locus-tag class description BADSM9389_RS00005 PF11638 DnaA N-terminal domain BADSM9389_RS00005 PF00308 Bacterial dnaA protein BADSM9389_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix BADSM9389_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain BADSM9389_RS00010 PF02767 DNA polymerase III beta subunit, central domain BADSM9389_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain BADSM9389_RS00015 PF02463 RecF/RecN/SMC N terminal domain BADSM9389_RS00020 PF01751 Toprim domain BADSM9389_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus BADSM9389_RS00020 PF00204 DNA gyrase B BADSM9389_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS00020 PF18053 DNA gyrase B subunit insert domain BADSM9389_RS00025 PF06078 Bacterial protein of unknown function (DUF937) BADSM9389_RS00035 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS00035 PF07729 FCD domain BADSM9389_RS00040 PF05035 2-keto-3-deoxy-galactonokinase BADSM9389_RS00045 PF01081 KDPG and KHG aldolase BADSM9389_RS00050 PF13378 Enolase C-terminal domain-like BADSM9389_RS00050 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BADSM9389_RS00055 PF07690 Major Facilitator Superfamily BADSM9389_RS00060 PF01494 FAD binding domain BADSM9389_RS00065 PF12566 Protein of unknown function (DUF3748) BADSM9389_RS00065 PF07676 WD40-like Beta Propeller Repeat BADSM9389_RS00070 PF07119 Protein of unknown function (DUF1375) BADSM9389_RS00075 PF00011 Hsp20/alpha crystallin family BADSM9389_RS00080 PF00011 Hsp20/alpha crystallin family BADSM9389_RS00085 PF02080 TrkA-C domain BADSM9389_RS00085 PF06826 Predicted Permease Membrane Region BADSM9389_RS00090 PF07702 UTRA domain BADSM9389_RS00090 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS00095 PF02378 Phosphotransferase system, EIIC BADSM9389_RS00095 PF00367 phosphotransferase system, EIIB BADSM9389_RS00100 PF11975 Family 4 glycosyl hydrolase C-terminal domain BADSM9389_RS00100 PF02056 Family 4 glycosyl hydrolase BADSM9389_RS00105 PF00291 Pyridoxal-phosphate dependent enzyme BADSM9389_RS00110 PF02447 GntP family permease BADSM9389_RS00115 PF03466 LysR substrate binding domain BADSM9389_RS00115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS00120 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS00125 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS00130 PF00005 ABC transporter BADSM9389_RS00135 PF07690 Major Facilitator Superfamily BADSM9389_RS00155 PF13488 Glycine zipper BADSM9389_RS00155 PF00691 OmpA family BADSM9389_RS00160 PF01568 Molydopterin dinucleotide binding domain BADSM9389_RS00160 PF18364 Molybdopterin oxidoreductase N-terminal domain BADSM9389_RS00160 PF00384 Molybdopterin oxidoreductase BADSM9389_RS00170 PF03352 Methyladenine glycosylase BADSM9389_RS00175 PF03797 Autotransporter beta-domain BADSM9389_RS00180 PF07690 Major Facilitator Superfamily BADSM9389_RS00190 PF08019 Phosphoethanolamine transferase EptA/EptB BADSM9389_RS00190 PF00884 Sulfatase BADSM9389_RS00200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS00205 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS00210 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS00210 PF12911 N-terminal TM domain of oligopeptide transport permease C BADSM9389_RS00215 PF00005 ABC transporter BADSM9389_RS00215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS00220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS00220 PF00005 ABC transporter BADSM9389_RS00235 PF06564 Cellulose biosynthesis protein BcsQ BADSM9389_RS00240 PF00535 Glycosyl transferase family 2 BADSM9389_RS00240 PF03170 Bacterial cellulose synthase subunit BADSM9389_RS00240 PF03552 Cellulose synthase BADSM9389_RS00240 PF07238 PilZ domain BADSM9389_RS00245 PF03170 Bacterial cellulose synthase subunit BADSM9389_RS00250 PF13181 Tetratricopeptide repeat BADSM9389_RS00250 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BADSM9389_RS00260 PF01270 Glycosyl hydrolases family 8 BADSM9389_RS00265 PF04480 Protein of unknown function (DUF559) BADSM9389_RS00270 PF17154 Gammaproteobacterial periplasmic sensor domain BADSM9389_RS00270 PF00563 EAL domain BADSM9389_RS00270 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS00270 PF00672 HAMP domain BADSM9389_RS00275 PF00375 Sodium:dicarboxylate symporter family BADSM9389_RS00280 PF05193 Peptidase M16 inactive domain BADSM9389_RS00280 PF00675 Insulinase (Peptidase family M16) BADSM9389_RS00285 PF00294 pfkB family carbohydrate kinase BADSM9389_RS00290 PF00563 EAL domain BADSM9389_RS00295 PF05170 AsmA family BADSM9389_RS00300 PF07690 Major Facilitator Superfamily BADSM9389_RS00300 PF00083 Sugar (and other) transporter BADSM9389_RS00305 PF03631 Virulence factor BrkB BADSM9389_RS00310 PF03466 LysR substrate binding domain BADSM9389_RS00310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS00320 PF13302 Acetyltransferase (GNAT) domain BADSM9389_RS00335 PF00155 Aminotransferase class I and II BADSM9389_RS00335 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS00345 PF02264 LamB porin BADSM9389_RS00350 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BADSM9389_RS00355 PF02378 Phosphotransferase system, EIIC BADSM9389_RS00360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS00365 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS00375 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS00375 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BADSM9389_RS00380 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BADSM9389_RS00385 PF01432 Peptidase family M3 BADSM9389_RS00390 PF04445 Putative SAM-dependent methyltransferase BADSM9389_RS00395 PF00582 Universal stress protein family BADSM9389_RS00400 PF10625 Universal stress protein B (UspB) BADSM9389_RS00405 PF01384 Phosphate transporter family BADSM9389_RS00415 PF05977 Transmembrane secretion effector BADSM9389_RS00425 PF01594 AI-2E family transporter BADSM9389_RS00430 PF07690 Major Facilitator Superfamily BADSM9389_RS00435 PF08786 DcrB BADSM9389_RS00440 PF02592 Putative vitamin uptake transporter BADSM9389_RS00445 PF01206 Sulfurtransferase TusA BADSM9389_RS00450 PF03480 Bacterial extracellular solute-binding protein, family 7 BADSM9389_RS00460 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BADSM9389_RS00465 PF00403 Heavy-metal-associated domain BADSM9389_RS00470 PF07947 YhhN family BADSM9389_RS00475 PF10694 Protein of unknown function (DUF2500) BADSM9389_RS00480 PF06611 Protein of unknown function (DUF1145) BADSM9389_RS00490 PF00448 SRP54-type protein, GTPase domain BADSM9389_RS00490 PF02881 SRP54-type protein, helical bundle domain BADSM9389_RS00495 PF00005 ABC transporter BADSM9389_RS00500 PF18075 FtsX extracellular domain BADSM9389_RS00500 PF02687 FtsX-like permease family BADSM9389_RS00505 PF04545 Sigma-70, region 4 BADSM9389_RS00505 PF04542 Sigma-70 region 2 BADSM9389_RS00505 PF00140 Sigma-70 factor, region 1.2 BADSM9389_RS00510 PF13458 Periplasmic binding protein BADSM9389_RS00515 PF12568 Acetyltransferase (GNAT) domain, PanZ BADSM9389_RS00520 PF13458 Periplasmic binding protein BADSM9389_RS00525 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS00530 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS00530 PF11862 Domain of unknown function (DUF3382) BADSM9389_RS00535 PF00005 ABC transporter BADSM9389_RS00535 PF12399 Branched-chain amino acid ATP-binding cassette transporter BADSM9389_RS00540 PF00005 ABC transporter BADSM9389_RS00545 PF13416 Bacterial extracellular solute-binding protein BADSM9389_RS00550 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS00555 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS00560 PF17912 MalK OB fold domain BADSM9389_RS00560 PF00005 ABC transporter BADSM9389_RS00565 PF03009 Glycerophosphoryl diester phosphodiesterase family BADSM9389_RS00570 PF10956 Protein of unknown function (DUF2756) BADSM9389_RS00580 PF00583 Acetyltransferase (GNAT) family BADSM9389_RS00585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BADSM9389_RS00585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BADSM9389_RS00590 PF17954 Quercetinase C-terminal cupin domain BADSM9389_RS00590 PF02678 Pirin BADSM9389_RS00595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BADSM9389_RS00595 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS00600 PF01202 Shikimate kinase BADSM9389_RS00605 PF02447 GntP family permease BADSM9389_RS00610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BADSM9389_RS00610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BADSM9389_RS00620 PF13407 Periplasmic binding protein domain BADSM9389_RS00625 PF00005 ABC transporter BADSM9389_RS00630 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS00635 PF12833 Helix-turn-helix domain BADSM9389_RS00640 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BADSM9389_RS00645 PF00128 Alpha amylase, catalytic domain BADSM9389_RS00650 PF00155 Aminotransferase class I and II BADSM9389_RS00655 PF03824 High-affinity nickel-transport protein BADSM9389_RS00660 PF00708 Acylphosphatase BADSM9389_RS00660 PF07503 HypF finger BADSM9389_RS00660 PF01300 Telomere recombination BADSM9389_RS00660 PF17788 HypF Kae1-like domain BADSM9389_RS00665 PF01568 Molydopterin dinucleotide binding domain BADSM9389_RS00665 PF00384 Molybdopterin oxidoreductase BADSM9389_RS00665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BADSM9389_RS00670 PF12800 4Fe-4S binding domain BADSM9389_RS00670 PF13247 4Fe-4S dicluster domain BADSM9389_RS00675 PF01750 Hydrogenase maturation protease BADSM9389_RS00680 PF07450 Formate hydrogenlyase maturation protein HycH BADSM9389_RS00685 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BADSM9389_RS00690 PF12838 4Fe-4S dicluster domain BADSM9389_RS00695 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BADSM9389_RS00695 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BADSM9389_RS00695 PF00374 Nickel-dependent hydrogenase BADSM9389_RS00700 PF00146 NADH dehydrogenase BADSM9389_RS00705 PF00361 Proton-conducting membrane transporter BADSM9389_RS00710 PF13247 4Fe-4S dicluster domain BADSM9389_RS00715 PF11046 Transcriptional repressor of hyc and hyp operons BADSM9389_RS00720 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BADSM9389_RS00725 PF02492 CobW/HypB/UreG, nucleotide-binding domain BADSM9389_RS00730 PF01455 HupF/HypC family BADSM9389_RS00735 PF01924 Hydrogenase formation hypA family BADSM9389_RS00740 PF02769 AIR synthase related protein, C-terminal domain BADSM9389_RS00740 PF00586 AIR synthase related protein, N-terminal domain BADSM9389_RS00745 PF01590 GAF domain BADSM9389_RS00745 PF02954 Bacterial regulatory protein, Fis family BADSM9389_RS00745 PF00158 Sigma-54 interaction domain BADSM9389_RS00750 PF01844 HNH endonuclease BADSM9389_RS00755 PF00953 Glycosyl transferase family 4 BADSM9389_RS00760 PF10531 SLBB domain BADSM9389_RS00760 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BADSM9389_RS00760 PF02563 Polysaccharide biosynthesis/export protein BADSM9389_RS00765 PF01451 Low molecular weight phosphotyrosine protein phosphatase BADSM9389_RS00770 PF02706 Chain length determinant protein BADSM9389_RS00770 PF13614 AAA domain BADSM9389_RS00770 PF13807 G-rich domain on putative tyrosine kinase BADSM9389_RS00800 PF14052 Capsule assembly protein Wzi BADSM9389_RS00805 PF00953 Glycosyl transferase family 4 BADSM9389_RS00810 PF02563 Polysaccharide biosynthesis/export protein BADSM9389_RS00810 PF10531 SLBB domain BADSM9389_RS00810 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BADSM9389_RS00815 PF01451 Low molecular weight phosphotyrosine protein phosphatase BADSM9389_RS00820 PF02706 Chain length determinant protein BADSM9389_RS00820 PF13807 G-rich domain on putative tyrosine kinase BADSM9389_RS00820 PF13614 AAA domain BADSM9389_RS00840 PF06082 Exopolysaccharide biosynthesis protein YbjH BADSM9389_RS00845 PF00672 HAMP domain BADSM9389_RS00845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BADSM9389_RS00845 PF02203 Tar ligand binding domain homologue BADSM9389_RS00855 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS00875 PF07944 Beta-L-arabinofuranosidase, GH127 BADSM9389_RS00880 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS00880 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS00885 PF11742 Protein of unknown function (DUF3302) BADSM9389_RS00890 PF15977 Winged helix-turn-helix DNA binding BADSM9389_RS00895 PF00691 OmpA family BADSM9389_RS00895 PF01389 OmpA-like transmembrane domain BADSM9389_RS00900 PF00480 ROK family BADSM9389_RS00905 PF00171 Aldehyde dehydrogenase family BADSM9389_RS00910 PF09106 Elongation factor SelB, winged helix BADSM9389_RS00910 PF00009 Elongation factor Tu GTP binding domain BADSM9389_RS00910 PF09107 Elongation factor SelB, winged helix BADSM9389_RS00910 PF03144 Elongation factor Tu domain 2 BADSM9389_RS00915 PF12390 Selenocysteine synthase N terminal BADSM9389_RS00915 PF03841 L-seryl-tRNA selenium transferase BADSM9389_RS00920 PF13417 Glutathione S-transferase, N-terminal domain BADSM9389_RS00920 PF00043 Glutathione S-transferase, C-terminal domain BADSM9389_RS00925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS00925 PF02378 Phosphotransferase system, EIIC BADSM9389_RS00925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS00930 PF01232 Mannitol dehydrogenase Rossmann domain BADSM9389_RS00930 PF08125 Mannitol dehydrogenase C-terminal domain BADSM9389_RS00935 PF05068 Mannitol repressor BADSM9389_RS00940 PF10928 Protein of unknown function (DUF2810) BADSM9389_RS00945 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BADSM9389_RS00950 PF01381 Helix-turn-helix BADSM9389_RS00955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BADSM9389_RS00955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BADSM9389_RS00960 PF07690 Major Facilitator Superfamily BADSM9389_RS00965 PF00294 pfkB family carbohydrate kinase BADSM9389_RS00975 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS00980 PF00857 Isochorismatase family BADSM9389_RS00995 PF01757 Acyltransferase family BADSM9389_RS01005 PF02091 Glycyl-tRNA synthetase alpha subunit BADSM9389_RS01010 PF02092 Glycyl-tRNA synthetase beta subunit BADSM9389_RS01010 PF05746 DALR anticodon binding domain BADSM9389_RS01015 PF00582 Universal stress protein family BADSM9389_RS01020 PF01381 Helix-turn-helix BADSM9389_RS01025 PF07690 Major Facilitator Superfamily BADSM9389_RS01030 PF11254 Protein of unknown function (DUF3053) BADSM9389_RS01035 PF00313 'Cold-shock' DNA-binding domain BADSM9389_RS01040 PF03475 3-alpha domain BADSM9389_RS01040 PF03473 MOSC domain BADSM9389_RS01045 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BADSM9389_RS01045 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BADSM9389_RS01055 PF06379 L-rhamnose-proton symport protein (RhaT) BADSM9389_RS01060 PF12833 Helix-turn-helix domain BADSM9389_RS01060 PF02311 AraC-like ligand binding domain BADSM9389_RS01065 PF12833 Helix-turn-helix domain BADSM9389_RS01065 PF02311 AraC-like ligand binding domain BADSM9389_RS01070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BADSM9389_RS01070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BADSM9389_RS01075 PF06134 L-rhamnose isomerase (RhaA) BADSM9389_RS01080 PF00596 Class II Aldolase and Adducin N-terminal domain BADSM9389_RS01085 PF13407 Periplasmic binding protein domain BADSM9389_RS01090 PF00005 ABC transporter BADSM9389_RS01095 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS01100 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS01105 PF00465 Iron-containing alcohol dehydrogenase BADSM9389_RS01110 PF05336 L-rhamnose mutarotase BADSM9389_RS01125 PF04717 Type VI secretion system, phage-baseplate injector BADSM9389_RS01130 PF01584 CheW-like domain BADSM9389_RS01130 PF00072 Response regulator receiver domain BADSM9389_RS01140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS01150 PF01116 Fructose-bisphosphate aldolase class-II BADSM9389_RS01165 PF00365 Phosphofructokinase BADSM9389_RS01170 PF12464 Maltose acetyltransferase BADSM9389_RS01170 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS01175 PF01306 LacY proton/sugar symporter BADSM9389_RS01180 PF16874 Glycosyl hydrolase family 36 C-terminal domain BADSM9389_RS01180 PF16875 Glycosyl hydrolase family 36 N-terminal domain BADSM9389_RS01185 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS01185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BADSM9389_RS01190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS01195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS01195 PF02378 Phosphotransferase system, EIIC BADSM9389_RS01200 PF05343 M42 glutamyl aminopeptidase BADSM9389_RS01205 PF08279 HTH domain BADSM9389_RS01205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS01210 PF02634 FdhD/NarQ family BADSM9389_RS01220 PF13247 4Fe-4S dicluster domain BADSM9389_RS01220 PF09163 Formate dehydrogenase N, transmembrane BADSM9389_RS01225 PF01292 Prokaryotic cytochrome b561 BADSM9389_RS01230 PF04216 Protein involved in formate dehydrogenase formation BADSM9389_RS01235 PF07859 alpha/beta hydrolase fold BADSM9389_RS01260 PF06004 Bacterial protein of unknown function (DUF903) BADSM9389_RS01310 PF01055 Glycosyl hydrolases family 31 BADSM9389_RS01310 PF13802 Galactose mutarotase-like BADSM9389_RS01315 PF01914 MarC family integral membrane protein BADSM9389_RS01320 PF01118 Semialdehyde dehydrogenase, NAD binding domain BADSM9389_RS01320 PF02774 Semialdehyde dehydrogenase, dimerisation domain BADSM9389_RS01325 PF02806 Alpha amylase, C-terminal all-beta domain BADSM9389_RS01325 PF00128 Alpha amylase, catalytic domain BADSM9389_RS01325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BADSM9389_RS01330 PF18390 Glycogen debranching enzyme C-terminal domain BADSM9389_RS01330 PF00128 Alpha amylase, catalytic domain BADSM9389_RS01330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BADSM9389_RS01335 PF00483 Nucleotidyl transferase BADSM9389_RS01340 PF00534 Glycosyl transferases group 1 BADSM9389_RS01340 PF08323 Starch synthase catalytic domain BADSM9389_RS01345 PF00343 Carbohydrate phosphorylase BADSM9389_RS01350 PF08220 DeoR-like helix-turn-helix domain BADSM9389_RS01350 PF00455 DeoR C terminal sensor domain BADSM9389_RS01355 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BADSM9389_RS01355 PF01694 Rhomboid family BADSM9389_RS01360 PF00581 Rhodanese-like domain BADSM9389_RS01365 PF01266 FAD dependent oxidoreductase BADSM9389_RS01365 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BADSM9389_RS01370 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS01370 PF17874 MalT-like TPR region BADSM9389_RS01375 PF00343 Carbohydrate phosphorylase BADSM9389_RS01380 PF02446 4-alpha-glucanotransferase BADSM9389_RS01385 PF01521 Iron-sulphur cluster biosynthesis BADSM9389_RS01385 PF01106 NifU-like domain BADSM9389_RS01390 PF00156 Phosphoribosyl transferase domain BADSM9389_RS01395 PF00561 alpha/beta hydrolase fold BADSM9389_RS01400 PF09012 FeoC like transcriptional regulator BADSM9389_RS01405 PF07664 Ferrous iron transport protein B C terminus BADSM9389_RS01405 PF17910 FeoB cytosolic helical domain BADSM9389_RS01405 PF07670 Nucleoside recognition BADSM9389_RS01405 PF02421 Ferrous iron transport protein B BADSM9389_RS01410 PF04023 FeoA domain BADSM9389_RS01415 PF17674 HHH domain BADSM9389_RS01415 PF16921 Tex protein YqgF-like domain BADSM9389_RS01415 PF09371 Tex-like protein N-terminal domain BADSM9389_RS01415 PF00575 S1 RNA binding domain BADSM9389_RS01420 PF01272 Transcription elongation factor, GreA/GreB, C-term BADSM9389_RS01420 PF03449 Transcription elongation factor, N-terminal BADSM9389_RS01425 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS01425 PF00072 Response regulator receiver domain BADSM9389_RS01430 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS01430 PF00672 HAMP domain BADSM9389_RS01455 PF04717 Type VI secretion system, phage-baseplate injector BADSM9389_RS01460 PF01293 Phosphoenolpyruvate carboxykinase BADSM9389_RS01465 PF01430 Hsp33 protein BADSM9389_RS01470 PF01479 S4 domain BADSM9389_RS01475 PF13419 Haloacid dehalogenase-like hydrolase BADSM9389_RS01480 PF07095 Intracellular growth attenuator protein IgaA BADSM9389_RS01485 PF00293 NUDIX domain BADSM9389_RS01490 PF00905 Penicillin binding protein transpeptidase domain BADSM9389_RS01490 PF17092 Penicillin-binding protein OB-like domain BADSM9389_RS01490 PF00912 Transglycosylase BADSM9389_RS01515 PF00263 Bacterial type II and III secretion system protein BADSM9389_RS01515 PF03958 Bacterial type II/III secretion system short domain BADSM9389_RS01520 PF01202 Shikimate kinase BADSM9389_RS01525 PF01761 3-dehydroquinate synthase BADSM9389_RS01530 PF05036 Sporulation related domain BADSM9389_RS01535 PF02086 D12 class N6 adenine-specific DNA methyltransferase BADSM9389_RS01540 PF00834 Ribulose-phosphate 3 epimerase family BADSM9389_RS01545 PF13419 Haloacid dehalogenase-like hydrolase BADSM9389_RS01550 PF00579 tRNA synthetases class I (W and Y) BADSM9389_RS01555 PF14503 YhfZ C-terminal domain BADSM9389_RS01555 PF14502 Helix-turn-helix domain BADSM9389_RS01565 PF01168 Alanine racemase, N-terminal domain BADSM9389_RS01570 PF01676 Metalloenzyme superfamily BADSM9389_RS01575 PF02126 Phosphotriesterase family BADSM9389_RS01580 PF10941 Protein of unknown function DUF2620 BADSM9389_RS01585 PF10797 Protein of unknown function BADSM9389_RS01590 PF00155 Aminotransferase class I and II BADSM9389_RS01595 PF13978 Protein of unknown function (DUF4223) BADSM9389_RS01600 PF10414 Sirohaem synthase dimerisation region BADSM9389_RS01600 PF14824 Sirohaem biosynthesis protein central BADSM9389_RS01600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BADSM9389_RS01605 PF01226 Formate/nitrite transporter BADSM9389_RS01610 PF13806 Rieske-like [2Fe-2S] domain BADSM9389_RS01615 PF18267 Rubredoxin NAD+ reductase C-terminal domain BADSM9389_RS01615 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS01615 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BADSM9389_RS01615 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BADSM9389_RS01615 PF04324 BFD-like [2Fe-2S] binding domain BADSM9389_RS01620 PF07969 Amidohydrolase family BADSM9389_RS01625 PF07690 Major Facilitator Superfamily BADSM9389_RS01630 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BADSM9389_RS01635 PF02661 Fic/DOC family BADSM9389_RS01640 PF00117 Glutamine amidotransferase class-I BADSM9389_RS01645 PF00202 Aminotransferase class-III BADSM9389_RS01650 PF12805 FUSC-like inner membrane protein yccS BADSM9389_RS01655 PF13545 Crp-like helix-turn-helix domain BADSM9389_RS01655 PF00027 Cyclic nucleotide-binding domain BADSM9389_RS01660 PF02566 OsmC-like protein BADSM9389_RS01665 PF00485 Phosphoribulokinase / Uridine kinase family BADSM9389_RS01670 PF06794 Uncharacterised protein family (UPF0270) BADSM9389_RS01675 PF00561 alpha/beta hydrolase fold BADSM9389_RS01685 PF00005 ABC transporter BADSM9389_RS01685 PF12848 ABC transporter BADSM9389_RS01690 PF02525 Flavodoxin-like fold BADSM9389_RS01695 PF00999 Sodium/hydrogen exchanger family BADSM9389_RS01695 PF02254 TrkA-N domain BADSM9389_RS01700 PF09526 Probable metal-binding protein (DUF2387) BADSM9389_RS01705 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BADSM9389_RS01710 PF04102 SlyX BADSM9389_RS01715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BADSM9389_RS01715 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BADSM9389_RS01720 PF13309 HTH domain BADSM9389_RS01720 PF08348 YheO-like PAS domain BADSM9389_RS01725 PF02635 DsrE/DsrF-like family BADSM9389_RS01730 PF02635 DsrE/DsrF-like family BADSM9389_RS01735 PF04077 DsrH like protein BADSM9389_RS01740 PF00164 Ribosomal protein S12/S23 BADSM9389_RS01745 PF00177 Ribosomal protein S7p/S5e BADSM9389_RS01750 PF03144 Elongation factor Tu domain 2 BADSM9389_RS01750 PF00009 Elongation factor Tu GTP binding domain BADSM9389_RS01750 PF03764 Elongation factor G, domain IV BADSM9389_RS01750 PF14492 Elongation Factor G, domain II BADSM9389_RS01750 PF00679 Elongation factor G C-terminus BADSM9389_RS01755 PF03144 Elongation factor Tu domain 2 BADSM9389_RS01755 PF00009 Elongation factor Tu GTP binding domain BADSM9389_RS01755 PF03143 Elongation factor Tu C-terminal domain BADSM9389_RS01760 PF04324 BFD-like [2Fe-2S] binding domain BADSM9389_RS01765 PF00210 Ferritin-like domain BADSM9389_RS01770 PF06750 Bacterial Peptidase A24 N-terminal domain BADSM9389_RS01770 PF01478 Type IV leader peptidase family BADSM9389_RS01775 PF00338 Ribosomal protein S10p/S20e BADSM9389_RS01780 PF00297 Ribosomal protein L3 BADSM9389_RS01785 PF00573 Ribosomal protein L4/L1 family BADSM9389_RS01790 PF00276 Ribosomal protein L23 BADSM9389_RS01795 PF00181 Ribosomal Proteins L2, RNA binding domain BADSM9389_RS01795 PF03947 Ribosomal Proteins L2, C-terminal domain BADSM9389_RS01800 PF00203 Ribosomal protein S19 BADSM9389_RS01805 PF00237 Ribosomal protein L22p/L17e BADSM9389_RS01810 PF00189 Ribosomal protein S3, C-terminal domain BADSM9389_RS01810 PF07650 KH domain BADSM9389_RS01815 PF00252 Ribosomal protein L16p/L10e BADSM9389_RS01820 PF00831 Ribosomal L29 protein BADSM9389_RS01825 PF00366 Ribosomal protein S17 BADSM9389_RS01830 PF00238 Ribosomal protein L14p/L23e BADSM9389_RS01835 PF00467 KOW motif BADSM9389_RS01835 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BADSM9389_RS01840 PF00281 Ribosomal protein L5 BADSM9389_RS01840 PF00673 ribosomal L5P family C-terminus BADSM9389_RS01845 PF00253 Ribosomal protein S14p/S29e BADSM9389_RS01850 PF00410 Ribosomal protein S8 BADSM9389_RS01855 PF00347 Ribosomal protein L6 BADSM9389_RS01860 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BADSM9389_RS01865 PF03719 Ribosomal protein S5, C-terminal domain BADSM9389_RS01865 PF00333 Ribosomal protein S5, N-terminal domain BADSM9389_RS01870 PF00327 Ribosomal protein L30p/L7e BADSM9389_RS01875 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BADSM9389_RS01880 PF00344 SecY translocase BADSM9389_RS01885 PF00444 Ribosomal protein L36 BADSM9389_RS01890 PF00416 Ribosomal protein S13/S18 BADSM9389_RS01895 PF00411 Ribosomal protein S11 BADSM9389_RS01900 PF00163 Ribosomal protein S4/S9 N-terminal domain BADSM9389_RS01900 PF01479 S4 domain BADSM9389_RS01905 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BADSM9389_RS01905 PF01000 RNA polymerase Rpb3/RpoA insert domain BADSM9389_RS01905 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BADSM9389_RS01910 PF01196 Ribosomal protein L17 BADSM9389_RS01915 PF13411 MerR HTH family regulatory protein BADSM9389_RS01920 PF03889 Alternative ribosome-rescue factor A BADSM9389_RS01925 PF01741 Large-conductance mechanosensitive channel, MscL BADSM9389_RS01930 PF02254 TrkA-N domain BADSM9389_RS01930 PF02080 TrkA-C domain BADSM9389_RS01935 PF01189 16S rRNA methyltransferase RsmB/F BADSM9389_RS01935 PF01029 NusB family BADSM9389_RS01940 PF02911 Formyl transferase, C-terminal domain BADSM9389_RS01940 PF00551 Formyl transferase BADSM9389_RS01945 PF01327 Polypeptide deformylase BADSM9389_RS01950 PF17782 DprA winged helix domain BADSM9389_RS01950 PF02481 DNA recombination-mediator protein A BADSM9389_RS01955 PF04361 Protein of unknown function (DUF494) BADSM9389_RS01960 PF01396 Topoisomerase DNA binding C4 zinc finger BADSM9389_RS01965 PF01300 Telomere recombination BADSM9389_RS01970 PF08501 Shikimate dehydrogenase substrate binding domain BADSM9389_RS01970 PF01488 Shikimate / quinate 5-dehydrogenase BADSM9389_RS01970 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BADSM9389_RS01975 PF07369 Protein of unknown function (DUF1488) BADSM9389_RS01980 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS02020 PF00005 ABC transporter BADSM9389_RS02025 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS02030 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS02035 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS02045 PF08986 Domain of unknown function (DUF1889) BADSM9389_RS02085 PF02954 Bacterial regulatory protein, Fis family BADSM9389_RS02090 PF01207 Dihydrouridine synthase (Dus) BADSM9389_RS02095 PF00194 Eukaryotic-type carbonic anhydrase BADSM9389_RS02105 PF00474 Sodium:solute symporter family BADSM9389_RS02110 PF06196 Protein of unknown function (DUF997) BADSM9389_RS02115 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BADSM9389_RS02115 PF00289 Biotin carboxylase, N-terminal domain BADSM9389_RS02115 PF02785 Biotin carboxylase C-terminal domain BADSM9389_RS02120 PF00364 Biotin-requiring enzyme BADSM9389_RS02125 PF01220 Dehydroquinase class II BADSM9389_RS02130 PF01794 Ferric reductase like transmembrane component BADSM9389_RS02135 PF00174 Oxidoreductase molybdopterin binding domain BADSM9389_RS02140 PF17157 Gammaproteobacterial periplasmic sensor domain BADSM9389_RS02140 PF00563 EAL domain BADSM9389_RS02140 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS02150 PF04085 rod shape-determining protein MreC BADSM9389_RS02155 PF04093 rod shape-determining protein MreD BADSM9389_RS02160 PF02545 Maf-like protein BADSM9389_RS02165 PF10150 Ribonuclease E/G family BADSM9389_RS02165 PF00575 S1 RNA binding domain BADSM9389_RS02170 PF13502 AsmA-like C-terminal region BADSM9389_RS02170 PF13116 Protein of unknown function BADSM9389_RS02175 PF01523 Putative modulator of DNA gyrase BADSM9389_RS02180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS02180 PF03466 LysR substrate binding domain BADSM9389_RS02185 PF07869 Protein of unknown function (DUF1656) BADSM9389_RS02190 PF13533 Biotin-lipoyl like BADSM9389_RS02195 PF04632 Fusaric acid resistance protein family BADSM9389_RS02200 PF00171 Aldehyde dehydrogenase family BADSM9389_RS02205 PF01337 Barstar (barnase inhibitor) BADSM9389_RS02210 PF07338 Protein of unknown function (DUF1471) BADSM9389_RS02215 PF07338 Protein of unknown function (DUF1471) BADSM9389_RS02220 PF01316 Arginine repressor, DNA binding domain BADSM9389_RS02220 PF02863 Arginine repressor, C-terminal domain BADSM9389_RS02225 PF00056 lactate/malate dehydrogenase, NAD binding domain BADSM9389_RS02225 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BADSM9389_RS02230 PF13180 PDZ domain BADSM9389_RS02235 PF13180 PDZ domain BADSM9389_RS02235 PF00595 PDZ domain BADSM9389_RS02240 PF06295 Protein of unknown function (DUF1043) BADSM9389_RS02245 PF03969 AFG1-like ATPase BADSM9389_RS02250 PF00572 Ribosomal protein L13 BADSM9389_RS02255 PF00380 Ribosomal protein S9/S16 BADSM9389_RS02260 PF00043 Glutathione S-transferase, C-terminal domain BADSM9389_RS02260 PF02798 Glutathione S-transferase, N-terminal domain BADSM9389_RS02265 PF04386 Stringent starvation protein B BADSM9389_RS02270 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS02270 PF07729 FCD domain BADSM9389_RS02275 PF00701 Dihydrodipicolinate synthetase family BADSM9389_RS02280 PF07690 Major Facilitator Superfamily BADSM9389_RS02285 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BADSM9389_RS02285 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS02290 PF00310 Glutamine amidotransferases class-II BADSM9389_RS02290 PF04898 Glutamate synthase central domain BADSM9389_RS02290 PF01645 Conserved region in glutamate synthase BADSM9389_RS02290 PF01493 GXGXG motif BADSM9389_RS02295 PF04055 Radical SAM superfamily BADSM9389_RS02295 PF16199 Radical_SAM C-terminal domain BADSM9389_RS02300 PF00072 Response regulator receiver domain BADSM9389_RS02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS02300 PF00989 PAS fold BADSM9389_RS02300 PF01627 Hpt domain BADSM9389_RS02300 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS02300 PF18415 Histidine kinase receptor ArcB trans-membrane domain BADSM9389_RS02310 PF00912 Transglycosylase BADSM9389_RS02315 PF00381 PTS HPr component phosphorylation site BADSM9389_RS02320 PF03668 P-loop ATPase protein family BADSM9389_RS02325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS02330 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BADSM9389_RS02335 PF00309 Sigma-54 factor, Activator interacting domain (AID) BADSM9389_RS02335 PF04552 Sigma-54, DNA binding domain BADSM9389_RS02335 PF04963 Sigma-54 factor, core binding domain BADSM9389_RS02340 PF12399 Branched-chain amino acid ATP-binding cassette transporter BADSM9389_RS02340 PF00005 ABC transporter BADSM9389_RS02345 PF03968 OstA-like protein BADSM9389_RS02350 PF06835 Lipopolysaccharide-assembly, LptC-related BADSM9389_RS02360 PF01380 SIS domain BADSM9389_RS02360 PF00571 CBS domain BADSM9389_RS02365 PF01699 Sodium/calcium exchanger protein BADSM9389_RS02370 PF00005 ABC transporter BADSM9389_RS02375 PF02405 Permease MlaE BADSM9389_RS02380 PF02470 MlaD protein BADSM9389_RS02385 PF05494 MlaC protein BADSM9389_RS02390 PF13466 STAS domain BADSM9389_RS02395 PF01722 BolA-like protein BADSM9389_RS02400 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BADSM9389_RS02405 PF13693 Winged helix-turn-helix DNA-binding BADSM9389_RS02410 PF00348 Polyprenyl synthetase BADSM9389_RS02415 PF00829 Ribosomal prokaryotic L21 protein BADSM9389_RS02420 PF01016 Ribosomal L27 protein BADSM9389_RS02425 PF00892 EamA-like transporter family BADSM9389_RS02430 PF01018 GTP1/OBG BADSM9389_RS02430 PF01926 50S ribosome-binding GTPase BADSM9389_RS02435 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS02435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS02435 PF00672 HAMP domain BADSM9389_RS02440 PF00072 Response regulator receiver domain BADSM9389_RS02440 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS02445 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BADSM9389_RS02450 PF03449 Transcription elongation factor, N-terminal BADSM9389_RS02450 PF01272 Transcription elongation factor, GreA/GreB, C-term BADSM9389_RS02455 PF01985 CRS1 / YhbY (CRM) domain BADSM9389_RS02460 PF01728 FtsJ-like methyltransferase BADSM9389_RS02465 PF01434 Peptidase family M41 BADSM9389_RS02465 PF06480 FtsH Extracellular BADSM9389_RS02465 PF00004 ATPase family associated with various cellular activities (AAA) BADSM9389_RS02465 PF17862 AAA+ lid domain BADSM9389_RS02470 PF00809 Pterin binding enzyme BADSM9389_RS02475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BADSM9389_RS02475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BADSM9389_RS02475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BADSM9389_RS02475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BADSM9389_RS02480 PF03840 Preprotein translocase SecG subunit BADSM9389_RS02495 PF02576 RimP N-terminal domain BADSM9389_RS02495 PF17384 RimP C-terminal SH3 domain BADSM9389_RS02500 PF00575 S1 RNA binding domain BADSM9389_RS02500 PF08529 NusA N-terminal domain BADSM9389_RS02500 PF13184 NusA-like KH domain BADSM9389_RS02505 PF00009 Elongation factor Tu GTP binding domain BADSM9389_RS02505 PF04760 Translation initiation factor IF-2, N-terminal region BADSM9389_RS02505 PF08364 Bacterial translation initiation factor IF-2 associated region BADSM9389_RS02505 PF11987 Translation-initiation factor 2 BADSM9389_RS02510 PF02033 Ribosome-binding factor A BADSM9389_RS02515 PF01509 TruB family pseudouridylate synthase (N terminal domain) BADSM9389_RS02515 PF16198 tRNA pseudouridylate synthase B C-terminal domain BADSM9389_RS02515 PF09157 Pseudouridine synthase II TruB, C-terminal BADSM9389_RS02520 PF00312 Ribosomal protein S15 BADSM9389_RS02525 PF00013 KH domain BADSM9389_RS02525 PF00575 S1 RNA binding domain BADSM9389_RS02525 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BADSM9389_RS02525 PF01138 3' exoribonuclease family, domain 1 BADSM9389_RS02525 PF03725 3' exoribonuclease family, domain 2 BADSM9389_RS02530 PF07719 Tetratricopeptide repeat BADSM9389_RS02530 PF13181 Tetratricopeptide repeat BADSM9389_RS02540 PF00271 Helicase conserved C-terminal domain BADSM9389_RS02540 PF03880 DbpA RNA binding domain BADSM9389_RS02540 PF12343 Cold shock protein DEAD box A BADSM9389_RS02540 PF00270 DEAD/DEAH box helicase BADSM9389_RS02545 PF03222 Tryptophan/tyrosine permease family BADSM9389_RS02550 PF00296 Luciferase-like monooxygenase BADSM9389_RS02555 PF01136 Peptidase family U32 BADSM9389_RS02560 PF01136 Peptidase family U32 BADSM9389_RS02565 PF02036 SCP-2 sterol transfer family BADSM9389_RS02570 PF13508 Acetyltransferase (GNAT) domain BADSM9389_RS02575 PF01541 GIY-YIG catalytic domain BADSM9389_RS02585 PF13460 NAD(P)H-binding BADSM9389_RS02595 PF13597 Anaerobic ribonucleoside-triphosphate reductase BADSM9389_RS02595 PF03477 ATP cone domain BADSM9389_RS02600 PF00128 Alpha amylase, catalytic domain BADSM9389_RS02600 PF11941 Domain of unknown function (DUF3459) BADSM9389_RS02605 PF00367 phosphotransferase system, EIIB BADSM9389_RS02605 PF02378 Phosphotransferase system, EIIC BADSM9389_RS02610 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS02615 PF00689 Cation transporting ATPase, C-terminus BADSM9389_RS02615 PF00690 Cation transporter/ATPase, N-terminus BADSM9389_RS02620 PF00728 Glycosyl hydrolase family 20, catalytic domain BADSM9389_RS02620 PF02838 Glycosyl hydrolase family 20, domain 2 BADSM9389_RS02620 PF07691 PA14 domain BADSM9389_RS02625 PF01042 Endoribonuclease L-PSP BADSM9389_RS02630 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BADSM9389_RS02630 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BADSM9389_RS02635 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BADSM9389_RS02635 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BADSM9389_RS02640 PF13520 Amino acid permease BADSM9389_RS02645 PF01276 Orn/Lys/Arg decarboxylase, major domain BADSM9389_RS02645 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BADSM9389_RS02645 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BADSM9389_RS02655 PF04074 YhcH/YjgK/YiaL BADSM9389_RS02660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BADSM9389_RS02660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BADSM9389_RS02665 PF06877 Regulator of ribonuclease activity B BADSM9389_RS02670 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) BADSM9389_RS02675 PF00583 Acetyltransferase (GNAT) family BADSM9389_RS02680 PF05987 Bacterial protein of unknown function (DUF898) BADSM9389_RS02685 PF00133 tRNA synthetases class I (I, L, M and V) BADSM9389_RS02685 PF10458 Valyl tRNA synthetase tRNA binding arm BADSM9389_RS02685 PF08264 Anticodon-binding domain of tRNA BADSM9389_RS02690 PF04364 DNA polymerase III chi subunit, HolC BADSM9389_RS02695 PF02789 Cytosol aminopeptidase family, N-terminal domain BADSM9389_RS02695 PF00883 Cytosol aminopeptidase family, catalytic domain BADSM9389_RS02700 PF03739 Lipopolysaccharide export system permease LptF/LptG BADSM9389_RS02705 PF03739 Lipopolysaccharide export system permease LptF/LptG BADSM9389_RS02710 PF05872 Bacterial protein of unknown function (DUF853) BADSM9389_RS02715 PF02734 DAK2 domain BADSM9389_RS02715 PF02733 Dak1 domain BADSM9389_RS02720 PF01863 Protein of unknown function DUF45 BADSM9389_RS02725 PF05175 Methyltransferase small domain BADSM9389_RS02730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BADSM9389_RS02730 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS02740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BADSM9389_RS02740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BADSM9389_RS02745 PF04198 Putative sugar-binding domain BADSM9389_RS02750 PF00005 ABC transporter BADSM9389_RS02755 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS02760 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS02765 PF13407 Periplasmic binding protein domain BADSM9389_RS02770 PF01791 DeoC/LacD family aldolase BADSM9389_RS02775 PF03992 Antibiotic biosynthesis monooxygenase BADSM9389_RS02780 PF00202 Aminotransferase class-III BADSM9389_RS02785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS02785 PF00005 ABC transporter BADSM9389_RS02790 PF00005 ABC transporter BADSM9389_RS02790 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS02800 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS02805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS02810 PF08946 Osmosensory transporter coiled coil BADSM9389_RS02810 PF00083 Sugar (and other) transporter BADSM9389_RS02815 PF08447 PAS fold BADSM9389_RS02815 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BADSM9389_RS02820 PF16884 N-terminal domain of oxidoreductase BADSM9389_RS02820 PF00107 Zinc-binding dehydrogenase BADSM9389_RS02825 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS02830 PF02378 Phosphotransferase system, EIIC BADSM9389_RS02830 PF00367 phosphotransferase system, EIIB BADSM9389_RS02835 PF00232 Glycosyl hydrolase family 1 BADSM9389_RS02845 PF10696 Protein of unknown function (DUF2501) BADSM9389_RS02855 PF12821 Threonine/Serine exporter, ThrE BADSM9389_RS02860 PF06738 Putative threonine/serine exporter BADSM9389_RS02865 PF01494 FAD binding domain BADSM9389_RS02870 PF12833 Helix-turn-helix domain BADSM9389_RS02880 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS02885 PF04073 Aminoacyl-tRNA editing domain BADSM9389_RS02890 PF02378 Phosphotransferase system, EIIC BADSM9389_RS02895 PF11575 FhuF 2Fe-2S C-terminal domain BADSM9389_RS02895 PF06276 Ferric iron reductase FhuF-like transporter BADSM9389_RS02900 PF17158 Membrane-associated sensor, integral membrane domain BADSM9389_RS02900 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS02905 PF07256 Protein of unknown function (DUF1435) BADSM9389_RS02925 PF05175 Methyltransferase small domain BADSM9389_RS02925 PF08468 Methyltransferase small domain N-terminal BADSM9389_RS02930 PF03603 DNA polymerase III psi subunit BADSM9389_RS02935 PF00583 Acetyltransferase (GNAT) family BADSM9389_RS02940 PF13419 Haloacid dehalogenase-like hydrolase BADSM9389_RS02945 PF00009 Elongation factor Tu GTP binding domain BADSM9389_RS02945 PF03144 Elongation factor Tu domain 2 BADSM9389_RS02945 PF16658 Class II release factor RF3, C-terminal domain BADSM9389_RS02950 PF04972 BON domain BADSM9389_RS02955 PF07043 Protein of unknown function (DUF1328) BADSM9389_RS02960 PF01734 Patatin-like phospholipase BADSM9389_RS02965 PF01026 TatD related DNase BADSM9389_RS02970 PF07670 Nucleoside recognition BADSM9389_RS02970 PF07662 Na+ dependent nucleoside transporter C-terminus BADSM9389_RS02970 PF01773 Na+ dependent nucleoside transporter N-terminus BADSM9389_RS02975 PF01791 DeoC/LacD family aldolase BADSM9389_RS02980 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BADSM9389_RS02980 PF02885 Glycosyl transferase family, helical bundle domain BADSM9389_RS02980 PF00591 Glycosyl transferase family, a/b domain BADSM9389_RS02985 PF01676 Metalloenzyme superfamily BADSM9389_RS02990 PF01048 Phosphorylase superfamily BADSM9389_RS02995 PF07804 HipA-like C-terminal domain BADSM9389_RS03000 PF03099 Biotin/lipoate A/B protein ligase family BADSM9389_RS03000 PF10437 Bacterial lipoate protein ligase C-terminus BADSM9389_RS03005 PF10144 Bacterial virulence factor haemolysin BADSM9389_RS03010 PF18429 Domain of unknown function (DUF5609) BADSM9389_RS03015 PF18073 Rubredoxin metal binding domain BADSM9389_RS03020 PF13521 AAA domain BADSM9389_RS03020 PF01381 Helix-turn-helix BADSM9389_RS03025 PF00005 ABC transporter BADSM9389_RS03025 PF12848 ABC transporter BADSM9389_RS03030 PF01464 Transglycosylase SLT domain BADSM9389_RS03030 PF14718 Soluble lytic murein transglycosylase L domain BADSM9389_RS03035 PF01371 Trp repressor protein BADSM9389_RS03040 PF01931 Protein of unknown function DUF84 BADSM9389_RS03045 PF00300 Histidine phosphatase superfamily (branch 1) BADSM9389_RS03050 PF06445 GyrI-like small molecule binding domain BADSM9389_RS03050 PF12833 Helix-turn-helix domain BADSM9389_RS03055 PF05981 CreA protein BADSM9389_RS03060 PF00072 Response regulator receiver domain BADSM9389_RS03060 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS03065 PF00672 HAMP domain BADSM9389_RS03065 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS03065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS03070 PF06123 Inner membrane protein CreD BADSM9389_RS03075 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS03075 PF00072 Response regulator receiver domain BADSM9389_RS03085 PF00588 SpoU rRNA Methylase family BADSM9389_RS03095 PF00696 Amino acid kinase family BADSM9389_RS03095 PF01842 ACT domain BADSM9389_RS03095 PF13840 ACT domain BADSM9389_RS03095 PF00742 Homoserine dehydrogenase BADSM9389_RS03095 PF03447 Homoserine dehydrogenase, NAD binding domain BADSM9389_RS03100 PF00288 GHMP kinases N terminal domain BADSM9389_RS03100 PF08544 GHMP kinases C terminal BADSM9389_RS03105 PF00291 Pyridoxal-phosphate dependent enzyme BADSM9389_RS03105 PF14821 Threonine synthase N terminus BADSM9389_RS03110 PF10697 Protein of unknown function (DUF2502) BADSM9389_RS03115 PF03883 Peroxide stress protein YaaA BADSM9389_RS03120 PF01235 Sodium:alanine symporter family BADSM9389_RS03125 PF00923 Transaldolase/Fructose-6-phosphate aldolase BADSM9389_RS03130 PF00994 Probable molybdopterin binding domain BADSM9389_RS03135 PF07690 Major Facilitator Superfamily BADSM9389_RS03140 PF01184 GPR1/FUN34/yaaH family BADSM9389_RS03150 PF00012 Hsp70 protein BADSM9389_RS03155 PF01556 DnaJ C terminal domain BADSM9389_RS03155 PF00684 DnaJ central domain BADSM9389_RS03155 PF00226 DnaJ domain BADSM9389_RS03160 PF06965 Na+/H+ antiporter 1 BADSM9389_RS03165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS03165 PF03466 LysR substrate binding domain BADSM9389_RS03170 PF01649 Ribosomal protein S20 BADSM9389_RS03175 PF06574 FAD synthetase BADSM9389_RS03175 PF01687 Riboflavin kinase BADSM9389_RS03180 PF06827 Zinc finger found in FPG and IleRS BADSM9389_RS03180 PF00133 tRNA synthetases class I (I, L, M and V) BADSM9389_RS03180 PF08264 Anticodon-binding domain of tRNA BADSM9389_RS03185 PF01252 Signal peptidase (SPase) II BADSM9389_RS03190 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BADSM9389_RS03195 PF02401 LytB protein BADSM9389_RS03205 PF00701 Dihydrodipicolinate synthetase family BADSM9389_RS03210 PF00920 Dehydratase family BADSM9389_RS03215 PF07690 Major Facilitator Superfamily BADSM9389_RS03220 PF00083 Sugar (and other) transporter BADSM9389_RS03225 PF01081 KDPG and KHG aldolase BADSM9389_RS03230 PF05035 2-keto-3-deoxy-galactonokinase BADSM9389_RS03235 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS03235 PF07729 FCD domain BADSM9389_RS03240 PF01156 Inosine-uridine preferring nucleoside hydrolase BADSM9389_RS03245 PF06560 Glucose-6-phosphate isomerase (GPI) BADSM9389_RS03255 PF03613 PTS system mannose/fructose/sorbose family IID component BADSM9389_RS03260 PF03609 PTS system sorbose-specific iic component BADSM9389_RS03265 PF03830 PTS system sorbose subfamily IIB component BADSM9389_RS03265 PF03610 PTS system fructose IIA component BADSM9389_RS03280 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BADSM9389_RS03280 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS03295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BADSM9389_RS03295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BADSM9389_RS03305 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BADSM9389_RS03305 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BADSM9389_RS03310 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS03315 PF01113 Dihydrodipicolinate reductase, N-terminus BADSM9389_RS03315 PF05173 Dihydrodipicolinate reductase, C-terminus BADSM9389_RS03320 PF00117 Glutamine amidotransferase class-I BADSM9389_RS03320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BADSM9389_RS03325 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BADSM9389_RS03325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BADSM9389_RS03325 PF02142 MGS-like domain BADSM9389_RS03330 PF06004 Bacterial protein of unknown function (DUF903) BADSM9389_RS03335 PF02525 Flavodoxin-like fold BADSM9389_RS03340 PF02254 TrkA-N domain BADSM9389_RS03340 PF00999 Sodium/hydrogen exchanger family BADSM9389_RS03345 PF01810 LysE type translocator BADSM9389_RS03350 PF00186 Dihydrofolate reductase BADSM9389_RS03355 PF00149 Calcineurin-like phosphoesterase BADSM9389_RS03360 PF04379 ApaG domain BADSM9389_RS03365 PF00398 Ribosomal RNA adenine dimethylase BADSM9389_RS03370 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BADSM9389_RS03375 PF09312 SurA N-terminal domain BADSM9389_RS03375 PF00639 PPIC-type PPIASE domain BADSM9389_RS03380 PF03968 OstA-like protein BADSM9389_RS03380 PF04453 LPS transport system D BADSM9389_RS03385 PF00226 DnaJ domain BADSM9389_RS03385 PF05099 Tellurite resistance protein TerB BADSM9389_RS03390 PF00849 RNA pseudouridylate synthase BADSM9389_RS03395 PF12137 RNA polymerase recycling family C-terminal BADSM9389_RS03395 PF00176 SNF2 family N-terminal domain BADSM9389_RS03395 PF18339 RapA N-terminal Tudor like domain 1 BADSM9389_RS03395 PF18337 RapA N-terminal Tudor like domain BADSM9389_RS03395 PF00271 Helicase conserved C-terminal domain BADSM9389_RS03400 PF00136 DNA polymerase family B BADSM9389_RS03400 PF03104 DNA polymerase family B, exonuclease domain BADSM9389_RS03415 PF05638 Type VI secretion system effector, Hcp BADSM9389_RS03420 PF00596 Class II Aldolase and Adducin N-terminal domain BADSM9389_RS03425 PF02610 L-arabinose isomerase BADSM9389_RS03425 PF11762 L-arabinose isomerase C-terminal domain BADSM9389_RS03430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BADSM9389_RS03435 PF12833 Helix-turn-helix domain BADSM9389_RS03435 PF02311 AraC-like ligand binding domain BADSM9389_RS03440 PF09335 SNARE associated Golgi protein BADSM9389_RS03445 PF00005 ABC transporter BADSM9389_RS03450 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS03460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS03460 PF12793 Sugar transport-related sRNA regulator N-term BADSM9389_RS03470 PF07690 Major Facilitator Superfamily BADSM9389_RS03475 PF06969 HemN C-terminal domain BADSM9389_RS03475 PF04055 Radical SAM superfamily BADSM9389_RS03480 PF01725 Ham1 family BADSM9389_RS03485 PF02594 Uncharacterised ACR, YggU family COG1872 BADSM9389_RS03490 PF02325 YGGT family BADSM9389_RS03495 PF01168 Alanine racemase, N-terminal domain BADSM9389_RS03500 PF00437 Type II/IV secretion system protein BADSM9389_RS03510 PF03652 Holliday junction resolvase BADSM9389_RS03515 PF02622 Uncharacterized ACR, COG1678 BADSM9389_RS03520 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BADSM9389_RS03520 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BADSM9389_RS03525 PF04452 RNA methyltransferase BADSM9389_RS03530 PF04231 Endonuclease I BADSM9389_RS03535 PF10263 SprT-like family BADSM9389_RS03535 PF17283 SprT-like zinc ribbon domain BADSM9389_RS03540 PF00083 Sugar (and other) transporter BADSM9389_RS03545 PF02773 S-adenosylmethionine synthetase, C-terminal domain BADSM9389_RS03545 PF00438 S-adenosylmethionine synthetase, N-terminal domain BADSM9389_RS03545 PF02772 S-adenosylmethionine synthetase, central domain BADSM9389_RS03555 PF17944 Arginine decarboxylase C-terminal helical extension BADSM9389_RS03555 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BADSM9389_RS03555 PF17810 Arginine decarboxylase helical bundle domain BADSM9389_RS03560 PF00491 Arginase family BADSM9389_RS03565 PF01435 Peptidase family M48 BADSM9389_RS03570 PF02780 Transketolase, C-terminal domain BADSM9389_RS03570 PF02779 Transketolase, pyrimidine binding domain BADSM9389_RS03570 PF00456 Transketolase, thiamine diphosphate binding domain BADSM9389_RS03580 PF00593 TonB dependent receptor BADSM9389_RS03580 PF07715 TonB-dependent Receptor Plug Domain BADSM9389_RS03585 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS03590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS03590 PF02378 Phosphotransferase system, EIIC BADSM9389_RS03595 PF08240 Alcohol dehydrogenase GroES-like domain BADSM9389_RS03595 PF00107 Zinc-binding dehydrogenase BADSM9389_RS03600 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BADSM9389_RS03605 PF05068 Mannitol repressor BADSM9389_RS03615 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BADSM9389_RS03615 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BADSM9389_RS03620 PF00162 Phosphoglycerate kinase BADSM9389_RS03625 PF01116 Fructose-bisphosphate aldolase class-II BADSM9389_RS03630 PF03466 LysR substrate binding domain BADSM9389_RS03630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS03635 PF00291 Pyridoxal-phosphate dependent enzyme BADSM9389_RS03640 PF03222 Tryptophan/tyrosine permease family BADSM9389_RS03645 PF00871 Acetokinase family BADSM9389_RS03650 PF02901 Pyruvate formate lyase-like BADSM9389_RS03650 PF01228 Glycine radical BADSM9389_RS03655 PF00924 Mechanosensitive ion channel BADSM9389_RS03655 PF05552 Conserved TM helix BADSM9389_RS03660 PF01810 LysE type translocator BADSM9389_RS03665 PF04402 Protein of unknown function (DUF541) BADSM9389_RS03670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS03670 PF03466 LysR substrate binding domain BADSM9389_RS03675 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BADSM9389_RS03680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BADSM9389_RS03680 PF01842 ACT domain BADSM9389_RS03680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BADSM9389_RS03685 PF09997 Predicted membrane protein (DUF2238) BADSM9389_RS03690 PF01812 5-formyltetrahydrofolate cyclo-ligase family BADSM9389_RS03700 PF05164 Cell division protein ZapA BADSM9389_RS03705 PF03695 Uncharacterised protein family (UPF0149) BADSM9389_RS03710 PF05195 Aminopeptidase P, N-terminal domain BADSM9389_RS03710 PF00557 Metallopeptidase family M24 BADSM9389_RS03715 PF01494 FAD binding domain BADSM9389_RS03720 PF01494 FAD binding domain BADSM9389_RS03725 PF01571 Aminomethyltransferase folate-binding domain BADSM9389_RS03725 PF08669 Glycine cleavage T-protein C-terminal barrel domain BADSM9389_RS03730 PF01597 Glycine cleavage H-protein BADSM9389_RS03735 PF02347 Glycine cleavage system P-protein BADSM9389_RS03750 PF00174 Oxidoreductase molybdopterin binding domain BADSM9389_RS03755 PF01292 Prokaryotic cytochrome b561 BADSM9389_RS03760 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS03760 PF00072 Response regulator receiver domain BADSM9389_RS03765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS03765 PF18698 Histidine kinase sensor domain BADSM9389_RS03765 PF00672 HAMP domain BADSM9389_RS03765 PF00989 PAS fold BADSM9389_RS03765 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS03770 PF00232 Glycosyl hydrolase family 1 BADSM9389_RS03775 PF01380 SIS domain BADSM9389_RS03775 PF01418 Helix-turn-helix domain, rpiR family BADSM9389_RS03780 PF03006 Haemolysin-III related BADSM9389_RS03785 PF01571 Aminomethyltransferase folate-binding domain BADSM9389_RS03790 PF03937 Flavinator of succinate dehydrogenase BADSM9389_RS03795 PF07254 Membrane-bound toxin component of toxin-antitoxin system BADSM9389_RS03800 PF00258 Flavodoxin BADSM9389_RS03805 PF02899 Phage integrase, N-terminal SAM-like domain BADSM9389_RS03805 PF00589 Phage integrase family BADSM9389_RS03810 PF10411 Disulfide bond isomerase protein N-terminus BADSM9389_RS03810 PF13098 Thioredoxin-like domain BADSM9389_RS03815 PF01368 DHH family BADSM9389_RS03815 PF02272 DHHA1 domain BADSM9389_RS03815 PF17768 RecJ OB domain BADSM9389_RS03825 PF00152 tRNA synthetases class II (D, K and N) BADSM9389_RS03825 PF01336 OB-fold nucleic acid binding domain BADSM9389_RS03830 PF01551 Peptidase family M23 BADSM9389_RS03830 PF01476 LysM domain BADSM9389_RS03840 PF13356 Arm DNA-binding domain BADSM9389_RS03840 PF00589 Phage integrase family BADSM9389_RS03850 PF13460 NAD(P)H-binding BADSM9389_RS03850 PF11066 Protein of unknown function (DUF2867) BADSM9389_RS03855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS03855 PF03466 LysR substrate binding domain BADSM9389_RS03860 PF00248 Aldo/keto reductase family BADSM9389_RS03865 PF00248 Aldo/keto reductase family BADSM9389_RS03875 PF00296 Luciferase-like monooxygenase BADSM9389_RS03890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BADSM9389_RS03895 PF00296 Luciferase-like monooxygenase BADSM9389_RS03905 PF03466 LysR substrate binding domain BADSM9389_RS03905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS03910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BADSM9389_RS03915 PF07690 Major Facilitator Superfamily BADSM9389_RS03940 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS03940 PF00672 HAMP domain BADSM9389_RS03940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS03945 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS03945 PF00072 Response regulator receiver domain BADSM9389_RS03950 PF00248 Aldo/keto reductase family BADSM9389_RS03955 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BADSM9389_RS03965 PF12833 Helix-turn-helix domain BADSM9389_RS03970 PF11975 Family 4 glycosyl hydrolase C-terminal domain BADSM9389_RS03970 PF02056 Family 4 glycosyl hydrolase BADSM9389_RS03980 PF04193 PQ loop repeat BADSM9389_RS03985 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS03985 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BADSM9389_RS03990 PF01306 LacY proton/sugar symporter BADSM9389_RS03995 PF00251 Glycosyl hydrolases family 32 N-terminal domain BADSM9389_RS03995 PF08244 Glycosyl hydrolases family 32 C terminal BADSM9389_RS04005 PF00294 pfkB family carbohydrate kinase BADSM9389_RS04010 PF00563 EAL domain BADSM9389_RS04010 PF05231 MASE1 BADSM9389_RS04015 PF00563 EAL domain BADSM9389_RS04015 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS04015 PF03707 Bacterial signalling protein N terminal repeat BADSM9389_RS04020 PF02378 Phosphotransferase system, EIIC BADSM9389_RS04045 PF00664 ABC transporter transmembrane region BADSM9389_RS04045 PF00005 ABC transporter BADSM9389_RS04045 PF03412 Peptidase C39 family BADSM9389_RS04050 PF02321 Outer membrane efflux protein BADSM9389_RS04065 PF10442 FIST C domain BADSM9389_RS04065 PF08495 FIST N domain BADSM9389_RS04065 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS04065 PF00563 EAL domain BADSM9389_RS04085 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS04085 PF00563 EAL domain BADSM9389_RS04085 PF13188 PAS domain BADSM9389_RS04085 PF03707 Bacterial signalling protein N terminal repeat BADSM9389_RS04090 PF00563 EAL domain BADSM9389_RS04090 PF05231 MASE1 BADSM9389_RS04095 PF02743 Cache domain BADSM9389_RS04095 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BADSM9389_RS04095 PF00672 HAMP domain BADSM9389_RS04100 PF00072 Response regulator receiver domain BADSM9389_RS04100 PF01339 CheB methylesterase BADSM9389_RS04105 PF03705 CheR methyltransferase, all-alpha domain BADSM9389_RS04105 PF01739 CheR methyltransferase, SAM binding domain BADSM9389_RS04110 PF01584 CheW-like domain BADSM9389_RS04110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS04110 PF01627 Hpt domain BADSM9389_RS04110 PF00072 Response regulator receiver domain BADSM9389_RS04115 PF00072 Response regulator receiver domain BADSM9389_RS04120 PF00072 Response regulator receiver domain BADSM9389_RS04120 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS04135 PF13185 GAF domain BADSM9389_RS04135 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS04140 PF00108 Thiolase, N-terminal domain BADSM9389_RS04140 PF02803 Thiolase, C-terminal domain BADSM9389_RS04145 PF06178 Oligogalacturonate-specific porin protein (KdgM) BADSM9389_RS04150 PF14583 Oligogalacturonate lyase BADSM9389_RS04160 PF14583 Oligogalacturonate lyase BADSM9389_RS04170 PF00005 ABC transporter BADSM9389_RS04170 PF17912 MalK OB fold domain BADSM9389_RS04170 PF03459 TOBE domain BADSM9389_RS04175 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS04180 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS04190 PF01177 Asp/Glu/Hydantoin racemase BADSM9389_RS04195 PF07690 Major Facilitator Superfamily BADSM9389_RS04200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS04200 PF03466 LysR substrate binding domain BADSM9389_RS04205 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BADSM9389_RS04205 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BADSM9389_RS04210 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS04215 PF02378 Phosphotransferase system, EIIC BADSM9389_RS04220 PF00232 Glycosyl hydrolase family 1 BADSM9389_RS04225 PF07729 FCD domain BADSM9389_RS04225 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS04255 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS04265 PF01553 Acyltransferase BADSM9389_RS04265 PF00501 AMP-binding enzyme BADSM9389_RS04270 PF07690 Major Facilitator Superfamily BADSM9389_RS04275 PF00248 Aldo/keto reductase family BADSM9389_RS04280 PF06004 Bacterial protein of unknown function (DUF903) BADSM9389_RS04285 PF03741 Integral membrane protein TerC family BADSM9389_RS04290 PF02976 DNA mismatch repair enzyme MutH BADSM9389_RS04295 PF00293 NUDIX domain BADSM9389_RS04300 PF01590 GAF domain BADSM9389_RS04300 PF00391 PEP-utilising enzyme, mobile domain BADSM9389_RS04300 PF02896 PEP-utilising enzyme, TIM barrel domain BADSM9389_RS04300 PF05524 PEP-utilising enzyme, N-terminal BADSM9389_RS04305 PF01790 Prolipoprotein diacylglyceryl transferase BADSM9389_RS04310 PF00303 Thymidylate synthase BADSM9389_RS04315 PF07963 Prokaryotic N-terminal methylation motif BADSM9389_RS04320 PF07963 Prokaryotic N-terminal methylation motif BADSM9389_RS04330 PF07963 Prokaryotic N-terminal methylation motif BADSM9389_RS04330 PF12528 Type II secretion prepilin peptidase dependent protein C BADSM9389_RS04335 PF17946 RecC C-terminal domain BADSM9389_RS04340 PF00675 Insulinase (Peptidase family M16) BADSM9389_RS04340 PF05193 Peptidase M16 inactive domain BADSM9389_RS04340 PF16187 Middle or third domain of peptidase_M16 BADSM9389_RS04345 PF12705 PD-(D/E)XK nuclease superfamily BADSM9389_RS04345 PF00580 UvrD/REP helicase N-terminal domain BADSM9389_RS04345 PF13361 UvrD-like helicase C-terminal domain BADSM9389_RS04350 PF13538 UvrD-like helicase C-terminal domain BADSM9389_RS04355 PF00696 Amino acid kinase family BADSM9389_RS04355 PF00583 Acetyltransferase (GNAT) family BADSM9389_RS04360 PF01520 N-acetylmuramoyl-L-alanine amidase BADSM9389_RS04360 PF11741 AMIN domain BADSM9389_RS04380 PF06725 3D domain BADSM9389_RS04380 PF03562 MltA specific insert domain BADSM9389_RS04385 PF00899 ThiF family BADSM9389_RS04390 PF02657 Fe-S metabolism associated domain BADSM9389_RS04395 PF00266 Aminotransferase class-V BADSM9389_RS04400 PF06004 Bacterial protein of unknown function (DUF903) BADSM9389_RS04405 PF03466 LysR substrate binding domain BADSM9389_RS04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS04410 PF04241 Protein of unknown function (DUF423) BADSM9389_RS04415 PF18125 RlmM ferredoxin-like domain BADSM9389_RS04415 PF01728 FtsJ-like methyltransferase BADSM9389_RS04420 PF01367 5'-3' exonuclease, C-terminal SAM fold BADSM9389_RS04420 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BADSM9389_RS04425 PF00155 Aminotransferase class I and II BADSM9389_RS04430 PF03812 2-keto-3-deoxygluconate permease BADSM9389_RS04435 PF04962 KduI/IolB family BADSM9389_RS04440 PF03315 Serine dehydratase beta chain BADSM9389_RS04440 PF03313 Serine dehydratase alpha chain BADSM9389_RS04450 PF11892 Domain of unknown function (DUF3412) BADSM9389_RS04450 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BADSM9389_RS04450 PF03641 Possible lysine decarboxylase BADSM9389_RS04455 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BADSM9389_RS04455 PF14489 QueF-like protein BADSM9389_RS04460 PF07348 Syd protein (SUKH-2) BADSM9389_RS04465 PF04287 tRNA pseudouridine synthase C BADSM9389_RS04470 PF00849 RNA pseudouridylate synthase BADSM9389_RS04475 PF00258 Flavodoxin BADSM9389_RS04480 PF07690 Major Facilitator Superfamily BADSM9389_RS04485 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BADSM9389_RS04485 PF13378 Enolase C-terminal domain-like BADSM9389_RS04490 PF13378 Enolase C-terminal domain-like BADSM9389_RS04495 PF02595 Glycerate kinase family BADSM9389_RS04500 PF00672 HAMP domain BADSM9389_RS04500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS04500 PF01627 Hpt domain BADSM9389_RS04500 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS04500 PF00072 Response regulator receiver domain BADSM9389_RS04500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BADSM9389_RS04505 PF05958 tRNA (Uracil-5-)-methyltransferase BADSM9389_RS04505 PF01938 TRAM domain BADSM9389_RS04510 PF02824 TGS domain BADSM9389_RS04510 PF13291 ACT domain BADSM9389_RS04510 PF04607 Region found in RelA / SpoT proteins BADSM9389_RS04515 PF05638 Type VI secretion system effector, Hcp BADSM9389_RS04525 PF03819 MazG nucleotide pyrophosphohydrolase domain BADSM9389_RS04530 PF00117 Glutamine amidotransferase class-I BADSM9389_RS04530 PF06418 CTP synthase N-terminus BADSM9389_RS04535 PF00113 Enolase, C-terminal TIM barrel domain BADSM9389_RS04535 PF03952 Enolase, N-terminal domain BADSM9389_RS04540 PF08240 Alcohol dehydrogenase GroES-like domain BADSM9389_RS04540 PF00107 Zinc-binding dehydrogenase BADSM9389_RS04550 PF07670 Nucleoside recognition BADSM9389_RS04555 PF07670 Nucleoside recognition BADSM9389_RS04560 PF04055 Radical SAM superfamily BADSM9389_RS04565 PF01242 6-pyruvoyl tetrahydropterin synthase BADSM9389_RS04570 PF00175 Oxidoreductase NAD-binding domain BADSM9389_RS04570 PF00258 Flavodoxin BADSM9389_RS04570 PF00667 FAD binding domain BADSM9389_RS04575 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BADSM9389_RS04575 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BADSM9389_RS04580 PF01507 Phosphoadenosine phosphosulfate reductase family BADSM9389_RS04585 PF04389 Peptidase family M28 BADSM9389_RS04590 PF01507 Phosphoadenosine phosphosulfate reductase family BADSM9389_RS04595 PF00009 Elongation factor Tu GTP binding domain BADSM9389_RS04605 PF12084 Protein of unknown function (DUF3561) BADSM9389_RS04610 PF04977 Septum formation initiator BADSM9389_RS04615 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BADSM9389_RS04620 PF02542 YgbB family BADSM9389_RS04625 PF01142 tRNA pseudouridine synthase D (TruD) BADSM9389_RS04630 PF01975 Survival protein SurE BADSM9389_RS04640 PF01476 LysM domain BADSM9389_RS04640 PF01551 Peptidase family M23 BADSM9389_RS04645 PF04545 Sigma-70, region 4 BADSM9389_RS04645 PF00140 Sigma-70 factor, region 1.2 BADSM9389_RS04645 PF04542 Sigma-70 region 2 BADSM9389_RS04645 PF04539 Sigma-70 region 3 BADSM9389_RS04650 PF05190 MutS family domain IV BADSM9389_RS04650 PF05188 MutS domain II BADSM9389_RS04650 PF01624 MutS domain I BADSM9389_RS04650 PF05192 MutS domain III BADSM9389_RS04650 PF00488 MutS domain V BADSM9389_RS04655 PF13406 Transglycosylase SLT domain BADSM9389_RS04660 PF00571 CBS domain BADSM9389_RS04660 PF01380 SIS domain BADSM9389_RS04665 PF08220 DeoR-like helix-turn-helix domain BADSM9389_RS04665 PF00455 DeoR C terminal sensor domain BADSM9389_RS04670 PF06923 Glucitol operon activator protein (GutM) BADSM9389_RS04675 PF00106 short chain dehydrogenase BADSM9389_RS04680 PF03829 PTS system glucitol/sorbitol-specific IIA component BADSM9389_RS04685 PF07663 Sorbitol phosphotransferase enzyme II C-terminus BADSM9389_RS04685 PF03612 Sorbitol phosphotransferase enzyme II N-terminus BADSM9389_RS04690 PF03608 PTS system enzyme II sorbitol-specific factor BADSM9389_RS04695 PF00005 ABC transporter BADSM9389_RS04700 PF00950 ABC 3 transport family BADSM9389_RS04705 PF01297 Zinc-uptake complex component A periplasmic BADSM9389_RS04710 PF02464 Competence-damaged protein BADSM9389_RS04715 PF00154 recA bacterial DNA recombination protein BADSM9389_RS04720 PF02631 RecX family BADSM9389_RS04725 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BADSM9389_RS04725 PF01411 tRNA synthetases class II (A) BADSM9389_RS04725 PF02272 DHHA1 domain BADSM9389_RS04730 PF02599 Global regulator protein family BADSM9389_RS04760 PF13419 Haloacid dehalogenase-like hydrolase BADSM9389_RS04765 PF09335 SNARE associated Golgi protein BADSM9389_RS04770 PF04262 Glutamate-cysteine ligase BADSM9389_RS04775 PF02664 S-Ribosylhomocysteinase (LuxS) BADSM9389_RS04780 PF07690 Major Facilitator Superfamily BADSM9389_RS04785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS04785 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS04790 PF01047 MarR family BADSM9389_RS04795 PF05437 Branched-chain amino acid transport protein (AzlD) BADSM9389_RS04800 PF03591 AzlC protein BADSM9389_RS04805 PF07690 Major Facilitator Superfamily BADSM9389_RS04810 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BADSM9389_RS04815 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS04820 PF00005 ABC transporter BADSM9389_RS04820 PF00571 CBS domain BADSM9389_RS04825 PF00268 Ribonucleotide reductase, small chain BADSM9389_RS04830 PF08343 Ribonucleotide reductase N-terminal BADSM9389_RS04830 PF00317 Ribonucleotide reductase, all-alpha domain BADSM9389_RS04830 PF02867 Ribonucleotide reductase, barrel domain BADSM9389_RS04835 PF07972 NrdI Flavodoxin like BADSM9389_RS04840 PF00462 Glutaredoxin BADSM9389_RS04845 PF02627 Carboxymuconolactone decarboxylase family BADSM9389_RS04850 PF00155 Aminotransferase class I and II BADSM9389_RS04850 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS04855 PF05957 Bacterial protein of unknown function (DUF883) BADSM9389_RS04860 PF09400 Protein of unknown function (DUF2002) BADSM9389_RS04865 PF06610 L-alanine exporter BADSM9389_RS04875 PF11127 Protein of unknown function (DUF2892) BADSM9389_RS04875 PF00581 Rhodanese-like domain BADSM9389_RS04880 PF02773 S-adenosylmethionine synthetase, C-terminal domain BADSM9389_RS04880 PF00438 S-adenosylmethionine synthetase, N-terminal domain BADSM9389_RS04880 PF02772 S-adenosylmethionine synthetase, central domain BADSM9389_RS04895 PF04632 Fusaric acid resistance protein family BADSM9389_RS04905 PF00390 Malic enzyme, N-terminal domain BADSM9389_RS04905 PF03949 Malic enzyme, NAD binding domain BADSM9389_RS04920 PF13599 Pentapeptide repeats (9 copies) BADSM9389_RS04925 PF13693 Winged helix-turn-helix DNA-binding BADSM9389_RS04935 PF00576 HIUase/Transthyretin family BADSM9389_RS04945 PF13356 Arm DNA-binding domain BADSM9389_RS04945 PF00589 Phage integrase family BADSM9389_RS04955 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS04955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS04960 PF00664 ABC transporter transmembrane region BADSM9389_RS04960 PF00005 ABC transporter BADSM9389_RS04975 PF01668 SmpB protein BADSM9389_RS04980 PF03364 Polyketide cyclase / dehydrase and lipid transport BADSM9389_RS04985 PF03658 RnfH family Ubiquitin BADSM9389_RS04990 PF04355 SmpA / OmlA family BADSM9389_RS04995 PF02463 RecF/RecN/SMC N terminal domain BADSM9389_RS05000 PF01513 ATP-NAD kinase BADSM9389_RS05005 PF01025 GrpE BADSM9389_RS05010 PF03471 Transporter associated domain BADSM9389_RS05010 PF01595 Cyclin M transmembrane N-terminal domain BADSM9389_RS05010 PF00571 CBS domain BADSM9389_RS05015 PF01578 Cytochrome C assembly protein BADSM9389_RS05020 PF02978 Signal peptide binding domain BADSM9389_RS05020 PF02881 SRP54-type protein, helical bundle domain BADSM9389_RS05020 PF00448 SRP54-type protein, GTPase domain BADSM9389_RS05025 PF00886 Ribosomal protein S16 BADSM9389_RS05030 PF05239 PRC-barrel domain BADSM9389_RS05030 PF01782 RimM N-terminal domain BADSM9389_RS05035 PF01746 tRNA (Guanine-1)-methyltransferase BADSM9389_RS05040 PF01245 Ribosomal protein L19 BADSM9389_RS05045 PF10973 Protein of unknown function (DUF2799) BADSM9389_RS05050 PF00793 DAHP synthetase I family BADSM9389_RS05055 PF02153 Prephenate dehydrogenase BADSM9389_RS05055 PF01817 Chorismate mutase type II BADSM9389_RS05060 PF08450 SMP-30/Gluconolactonase/LRE-like region BADSM9389_RS05065 PF01817 Chorismate mutase type II BADSM9389_RS05065 PF00800 Prephenate dehydratase BADSM9389_RS05070 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BADSM9389_RS05075 PF13525 Outer membrane lipoprotein BADSM9389_RS05080 PF01479 S4 domain BADSM9389_RS05080 PF00849 RNA pseudouridylate synthase BADSM9389_RS05090 PF00004 ATPase family associated with various cellular activities (AAA) BADSM9389_RS05090 PF07724 AAA domain (Cdc48 subfamily) BADSM9389_RS05090 PF17871 AAA lid domain BADSM9389_RS05090 PF02861 Clp amino terminal domain, pathogenicity island component BADSM9389_RS05090 PF10431 C-terminal, D2-small domain, of ClpB protein BADSM9389_RS05120 PF00083 Sugar (and other) transporter BADSM9389_RS05125 PF10043 Predicted periplasmic lipoprotein (DUF2279) BADSM9389_RS05130 PF13091 PLD-like domain BADSM9389_RS05135 PF00583 Acetyltransferase (GNAT) family BADSM9389_RS05135 PF13380 CoA binding domain BADSM9389_RS05135 PF13607 Succinyl-CoA ligase like flavodoxin domain BADSM9389_RS05145 PF00085 Thioredoxin BADSM9389_RS05150 PF08032 RNA 2'-O ribose methyltransferase substrate binding BADSM9389_RS05150 PF00588 SpoU rRNA Methylase family BADSM9389_RS05155 PF03167 Uracil DNA glycosylase superfamily BADSM9389_RS05160 PF01228 Glycine radical BADSM9389_RS05165 PF00270 DEAD/DEAH box helicase BADSM9389_RS05165 PF00271 Helicase conserved C-terminal domain BADSM9389_RS05170 PF05175 Methyltransferase small domain BADSM9389_RS05175 PF00890 FAD binding domain BADSM9389_RS05175 PF02910 Fumarate reductase flavoprotein C-term BADSM9389_RS05185 PF08281 Sigma-70, region 4 BADSM9389_RS05185 PF04542 Sigma-70 region 2 BADSM9389_RS05190 PF03873 Anti sigma-E protein RseA, C-terminal domain BADSM9389_RS05190 PF03872 Anti sigma-E protein RseA, N-terminal domain BADSM9389_RS05195 PF17188 MucB/RseB C-terminal domain BADSM9389_RS05195 PF03888 MucB/RseB N-terminal domain BADSM9389_RS05205 PF00009 Elongation factor Tu GTP binding domain BADSM9389_RS05205 PF00679 Elongation factor G C-terminus BADSM9389_RS05205 PF06421 GTP-binding protein LepA C-terminus BADSM9389_RS05205 PF03144 Elongation factor Tu domain 2 BADSM9389_RS05210 PF10502 Signal peptidase, peptidase S26 BADSM9389_RS05215 PF00035 Double-stranded RNA binding motif BADSM9389_RS05215 PF14622 Ribonuclease-III-like BADSM9389_RS05220 PF07650 KH domain BADSM9389_RS05220 PF01926 50S ribosome-binding GTPase BADSM9389_RS05225 PF11967 Recombination protein O N terminal BADSM9389_RS05225 PF02565 Recombination protein O C terminal BADSM9389_RS05230 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BADSM9389_RS05235 PF01648 4'-phosphopantetheinyl transferase superfamily BADSM9389_RS05240 PF12838 4Fe-4S dicluster domain BADSM9389_RS05245 PF01380 SIS domain BADSM9389_RS05245 PF01418 Helix-turn-helix domain, rpiR family BADSM9389_RS05255 PF14437 MafB19-like deaminase BADSM9389_RS05260 PF01464 Transglycosylase SLT domain BADSM9389_RS05260 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS05265 PF02769 AIR synthase related protein, C-terminal domain BADSM9389_RS05265 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BADSM9389_RS05265 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BADSM9389_RS05270 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS05270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS05275 PF13942 YfhG lipoprotein BADSM9389_RS05280 PF00158 Sigma-54 interaction domain BADSM9389_RS05280 PF00072 Response regulator receiver domain BADSM9389_RS05285 PF00543 Nitrogen regulatory protein P-II BADSM9389_RS05290 PF00970 Oxidoreductase FAD-binding domain BADSM9389_RS05290 PF00042 Globin BADSM9389_RS05290 PF00175 Oxidoreductase NAD-binding domain BADSM9389_RS05295 PF00464 Serine hydroxymethyltransferase BADSM9389_RS05300 PF00480 ROK family BADSM9389_RS05305 PF13181 Tetratricopeptide repeat BADSM9389_RS05305 PF17128 Domain of unknown function (DUF5107) BADSM9389_RS05310 PF00083 Sugar (and other) transporter BADSM9389_RS05315 PF01263 Aldose 1-epimerase BADSM9389_RS05320 PF12832 MFS_1 like family BADSM9389_RS05325 PF00874 PRD domain BADSM9389_RS05330 PF06226 Protein of unknown function (DUF1007) BADSM9389_RS05335 PF03824 High-affinity nickel-transport protein BADSM9389_RS05340 PF00459 Inositol monophosphatase family BADSM9389_RS05345 PF00588 SpoU rRNA Methylase family BADSM9389_RS05350 PF02082 Transcriptional regulator BADSM9389_RS05355 PF00266 Aminotransferase class-V BADSM9389_RS05360 PF01592 NifU-like N terminal domain BADSM9389_RS05365 PF01521 Iron-sulphur cluster biosynthesis BADSM9389_RS05370 PF07743 HSCB C-terminal oligomerisation domain BADSM9389_RS05375 PF00012 Hsp70 protein BADSM9389_RS05380 PF00111 2Fe-2S iron-sulfur cluster binding domain BADSM9389_RS05385 PF04384 Iron-sulphur cluster assembly BADSM9389_RS05390 PF12404 Peptidase BADSM9389_RS05390 PF00883 Cytosol aminopeptidase family, catalytic domain BADSM9389_RS05395 PF14581 SseB protein C-terminal domain BADSM9389_RS05395 PF07179 SseB protein N-terminal domain BADSM9389_RS05400 PF01380 SIS domain BADSM9389_RS05400 PF01418 Helix-turn-helix domain, rpiR family BADSM9389_RS05405 PF00581 Rhodanese-like domain BADSM9389_RS05410 PF11975 Family 4 glycosyl hydrolase C-terminal domain BADSM9389_RS05410 PF02056 Family 4 glycosyl hydrolase BADSM9389_RS05415 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BADSM9389_RS05415 PF02378 Phosphotransferase system, EIIC BADSM9389_RS05415 PF00367 phosphotransferase system, EIIB BADSM9389_RS05420 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BADSM9389_RS05420 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BADSM9389_RS05420 PF07703 Alpha-2-macroglobulin bait region domain BADSM9389_RS05420 PF17962 Bacterial macroglobulin domain 6 BADSM9389_RS05420 PF01835 MG2 domain BADSM9389_RS05420 PF00207 Alpha-2-macroglobulin family BADSM9389_RS05420 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BADSM9389_RS05420 PF07678 A-macroglobulin TED domain BADSM9389_RS05420 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BADSM9389_RS05425 PF00912 Transglycosylase BADSM9389_RS05425 PF06832 Penicillin-Binding Protein C-terminus Family BADSM9389_RS05425 PF00905 Penicillin binding protein transpeptidase domain BADSM9389_RS05430 PF00334 Nucleoside diphosphate kinase BADSM9389_RS05435 PF04055 Radical SAM superfamily BADSM9389_RS05440 PF13464 Domain of unknown function (DUF4115) BADSM9389_RS05445 PF04551 GcpE protein BADSM9389_RS05450 PF03129 Anticodon binding domain BADSM9389_RS05450 PF13393 Histidyl-tRNA synthetase BADSM9389_RS05455 PF09976 Tetratricopeptide repeat-like domain BADSM9389_RS05460 PF13360 PQQ-like domain BADSM9389_RS05465 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BADSM9389_RS05465 PF01926 50S ribosome-binding GTPase BADSM9389_RS05475 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BADSM9389_RS05480 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BADSM9389_RS05485 PF07191 zinc-ribbons BADSM9389_RS05490 PF13742 OB-fold nucleic acid binding domain BADSM9389_RS05490 PF02601 Exonuclease VII, large subunit BADSM9389_RS05495 PF00478 IMP dehydrogenase / GMP reductase domain BADSM9389_RS05495 PF00571 CBS domain BADSM9389_RS05500 PF00117 Glutamine amidotransferase class-I BADSM9389_RS05500 PF00958 GMP synthase C terminal domain BADSM9389_RS05500 PF02540 NAD synthase BADSM9389_RS05505 PF02833 DHHA2 domain BADSM9389_RS05505 PF01368 DHH family BADSM9389_RS05510 PF11119 Protein of unknown function (DUF2633) BADSM9389_RS05515 PF00563 EAL domain BADSM9389_RS05515 PF05231 MASE1 BADSM9389_RS05520 PF02541 Ppx/GppA phosphatase family BADSM9389_RS05525 PF13089 Polyphosphate kinase N-terminal domain BADSM9389_RS05525 PF13090 Polyphosphate kinase C-terminal domain 2 BADSM9389_RS05525 PF17941 Polyphosphate kinase C-terminal domain 1 BADSM9389_RS05525 PF02503 Polyphosphate kinase middle domain BADSM9389_RS05530 PF00551 Formyl transferase BADSM9389_RS05535 PF00586 AIR synthase related protein, N-terminal domain BADSM9389_RS05535 PF02769 AIR synthase related protein, C-terminal domain BADSM9389_RS05545 PF00860 Permease family BADSM9389_RS05550 PF00308 Bacterial dnaA protein BADSM9389_RS05555 PF03960 ArsC family BADSM9389_RS05560 PF01435 Peptidase family M48 BADSM9389_RS05565 PF01594 AI-2E family transporter BADSM9389_RS05570 PF00578 AhpC/TSA family BADSM9389_RS05575 PF01842 ACT domain BADSM9389_RS05580 PF00701 Dihydrodipicolinate synthetase family BADSM9389_RS05585 PF06804 NlpB/DapX lipoprotein BADSM9389_RS05590 PF01259 SAICAR synthetase BADSM9389_RS05595 PF04228 Putative neutral zinc metallopeptidase BADSM9389_RS05600 PF05127 Helicase BADSM9389_RS05600 PF17176 tRNA-binding domain BADSM9389_RS05600 PF13718 GNAT acetyltransferase 2 BADSM9389_RS05600 PF08351 Domain of unknown function (DUF1726) BADSM9389_RS05605 PF02230 Phospholipase/Carboxylesterase BADSM9389_RS05610 PF13980 Uncharacterised protein family (UPF0370) BADSM9389_RS05615 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS05615 PF07687 Peptidase dimerisation domain BADSM9389_RS05620 PF03960 ArsC family BADSM9389_RS05630 PF00873 AcrB/AcrD/AcrF family BADSM9389_RS05635 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS05635 PF00072 Response regulator receiver domain BADSM9389_RS05640 PF07730 Histidine kinase BADSM9389_RS05640 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BADSM9389_RS05640 PF00672 HAMP domain BADSM9389_RS05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS05645 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS05645 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BADSM9389_RS05645 PF13247 4Fe-4S dicluster domain BADSM9389_RS05650 PF13187 4Fe-4S dicluster domain BADSM9389_RS05650 PF00037 4Fe-4S binding domain BADSM9389_RS05650 PF12800 4Fe-4S binding domain BADSM9389_RS05655 PF03927 NapD protein BADSM9389_RS05660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BADSM9389_RS05660 PF01568 Molydopterin dinucleotide binding domain BADSM9389_RS05660 PF00384 Molybdopterin oxidoreductase BADSM9389_RS05665 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BADSM9389_RS05670 PF03264 NapC/NirT cytochrome c family, N-terminal region BADSM9389_RS05675 PF00293 NUDIX domain BADSM9389_RS05680 PF06674 Protein of unknown function (DUF1176) BADSM9389_RS05685 PF00456 Transketolase, thiamine diphosphate binding domain BADSM9389_RS05685 PF02779 Transketolase, pyrimidine binding domain BADSM9389_RS05685 PF02780 Transketolase, C-terminal domain BADSM9389_RS05690 PF00923 Transaldolase/Fructose-6-phosphate aldolase BADSM9389_RS05695 PF03949 Malic enzyme, NAD binding domain BADSM9389_RS05695 PF00390 Malic enzyme, N-terminal domain BADSM9389_RS05695 PF01515 Phosphate acetyl/butaryl transferase BADSM9389_RS05700 PF01218 Coproporphyrinogen III oxidase BADSM9389_RS05705 PF01520 N-acetylmuramoyl-L-alanine amidase BADSM9389_RS05710 PF00583 Acetyltransferase (GNAT) family BADSM9389_RS05715 PF11143 Protein of unknown function (DUF2919) BADSM9389_RS05720 PF06572 Protein of unknown function (DUF1131) BADSM9389_RS05725 PF04261 Dyp-type peroxidase family BADSM9389_RS05735 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS05740 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS05745 PF00005 ABC transporter BADSM9389_RS05750 PF00291 Pyridoxal-phosphate dependent enzyme BADSM9389_RS05755 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BADSM9389_RS05760 PF02896 PEP-utilising enzyme, TIM barrel domain BADSM9389_RS05760 PF05524 PEP-utilising enzyme, N-terminal BADSM9389_RS05760 PF00391 PEP-utilising enzyme, mobile domain BADSM9389_RS05765 PF00381 PTS HPr component phosphorylation site BADSM9389_RS05770 PF00291 Pyridoxal-phosphate dependent enzyme BADSM9389_RS05780 PF04354 ZipA, C-terminal FtsZ-binding domain BADSM9389_RS05785 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BADSM9389_RS05785 PF12826 Helix-hairpin-helix motif BADSM9389_RS05785 PF01653 NAD-dependent DNA ligase adenylation domain BADSM9389_RS05785 PF00533 BRCA1 C Terminus (BRCT) domain BADSM9389_RS05785 PF03120 NAD-dependent DNA ligase OB-fold domain BADSM9389_RS05790 PF12843 Putative quorum-sensing-regulated virulence factor BADSM9389_RS05795 PF13593 SBF-like CPA transporter family (DUF4137) BADSM9389_RS05800 PF03466 LysR substrate binding domain BADSM9389_RS05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS05830 PF00749 tRNA synthetases class I (E and Q), catalytic domain BADSM9389_RS05835 PF07037 Putative transcription regulator (DUF1323) BADSM9389_RS05850 PF05231 MASE1 BADSM9389_RS05850 PF00563 EAL domain BADSM9389_RS05855 PF17151 Periplasmic sensor domain BADSM9389_RS05855 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS05860 PF07670 Nucleoside recognition BADSM9389_RS05860 PF01773 Na+ dependent nucleoside transporter N-terminus BADSM9389_RS05860 PF07662 Na+ dependent nucleoside transporter C-terminus BADSM9389_RS05865 PF01566 Natural resistance-associated macrophage protein BADSM9389_RS05870 PF10697 Protein of unknown function (DUF2502) BADSM9389_RS05875 PF00248 Aldo/keto reductase family BADSM9389_RS05880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BADSM9389_RS05880 PF00205 Thiamine pyrophosphate enzyme, central domain BADSM9389_RS05880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BADSM9389_RS05885 PF00654 Voltage gated chloride channel BADSM9389_RS05890 PF02685 Glucokinase BADSM9389_RS05895 PF00072 Response regulator receiver domain BADSM9389_RS05895 PF04397 LytTr DNA-binding domain BADSM9389_RS05900 PF06580 Histidine kinase BADSM9389_RS05900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS05900 PF07694 5TMR of 5TMR-LYT BADSM9389_RS05905 PF07350 Protein of unknown function (DUF1479) BADSM9389_RS05910 PF00155 Aminotransferase class I and II BADSM9389_RS05925 PF13977 BetI-type transcriptional repressor, C-terminal BADSM9389_RS05925 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS05930 PF07690 Major Facilitator Superfamily BADSM9389_RS05935 PF03746 LamB/YcsF family BADSM9389_RS05975 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BADSM9389_RS06020 PF01226 Formate/nitrite transporter BADSM9389_RS06025 PF00005 ABC transporter BADSM9389_RS06030 PF03379 CcmB protein BADSM9389_RS06035 PF01578 Cytochrome C assembly protein BADSM9389_RS06040 PF04995 Heme exporter protein D (CcmD) BADSM9389_RS06045 PF03100 CcmE BADSM9389_RS06050 PF01578 Cytochrome C assembly protein BADSM9389_RS06050 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BADSM9389_RS06055 PF08534 Redoxin BADSM9389_RS06060 PF03918 Cytochrome C biogenesis protein BADSM9389_RS06065 PF04333 MlaA lipoprotein BADSM9389_RS06070 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BADSM9389_RS06075 PF04175 Protein of unknown function (DUF406) BADSM9389_RS06080 PF00108 Thiolase, N-terminal domain BADSM9389_RS06080 PF02803 Thiolase, C-terminal domain BADSM9389_RS06085 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BADSM9389_RS06085 PF00378 Enoyl-CoA hydratase/isomerase BADSM9389_RS06085 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BADSM9389_RS06090 PF00300 Histidine phosphatase superfamily (branch 1) BADSM9389_RS06095 PF01713 Smr domain BADSM9389_RS06100 PF05175 Methyltransferase small domain BADSM9389_RS06105 PF01264 Chorismate synthase BADSM9389_RS06110 PF03411 Penicillin-insensitive murein endopeptidase BADSM9389_RS06115 PF01925 Sulfite exporter TauE/SafE BADSM9389_RS06120 PF04315 Elongation factor P hydroxylase BADSM9389_RS06125 PF08891 YfcL protein BADSM9389_RS06130 PF01266 FAD dependent oxidoreductase BADSM9389_RS06130 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BADSM9389_RS06135 PF00109 Beta-ketoacyl synthase, N-terminal domain BADSM9389_RS06135 PF02801 Beta-ketoacyl synthase, C-terminal domain BADSM9389_RS06140 PF07690 Major Facilitator Superfamily BADSM9389_RS06150 PF11890 Domain of unknown function (DUF3410) BADSM9389_RS06150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BADSM9389_RS06150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BADSM9389_RS06155 PF01118 Semialdehyde dehydrogenase, NAD binding domain BADSM9389_RS06155 PF02774 Semialdehyde dehydrogenase, dimerisation domain BADSM9389_RS06160 PF01416 tRNA pseudouridine synthase BADSM9389_RS06165 PF09335 SNARE associated Golgi protein BADSM9389_RS06170 PF17848 Acetyl-coA carboxylase zinc finger domain BADSM9389_RS06170 PF01039 Carboxyl transferase domain BADSM9389_RS06175 PF02875 Mur ligase family, glutamate ligase domain BADSM9389_RS06175 PF08245 Mur ligase middle domain BADSM9389_RS06180 PF05036 Sporulation related domain BADSM9389_RS06185 PF02674 Colicin V production protein BADSM9389_RS06190 PF00156 Phosphoribosyl transferase domain BADSM9389_RS06195 PF02441 Flavoprotein BADSM9389_RS06200 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS06205 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS06210 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS06215 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS06220 PF00005 ABC transporter BADSM9389_RS06225 PF08338 Domain of unknown function (DUF1731) BADSM9389_RS06225 PF01370 NAD dependent epimerase/dehydratase family BADSM9389_RS06230 PF02152 Dihydroneopterin aldolase BADSM9389_RS06235 PF02798 Glutathione S-transferase, N-terminal domain BADSM9389_RS06235 PF00043 Glutathione S-transferase, C-terminal domain BADSM9389_RS06240 PF02798 Glutathione S-transferase, N-terminal domain BADSM9389_RS06240 PF14834 Glutathione S-transferase, C-terminal domain BADSM9389_RS06245 PF12850 Calcineurin-like phosphoesterase superfamily domain BADSM9389_RS06250 PF00293 NUDIX domain BADSM9389_RS06255 PF01515 Phosphate acetyl/butaryl transferase BADSM9389_RS06255 PF07085 DRTGG domain BADSM9389_RS06260 PF00871 Acetokinase family BADSM9389_RS06265 PF04217 Protein of unknown function, DUF412 BADSM9389_RS06270 PF03887 YfbU domain BADSM9389_RS06275 PF13419 Haloacid dehalogenase-like hydrolase BADSM9389_RS06280 PF02080 TrkA-C domain BADSM9389_RS06280 PF03600 Citrate transporter BADSM9389_RS06290 PF00155 Aminotransferase class I and II BADSM9389_RS06295 PF03466 LysR substrate binding domain BADSM9389_RS06295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS06300 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BADSM9389_RS06305 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BADSM9389_RS06310 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BADSM9389_RS06310 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BADSM9389_RS06320 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BADSM9389_RS06320 PF10531 SLBB domain BADSM9389_RS06320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BADSM9389_RS06325 PF00384 Molybdopterin oxidoreductase BADSM9389_RS06325 PF01568 Molydopterin dinucleotide binding domain BADSM9389_RS06325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BADSM9389_RS06325 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BADSM9389_RS06330 PF00146 NADH dehydrogenase BADSM9389_RS06335 PF12838 4Fe-4S dicluster domain BADSM9389_RS06340 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BADSM9389_RS06345 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BADSM9389_RS06350 PF00361 Proton-conducting membrane transporter BADSM9389_RS06350 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BADSM9389_RS06355 PF00361 Proton-conducting membrane transporter BADSM9389_RS06360 PF00361 Proton-conducting membrane transporter BADSM9389_RS06365 PF03441 FAD binding domain of DNA photolyase BADSM9389_RS06365 PF00875 DNA photolyase BADSM9389_RS06370 PF01784 NIF3 (NGG1p interacting factor 3) BADSM9389_RS06375 PF02682 Carboxyltransferase domain, subdomain C and D BADSM9389_RS06380 PF02626 Carboxyltransferase domain, subdomain A and B BADSM9389_RS06385 PF06827 Zinc finger found in FPG and IleRS BADSM9389_RS06385 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BADSM9389_RS06385 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BADSM9389_RS06395 PF00285 Citrate synthase, C-terminal domain BADSM9389_RS06400 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BADSM9389_RS06405 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BADSM9389_RS06410 PF02910 Fumarate reductase flavoprotein C-term BADSM9389_RS06410 PF00890 FAD binding domain BADSM9389_RS06415 PF13085 2Fe-2S iron-sulfur cluster binding domain BADSM9389_RS06420 PF02779 Transketolase, pyrimidine binding domain BADSM9389_RS06420 PF16870 2-oxoglutarate dehydrogenase C-terminal BADSM9389_RS06420 PF00676 Dehydrogenase E1 component BADSM9389_RS06420 PF16078 2-oxoglutarate dehydrogenase N-terminus BADSM9389_RS06425 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BADSM9389_RS06425 PF02817 e3 binding domain BADSM9389_RS06425 PF00364 Biotin-requiring enzyme BADSM9389_RS06430 PF08442 ATP-grasp domain BADSM9389_RS06430 PF00549 CoA-ligase BADSM9389_RS06435 PF02629 CoA binding domain BADSM9389_RS06435 PF00549 CoA-ligase BADSM9389_RS06450 PF04717 Type VI secretion system, phage-baseplate injector BADSM9389_RS06455 PF07702 UTRA domain BADSM9389_RS06455 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS06460 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS06460 PF02378 Phosphotransferase system, EIIC BADSM9389_RS06460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS06465 PF01074 Glycosyl hydrolases family 38 N-terminal domain BADSM9389_RS06465 PF07748 Glycosyl hydrolases family 38 C-terminal domain BADSM9389_RS06465 PF09261 Alpha mannosidase middle domain BADSM9389_RS06470 PF01654 Cytochrome bd terminal oxidase subunit I BADSM9389_RS06475 PF02322 Cytochrome bd terminal oxidase subunit II BADSM9389_RS06480 PF08173 Membrane bound YbgT-like protein BADSM9389_RS06485 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) BADSM9389_RS06490 PF03061 Thioesterase superfamily BADSM9389_RS06495 PF01618 MotA/TolQ/ExbB proton channel family BADSM9389_RS06500 PF02472 Biopolymer transport protein ExbD/TolR BADSM9389_RS06505 PF06519 TolA C-terminal BADSM9389_RS06510 PF07676 WD40-like Beta Propeller Repeat BADSM9389_RS06510 PF04052 TolB amino-terminal domain BADSM9389_RS06515 PF00691 OmpA family BADSM9389_RS06520 PF13174 Tetratricopeptide repeat BADSM9389_RS06520 PF16331 TolA binding protein trimerisation BADSM9389_RS06565 PF02445 Quinolinate synthetase A protein BADSM9389_RS06570 PF04973 Nicotinamide mononucleotide transporter BADSM9389_RS06575 PF01545 Cation efflux family BADSM9389_RS06580 PF13985 YbgS-like protein BADSM9389_RS06585 PF00793 DAHP synthetase I family BADSM9389_RS06590 PF00300 Histidine phosphatase superfamily (branch 1) BADSM9389_RS06595 PF01263 Aldose 1-epimerase BADSM9389_RS06600 PF10509 Galactokinase galactose-binding signature BADSM9389_RS06600 PF08544 GHMP kinases C terminal BADSM9389_RS06600 PF00288 GHMP kinases N terminal domain BADSM9389_RS06605 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BADSM9389_RS06605 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BADSM9389_RS06610 PF16363 GDP-mannose 4,6 dehydratase BADSM9389_RS06615 PF00005 ABC transporter BADSM9389_RS06620 PF03459 TOBE domain BADSM9389_RS06620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS06625 PF10766 Multidrug efflux pump-associated protein AcrZ BADSM9389_RS06630 PF04286 Protein of unknown function (DUF445) BADSM9389_RS06635 PF00717 Peptidase S24-like BADSM9389_RS06640 PF00817 impB/mucB/samB family BADSM9389_RS06640 PF11799 impB/mucB/samB family C-terminal domain BADSM9389_RS06640 PF11798 IMS family HHH motif BADSM9389_RS06640 PF13438 Domain of unknown function (DUF4113) BADSM9389_RS06645 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS06645 PF03707 Bacterial signalling protein N terminal repeat BADSM9389_RS06645 PF00563 EAL domain BADSM9389_RS06655 PF11893 Domain of unknown function (DUF3413) BADSM9389_RS06655 PF00884 Sulfatase BADSM9389_RS06660 PF07208 Protein of unknown function (DUF1414) BADSM9389_RS06665 PF04245 37-kD nucleoid-associated bacterial protein BADSM9389_RS06670 PF01386 Ribosomal L25p family BADSM9389_RS06675 PF04851 Type III restriction enzyme, res subunit BADSM9389_RS06675 PF00271 Helicase conserved C-terminal domain BADSM9389_RS06680 PF01479 S4 domain BADSM9389_RS06680 PF00849 RNA pseudouridylate synthase BADSM9389_RS06685 PF07690 Major Facilitator Superfamily BADSM9389_RS06690 PF13989 YejG-like protein BADSM9389_RS06695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS06695 PF00005 ABC transporter BADSM9389_RS06700 PF12911 N-terminal TM domain of oligopeptide transport permease C BADSM9389_RS06700 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS06705 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS06710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS06715 PF12792 CSS motif domain associated with EAL BADSM9389_RS06715 PF00563 EAL domain BADSM9389_RS06720 PF00877 NlpC/P60 family BADSM9389_RS06725 PF01569 PAP2 superfamily BADSM9389_RS06730 PF02492 CobW/HypB/UreG, nucleotide-binding domain BADSM9389_RS06730 PF07683 Cobalamin synthesis protein cobW C-terminal domain BADSM9389_RS06735 PF01232 Mannitol dehydrogenase Rossmann domain BADSM9389_RS06735 PF08125 Mannitol dehydrogenase C-terminal domain BADSM9389_RS06740 PF03786 D-mannonate dehydratase (UxuA) BADSM9389_RS06750 PF01037 Lrp/AsnC ligand binding domain BADSM9389_RS06755 PF09285 Elongation factor P, C-terminal BADSM9389_RS06755 PF01132 Elongation factor P (EF-P) OB domain BADSM9389_RS06755 PF08207 Elongation factor P (EF-P) KOW-like domain BADSM9389_RS06760 PF03692 Putative zinc- or iron-chelating domain BADSM9389_RS06765 PF07690 Major Facilitator Superfamily BADSM9389_RS06770 PF00381 PTS HPr component phosphorylation site BADSM9389_RS06770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS06775 PF00294 pfkB family carbohydrate kinase BADSM9389_RS06780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS06780 PF02378 Phosphotransferase system, EIIC BADSM9389_RS06785 PF01261 Xylose isomerase-like TIM barrel BADSM9389_RS06790 PF03601 Conserved hypothetical protein 698 BADSM9389_RS06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS06795 PF03466 LysR substrate binding domain BADSM9389_RS06800 PF06291 Bor protein BADSM9389_RS06810 PF00324 Amino acid permease BADSM9389_RS06815 PF00593 TonB dependent receptor BADSM9389_RS06815 PF07715 TonB-dependent Receptor Plug Domain BADSM9389_RS06820 PF00756 Putative esterase BADSM9389_RS06825 PF06779 Uncharacterised MFS-type transporter YbfB BADSM9389_RS06830 PF01227 GTP cyclohydrolase I BADSM9389_RS06835 PF04235 Protein of unknown function (DUF418) BADSM9389_RS06840 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS06845 PF13407 Periplasmic binding protein domain BADSM9389_RS06850 PF00005 ABC transporter BADSM9389_RS06855 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS06860 PF02698 DUF218 domain BADSM9389_RS06865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BADSM9389_RS06865 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BADSM9389_RS06870 PF04172 LrgB-like family BADSM9389_RS06875 PF03788 LrgA family BADSM9389_RS06880 PF17969 L,D-transpeptidase C-terminal domain BADSM9389_RS06880 PF03734 L,D-transpeptidase catalytic domain BADSM9389_RS06885 PF12848 ABC transporter BADSM9389_RS06885 PF00005 ABC transporter BADSM9389_RS06890 PF17137 Domain of unknown function (DUF5110) BADSM9389_RS06890 PF16338 Domain of unknown function (DUF4968) BADSM9389_RS06890 PF01055 Glycosyl hydrolases family 31 BADSM9389_RS06890 PF13802 Galactose mutarotase-like BADSM9389_RS06895 PF07690 Major Facilitator Superfamily BADSM9389_RS06900 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS06905 PF00899 ThiF family BADSM9389_RS06910 PF00994 Probable molybdopterin binding domain BADSM9389_RS06910 PF03454 MoeA C-terminal region (domain IV) BADSM9389_RS06910 PF03453 MoeA N-terminal region (domain I and II) BADSM9389_RS06915 PF01112 Asparaginase BADSM9389_RS06920 PF00005 ABC transporter BADSM9389_RS06920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS06925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS06930 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS06935 PF12911 N-terminal TM domain of oligopeptide transport permease C BADSM9389_RS06935 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS06940 PF00919 Uncharacterized protein family UPF0004 BADSM9389_RS06940 PF18693 TRAM domain BADSM9389_RS06940 PF04055 Radical SAM superfamily BADSM9389_RS06950 PF00144 Beta-lactamase BADSM9389_RS06955 PF10799 Biofilm formation protein (YliH/bssR) BADSM9389_RS06960 PF07995 Glucose / Sorbosone dehydrogenase BADSM9389_RS06965 PF00043 Glutathione S-transferase, C-terminal domain BADSM9389_RS06965 PF13417 Glutathione S-transferase, N-terminal domain BADSM9389_RS06970 PF07943 Penicillin-binding protein 5, C-terminal domain BADSM9389_RS06970 PF00768 D-alanyl-D-alanine carboxypeptidase BADSM9389_RS06975 PF00455 DeoR C terminal sensor domain BADSM9389_RS06975 PF08220 DeoR-like helix-turn-helix domain BADSM9389_RS06980 PF01569 PAP2 superfamily BADSM9389_RS06985 PF07690 Major Facilitator Superfamily BADSM9389_RS06990 PF09334 tRNA synthetases class I (M) BADSM9389_RS06990 PF01588 Putative tRNA binding domain BADSM9389_RS06995 PF10609 NUBPL iron-transfer P-loop NTPase BADSM9389_RS07000 PF07694 5TMR of 5TMR-LYT BADSM9389_RS07000 PF06580 Histidine kinase BADSM9389_RS07005 PF00072 Response regulator receiver domain BADSM9389_RS07005 PF04397 LytTr DNA-binding domain BADSM9389_RS07010 PF07308 Protein of unknown function (DUF1456) BADSM9389_RS07015 PF02625 XdhC and CoxI family BADSM9389_RS07015 PF13478 XdhC Rossmann domain BADSM9389_RS07025 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BADSM9389_RS07025 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BADSM9389_RS07025 PF00034 Cytochrome c BADSM9389_RS07030 PF01799 [2Fe-2S] binding domain BADSM9389_RS07030 PF00111 2Fe-2S iron-sulfur cluster binding domain BADSM9389_RS07035 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BADSM9389_RS07035 PF00034 Cytochrome c BADSM9389_RS07035 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BADSM9389_RS07040 PF13722 5TM C-terminal transporter carbon starvation CstA BADSM9389_RS07040 PF02554 Carbon starvation protein CstA BADSM9389_RS07050 PF12795 Mechanosensitive ion channel porin domain BADSM9389_RS07050 PF00924 Mechanosensitive ion channel BADSM9389_RS07050 PF12794 Mechanosensitive ion channel inner membrane domain 1 BADSM9389_RS07055 PF00419 Fimbrial protein BADSM9389_RS07065 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS07065 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS07070 PF13954 PapC N-terminal domain BADSM9389_RS07070 PF00577 Outer membrane usher protein BADSM9389_RS07070 PF13953 PapC C-terminal domain BADSM9389_RS07075 PF00419 Fimbrial protein BADSM9389_RS07080 PF00419 Fimbrial protein BADSM9389_RS07085 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS07085 PF00072 Response regulator receiver domain BADSM9389_RS07095 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS07100 PF00563 EAL domain BADSM9389_RS07100 PF05231 MASE1 BADSM9389_RS07230 PF02110 Hydroxyethylthiazole kinase family BADSM9389_RS07235 PF08543 Phosphomethylpyrimidine kinase BADSM9389_RS07240 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS07240 PF07702 UTRA domain BADSM9389_RS07245 PF00294 pfkB family carbohydrate kinase BADSM9389_RS07250 PF03747 ADP-ribosylglycohydrolase BADSM9389_RS07255 PF03825 Nucleoside H+ symporter BADSM9389_RS07260 PF01791 DeoC/LacD family aldolase BADSM9389_RS07265 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BADSM9389_RS07265 PF13378 Enolase C-terminal domain-like BADSM9389_RS07270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS07275 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS07285 PF00005 ABC transporter BADSM9389_RS07285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS07290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS07290 PF00005 ABC transporter BADSM9389_RS07300 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS07300 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS07305 PF00577 Outer membrane usher protein BADSM9389_RS07305 PF13954 PapC N-terminal domain BADSM9389_RS07305 PF13953 PapC C-terminal domain BADSM9389_RS07315 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS07315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS07330 PF00781 Diacylglycerol kinase catalytic domain BADSM9389_RS07340 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS07340 PF00072 Response regulator receiver domain BADSM9389_RS07345 PF00672 HAMP domain BADSM9389_RS07345 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS07345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS07350 PF07690 Major Facilitator Superfamily BADSM9389_RS07355 PF00873 AcrB/AcrD/AcrF family BADSM9389_RS07360 PF00873 AcrB/AcrD/AcrF family BADSM9389_RS07365 PF13533 Biotin-lipoyl like BADSM9389_RS07380 PF00012 Hsp70 protein BADSM9389_RS07385 PF06029 AlkA N-terminal domain BADSM9389_RS07385 PF00730 HhH-GPD superfamily base excision DNA repair protein BADSM9389_RS07390 PF13426 PAS domain BADSM9389_RS07390 PF00563 EAL domain BADSM9389_RS07390 PF08447 PAS fold BADSM9389_RS07390 PF05231 MASE1 BADSM9389_RS07390 PF08448 PAS fold BADSM9389_RS07390 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS07395 PF00485 Phosphoribulokinase / Uridine kinase family BADSM9389_RS07400 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) BADSM9389_RS07405 PF05170 AsmA family BADSM9389_RS07410 PF00571 CBS domain BADSM9389_RS07410 PF03471 Transporter associated domain BADSM9389_RS07410 PF03741 Integral membrane protein TerC family BADSM9389_RS07415 PF02563 Polysaccharide biosynthesis/export protein BADSM9389_RS07415 PF10531 SLBB domain BADSM9389_RS07415 PF18412 Outer-membrane lipoprotein Wza C-terminal domain BADSM9389_RS07420 PF01451 Low molecular weight phosphotyrosine protein phosphatase BADSM9389_RS07425 PF13614 AAA domain BADSM9389_RS07425 PF13807 G-rich domain on putative tyrosine kinase BADSM9389_RS07425 PF02706 Chain length determinant protein BADSM9389_RS07430 PF00535 Glycosyl transferase family 2 BADSM9389_RS07435 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS07440 PF00534 Glycosyl transferases group 1 BADSM9389_RS07440 PF13439 Glycosyltransferase Family 4 BADSM9389_RS07450 PF00535 Glycosyl transferase family 2 BADSM9389_RS07455 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS07460 PF16363 GDP-mannose 4,6 dehydratase BADSM9389_RS07465 PF01370 NAD dependent epimerase/dehydratase family BADSM9389_RS07470 PF00293 NUDIX domain BADSM9389_RS07475 PF00534 Glycosyl transferases group 1 BADSM9389_RS07475 PF13579 Glycosyl transferase 4-like domain BADSM9389_RS07480 PF00483 Nucleotidyl transferase BADSM9389_RS07480 PF01050 Mannose-6-phosphate isomerase BADSM9389_RS07485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BADSM9389_RS07485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BADSM9389_RS07485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BADSM9389_RS07485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BADSM9389_RS07490 PF02397 Bacterial sugar transferase BADSM9389_RS07500 PF04230 Polysaccharide pyruvyl transferase BADSM9389_RS07505 PF13439 Glycosyltransferase Family 4 BADSM9389_RS07505 PF00534 Glycosyl transferases group 1 BADSM9389_RS07515 PF00483 Nucleotidyl transferase BADSM9389_RS07520 PF01943 Polysaccharide biosynthesis protein BADSM9389_RS07525 PF00535 Glycosyl transferase family 2 BADSM9389_RS07530 PF11380 Stealth protein CR2, conserved region 2 BADSM9389_RS07530 PF17103 Stealth protein CR4, conserved region 4 BADSM9389_RS07530 PF17101 Stealth protein CR1, conserved region 1 BADSM9389_RS07545 PF16363 GDP-mannose 4,6 dehydratase BADSM9389_RS07550 PF01370 NAD dependent epimerase/dehydratase family BADSM9389_RS07555 PF00293 NUDIX domain BADSM9389_RS07560 PF01050 Mannose-6-phosphate isomerase BADSM9389_RS07560 PF00483 Nucleotidyl transferase BADSM9389_RS07565 PF00535 Glycosyl transferase family 2 BADSM9389_RS07570 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BADSM9389_RS07570 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BADSM9389_RS07570 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BADSM9389_RS07570 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BADSM9389_RS07575 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BADSM9389_RS07575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BADSM9389_RS07580 PF16363 GDP-mannose 4,6 dehydratase BADSM9389_RS07585 PF00483 Nucleotidyl transferase BADSM9389_RS07590 PF02706 Chain length determinant protein BADSM9389_RS07595 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BADSM9389_RS07595 PF01502 Phosphoribosyl-AMP cyclohydrolase BADSM9389_RS07600 PF00977 Histidine biosynthesis protein BADSM9389_RS07605 PF00977 Histidine biosynthesis protein BADSM9389_RS07610 PF00117 Glutamine amidotransferase class-I BADSM9389_RS07615 PF00475 Imidazoleglycerol-phosphate dehydratase BADSM9389_RS07615 PF08645 Polynucleotide kinase 3 phosphatase BADSM9389_RS07620 PF00155 Aminotransferase class I and II BADSM9389_RS07625 PF00815 Histidinol dehydrogenase BADSM9389_RS07630 PF01634 ATP phosphoribosyltransferase BADSM9389_RS07630 PF08029 HisG, C-terminal domain BADSM9389_RS07640 PF01370 NAD dependent epimerase/dehydratase family BADSM9389_RS07645 PF03466 LysR substrate binding domain BADSM9389_RS07645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS07650 PF00202 Aminotransferase class-III BADSM9389_RS07660 PF13520 Amino acid permease BADSM9389_RS07665 PF08411 Exonuclease C-terminal BADSM9389_RS07665 PF00929 Exonuclease BADSM9389_RS07670 PF00768 D-alanyl-D-alanine carboxypeptidase BADSM9389_RS07670 PF07943 Penicillin-binding protein 5, C-terminal domain BADSM9389_RS07675 PF06445 GyrI-like small molecule binding domain BADSM9389_RS07680 PF04632 Fusaric acid resistance protein family BADSM9389_RS07685 PF04363 Protein of unknown function (DUF496) BADSM9389_RS07690 PF00288 GHMP kinases N terminal domain BADSM9389_RS07695 PF07685 CobB/CobQ-like glutamine amidotransferase domain BADSM9389_RS07695 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BADSM9389_RS07700 PF03186 CobD/Cbib protein BADSM9389_RS07705 PF02570 Precorrin-8X methylmutase BADSM9389_RS07710 PF01888 CbiD BADSM9389_RS07715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BADSM9389_RS07720 PF05175 Methyltransferase small domain BADSM9389_RS07725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BADSM9389_RS07730 PF11760 Cobalamin synthesis G N-terminal BADSM9389_RS07730 PF01890 Cobalamin synthesis G C-terminus BADSM9389_RS07730 PF11761 Cobalamin biosynthesis central region BADSM9389_RS07735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BADSM9389_RS07740 PF02571 Precorrin-6x reductase CbiJ/CobK BADSM9389_RS07745 PF06180 Cobalt chelatase (CbiK) BADSM9389_RS07750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BADSM9389_RS07755 PF01891 Cobalt uptake substrate-specific transmembrane region BADSM9389_RS07760 PF02553 Cobalt transport protein component CbiN BADSM9389_RS07765 PF02361 Cobalt transport protein BADSM9389_RS07770 PF00005 ABC transporter BADSM9389_RS07775 PF07685 CobB/CobQ-like glutamine amidotransferase domain BADSM9389_RS07780 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BADSM9389_RS07785 PF02654 Cobalamin-5-phosphate synthase BADSM9389_RS07790 PF02277 Phosphoribosyltransferase BADSM9389_RS07795 PF00107 Zinc-binding dehydrogenase BADSM9389_RS07795 PF08240 Alcohol dehydrogenase GroES-like domain BADSM9389_RS07800 PF09084 NMT1/THI5 like BADSM9389_RS07805 PF00005 ABC transporter BADSM9389_RS07810 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS07830 PF13188 PAS domain BADSM9389_RS07830 PF03707 Bacterial signalling protein N terminal repeat BADSM9389_RS07830 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS07830 PF00563 EAL domain BADSM9389_RS07835 PF00302 Chloramphenicol acetyltransferase BADSM9389_RS07840 PF00255 Glutathione peroxidase BADSM9389_RS07845 PF00849 RNA pseudouridylate synthase BADSM9389_RS07855 PF13458 Periplasmic binding protein BADSM9389_RS07860 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS07865 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS07865 PF11862 Domain of unknown function (DUF3382) BADSM9389_RS07870 PF00005 ABC transporter BADSM9389_RS07870 PF12399 Branched-chain amino acid ATP-binding cassette transporter BADSM9389_RS07875 PF00005 ABC transporter BADSM9389_RS07880 PF01554 MatE BADSM9389_RS07885 PF03806 AbgT putative transporter family BADSM9389_RS07890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS07890 PF03466 LysR substrate binding domain BADSM9389_RS07895 PF08240 Alcohol dehydrogenase GroES-like domain BADSM9389_RS07895 PF00107 Zinc-binding dehydrogenase BADSM9389_RS07900 PF00881 Nitroreductase family BADSM9389_RS07905 PF03992 Antibiotic biosynthesis monooxygenase BADSM9389_RS07910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS07910 PF03466 LysR substrate binding domain BADSM9389_RS07915 PF07690 Major Facilitator Superfamily BADSM9389_RS07925 PF00005 ABC transporter BADSM9389_RS07935 PF13416 Bacterial extracellular solute-binding protein BADSM9389_RS07945 PF00557 Metallopeptidase family M24 BADSM9389_RS07945 PF01321 Creatinase/Prolidase N-terminal domain BADSM9389_RS07950 PF01048 Phosphorylase superfamily BADSM9389_RS07950 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus BADSM9389_RS07970 PF13309 HTH domain BADSM9389_RS07970 PF08348 YheO-like PAS domain BADSM9389_RS07975 PF02423 Ornithine cyclodeaminase/mu-crystallin family BADSM9389_RS07980 PF00291 Pyridoxal-phosphate dependent enzyme BADSM9389_RS07980 PF13291 ACT domain BADSM9389_RS07985 PF14001 YdfZ protein BADSM9389_RS07990 PF08267 Cobalamin-independent synthase, N-terminal domain BADSM9389_RS07990 PF01717 Cobalamin-independent synthase, Catalytic domain BADSM9389_RS08010 PF11412 Disulphide bond corrector protein DsbC BADSM9389_RS08010 PF02683 Cytochrome C biogenesis protein transmembrane region BADSM9389_RS08020 PF00578 AhpC/TSA family BADSM9389_RS08025 PF03466 LysR substrate binding domain BADSM9389_RS08025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS08030 PF03466 LysR substrate binding domain BADSM9389_RS08030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS08035 PF03734 L,D-transpeptidase catalytic domain BADSM9389_RS08035 PF17969 L,D-transpeptidase C-terminal domain BADSM9389_RS08045 PF06167 Glucose-regulated metallo-peptidase M90 BADSM9389_RS08050 PF00267 Gram-negative porin BADSM9389_RS08060 PF01966 HD domain BADSM9389_RS08065 PF18284 DNA methylase N-terminal domain BADSM9389_RS08065 PF00145 C-5 cytosine-specific DNA methylase BADSM9389_RS08075 PF03852 DNA mismatch endonuclease Vsr BADSM9389_RS08080 PF00892 EamA-like transporter family BADSM9389_RS08085 PF05661 Protein of unknown function (DUF808) BADSM9389_RS08090 PF09926 Uncharacterized small protein (DUF2158) BADSM9389_RS08095 PF17151 Periplasmic sensor domain BADSM9389_RS08095 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS08105 PF10733 Protein of unknown function (DUF2525) BADSM9389_RS08110 PF10781 Dextransucrase DSRB BADSM9389_RS08115 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS08120 PF01311 Bacterial export proteins, family 1 BADSM9389_RS08125 PF01313 Bacterial export proteins, family 3 BADSM9389_RS08130 PF00813 FliP family BADSM9389_RS08135 PF04347 Flagellar biosynthesis protein, FliO BADSM9389_RS08140 PF16973 Flagellar motor switch protein FliN N-terminal BADSM9389_RS08140 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BADSM9389_RS08145 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BADSM9389_RS08145 PF02154 Flagellar motor switch protein FliM BADSM9389_RS08150 PF03748 Flagellar basal body-associated protein FliL BADSM9389_RS08155 PF02120 Flagellar hook-length control protein FliK BADSM9389_RS08160 PF02050 Flagellar FliJ protein BADSM9389_RS08165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BADSM9389_RS08165 PF18269 T3SS EscN ATPase C-terminal domain BADSM9389_RS08170 PF02108 Flagellar assembly protein FliH BADSM9389_RS08175 PF01706 FliG C-terminal domain BADSM9389_RS08175 PF14841 FliG middle domain BADSM9389_RS08175 PF14842 FliG N-terminal domain BADSM9389_RS08180 PF08345 Flagellar M-ring protein C-terminal BADSM9389_RS08180 PF01514 Secretory protein of YscJ/FliF family BADSM9389_RS08185 PF02049 Flagellar hook-basal body complex protein FliE BADSM9389_RS08190 PF13987 YedD-like protein BADSM9389_RS08195 PF00128 Alpha amylase, catalytic domain BADSM9389_RS08195 PF02806 Alpha amylase, C-terminal all-beta domain BADSM9389_RS08200 PF05400 Flagellar protein FliT BADSM9389_RS08205 PF02561 Flagellar protein FliS BADSM9389_RS08210 PF07196 Flagellin hook IN motif BADSM9389_RS08210 PF07195 Flagellar hook-associated protein 2 C-terminus BADSM9389_RS08210 PF02465 Flagellar hook-associated protein 2 N-terminus BADSM9389_RS08215 PF00700 Bacterial flagellin C-terminal helical region BADSM9389_RS08215 PF00669 Bacterial flagellin N-terminal helical region BADSM9389_RS08215 PF12445 Flagellin protein BADSM9389_RS08220 PF04542 Sigma-70 region 2 BADSM9389_RS08220 PF04545 Sigma-70, region 4 BADSM9389_RS08220 PF04539 Sigma-70 region 3 BADSM9389_RS08225 PF02899 Phage integrase, N-terminal SAM-like domain BADSM9389_RS08235 PF00291 Pyridoxal-phosphate dependent enzyme BADSM9389_RS08250 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS08250 PF03472 Autoinducer binding domain BADSM9389_RS08255 PF10769 Protein of unknown function (DUF2594) BADSM9389_RS08260 PF00072 Response regulator receiver domain BADSM9389_RS08260 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS08265 PF01541 GIY-YIG catalytic domain BADSM9389_RS08265 PF02151 UvrB/uvrC motif BADSM9389_RS08265 PF08459 UvrC Helix-hairpin-helix N-terminal BADSM9389_RS08270 PF01066 CDP-alcohol phosphatidyltransferase BADSM9389_RS08290 PF01380 SIS domain BADSM9389_RS08295 PF00367 phosphotransferase system, EIIB BADSM9389_RS08295 PF02378 Phosphotransferase system, EIIC BADSM9389_RS08300 PF03695 Uncharacterised protein family (UPF0149) BADSM9389_RS08300 PF02810 SEC-C motif BADSM9389_RS08305 PF02397 Bacterial sugar transferase BADSM9389_RS08315 PF02563 Polysaccharide biosynthesis/export protein BADSM9389_RS08345 PF00534 Glycosyl transferases group 1 BADSM9389_RS08345 PF13439 Glycosyltransferase Family 4 BADSM9389_RS08360 PF16363 GDP-mannose 4,6 dehydratase BADSM9389_RS08370 PF00210 Ferritin-like domain BADSM9389_RS08380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BADSM9389_RS08380 PF00672 HAMP domain BADSM9389_RS08380 PF02203 Tar ligand binding domain homologue BADSM9389_RS08390 PF07690 Major Facilitator Superfamily BADSM9389_RS08400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS08405 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS08410 PF12911 N-terminal TM domain of oligopeptide transport permease C BADSM9389_RS08410 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS08415 PF00005 ABC transporter BADSM9389_RS08415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS08420 PF00005 ABC transporter BADSM9389_RS08420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS08435 PF10964 Protein of unknown function (DUF2766) BADSM9389_RS08440 PF03605 Anaerobic c4-dicarboxylate membrane transporter BADSM9389_RS08445 PF05426 Alginate lyase BADSM9389_RS08445 PF07940 Heparinase II/III-like protein BADSM9389_RS08455 PF01547 Bacterial extracellular solute-binding protein BADSM9389_RS08460 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS08465 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS08470 PF03459 TOBE domain BADSM9389_RS08470 PF17912 MalK OB fold domain BADSM9389_RS08470 PF00005 ABC transporter BADSM9389_RS08480 PF00210 Ferritin-like domain BADSM9389_RS08485 PF12852 Cupin BADSM9389_RS08485 PF12833 Helix-turn-helix domain BADSM9389_RS08495 PF01306 LacY proton/sugar symporter BADSM9389_RS08500 PF07470 Glycosyl Hydrolase Family 88 BADSM9389_RS08510 PF05638 Type VI secretion system effector, Hcp BADSM9389_RS08530 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BADSM9389_RS08535 PF00005 ABC transporter BADSM9389_RS08540 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS08545 PF02358 Trehalose-phosphatase BADSM9389_RS08550 PF00982 Glycosyltransferase family 20 BADSM9389_RS08555 PF00582 Universal stress protein family BADSM9389_RS08560 PF05247 Flagellar transcriptional activator (FlhD) BADSM9389_RS08565 PF05280 Flagellar transcriptional activator (FlhC) BADSM9389_RS08570 PF01618 MotA/TolQ/ExbB proton channel family BADSM9389_RS08575 PF13677 Membrane MotB of proton-channel complex MotA/MotB BADSM9389_RS08575 PF00691 OmpA family BADSM9389_RS08580 PF09078 CheY binding BADSM9389_RS08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS08580 PF01627 Hpt domain BADSM9389_RS08580 PF01584 CheW-like domain BADSM9389_RS08580 PF02895 Signal transducing histidine kinase, homodimeric domain BADSM9389_RS08585 PF01584 CheW-like domain BADSM9389_RS08590 PF00375 Sodium:dicarboxylate symporter family BADSM9389_RS08620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BADSM9389_RS08620 PF02203 Tar ligand binding domain homologue BADSM9389_RS08620 PF00672 HAMP domain BADSM9389_RS08625 PF00672 HAMP domain BADSM9389_RS08625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BADSM9389_RS08625 PF02203 Tar ligand binding domain homologue BADSM9389_RS08630 PF01739 CheR methyltransferase, SAM binding domain BADSM9389_RS08630 PF03705 CheR methyltransferase, all-alpha domain BADSM9389_RS08635 PF01339 CheB methylesterase BADSM9389_RS08635 PF00072 Response regulator receiver domain BADSM9389_RS08640 PF00072 Response regulator receiver domain BADSM9389_RS08645 PF04344 Chemotaxis phosphatase, CheZ BADSM9389_RS08660 PF03797 Autotransporter beta-domain BADSM9389_RS08670 PF01312 FlhB HrpN YscU SpaS Family BADSM9389_RS08675 PF00771 FHIPEP family BADSM9389_RS08680 PF06366 Flagellar protein FlhE BADSM9389_RS08690 PF07470 Glycosyl Hydrolase Family 88 BADSM9389_RS08695 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BADSM9389_RS08695 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS08700 PF00750 tRNA synthetases class I (R) BADSM9389_RS08700 PF05746 DALR anticodon binding domain BADSM9389_RS08700 PF03485 Arginyl tRNA synthetase N terminal domain BADSM9389_RS08705 PF06185 YecM protein BADSM9389_RS08710 PF00155 Aminotransferase class I and II BADSM9389_RS08715 PF03932 CutC family BADSM9389_RS08720 PF10965 Protein of unknown function (DUF2767) BADSM9389_RS08725 PF08003 Protein of unknown function (DUF1698) BADSM9389_RS08730 PF13649 Methyltransferase domain BADSM9389_RS08735 PF01124 MAPEG family BADSM9389_RS08740 PF01904 Protein of unknown function DUF72 BADSM9389_RS08745 PF00857 Isochorismatase family BADSM9389_RS08750 PF01336 OB-fold nucleic acid binding domain BADSM9389_RS08750 PF00152 tRNA synthetases class II (D, K and N) BADSM9389_RS08750 PF02938 GAD domain BADSM9389_RS08755 PF00293 NUDIX domain BADSM9389_RS08760 PF01709 Transcriptional regulator BADSM9389_RS08765 PF02075 Crossover junction endodeoxyribonuclease RuvC BADSM9389_RS08770 PF01330 RuvA N terminal domain BADSM9389_RS08770 PF07499 RuvA, C-terminal domain BADSM9389_RS08775 PF05496 Holliday junction DNA helicase RuvB P-loop domain BADSM9389_RS08775 PF05491 RuvB C-terminal winged helix domain BADSM9389_RS08775 PF17864 RuvB AAA lid domain BADSM9389_RS08780 PF00950 ABC 3 transport family BADSM9389_RS08785 PF00005 ABC transporter BADSM9389_RS08790 PF01297 Zinc-uptake complex component A periplasmic BADSM9389_RS08795 PF08525 Opacity-associated protein A N-terminal motif BADSM9389_RS08795 PF01551 Peptidase family M23 BADSM9389_RS08795 PF01476 LysM domain BADSM9389_RS08800 PF03279 Bacterial lipid A biosynthesis acyltransferase BADSM9389_RS08805 PF00224 Pyruvate kinase, barrel domain BADSM9389_RS08805 PF02887 Pyruvate kinase, alpha/beta domain BADSM9389_RS08810 PF01418 Helix-turn-helix domain, rpiR family BADSM9389_RS08810 PF01380 SIS domain BADSM9389_RS08815 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BADSM9389_RS08815 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BADSM9389_RS08820 PF00920 Dehydratase family BADSM9389_RS08825 PF01081 KDPG and KHG aldolase BADSM9389_RS08830 PF02222 ATP-grasp domain BADSM9389_RS08835 PF07130 YebG protein BADSM9389_RS08840 PF04391 Protein of unknown function (DUF533) BADSM9389_RS08845 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BADSM9389_RS08845 PF00326 Prolyl oligopeptidase family BADSM9389_RS08850 PF00929 Exonuclease BADSM9389_RS08855 PF02540 NAD synthase BADSM9389_RS08855 PF00795 Carbon-nitrogen hydrolase BADSM9389_RS08860 PF06440 DNA polymerase III, theta subunit BADSM9389_RS08865 PF04234 CopC domain BADSM9389_RS08870 PF05425 Copper resistance protein D BADSM9389_RS08875 PF10709 Protein of unknown function (DUF2511) BADSM9389_RS08885 PF01740 STAS domain BADSM9389_RS08885 PF00916 Sulfate permease family BADSM9389_RS08890 PF00583 Acetyltransferase (GNAT) family BADSM9389_RS08895 PF00149 Calcineurin-like phosphoesterase BADSM9389_RS08900 PF07358 Protein of unknown function (DUF1482) BADSM9389_RS08905 PF07351 Protein of unknown function (DUF1480) BADSM9389_RS08910 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF BADSM9389_RS08910 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF BADSM9389_RS08910 PF01189 16S rRNA methyltransferase RsmB/F BADSM9389_RS08915 PF02470 MlaD protein BADSM9389_RS08920 PF04403 Paraquat-inducible protein A BADSM9389_RS08925 PF13185 GAF domain BADSM9389_RS08930 PF17516 ProQ C-terminal domain BADSM9389_RS08930 PF04352 ProQ/FINO family BADSM9389_RS08935 PF00595 PDZ domain BADSM9389_RS08935 PF11818 C-terminal domain of tail specific protease (DUF3340) BADSM9389_RS08935 PF17804 Tail specific protease N-terminal domain BADSM9389_RS08935 PF03572 Peptidase family S41 BADSM9389_RS08940 PF01435 Peptidase family M48 BADSM9389_RS08945 PF07690 Major Facilitator Superfamily BADSM9389_RS08950 PF09339 IclR helix-turn-helix domain BADSM9389_RS08950 PF01614 Bacterial transcriptional regulator BADSM9389_RS08955 PF13996 YobH-like protein BADSM9389_RS08960 PF13998 MgrB protein BADSM9389_RS08965 PF13974 YebO-like protein BADSM9389_RS08970 PF10736 Protein of unknown function (DUF2627) BADSM9389_RS08975 PF00313 'Cold-shock' DNA-binding domain BADSM9389_RS08980 PF03717 Penicillin-binding Protein dimerisation domain BADSM9389_RS08980 PF00905 Penicillin binding protein transpeptidase domain BADSM9389_RS08985 PF13847 Methyltransferase domain BADSM9389_RS08990 PF02659 Putative manganese efflux pump BADSM9389_RS08995 PF06173 Protein of unknown function (DUF986) BADSM9389_RS09000 PF03613 PTS system mannose/fructose/sorbose family IID component BADSM9389_RS09005 PF03609 PTS system sorbose-specific iic component BADSM9389_RS09010 PF03610 PTS system fructose IIA component BADSM9389_RS09010 PF03830 PTS system sorbose subfamily IIB component BADSM9389_RS09015 PF03471 Transporter associated domain BADSM9389_RS09015 PF03741 Integral membrane protein TerC family BADSM9389_RS09020 PF12792 CSS motif domain associated with EAL BADSM9389_RS09020 PF00563 EAL domain BADSM9389_RS09025 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS09025 PF07687 Peptidase dimerisation domain BADSM9389_RS09030 PF07690 Major Facilitator Superfamily BADSM9389_RS09035 PF03466 LysR substrate binding domain BADSM9389_RS09035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS09040 PF03313 Serine dehydratase alpha chain BADSM9389_RS09040 PF03315 Serine dehydratase beta chain BADSM9389_RS09045 PF00293 NUDIX domain BADSM9389_RS09050 PF04715 Anthranilate synthase component I, N terminal region BADSM9389_RS09050 PF00425 chorismate binding enzyme BADSM9389_RS09055 PF03701 Uncharacterised protein family (UPF0181) BADSM9389_RS09060 PF01042 Endoribonuclease L-PSP BADSM9389_RS09065 PF13307 Helicase C-terminal domain BADSM9389_RS09065 PF04851 Type III restriction enzyme, res subunit BADSM9389_RS09070 PF00814 Glycoprotease family BADSM9389_RS09075 PF03843 Outer membrane lipoprotein Slp family BADSM9389_RS09080 PF00501 AMP-binding enzyme BADSM9389_RS09080 PF13193 AMP-binding enzyme C-terminal domain BADSM9389_RS09085 PF00570 HRDC domain BADSM9389_RS09085 PF01612 3'-5' exonuclease BADSM9389_RS09090 PF03776 Septum formation topological specificity factor MinE BADSM9389_RS09095 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BADSM9389_RS09100 PF05209 Septum formation inhibitor MinC, N-terminal domain BADSM9389_RS09100 PF03775 Septum formation inhibitor MinC, C-terminal domain BADSM9389_RS09105 PF05166 YcgL domain BADSM9389_RS09110 PF13406 Transglycosylase SLT domain BADSM9389_RS09115 PF01557 Fumarylacetoacetate (FAA) hydrolase family BADSM9389_RS09120 PF03692 Putative zinc- or iron-chelating domain BADSM9389_RS09125 PF17156 Gammaproteobacterial periplasmic sensor domain BADSM9389_RS09125 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS09130 PF03891 Domain of unknown function (DUF333) BADSM9389_RS09135 PF02600 Disulfide bond formation protein DsbB BADSM9389_RS09140 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BADSM9389_RS09145 PF07840 FadR C-terminal domain BADSM9389_RS09145 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS09150 PF04293 SpoVR like protein BADSM9389_RS09160 PF01266 FAD dependent oxidoreductase BADSM9389_RS09165 PF01168 Alanine racemase, N-terminal domain BADSM9389_RS09165 PF00842 Alanine racemase, C-terminal domain BADSM9389_RS09170 PF02080 TrkA-C domain BADSM9389_RS09170 PF00999 Sodium/hydrogen exchanger family BADSM9389_RS09170 PF03471 Transporter associated domain BADSM9389_RS09175 PF17676 LD-carboxypeptidase C-terminal domain BADSM9389_RS09175 PF02016 LD-carboxypeptidase N-terminal domain BADSM9389_RS09180 PF01464 Transglycosylase SLT domain BADSM9389_RS09185 PF07238 PilZ domain BADSM9389_RS09185 PF07317 Flagellar regulator YcgR BADSM9389_RS09190 PF04226 Transglycosylase associated protein BADSM9389_RS09195 PF01204 Trehalase BADSM9389_RS09205 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS09210 PF02929 Beta galactosidase small chain BADSM9389_RS09210 PF16353 Domain of unknown function(DUF4981) BADSM9389_RS09210 PF00703 Glycosyl hydrolases family 2 BADSM9389_RS09210 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BADSM9389_RS09210 PF02837 Glycosyl hydrolases family 2, sugar binding domain BADSM9389_RS09215 PF04074 YhcH/YjgK/YiaL BADSM9389_RS09220 PF13520 Amino acid permease BADSM9389_RS09225 PF07715 TonB-dependent Receptor Plug Domain BADSM9389_RS09225 PF00593 TonB dependent receptor BADSM9389_RS09230 PF01204 Trehalase BADSM9389_RS09235 PF02311 AraC-like ligand binding domain BADSM9389_RS09235 PF12833 Helix-turn-helix domain BADSM9389_RS09240 PF00474 Sodium:solute symporter family BADSM9389_RS09245 PF00884 Sulfatase BADSM9389_RS09245 PF16347 Domain of unknown function (DUF4976) BADSM9389_RS09250 PF02656 Domain of unknown function (DUF202) BADSM9389_RS09255 PF02656 Domain of unknown function (DUF202) BADSM9389_RS09260 PF04055 Radical SAM superfamily BADSM9389_RS09260 PF13186 Iron-sulfur cluster-binding domain BADSM9389_RS09265 PF00069 Protein kinase domain BADSM9389_RS09280 PF00571 CBS domain BADSM9389_RS09280 PF01380 SIS domain BADSM9389_RS09285 PF00929 Exonuclease BADSM9389_RS09290 PF00701 Dihydrodipicolinate synthetase family BADSM9389_RS09295 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment BADSM9389_RS09310 PF00419 Fimbrial protein BADSM9389_RS09315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS09315 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS09320 PF00577 Outer membrane usher protein BADSM9389_RS09320 PF13954 PapC N-terminal domain BADSM9389_RS09320 PF13953 PapC C-terminal domain BADSM9389_RS09335 PF00155 Aminotransferase class I and II BADSM9389_RS09335 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS09340 PF00202 Aminotransferase class-III BADSM9389_RS09345 PF00171 Aldehyde dehydrogenase family BADSM9389_RS09350 PF13520 Amino acid permease BADSM9389_RS09365 PF00171 Aldehyde dehydrogenase family BADSM9389_RS09380 PF00034 Cytochrome c BADSM9389_RS09380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BADSM9389_RS09385 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS09385 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS09390 PF00419 Fimbrial protein BADSM9389_RS09395 PF00419 Fimbrial protein BADSM9389_RS09400 PF00419 Fimbrial protein BADSM9389_RS09405 PF00577 Outer membrane usher protein BADSM9389_RS09405 PF13953 PapC C-terminal domain BADSM9389_RS09405 PF13954 PapC N-terminal domain BADSM9389_RS09410 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS09410 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS09415 PF00419 Fimbrial protein BADSM9389_RS09430 PF03466 LysR substrate binding domain BADSM9389_RS09430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS09440 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BADSM9389_RS09440 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BADSM9389_RS09445 PF03450 CO dehydrogenase flavoprotein C-terminal domain BADSM9389_RS09445 PF00941 FAD binding domain in molybdopterin dehydrogenase BADSM9389_RS09450 PF00111 2Fe-2S iron-sulfur cluster binding domain BADSM9389_RS09450 PF01799 [2Fe-2S] binding domain BADSM9389_RS09460 PF00593 TonB dependent receptor BADSM9389_RS09460 PF07715 TonB-dependent Receptor Plug Domain BADSM9389_RS09470 PF00892 EamA-like transporter family BADSM9389_RS09475 PF08019 Phosphoethanolamine transferase EptA/EptB BADSM9389_RS09475 PF00884 Sulfatase BADSM9389_RS09480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BADSM9389_RS09485 PF00535 Glycosyl transferase family 2 BADSM9389_RS09490 PF00551 Formyl transferase BADSM9389_RS09490 PF02911 Formyl transferase, C-terminal domain BADSM9389_RS09490 PF01370 NAD dependent epimerase/dehydratase family BADSM9389_RS09495 PF01522 Polysaccharide deacetylase BADSM9389_RS09500 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BADSM9389_RS09505 PF00892 EamA-like transporter family BADSM9389_RS09510 PF00892 EamA-like transporter family BADSM9389_RS09515 PF00854 POT family BADSM9389_RS09520 PF03960 ArsC family BADSM9389_RS09525 PF02040 Arsenical pump membrane protein BADSM9389_RS09530 PF01022 Bacterial regulatory protein, arsR family BADSM9389_RS09535 PF03358 NADPH-dependent FMN reductase BADSM9389_RS09540 PF05974 Domain of unknown function (DUF892) BADSM9389_RS09550 PF10798 Biofilm development protein YmgB/AriR BADSM9389_RS09560 PF10798 Biofilm development protein YmgB/AriR BADSM9389_RS09565 PF04940 Sensors of blue-light using FAD BADSM9389_RS09565 PF00563 EAL domain BADSM9389_RS09570 PF13411 MerR HTH family regulatory protein BADSM9389_RS09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS09575 PF03466 LysR substrate binding domain BADSM9389_RS09580 PF04632 Fusaric acid resistance protein family BADSM9389_RS09585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BADSM9389_RS09590 PF03466 LysR substrate binding domain BADSM9389_RS09590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS09600 PF15977 Winged helix-turn-helix DNA binding BADSM9389_RS09605 PF15977 Winged helix-turn-helix DNA binding BADSM9389_RS09615 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS09615 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS09620 PF00577 Outer membrane usher protein BADSM9389_RS09620 PF13953 PapC C-terminal domain BADSM9389_RS09620 PF13954 PapC N-terminal domain BADSM9389_RS09650 PF01554 MatE BADSM9389_RS09655 PF00677 Lumazine binding domain BADSM9389_RS09660 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS09665 PF00232 Glycosyl hydrolase family 1 BADSM9389_RS09670 PF02378 Phosphotransferase system, EIIC BADSM9389_RS09680 PF07690 Major Facilitator Superfamily BADSM9389_RS09685 PF03466 LysR substrate binding domain BADSM9389_RS09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS09690 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS09700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BADSM9389_RS09700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BADSM9389_RS09705 PF00877 NlpC/P60 family BADSM9389_RS09710 PF00462 Glutaredoxin BADSM9389_RS09715 PF00929 Exonuclease BADSM9389_RS09720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BADSM9389_RS09725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BADSM9389_RS09730 PF16925 Tetracyclin repressor-like, C-terminal domain BADSM9389_RS09730 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS09740 PF06945 Protein of unknown function (DUF1289) BADSM9389_RS09745 PF00248 Aldo/keto reductase family BADSM9389_RS09750 PF00080 Copper/zinc superoxide dismutase (SODC) BADSM9389_RS09755 PF04632 Fusaric acid resistance protein family BADSM9389_RS09760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS09760 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS09765 PF07869 Protein of unknown function (DUF1656) BADSM9389_RS09770 PF01047 MarR family BADSM9389_RS09775 PF05433 Glycine zipper 2TM domain BADSM9389_RS09780 PF03702 Anhydro-N-acetylmuramic acid kinase BADSM9389_RS09785 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme BADSM9389_RS09790 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BADSM9389_RS09790 PF01243 Pyridoxamine 5'-phosphate oxidase BADSM9389_RS09795 PF00579 tRNA synthetases class I (W and Y) BADSM9389_RS09795 PF01479 S4 domain BADSM9389_RS09800 PF08543 Phosphomethylpyrimidine kinase BADSM9389_RS09805 PF02798 Glutathione S-transferase, N-terminal domain BADSM9389_RS09805 PF00043 Glutathione S-transferase, C-terminal domain BADSM9389_RS09810 PF00854 POT family BADSM9389_RS09815 PF00633 Helix-hairpin-helix motif BADSM9389_RS09815 PF10576 Iron-sulfur binding domain of endonuclease III BADSM9389_RS09815 PF00730 HhH-GPD superfamily base excision DNA repair protein BADSM9389_RS09820 PF02508 Rnf-Nqr subunit, membrane protein BADSM9389_RS09825 PF04205 FMN-binding domain BADSM9389_RS09830 PF03116 NQR2, RnfD, RnfE family BADSM9389_RS09835 PF13375 RnfC Barrel sandwich hybrid domain BADSM9389_RS09835 PF12838 4Fe-4S dicluster domain BADSM9389_RS09835 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BADSM9389_RS09835 PF10531 SLBB domain BADSM9389_RS09840 PF04060 Putative Fe-S cluster BADSM9389_RS09845 PF02508 Rnf-Nqr subunit, membrane protein BADSM9389_RS09850 PF10754 Protein of unknown function (DUF2569) BADSM9389_RS09855 PF05321 Haemolysin expression modulating protein BADSM9389_RS09860 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BADSM9389_RS09860 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BADSM9389_RS09865 PF13302 Acetyltransferase (GNAT) domain BADSM9389_RS09870 PF06932 Protein of unknown function (DUF1283) BADSM9389_RS09875 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BADSM9389_RS09880 PF13378 Enolase C-terminal domain-like BADSM9389_RS09880 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BADSM9389_RS09885 PF00107 Zinc-binding dehydrogenase BADSM9389_RS09885 PF08240 Alcohol dehydrogenase GroES-like domain BADSM9389_RS09890 PF00083 Sugar (and other) transporter BADSM9389_RS09890 PF07690 Major Facilitator Superfamily BADSM9389_RS09895 PF01232 Mannitol dehydrogenase Rossmann domain BADSM9389_RS09895 PF08125 Mannitol dehydrogenase C-terminal domain BADSM9389_RS09900 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS09900 PF07729 FCD domain BADSM9389_RS09905 PF00106 short chain dehydrogenase BADSM9389_RS09910 PF01979 Amidohydrolase family BADSM9389_RS09915 PF01799 [2Fe-2S] binding domain BADSM9389_RS09915 PF00111 2Fe-2S iron-sulfur cluster binding domain BADSM9389_RS09915 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BADSM9389_RS09915 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BADSM9389_RS09920 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BADSM9389_RS09920 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BADSM9389_RS09930 PF01432 Peptidase family M3 BADSM9389_RS09945 PF00419 Fimbrial protein BADSM9389_RS09950 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS09950 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS09955 PF13953 PapC C-terminal domain BADSM9389_RS09955 PF00577 Outer membrane usher protein BADSM9389_RS09955 PF13954 PapC N-terminal domain BADSM9389_RS09970 PF00072 Response regulator receiver domain BADSM9389_RS09970 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS09980 PF15977 Winged helix-turn-helix DNA binding BADSM9389_RS09990 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS09990 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS09995 PF13953 PapC C-terminal domain BADSM9389_RS09995 PF13954 PapC N-terminal domain BADSM9389_RS09995 PF00577 Outer membrane usher protein BADSM9389_RS10015 PF03061 Thioesterase superfamily BADSM9389_RS10025 PF04279 Intracellular septation protein A BADSM9389_RS10035 PF03922 OmpW family BADSM9389_RS10045 PF00290 Tryptophan synthase alpha chain BADSM9389_RS10050 PF00291 Pyridoxal-phosphate dependent enzyme BADSM9389_RS10055 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BADSM9389_RS10055 PF00218 Indole-3-glycerol phosphate synthase BADSM9389_RS10060 PF00117 Glutamine amidotransferase class-I BADSM9389_RS10060 PF00591 Glycosyl transferase family, a/b domain BADSM9389_RS10060 PF02885 Glycosyl transferase family, helical bundle domain BADSM9389_RS10065 PF00425 chorismate binding enzyme BADSM9389_RS10065 PF04715 Anthranilate synthase component I, N terminal region BADSM9389_RS10070 PF02811 PHP domain BADSM9389_RS10075 PF01300 Telomere recombination BADSM9389_RS10080 PF01479 S4 domain BADSM9389_RS10080 PF00849 RNA pseudouridylate synthase BADSM9389_RS10085 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BADSM9389_RS10085 PF12557 Cob(I)alamin adenosyltransferase N terminal BADSM9389_RS10090 PF00106 short chain dehydrogenase BADSM9389_RS10095 PF01343 Peptidase family S49 BADSM9389_RS10095 PF08496 Peptidase family S49 N-terminal BADSM9389_RS10100 PF10692 Protein of unknown function (DUF2498) BADSM9389_RS10105 PF01396 Topoisomerase DNA binding C4 zinc finger BADSM9389_RS10105 PF08272 Topoisomerase I zinc-ribbon-like BADSM9389_RS10105 PF01751 Toprim domain BADSM9389_RS10105 PF01131 DNA topoisomerase BADSM9389_RS10110 PF03466 LysR substrate binding domain BADSM9389_RS10110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS10125 PF00694 Aconitase C-terminal domain BADSM9389_RS10125 PF00330 Aconitase family (aconitate hydratase) BADSM9389_RS10130 PF00925 GTP cyclohydrolase II BADSM9389_RS10135 PF01569 PAP2 superfamily BADSM9389_RS10140 PF06305 Lipopolysaccharide assembly protein A domain BADSM9389_RS10145 PF18073 Rubredoxin metal binding domain BADSM9389_RS10150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BADSM9389_RS10155 PF01253 Translation initiation factor SUI1 BADSM9389_RS10160 PF05433 Glycine zipper 2TM domain BADSM9389_RS10165 PF08220 DeoR-like helix-turn-helix domain BADSM9389_RS10165 PF00455 DeoR C terminal sensor domain BADSM9389_RS10170 PF01228 Glycine radical BADSM9389_RS10170 PF02901 Pyruvate formate lyase-like BADSM9389_RS10175 PF04055 Radical SAM superfamily BADSM9389_RS10180 PF00923 Transaldolase/Fructose-6-phosphate aldolase BADSM9389_RS10190 PF00378 Enoyl-CoA hydratase/isomerase BADSM9389_RS10195 PF03466 LysR substrate binding domain BADSM9389_RS10195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS10205 PF00563 EAL domain BADSM9389_RS10205 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS10205 PF13426 PAS domain BADSM9389_RS10210 PF00773 RNB domain BADSM9389_RS10210 PF17876 Cold shock domain BADSM9389_RS10210 PF08206 Ribonuclease B OB domain BADSM9389_RS10210 PF00575 S1 RNA binding domain BADSM9389_RS10230 PF00005 ABC transporter BADSM9389_RS10235 PF00005 ABC transporter BADSM9389_RS10235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS10240 PF12911 N-terminal TM domain of oligopeptide transport permease C BADSM9389_RS10240 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS10245 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS10250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS10255 PF02954 Bacterial regulatory protein, Fis family BADSM9389_RS10255 PF00158 Sigma-54 interaction domain BADSM9389_RS10260 PF04012 PspA/IM30 family BADSM9389_RS10265 PF06667 Phage shock protein B BADSM9389_RS10270 PF04024 PspC domain BADSM9389_RS10275 PF09584 Phage shock protein PspD (Phageshock_PspD) BADSM9389_RS10280 PF00128 Alpha amylase, catalytic domain BADSM9389_RS10285 PF01547 Bacterial extracellular solute-binding protein BADSM9389_RS10290 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS10295 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS10300 PF00107 Zinc-binding dehydrogenase BADSM9389_RS10305 PF01261 Xylose isomerase-like TIM barrel BADSM9389_RS10310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BADSM9389_RS10310 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BADSM9389_RS10315 PF03636 Glycosyl hydrolase family 65, N-terminal domain BADSM9389_RS10315 PF03632 Glycosyl hydrolase family 65 central catalytic domain BADSM9389_RS10315 PF03633 Glycosyl hydrolase family 65, C-terminal domain BADSM9389_RS10320 PF13419 Haloacid dehalogenase-like hydrolase BADSM9389_RS10325 PF03459 TOBE domain BADSM9389_RS10325 PF17912 MalK OB fold domain BADSM9389_RS10325 PF00005 ABC transporter BADSM9389_RS10330 PF09381 Outer membrane protein G (OmpG) BADSM9389_RS10335 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS10335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BADSM9389_RS10340 PF04317 YcjX-like family, DUF463 BADSM9389_RS10345 PF05128 Domain of unknown function (DUF697) BADSM9389_RS10350 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal BADSM9389_RS10350 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BADSM9389_RS10355 PF13247 4Fe-4S dicluster domain BADSM9389_RS10360 PF03916 Polysulphide reductase, NrfD BADSM9389_RS10365 PF00374 Nickel-dependent hydrogenase BADSM9389_RS10370 PF01750 Hydrogenase maturation protease BADSM9389_RS10375 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE BADSM9389_RS10380 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BADSM9389_RS10385 PF01455 HupF/HypC family BADSM9389_RS10390 PF00158 Sigma-54 interaction domain BADSM9389_RS10390 PF13188 PAS domain BADSM9389_RS10390 PF18024 Helix-turn-helix domain BADSM9389_RS10395 PF08534 Redoxin BADSM9389_RS10400 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BADSM9389_RS10400 PF13378 Enolase C-terminal domain-like BADSM9389_RS10405 PF00246 Zinc carboxypeptidase BADSM9389_RS10410 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS10420 PF01590 GAF domain BADSM9389_RS10420 PF00360 Phytochrome region BADSM9389_RS10420 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS10420 PF00563 EAL domain BADSM9389_RS10425 PF01544 CorA-like Mg2+ transporter protein BADSM9389_RS10435 PF01171 PP-loop family BADSM9389_RS10445 PF06291 Bor protein BADSM9389_RS10450 PF00271 Helicase conserved C-terminal domain BADSM9389_RS10450 PF03880 DbpA RNA binding domain BADSM9389_RS10450 PF00270 DEAD/DEAH box helicase BADSM9389_RS10455 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BADSM9389_RS10455 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BADSM9389_RS10460 PF01292 Prokaryotic cytochrome b561 BADSM9389_RS10485 PF02583 Metal-sensitive transcriptional repressor BADSM9389_RS10490 PF08240 Alcohol dehydrogenase GroES-like domain BADSM9389_RS10490 PF00107 Zinc-binding dehydrogenase BADSM9389_RS10495 PF10829 Protein of unknown function (DUF2554) BADSM9389_RS10500 PF00893 Small Multidrug Resistance protein BADSM9389_RS10505 PF13632 Glycosyl transferase family group 2 BADSM9389_RS10505 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BADSM9389_RS10510 PF13283 Bacteriophage N adsorption protein A C-term BADSM9389_RS10515 PF14488 Domain of unknown function (DUF4434) BADSM9389_RS10525 PF02322 Cytochrome bd terminal oxidase subunit II BADSM9389_RS10530 PF01654 Cytochrome bd terminal oxidase subunit I BADSM9389_RS10540 PF00155 Aminotransferase class I and II BADSM9389_RS10540 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS10545 PF13302 Acetyltransferase (GNAT) domain BADSM9389_RS10560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BADSM9389_RS10565 PF13416 Bacterial extracellular solute-binding protein BADSM9389_RS10570 PF00005 ABC transporter BADSM9389_RS10570 PF08402 TOBE domain BADSM9389_RS10575 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS10580 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS10585 PF00171 Aldehyde dehydrogenase family BADSM9389_RS10595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS10595 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS10600 PF11742 Protein of unknown function (DUF3302) BADSM9389_RS10605 PF10753 Toxin GhoT_OrtT BADSM9389_RS10615 PF04325 Protein of unknown function (DUF465) BADSM9389_RS10620 PF04954 Siderophore-interacting protein BADSM9389_RS10620 PF08021 Siderophore-interacting FAD-binding domain BADSM9389_RS10630 PF00672 HAMP domain BADSM9389_RS10630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BADSM9389_RS10630 PF02203 Tar ligand binding domain homologue BADSM9389_RS10635 PF07804 HipA-like C-terminal domain BADSM9389_RS10640 PF13657 HipA N-terminal domain BADSM9389_RS10645 PF01381 Helix-turn-helix BADSM9389_RS10650 PF00296 Luciferase-like monooxygenase BADSM9389_RS10655 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS10655 PF07687 Peptidase dimerisation domain BADSM9389_RS10660 PF00296 Luciferase-like monooxygenase BADSM9389_RS10675 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS10680 PF00005 ABC transporter BADSM9389_RS10700 PF03222 Tryptophan/tyrosine permease family BADSM9389_RS10710 PF03466 LysR substrate binding domain BADSM9389_RS10710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS10715 PF02728 Copper amine oxidase, N3 domain BADSM9389_RS10715 PF02727 Copper amine oxidase, N2 domain BADSM9389_RS10715 PF01179 Copper amine oxidase, enzyme domain BADSM9389_RS10715 PF07833 Copper amine oxidase N-terminal domain BADSM9389_RS10720 PF00171 Aldehyde dehydrogenase family BADSM9389_RS10720 PF01575 MaoC like domain BADSM9389_RS10725 PF05138 Phenylacetic acid catabolic protein BADSM9389_RS10730 PF06243 Phenylacetic acid degradation B BADSM9389_RS10735 PF05138 Phenylacetic acid catabolic protein BADSM9389_RS10740 PF01883 Iron-sulfur cluster assembly protein BADSM9389_RS10745 PF00175 Oxidoreductase NAD-binding domain BADSM9389_RS10745 PF00111 2Fe-2S iron-sulfur cluster binding domain BADSM9389_RS10745 PF00970 Oxidoreductase FAD-binding domain BADSM9389_RS10750 PF00378 Enoyl-CoA hydratase/isomerase BADSM9389_RS10755 PF00378 Enoyl-CoA hydratase/isomerase BADSM9389_RS10760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BADSM9389_RS10760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BADSM9389_RS10760 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain BADSM9389_RS10765 PF03061 Thioesterase superfamily BADSM9389_RS10770 PF00108 Thiolase, N-terminal domain BADSM9389_RS10770 PF02803 Thiolase, C-terminal domain BADSM9389_RS10775 PF14535 AMP-binding enzyme C-terminal domain BADSM9389_RS10775 PF00501 AMP-binding enzyme BADSM9389_RS10790 PF07848 PaaX-like protein BADSM9389_RS10790 PF08223 PaaX-like protein C-terminal domain BADSM9389_RS10795 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS10800 PF12833 Helix-turn-helix domain BADSM9389_RS10800 PF14525 AraC-binding-like domain BADSM9389_RS10805 PF00171 Aldehyde dehydrogenase family BADSM9389_RS10815 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS10820 PF00664 ABC transporter transmembrane region BADSM9389_RS10820 PF00005 ABC transporter BADSM9389_RS10830 PF08349 Protein of unknown function (DUF1722) BADSM9389_RS10835 PF13411 MerR HTH family regulatory protein BADSM9389_RS10840 PF08212 Lipocalin-like domain BADSM9389_RS10855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS10855 PF03466 LysR substrate binding domain BADSM9389_RS10865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS10870 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS10870 PF07687 Peptidase dimerisation domain BADSM9389_RS10880 PF04408 Helicase associated domain (HA2) BADSM9389_RS10880 PF00270 DEAD/DEAH box helicase BADSM9389_RS10880 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BADSM9389_RS10880 PF00271 Helicase conserved C-terminal domain BADSM9389_RS10880 PF11898 Domain of unknown function (DUF3418) BADSM9389_RS10885 PF02525 Flavodoxin-like fold BADSM9389_RS10890 PF00282 Pyridoxal-dependent decarboxylase conserved domain BADSM9389_RS10895 PF00202 Aminotransferase class-III BADSM9389_RS10900 PF07027 Protein of unknown function (DUF1318) BADSM9389_RS10905 PF13617 YnbE-like lipoprotein BADSM9389_RS10910 PF11739 Dicarboxylate transport BADSM9389_RS10915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BADSM9389_RS10915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BADSM9389_RS10920 PF03724 META domain BADSM9389_RS10925 PF03891 Domain of unknown function (DUF333) BADSM9389_RS10930 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BADSM9389_RS10930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BADSM9389_RS10930 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BADSM9389_RS10930 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BADSM9389_RS10930 PF10371 Domain of unknown function BADSM9389_RS10935 PF13472 GDSL-like Lipase/Acylhydrolase family BADSM9389_RS10935 PF07859 alpha/beta hydrolase fold BADSM9389_RS10945 PF00171 Aldehyde dehydrogenase family BADSM9389_RS10950 PF13936 Helix-turn-helix domain BADSM9389_RS10950 PF04198 Putative sugar-binding domain BADSM9389_RS10955 PF13407 Periplasmic binding protein domain BADSM9389_RS10965 PF00005 ABC transporter BADSM9389_RS10970 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS10975 PF00456 Transketolase, thiamine diphosphate binding domain BADSM9389_RS10980 PF02780 Transketolase, C-terminal domain BADSM9389_RS10980 PF02779 Transketolase, pyrimidine binding domain BADSM9389_RS10985 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BADSM9389_RS10985 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BADSM9389_RS10995 PF02698 DUF218 domain BADSM9389_RS11000 PF00128 Alpha amylase, catalytic domain BADSM9389_RS11000 PF16657 Maltogenic Amylase, C-terminal domain BADSM9389_RS11005 PF00128 Alpha amylase, catalytic domain BADSM9389_RS11005 PF16657 Maltogenic Amylase, C-terminal domain BADSM9389_RS11010 PF17912 MalK OB fold domain BADSM9389_RS11010 PF00005 ABC transporter BADSM9389_RS11015 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS11020 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS11025 PF01547 Bacterial extracellular solute-binding protein BADSM9389_RS11040 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BADSM9389_RS11040 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BADSM9389_RS11045 PF01261 Xylose isomerase-like TIM barrel BADSM9389_RS11050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BADSM9389_RS11050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BADSM9389_RS11055 PF03825 Nucleoside H+ symporter BADSM9389_RS11060 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS11080 PF00672 HAMP domain BADSM9389_RS11080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BADSM9389_RS11080 PF02203 Tar ligand binding domain homologue BADSM9389_RS11085 PF01717 Cobalamin-independent synthase, Catalytic domain BADSM9389_RS11090 PF01062 Bestrophin, RFP-TM, chloride channel BADSM9389_RS11105 PF01965 DJ-1/PfpI family BADSM9389_RS11110 PF11776 Nickel/cobalt transporter regulator BADSM9389_RS11130 PF13649 Methyltransferase domain BADSM9389_RS11135 PF06719 AraC-type transcriptional regulator N-terminus BADSM9389_RS11135 PF12833 Helix-turn-helix domain BADSM9389_RS11140 PF00171 Aldehyde dehydrogenase family BADSM9389_RS11145 PF00171 Aldehyde dehydrogenase family BADSM9389_RS11155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS11155 PF03466 LysR substrate binding domain BADSM9389_RS11160 PF01136 Peptidase family U32 BADSM9389_RS11160 PF12392 Collagenase BADSM9389_RS11165 PF00563 EAL domain BADSM9389_RS11165 PF03707 Bacterial signalling protein N terminal repeat BADSM9389_RS11165 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS11170 PF03594 Benzoate membrane transport protein BADSM9389_RS11175 PF12833 Helix-turn-helix domain BADSM9389_RS11185 PF11769 Protein of unknown function (DUF3313) BADSM9389_RS11190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BADSM9389_RS11195 PF03848 Tellurite resistance protein TehB BADSM9389_RS11200 PF03595 Voltage-dependent anion channel BADSM9389_RS11205 PF18836 Beta solenoid repeat from YDCK BADSM9389_RS11210 PF13302 Acetyltransferase (GNAT) domain BADSM9389_RS11215 PF01494 FAD binding domain BADSM9389_RS11225 PF04349 Periplasmic glucan biosynthesis protein, MdoG BADSM9389_RS11230 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS11235 PF00155 Aminotransferase class I and II BADSM9389_RS11240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS11240 PF03466 LysR substrate binding domain BADSM9389_RS11245 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS11245 PF00072 Response regulator receiver domain BADSM9389_RS11250 PF05231 MASE1 BADSM9389_RS11250 PF07730 Histidine kinase BADSM9389_RS11250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS11255 PF07690 Major Facilitator Superfamily BADSM9389_RS11265 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS11270 PF08402 TOBE domain BADSM9389_RS11270 PF00005 ABC transporter BADSM9389_RS11275 PF07063 Domain of unknown function (DUF1338) BADSM9389_RS11280 PF00775 Dioxygenase BADSM9389_RS11280 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BADSM9389_RS11285 PF00775 Dioxygenase BADSM9389_RS11290 PF03466 LysR substrate binding domain BADSM9389_RS11290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS11295 PF02627 Carboxymuconolactone decarboxylase family BADSM9389_RS11300 PF12146 Serine aminopeptidase, S33 BADSM9389_RS11305 PF00206 Lyase BADSM9389_RS11305 PF10397 Adenylosuccinate lyase C-terminus BADSM9389_RS11310 PF00108 Thiolase, N-terminal domain BADSM9389_RS11310 PF02803 Thiolase, C-terminal domain BADSM9389_RS11315 PF01144 Coenzyme A transferase BADSM9389_RS11320 PF01144 Coenzyme A transferase BADSM9389_RS11325 PF01614 Bacterial transcriptional regulator BADSM9389_RS11325 PF09339 IclR helix-turn-helix domain BADSM9389_RS11330 PF01713 Smr domain BADSM9389_RS11335 PF03466 LysR substrate binding domain BADSM9389_RS11335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS11340 PF07687 Peptidase dimerisation domain BADSM9389_RS11340 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS11345 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS11350 PF03806 AbgT putative transporter family BADSM9389_RS11355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BADSM9389_RS11355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BADSM9389_RS11360 PF00027 Cyclic nucleotide-binding domain BADSM9389_RS11360 PF00325 Bacterial regulatory proteins, crp family BADSM9389_RS11365 PF00582 Universal stress protein family BADSM9389_RS11370 PF01848 Hok/gef family BADSM9389_RS11380 PF02233 NAD(P) transhydrogenase beta subunit BADSM9389_RS11385 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BADSM9389_RS11385 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BADSM9389_RS11385 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BADSM9389_RS11390 PF07338 Protein of unknown function (DUF1471) BADSM9389_RS11395 PF13520 Amino acid permease BADSM9389_RS11405 PF00072 Response regulator receiver domain BADSM9389_RS11405 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS11410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS11410 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS11410 PF00672 HAMP domain BADSM9389_RS11415 PF05472 DNA replication terminus site-binding protein (Ter protein) BADSM9389_RS11420 PF10415 Fumarase C C-terminus BADSM9389_RS11420 PF00206 Lyase BADSM9389_RS11425 PF05683 Fumarase C-terminus BADSM9389_RS11425 PF05681 Fumarate hydratase (Fumerase) BADSM9389_RS11430 PF01238 Phosphomannose isomerase type I BADSM9389_RS11435 PF06097 Bacterial protein of unknown function (DUF945) BADSM9389_RS11440 PF14864 Alkyl sulfatase C-terminal BADSM9389_RS11440 PF14863 Alkyl sulfatase dimerisation BADSM9389_RS11440 PF00753 Metallo-beta-lactamase superfamily BADSM9389_RS11445 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS11445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BADSM9389_RS11450 PF00367 phosphotransferase system, EIIB BADSM9389_RS11450 PF02378 Phosphotransferase system, EIIC BADSM9389_RS11455 PF00155 Aminotransferase class I and II BADSM9389_RS11460 PF00962 Adenosine/AMP deaminase BADSM9389_RS11465 PF13593 SBF-like CPA transporter family (DUF4137) BADSM9389_RS11470 PF06788 Uncharacterised protein family (UPF0257) BADSM9389_RS11475 PF06649 Protein of unknown function (DUF1161) BADSM9389_RS11480 PF00384 Molybdopterin oxidoreductase BADSM9389_RS11480 PF01568 Molydopterin dinucleotide binding domain BADSM9389_RS11480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BADSM9389_RS11485 PF12800 4Fe-4S binding domain BADSM9389_RS11485 PF13247 4Fe-4S dicluster domain BADSM9389_RS11490 PF04976 DMSO reductase anchor subunit (DmsC) BADSM9389_RS11495 PF02613 Nitrate reductase delta subunit BADSM9389_RS11500 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS11505 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BADSM9389_RS11510 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS11515 PF00571 CBS domain BADSM9389_RS11515 PF00005 ABC transporter BADSM9389_RS11520 PF00654 Voltage gated chloride channel BADSM9389_RS11530 PF00480 ROK family BADSM9389_RS11535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS11535 PF03466 LysR substrate binding domain BADSM9389_RS11540 PF07690 Major Facilitator Superfamily BADSM9389_RS11545 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BADSM9389_RS11555 PF00089 Trypsin BADSM9389_RS11560 PF00893 Small Multidrug Resistance protein BADSM9389_RS11565 PF00893 Small Multidrug Resistance protein BADSM9389_RS11570 PF01594 AI-2E family transporter BADSM9389_RS11575 PF01361 Tautomerase enzyme BADSM9389_RS11580 PF00797 N-acetyltransferase BADSM9389_RS11585 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS11590 PF02837 Glycosyl hydrolases family 2, sugar binding domain BADSM9389_RS11590 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BADSM9389_RS11590 PF00703 Glycosyl hydrolases family 2 BADSM9389_RS11590 PF16353 Domain of unknown function(DUF4981) BADSM9389_RS11590 PF02929 Beta galactosidase small chain BADSM9389_RS11595 PF00324 Amino acid permease BADSM9389_RS11600 PF07715 TonB-dependent Receptor Plug Domain BADSM9389_RS11600 PF00593 TonB dependent receptor BADSM9389_RS11605 PF03544 Gram-negative bacterial TonB protein C-terminal BADSM9389_RS11610 PF03795 YCII-related domain BADSM9389_RS11625 PF13396 Phospholipase_D-nuclease N-terminal BADSM9389_RS11625 PF13091 PLD-like domain BADSM9389_RS11630 PF04269 Protein of unknown function, DUF440 BADSM9389_RS11635 PF00520 Ion transport protein BADSM9389_RS11635 PF00027 Cyclic nucleotide-binding domain BADSM9389_RS11640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS11640 PF00005 ABC transporter BADSM9389_RS11645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BADSM9389_RS11645 PF00005 ABC transporter BADSM9389_RS11650 PF12911 N-terminal TM domain of oligopeptide transport permease C BADSM9389_RS11650 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS11655 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS11660 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS11665 PF01914 MarC family integral membrane protein BADSM9389_RS11670 PF00465 Iron-containing alcohol dehydrogenase BADSM9389_RS11670 PF00171 Aldehyde dehydrogenase family BADSM9389_RS11675 PF00265 Thymidine kinase BADSM9389_RS11680 PF00816 H-NS histone family BADSM9389_RS11685 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BADSM9389_RS11685 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BADSM9389_RS11685 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BADSM9389_RS11690 PF00483 Nucleotidyl transferase BADSM9389_RS11695 PF00072 Response regulator receiver domain BADSM9389_RS11700 PF01734 Patatin-like phospholipase BADSM9389_RS11705 PF02810 SEC-C motif BADSM9389_RS11710 PF01842 ACT domain BADSM9389_RS11710 PF00551 Formyl transferase BADSM9389_RS11725 PF02665 Nitrate reductase gamma subunit BADSM9389_RS11730 PF02613 Nitrate reductase delta subunit BADSM9389_RS11735 PF13247 4Fe-4S dicluster domain BADSM9389_RS11735 PF14711 Respiratory nitrate reductase beta C-terminal BADSM9389_RS11740 PF00384 Molybdopterin oxidoreductase BADSM9389_RS11740 PF01568 Molydopterin dinucleotide binding domain BADSM9389_RS11740 PF14710 Respiratory nitrate reductase alpha N-terminal BADSM9389_RS11745 PF07690 Major Facilitator Superfamily BADSM9389_RS11750 PF01261 Xylose isomerase-like TIM barrel BADSM9389_RS11755 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS11755 PF07702 UTRA domain BADSM9389_RS11760 PF07690 Major Facilitator Superfamily BADSM9389_RS11765 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BADSM9389_RS11765 PF07730 Histidine kinase BADSM9389_RS11765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS11765 PF00672 HAMP domain BADSM9389_RS11770 PF00072 Response regulator receiver domain BADSM9389_RS11770 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS11775 PF11924 Inverse autotransporter, beta-domain BADSM9389_RS11780 PF01568 Molydopterin dinucleotide binding domain BADSM9389_RS11780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BADSM9389_RS11780 PF04324 BFD-like [2Fe-2S] binding domain BADSM9389_RS11780 PF00384 Molybdopterin oxidoreductase BADSM9389_RS11785 PF04324 BFD-like [2Fe-2S] binding domain BADSM9389_RS11785 PF18267 Rubredoxin NAD+ reductase C-terminal domain BADSM9389_RS11785 PF13806 Rieske-like [2Fe-2S] domain BADSM9389_RS11785 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS11785 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BADSM9389_RS11785 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BADSM9389_RS11790 PF00005 ABC transporter BADSM9389_RS11795 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS11805 PF03861 ANTAR domain BADSM9389_RS11805 PF08376 Nitrate and nitrite sensing BADSM9389_RS11810 PF02635 DsrE/DsrF-like family BADSM9389_RS11820 PF04752 ChaC-like protein BADSM9389_RS11825 PF06150 ChaB BADSM9389_RS11830 PF01699 Sodium/calcium exchanger protein BADSM9389_RS11835 PF00793 DAHP synthetase I family BADSM9389_RS11840 PF13369 Transglutaminase-like superfamily BADSM9389_RS11845 PF04247 Invasion gene expression up-regulator, SirB BADSM9389_RS11850 PF17827 PrmC N-terminal domain BADSM9389_RS11850 PF13847 Methyltransferase domain BADSM9389_RS11855 PF00472 RF-1 domain BADSM9389_RS11855 PF03462 PCRF domain BADSM9389_RS11860 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BADSM9389_RS11860 PF01488 Shikimate / quinate 5-dehydrogenase BADSM9389_RS11860 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BADSM9389_RS11865 PF03550 Outer membrane lipoprotein LolB BADSM9389_RS11870 PF08544 GHMP kinases C terminal BADSM9389_RS11870 PF00288 GHMP kinases N terminal domain BADSM9389_RS11875 PF14572 Phosphoribosyl synthetase-associated domain BADSM9389_RS11875 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BADSM9389_RS11880 PF01740 STAS domain BADSM9389_RS11880 PF00916 Sulfate permease family BADSM9389_RS11885 PF10762 Protein of unknown function (DUF2583) BADSM9389_RS11890 PF01195 Peptidyl-tRNA hydrolase BADSM9389_RS11895 PF06071 Protein of unknown function (DUF933) BADSM9389_RS11895 PF01926 50S ribosome-binding GTPase BADSM9389_RS11905 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS11905 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS11910 PF00577 Outer membrane usher protein BADSM9389_RS11910 PF13954 PapC N-terminal domain BADSM9389_RS11910 PF13953 PapC C-terminal domain BADSM9389_RS11915 PF00419 Fimbrial protein BADSM9389_RS11940 PF01306 LacY proton/sugar symporter BADSM9389_RS11945 PF02929 Beta galactosidase small chain BADSM9389_RS11945 PF16353 Domain of unknown function(DUF4981) BADSM9389_RS11945 PF00703 Glycosyl hydrolases family 2 BADSM9389_RS11945 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BADSM9389_RS11945 PF02837 Glycosyl hydrolases family 2, sugar binding domain BADSM9389_RS11950 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS11955 PF00360 Phytochrome region BADSM9389_RS11955 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS11955 PF01590 GAF domain BADSM9389_RS11955 PF00563 EAL domain BADSM9389_RS11960 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS11960 PF03707 Bacterial signalling protein N terminal repeat BADSM9389_RS11960 PF00563 EAL domain BADSM9389_RS11980 PF00815 Histidinol dehydrogenase BADSM9389_RS11995 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS12000 PF07690 Major Facilitator Superfamily BADSM9389_RS12005 PF00815 Histidinol dehydrogenase BADSM9389_RS12015 PF08241 Methyltransferase domain BADSM9389_RS12015 PF12697 Alpha/beta hydrolase family BADSM9389_RS12020 PF03328 HpcH/HpaI aldolase/citrate lyase family BADSM9389_RS12035 PF02887 Pyruvate kinase, alpha/beta domain BADSM9389_RS12035 PF00224 Pyruvate kinase, barrel domain BADSM9389_RS12040 PF04728 Lipoprotein leucine-zipper BADSM9389_RS12045 PF17969 L,D-transpeptidase C-terminal domain BADSM9389_RS12045 PF03734 L,D-transpeptidase catalytic domain BADSM9389_RS12045 PF01476 LysM domain BADSM9389_RS12050 PF02657 Fe-S metabolism associated domain BADSM9389_RS12055 PF00266 Aminotransferase class-V BADSM9389_RS12060 PF01458 Uncharacterized protein family (UPF0051) BADSM9389_RS12065 PF00005 ABC transporter BADSM9389_RS12070 PF01458 Uncharacterized protein family (UPF0051) BADSM9389_RS12075 PF01521 Iron-sulphur cluster biosynthesis BADSM9389_RS12090 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS12090 PF00072 Response regulator receiver domain BADSM9389_RS12095 PF08448 PAS fold BADSM9389_RS12095 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS12095 PF00072 Response regulator receiver domain BADSM9389_RS12095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS12095 PF13426 PAS domain BADSM9389_RS12100 PF00293 NUDIX domain BADSM9389_RS12110 PF01381 Helix-turn-helix BADSM9389_RS12115 PF03061 Thioesterase superfamily BADSM9389_RS12120 PF01565 FAD binding domain BADSM9389_RS12120 PF13183 4Fe-4S dicluster domain BADSM9389_RS12120 PF02913 FAD linked oxidases, C-terminal domain BADSM9389_RS12125 PF01594 AI-2E family transporter BADSM9389_RS12135 PF14310 Fibronectin type III-like domain BADSM9389_RS12135 PF00933 Glycosyl hydrolase family 3 N terminal domain BADSM9389_RS12135 PF01915 Glycosyl hydrolase family 3 C-terminal domain BADSM9389_RS12145 PF00391 PEP-utilising enzyme, mobile domain BADSM9389_RS12145 PF02896 PEP-utilising enzyme, TIM barrel domain BADSM9389_RS12145 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BADSM9389_RS12150 PF03618 Kinase/pyrophosphorylase BADSM9389_RS12155 PF00793 DAHP synthetase I family BADSM9389_RS12160 PF10636 Hemin uptake protein hemP BADSM9389_RS12165 PF07715 TonB-dependent Receptor Plug Domain BADSM9389_RS12165 PF00593 TonB dependent receptor BADSM9389_RS12170 PF05171 Haemin-degrading HemS.ChuX domain BADSM9389_RS12175 PF01497 Periplasmic binding protein BADSM9389_RS12180 PF01032 FecCD transport family BADSM9389_RS12185 PF00005 ABC transporter BADSM9389_RS12190 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BADSM9389_RS12195 PF00563 EAL domain BADSM9389_RS12200 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS12205 PF00877 NlpC/P60 family BADSM9389_RS12210 PF00005 ABC transporter BADSM9389_RS12215 PF00255 Glutathione peroxidase BADSM9389_RS12220 PF01032 FecCD transport family BADSM9389_RS12225 PF00216 Bacterial DNA-binding protein BADSM9389_RS12230 PF03147 Ferredoxin-fold anticodon binding domain BADSM9389_RS12230 PF03483 B3/4 domain BADSM9389_RS12230 PF01588 Putative tRNA binding domain BADSM9389_RS12230 PF03484 tRNA synthetase B5 domain BADSM9389_RS12230 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BADSM9389_RS12235 PF01409 tRNA synthetases class II core domain (F) BADSM9389_RS12235 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BADSM9389_RS12245 PF00453 Ribosomal protein L20 BADSM9389_RS12250 PF01632 Ribosomal protein L35 BADSM9389_RS12255 PF00707 Translation initiation factor IF-3, C-terminal domain BADSM9389_RS12255 PF05198 Translation initiation factor IF-3, N-terminal domain BADSM9389_RS12260 PF02824 TGS domain BADSM9389_RS12260 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BADSM9389_RS12260 PF03129 Anticodon binding domain BADSM9389_RS12260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BADSM9389_RS12270 PF04338 Protein of unknown function, DUF481 BADSM9389_RS12275 PF00294 pfkB family carbohydrate kinase BADSM9389_RS12280 PF11080 Endoribonuclease GhoS BADSM9389_RS12285 PF03881 Fructosamine kinase BADSM9389_RS12290 PF14002 YniB-like protein BADSM9389_RS12295 PF13419 Haloacid dehalogenase-like hydrolase BADSM9389_RS12305 PF04307 LexA-binding, inner membrane-associated putative hydrolase BADSM9389_RS12315 PF08238 Sel1 repeat BADSM9389_RS12320 PF10729 Cell division activator CedA BADSM9389_RS12325 PF18011 C-terminal domain found in long catalases BADSM9389_RS12325 PF06628 Catalase-related immune-responsive BADSM9389_RS12325 PF00199 Catalase BADSM9389_RS12330 PF04355 SmpA / OmlA family BADSM9389_RS12335 PF02540 NAD synthase BADSM9389_RS12340 PF00892 EamA-like transporter family BADSM9389_RS12345 PF17391 Urocanase N-terminal domain BADSM9389_RS12345 PF17392 Urocanase C-terminal domain BADSM9389_RS12345 PF01175 Urocanase Rossmann-like domain BADSM9389_RS12350 PF00221 Aromatic amino acid lyase BADSM9389_RS12355 PF07702 UTRA domain BADSM9389_RS12355 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS12360 PF05962 HutD BADSM9389_RS12365 PF01979 Amidohydrolase family BADSM9389_RS12370 PF01979 Amidohydrolase family BADSM9389_RS12380 PF07813 LTXXQ motif family protein BADSM9389_RS12385 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BADSM9389_RS12390 PF04996 Succinylarginine dihydrolase BADSM9389_RS12395 PF00171 Aldehyde dehydrogenase family BADSM9389_RS12400 PF04958 Arginine N-succinyltransferase beta subunit BADSM9389_RS12405 PF00202 Aminotransferase class-III BADSM9389_RS12410 PF03372 Endonuclease/Exonuclease/phosphatase family BADSM9389_RS12415 PF09335 SNARE associated Golgi protein BADSM9389_RS12420 PF13416 Bacterial extracellular solute-binding protein BADSM9389_RS12425 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS12430 PF00005 ABC transporter BADSM9389_RS12435 PF00581 Rhodanese-like domain BADSM9389_RS12440 PF01066 CDP-alcohol phosphatidyltransferase BADSM9389_RS12445 PF02627 Carboxymuconolactone decarboxylase family BADSM9389_RS12450 PF00293 NUDIX domain BADSM9389_RS12455 PF07383 Protein of unknown function (DUF1496) BADSM9389_RS12460 PF01751 Toprim domain BADSM9389_RS12460 PF01131 DNA topoisomerase BADSM9389_RS12465 PF00586 AIR synthase related protein, N-terminal domain BADSM9389_RS12465 PF02769 AIR synthase related protein, C-terminal domain BADSM9389_RS12470 PF00881 Nitroreductase family BADSM9389_RS12475 PF01343 Peptidase family S49 BADSM9389_RS12480 PF00710 Asparaginase, N-terminal BADSM9389_RS12480 PF17763 Glutaminase/Asparaginase C-terminal domain BADSM9389_RS12485 PF00857 Isochorismatase family BADSM9389_RS12490 PF00704 Glycosyl hydrolases family 18 BADSM9389_RS12495 PF07023 Protein of unknown function (DUF1315) BADSM9389_RS12500 PF01641 SelR domain BADSM9389_RS12505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BADSM9389_RS12505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BADSM9389_RS12510 PF01263 Aldose 1-epimerase BADSM9389_RS12515 PF00248 Aldo/keto reductase family BADSM9389_RS12520 PF06629 MltA-interacting protein MipA BADSM9389_RS12525 PF06798 PrkA serine protein kinase C-terminal domain BADSM9389_RS12525 PF08298 PrkA AAA domain BADSM9389_RS12530 PF04285 Protein of unknown function (DUF444) BADSM9389_RS12535 PF17155 Gammaproteobacterial periplasmic sensor domain BADSM9389_RS12535 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS12545 PF04284 Protein of unknown function (DUF441) BADSM9389_RS12550 PF12833 Helix-turn-helix domain BADSM9389_RS12550 PF02311 AraC-like ligand binding domain BADSM9389_RS12555 PF07690 Major Facilitator Superfamily BADSM9389_RS12560 PF00117 Glutamine amidotransferase class-I BADSM9389_RS12560 PF06418 CTP synthase N-terminus BADSM9389_RS12565 PF04463 Protein of unknown function (DUF523) BADSM9389_RS12575 PF01679 Proteolipid membrane potential modulator BADSM9389_RS12580 PF00313 'Cold-shock' DNA-binding domain BADSM9389_RS12585 PF01464 Transglycosylase SLT domain BADSM9389_RS12585 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS12590 PF06183 DinI-like family BADSM9389_RS12605 PF00180 Isocitrate/isopropylmalate dehydrogenase BADSM9389_RS12610 PF00849 RNA pseudouridylate synthase BADSM9389_RS12615 PF02142 MGS-like domain BADSM9389_RS12620 PF00293 NUDIX domain BADSM9389_RS12630 PF04356 Protein of unknown function (DUF489) BADSM9389_RS12635 PF00206 Lyase BADSM9389_RS12635 PF08328 Adenylosuccinate lyase C-terminal BADSM9389_RS12640 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS12640 PF00072 Response regulator receiver domain BADSM9389_RS12645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS12645 PF08918 PhoQ Sensor BADSM9389_RS12650 PF08007 Cupin superfamily protein BADSM9389_RS12665 PF07687 Peptidase dimerisation domain BADSM9389_RS12665 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS12670 PF00005 ABC transporter BADSM9389_RS12670 PF08402 TOBE domain BADSM9389_RS12675 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS12680 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS12685 PF13416 Bacterial extracellular solute-binding protein BADSM9389_RS12700 PF04717 Type VI secretion system, phage-baseplate injector BADSM9389_RS12705 PF02146 Sir2 family BADSM9389_RS12710 PF00480 ROK family BADSM9389_RS12715 PF12704 MacB-like periplasmic core domain BADSM9389_RS12715 PF02687 FtsX-like permease family BADSM9389_RS12720 PF00005 ABC transporter BADSM9389_RS12725 PF12704 MacB-like periplasmic core domain BADSM9389_RS12725 PF02687 FtsX-like permease family BADSM9389_RS12730 PF01757 Acyltransferase family BADSM9389_RS12735 PF03461 TRCF domain BADSM9389_RS12735 PF00271 Helicase conserved C-terminal domain BADSM9389_RS12735 PF00270 DEAD/DEAH box helicase BADSM9389_RS12735 PF17757 UvrB interaction domain BADSM9389_RS12735 PF02559 CarD-like/TRCF domain BADSM9389_RS12740 PF17969 L,D-transpeptidase C-terminal domain BADSM9389_RS12740 PF01476 LysM domain BADSM9389_RS12740 PF03734 L,D-transpeptidase catalytic domain BADSM9389_RS12745 PF07338 Protein of unknown function (DUF1471) BADSM9389_RS12750 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS12755 PF07338 Protein of unknown function (DUF1471) BADSM9389_RS12760 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS12770 PF07715 TonB-dependent Receptor Plug Domain BADSM9389_RS12770 PF00593 TonB dependent receptor BADSM9389_RS12780 PF05433 Glycine zipper 2TM domain BADSM9389_RS12785 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS12790 PF05728 Uncharacterised protein family (UPF0227) BADSM9389_RS12795 PF00933 Glycosyl hydrolase family 3 N terminal domain BADSM9389_RS12800 PF01636 Phosphotransferase enzyme family BADSM9389_RS12805 PF13036 Peptidoglycan-synthase activator LpoB BADSM9389_RS12810 PF07233 Protein of unknown function (DUF1425) BADSM9389_RS12815 PF01230 HIT domain BADSM9389_RS12820 PF07715 TonB-dependent Receptor Plug Domain BADSM9389_RS12820 PF00593 TonB dependent receptor BADSM9389_RS12825 PF00367 phosphotransferase system, EIIB BADSM9389_RS12825 PF02378 Phosphotransferase system, EIIC BADSM9389_RS12830 PF01026 TatD related DNase BADSM9389_RS12835 PF09115 DNA polymerase III, delta subunit, C terminal BADSM9389_RS12840 PF02223 Thymidylate kinase BADSM9389_RS12845 PF02618 YceG-like family BADSM9389_RS12850 PF01063 Amino-transferase class IV BADSM9389_RS12855 PF00109 Beta-ketoacyl synthase, N-terminal domain BADSM9389_RS12855 PF02801 Beta-ketoacyl synthase, C-terminal domain BADSM9389_RS12860 PF00550 Phosphopantetheine attachment site BADSM9389_RS12870 PF00698 Acyl transferase domain BADSM9389_RS12875 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BADSM9389_RS12875 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BADSM9389_RS12880 PF02504 Fatty acid synthesis protein BADSM9389_RS12885 PF01783 Ribosomal L32p protein family BADSM9389_RS12890 PF02620 Large ribosomal RNA subunit accumulation protein YceD BADSM9389_RS12895 PF02545 Maf-like protein BADSM9389_RS12900 PF01479 S4 domain BADSM9389_RS12900 PF00849 RNA pseudouridylate synthase BADSM9389_RS12905 PF12111 Polyribonucleotide phosphorylase C terminal BADSM9389_RS12905 PF10150 Ribonuclease E/G family BADSM9389_RS12905 PF00575 S1 RNA binding domain BADSM9389_RS12910 PF00669 Bacterial flagellin N-terminal helical region BADSM9389_RS12915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BADSM9389_RS12915 PF00460 Flagella basal body rod protein BADSM9389_RS12920 PF10135 Rod binding protein BADSM9389_RS12920 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BADSM9389_RS12925 PF02119 Flagellar P-ring protein BADSM9389_RS12930 PF02107 Flagellar L-ring protein BADSM9389_RS12935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BADSM9389_RS12935 PF00460 Flagella basal body rod protein BADSM9389_RS12940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BADSM9389_RS12940 PF00460 Flagella basal body rod protein BADSM9389_RS12945 PF07559 Flagellar basal body protein FlaE BADSM9389_RS12945 PF00460 Flagella basal body rod protein BADSM9389_RS12945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BADSM9389_RS12950 PF03963 Flagellar hook capping protein - N-terminal region BADSM9389_RS12950 PF13861 FlgD Tudor-like domain BADSM9389_RS12950 PF13860 FlgD Ig-like domain BADSM9389_RS12955 PF00460 Flagella basal body rod protein BADSM9389_RS12955 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BADSM9389_RS12960 PF00460 Flagella basal body rod protein BADSM9389_RS12965 PF13144 Chaperone for flagella basal body P-ring formation BADSM9389_RS12970 PF04316 Anti-sigma-28 factor, FlgM BADSM9389_RS12975 PF05130 FlgN protein BADSM9389_RS12980 PF00313 'Cold-shock' DNA-binding domain BADSM9389_RS12985 PF03023 Lipid II flippase MurJ BADSM9389_RS12990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BADSM9389_RS12995 PF04337 Protein of unknown function, DUF480 BADSM9389_RS13000 PF13302 Acetyltransferase (GNAT) domain BADSM9389_RS13005 PF07690 Major Facilitator Superfamily BADSM9389_RS13010 PF04399 Glutaredoxin 2, C terminal domain BADSM9389_RS13010 PF13417 Glutathione S-transferase, N-terminal domain BADSM9389_RS13015 PF07273 Protein of unknown function (DUF1439) BADSM9389_RS13020 PF01979 Amidohydrolase family BADSM9389_RS13025 PF06183 DinI-like family BADSM9389_RS13030 PF13991 BssS protein family BADSM9389_RS13035 PF01266 FAD dependent oxidoreductase BADSM9389_RS13045 PF03279 Bacterial lipid A biosynthesis acyltransferase BADSM9389_RS13050 PF07690 Major Facilitator Superfamily BADSM9389_RS13055 PF13984 MsyB protein BADSM9389_RS13060 PF07119 Protein of unknown function (DUF1375) BADSM9389_RS13065 PF00535 Glycosyl transferase family 2 BADSM9389_RS13070 PF04349 Periplasmic glucan biosynthesis protein, MdoG BADSM9389_RS13075 PF01757 Acyltransferase family BADSM9389_RS13080 PF13091 PLD-like domain BADSM9389_RS13085 PF01661 Macro domain BADSM9389_RS13095 PF00704 Glycosyl hydrolases family 18 BADSM9389_RS13095 PF06483 Chitinase C BADSM9389_RS13100 PF03466 LysR substrate binding domain BADSM9389_RS13100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS13115 PF00704 Glycosyl hydrolases family 18 BADSM9389_RS13120 PF13520 Amino acid permease BADSM9389_RS13125 PF01276 Orn/Lys/Arg decarboxylase, major domain BADSM9389_RS13125 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BADSM9389_RS13125 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BADSM9389_RS13130 PF01648 4'-phosphopantetheinyl transferase superfamily BADSM9389_RS13135 PF00109 Beta-ketoacyl synthase, N-terminal domain BADSM9389_RS13135 PF02801 Beta-ketoacyl synthase, C-terminal domain BADSM9389_RS13150 PF02801 Beta-ketoacyl synthase, C-terminal domain BADSM9389_RS13150 PF00109 Beta-ketoacyl synthase, N-terminal domain BADSM9389_RS13175 PF00535 Glycosyl transferase family 2 BADSM9389_RS13180 PF07977 FabA-like domain BADSM9389_RS13185 PF00501 AMP-binding enzyme BADSM9389_RS13185 PF13193 AMP-binding enzyme C-terminal domain BADSM9389_RS13195 PF00550 Phosphopantetheine attachment site BADSM9389_RS13200 PF00550 Phosphopantetheine attachment site BADSM9389_RS13220 PF10610 Thin aggregative fimbriae synthesis protein BADSM9389_RS13230 PF07012 Curlin associated repeat BADSM9389_RS13235 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS13240 PF10627 Curli assembly protein CsgE BADSM9389_RS13245 PF10614 Type VIII secretion system (T8SS), CsgF protein BADSM9389_RS13250 PF03783 Curli production assembly/transport component CsgG BADSM9389_RS13255 PF06496 Protein of unknown function (DUF1097) BADSM9389_RS13260 PF02613 Nitrate reductase delta subunit BADSM9389_RS13265 PF02811 PHP domain BADSM9389_RS13270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BADSM9389_RS13285 PF00873 AcrB/AcrD/AcrF family BADSM9389_RS13290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS13290 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS13295 PF00873 AcrB/AcrD/AcrF family BADSM9389_RS13300 PF08361 MAATS-type transcriptional repressor, C-terminal region BADSM9389_RS13300 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS13305 PF04794 YdjC-like protein BADSM9389_RS13310 PF11975 Family 4 glycosyl hydrolase C-terminal domain BADSM9389_RS13310 PF02056 Family 4 glycosyl hydrolase BADSM9389_RS13315 PF07883 Cupin domain BADSM9389_RS13315 PF12833 Helix-turn-helix domain BADSM9389_RS13320 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BADSM9389_RS13325 PF02378 Phosphotransferase system, EIIC BADSM9389_RS13330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS13335 PF02562 PhoH-like protein BADSM9389_RS13340 PF04261 Dyp-type peroxidase family BADSM9389_RS13345 PF09375 Imelysin BADSM9389_RS13345 PF13473 Cupredoxin-like domain BADSM9389_RS13350 PF03239 Iron permease FTR1 family BADSM9389_RS13355 PF00474 Sodium:solute symporter family BADSM9389_RS13360 PF00171 Aldehyde dehydrogenase family BADSM9389_RS13360 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BADSM9389_RS13360 PF14850 DNA-binding domain of Proline dehydrogenase BADSM9389_RS13360 PF01619 Proline dehydrogenase BADSM9389_RS13370 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS13370 PF08362 YcdC-like protein, C-terminal region BADSM9389_RS13375 PF00296 Luciferase-like monooxygenase BADSM9389_RS13380 PF00857 Isochorismatase family BADSM9389_RS13385 PF01042 Endoribonuclease L-PSP BADSM9389_RS13390 PF00561 alpha/beta hydrolase fold BADSM9389_RS13395 PF00881 Nitroreductase family BADSM9389_RS13400 PF01613 Flavin reductase like domain BADSM9389_RS13405 PF00860 Permease family BADSM9389_RS13415 PF10685 Stress-induced bacterial acidophilic repeat motif BADSM9389_RS13420 PF03358 NADPH-dependent FMN reductase BADSM9389_RS13425 PF13993 YccJ-like protein BADSM9389_RS13430 PF00328 Histidine phosphatase superfamily (branch 2) BADSM9389_RS13435 PF00106 short chain dehydrogenase BADSM9389_RS13450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS13455 PF01027 Inhibitor of apoptosis-promoting Bax1 BADSM9389_RS13460 PF04358 DsrC like protein BADSM9389_RS13465 PF00708 Acylphosphatase BADSM9389_RS13470 PF17785 PUA-like domain BADSM9389_RS13470 PF10672 S-adenosylmethionine-dependent methyltransferase BADSM9389_RS13475 PF08755 Hemimethylated DNA-binding protein YccV like BADSM9389_RS13480 PF13380 CoA binding domain BADSM9389_RS13485 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BADSM9389_RS13490 PF02142 MGS-like domain BADSM9389_RS13495 PF13361 UvrD-like helicase C-terminal domain BADSM9389_RS13495 PF12462 DNA helicase IV / RNA helicase N terminal BADSM9389_RS13495 PF00580 UvrD/REP helicase N-terminal domain BADSM9389_RS13500 PF03733 Inner membrane component domain BADSM9389_RS13505 PF12805 FUSC-like inner membrane protein yccS BADSM9389_RS13510 PF04993 TfoX N-terminal domain BADSM9389_RS13510 PF04994 TfoX C-terminal domain BADSM9389_RS13515 PF03846 Cell division inhibitor SulA BADSM9389_RS13520 PF00691 OmpA family BADSM9389_RS13520 PF01389 OmpA-like transmembrane domain BADSM9389_RS13525 PF06303 MatP N-terminal domain BADSM9389_RS13525 PF17414 MatP C-terminal ribbon-helix-helix domain BADSM9389_RS13530 PF05362 Lon protease (S16) C-terminal proteolytic domain BADSM9389_RS13530 PF13654 AAA domain BADSM9389_RS13535 PF07977 FabA-like domain BADSM9389_RS13540 PF04957 Ribosome modulation factor BADSM9389_RS13545 PF03886 ABC-type transport auxiliary lipoprotein component BADSM9389_RS13550 PF02470 MlaD protein BADSM9389_RS13555 PF04403 Paraquat-inducible protein A BADSM9389_RS13560 PF16326 ABC transporter C-terminal domain BADSM9389_RS13560 PF00005 ABC transporter BADSM9389_RS13560 PF12848 ABC transporter BADSM9389_RS13565 PF01170 Putative RNA methylase family UPF0020 BADSM9389_RS13565 PF02926 THUMP domain BADSM9389_RS13565 PF10672 S-adenosylmethionine-dependent methyltransferase BADSM9389_RS13570 PF03476 MOSC N-terminal beta barrel domain BADSM9389_RS13570 PF03473 MOSC domain BADSM9389_RS13570 PF00111 2Fe-2S iron-sulfur cluster binding domain BADSM9389_RS13575 PF07126 Cell-division protein ZapC BADSM9389_RS13580 PF01180 Dihydroorotate dehydrogenase BADSM9389_RS13585 PF03358 NADPH-dependent FMN reductase BADSM9389_RS13590 PF09084 NMT1/THI5 like BADSM9389_RS13595 PF00296 Luciferase-like monooxygenase BADSM9389_RS13600 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS13605 PF00005 ABC transporter BADSM9389_RS13610 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BADSM9389_RS13610 PF11940 Domain of unknown function (DUF3458) Ig-like fold BADSM9389_RS13610 PF01433 Peptidase family M1 domain BADSM9389_RS13615 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BADSM9389_RS13615 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BADSM9389_RS13620 PF01336 OB-fold nucleic acid binding domain BADSM9389_RS13620 PF00152 tRNA synthetases class II (D, K and N) BADSM9389_RS13625 PF00267 Gram-negative porin BADSM9389_RS13630 PF00155 Aminotransferase class I and II BADSM9389_RS13635 PF00753 Metallo-beta-lactamase superfamily BADSM9389_RS13640 PF05951 Bacterial protein of unknown function (DUF882) BADSM9389_RS13645 PF03734 L,D-transpeptidase catalytic domain BADSM9389_RS13645 PF01471 Putative peptidoglycan binding domain BADSM9389_RS13650 PF16330 MukB hinge domain BADSM9389_RS13650 PF04310 MukB N-terminal BADSM9389_RS13655 PF04288 MukE-like family BADSM9389_RS13660 PF17193 MukF C-terminal domain BADSM9389_RS13660 PF17192 MukF middle domain BADSM9389_RS13660 PF03882 MukF winged-helix domain BADSM9389_RS13665 PF13847 Methyltransferase domain BADSM9389_RS13670 PF02698 DUF218 domain BADSM9389_RS13675 PF01636 Phosphotransferase enzyme family BADSM9389_RS13680 PF02348 Cytidylyltransferase BADSM9389_RS13685 PF03966 Trm112p-like protein BADSM9389_RS13690 PF06224 Winged helix DNA-binding domain BADSM9389_RS13695 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BADSM9389_RS13700 PF00005 ABC transporter BADSM9389_RS13700 PF00664 ABC transporter transmembrane region BADSM9389_RS13705 PF03772 Competence protein BADSM9389_RS13705 PF00753 Metallo-beta-lactamase superfamily BADSM9389_RS13710 PF00216 Bacterial DNA-binding protein BADSM9389_RS13715 PF00575 S1 RNA binding domain BADSM9389_RS13720 PF02224 Cytidylate kinase BADSM9389_RS13730 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BADSM9389_RS13735 PF00266 Aminotransferase class-V BADSM9389_RS13740 PF04239 Protein of unknown function (DUF421) BADSM9389_RS13745 PF18381 YcaO cyclodehydratase C-terminal domain BADSM9389_RS13745 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BADSM9389_RS13750 PF01226 Formate/nitrite transporter BADSM9389_RS13755 PF02901 Pyruvate formate lyase-like BADSM9389_RS13755 PF01228 Glycine radical BADSM9389_RS13760 PF04055 Radical SAM superfamily BADSM9389_RS13765 PF07690 Major Facilitator Superfamily BADSM9389_RS13770 PF04976 DMSO reductase anchor subunit (DmsC) BADSM9389_RS13775 PF12800 4Fe-4S binding domain BADSM9389_RS13775 PF13247 4Fe-4S dicluster domain BADSM9389_RS13780 PF01568 Molydopterin dinucleotide binding domain BADSM9389_RS13780 PF00384 Molybdopterin oxidoreductase BADSM9389_RS13780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BADSM9389_RS13785 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BADSM9389_RS13785 PF02403 Seryl-tRNA synthetase N-terminal domain BADSM9389_RS13790 PF16193 AAA C-terminal domain BADSM9389_RS13790 PF00004 ATPase family associated with various cellular activities (AAA) BADSM9389_RS13790 PF12002 MgsA AAA+ ATPase C terminal BADSM9389_RS13795 PF03548 Outer membrane lipoprotein carrier protein LolA BADSM9389_RS13800 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BADSM9389_RS13800 PF17854 FtsK alpha domain BADSM9389_RS13800 PF01580 FtsK/SpoIIIE family BADSM9389_RS13800 PF09397 Ftsk gamma domain BADSM9389_RS13805 PF01037 Lrp/AsnC ligand binding domain BADSM9389_RS13810 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS13815 PF00005 ABC transporter BADSM9389_RS13815 PF00664 ABC transporter transmembrane region BADSM9389_RS13820 PF00664 ABC transporter transmembrane region BADSM9389_RS13820 PF00005 ABC transporter BADSM9389_RS13825 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BADSM9389_RS13830 PF01176 Translation initiation factor 1A / IF-1 BADSM9389_RS13835 PF00004 ATPase family associated with various cellular activities (AAA) BADSM9389_RS13835 PF07724 AAA domain (Cdc48 subfamily) BADSM9389_RS13835 PF10431 C-terminal, D2-small domain, of ClpB protein BADSM9389_RS13835 PF17871 AAA lid domain BADSM9389_RS13835 PF02861 Clp amino terminal domain, pathogenicity island component BADSM9389_RS13840 PF02617 ATP-dependent Clp protease adaptor protein ClpS BADSM9389_RS13845 PF00313 'Cold-shock' DNA-binding domain BADSM9389_RS13850 PF12704 MacB-like periplasmic core domain BADSM9389_RS13850 PF02687 FtsX-like permease family BADSM9389_RS13850 PF00005 ABC transporter BADSM9389_RS13855 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS13860 PF04393 Protein of unknown function (DUF535) BADSM9389_RS13865 PF11398 Protein of unknown function (DUF2813) BADSM9389_RS13870 PF00230 Major intrinsic protein BADSM9389_RS13875 PF03956 Lysine exporter LysO BADSM9389_RS13880 PF03063 Prismane/CO dehydrogenase family BADSM9389_RS13885 PF00175 Oxidoreductase NAD-binding domain BADSM9389_RS13885 PF00970 Oxidoreductase FAD-binding domain BADSM9389_RS13885 PF00111 2Fe-2S iron-sulfur cluster binding domain BADSM9389_RS13890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BADSM9389_RS13890 PF00205 Thiamine pyrophosphate enzyme, central domain BADSM9389_RS13890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BADSM9389_RS13895 PF01212 Beta-eliminating lyase BADSM9389_RS13900 PF11066 Protein of unknown function (DUF2867) BADSM9389_RS13900 PF13460 NAD(P)H-binding BADSM9389_RS13905 PF01370 NAD dependent epimerase/dehydratase family BADSM9389_RS13910 PF01510 N-acetylmuramoyl-L-alanine amidase BADSM9389_RS13915 PF12883 Protein of unknown function (DUF3828) BADSM9389_RS13920 PF00005 ABC transporter BADSM9389_RS13925 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS13930 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS13935 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS13940 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS13950 PF05958 tRNA (Uracil-5-)-methyltransferase BADSM9389_RS13955 PF10767 Protein of unknown function (DUF2593) BADSM9389_RS13960 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS13965 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS13970 PF00005 ABC transporter BADSM9389_RS13970 PF08402 TOBE domain BADSM9389_RS13975 PF13416 Bacterial extracellular solute-binding protein BADSM9389_RS13980 PF10722 Putative bacterial sensory transduction regulator BADSM9389_RS13985 PF08443 RimK-like ATP-grasp domain BADSM9389_RS13985 PF18030 RimK PreATP-grasp domain BADSM9389_RS13990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS13990 PF03466 LysR substrate binding domain BADSM9389_RS13995 PF03825 Nucleoside H+ symporter BADSM9389_RS14000 PF01048 Phosphorylase superfamily BADSM9389_RS14005 PF00881 Nitroreductase family BADSM9389_RS14010 PF07214 Protein of unknown function (DUF1418) BADSM9389_RS14015 PF00462 Glutaredoxin BADSM9389_RS14020 PF11045 Putative inner membrane protein of Enterobacteriaceae BADSM9389_RS14025 PF02080 TrkA-C domain BADSM9389_RS14025 PF06826 Predicted Permease Membrane Region BADSM9389_RS14035 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS14040 PF07690 Major Facilitator Superfamily BADSM9389_RS14050 PF03600 Citrate transporter BADSM9389_RS14055 PF01325 Iron dependent repressor, N-terminal DNA binding domain BADSM9389_RS14055 PF02742 Iron dependent repressor, metal binding and dimerisation domain BADSM9389_RS14065 PF00884 Sulfatase BADSM9389_RS14070 PF13505 Outer membrane protein beta-barrel domain BADSM9389_RS14075 PF00892 EamA-like transporter family BADSM9389_RS14080 PF00210 Ferritin-like domain BADSM9389_RS14085 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS14090 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS14095 PF00005 ABC transporter BADSM9389_RS14100 PF00924 Mechanosensitive ion channel BADSM9389_RS14105 PF05971 RNA methyltransferase BADSM9389_RS14110 PF01613 Flavin reductase like domain BADSM9389_RS14115 PF07338 Protein of unknown function (DUF1471) BADSM9389_RS14120 PF03480 Bacterial extracellular solute-binding protein, family 7 BADSM9389_RS14125 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BADSM9389_RS14130 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BADSM9389_RS14135 PF02378 Phosphotransferase system, EIIC BADSM9389_RS14140 PF01112 Asparaginase BADSM9389_RS14145 PF00883 Cytosol aminopeptidase family, catalytic domain BADSM9389_RS14145 PF02789 Cytosol aminopeptidase family, N-terminal domain BADSM9389_RS14150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS14160 PF07338 Protein of unknown function (DUF1471) BADSM9389_RS14165 PF02885 Glycosyl transferase family, helical bundle domain BADSM9389_RS14170 PF06733 DEAD_2 BADSM9389_RS14170 PF13307 Helicase C-terminal domain BADSM9389_RS14175 PF08007 Cupin superfamily protein BADSM9389_RS14180 PF13411 MerR HTH family regulatory protein BADSM9389_RS14185 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS14190 PF00005 ABC transporter BADSM9389_RS14195 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS14200 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BADSM9389_RS14205 PF04717 Type VI secretion system, phage-baseplate injector BADSM9389_RS14210 PF00182 Chitinase class I BADSM9389_RS14230 PF01915 Glycosyl hydrolase family 3 C-terminal domain BADSM9389_RS14230 PF00933 Glycosyl hydrolase family 3 N terminal domain BADSM9389_RS14230 PF14310 Fibronectin type III-like domain BADSM9389_RS14235 PF01565 FAD binding domain BADSM9389_RS14235 PF09330 D-lactate dehydrogenase, membrane binding BADSM9389_RS14245 PF00768 D-alanyl-D-alanine carboxypeptidase BADSM9389_RS14250 PF04893 Yip1 domain BADSM9389_RS14260 PF09335 SNARE associated Golgi protein BADSM9389_RS14270 PF02321 Outer membrane efflux protein BADSM9389_RS14275 PF12833 Helix-turn-helix domain BADSM9389_RS14275 PF02311 AraC-like ligand binding domain BADSM9389_RS14290 PF02264 LamB porin BADSM9389_RS14290 PF11471 Maltoporin periplasmic N-terminal extension BADSM9389_RS14295 PF08241 Methyltransferase domain BADSM9389_RS14305 PF00753 Metallo-beta-lactamase superfamily BADSM9389_RS14310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS14310 PF03466 LysR substrate binding domain BADSM9389_RS14315 PF00232 Glycosyl hydrolase family 1 BADSM9389_RS14320 PF02378 Phosphotransferase system, EIIC BADSM9389_RS14320 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BADSM9389_RS14320 PF00367 phosphotransferase system, EIIB BADSM9389_RS14325 PF00874 PRD domain BADSM9389_RS14325 PF03123 CAT RNA binding domain BADSM9389_RS14330 PF01207 Dihydrouridine synthase (Dus) BADSM9389_RS14335 PF00271 Helicase conserved C-terminal domain BADSM9389_RS14335 PF00270 DEAD/DEAH box helicase BADSM9389_RS14340 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS14340 PF09209 Tetracyclin repressor-like, C-terminal domain BADSM9389_RS14345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS14350 PF00005 ABC transporter BADSM9389_RS14365 PF11076 Putative inner membrane protein YbhQ BADSM9389_RS14370 PF03372 Endonuclease/Exonuclease/phosphatase family BADSM9389_RS14375 PF13091 PLD-like domain BADSM9389_RS14380 PF03706 Lysylphosphatidylglycerol synthase TM region BADSM9389_RS14385 PF01027 Inhibitor of apoptosis-promoting Bax1 BADSM9389_RS14390 PF02391 MoaE protein BADSM9389_RS14395 PF02597 ThiS family BADSM9389_RS14400 PF01967 MoaC family BADSM9389_RS14405 PF00994 Probable molybdopterin binding domain BADSM9389_RS14410 PF04055 Radical SAM superfamily BADSM9389_RS14410 PF06463 Molybdenum Cofactor Synthesis C BADSM9389_RS14415 PF01933 Uncharacterised protein family UPF0052 BADSM9389_RS14420 PF04851 Type III restriction enzyme, res subunit BADSM9389_RS14420 PF00271 Helicase conserved C-terminal domain BADSM9389_RS14420 PF02151 UvrB/uvrC motif BADSM9389_RS14420 PF17757 UvrB interaction domain BADSM9389_RS14420 PF12344 Ultra-violet resistance protein B BADSM9389_RS14425 PF00005 ABC transporter BADSM9389_RS14445 PF08241 Methyltransferase domain BADSM9389_RS14450 PF00155 Aminotransferase class I and II BADSM9389_RS14455 PF06968 Biotin and Thiamin Synthesis associated domain BADSM9389_RS14455 PF04055 Radical SAM superfamily BADSM9389_RS14460 PF00202 Aminotransferase class-III BADSM9389_RS14470 PF01161 Phosphatidylethanolamine-binding protein BADSM9389_RS14475 PF01095 Pectinesterase BADSM9389_RS14480 PF10282 Lactonase, 7-bladed beta-propeller BADSM9389_RS14490 PF03459 TOBE domain BADSM9389_RS14490 PF00005 ABC transporter BADSM9389_RS14495 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS14505 PF00571 CBS domain BADSM9389_RS14505 PF01769 Divalent cation transporter BADSM9389_RS14505 PF03448 MgtE intracellular N domain BADSM9389_RS14510 PF00005 ABC transporter BADSM9389_RS14515 PF13532 2OG-Fe(II) oxygenase superfamily BADSM9389_RS14520 PF12833 Helix-turn-helix domain BADSM9389_RS14520 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BADSM9389_RS14520 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BADSM9389_RS14520 PF02805 Metal binding domain of Ada BADSM9389_RS14525 PF02424 ApbE family BADSM9389_RS14530 PF00267 Gram-negative porin BADSM9389_RS14535 PF01627 Hpt domain BADSM9389_RS14535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS14535 PF16359 RcsD-ABL domain BADSM9389_RS14540 PF00072 Response regulator receiver domain BADSM9389_RS14540 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS14545 PF00072 Response regulator receiver domain BADSM9389_RS14545 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS14545 PF09456 RcsC Alpha-Beta-Loop (ABL) BADSM9389_RS14545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS14555 PF03989 DNA gyrase C-terminal domain, beta-propeller BADSM9389_RS14555 PF00521 DNA gyrase/topoisomerase IV, subunit A BADSM9389_RS14565 PF03477 ATP cone domain BADSM9389_RS14565 PF02867 Ribonucleotide reductase, barrel domain BADSM9389_RS14565 PF00317 Ribonucleotide reductase, all-alpha domain BADSM9389_RS14570 PF00268 Ribonucleotide reductase, small chain BADSM9389_RS14575 PF00111 2Fe-2S iron-sulfur cluster binding domain BADSM9389_RS14580 PF07690 Major Facilitator Superfamily BADSM9389_RS14585 PF01266 FAD dependent oxidoreductase BADSM9389_RS14585 PF04324 BFD-like [2Fe-2S] binding domain BADSM9389_RS14590 PF00890 FAD binding domain BADSM9389_RS14595 PF02754 Cysteine-rich domain BADSM9389_RS14595 PF13183 4Fe-4S dicluster domain BADSM9389_RS14600 PF00994 Probable molybdopterin binding domain BADSM9389_RS14605 PF07437 YfaZ precursor BADSM9389_RS14610 PF08521 Two-component sensor kinase N-terminal BADSM9389_RS14610 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS14610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS14615 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS14615 PF00072 Response regulator receiver domain BADSM9389_RS14630 PF01970 Tripartite tricarboxylate transporter TctA family BADSM9389_RS14635 PF13193 AMP-binding enzyme C-terminal domain BADSM9389_RS14635 PF00501 AMP-binding enzyme BADSM9389_RS14640 PF13378 Enolase C-terminal domain-like BADSM9389_RS14645 PF00378 Enoyl-CoA hydratase/isomerase BADSM9389_RS14650 PF12697 Alpha/beta hydrolase family BADSM9389_RS14655 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BADSM9389_RS14655 PF16582 Middle domain of thiamine pyrophosphate BADSM9389_RS14655 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BADSM9389_RS14660 PF00425 chorismate binding enzyme BADSM9389_RS14665 PF05957 Bacterial protein of unknown function (DUF883) BADSM9389_RS14670 PF10725 Protein of unknown function (DUF2517) BADSM9389_RS14675 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) BADSM9389_RS14680 PF03814 Potassium-transporting ATPase A subunit BADSM9389_RS14690 PF02669 K+-transporting ATPase, c chain BADSM9389_RS14695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS14695 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS14695 PF13493 Domain of unknown function (DUF4118) BADSM9389_RS14695 PF02702 Osmosensitive K+ channel His kinase sensor domain BADSM9389_RS14695 PF13492 GAF domain BADSM9389_RS14700 PF00072 Response regulator receiver domain BADSM9389_RS14700 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS14705 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BADSM9389_RS14705 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BADSM9389_RS14705 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BADSM9389_RS14705 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BADSM9389_RS14710 PF17206 SeqA protein N-terminal domain BADSM9389_RS14710 PF03925 SeqA protein C-terminal domain BADSM9389_RS14715 PF12697 Alpha/beta hydrolase family BADSM9389_RS14720 PF01402 Ribbon-helix-helix protein, copG family BADSM9389_RS14725 PF00258 Flavodoxin BADSM9389_RS14730 PF01475 Ferric uptake regulator family BADSM9389_RS14735 PF13982 YbfN-like lipoprotein BADSM9389_RS14740 PF03573 outer membrane porin, OprD family BADSM9389_RS14745 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BADSM9389_RS14745 PF00749 tRNA synthetases class I (E and Q), catalytic domain BADSM9389_RS14750 PF02378 Phosphotransferase system, EIIC BADSM9389_RS14750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BADSM9389_RS14750 PF00367 phosphotransferase system, EIIB BADSM9389_RS14755 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BADSM9389_RS14760 PF01979 Amidohydrolase family BADSM9389_RS14765 PF01047 MarR family BADSM9389_RS14765 PF00480 ROK family BADSM9389_RS14770 PF13344 Haloacid dehalogenase-like hydrolase BADSM9389_RS14775 PF13537 Glutamine amidotransferase domain BADSM9389_RS14775 PF00733 Asparagine synthase BADSM9389_RS14810 PF01494 FAD binding domain BADSM9389_RS14815 PF01938 TRAM domain BADSM9389_RS14815 PF04055 Radical SAM superfamily BADSM9389_RS14815 PF00919 Uncharacterized protein family UPF0004 BADSM9389_RS14820 PF02562 PhoH-like protein BADSM9389_RS14825 PF02130 Uncharacterized protein family UPF0054 BADSM9389_RS14830 PF00571 CBS domain BADSM9389_RS14830 PF03471 Transporter associated domain BADSM9389_RS14835 PF00795 Carbon-nitrogen hydrolase BADSM9389_RS14840 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS14845 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS14850 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS14855 PF00005 ABC transporter BADSM9389_RS14865 PF07295 Zinc-ribbon containing domain BADSM9389_RS14870 PF13603 Leucyl-tRNA synthetase, Domain 2 BADSM9389_RS14870 PF00133 tRNA synthetases class I (I, L, M and V) BADSM9389_RS14870 PF08264 Anticodon-binding domain of tRNA BADSM9389_RS14875 PF04390 Lipopolysaccharide-assembly BADSM9389_RS14880 PF06144 DNA polymerase III, delta subunit BADSM9389_RS14880 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BADSM9389_RS14885 PF01467 Cytidylyltransferase-like BADSM9389_RS14890 PF00155 Aminotransferase class I and II BADSM9389_RS14895 PF00300 Histidine phosphatase superfamily (branch 1) BADSM9389_RS14905 PF02590 Predicted SPOUT methyltransferase BADSM9389_RS14910 PF00905 Penicillin binding protein transpeptidase domain BADSM9389_RS14910 PF03717 Penicillin-binding Protein dimerisation domain BADSM9389_RS14915 PF01098 Cell cycle protein BADSM9389_RS14920 PF05036 Sporulation related domain BADSM9389_RS14920 PF03330 Lytic transglycolase BADSM9389_RS14925 PF07943 Penicillin-binding protein 5, C-terminal domain BADSM9389_RS14925 PF00768 D-alanyl-D-alanine carboxypeptidase BADSM9389_RS14930 PF04359 Protein of unknown function (DUF493) BADSM9389_RS14935 PF03099 Biotin/lipoate A/B protein ligase family BADSM9389_RS14940 PF03466 LysR substrate binding domain BADSM9389_RS14940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS14945 PF04055 Radical SAM superfamily BADSM9389_RS14945 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BADSM9389_RS14950 PF02416 mttA/Hcf106 family BADSM9389_RS14955 PF00795 Carbon-nitrogen hydrolase BADSM9389_RS14960 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BADSM9389_RS14965 PF00313 'Cold-shock' DNA-binding domain BADSM9389_RS14970 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP BADSM9389_RS14975 PF00873 AcrB/AcrD/AcrF family BADSM9389_RS14980 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS14980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS14990 PF11604 Copper binding periplasmic protein CusF BADSM9389_RS15000 PF03606 C4-dicarboxylate anaerobic carrier BADSM9389_RS15005 PF12431 Transcriptional regulator BADSM9389_RS15005 PF00072 Response regulator receiver domain BADSM9389_RS15010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS15010 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BADSM9389_RS15010 PF17203 Single cache domain 3 BADSM9389_RS15010 PF00989 PAS fold BADSM9389_RS15015 PF08218 Citrate lyase ligase C-terminal domain BADSM9389_RS15020 PF06857 Malonate decarboxylase delta subunit (MdcD) BADSM9389_RS15025 PF03328 HpcH/HpaI aldolase/citrate lyase family BADSM9389_RS15030 PF04223 Citrate lyase, alpha subunit (CitF) BADSM9389_RS15035 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase BADSM9389_RS15040 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BADSM9389_RS15045 PF00939 Sodium:sulfate symporter transmembrane region BADSM9389_RS15050 PF00445 Ribonuclease T2 family BADSM9389_RS15065 PF00561 alpha/beta hydrolase fold BADSM9389_RS15070 PF02447 GntP family permease BADSM9389_RS15075 PF01272 Transcription elongation factor, GreA/GreB, C-term BADSM9389_RS15075 PF14760 Rnk N-terminus BADSM9389_RS15080 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS15080 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BADSM9389_RS15085 PF02378 Phosphotransferase system, EIIC BADSM9389_RS15085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BADSM9389_RS15085 PF00367 phosphotransferase system, EIIB BADSM9389_RS15090 PF04307 LexA-binding, inner membrane-associated putative hydrolase BADSM9389_RS15100 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BADSM9389_RS15100 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BADSM9389_RS15110 PF02774 Semialdehyde dehydrogenase, dimerisation domain BADSM9389_RS15110 PF01118 Semialdehyde dehydrogenase, NAD binding domain BADSM9389_RS15115 PF07690 Major Facilitator Superfamily BADSM9389_RS15135 PF00419 Fimbrial protein BADSM9389_RS15140 PF13953 PapC C-terminal domain BADSM9389_RS15140 PF13954 PapC N-terminal domain BADSM9389_RS15140 PF00577 Outer membrane usher protein BADSM9389_RS15145 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS15145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS15150 PF00419 Fimbrial protein BADSM9389_RS15155 PF15977 Winged helix-turn-helix DNA binding BADSM9389_RS15160 PF15977 Winged helix-turn-helix DNA binding BADSM9389_RS15170 PF00155 Aminotransferase class I and II BADSM9389_RS15175 PF03553 Na+/H+ antiporter family BADSM9389_RS15180 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS15190 PF01380 SIS domain BADSM9389_RS15190 PF01418 Helix-turn-helix domain, rpiR family BADSM9389_RS15190 PF02685 Glucokinase BADSM9389_RS15195 PF01081 KDPG and KHG aldolase BADSM9389_RS15200 PF05035 2-keto-3-deoxy-galactonokinase BADSM9389_RS15215 PF07969 Amidohydrolase family BADSM9389_RS15230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS15235 PF11975 Family 4 glycosyl hydrolase C-terminal domain BADSM9389_RS15235 PF02056 Family 4 glycosyl hydrolase BADSM9389_RS15240 PF02378 Phosphotransferase system, EIIC BADSM9389_RS15245 PF13454 FAD-NAD(P)-binding BADSM9389_RS15250 PF14602 Hexapeptide repeat of succinyl-transferase BADSM9389_RS15250 PF12464 Maltose acetyltransferase BADSM9389_RS15265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS15265 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS15270 PF02321 Outer membrane efflux protein BADSM9389_RS15275 PF01594 AI-2E family transporter BADSM9389_RS15280 PF07338 Protein of unknown function (DUF1471) BADSM9389_RS15285 PF02386 Cation transport protein BADSM9389_RS15290 PF05161 MOFRL family BADSM9389_RS15290 PF13660 Domain of unknown function (DUF4147) BADSM9389_RS15295 PF00180 Isocitrate/isopropylmalate dehydrogenase BADSM9389_RS15300 PF03466 LysR substrate binding domain BADSM9389_RS15300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS15305 PF07690 Major Facilitator Superfamily BADSM9389_RS15310 PF07690 Major Facilitator Superfamily BADSM9389_RS15315 PF07969 Amidohydrolase family BADSM9389_RS15320 PF00696 Amino acid kinase family BADSM9389_RS15330 PF06545 Protein of unknown function (DUF1116) BADSM9389_RS15335 PF02629 CoA binding domain BADSM9389_RS15335 PF00549 CoA-ligase BADSM9389_RS15340 PF11392 Protein of unknown function (DUF2877) BADSM9389_RS15345 PF12796 Ankyrin repeats (3 copies) BADSM9389_RS15350 PF03466 LysR substrate binding domain BADSM9389_RS15350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS15365 PF03466 LysR substrate binding domain BADSM9389_RS15365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS15375 PF09163 Formate dehydrogenase N, transmembrane BADSM9389_RS15375 PF12800 4Fe-4S binding domain BADSM9389_RS15375 PF13247 4Fe-4S dicluster domain BADSM9389_RS15380 PF01292 Prokaryotic cytochrome b561 BADSM9389_RS15385 PF06643 Protein of unknown function (DUF1158) BADSM9389_RS15390 PF00924 Mechanosensitive ion channel BADSM9389_RS15395 PF04107 Glutamate-cysteine ligase family 2(GCS2) BADSM9389_RS15410 PF08240 Alcohol dehydrogenase GroES-like domain BADSM9389_RS15410 PF00107 Zinc-binding dehydrogenase BADSM9389_RS15425 PF02652 L-lactate permease BADSM9389_RS15430 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS15430 PF07729 FCD domain BADSM9389_RS15435 PF01070 FMN-dependent dehydrogenase BADSM9389_RS15440 PF02566 OsmC-like protein BADSM9389_RS15450 PF04542 Sigma-70 region 2 BADSM9389_RS15450 PF08281 Sigma-70, region 4 BADSM9389_RS15470 PF01842 ACT domain BADSM9389_RS15475 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BADSM9389_RS15475 PF00205 Thiamine pyrophosphate enzyme, central domain BADSM9389_RS15475 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BADSM9389_RS15485 PF02492 CobW/HypB/UreG, nucleotide-binding domain BADSM9389_RS15485 PF07683 Cobalamin synthesis protein cobW C-terminal domain BADSM9389_RS15490 PF04328 Selenoprotein, putative BADSM9389_RS15495 PF02554 Carbon starvation protein CstA BADSM9389_RS15495 PF13722 5TM C-terminal transporter carbon starvation CstA BADSM9389_RS15500 PF03061 Thioesterase superfamily BADSM9389_RS15510 PF00857 Isochorismatase family BADSM9389_RS15510 PF00550 Phosphopantetheine attachment site BADSM9389_RS15515 PF00501 AMP-binding enzyme BADSM9389_RS15515 PF13193 AMP-binding enzyme C-terminal domain BADSM9389_RS15520 PF00425 chorismate binding enzyme BADSM9389_RS15525 PF01497 Periplasmic binding protein BADSM9389_RS15530 PF05977 Transmembrane secretion effector BADSM9389_RS15535 PF01032 FecCD transport family BADSM9389_RS15540 PF01032 FecCD transport family BADSM9389_RS15545 PF00005 ABC transporter BADSM9389_RS15550 PF00501 AMP-binding enzyme BADSM9389_RS15550 PF00975 Thioesterase domain BADSM9389_RS15550 PF00550 Phosphopantetheine attachment site BADSM9389_RS15550 PF00668 Condensation domain BADSM9389_RS15550 PF13193 AMP-binding enzyme C-terminal domain BADSM9389_RS15555 PF03621 MbtH-like protein BADSM9389_RS15560 PF00756 Putative esterase BADSM9389_RS15560 PF11806 Domain of unknown function (DUF3327) BADSM9389_RS15565 PF07715 TonB-dependent Receptor Plug Domain BADSM9389_RS15565 PF00593 TonB dependent receptor BADSM9389_RS15570 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BADSM9389_RS15570 PF01648 4'-phosphopantetheinyl transferase superfamily BADSM9389_RS15575 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BADSM9389_RS15575 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BADSM9389_RS15580 PF00884 Sulfatase BADSM9389_RS15585 PF00578 AhpC/TSA family BADSM9389_RS15585 PF10417 C-terminal domain of 1-Cys peroxiredoxin BADSM9389_RS15590 PF13192 Thioredoxin domain BADSM9389_RS15590 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS15600 PF15977 Winged helix-turn-helix DNA binding BADSM9389_RS15605 PF09190 DALR domain BADSM9389_RS15605 PF01406 tRNA synthetases class I (C) catalytic domain BADSM9389_RS15610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BADSM9389_RS15615 PF12850 Calcineurin-like phosphoesterase superfamily domain BADSM9389_RS15620 PF00731 AIR carboxylase BADSM9389_RS15625 PF02222 ATP-grasp domain BADSM9389_RS15625 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BADSM9389_RS15630 PF00581 Rhodanese-like domain BADSM9389_RS15635 PF00696 Amino acid kinase family BADSM9389_RS15640 PF11392 Protein of unknown function (DUF2877) BADSM9389_RS15645 PF06545 Protein of unknown function (DUF1116) BADSM9389_RS15650 PF02629 CoA binding domain BADSM9389_RS15650 PF00549 CoA-ligase BADSM9389_RS15655 PF02615 Malate/L-lactate dehydrogenase BADSM9389_RS15660 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS15665 PF07883 Cupin domain BADSM9389_RS15665 PF05899 Protein of unknown function (DUF861) BADSM9389_RS15670 PF02595 Glycerate kinase family BADSM9389_RS15675 PF00860 Permease family BADSM9389_RS15680 PF01979 Amidohydrolase family BADSM9389_RS15685 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BADSM9389_RS15690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BADSM9389_RS15690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BADSM9389_RS15695 PF01261 Xylose isomerase-like TIM barrel BADSM9389_RS15700 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BADSM9389_RS15700 PF00205 Thiamine pyrophosphate enzyme, central domain BADSM9389_RS15700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BADSM9389_RS15705 PF01614 Bacterial transcriptional regulator BADSM9389_RS15705 PF09339 IclR helix-turn-helix domain BADSM9389_RS15710 PF04115 Ureidoglycolate lyase BADSM9389_RS15715 PF03466 LysR substrate binding domain BADSM9389_RS15715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS15725 PF00005 ABC transporter BADSM9389_RS15730 PF13472 GDSL-like Lipase/Acylhydrolase family BADSM9389_RS15735 PF00106 short chain dehydrogenase BADSM9389_RS15740 PF00085 Thioredoxin BADSM9389_RS15745 PF01145 SPFH domain / Band 7 family BADSM9389_RS15745 PF16200 C-terminal region of band_7 BADSM9389_RS15750 PF01957 NfeD-like C-terminal, partner-binding BADSM9389_RS15755 PF04717 Type VI secretion system, phage-baseplate injector BADSM9389_RS15770 PF13411 MerR HTH family regulatory protein BADSM9389_RS15775 PF12951 Passenger-associated-transport-repeat BADSM9389_RS15780 PF00403 Heavy-metal-associated domain BADSM9389_RS15785 PF01963 TraB family BADSM9389_RS15790 PF04073 Aminoacyl-tRNA editing domain BADSM9389_RS15795 PF06445 GyrI-like small molecule binding domain BADSM9389_RS15800 PF02872 5'-nucleotidase, C-terminal domain BADSM9389_RS15800 PF00149 Calcineurin-like phosphoesterase BADSM9389_RS15805 PF07690 Major Facilitator Superfamily BADSM9389_RS15810 PF02254 TrkA-N domain BADSM9389_RS15810 PF00999 Sodium/hydrogen exchanger family BADSM9389_RS15815 PF00294 pfkB family carbohydrate kinase BADSM9389_RS15820 PF00762 Ferrochelatase BADSM9389_RS15825 PF05191 Adenylate kinase, active site lid BADSM9389_RS15830 PF00183 Hsp90 protein BADSM9389_RS15830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS15835 PF13662 Toprim domain BADSM9389_RS15835 PF02132 RecR protein BADSM9389_RS15840 PF00857 Isochorismatase family BADSM9389_RS15845 PF05726 Pirin C-terminal cupin domain BADSM9389_RS15845 PF02678 Pirin BADSM9389_RS15850 PF03466 LysR substrate binding domain BADSM9389_RS15850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS15855 PF02575 YbaB/EbfC DNA-binding family BADSM9389_RS15860 PF12169 DNA polymerase III subunits gamma and tau domain III BADSM9389_RS15860 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BADSM9389_RS15860 PF12170 DNA polymerase III tau subunit V interacting with alpha BADSM9389_RS15865 PF00156 Phosphoribosyl transferase domain BADSM9389_RS15870 PF04304 Protein of unknown function (DUF454) BADSM9389_RS15880 PF10689 Protein of unknown function (DUF2496) BADSM9389_RS15885 PF00924 Mechanosensitive ion channel BADSM9389_RS15885 PF12795 Mechanosensitive ion channel porin domain BADSM9389_RS15885 PF12794 Mechanosensitive ion channel inner membrane domain 1 BADSM9389_RS15890 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS15890 PF08361 MAATS-type transcriptional repressor, C-terminal region BADSM9389_RS15895 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS15895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS15900 PF00873 AcrB/AcrD/AcrF family BADSM9389_RS15905 PF10757 Biofilm formation regulator YbaJ BADSM9389_RS15910 PF05321 Haemolysin expression modulating protein BADSM9389_RS15915 PF14602 Hexapeptide repeat of succinyl-transferase BADSM9389_RS15915 PF12464 Maltose acetyltransferase BADSM9389_RS15920 PF10777 Inner membrane protein YlaC BADSM9389_RS15925 PF00444 Ribosomal protein L36 BADSM9389_RS15935 PF03180 NLPA lipoprotein BADSM9389_RS15940 PF00005 ABC transporter BADSM9389_RS15940 PF09383 NIL domain BADSM9389_RS15945 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS15950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BADSM9389_RS15950 PF02378 Phosphotransferase system, EIIC BADSM9389_RS15950 PF00367 phosphotransferase system, EIIB BADSM9389_RS15955 PF13378 Enolase C-terminal domain-like BADSM9389_RS15955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BADSM9389_RS15960 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS15960 PF07702 UTRA domain BADSM9389_RS15965 PF12792 CSS motif domain associated with EAL BADSM9389_RS15965 PF00563 EAL domain BADSM9389_RS15970 PF01590 GAF domain BADSM9389_RS15970 PF00158 Sigma-54 interaction domain BADSM9389_RS15975 PF00258 Flavodoxin BADSM9389_RS15975 PF00753 Metallo-beta-lactamase superfamily BADSM9389_RS15975 PF00301 Rubredoxin BADSM9389_RS15980 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS15980 PF18113 Rubredoxin binding C-terminal domain BADSM9389_RS15985 PF07237 Protein of unknown function (DUF1428) BADSM9389_RS16010 PF14863 Alkyl sulfatase dimerisation BADSM9389_RS16010 PF14864 Alkyl sulfatase C-terminal BADSM9389_RS16010 PF00753 Metallo-beta-lactamase superfamily BADSM9389_RS16020 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BADSM9389_RS16025 PF09619 Type III secretion system lipoprotein chaperone (YscW) BADSM9389_RS16035 PF00909 Ammonium Transporter Family BADSM9389_RS16040 PF00543 Nitrogen regulatory protein P-II BADSM9389_RS16045 PF00664 ABC transporter transmembrane region BADSM9389_RS16045 PF00005 ABC transporter BADSM9389_RS16050 PF00005 ABC transporter BADSM9389_RS16050 PF00664 ABC transporter transmembrane region BADSM9389_RS16055 PF13404 AsnC-type helix-turn-helix domain BADSM9389_RS16055 PF01037 Lrp/AsnC ligand binding domain BADSM9389_RS16060 PF00291 Pyridoxal-phosphate dependent enzyme BADSM9389_RS16070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BADSM9389_RS16070 PF12793 Sugar transport-related sRNA regulator N-term BADSM9389_RS16075 PF06508 Queuosine biosynthesis protein QueC BADSM9389_RS16090 PF13145 PPIC-type PPIASE domain BADSM9389_RS16095 PF00216 Bacterial DNA-binding protein BADSM9389_RS16100 PF00004 ATPase family associated with various cellular activities (AAA) BADSM9389_RS16100 PF05362 Lon protease (S16) C-terminal proteolytic domain BADSM9389_RS16100 PF02190 ATP-dependent protease La (LON) substrate-binding domain BADSM9389_RS16105 PF10431 C-terminal, D2-small domain, of ClpB protein BADSM9389_RS16105 PF06689 ClpX C4-type zinc finger BADSM9389_RS16105 PF07724 AAA domain (Cdc48 subfamily) BADSM9389_RS16110 PF00574 Clp protease BADSM9389_RS16115 PF05697 Bacterial trigger factor protein (TF) BADSM9389_RS16115 PF05698 Bacterial trigger factor protein (TF) C-terminus BADSM9389_RS16115 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BADSM9389_RS16120 PF01722 BolA-like protein BADSM9389_RS16125 PF03923 Uncharacterized lipoprotein BADSM9389_RS16125 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BADSM9389_RS16130 PF07690 Major Facilitator Superfamily BADSM9389_RS16135 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BADSM9389_RS16135 PF06481 COX Aromatic Rich Motif BADSM9389_RS16140 PF00115 Cytochrome C and Quinol oxidase polypeptide I BADSM9389_RS16145 PF00510 Cytochrome c oxidase subunit III BADSM9389_RS16150 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BADSM9389_RS16155 PF01040 UbiA prenyltransferase family BADSM9389_RS16160 PF07690 Major Facilitator Superfamily BADSM9389_RS16165 PF04461 Protein of unknown function (DUF520) BADSM9389_RS16170 PF02558 Ketopantoate reductase PanE/ApbA BADSM9389_RS16170 PF08546 Ketopantoate reductase PanE/ApbA C terminal BADSM9389_RS16175 PF01965 DJ-1/PfpI family BADSM9389_RS16180 PF02926 THUMP domain BADSM9389_RS16180 PF02568 Thiamine biosynthesis protein (ThiI) BADSM9389_RS16185 PF02609 Exonuclease VII small subunit BADSM9389_RS16190 PF00348 Polyprenyl synthetase BADSM9389_RS16195 PF02780 Transketolase, C-terminal domain BADSM9389_RS16195 PF02779 Transketolase, pyrimidine binding domain BADSM9389_RS16195 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BADSM9389_RS16200 PF00248 Aldo/keto reductase family BADSM9389_RS16205 PF04608 Phosphatidylglycerophosphatase A BADSM9389_RS16210 PF02769 AIR synthase related protein, C-terminal domain BADSM9389_RS16210 PF00586 AIR synthase related protein, N-terminal domain BADSM9389_RS16215 PF01029 NusB family BADSM9389_RS16220 PF00885 6,7-dimethyl-8-ribityllumazine synthase BADSM9389_RS16225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BADSM9389_RS16225 PF01872 RibD C-terminal domain BADSM9389_RS16230 PF03477 ATP cone domain BADSM9389_RS16235 PF11622 Protein of unknown function (DUF3251) BADSM9389_RS16240 PF03502 Nucleoside-specific channel-forming protein, Tsx BADSM9389_RS16245 PF01316 Arginine repressor, DNA binding domain BADSM9389_RS16245 PF02863 Arginine repressor, C-terminal domain BADSM9389_RS16255 PF02355 Protein export membrane protein BADSM9389_RS16255 PF07549 SecD/SecF GG Motif BADSM9389_RS16260 PF07549 SecD/SecF GG Motif BADSM9389_RS16260 PF13721 SecD export protein N-terminal TM region BADSM9389_RS16260 PF02355 Protein export membrane protein BADSM9389_RS16265 PF02699 Preprotein translocase subunit BADSM9389_RS16270 PF01702 Queuine tRNA-ribosyltransferase BADSM9389_RS16275 PF02547 Queuosine biosynthesis protein BADSM9389_RS16280 PF04336 Acyl carrier protein phosphodiesterase BADSM9389_RS16285 PF00578 AhpC/TSA family BADSM9389_RS16285 PF10417 C-terminal domain of 1-Cys peroxiredoxin BADSM9389_RS16290 PF07969 Amidohydrolase family BADSM9389_RS16300 PF00857 Isochorismatase family BADSM9389_RS16305 PF02903 Alpha amylase, N-terminal ig-like domain BADSM9389_RS16305 PF00128 Alpha amylase, catalytic domain BADSM9389_RS16315 PF00324 Amino acid permease BADSM9389_RS16320 PF05525 Branched-chain amino acid transport protein BADSM9389_RS16325 PF00989 PAS fold BADSM9389_RS16325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS16325 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS16325 PF11808 Phosphate regulon sensor protein PhoR BADSM9389_RS16330 PF00072 Response regulator receiver domain BADSM9389_RS16330 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS16335 PF12320 Type 5 capsule protein repressor C-terminal domain BADSM9389_RS16335 PF00149 Calcineurin-like phosphoesterase BADSM9389_RS16340 PF13476 AAA domain BADSM9389_RS16360 PF04717 Type VI secretion system, phage-baseplate injector BADSM9389_RS16365 PF00480 ROK family BADSM9389_RS16370 PF04381 Putative exonuclease, RdgC BADSM9389_RS16375 PF06865 Pyrimidine/purine nucleoside phosphorylase BADSM9389_RS16380 PF07302 AroM protein BADSM9389_RS16385 PF16362 YaiA protein BADSM9389_RS16390 PF01202 Shikimate kinase BADSM9389_RS16395 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BADSM9389_RS16400 PF03807 NADP oxidoreductase coenzyme F420-dependent BADSM9389_RS16400 PF14748 Pyrroline-5-carboxylate reductase dimerisation BADSM9389_RS16405 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS16405 PF05230 MASE2 domain BADSM9389_RS16410 PF07769 psiF repeat BADSM9389_RS16415 PF10796 Sigma-S stabilisation anti-adaptor protein BADSM9389_RS16420 PF07690 Major Facilitator Superfamily BADSM9389_RS16430 PF01820 D-ala D-ala ligase N-terminus BADSM9389_RS16430 PF07478 D-ala D-ala ligase C-terminus BADSM9389_RS16435 PF10953 Protein of unknown function (DUF2754) BADSM9389_RS16440 PF10954 Protein of unknown function (DUF2755) BADSM9389_RS16445 PF07759 Protein of unknown function (DUF1615) BADSM9389_RS16450 PF01047 MarR family BADSM9389_RS16455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS16455 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS16460 PF07690 Major Facilitator Superfamily BADSM9389_RS16465 PF05992 SbmA/BacA-like family BADSM9389_RS16470 PF00857 Isochorismatase family BADSM9389_RS16475 PF03279 Bacterial lipid A biosynthesis acyltransferase BADSM9389_RS16480 PF00144 Beta-lactamase BADSM9389_RS16485 PF15977 Winged helix-turn-helix DNA binding BADSM9389_RS16490 PF03797 Autotransporter beta-domain BADSM9389_RS16495 PF00171 Aldehyde dehydrogenase family BADSM9389_RS16500 PF00696 Amino acid kinase family BADSM9389_RS16500 PF01472 PUA domain BADSM9389_RS16505 PF00267 Gram-negative porin BADSM9389_RS16510 PF07417 Sigma factor-binding transcriptional regulator Crl BADSM9389_RS16515 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) BADSM9389_RS16520 PF00156 Phosphoribosyl transferase domain BADSM9389_RS16525 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS16525 PF07687 Peptidase dimerisation domain BADSM9389_RS16530 PF11798 IMS family HHH motif BADSM9389_RS16530 PF00817 impB/mucB/samB family BADSM9389_RS16530 PF11799 impB/mucB/samB family C-terminal domain BADSM9389_RS16535 PF04400 (Na+)-NQR maturation NqrM BADSM9389_RS16540 PF00111 2Fe-2S iron-sulfur cluster binding domain BADSM9389_RS16540 PF00175 Oxidoreductase NAD-binding domain BADSM9389_RS16540 PF00970 Oxidoreductase FAD-binding domain BADSM9389_RS16545 PF02508 Rnf-Nqr subunit, membrane protein BADSM9389_RS16550 PF02508 Rnf-Nqr subunit, membrane protein BADSM9389_RS16555 PF04205 FMN-binding domain BADSM9389_RS16560 PF03116 NQR2, RnfD, RnfE family BADSM9389_RS16565 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BADSM9389_RS16565 PF11973 NQRA C-terminal domain BADSM9389_RS16570 PF03734 L,D-transpeptidase catalytic domain BADSM9389_RS16575 PF13230 Glutamine amidotransferases class-II BADSM9389_RS16580 PF13580 SIS domain BADSM9389_RS16585 PF02770 Acyl-CoA dehydrogenase, middle domain BADSM9389_RS16585 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BADSM9389_RS16585 PF09317 Domain of unknown function (DUF1974) BADSM9389_RS16585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BADSM9389_RS16590 PF00795 Carbon-nitrogen hydrolase BADSM9389_RS16595 PF00576 HIUase/Transthyretin family BADSM9389_RS16600 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS16600 PF07687 Peptidase dimerisation domain BADSM9389_RS16605 PF00266 Aminotransferase class-V BADSM9389_RS16625 PF01425 Amidase BADSM9389_RS16640 PF01177 Asp/Glu/Hydantoin racemase BADSM9389_RS16645 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BADSM9389_RS16655 PF05638 Type VI secretion system effector, Hcp BADSM9389_RS16705 PF10431 C-terminal, D2-small domain, of ClpB protein BADSM9389_RS16705 PF17871 AAA lid domain BADSM9389_RS16705 PF07724 AAA domain (Cdc48 subfamily) BADSM9389_RS16705 PF00004 ATPase family associated with various cellular activities (AAA) BADSM9389_RS16730 PF05638 Type VI secretion system effector, Hcp BADSM9389_RS16755 PF00929 Exonuclease BADSM9389_RS16760 PF00075 RNase H BADSM9389_RS16765 PF08241 Methyltransferase domain BADSM9389_RS16770 PF16123 Hydroxyacylglutathione hydrolase C-terminus BADSM9389_RS16770 PF00753 Metallo-beta-lactamase superfamily BADSM9389_RS16775 PF01476 LysM domain BADSM9389_RS16775 PF01464 Transglycosylase SLT domain BADSM9389_RS16780 PF08241 Methyltransferase domain BADSM9389_RS16785 PF03372 Endonuclease/Exonuclease/phosphatase family BADSM9389_RS16790 PF07690 Major Facilitator Superfamily BADSM9389_RS16795 PF03466 LysR substrate binding domain BADSM9389_RS16795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS16800 PF00248 Aldo/keto reductase family BADSM9389_RS16835 PF09383 NIL domain BADSM9389_RS16835 PF00005 ABC transporter BADSM9389_RS16840 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS16845 PF03180 NLPA lipoprotein BADSM9389_RS16850 PF16358 RcsF lipoprotein BADSM9389_RS16855 PF18389 TrmO C-terminal domain BADSM9389_RS16855 PF01980 tRNA-methyltransferase O BADSM9389_RS16860 PF03129 Anticodon binding domain BADSM9389_RS16860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BADSM9389_RS16860 PF04073 Aminoacyl-tRNA editing domain BADSM9389_RS16865 PF17185 NlpE C-terminal OB domain BADSM9389_RS16865 PF04170 NlpE N-terminal domain BADSM9389_RS16870 PF00472 RF-1 domain BADSM9389_RS16875 PF07152 YaeQ protein BADSM9389_RS16880 PF06786 Uncharacterised protein family (UPF0253) BADSM9389_RS16885 PF07073 Modulator of Rho-dependent transcription termination (ROF) BADSM9389_RS16890 PF00034 Cytochrome c BADSM9389_RS16895 PF01171 PP-loop family BADSM9389_RS16895 PF09179 TilS substrate binding domain BADSM9389_RS16895 PF11734 TilS substrate C-terminal domain BADSM9389_RS16900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BADSM9389_RS16910 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BADSM9389_RS16915 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BADSM9389_RS16915 PF01336 OB-fold nucleic acid binding domain BADSM9389_RS16915 PF02811 PHP domain BADSM9389_RS16915 PF14579 Helix-hairpin-helix motif BADSM9389_RS16915 PF07733 Bacterial DNA polymerase III alpha NTPase domain BADSM9389_RS16920 PF01351 Ribonuclease HII BADSM9389_RS16925 PF02684 Lipid-A-disaccharide synthetase BADSM9389_RS16930 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS16930 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BADSM9389_RS16935 PF07977 FabA-like domain BADSM9389_RS16940 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS16940 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BADSM9389_RS16945 PF03938 Outer membrane protein (OmpH-like) BADSM9389_RS16950 PF07244 Surface antigen variable number repeat BADSM9389_RS16950 PF01103 Surface antigen BADSM9389_RS16955 PF02163 Peptidase family M50 BADSM9389_RS16955 PF17820 PDZ domain BADSM9389_RS16965 PF01255 Putative undecaprenyl diphosphate synthase BADSM9389_RS16970 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BADSM9389_RS16970 PF13288 DXP reductoisomerase C-terminal domain BADSM9389_RS16970 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BADSM9389_RS16975 PF01765 Ribosome recycling factor BADSM9389_RS16980 PF00696 Amino acid kinase family BADSM9389_RS16985 PF00889 Elongation factor TS BADSM9389_RS16990 PF00318 Ribosomal protein S2 BADSM9389_RS16995 PF00557 Metallopeptidase family M24 BADSM9389_RS17000 PF08335 GlnD PII-uridylyltransferase BADSM9389_RS17000 PF01909 Nucleotidyltransferase domain BADSM9389_RS17000 PF01966 HD domain BADSM9389_RS17000 PF01842 ACT domain BADSM9389_RS17005 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS17005 PF14602 Hexapeptide repeat of succinyl-transferase BADSM9389_RS17005 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BADSM9389_RS17010 PF11944 Protein of unknown function (DUF3461) BADSM9389_RS17015 PF13556 PucR C-terminal helix-turn-helix domain BADSM9389_RS17015 PF05651 Putative sugar diacid recognition BADSM9389_RS17015 PF17853 GGDEF-like domain BADSM9389_RS17020 PF00595 PDZ domain BADSM9389_RS17025 PF01966 HD domain BADSM9389_RS17025 PF13286 Phosphohydrolase-associated domain BADSM9389_RS17030 PF01048 Phosphorylase superfamily BADSM9389_RS17035 PF01497 Periplasmic binding protein BADSM9389_RS17040 PF03458 UPF0126 domain BADSM9389_RS17045 PF01521 Iron-sulphur cluster biosynthesis BADSM9389_RS17050 PF00654 Voltage gated chloride channel BADSM9389_RS17055 PF00202 Aminotransferase class-III BADSM9389_RS17060 PF01032 FecCD transport family BADSM9389_RS17065 PF01497 Periplasmic binding protein BADSM9389_RS17070 PF00005 ABC transporter BADSM9389_RS17075 PF07715 TonB-dependent Receptor Plug Domain BADSM9389_RS17075 PF00593 TonB dependent receptor BADSM9389_RS17080 PF00905 Penicillin binding protein transpeptidase domain BADSM9389_RS17080 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal BADSM9389_RS17080 PF14814 Bifunctional transglycosylase second domain BADSM9389_RS17080 PF00912 Transglycosylase BADSM9389_RS17085 PF04408 Helicase associated domain (HA2) BADSM9389_RS17085 PF00271 Helicase conserved C-terminal domain BADSM9389_RS17085 PF00270 DEAD/DEAH box helicase BADSM9389_RS17085 PF08482 ATP-dependent helicase C-terminal BADSM9389_RS17090 PF02834 LigT like Phosphoesterase BADSM9389_RS17095 PF17746 SfsA N-terminal OB domain BADSM9389_RS17095 PF03749 Sugar fermentation stimulation protein RE domain BADSM9389_RS17100 PF01258 Prokaryotic dksA/traR C4-type zinc finger BADSM9389_RS17105 PF00749 tRNA synthetases class I (E and Q), catalytic domain BADSM9389_RS17110 PF12627 Probable RNA and SrmB- binding site of polymerase A BADSM9389_RS17110 PF12626 Polymerase A arginine-rich C-terminus BADSM9389_RS17110 PF01743 Poly A polymerase head domain BADSM9389_RS17115 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BADSM9389_RS17120 PF02548 Ketopantoate hydroxymethyltransferase BADSM9389_RS17125 PF02569 Pantoate-beta-alanine ligase BADSM9389_RS17130 PF02261 Aspartate decarboxylase BADSM9389_RS17135 PF01522 Polysaccharide deacetylase BADSM9389_RS17140 PF03610 PTS system fructose IIA component BADSM9389_RS17145 PF01061 ABC-2 type transporter BADSM9389_RS17150 PF00005 ABC transporter BADSM9389_RS17155 PF00484 Carbonic anhydrase BADSM9389_RS17160 PF00156 Phosphoribosyl transferase domain BADSM9389_RS17165 PF01011 PQQ enzyme repeat BADSM9389_RS17170 PF07732 Multicopper oxidase BADSM9389_RS17170 PF00394 Multicopper oxidase BADSM9389_RS17170 PF07731 Multicopper oxidase BADSM9389_RS17175 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) BADSM9389_RS17185 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BADSM9389_RS17185 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BADSM9389_RS17190 PF06062 Uncharacterised protein family (UPF0231) BADSM9389_RS17195 PF00330 Aconitase family (aconitate hydratase) BADSM9389_RS17195 PF11791 Aconitate B N-terminal domain BADSM9389_RS17195 PF06434 Aconitate hydratase 2 N-terminus BADSM9389_RS17200 PF11737 Protein of unknown function (DUF3300) BADSM9389_RS17210 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS17210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BADSM9389_RS17215 PF00364 Biotin-requiring enzyme BADSM9389_RS17215 PF02817 e3 binding domain BADSM9389_RS17215 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BADSM9389_RS17220 PF17831 Pyruvate dehydrogenase E1 component middle domain BADSM9389_RS17220 PF00456 Transketolase, thiamine diphosphate binding domain BADSM9389_RS17225 PF07729 FCD domain BADSM9389_RS17225 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS17230 PF00324 Amino acid permease BADSM9389_RS17240 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain BADSM9389_RS17240 PF04616 Glycosyl hydrolases family 43 BADSM9389_RS17250 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BADSM9389_RS17250 PF04616 Glycosyl hydrolases family 43 BADSM9389_RS17255 PF17113 Regulatory signalling modulator protein AmpE BADSM9389_RS17260 PF01510 N-acetylmuramoyl-L-alanine amidase BADSM9389_RS17265 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BADSM9389_RS17265 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BADSM9389_RS17270 PF07963 Prokaryotic N-terminal methylation motif BADSM9389_RS17275 PF00437 Type II/IV secretion system protein BADSM9389_RS17275 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BADSM9389_RS17280 PF00482 Type II secretion system (T2SS), protein F BADSM9389_RS17285 PF00478 IMP dehydrogenase / GMP reductase domain BADSM9389_RS17290 PF01121 Dephospho-CoA kinase BADSM9389_RS17295 PF07072 Cell division protein BADSM9389_RS17300 PF03884 DNA gyrase inhibitor YacG BADSM9389_RS17305 PF00293 NUDIX domain BADSM9389_RS17310 PF02810 SEC-C motif BADSM9389_RS17310 PF07517 SecA DEAD-like domain BADSM9389_RS17310 PF01043 SecA preprotein cross-linking domain BADSM9389_RS17310 PF07516 SecA Wing and Scaffold domain BADSM9389_RS17315 PF06558 Secretion monitor precursor protein (SecM) BADSM9389_RS17325 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BADSM9389_RS17330 PF12327 FtsZ family, C-terminal domain BADSM9389_RS17330 PF00091 Tubulin/FtsZ family, GTPase domain BADSM9389_RS17335 PF02491 SHS2 domain inserted in FTSA BADSM9389_RS17340 PF08478 POTRA domain, FtsQ-type BADSM9389_RS17340 PF03799 Cell division protein FtsQ BADSM9389_RS17345 PF01820 D-ala D-ala ligase N-terminus BADSM9389_RS17345 PF07478 D-ala D-ala ligase C-terminus BADSM9389_RS17350 PF02875 Mur ligase family, glutamate ligase domain BADSM9389_RS17350 PF01225 Mur ligase family, catalytic domain BADSM9389_RS17350 PF08245 Mur ligase middle domain BADSM9389_RS17355 PF04101 Glycosyltransferase family 28 C-terminal domain BADSM9389_RS17355 PF03033 Glycosyltransferase family 28 N-terminal domain BADSM9389_RS17360 PF01098 Cell cycle protein BADSM9389_RS17365 PF02875 Mur ligase family, glutamate ligase domain BADSM9389_RS17365 PF08245 Mur ligase middle domain BADSM9389_RS17370 PF00953 Glycosyl transferase family 4 BADSM9389_RS17370 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BADSM9389_RS17375 PF01225 Mur ligase family, catalytic domain BADSM9389_RS17375 PF02875 Mur ligase family, glutamate ligase domain BADSM9389_RS17375 PF08245 Mur ligase middle domain BADSM9389_RS17380 PF08245 Mur ligase middle domain BADSM9389_RS17380 PF01225 Mur ligase family, catalytic domain BADSM9389_RS17380 PF02875 Mur ligase family, glutamate ligase domain BADSM9389_RS17385 PF03717 Penicillin-binding Protein dimerisation domain BADSM9389_RS17385 PF00905 Penicillin binding protein transpeptidase domain BADSM9389_RS17390 PF04999 Cell division protein FtsL BADSM9389_RS17395 PF01795 MraW methylase family BADSM9389_RS17400 PF02381 MraZ protein, putative antitoxin-like BADSM9389_RS17405 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BADSM9389_RS17405 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS17410 PF10369 Small subunit of acetolactate synthase BADSM9389_RS17415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BADSM9389_RS17415 PF00205 Thiamine pyrophosphate enzyme, central domain BADSM9389_RS17415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BADSM9389_RS17420 PF03466 LysR substrate binding domain BADSM9389_RS17420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS17430 PF08502 LeuA allosteric (dimerisation) domain BADSM9389_RS17430 PF00682 HMGL-like BADSM9389_RS17435 PF00180 Isocitrate/isopropylmalate dehydrogenase BADSM9389_RS17440 PF00330 Aconitase family (aconitate hydratase) BADSM9389_RS17445 PF00694 Aconitase C-terminal domain BADSM9389_RS17450 PF11101 Protein of unknown function (DUF2884) BADSM9389_RS17455 PF04320 Protein with unknown function (DUF469) BADSM9389_RS17460 PF02390 Putative methyltransferase BADSM9389_RS17465 PF10576 Iron-sulfur binding domain of endonuclease III BADSM9389_RS17465 PF00633 Helix-hairpin-helix motif BADSM9389_RS17465 PF00730 HhH-GPD superfamily base excision DNA repair protein BADSM9389_RS17465 PF14815 NUDIX domain BADSM9389_RS17470 PF04362 Bacterial Fe(2+) trafficking BADSM9389_RS17475 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BADSM9389_RS17475 PF01464 Transglycosylase SLT domain BADSM9389_RS17480 PF03825 Nucleoside H+ symporter BADSM9389_RS17485 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BADSM9389_RS17485 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BADSM9389_RS17485 PF01276 Orn/Lys/Arg decarboxylase, major domain BADSM9389_RS17500 PF01979 Amidohydrolase family BADSM9389_RS17510 PF00877 NlpC/P60 family BADSM9389_RS17530 PF00455 DeoR C terminal sensor domain BADSM9389_RS17530 PF08220 DeoR-like helix-turn-helix domain BADSM9389_RS17545 PF02472 Biopolymer transport protein ExbD/TolR BADSM9389_RS17550 PF01618 MotA/TolQ/ExbB proton channel family BADSM9389_RS17555 PF01053 Cys/Met metabolism PLP-dependent enzyme BADSM9389_RS17560 PF09335 SNARE associated Golgi protein BADSM9389_RS17570 PF12833 Helix-turn-helix domain BADSM9389_RS17570 PF06719 AraC-type transcriptional regulator N-terminus BADSM9389_RS17575 PF00465 Iron-containing alcohol dehydrogenase BADSM9389_RS17580 PF00248 Aldo/keto reductase family BADSM9389_RS17585 PF11842 Domain of unknown function (DUF3362) BADSM9389_RS17585 PF04055 Radical SAM superfamily BADSM9389_RS17585 PF08497 Radical SAM N-terminal BADSM9389_RS17590 PF07732 Multicopper oxidase BADSM9389_RS17590 PF00394 Multicopper oxidase BADSM9389_RS17590 PF07731 Multicopper oxidase BADSM9389_RS17595 PF01553 Acyltransferase BADSM9389_RS17600 PF03989 DNA gyrase C-terminal domain, beta-propeller BADSM9389_RS17600 PF00521 DNA gyrase/topoisomerase IV, subunit A BADSM9389_RS17605 PF04076 Bacterial OB fold (BOF) protein BADSM9389_RS17610 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS17610 PF00072 Response regulator receiver domain BADSM9389_RS17615 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS17615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS17615 PF08521 Two-component sensor kinase N-terminal BADSM9389_RS17620 PF02525 Flavodoxin-like fold BADSM9389_RS17625 PF03992 Antibiotic biosynthesis monooxygenase BADSM9389_RS17630 PF03466 LysR substrate binding domain BADSM9389_RS17630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS17640 PF00701 Dihydrodipicolinate synthetase family BADSM9389_RS17645 PF01380 SIS domain BADSM9389_RS17645 PF01418 Helix-turn-helix domain, rpiR family BADSM9389_RS17650 PF04074 YhcH/YjgK/YiaL BADSM9389_RS17655 PF00474 Sodium:solute symporter family BADSM9389_RS17660 PF00480 ROK family BADSM9389_RS17665 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BADSM9389_RS17670 PF00986 DNA gyrase B subunit, carboxyl terminus BADSM9389_RS17670 PF01751 Toprim domain BADSM9389_RS17670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS17670 PF00204 DNA gyrase B BADSM9389_RS17675 PF05728 Uncharacterised protein family (UPF0227) BADSM9389_RS17680 PF00149 Calcineurin-like phosphoesterase BADSM9389_RS17685 PF06853 Protein of unknown function (DUF1249) BADSM9389_RS17690 PF00293 NUDIX domain BADSM9389_RS17695 PF02321 Outer membrane efflux protein BADSM9389_RS17700 PF06693 Protein of unknown function (DUF1190) BADSM9389_RS17705 PF03738 Glutathionylspermidine synthase preATP-grasp BADSM9389_RS17710 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BADSM9389_RS17715 PF02535 ZIP Zinc transporter BADSM9389_RS17720 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BADSM9389_RS17725 PF04380 Membrane fusogenic activity BADSM9389_RS17730 PF01467 Cytidylyltransferase-like BADSM9389_RS17730 PF00294 pfkB family carbohydrate kinase BADSM9389_RS17735 PF08335 GlnD PII-uridylyltransferase BADSM9389_RS17735 PF03710 Glutamate-ammonia ligase adenylyltransferase BADSM9389_RS17740 PF01928 CYTH domain BADSM9389_RS17745 PF08239 Bacterial SH3 domain BADSM9389_RS17750 PF01743 Poly A polymerase head domain BADSM9389_RS17750 PF12627 Probable RNA and SrmB- binding site of polymerase A BADSM9389_RS17750 PF01966 HD domain BADSM9389_RS17755 PF07690 Major Facilitator Superfamily BADSM9389_RS17760 PF00391 PEP-utilising enzyme, mobile domain BADSM9389_RS17760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS17760 PF00381 PTS HPr component phosphorylation site BADSM9389_RS17760 PF05524 PEP-utilising enzyme, N-terminal BADSM9389_RS17760 PF02896 PEP-utilising enzyme, TIM barrel domain BADSM9389_RS17765 PF07748 Glycosyl hydrolases family 38 C-terminal domain BADSM9389_RS17765 PF01074 Glycosyl hydrolases family 38 N-terminal domain BADSM9389_RS17765 PF09261 Alpha mannosidase middle domain BADSM9389_RS17775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS17785 PF02673 Bacitracin resistance protein BacA BADSM9389_RS17790 PF02152 Dihydroneopterin aldolase BADSM9389_RS17795 PF02660 Glycerol-3-phosphate acyltransferase BADSM9389_RS17800 PF00814 Glycoprotease family BADSM9389_RS17805 PF01165 Ribosomal protein S21 BADSM9389_RS17810 PF08275 DNA primase catalytic core, N-terminal domain BADSM9389_RS17810 PF08278 DNA primase DnaG DnaB-binding BADSM9389_RS17810 PF01807 CHC2 zinc finger BADSM9389_RS17810 PF10410 DnaB-helicase binding domain of primase BADSM9389_RS17815 PF04542 Sigma-70 region 2 BADSM9389_RS17815 PF04545 Sigma-70, region 4 BADSM9389_RS17815 PF00140 Sigma-70 factor, region 1.2 BADSM9389_RS17815 PF03979 Sigma-70 factor, region 1.1 BADSM9389_RS17815 PF04546 Sigma-70, non-essential region BADSM9389_RS17815 PF04539 Sigma-70 region 3 BADSM9389_RS17820 PF03167 Uracil DNA glycosylase superfamily BADSM9389_RS17840 PF02086 D12 class N6 adenine-specific DNA methyltransferase BADSM9389_RS17845 PF12961 Domain of unknown function (DUF3850) BADSM9389_RS17870 PF06892 Phage regulatory protein CII (CP76) BADSM9389_RS17880 PF07022 Bacteriophage CI repressor helix-turn-helix domain BADSM9389_RS17880 PF16452 Bacteriophage CI repressor C-terminal domain BADSM9389_RS17890 PF02899 Phage integrase, N-terminal SAM-like domain BADSM9389_RS17890 PF00589 Phage integrase family BADSM9389_RS17905 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS17915 PF07690 Major Facilitator Superfamily BADSM9389_RS17920 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BADSM9389_RS17925 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS17930 PF00005 ABC transporter BADSM9389_RS17935 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BADSM9389_RS18045 PF17762 HTH domain found in ParB protein BADSM9389_RS18045 PF02195 ParB-like nuclease domain BADSM9389_RS18055 PF04851 Type III restriction enzyme, res subunit BADSM9389_RS18055 PF08774 VRR-NUC domain BADSM9389_RS18060 PF18273 Type III R-M EcoP15I C-terminal domain BADSM9389_RS18060 PF01555 DNA methylase BADSM9389_RS18065 PF13356 Arm DNA-binding domain BADSM9389_RS18065 PF00589 Phage integrase family BADSM9389_RS18075 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BADSM9389_RS18080 PF03741 Integral membrane protein TerC family BADSM9389_RS18085 PF00375 Sodium:dicarboxylate symporter family BADSM9389_RS18090 PF10688 Bacterial inner membrane protein BADSM9389_RS18095 PF08666 SAF domain BADSM9389_RS18095 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BADSM9389_RS18100 PF02614 Glucuronate isomerase BADSM9389_RS18105 PF07690 Major Facilitator Superfamily BADSM9389_RS18110 PF07729 FCD domain BADSM9389_RS18110 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS18115 PF09335 SNARE associated Golgi protein BADSM9389_RS18120 PF13721 SecD export protein N-terminal TM region BADSM9389_RS18125 PF06476 Protein of unknown function (DUF1090) BADSM9389_RS18130 PF05957 Bacterial protein of unknown function (DUF883) BADSM9389_RS18135 PF07332 Putative Actinobacterial Holin-X, holin superfamily III BADSM9389_RS18140 PF13997 YqjK-like protein BADSM9389_RS18145 PF07681 DoxX BADSM9389_RS18150 PF13409 Glutathione S-transferase, N-terminal domain BADSM9389_RS18155 PF05656 Protein of unknown function (DUF805) BADSM9389_RS18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS18160 PF03466 LysR substrate binding domain BADSM9389_RS18165 PF17954 Quercetinase C-terminal cupin domain BADSM9389_RS18165 PF02678 Pirin BADSM9389_RS18175 PF03313 Serine dehydratase alpha chain BADSM9389_RS18185 PF02463 RecF/RecN/SMC N terminal domain BADSM9389_RS18195 PF02595 Glycerate kinase family BADSM9389_RS18200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BADSM9389_RS18200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BADSM9389_RS18205 PF03328 HpcH/HpaI aldolase/citrate lyase family BADSM9389_RS18210 PF07690 Major Facilitator Superfamily BADSM9389_RS18215 PF08666 SAF domain BADSM9389_RS18215 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BADSM9389_RS18220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS18220 PF03466 LysR substrate binding domain BADSM9389_RS18225 PF07690 Major Facilitator Superfamily BADSM9389_RS18230 PF00455 DeoR C terminal sensor domain BADSM9389_RS18230 PF08220 DeoR-like helix-turn-helix domain BADSM9389_RS18235 PF08013 Tagatose 6 phosphate kinase BADSM9389_RS18240 PF03830 PTS system sorbose subfamily IIB component BADSM9389_RS18245 PF03609 PTS system sorbose-specific iic component BADSM9389_RS18250 PF03613 PTS system mannose/fructose/sorbose family IID component BADSM9389_RS18255 PF03610 PTS system fructose IIA component BADSM9389_RS18260 PF01979 Amidohydrolase family BADSM9389_RS18265 PF01380 SIS domain BADSM9389_RS18270 PF01116 Fructose-bisphosphate aldolase class-II BADSM9389_RS18285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BADSM9389_RS18290 PF04348 LppC putative lipoprotein BADSM9389_RS18295 PF02021 Uncharacterised protein family UPF0102 BADSM9389_RS18300 PF13580 SIS domain BADSM9389_RS18305 PF04972 BON domain BADSM9389_RS18310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS18310 PF08279 HTH domain BADSM9389_RS18310 PF05043 Mga helix-turn-helix domain BADSM9389_RS18310 PF00874 PRD domain BADSM9389_RS18320 PF07071 KDGP aldolase BADSM9389_RS18325 PF03841 L-seryl-tRNA selenium transferase BADSM9389_RS18330 PF01979 Amidohydrolase family BADSM9389_RS18365 PF13953 PapC C-terminal domain BADSM9389_RS18365 PF00577 Outer membrane usher protein BADSM9389_RS18365 PF13954 PapC N-terminal domain BADSM9389_RS18370 PF02753 Pili assembly chaperone PapD, C-terminal domain BADSM9389_RS18370 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BADSM9389_RS18390 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BADSM9389_RS18400 PF03480 Bacterial extracellular solute-binding protein, family 7 BADSM9389_RS18405 PF03466 LysR substrate binding domain BADSM9389_RS18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS18410 PF00698 Acyl transferase domain BADSM9389_RS18415 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BADSM9389_RS18420 PF03547 Membrane transport protein BADSM9389_RS18430 PF01039 Carboxyl transferase domain BADSM9389_RS18435 PF06857 Malonate decarboxylase delta subunit (MdcD) BADSM9389_RS18440 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BADSM9389_RS18445 PF16957 Malonate decarboxylase, alpha subunit, transporter BADSM9389_RS18455 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ BADSM9389_RS18465 PF07361 Cytochrome b562 BADSM9389_RS18470 PF01523 Putative modulator of DNA gyrase BADSM9389_RS18475 PF04751 Protein of unknown function (DUF615) BADSM9389_RS18480 PF01225 Mur ligase family, catalytic domain BADSM9389_RS18480 PF08245 Mur ligase middle domain BADSM9389_RS18480 PF02875 Mur ligase family, glutamate ligase domain BADSM9389_RS18485 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BADSM9389_RS18490 PF00672 HAMP domain BADSM9389_RS18490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BADSM9389_RS18490 PF02203 Tar ligand binding domain homologue BADSM9389_RS18495 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS18500 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS18505 PF00005 ABC transporter BADSM9389_RS18510 PF13407 Periplasmic binding protein domain BADSM9389_RS18515 PF00719 Inorganic pyrophosphatase BADSM9389_RS18520 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BADSM9389_RS18525 PF04357 TamB, inner membrane protein subunit of TAM complex BADSM9389_RS18530 PF01103 Surface antigen BADSM9389_RS18530 PF07244 Surface antigen variable number repeat BADSM9389_RS18530 PF17243 POTRA domain TamA domain 1 BADSM9389_RS18535 PF01625 Peptide methionine sulfoxide reductase BADSM9389_RS18555 PF00403 Heavy-metal-associated domain BADSM9389_RS18560 PF01595 Cyclin M transmembrane N-terminal domain BADSM9389_RS18560 PF03471 Transporter associated domain BADSM9389_RS18560 PF00571 CBS domain BADSM9389_RS18565 PF06526 Protein of unknown function (DUF1107) BADSM9389_RS18570 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BADSM9389_RS18575 PF00459 Inositol monophosphatase family BADSM9389_RS18580 PF00149 Calcineurin-like phosphoesterase BADSM9389_RS18580 PF02872 5'-nucleotidase, C-terminal domain BADSM9389_RS18585 PF01638 HxlR-like helix-turn-helix BADSM9389_RS18590 PF05368 NmrA-like family BADSM9389_RS18600 PF00892 EamA-like transporter family BADSM9389_RS18605 PF04405 Domain of Unknown function (DUF542) BADSM9389_RS18605 PF01814 Hemerythrin HHE cation binding domain BADSM9389_RS18610 PF00324 Amino acid permease BADSM9389_RS18615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BADSM9389_RS18615 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BADSM9389_RS18620 PF08525 Opacity-associated protein A N-terminal motif BADSM9389_RS18620 PF04225 Opacity-associated protein A LysM-like domain BADSM9389_RS18625 PF01281 Ribosomal protein L9, N-terminal domain BADSM9389_RS18625 PF03948 Ribosomal protein L9, C-terminal domain BADSM9389_RS18630 PF01084 Ribosomal protein S18 BADSM9389_RS18635 PF00436 Single-strand binding protein family BADSM9389_RS18640 PF01250 Ribosomal protein S6 BADSM9389_RS18645 PF07338 Protein of unknown function (DUF1471) BADSM9389_RS18650 PF00326 Prolyl oligopeptidase family BADSM9389_RS18655 PF07338 Protein of unknown function (DUF1471) BADSM9389_RS18660 PF07338 Protein of unknown function (DUF1471) BADSM9389_RS18665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BADSM9389_RS18665 PF18158 Adaptive response protein AidB N-terminal domain BADSM9389_RS18665 PF02770 Acyl-CoA dehydrogenase, middle domain BADSM9389_RS18670 PF00588 SpoU rRNA Methylase family BADSM9389_RS18670 PF08032 RNA 2'-O ribose methyltransferase substrate binding BADSM9389_RS18675 PF17876 Cold shock domain BADSM9389_RS18675 PF00575 S1 RNA binding domain BADSM9389_RS18675 PF08206 Ribonuclease B OB domain BADSM9389_RS18675 PF00773 RNB domain BADSM9389_RS18675 PF08461 Ribonuclease R winged-helix domain BADSM9389_RS18680 PF02082 Transcriptional regulator BADSM9389_RS18685 PF00709 Adenylosuccinate synthetase BADSM9389_RS18690 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BADSM9389_RS18695 PF01145 SPFH domain / Band 7 family BADSM9389_RS18700 PF01145 SPFH domain / Band 7 family BADSM9389_RS18700 PF12221 Bacterial membrane protein N terminal BADSM9389_RS18705 PF01926 50S ribosome-binding GTPase BADSM9389_RS18705 PF13167 GTP-binding GTPase N-terminal BADSM9389_RS18705 PF16360 GTP-binding GTPase Middle Region BADSM9389_RS18710 PF17209 Hfq protein BADSM9389_RS18720 PF01119 DNA mismatch repair protein, C-terminal domain BADSM9389_RS18720 PF08676 MutL C terminal dimerisation domain BADSM9389_RS18725 PF01520 N-acetylmuramoyl-L-alanine amidase BADSM9389_RS18730 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BADSM9389_RS18735 PF01256 Carbohydrate kinase BADSM9389_RS18735 PF03853 YjeF-related protein N-terminus BADSM9389_RS18740 PF08331 Domain of unknown function (DUF1730) BADSM9389_RS18760 PF00929 Exonuclease BADSM9389_RS18765 PF03193 RsgA GTPase BADSM9389_RS18770 PF02666 Phosphatidylserine decarboxylase BADSM9389_RS18775 PF12794 Mechanosensitive ion channel inner membrane domain 1 BADSM9389_RS18775 PF12795 Mechanosensitive ion channel porin domain BADSM9389_RS18775 PF00924 Mechanosensitive ion channel BADSM9389_RS18785 PF00152 tRNA synthetases class II (D, K and N) BADSM9389_RS18790 PF00890 FAD binding domain BADSM9389_RS18790 PF02910 Fumarate reductase flavoprotein C-term BADSM9389_RS18795 PF13183 4Fe-4S dicluster domain BADSM9389_RS18795 PF13085 2Fe-2S iron-sulfur cluster binding domain BADSM9389_RS18800 PF02300 Fumarate reductase subunit C BADSM9389_RS18805 PF02313 Fumarate reductase subunit D BADSM9389_RS18810 PF00144 Beta-lactamase BADSM9389_RS18815 PF08212 Lipocalin-like domain BADSM9389_RS18820 PF00893 Small Multidrug Resistance protein BADSM9389_RS18825 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS18830 PF08085 Entericidin EcnA/B family BADSM9389_RS18835 PF08085 Entericidin EcnA/B family BADSM9389_RS18840 PF08207 Elongation factor P (EF-P) KOW-like domain BADSM9389_RS18840 PF01132 Elongation factor P (EF-P) OB domain BADSM9389_RS18840 PF09285 Elongation factor P, C-terminal BADSM9389_RS18845 PF04055 Radical SAM superfamily BADSM9389_RS18850 PF13698 Domain of unknown function (DUF4156) BADSM9389_RS18855 PF00118 TCP-1/cpn60 chaperonin family BADSM9389_RS18860 PF00166 Chaperonin 10 Kd subunit BADSM9389_RS18865 PF04186 FxsA cytoplasmic membrane protein BADSM9389_RS18870 PF10415 Fumarase C C-terminus BADSM9389_RS18870 PF00206 Lyase BADSM9389_RS18875 PF03605 Anaerobic c4-dicarboxylate membrane transporter BADSM9389_RS18880 PF03091 CutA1 divalent ion tolerance protein BADSM9389_RS18885 PF11412 Disulphide bond corrector protein DsbC BADSM9389_RS18885 PF02683 Cytochrome C biogenesis protein transmembrane region BADSM9389_RS18900 PF00583 Acetyltransferase (GNAT) family BADSM9389_RS18935 PF00360 Phytochrome region BADSM9389_RS18935 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS18935 PF01590 GAF domain BADSM9389_RS18935 PF00563 EAL domain BADSM9389_RS18940 PF00884 Sulfatase BADSM9389_RS18940 PF16385 Domain of unknown function BADSM9389_RS18945 PF04055 Radical SAM superfamily BADSM9389_RS18945 PF13186 Iron-sulfur cluster-binding domain BADSM9389_RS18950 PF07726 ATPase family associated with various cellular activities (AAA) BADSM9389_RS18950 PF17863 AAA lid domain BADSM9389_RS18955 PF01882 Protein of unknown function DUF58 BADSM9389_RS18985 PF00313 'Cold-shock' DNA-binding domain BADSM9389_RS18990 PF08501 Shikimate dehydrogenase substrate binding domain BADSM9389_RS18990 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BADSM9389_RS18990 PF01488 Shikimate / quinate 5-dehydrogenase BADSM9389_RS18995 PF07690 Major Facilitator Superfamily BADSM9389_RS19000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BADSM9389_RS19005 PF02798 Glutathione S-transferase, N-terminal domain BADSM9389_RS19020 PF07437 YfaZ precursor BADSM9389_RS19025 PF00691 OmpA family BADSM9389_RS19025 PF01389 OmpA-like transmembrane domain BADSM9389_RS19030 PF15977 Winged helix-turn-helix DNA binding BADSM9389_RS19035 PF11742 Protein of unknown function (DUF3302) BADSM9389_RS19040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BADSM9389_RS19040 PF00529 HlyD membrane-fusion protein of T1SS BADSM9389_RS19045 PF00892 EamA-like transporter family BADSM9389_RS19050 PF13426 PAS domain BADSM9389_RS19050 PF00990 Diguanylate cyclase, GGDEF domain BADSM9389_RS19050 PF00563 EAL domain BADSM9389_RS19055 PF01738 Dienelactone hydrolase family BADSM9389_RS19060 PF00892 EamA-like transporter family BADSM9389_RS19065 PF13520 Amino acid permease BADSM9389_RS19070 PF00282 Pyridoxal-dependent decarboxylase conserved domain BADSM9389_RS19080 PF10938 YfdX protein BADSM9389_RS19085 PF01627 Hpt domain BADSM9389_RS19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS19085 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS19085 PF00072 Response regulator receiver domain BADSM9389_RS19085 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS19090 PF00196 Bacterial regulatory proteins, luxR family BADSM9389_RS19090 PF00072 Response regulator receiver domain BADSM9389_RS19095 PF02378 Phosphotransferase system, EIIC BADSM9389_RS19100 PF00232 Glycosyl hydrolase family 1 BADSM9389_RS19105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS19110 PF13990 YjcZ-like protein BADSM9389_RS19115 PF00350 Dynamin family BADSM9389_RS19120 PF08274 PhnA Zinc-Ribbon BADSM9389_RS19120 PF03831 PhnA domain BADSM9389_RS19125 PF06983 3-demethylubiquinone-9 3-methyltransferase BADSM9389_RS19135 PF00005 ABC transporter BADSM9389_RS19145 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS19150 PF07702 UTRA domain BADSM9389_RS19150 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS19155 PF06754 Phosphonate metabolism protein PhnG BADSM9389_RS19160 PF05845 Bacterial phosphonate metabolism protein (PhnH) BADSM9389_RS19165 PF05861 Bacterial phosphonate metabolism protein (PhnI) BADSM9389_RS19170 PF06007 Phosphonate metabolism protein PhnJ BADSM9389_RS19175 PF00005 ABC transporter BADSM9389_RS19180 PF00005 ABC transporter BADSM9389_RS19185 PF07969 Amidohydrolase family BADSM9389_RS19195 PF00583 Acetyltransferase (GNAT) family BADSM9389_RS19200 PF12706 Beta-lactamase superfamily domain BADSM9389_RS19210 PF06082 Exopolysaccharide biosynthesis protein YbjH BADSM9389_RS19215 PF06251 Capsule biosynthesis GfcC BADSM9389_RS19220 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF BADSM9389_RS19230 PF00342 Phosphoglucose isomerase BADSM9389_RS19240 PF00696 Amino acid kinase family BADSM9389_RS19240 PF01842 ACT domain BADSM9389_RS19270 PF02163 Peptidase family M50 BADSM9389_RS19270 PF17820 PDZ domain BADSM9389_RS19275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS19275 PF00072 Response regulator receiver domain BADSM9389_RS19275 PF13426 PAS domain BADSM9389_RS19290 PF00005 ABC transporter BADSM9389_RS19295 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS19300 PF13407 Periplasmic binding protein domain BADSM9389_RS19310 PF01116 Fructose-bisphosphate aldolase class-II BADSM9389_RS19325 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS19325 PF00072 Response regulator receiver domain BADSM9389_RS19335 PF16177 Acetyl-coenzyme A synthetase N-terminus BADSM9389_RS19335 PF00501 AMP-binding enzyme BADSM9389_RS19335 PF13193 AMP-binding enzyme C-terminal domain BADSM9389_RS19340 PF04341 Protein of unknown function, DUF485 BADSM9389_RS19345 PF00474 Sodium:solute symporter family BADSM9389_RS19350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BADSM9389_RS19350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BADSM9389_RS19355 PF04172 LrgB-like family BADSM9389_RS19360 PF03788 LrgA family BADSM9389_RS19365 PF03466 LysR substrate binding domain BADSM9389_RS19365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS19370 PF00999 Sodium/hydrogen exchanger family BADSM9389_RS19375 PF00860 Permease family BADSM9389_RS19380 PF02798 Glutathione S-transferase, N-terminal domain BADSM9389_RS19380 PF00043 Glutathione S-transferase, C-terminal domain BADSM9389_RS19385 PF00376 MerR family regulatory protein BADSM9389_RS19385 PF09278 MerR, DNA binding BADSM9389_RS19390 PF12833 Helix-turn-helix domain BADSM9389_RS19395 PF15940 Family of unknown function BADSM9389_RS19400 PF00497 Bacterial extracellular solute-binding proteins, family 3 BADSM9389_RS19405 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS19405 PF07687 Peptidase dimerisation domain BADSM9389_RS19410 PF00436 Single-strand binding protein family BADSM9389_RS19415 PF00005 ABC transporter BADSM9389_RS19415 PF17755 UvrA DNA-binding domain BADSM9389_RS19415 PF17760 UvrA interaction domain BADSM9389_RS19430 PF04237 YjbR BADSM9389_RS19435 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BADSM9389_RS19440 PF00155 Aminotransferase class I and II BADSM9389_RS19445 PF00842 Alanine racemase, C-terminal domain BADSM9389_RS19445 PF01168 Alanine racemase, N-terminal domain BADSM9389_RS19450 PF00772 DnaB-like helicase N terminal domain BADSM9389_RS19450 PF03796 DnaB-like helicase C terminal domain BADSM9389_RS19455 PF00107 Zinc-binding dehydrogenase BADSM9389_RS19455 PF08240 Alcohol dehydrogenase GroES-like domain BADSM9389_RS19460 PF01207 Dihydrouridine synthase (Dus) BADSM9389_RS19475 PF01475 Ferric uptake regulator family BADSM9389_RS19480 PF05532 CsbD-like BADSM9389_RS19485 PF01554 MatE BADSM9389_RS19490 PF01726 LexA DNA binding domain BADSM9389_RS19490 PF00717 Peptidase S24-like BADSM9389_RS19495 PF01219 Prokaryotic diacylglycerol kinase BADSM9389_RS19500 PF01553 Acyltransferase BADSM9389_RS19505 PF01040 UbiA prenyltransferase family BADSM9389_RS19510 PF04345 Chorismate lyase BADSM9389_RS19515 PF07148 Maltose operon periplasmic protein precursor (MalM) BADSM9389_RS19520 PF02264 LamB porin BADSM9389_RS19525 PF17912 MalK OB fold domain BADSM9389_RS19525 PF00005 ABC transporter BADSM9389_RS19530 PF01547 Bacterial extracellular solute-binding protein BADSM9389_RS19535 PF14785 Maltose transport system permease protein MalF P2 domain BADSM9389_RS19535 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS19540 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS19545 PF06146 Phosphate-starvation-inducible E BADSM9389_RS19550 PF11656 YjbD family (DUF3811) BADSM9389_RS19555 PF01479 S4 domain BADSM9389_RS19555 PF00849 RNA pseudouridylate synthase BADSM9389_RS19565 PF02690 Na+/Pi-cotransporter BADSM9389_RS19570 PF02574 Homocysteine S-methyltransferase BADSM9389_RS19570 PF02965 Vitamin B12 dependent methionine synthase, activation domain BADSM9389_RS19570 PF02310 B12 binding domain BADSM9389_RS19570 PF00809 Pterin binding enzyme BADSM9389_RS19570 PF02607 B12 binding domain BADSM9389_RS19575 PF09339 IclR helix-turn-helix domain BADSM9389_RS19575 PF01614 Bacterial transcriptional regulator BADSM9389_RS19580 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BADSM9389_RS19585 PF00463 Isocitrate lyase family BADSM9389_RS19590 PF01274 Malate synthase BADSM9389_RS19595 PF04204 Homoserine O-succinyltransferase BADSM9389_RS19620 PF02142 MGS-like domain BADSM9389_RS19620 PF01808 AICARFT/IMPCHase bienzyme BADSM9389_RS19625 PF02843 Phosphoribosylglycinamide synthetase, C domain BADSM9389_RS19625 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BADSM9389_RS19625 PF02844 Phosphoribosylglycinamide synthetase, N domain BADSM9389_RS19630 PF07356 Protein of unknown function (DUF1481) BADSM9389_RS19635 PF00216 Bacterial DNA-binding protein BADSM9389_RS19640 PF04222 Protein of unknown function (DUF416) BADSM9389_RS19645 PF04493 Endonuclease V BADSM9389_RS19650 PF01208 Uroporphyrinogen decarboxylase (URO-D) BADSM9389_RS19655 PF00293 NUDIX domain BADSM9389_RS19655 PF09297 NADH pyrophosphatase zinc ribbon domain BADSM9389_RS19660 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BADSM9389_RS19665 PF01964 Radical SAM ThiC family BADSM9389_RS19665 PF13667 ThiC-associated domain BADSM9389_RS19670 PF02581 Thiamine monophosphate synthase BADSM9389_RS19675 PF00899 ThiF family BADSM9389_RS19680 PF02597 ThiS family BADSM9389_RS19685 PF05690 Thiazole biosynthesis protein ThiG BADSM9389_RS19690 PF06968 Biotin and Thiamin Synthesis associated domain BADSM9389_RS19690 PF04055 Radical SAM superfamily BADSM9389_RS19695 PF01380 SIS domain BADSM9389_RS19700 PF07702 UTRA domain BADSM9389_RS19700 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS19705 PF11975 Family 4 glycosyl hydrolase C-terminal domain BADSM9389_RS19705 PF02056 Family 4 glycosyl hydrolase BADSM9389_RS19710 PF02378 Phosphotransferase system, EIIC BADSM9389_RS19715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS19720 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BADSM9389_RS19725 PF04997 RNA polymerase Rpb1, domain 1 BADSM9389_RS19725 PF04983 RNA polymerase Rpb1, domain 3 BADSM9389_RS19725 PF00623 RNA polymerase Rpb1, domain 2 BADSM9389_RS19725 PF04998 RNA polymerase Rpb1, domain 5 BADSM9389_RS19725 PF05000 RNA polymerase Rpb1, domain 4 BADSM9389_RS19730 PF04565 RNA polymerase Rpb2, domain 3 BADSM9389_RS19730 PF00562 RNA polymerase Rpb2, domain 6 BADSM9389_RS19730 PF04560 RNA polymerase Rpb2, domain 7 BADSM9389_RS19730 PF10385 RNA polymerase beta subunit external 1 domain BADSM9389_RS19730 PF04561 RNA polymerase Rpb2, domain 2 BADSM9389_RS19730 PF04563 RNA polymerase beta subunit BADSM9389_RS19735 PF16320 Ribosomal protein L7/L12 dimerisation domain BADSM9389_RS19735 PF00542 Ribosomal protein L7/L12 C-terminal domain BADSM9389_RS19740 PF00466 Ribosomal protein L10 BADSM9389_RS19745 PF00687 Ribosomal protein L1p/L10e family BADSM9389_RS19750 PF03946 Ribosomal protein L11, N-terminal domain BADSM9389_RS19750 PF00298 Ribosomal protein L11, RNA binding domain BADSM9389_RS19755 PF02357 Transcription termination factor nusG BADSM9389_RS19755 PF00467 KOW motif BADSM9389_RS19760 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BADSM9389_RS19765 PF03144 Elongation factor Tu domain 2 BADSM9389_RS19765 PF03143 Elongation factor Tu C-terminal domain BADSM9389_RS19765 PF00009 Elongation factor Tu GTP binding domain BADSM9389_RS19790 PF00485 Phosphoribulokinase / Uridine kinase family BADSM9389_RS19795 PF03099 Biotin/lipoate A/B protein ligase family BADSM9389_RS19795 PF08279 HTH domain BADSM9389_RS19795 PF02237 Biotin protein ligase C terminal domain BADSM9389_RS19800 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BADSM9389_RS19800 PF01565 FAD binding domain BADSM9389_RS19825 PF12724 Flavodoxin domain BADSM9389_RS19830 PF02386 Cation transport protein BADSM9389_RS19835 PF01205 Uncharacterized protein family UPF0029 BADSM9389_RS19835 PF09186 Domain of unknown function (DUF1949) BADSM9389_RS19840 PF00557 Metallopeptidase family M24 BADSM9389_RS19845 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BADSM9389_RS19845 PF00378 Enoyl-CoA hydratase/isomerase BADSM9389_RS19845 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BADSM9389_RS19850 PF02803 Thiolase, C-terminal domain BADSM9389_RS19850 PF00108 Thiolase, N-terminal domain BADSM9389_RS19855 PF00970 Oxidoreductase FAD-binding domain BADSM9389_RS19855 PF00175 Oxidoreductase NAD-binding domain BADSM9389_RS19860 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BADSM9389_RS19865 PF02357 Transcription termination factor nusG BADSM9389_RS19870 PF00490 Delta-aminolevulinic acid dehydratase BADSM9389_RS19875 PF01026 TatD related DNase BADSM9389_RS19880 PF00902 Sec-independent protein translocase protein (TatC) BADSM9389_RS19890 PF02416 mttA/Hcf106 family BADSM9389_RS19895 PF03109 ABC1 family BADSM9389_RS19900 PF02036 SCP-2 sterol transfer family BADSM9389_RS19905 PF01209 ubiE/COQ5 methyltransferase family BADSM9389_RS19910 PF02646 RmuC family BADSM9389_RS19915 PF01048 Phosphorylase superfamily BADSM9389_RS19920 PF01738 Dienelactone hydrolase family BADSM9389_RS19950 PF08267 Cobalamin-independent synthase, N-terminal domain BADSM9389_RS19950 PF01717 Cobalamin-independent synthase, Catalytic domain BADSM9389_RS19955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS19955 PF03466 LysR substrate binding domain BADSM9389_RS19960 PF00892 EamA-like transporter family BADSM9389_RS19970 PF12146 Serine aminopeptidase, S33 BADSM9389_RS19975 PF01810 LysE type translocator BADSM9389_RS19980 PF01810 LysE type translocator BADSM9389_RS19985 PF09382 RQC domain BADSM9389_RS19985 PF00270 DEAD/DEAH box helicase BADSM9389_RS19985 PF00570 HRDC domain BADSM9389_RS19985 PF16124 RecQ zinc-binding BADSM9389_RS19985 PF00271 Helicase conserved C-terminal domain BADSM9389_RS19990 PF02253 Phospholipase A1 BADSM9389_RS19995 PF03061 Thioesterase superfamily BADSM9389_RS20000 PF00892 EamA-like transporter family BADSM9389_RS20005 PF01544 CorA-like Mg2+ transporter protein BADSM9389_RS20010 PF13361 UvrD-like helicase C-terminal domain BADSM9389_RS20010 PF00580 UvrD/REP helicase N-terminal domain BADSM9389_RS20015 PF13419 Haloacid dehalogenase-like hydrolase BADSM9389_RS20020 PF02899 Phage integrase, N-terminal SAM-like domain BADSM9389_RS20020 PF00589 Phage integrase family BADSM9389_RS20025 PF04340 Protein of unknown function, DUF484 BADSM9389_RS20030 PF01678 Diaminopimelate epimerase BADSM9389_RS20035 PF13627 Prokaryotic lipoprotein-attachment site BADSM9389_RS20040 PF01491 Frataxin-like domain BADSM9389_RS20045 PF12633 Adenylate cyclase NT domain BADSM9389_RS20045 PF01295 Adenylate cyclase, class-I BADSM9389_RS20050 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BADSM9389_RS20050 PF03900 Porphobilinogen deaminase, C-terminal domain BADSM9389_RS20055 PF02602 Uroporphyrinogen-III synthase HemD BADSM9389_RS20060 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BADSM9389_RS20065 PF07219 HemY protein N-terminus BADSM9389_RS20065 PF07719 Tetratricopeptide repeat BADSM9389_RS20095 PF03808 Glycosyl transferase WecB/TagA/CpsF family BADSM9389_RS20100 PF06899 WzyE protein, O-antigen assembly polymerase BADSM9389_RS20105 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 BADSM9389_RS20110 PF01943 Polysaccharide biosynthesis protein BADSM9389_RS20115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BADSM9389_RS20125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BADSM9389_RS20125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BADSM9389_RS20125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BADSM9389_RS20130 PF02350 UDP-N-acetylglucosamine 2-epimerase BADSM9389_RS20135 PF02706 Chain length determinant protein BADSM9389_RS20140 PF00953 Glycosyl transferase family 4 BADSM9389_RS20145 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BADSM9389_RS20145 PF07497 Rho termination factor, RNA-binding domain BADSM9389_RS20145 PF07498 Rho termination factor, N-terminal domain BADSM9389_RS20150 PF00085 Thioredoxin BADSM9389_RS20155 PF00270 DEAD/DEAH box helicase BADSM9389_RS20155 PF00271 Helicase conserved C-terminal domain BADSM9389_RS20160 PF02541 Ppx/GppA phosphatase family BADSM9389_RS20165 PF00580 UvrD/REP helicase N-terminal domain BADSM9389_RS20165 PF13361 UvrD-like helicase C-terminal domain BADSM9389_RS20175 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BADSM9389_RS20175 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BADSM9389_RS20180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS20180 PF03466 LysR substrate binding domain BADSM9389_RS20185 PF00585 C-terminal regulatory domain of Threonine dehydratase BADSM9389_RS20185 PF00291 Pyridoxal-phosphate dependent enzyme BADSM9389_RS20190 PF00920 Dehydratase family BADSM9389_RS20195 PF01063 Amino-transferase class IV BADSM9389_RS20205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BADSM9389_RS20205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BADSM9389_RS20205 PF00205 Thiamine pyrophosphate enzyme, central domain BADSM9389_RS20210 PF08046 IlvGEDA operon leader peptide BADSM9389_RS20215 PF13335 Magnesium chelatase, subunit ChlI C-terminal BADSM9389_RS20215 PF01078 Magnesium chelatase, subunit ChlI BADSM9389_RS20225 PF04219 Protein of unknown function, DUF BADSM9389_RS20230 PF03466 LysR substrate binding domain BADSM9389_RS20230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS20265 PF01177 Asp/Glu/Hydantoin racemase BADSM9389_RS20270 PF07715 TonB-dependent Receptor Plug Domain BADSM9389_RS20270 PF00593 TonB dependent receptor BADSM9389_RS20275 PF05958 tRNA (Uracil-5-)-methyltransferase BADSM9389_RS20280 PF07226 Protein of unknown function (DUF1422) BADSM9389_RS20285 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS20290 PF07992 Pyridine nucleotide-disulphide oxidoreductase BADSM9389_RS20290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BADSM9389_RS20295 PF03466 LysR substrate binding domain BADSM9389_RS20295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS20300 PF14698 Argininosuccinate lyase C-terminal BADSM9389_RS20300 PF00206 Lyase BADSM9389_RS20305 PF00764 Arginosuccinate synthase BADSM9389_RS20310 PF00696 Amino acid kinase family BADSM9389_RS20315 PF02774 Semialdehyde dehydrogenase, dimerisation domain BADSM9389_RS20315 PF01118 Semialdehyde dehydrogenase, NAD binding domain BADSM9389_RS20320 PF01546 Peptidase family M20/M25/M40 BADSM9389_RS20320 PF07687 Peptidase dimerisation domain BADSM9389_RS20325 PF00311 Phosphoenolpyruvate carboxylase BADSM9389_RS20330 PF00884 Sulfatase BADSM9389_RS20335 PF12833 Helix-turn-helix domain BADSM9389_RS20340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS20345 PF04055 Radical SAM superfamily BADSM9389_RS20350 PF02901 Pyruvate formate lyase-like BADSM9389_RS20350 PF01228 Glycine radical BADSM9389_RS20355 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BADSM9389_RS20365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS20365 PF02896 PEP-utilising enzyme, TIM barrel domain BADSM9389_RS20365 PF00381 PTS HPr component phosphorylation site BADSM9389_RS20365 PF05524 PEP-utilising enzyme, N-terminal BADSM9389_RS20365 PF00391 PEP-utilising enzyme, mobile domain BADSM9389_RS20370 PF00923 Transaldolase/Fructose-6-phosphate aldolase BADSM9389_RS20375 PF00465 Iron-containing alcohol dehydrogenase BADSM9389_RS20380 PF00141 Peroxidase BADSM9389_RS20385 PF02219 Methylenetetrahydrofolate reductase BADSM9389_RS20390 PF00742 Homoserine dehydrogenase BADSM9389_RS20390 PF00696 Amino acid kinase family BADSM9389_RS20390 PF03447 Homoserine dehydrogenase, NAD binding domain BADSM9389_RS20395 PF01053 Cys/Met metabolism PLP-dependent enzyme BADSM9389_RS20400 PF01340 Met Apo-repressor, MetJ BADSM9389_RS20405 PF01197 Ribosomal protein L31 BADSM9389_RS20410 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BADSM9389_RS20410 PF18074 Primosomal protein N C-terminal domain BADSM9389_RS20410 PF17764 3′ DNA-binding domain (3′BD) BADSM9389_RS20410 PF00271 Helicase conserved C-terminal domain BADSM9389_RS20410 PF00270 DEAD/DEAH box helicase BADSM9389_RS20415 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS20420 PF05036 Sporulation related domain BADSM9389_RS20425 PF00227 Proteasome subunit BADSM9389_RS20430 PF00004 ATPase family associated with various cellular activities (AAA) BADSM9389_RS20430 PF07724 AAA domain (Cdc48 subfamily) BADSM9389_RS20430 PF10431 C-terminal, D2-small domain, of ClpB protein BADSM9389_RS20435 PF01040 UbiA prenyltransferase family BADSM9389_RS20440 PF03737 Aldolase/RraA BADSM9389_RS20445 PF06005 Cell division protein ZapB BADSM9389_RS20450 PF00230 Major intrinsic protein BADSM9389_RS20455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BADSM9389_RS20455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BADSM9389_RS20460 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BADSM9389_RS20465 PF00175 Oxidoreductase NAD-binding domain BADSM9389_RS20465 PF00970 Oxidoreductase FAD-binding domain BADSM9389_RS20470 PF05656 Protein of unknown function (DUF805) BADSM9389_RS20475 PF07305 Protein of unknown function (DUF1454) BADSM9389_RS20480 PF00121 Triosephosphate isomerase BADSM9389_RS20485 PF02611 CDP-diacylglycerol pyrophosphatase BADSM9389_RS20495 PF00365 Phosphofructokinase BADSM9389_RS20500 PF01545 Cation efflux family BADSM9389_RS20500 PF16916 Dimerisation domain of Zinc Transporter BADSM9389_RS20505 PF07813 LTXXQ motif family protein BADSM9389_RS20510 PF00486 Transcriptional regulatory protein, C terminal BADSM9389_RS20510 PF00072 Response regulator receiver domain BADSM9389_RS20515 PF16527 Two-component sensor protein CpxA, periplasmic domain BADSM9389_RS20515 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS20515 PF00672 HAMP domain BADSM9389_RS20515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS20520 PF00588 SpoU rRNA Methylase family BADSM9389_RS20525 PF06426 Serine acetyltransferase, N-terminal BADSM9389_RS20525 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS20530 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BADSM9389_RS20530 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BADSM9389_RS20535 PF02556 Preprotein translocase subunit SecB BADSM9389_RS20540 PF00462 Glutaredoxin BADSM9389_RS20545 PF00581 Rhodanese-like domain BADSM9389_RS20550 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BADSM9389_RS20550 PF01676 Metalloenzyme superfamily BADSM9389_RS20555 PF01551 Peptidase family M23 BADSM9389_RS20560 PF04748 Divergent polysaccharide deacetylase BADSM9389_RS20565 PF00535 Glycosyl transferase family 2 BADSM9389_RS20570 PF00107 Zinc-binding dehydrogenase BADSM9389_RS20570 PF08240 Alcohol dehydrogenase GroES-like domain BADSM9389_RS20575 PF00155 Aminotransferase class I and II BADSM9389_RS20580 PF01370 NAD dependent epimerase/dehydratase family BADSM9389_RS20585 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BADSM9389_RS20590 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BADSM9389_RS20605 PF01501 Glycosyl transferase family 8 BADSM9389_RS20605 PF08437 Glycosyl transferase family 8 C-terminal BADSM9389_RS20610 PF09612 Bacterial protein of unknown function (HtrL_YibB) BADSM9389_RS20615 PF08437 Glycosyl transferase family 8 C-terminal BADSM9389_RS20615 PF01501 Glycosyl transferase family 8 BADSM9389_RS20620 PF13439 Glycosyltransferase Family 4 BADSM9389_RS20620 PF00534 Glycosyl transferases group 1 BADSM9389_RS20630 PF13439 Glycosyltransferase Family 4 BADSM9389_RS20630 PF00534 Glycosyl transferases group 1 BADSM9389_RS20635 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BADSM9389_RS20640 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BADSM9389_RS20645 PF01467 Cytidylyltransferase-like BADSM9389_RS20650 PF06827 Zinc finger found in FPG and IleRS BADSM9389_RS20650 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BADSM9389_RS20650 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BADSM9389_RS20655 PF00471 Ribosomal protein L33 BADSM9389_RS20660 PF00830 Ribosomal L28 family BADSM9389_RS20665 PF04002 RadC-like JAB domain BADSM9389_RS20670 PF04127 DNA / pantothenate metabolism flavoprotein BADSM9389_RS20670 PF02441 Flavoprotein BADSM9389_RS20675 PF00692 dUTPase BADSM9389_RS20680 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS20685 PF00156 Phosphoribosyl transferase domain BADSM9389_RS20690 PF03725 3' exoribonuclease family, domain 2 BADSM9389_RS20690 PF01138 3' exoribonuclease family, domain 1 BADSM9389_RS20695 PF08340 Domain of unknown function (DUF1732) BADSM9389_RS20695 PF03755 YicC-like family, N-terminal region BADSM9389_RS20700 PF03458 UPF0126 domain BADSM9389_RS20705 PF01653 NAD-dependent DNA ligase adenylation domain BADSM9389_RS20705 PF03120 NAD-dependent DNA ligase OB-fold domain BADSM9389_RS20710 PF00625 Guanylate kinase BADSM9389_RS20715 PF01192 RNA polymerase Rpb6 BADSM9389_RS20720 PF02824 TGS domain BADSM9389_RS20720 PF04607 Region found in RelA / SpoT proteins BADSM9389_RS20720 PF13291 ACT domain BADSM9389_RS20725 PF12105 SpoU, rRNA methylase, C-terminal BADSM9389_RS20725 PF00588 SpoU rRNA Methylase family BADSM9389_RS20730 PF00271 Helicase conserved C-terminal domain BADSM9389_RS20730 PF17191 RecG wedge domain BADSM9389_RS20730 PF00270 DEAD/DEAH box helicase BADSM9389_RS20735 PF03616 Sodium/glutamate symporter BADSM9389_RS20740 PF00860 Permease family BADSM9389_RS20745 PF05170 AsmA family BADSM9389_RS20750 PF00583 Acetyltransferase (GNAT) family BADSM9389_RS20750 PF09500 Putative thioesterase (yiiD_Cterm) BADSM9389_RS20755 PF02580 D-Tyr-tRNA(Tyr) deacylase BADSM9389_RS20760 PF03631 Virulence factor BrkB BADSM9389_RS20765 PF13419 Haloacid dehalogenase-like hydrolase BADSM9389_RS20770 PF08220 DeoR-like helix-turn-helix domain BADSM9389_RS20770 PF00455 DeoR C terminal sensor domain BADSM9389_RS20775 PF00294 pfkB family carbohydrate kinase BADSM9389_RS20780 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BADSM9389_RS20780 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BADSM9389_RS20785 PF01791 DeoC/LacD family aldolase BADSM9389_RS20795 PF01055 Glycosyl hydrolases family 31 BADSM9389_RS20815 PF00120 Glutamine synthetase, catalytic domain BADSM9389_RS20815 PF03951 Glutamine synthetase, beta-Grasp domain BADSM9389_RS20820 PF00989 PAS fold BADSM9389_RS20820 PF00512 His Kinase A (phospho-acceptor) domain BADSM9389_RS20820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BADSM9389_RS20825 PF00072 Response regulator receiver domain BADSM9389_RS20825 PF02954 Bacterial regulatory protein, Fis family BADSM9389_RS20825 PF00158 Sigma-54 interaction domain BADSM9389_RS20830 PF04055 Radical SAM superfamily BADSM9389_RS20830 PF06969 HemN C-terminal domain BADSM9389_RS20835 PF04220 Der GTPase activator (YihI) BADSM9389_RS20840 PF01926 50S ribosome-binding GTPase BADSM9389_RS20845 PF01612 3'-5' exonuclease BADSM9389_RS20845 PF01367 5'-3' exonuclease, C-terminal SAM fold BADSM9389_RS20845 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BADSM9389_RS20845 PF00476 DNA polymerase family A BADSM9389_RS20850 PF01553 Acyltransferase BADSM9389_RS20855 PF01323 DSBA-like thioredoxin domain BADSM9389_RS20860 PF01636 Phosphotransferase enzyme family BADSM9389_RS20865 PF06288 Protein of unknown function (DUF1040) BADSM9389_RS20870 PF12804 MobA-like NTP transferase domain BADSM9389_RS20875 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BADSM9389_RS20905 PF07729 FCD domain BADSM9389_RS20905 PF00392 Bacterial regulatory proteins, gntR family BADSM9389_RS20910 PF07690 Major Facilitator Superfamily BADSM9389_RS20915 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS20920 PF00294 pfkB family carbohydrate kinase BADSM9389_RS20925 PF13407 Periplasmic binding protein domain BADSM9389_RS20930 PF02653 Branched-chain amino acid transport system / permease component BADSM9389_RS20935 PF00005 ABC transporter BADSM9389_RS20940 PF05025 RbsD / FucU transport protein family BADSM9389_RS20945 PF02705 K+ potassium transporter BADSM9389_RS20950 PF12592 Protein of unknown function (DUF3763) BADSM9389_RS20950 PF17868 AAA lid domain BADSM9389_RS20950 PF07728 AAA domain (dynein-related subfamily) BADSM9389_RS20955 PF05762 VWA domain containing CoxE-like protein BADSM9389_RS20960 PF03590 Aspartate-ammonia ligase BADSM9389_RS20965 PF01037 Lrp/AsnC ligand binding domain BADSM9389_RS20970 PF00258 Flavodoxin BADSM9389_RS20975 PF01134 Glucose inhibited division protein A BADSM9389_RS20975 PF13932 GidA associated domain BADSM9389_RS20980 PF02527 rRNA small subunit methyltransferase G BADSM9389_RS20985 PF03899 ATP synthase I chain BADSM9389_RS20990 PF00119 ATP synthase A chain BADSM9389_RS20995 PF00137 ATP synthase subunit C BADSM9389_RS21000 PF00430 ATP synthase B/B' CF(0) BADSM9389_RS21005 PF00213 ATP synthase delta (OSCP) subunit BADSM9389_RS21010 PF00306 ATP synthase alpha/beta chain, C terminal domain BADSM9389_RS21010 PF02874 ATP synthase alpha/beta family, beta-barrel domain BADSM9389_RS21010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BADSM9389_RS21015 PF00231 ATP synthase BADSM9389_RS21020 PF02874 ATP synthase alpha/beta family, beta-barrel domain BADSM9389_RS21020 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BADSM9389_RS21025 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BADSM9389_RS21025 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BADSM9389_RS21030 PF13229 Right handed beta helix region BADSM9389_RS21035 PF00132 Bacterial transferase hexapeptide (six repeats) BADSM9389_RS21035 PF14602 Hexapeptide repeat of succinyl-transferase BADSM9389_RS21035 PF12804 MobA-like NTP transferase domain BADSM9389_RS21040 PF01380 SIS domain BADSM9389_RS21045 PF07690 Major Facilitator Superfamily BADSM9389_RS21050 PF00849 RNA pseudouridylate synthase BADSM9389_RS21050 PF01479 S4 domain BADSM9389_RS21055 PF12849 PBP superfamily domain BADSM9389_RS21060 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS21065 PF00528 Binding-protein-dependent transport system inner membrane component BADSM9389_RS21070 PF00005 ABC transporter BADSM9389_RS21075 PF01895 PhoU domain BADSM9389_RS21080 PF03611 PTS system sugar-specific permease component BADSM9389_RS21090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BADSM9389_RS21095 PF00356 Bacterial regulatory proteins, lacI family BADSM9389_RS21095 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BADSM9389_RS21100 PF13419 Haloacid dehalogenase-like hydrolase BADSM9389_RS21105 PF00860 Permease family BADSM9389_RS21110 PF12833 Helix-turn-helix domain BADSM9389_RS21115 PF12706 Beta-lactamase superfamily domain BADSM9389_RS21120 PF00440 Bacterial regulatory proteins, tetR family BADSM9389_RS21125 PF03358 NADPH-dependent FMN reductase BADSM9389_RS21135 PF00753 Metallo-beta-lactamase superfamily BADSM9389_RS21135 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BADSM9389_RS21135 PF10996 Beta-Casp domain BADSM9389_RS21140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BADSM9389_RS21140 PF03466 LysR substrate binding domain BADSM9389_RS21145 PF10396 GTP-binding protein TrmE N-terminus BADSM9389_RS21145 PF01926 50S ribosome-binding GTPase BADSM9389_RS21145 PF12631 MnmE helical domain BADSM9389_RS21150 PF14849 YidC periplasmic domain BADSM9389_RS21150 PF02096 60Kd inner membrane protein BADSM9389_RS21155 PF01809 Putative membrane protein insertion efficiency factor BADSM9389_RS21160 PF00825 Ribonuclease P BADSM9389_RS21165 PF00468 Ribosomal protein L34