11170 SM00838 Elongation factor G C-terminus A4V04_RS11170 SM00889 Elongation factor G, domain IV A4V04_RS11180 SM01403 A4V04_RS11180 A4V04_RS11205 SM00342 helix_turn_helix, arabinose operon control protein A4V04_RS11240 SM01382 A4V04_RS11240 A4V04_RS11240 SM01383 A4V04_RS11240 A4V04_RS11255 SM00322 K homology RNA-binding domain A4V04_RS11275 SM01374 A4V04_RS11275 A4V04_RS11280 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A4V04_RS11345 SM00363 S4 RNA-binding domain A4V04_RS11345 SM01390 A4V04_RS11345 A4V04_RS11350 SM00662 RNA polymerases D A4V04_RS11360 SM00363 S4 RNA-binding domain A4V04_RS11405 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS11440 SM00900 A4V04_RS11440 A4V04_RS11460 SM00382 ATPases associated with a variety of cellular activities A4V04_RS11480 SM00870 A4V04_RS11480 A4V04_RS11500 SM01240 A4V04_RS11500 A4V04_RS11530 SM01004 Delta-aminolevulinic acid dehydratase A4V04_RS11535 SM00421 helix_turn_helix, Lux Regulon A4V04_RS11535 SM00448 cheY-homologous receiver domain A4V04_RS11540 SM00387 Histidine kinase-like ATPases A4V04_RS11540 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS11560 SM00900 A4V04_RS11560 A4V04_RS11575 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS11585 SM00382 ATPases associated with a variety of cellular activities A4V04_RS11660 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A4V04_RS11750 SM00869 Autotransporter beta-domain A4V04_RS11790 SM00869 Autotransporter beta-domain A4V04_RS11795 SM00530 Helix-turn-helix XRE-family like proteins A4V04_RS11835 SM00382 ATPases associated with a variety of cellular activities A4V04_RS11860 SM00382 ATPases associated with a variety of cellular activities A4V04_RS11965 SM00957 SecA DEAD-like domain A4V04_RS11965 SM00958 SecA preprotein cross-linking domain A4V04_RS11975 SM00345 helix_turn_helix gluconate operon transcriptional repressor A4V04_RS11975 SM00866 A4V04_RS11975 A4V04_RS11980 SM00998 Adenylosuccinate lyase C-terminus A4V04_RS11995 SM00842 Cell division protein FtsA A4V04_RS12110 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A4V04_RS12140 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A4V04_RS12180 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12210 SM00883 Chaperonin 10 Kd subunit A4V04_RS12250 SM00116 Domain in cystathionine beta-synthase and other proteins. A4V04_RS12250 SM01091 Transporter associated domain A4V04_RS12315 SM00363 S4 RNA-binding domain A4V04_RS12330 SM00859 Semialdehyde dehydrogenase, NAD binding domain A4V04_RS12405 SM00881 CoA binding domain A4V04_RS12420 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12460 SM00342 helix_turn_helix, arabinose operon control protein A4V04_RS12465 SM00507 HNH nucleases A4V04_RS12470 SM00387 Histidine kinase-like ATPases A4V04_RS12470 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS12475 SM00421 helix_turn_helix, Lux Regulon A4V04_RS12475 SM00448 cheY-homologous receiver domain A4V04_RS12510 SM00974 A4V04_RS12510 A4V04_RS12515 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12515 SM00930 A4V04_RS12515 A4V04_RS12550 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12660 SM00869 Autotransporter beta-domain A4V04_RS12715 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12750 SM01321 A4V04_RS12750 A4V04_RS12775 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A4V04_RS12870 SM00422 helix_turn_helix, mercury resistance A4V04_RS12920 SM00382 ATPases associated with a variety of cellular activities A4V04_RS12950 SM00387 Histidine kinase-like ATPases A4V04_RS12950 SM00388 His Kinase A (phosphoacceptor) domain A4V04_RS12955 SM00448 cheY-homologous receiver domain A4V04_RS12955 SM00862 Transcriptional regulatory protein, C terminal A4V04_RS12995 SM00382 ATPases associated with a variety of cellular activities A4V04_RS13000 SM00487 DEAD-like helicases superfamily A4V04_RS13000 SM00490 helicase superfamily c-terminal domain A4V04_RS13020 SM00487 DEAD-like helicases superfamily A4V04_RS13045 SM00421 helix_turn_helix, Lux Regulon A4V04_RS13045 SM00448 cheY-homologous receiver domain A4V04_RS13050 SM00387 Histidine kinase-like ATPases A4V04_RS13055 SM00900 A4V04_RS13055 A4V04_RS13095 SM00382 ATPases associated with a variety of cellular activities A4V04_RS13115 SM01321 A4V04_RS13115 A4V04_RS13130 SM00382 ATPases associated with a variety of cellular activities A4V04_RS13135 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A4V04_RS13145 SM00382 ATPases associated with a variety of cellular activities A4V04_RS13145 SM00962 SRP54-type protein, GTPase domain A4V04_RS13145 SM00963 SRP54-type protein, helical bundle domain A4V04_RS13160 SM00644 A4V04_RS13160 A4V04_RS13205 SM00487 DEAD-like helicases superfamily A4V04_RS13205 SM00490 helicase superfamily c-terminal domain A4V04_RS13210 SM00226 Low molecular weight phosphatase family