locus-tag	class	description
BADSM9389_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BADSM9389_RS00010	COG0592	DNA-directed DNA polymerase activity
BADSM9389_RS00015	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BADSM9389_RS00025	COG3753	Protein conserved in bacteria
BADSM9389_RS00030	COG0561	phosphatase activity
BADSM9389_RS00035	COG2186	Transcriptional regulator
BADSM9389_RS00040	COG3734	2-keto-3-deoxy-galactonokinase
BADSM9389_RS00045	COG0800	Aldolase
BADSM9389_RS00050	COG4948	Mandelate Racemase Muconate Lactonizing
BADSM9389_RS00055	COG2271	Major facilitator Superfamily
BADSM9389_RS00065	COG0823	Involved in the tonB-independent uptake of proteins
BADSM9389_RS00070	COG5645	(Lipo)protein
BADSM9389_RS00090	COG2188	Transcriptional regulator
BADSM9389_RS00110	COG2610	gluconate transmembrane transporter activity
BADSM9389_RS00115	COG0583	DNA-binding transcription factor activity
BADSM9389_RS00125	COG0765	amino acid transport
BADSM9389_RS00130	COG1126	abc transporter atp-binding protein
BADSM9389_RS00135	COG2814	Major facilitator Superfamily
BADSM9389_RS00155	COG2885	chlorophyll binding
BADSM9389_RS00160	COG0243	molybdopterin cofactor binding
BADSM9389_RS00170	COG2818	Glycosylase
BADSM9389_RS00175	COG5571	outer membrane autotransporter
BADSM9389_RS00180	COG2223	nitrite transmembrane transporter activity
BADSM9389_RS00200	COG0747	negative chemotaxis
BADSM9389_RS00205	COG0601	transmembrane transport
BADSM9389_RS00210	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BADSM9389_RS00215	COG0444	Belongs to the ABC transporter superfamily
BADSM9389_RS00220	COG4608	Belongs to the ABC transporter superfamily
BADSM9389_RS00245	COG1215	transferase activity, transferring glycosyl groups
BADSM9389_RS00250	COG0457	Tetratricopeptide repeat
BADSM9389_RS00260	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BADSM9389_RS00265	COG2852	Protein conserved in bacteria
BADSM9389_RS00270	COG2200	EAL domain
BADSM9389_RS00270	COG2199	diguanylate cyclase activity
BADSM9389_RS00280	COG0612	Peptidase, M16
BADSM9389_RS00285	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BADSM9389_RS00290	COG2200	EAL domain
BADSM9389_RS00295	COG2982	Protein involved in outer membrane biogenesis
BADSM9389_RS00300	COG0477	Major facilitator Superfamily
BADSM9389_RS00305	COG1295	ribonuclease BN
BADSM9389_RS00310	COG0583	DNA-binding transcription factor activity
BADSM9389_RS00315	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS00320	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BADSM9389_RS00335	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BADSM9389_RS00345	COG4580	involved in the transport of maltose and maltodextrins
BADSM9389_RS00350	COG1447	Phosphotransferase system cellobiose-specific component IIA
BADSM9389_RS00355	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS00360	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS00365	COG1609	Transcriptional regulator
BADSM9389_RS00375	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BADSM9389_RS00380	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
BADSM9389_RS00385	COG0339	signal peptide processing
BADSM9389_RS00395	COG0589	response to stress
BADSM9389_RS00405	COG0306	phosphate transporter
BADSM9389_RS00410	COG2081	HI0933 family
BADSM9389_RS00425	COG0628	permease
BADSM9389_RS00430	COG0477	Major facilitator Superfamily
BADSM9389_RS00440	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BADSM9389_RS00450	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BADSM9389_RS00470	COG3714	YhhN family
BADSM9389_RS00480	COG3776	membrane
BADSM9389_RS00485	COG0742	ribosomal rna small subunit methyltransferase
BADSM9389_RS00490	COG0552	protein localization to endoplasmic reticulum
BADSM9389_RS00495	COG2884	Cell division ATP-binding protein ftsE
BADSM9389_RS00500	COG2177	Part of the ABC transporter FtsEX involved in
BADSM9389_RS00505	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BADSM9389_RS00520	COG0683	leucine binding
BADSM9389_RS00525	COG0559	Belongs to the binding-protein-dependent transport system permease family
BADSM9389_RS00530	COG4177	L-phenylalanine transmembrane transporter activity
BADSM9389_RS00535	COG0411	ABC transporter
BADSM9389_RS00540	COG0410	ABC transporter
BADSM9389_RS00565	COG0584	glycerophosphoryl diester phosphodiesterase
BADSM9389_RS00575	COG0405	Gamma-glutamyltransferase
BADSM9389_RS00580	COG1247	-acetyltransferase
BADSM9389_RS00585	COG0673	inositol 2-dehydrogenase activity
BADSM9389_RS00590	COG1741	Belongs to the pirin family
BADSM9389_RS00595	COG1609	Transcriptional regulator
BADSM9389_RS00600	COG3265	gluconokinase activity
BADSM9389_RS00605	COG2610	gluconate transmembrane transporter activity
BADSM9389_RS00610	COG1070	Carbohydrate kinase
BADSM9389_RS00615	COG2115	Belongs to the xylose isomerase family
BADSM9389_RS00620	COG4213	ABC transporter substrate-binding protein
BADSM9389_RS00630	COG4214	carbohydrate transport
BADSM9389_RS00635	COG2207	Transcriptional regulator
BADSM9389_RS00635	COG1609	Transcriptional regulator
BADSM9389_RS00640	COG2992	FlgJ-related protein
BADSM9389_RS00645	COG0366	Alpha amylase catalytic
BADSM9389_RS00650	COG3977	Valine--pyruvate aminotransferase
BADSM9389_RS00655	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
BADSM9389_RS00660	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
BADSM9389_RS00665	COG3383	formate dehydrogenase (NAD+) activity
BADSM9389_RS00670	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BADSM9389_RS00675	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BADSM9389_RS00685	COG3260	NADH ubiquinone oxidoreductase 20
BADSM9389_RS00690	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BADSM9389_RS00695	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
BADSM9389_RS00695	COG3261	NADH dehydrogenase
BADSM9389_RS00700	COG0650	Formate hydrogenlyase subunit 4
BADSM9389_RS00705	COG0651	ATP synthesis coupled electron transport
BADSM9389_RS00710	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BADSM9389_RS00720	COG0375	protein maturation
BADSM9389_RS00725	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BADSM9389_RS00730	COG0298	carbon dioxide binding
BADSM9389_RS00735	COG0409	Hydrogenase expression formation protein
BADSM9389_RS00740	COG0309	Hydrogenase expression formation protein (HypE)
BADSM9389_RS00755	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BADSM9389_RS00760	COG1596	polysaccharide export
BADSM9389_RS00765	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BADSM9389_RS00805	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BADSM9389_RS00810	COG1596	polysaccharide export
BADSM9389_RS00815	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BADSM9389_RS00840	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BADSM9389_RS00845	COG0840	transmembrane signaling receptor activity
BADSM9389_RS00855	COG3710	Transcriptional regulator
BADSM9389_RS00870	COG2211	Major facilitator Superfamily
BADSM9389_RS00880	COG1566	PFAM secretion protein HlyD family protein
BADSM9389_RS00890	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BADSM9389_RS00900	COG1940	carbohydrate kinase activity
BADSM9389_RS00905	COG1012	belongs to the aldehyde dehydrogenase family
BADSM9389_RS00910	COG3276	selenocysteine insertion sequence binding
BADSM9389_RS00920	COG0625	glutathione transferase activity
BADSM9389_RS00925	COG2213	PTS system mannitol-specific
BADSM9389_RS00925	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS00935	COG3722	fumarate hydratase activity
BADSM9389_RS00950	COG3093	addiction module antidote protein HigA
BADSM9389_RS00965	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BADSM9389_RS00975	COG1609	Transcriptional regulator
BADSM9389_RS00980	COG1335	isochorismatase
BADSM9389_RS00995	COG3274	enterobacterial common antigen metabolic process
BADSM9389_RS01005	COG0752	glycyl-tRNA synthetase alpha subunit
BADSM9389_RS01010	COG0751	glycine-tRNA ligase activity
BADSM9389_RS01015	COG0589	response to stress
BADSM9389_RS01020	COG2944	sequence-specific DNA binding
BADSM9389_RS01025	COG2814	Major facilitator Superfamily
BADSM9389_RS01035	COG1278	Cold shock
BADSM9389_RS01040	COG2258	MOSC domain
BADSM9389_RS01070	COG1070	Carbohydrate kinase
BADSM9389_RS01090	COG1129	ABC transporter
BADSM9389_RS01095	COG1172	Belongs to the binding-protein-dependent transport system permease family
BADSM9389_RS01100	COG1172	Belongs to the binding-protein-dependent transport system permease family
BADSM9389_RS01105	COG1454	alcohol dehydrogenase
BADSM9389_RS01125	COG3501	Rhs element vgr protein
BADSM9389_RS01130	COG0835	chemotaxis
BADSM9389_RS01130	COG0784	Response regulator, receiver
BADSM9389_RS01140	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS01165	COG0205	6-phosphofructokinase activity
BADSM9389_RS01170	COG0110	maltose O-acetyltransferase activity
BADSM9389_RS01175	COG2211	Major facilitator Superfamily
BADSM9389_RS01190	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS01195	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BADSM9389_RS01195	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BADSM9389_RS01200	COG1363	Peptidase, m42
BADSM9389_RS01205	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS01205	COG3711	transcriptional antiterminator
BADSM9389_RS01220	COG0437	4 iron, 4 sulfur cluster binding
BADSM9389_RS01225	COG2864	formate dehydrogenase
BADSM9389_RS01255	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BADSM9389_RS01310	COG1501	Belongs to the glycosyl hydrolase 31 family
BADSM9389_RS01315	COG2095	MarC family integral membrane protein
BADSM9389_RS01320	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BADSM9389_RS01345	COG0058	SHG alpha-glucan phosphorylase activity
BADSM9389_RS01350	COG1349	DNA-binding transcription factor activity
BADSM9389_RS01360	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BADSM9389_RS01365	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BADSM9389_RS01370	COG2909	trisaccharide binding
BADSM9389_RS01375	COG0058	SHG alpha-glucan phosphorylase activity
BADSM9389_RS01380	COG1640	4-alpha-glucanotransferase
BADSM9389_RS01390	COG1040	competence protein
BADSM9389_RS01405	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BADSM9389_RS01410	COG1918	ferrous iron import across plasma membrane
BADSM9389_RS01415	COG2183	response to ionizing radiation
BADSM9389_RS01420	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BADSM9389_RS01425	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS01455	COG3501	Rhs element vgr protein
BADSM9389_RS01460	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
BADSM9389_RS01470	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BADSM9389_RS01475	COG1011	Hydrolase
BADSM9389_RS01485	COG0494	nUDIX hydrolase
BADSM9389_RS01490	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
BADSM9389_RS01495	COG4972	Pilus assembly protein
BADSM9389_RS01515	COG4796	Type ii and iii secretion system protein
BADSM9389_RS01520	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BADSM9389_RS01530	COG3266	domain, Protein
BADSM9389_RS01535	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BADSM9389_RS01540	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BADSM9389_RS01550	COG0180	Tryptophanyl-tRNA synthetase
BADSM9389_RS01555	COG2188	Transcriptional regulator
BADSM9389_RS01565	COG3457	Alanine racemase
BADSM9389_RS01570	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BADSM9389_RS01575	COG1735	metal-dependent hydrolase with the TIM-barrel fold
BADSM9389_RS01590	COG0626	cystathionine gamma-synthase activity
BADSM9389_RS01615	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BADSM9389_RS01620	COG0402	S-adenosylhomocysteine deaminase activity
BADSM9389_RS01650	COG1289	transmembrane transporter activity
BADSM9389_RS01660	COG1765	OsmC-like protein
BADSM9389_RS01665	COG3954	Phosphoribulokinase
BADSM9389_RS01670	COG3089	Belongs to the UPF0270 family
BADSM9389_RS01675	COG0429	hydrolase of the alpha beta-hydrolase fold
BADSM9389_RS01685	COG0488	(ABC) transporter
BADSM9389_RS01695	COG0475	glutathione-regulated potassium exporter activity
BADSM9389_RS01695	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BADSM9389_RS01700	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
BADSM9389_RS01705	COG1047	Peptidyl-prolyl cis-trans
BADSM9389_RS01715	COG0545	Peptidyl-prolyl cis-trans isomerase
BADSM9389_RS01720	COG2964	Protein conserved in bacteria
BADSM9389_RS01745	COG0049	tRNA binding
BADSM9389_RS01750	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BADSM9389_RS01755	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BADSM9389_RS01775	COG0051	transcription antitermination factor activity, RNA binding
BADSM9389_RS01780	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BADSM9389_RS01785	COG0088	Forms part of the polypeptide exit tunnel
BADSM9389_RS01790	COG0089	rRNA binding
BADSM9389_RS01800	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BADSM9389_RS01815	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BADSM9389_RS01830	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BADSM9389_RS01840	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BADSM9389_RS01845	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BADSM9389_RS01850	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BADSM9389_RS01855	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BADSM9389_RS01860	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BADSM9389_RS01870	COG1841	ribosomal large subunit assembly
BADSM9389_RS01875	COG0200	Binds to the 23S rRNA
BADSM9389_RS01880	COG0201	protein transport
BADSM9389_RS01895	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BADSM9389_RS01915	COG0789	Transcriptional regulator
BADSM9389_RS01920	COG3036	rescue of stalled ribosome
BADSM9389_RS01950	COG0758	DNA mediated transformation
BADSM9389_RS01960	COG0551	DNA topoisomerase type I activity
BADSM9389_RS01980	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BADSM9389_RS02020	COG1126	abc transporter atp-binding protein
BADSM9389_RS02025	COG0765	amino acid transport
BADSM9389_RS02030	COG4597	amino acid ABC transporter
BADSM9389_RS02035	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BADSM9389_RS02090	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BADSM9389_RS02105	COG4145	pantothenate transmembrane transporter activity
BADSM9389_RS02110	COG3924	membrane
BADSM9389_RS02115	COG0439	Biotin carboxylase
BADSM9389_RS02120	COG0511	ligase activity, forming carbon-carbon bonds
BADSM9389_RS02125	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BADSM9389_RS02140	COG2200	EAL domain
BADSM9389_RS02140	COG2199	diguanylate cyclase activity
BADSM9389_RS02145	COG1077	Cell shape determining protein MreB Mrl
BADSM9389_RS02150	COG1792	Involved in formation and maintenance of cell shape
BADSM9389_RS02155	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BADSM9389_RS02165	COG1530	ribonuclease E activity
BADSM9389_RS02170	COG3164	Protein of unknown function
BADSM9389_RS02175	COG0312	modulator of DNA gyrase
BADSM9389_RS02180	COG0583	DNA-binding transcription factor activity
BADSM9389_RS02200	COG1012	belongs to the aldehyde dehydrogenase family
BADSM9389_RS02205	COG2732	(Barnase) inhibitor
BADSM9389_RS02230	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BADSM9389_RS02235	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BADSM9389_RS02240	COG3105	Protein conserved in bacteria
BADSM9389_RS02245	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
BADSM9389_RS02250	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BADSM9389_RS02260	COG0625	glutathione transferase activity
BADSM9389_RS02265	COG2969	positive regulation of protein catabolic process
BADSM9389_RS02285	COG0493	'glutamate synthase
BADSM9389_RS02290	COG0067	glutamate synthase
BADSM9389_RS02290	COG0070	glutamate synthase
BADSM9389_RS02290	COG0069	glutamate synthase activity
BADSM9389_RS02295	COG1242	4 iron, 4 sulfur cluster binding
BADSM9389_RS02300	COG2198	Histidine kinase
BADSM9389_RS02300	COG0784	Response regulator, receiver
BADSM9389_RS02300	COG5002	protein histidine kinase activity
BADSM9389_RS02305	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
BADSM9389_RS02315	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS02335	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BADSM9389_RS02340	COG1137	ATPase activity
BADSM9389_RS02345	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
BADSM9389_RS02350	COG3117	lipopolysaccharide transmembrane transporter activity
BADSM9389_RS02355	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
BADSM9389_RS02365	COG0530	calcium, potassium:sodium antiporter activity
BADSM9389_RS02370	COG1127	ABC transporter
BADSM9389_RS02375	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
BADSM9389_RS02380	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BADSM9389_RS02385	COG2854	intermembrane phospholipid transfer
BADSM9389_RS02390	COG3113	response to antibiotic
BADSM9389_RS02395	COG5007	Belongs to the BolA IbaG family
BADSM9389_RS02405	COG3423	Transcriptional regulator
BADSM9389_RS02410	COG0142	geranyltranstransferase activity
BADSM9389_RS02415	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BADSM9389_RS02425	COG0697	spore germination
BADSM9389_RS02435	COG0642	Histidine kinase
BADSM9389_RS02440	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS02445	COG2027	D-alanyl-D-alanine carboxypeptidase
BADSM9389_RS02455	COG1534	Rna-binding protein
BADSM9389_RS02470	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BADSM9389_RS02480	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BADSM9389_RS02500	COG0195	Participates in both transcription termination and antitermination
BADSM9389_RS02520	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BADSM9389_RS02540	COG0513	Belongs to the DEAD box helicase family
BADSM9389_RS02545	COG0814	amino acid
BADSM9389_RS02550	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BADSM9389_RS02555	COG0826	peptidase U32
BADSM9389_RS02560	COG0826	peptidase U32
BADSM9389_RS02565	COG3154	lipid carrier protein
BADSM9389_RS02570	COG3153	acetyltransferase
BADSM9389_RS02585	COG0702	epimerase
BADSM9389_RS02590	COG0602	queuosine metabolic process
BADSM9389_RS02600	COG0366	Alpha amylase catalytic
BADSM9389_RS02605	COG1263	PTS System
BADSM9389_RS02605	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS02610	COG1609	Transcriptional regulator
BADSM9389_RS02620	COG3525	Glycosyl hydrolase, family 20, catalytic domain
BADSM9389_RS02640	COG0531	amino acid
BADSM9389_RS02645	COG1982	Orn Lys Arg decarboxylase major
BADSM9389_RS02655	COG2731	YhcH YjgK YiaL family protein
BADSM9389_RS02680	COG4269	membrane
BADSM9389_RS02690	COG2927	DNA polymerase III (CHI subunit)
BADSM9389_RS02695	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BADSM9389_RS02700	COG0795	lipopolysaccharide-transporting ATPase activity
BADSM9389_RS02705	COG0795	lipopolysaccharide-transporting ATPase activity
BADSM9389_RS02710	COG0433	COG0433 Predicted ATPase
BADSM9389_RS02720	COG1451	nucleotide metabolic process
BADSM9389_RS02725	COG2813	Specifically methylates the guanine in position
BADSM9389_RS02730	COG1902	pentaerythritol trinitrate reductase activity
BADSM9389_RS02730	COG0446	pyridine nucleotide-disulphide oxidoreductase
BADSM9389_RS02740	COG1070	Carbohydrate kinase
BADSM9389_RS02750	COG1129	ABC transporter
BADSM9389_RS02755	COG1172	Belongs to the binding-protein-dependent transport system permease family
BADSM9389_RS02770	COG1830	Aldolase
BADSM9389_RS02785	COG4608	Belongs to the ABC transporter superfamily
BADSM9389_RS02790	COG0444	Belongs to the ABC transporter superfamily
BADSM9389_RS02800	COG0601	transmembrane transport
BADSM9389_RS02810	COG0477	Major facilitator Superfamily
BADSM9389_RS02815	COG0840	transmembrane signaling receptor activity
BADSM9389_RS02820	COG2130	NADP-dependent
BADSM9389_RS02825	COG1609	Transcriptional regulator
BADSM9389_RS02830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS02830	COG1263	PTS System
BADSM9389_RS02835	COG2723	6-phospho-beta-galactosidase activity
BADSM9389_RS02860	COG2966	Psort location CytoplasmicMembrane, score
BADSM9389_RS02880	COG2197	response regulator
BADSM9389_RS02885	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BADSM9389_RS02890	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS02895	COG4114	ferric iron reductase
BADSM9389_RS02900	COG3706	GGDEF domain
BADSM9389_RS02930	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
BADSM9389_RS02935	COG0456	acetyltransferase
BADSM9389_RS02940	COG1011	Hydrolase
BADSM9389_RS02945	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BADSM9389_RS02950	COG2823	Periplasmic or secreted lipoprotein
BADSM9389_RS02960	COG4667	esterase of the alpha-beta hydrolase superfamily
BADSM9389_RS02965	COG0084	hydrolase, TatD family'
BADSM9389_RS02970	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BADSM9389_RS02975	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BADSM9389_RS02995	COG3550	peptidyl-serine autophosphorylation
BADSM9389_RS03005	COG3726	membrane protein affecting hemolysin expression
BADSM9389_RS03010	COG0560	Phosphoserine phosphatase
BADSM9389_RS03025	COG0488	(ABC) transporter
BADSM9389_RS03030	COG0741	lytic transglycosylase activity
BADSM9389_RS03050	COG3708	Transcriptional regulator
BADSM9389_RS03050	COG2207	Transcriptional regulator
BADSM9389_RS03055	COG3045	CreA protein
BADSM9389_RS03060	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS03065	COG2205	protein histidine kinase activity
BADSM9389_RS03070	COG4452	Inner membrane protein CreD
BADSM9389_RS03075	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS03085	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
BADSM9389_RS03095	COG0527	aspartate kinase activity
BADSM9389_RS03095	COG0460	homoserine dehydrogenase
BADSM9389_RS03105	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BADSM9389_RS03115	COG3022	response to hydroperoxide
BADSM9389_RS03120	COG1115	amino acid carrier protein
BADSM9389_RS03125	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BADSM9389_RS03130	COG0521	Mo-molybdopterin cofactor biosynthetic process
BADSM9389_RS03140	COG1584	GPR1 FUN34 yaaH family protein
BADSM9389_RS03150	COG0443	Heat shock 70 kDa protein
BADSM9389_RS03155	COG0484	heat shock protein binding
BADSM9389_RS03165	COG0583	DNA-binding transcription factor activity
BADSM9389_RS03175	COG0196	riboflavin kinase activity
BADSM9389_RS03185	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BADSM9389_RS03190	COG1047	Peptidyl-prolyl cis-trans
BADSM9389_RS03200	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS03205	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BADSM9389_RS03210	COG0129	dihydroxy-acid dehydratase activity
BADSM9389_RS03215	COG2271	Major facilitator Superfamily
BADSM9389_RS03220	COG2814	Major facilitator Superfamily
BADSM9389_RS03225	COG0800	Aldolase
BADSM9389_RS03230	COG3734	2-keto-3-deoxy-galactonokinase
BADSM9389_RS03245	COG2140	Oxalate decarboxylase
BADSM9389_RS03255	COG3716	PTS system mannose fructose sorbose family IID component
BADSM9389_RS03260	COG3715	PTS system
BADSM9389_RS03265	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS03265	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS03280	COG1609	Transcriptional regulator
BADSM9389_RS03290	COG2211	Major facilitator Superfamily
BADSM9389_RS03295	COG0673	inositol 2-dehydrogenase activity
BADSM9389_RS03305	COG0673	inositol 2-dehydrogenase activity
BADSM9389_RS03310	COG1609	Transcriptional regulator
BADSM9389_RS03320	COG0505	Belongs to the CarA family
BADSM9389_RS03345	COG1280	lysine exporter protein (LysE YggA)
BADSM9389_RS03355	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BADSM9389_RS03370	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BADSM9389_RS03390	COG0564	pseudouridine synthase activity
BADSM9389_RS03395	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BADSM9389_RS03400	COG0417	DNA replication proofreading
BADSM9389_RS03415	COG3157	Type VI secretion system effector, Hcp
BADSM9389_RS03420	COG0235	Class ii aldolase
BADSM9389_RS03425	COG2160	L-arabinose isomerase activity
BADSM9389_RS03430	COG1069	ribulokinase activity
BADSM9389_RS03440	COG0586	Pfam SNARE associated Golgi protein
BADSM9389_RS03450	COG1178	ABC-type Fe3 transport system permease component
BADSM9389_RS03470	COG2814	Major facilitator Superfamily
BADSM9389_RS03475	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BADSM9389_RS03480	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BADSM9389_RS03490	COG0762	integral membrane protein
BADSM9389_RS03495	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BADSM9389_RS03500	COG2805	Type II/IV secretion system protein
BADSM9389_RS03525	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BADSM9389_RS03530	COG2356	endonuclease I
BADSM9389_RS03535	COG3091	SprT-like family
BADSM9389_RS03540	COG2814	Major facilitator Superfamily
BADSM9389_RS03545	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BADSM9389_RS03555	COG1166	arginine decarboxylase activity
BADSM9389_RS03565	COG0501	Belongs to the peptidase M48B family
BADSM9389_RS03570	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BADSM9389_RS03575	COG3391	amine dehydrogenase activity
BADSM9389_RS03580	COG4771	TonB-dependent receptor
BADSM9389_RS03585	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS03590	COG2213	PTS system mannitol-specific
BADSM9389_RS03595	COG1063	alcohol dehydrogenase
BADSM9389_RS03600	COG1494	fructose-1,6-bisphosphatase
BADSM9389_RS03610	COG1072	(Pantothenic acid kinase))
BADSM9389_RS03615	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BADSM9389_RS03625	COG0191	fructose-bisphosphate aldolase activity
BADSM9389_RS03630	COG0583	DNA-binding transcription factor activity
BADSM9389_RS03640	COG0814	amino acid
BADSM9389_RS03645	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BADSM9389_RS03650	COG1882	Formate acetyltransferase
BADSM9389_RS03655	COG0668	transmembrane transport
BADSM9389_RS03660	COG1279	arginine transmembrane transporter activity
BADSM9389_RS03665	COG2968	Membrane
BADSM9389_RS03675	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BADSM9389_RS03680	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BADSM9389_RS03685	COG3647	Membrane
BADSM9389_RS03690	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BADSM9389_RS03700	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BADSM9389_RS03705	COG3079	Belongs to the UPF0149 family
BADSM9389_RS03710	COG0006	proline dipeptidase activity
BADSM9389_RS03715	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BADSM9389_RS03720	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BADSM9389_RS03740	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS03750	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BADSM9389_RS03755	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
BADSM9389_RS03760	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS03765	COG5002	protein histidine kinase activity
BADSM9389_RS03770	COG2723	6-phospho-beta-galactosidase activity
BADSM9389_RS03775	COG1737	Transcriptional regulator
BADSM9389_RS03780	COG1272	protein, Hemolysin III
BADSM9389_RS03800	COG0716	FMN binding
BADSM9389_RS03805	COG4974	Belongs to the 'phage' integrase family
BADSM9389_RS03815	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BADSM9389_RS03830	COG4942	peptidase
BADSM9389_RS03840	COG0582	viral genome integration into host DNA
BADSM9389_RS03850	COG0702	epimerase
BADSM9389_RS03860	COG0667	Aldo Keto reductase
BADSM9389_RS03865	COG0656	L-ascorbic acid biosynthetic process
BADSM9389_RS03890	COG1902	pentaerythritol trinitrate reductase activity
BADSM9389_RS03895	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BADSM9389_RS03910	COG1902	pentaerythritol trinitrate reductase activity
BADSM9389_RS03915	COG2814	Major facilitator Superfamily
BADSM9389_RS03940	COG5002	protein histidine kinase activity
BADSM9389_RS03950	COG0667	Aldo Keto reductase
BADSM9389_RS03965	COG2169	Transcriptional regulator
BADSM9389_RS03970	COG1486	melibiose metabolic process
BADSM9389_RS03975	COG2211	Major facilitator Superfamily
BADSM9389_RS04010	COG2200	EAL domain
BADSM9389_RS04020	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS04050	COG1538	Outer membrane efflux protein
BADSM9389_RS04065	COG3287	FIST C domain
BADSM9389_RS04065	COG2200	EAL domain
BADSM9389_RS04065	COG2199	diguanylate cyclase activity
BADSM9389_RS04085	COG3300	MHYT domain
BADSM9389_RS04085	COG5001	Diguanylate cyclase
BADSM9389_RS04090	COG2200	EAL domain
BADSM9389_RS04095	COG0840	transmembrane signaling receptor activity
BADSM9389_RS04105	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BADSM9389_RS04115	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS04135	COG2203	Gaf domain
BADSM9389_RS04135	COG2199	diguanylate cyclase activity
BADSM9389_RS04140	COG0183	Belongs to the thiolase family
BADSM9389_RS04150	COG0823	Involved in the tonB-independent uptake of proteins
BADSM9389_RS04155	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS04160	COG0823	Involved in the tonB-independent uptake of proteins
BADSM9389_RS04170	COG3842	ATPase activity
BADSM9389_RS04175	COG0395	ABC-type sugar transport system, permease component
BADSM9389_RS04180	COG1175	transmembrane transport
BADSM9389_RS04190	COG1794	racemase activity, acting on amino acids and derivatives
BADSM9389_RS04195	COG2814	Major facilitator Superfamily
BADSM9389_RS04200	COG0583	DNA-binding transcription factor activity
BADSM9389_RS04210	COG1609	Transcriptional regulator
BADSM9389_RS04215	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS04220	COG2723	6-phospho-beta-galactosidase activity
BADSM9389_RS04225	COG2186	Transcriptional regulator
BADSM9389_RS04255	COG1609	Transcriptional regulator
BADSM9389_RS04270	COG0477	Major facilitator Superfamily
BADSM9389_RS04275	COG0667	Aldo Keto reductase
BADSM9389_RS04285	COG0861	Integral membrane protein TerC family
BADSM9389_RS04315	COG2165	general secretion pathway protein
BADSM9389_RS04320	COG4795	General secretion pathway protein
BADSM9389_RS04330	COG4967	type IV pilus modification protein PilV
BADSM9389_RS04335	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
BADSM9389_RS04340	COG1025	Belongs to the peptidase M16 family
BADSM9389_RS04345	COG1074	ATP-dependent DNA helicase activity
BADSM9389_RS04350	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BADSM9389_RS04355	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BADSM9389_RS04355	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BADSM9389_RS04360	COG0860	N-Acetylmuramoyl-L-alanine amidase
BADSM9389_RS04380	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
BADSM9389_RS04385	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BADSM9389_RS04390	COG2166	iron-sulfur cluster assembly
BADSM9389_RS04395	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BADSM9389_RS04405	COG0583	DNA-binding transcription factor activity
BADSM9389_RS04410	COG2363	Small membrane protein
BADSM9389_RS04415	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
BADSM9389_RS04425	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BADSM9389_RS04440	COG1760	l-serine dehydratase
BADSM9389_RS04445	COG0814	amino acid
BADSM9389_RS04450	COG1611	Belongs to the LOG family
BADSM9389_RS04465	COG3098	single-species biofilm formation
BADSM9389_RS04470	COG0564	pseudouridine synthase activity
BADSM9389_RS04475	COG0716	FMN binding
BADSM9389_RS04480	COG2271	Major facilitator Superfamily
BADSM9389_RS04485	COG4948	Mandelate Racemase Muconate Lactonizing
BADSM9389_RS04490	COG4948	Mandelate Racemase Muconate Lactonizing
BADSM9389_RS04495	COG1929	Belongs to the glycerate kinase type-1 family
BADSM9389_RS04500	COG4999	Histidine kinase
BADSM9389_RS04500	COG2205	protein histidine kinase activity
BADSM9389_RS04500	COG3437	response regulator, receiver
BADSM9389_RS04500	COG3850	Histidine kinase
BADSM9389_RS04505	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BADSM9389_RS04510	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BADSM9389_RS04525	COG3956	TIGRFAM MazG family protein
BADSM9389_RS04535	COG0148	phosphopyruvate hydratase activity
BADSM9389_RS04540	COG1064	alcohol dehydrogenase
BADSM9389_RS04550	COG0700	Nucleoside recognition
BADSM9389_RS04555	COG3366	ferrous iron transmembrane transporter activity
BADSM9389_RS04560	COG0602	queuosine metabolic process
BADSM9389_RS04565	COG0720	synthase
BADSM9389_RS04570	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BADSM9389_RS04585	COG2234	aminopeptidase activity
BADSM9389_RS04640	COG4942	peptidase
BADSM9389_RS04640	COG1388	LysM domain
BADSM9389_RS04645	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BADSM9389_RS04655	COG2951	lytic endotransglycosylase activity
BADSM9389_RS04660	COG0517	IMP dehydrogenase activity
BADSM9389_RS04660	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BADSM9389_RS04665	COG1349	DNA-binding transcription factor activity
BADSM9389_RS04670	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS04675	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS04685	COG3732	PTS system glucitol sorbitol-specific
BADSM9389_RS04690	COG3730	PTS system glucitol sorbitol-specific
BADSM9389_RS04700	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BADSM9389_RS04705	COG0803	Belongs to the bacterial solute-binding protein 9 family
BADSM9389_RS04710	COG1546	Belongs to the CinA family
BADSM9389_RS04730	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
BADSM9389_RS04760	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BADSM9389_RS04765	COG1238	metal cluster binding
BADSM9389_RS04775	COG1854	S-ribosylhomocysteine lyase activity
BADSM9389_RS04780	COG2814	Major facilitator Superfamily
BADSM9389_RS04785	COG1566	PFAM secretion protein HlyD family protein
BADSM9389_RS04790	COG1846	Transcriptional regulator
BADSM9389_RS04800	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
BADSM9389_RS04805	COG2814	Major facilitator Superfamily
BADSM9389_RS04815	COG4176	ABC-type proline glycine betaine transport system permease component
BADSM9389_RS04830	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BADSM9389_RS04835	COG1780	Probably involved in ribonucleotide reductase function
BADSM9389_RS04840	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BADSM9389_RS04845	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BADSM9389_RS04855	COG4575	ribosome binding
BADSM9389_RS04875	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BADSM9389_RS04885	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BADSM9389_RS04905	COG0281	malic enzyme
BADSM9389_RS04925	COG3423	Transcriptional regulator
BADSM9389_RS04935	COG2351	hydroxyisourate hydrolase activity
BADSM9389_RS04945	COG0582	viral genome integration into host DNA
BADSM9389_RS04955	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BADSM9389_RS04980	COG2867	negative regulation of translational initiation
BADSM9389_RS04990	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BADSM9389_RS04995	COG0497	DNA recombination
BADSM9389_RS05010	COG4536	flavin adenine dinucleotide binding
BADSM9389_RS05015	COG4137	Cytochrome C assembly protein
BADSM9389_RS05020	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BADSM9389_RS05040	COG0335	large ribosomal subunit rRNA binding
BADSM9389_RS05050	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BADSM9389_RS05055	COG1605	Chorismate mutase
BADSM9389_RS05055	COG0287	Prephenate dehydrogenase
BADSM9389_RS05065	COG1605	Chorismate mutase
BADSM9389_RS05065	COG0077	Prephenate dehydratase
BADSM9389_RS05070	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BADSM9389_RS05075	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BADSM9389_RS05080	COG0564	pseudouridine synthase activity
BADSM9389_RS05090	COG0542	response to heat
BADSM9389_RS05120	COG0477	Major facilitator Superfamily
BADSM9389_RS05125	COG5544	Lipoprotein
BADSM9389_RS05130	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BADSM9389_RS05135	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BADSM9389_RS05135	COG1042	CoA-binding domain protein
BADSM9389_RS05135	COG0045	succinate-CoA ligase (ADP-forming) activity
BADSM9389_RS05145	COG3118	belongs to the thioredoxin family
BADSM9389_RS05150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BADSM9389_RS05165	COG0513	Belongs to the DEAD box helicase family
BADSM9389_RS05170	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BADSM9389_RS05175	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BADSM9389_RS05195	COG3026	antisigma factor binding
BADSM9389_RS05200	COG3086	response to oxidative stress
BADSM9389_RS05210	COG0681	Belongs to the peptidase S26 family
BADSM9389_RS05230	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
BADSM9389_RS05240	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BADSM9389_RS05245	COG1737	Transcriptional regulator
BADSM9389_RS05250	COG0560	Phosphoserine phosphatase
BADSM9389_RS05260	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
BADSM9389_RS05265	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BADSM9389_RS05265	COG0047	phosphoribosylformylglycinamidine synthase activity
BADSM9389_RS05270	COG2205	protein histidine kinase activity
BADSM9389_RS05275	COG3170	Tfp pilus assembly protein FimV
BADSM9389_RS05280	COG2204	response regulator
BADSM9389_RS05285	COG0347	Belongs to the P(II) protein family
BADSM9389_RS05300	COG1940	carbohydrate kinase activity
BADSM9389_RS05305	COG0457	Tetratricopeptide repeat
BADSM9389_RS05310	COG2814	Major facilitator Superfamily
BADSM9389_RS05310	COG0477	Major facilitator Superfamily
BADSM9389_RS05315	COG2017	converts alpha-aldose to the beta-anomer
BADSM9389_RS05320	COG2814	Major facilitator Superfamily
BADSM9389_RS05325	COG3711	transcriptional antiterminator
BADSM9389_RS05330	COG3683	transport system, periplasmic component
BADSM9389_RS05335	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
BADSM9389_RS05340	COG0483	inositol monophosphate 1-phosphatase activity
BADSM9389_RS05360	COG0822	iron-sulfur transferase activity
BADSM9389_RS05380	COG0633	Ferredoxin
BADSM9389_RS05385	COG2975	iron-sulfur cluster assembly
BADSM9389_RS05400	COG1737	Transcriptional regulator
BADSM9389_RS05405	COG2897	thiosulfate sulfurtransferase activity
BADSM9389_RS05415	COG1263	PTS System
BADSM9389_RS05415	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS05415	COG2190	(PTS) system
BADSM9389_RS05420	COG2373	Large extracellular alpha-helical protein
BADSM9389_RS05425	COG4953	penicillin-binding protein 1C
BADSM9389_RS05455	COG2976	Protein conserved in bacteria
BADSM9389_RS05460	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BADSM9389_RS05475	COG4302	ethanolamine ammonia-lyase activity
BADSM9389_RS05485	COG1645	bacterial-type flagellum-dependent swarming motility
BADSM9389_RS05495	COG0517	IMP dehydrogenase activity
BADSM9389_RS05495	COG0516	GMP reductase activity
BADSM9389_RS05500	COG0519	Catalyzes the synthesis of GMP from XMP
BADSM9389_RS05500	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BADSM9389_RS05505	COG1227	inorganic diphosphatase activity
BADSM9389_RS05515	COG2200	EAL domain
BADSM9389_RS05525	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BADSM9389_RS05530	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BADSM9389_RS05535	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BADSM9389_RS05545	COG2233	PERMEase
BADSM9389_RS05555	COG1393	Belongs to the ArsC family
BADSM9389_RS05560	COG4783	chaperone-mediated protein folding
BADSM9389_RS05565	COG0628	permease
BADSM9389_RS05570	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BADSM9389_RS05575	COG2716	regulation of RNA biosynthetic process
BADSM9389_RS05585	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
BADSM9389_RS05595	COG2321	neutral zinc metallopeptidase
BADSM9389_RS05600	COG1444	tRNA N-acetyltransferase activity
BADSM9389_RS05605	COG0400	carboxylic ester hydrolase activity
BADSM9389_RS05620	COG1393	Belongs to the ArsC family
BADSM9389_RS05630	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BADSM9389_RS05635	COG2197	response regulator
BADSM9389_RS05640	COG3850	Histidine kinase
BADSM9389_RS05645	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
BADSM9389_RS05645	COG0493	'glutamate synthase
BADSM9389_RS05650	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
BADSM9389_RS05650	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
BADSM9389_RS05655	COG3062	negative regulation of establishment of protein localization
BADSM9389_RS05665	COG3043	anaerobic respiration
BADSM9389_RS05670	COG3005	denitrification pathway
BADSM9389_RS05675	COG0494	nUDIX hydrolase
BADSM9389_RS05680	COG5342	invasion associated locus B
BADSM9389_RS05685	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BADSM9389_RS05690	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BADSM9389_RS05705	COG0860	N-Acetylmuramoyl-L-alanine amidase
BADSM9389_RS05710	COG0456	acetyltransferase
BADSM9389_RS05725	COG2837	iron assimilation
BADSM9389_RS05730	COG4150	thiosulfate binding
BADSM9389_RS05735	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
BADSM9389_RS05740	COG4208	sulfate ABC transporter
BADSM9389_RS05745	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
BADSM9389_RS05765	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS05780	COG3115	cell septum assembly
BADSM9389_RS05790	COG3530	Putative quorum-sensing-regulated virulence factor
BADSM9389_RS05795	COG0385	Bile acid
BADSM9389_RS05800	COG0583	DNA-binding transcription factor activity
BADSM9389_RS05835	COG3415	Transposase
BADSM9389_RS05850	COG2200	EAL domain
BADSM9389_RS05850	COG2199	diguanylate cyclase activity
BADSM9389_RS05860	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BADSM9389_RS05875	COG0667	Aldo Keto reductase
BADSM9389_RS05880	COG3961	Belongs to the TPP enzyme family
BADSM9389_RS05895	COG3279	Response regulator of the LytR AlgR family
BADSM9389_RS05900	COG3275	phosphorelay sensor kinase activity
BADSM9389_RS05910	COG0436	Aminotransferase
BADSM9389_RS05925	COG1309	transcriptional regulator
BADSM9389_RS05935	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BADSM9389_RS05970	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BADSM9389_RS05975	COG3122	Protein conserved in bacteria
BADSM9389_RS06020	COG2116	formate transmembrane transporter activity
BADSM9389_RS06030	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BADSM9389_RS06035	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BADSM9389_RS06040	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BADSM9389_RS06050	COG1138	Cytochrome C-type biogenesis protein
BADSM9389_RS06055	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BADSM9389_RS06060	COG4235	cytochrome complex assembly
BADSM9389_RS06060	COG3088	subunit of a heme lyase
BADSM9389_RS06075	COG3691	Protein conserved in bacteria
BADSM9389_RS06090	COG2062	phosphohistidine phosphatase, SixA
BADSM9389_RS06100	COG2890	protein-(glutamine-N5) methyltransferase activity
BADSM9389_RS06115	COG0730	response to heat
BADSM9389_RS06120	COG3101	peptidyl-lysine hydroxylation
BADSM9389_RS06130	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
BADSM9389_RS06130	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BADSM9389_RS06135	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BADSM9389_RS06155	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BADSM9389_RS06165	COG0586	Pfam SNARE associated Golgi protein
BADSM9389_RS06175	COG0285	dihydrofolate synthase activity
BADSM9389_RS06180	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
BADSM9389_RS06185	COG1286	toxin biosynthetic process
BADSM9389_RS06190	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BADSM9389_RS06195	COG0163	prenyltransferase activity
BADSM9389_RS06205	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BADSM9389_RS06215	COG4160	amino acid transport
BADSM9389_RS06220	COG4598	ABC transporter
BADSM9389_RS06225	COG1090	epimerase
BADSM9389_RS06230	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BADSM9389_RS06235	COG0625	glutathione transferase activity
BADSM9389_RS06240	COG0625	glutathione transferase activity
BADSM9389_RS06245	COG0622	Phosphoesterase
BADSM9389_RS06275	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BADSM9389_RS06280	COG0490	domain, Protein
BADSM9389_RS06280	COG0471	metal ion transport
BADSM9389_RS06285	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
BADSM9389_RS06290	COG0436	Aminotransferase
BADSM9389_RS06295	COG0583	DNA-binding transcription factor activity
BADSM9389_RS06305	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BADSM9389_RS06340	COG0839	Belongs to the complex I subunit 6 family
BADSM9389_RS06345	COG0713	ATP synthesis coupled electron transport
BADSM9389_RS06350	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BADSM9389_RS06355	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BADSM9389_RS06365	COG0415	Belongs to the DNA photolyase family
BADSM9389_RS06370	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BADSM9389_RS06375	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BADSM9389_RS06380	COG1984	allophanate hydrolase subunit 2
BADSM9389_RS06395	COG0372	Belongs to the citrate synthase family
BADSM9389_RS06400	COG2009	succinate dehydrogenase
BADSM9389_RS06405	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
BADSM9389_RS06410	COG1053	succinate dehydrogenase
BADSM9389_RS06420	COG0567	Dehydrogenase, E1 component
BADSM9389_RS06425	COG0508	dehydrogenase complex catalyzes the overall conversion of
BADSM9389_RS06435	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BADSM9389_RS06450	COG3501	Rhs element vgr protein
BADSM9389_RS06455	COG2188	Transcriptional regulator
BADSM9389_RS06460	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BADSM9389_RS06460	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BADSM9389_RS06460	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS06465	COG0383	alpha-mannosidase activity
BADSM9389_RS06470	COG1271	oxidase subunit
BADSM9389_RS06475	COG1294	oxidase, subunit
BADSM9389_RS06480	COG4890	Cyd operon protein YbgT
BADSM9389_RS06485	COG3790	cyd operon protein YbgE
BADSM9389_RS06490	COG0824	Thioesterase
BADSM9389_RS06495	COG0811	peptide transport
BADSM9389_RS06500	COG0848	biopolymer transport protein
BADSM9389_RS06505	COG3064	Membrane
BADSM9389_RS06515	COG2885	chlorophyll binding
BADSM9389_RS06520	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
BADSM9389_RS06565	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BADSM9389_RS06585	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BADSM9389_RS06595	COG2017	converts alpha-aldose to the beta-anomer
BADSM9389_RS06605	COG1085	galactose-1-phosphate uridylyltransferase
BADSM9389_RS06610	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BADSM9389_RS06615	COG1119	ATPase activity
BADSM9389_RS06620	COG3585	molybdate ion transport
BADSM9389_RS06620	COG2005	Transcriptional regulator
BADSM9389_RS06630	COG2733	membrane
BADSM9389_RS06635	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BADSM9389_RS06640	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BADSM9389_RS06660	COG3082	Protein of unknown function (DUF1414)
BADSM9389_RS06665	COG3081	Nucleoid-associated protein
BADSM9389_RS06670	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BADSM9389_RS06675	COG1061	Type III restriction enzyme res subunit
BADSM9389_RS06680	COG1187	pseudouridine synthase activity
BADSM9389_RS06685	COG2814	Major facilitator Superfamily
BADSM9389_RS06695	COG4172	Belongs to the ABC transporter superfamily
BADSM9389_RS06700	COG4239	(ABC) transporter, permease
BADSM9389_RS06705	COG4174	ABC transporter (Permease)
BADSM9389_RS06710	COG4166	transmembrane transport
BADSM9389_RS06715	COG2200	EAL domain
BADSM9389_RS06720	COG0791	NLP P60 protein
BADSM9389_RS06725	COG0671	phosphoesterase, PA-phosphatase related
BADSM9389_RS06730	COG0523	cobalamin synthesis protein
BADSM9389_RS06735	COG0246	Mannitol dehydrogenase
BADSM9389_RS06765	COG2814	Major facilitator Superfamily
BADSM9389_RS06775	COG1105	Belongs to the carbohydrate kinase PfkB family
BADSM9389_RS06780	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BADSM9389_RS06780	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BADSM9389_RS06780	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
BADSM9389_RS06790	COG2855	membrane
BADSM9389_RS06795	COG0583	DNA-binding transcription factor activity
BADSM9389_RS06810	COG0833	amino acid
BADSM9389_RS06815	COG4771	TonB-dependent receptor
BADSM9389_RS06825	COG0477	Major facilitator Superfamily
BADSM9389_RS06835	COG2311	Membrane
BADSM9389_RS06850	COG1129	ABC transporter
BADSM9389_RS06860	COG2949	membrane
BADSM9389_RS06865	COG0295	cytidine deaminase activity
BADSM9389_RS06870	COG1346	cytolysis
BADSM9389_RS06880	COG1376	ErfK ybiS ycfS ynhG family protein
BADSM9389_RS06885	COG0488	(ABC) transporter
BADSM9389_RS06895	COG2271	Major facilitator Superfamily
BADSM9389_RS06900	COG1609	Transcriptional regulator
BADSM9389_RS06905	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BADSM9389_RS06910	COG0303	'Molybdopterin
BADSM9389_RS06925	COG0747	negative chemotaxis
BADSM9389_RS06950	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BADSM9389_RS06960	COG2133	pyrroloquinoline quinone binding
BADSM9389_RS06965	COG0625	glutathione transferase activity
BADSM9389_RS06970	COG1686	Belongs to the peptidase S11 family
BADSM9389_RS06975	COG1349	DNA-binding transcription factor activity
BADSM9389_RS06980	COG0671	phosphoesterase, PA-phosphatase related
BADSM9389_RS06985	COG2814	Major facilitator Superfamily
BADSM9389_RS06990	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BADSM9389_RS06990	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BADSM9389_RS06995	COG0489	protein tyrosine kinase activity
BADSM9389_RS07000	COG3275	phosphorelay sensor kinase activity
BADSM9389_RS07010	COG4807	Protein conserved in bacteria
BADSM9389_RS07015	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
BADSM9389_RS07025	COG2010	Cytochrome c
BADSM9389_RS07025	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BADSM9389_RS07035	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BADSM9389_RS07035	COG2010	Cytochrome c
BADSM9389_RS07040	COG1966	Carbon starvation protein
BADSM9389_RS07050	COG1196	nuclear chromosome segregation
BADSM9389_RS07050	COG3264	Mechanosensitive ion channel
BADSM9389_RS07100	COG2200	EAL domain
BADSM9389_RS07230	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
BADSM9389_RS07235	COG0351	phosphomethylpyrimidine kinase
BADSM9389_RS07240	COG2188	Transcriptional regulator
BADSM9389_RS07245	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BADSM9389_RS07250	COG1397	ADP-ribosylglycohydrolase
BADSM9389_RS07255	COG2211	Major facilitator Superfamily
BADSM9389_RS07260	COG1830	Aldolase
BADSM9389_RS07265	COG4948	Mandelate Racemase Muconate Lactonizing
BADSM9389_RS07270	COG0747	negative chemotaxis
BADSM9389_RS07275	COG0601	transmembrane transport
BADSM9389_RS07285	COG0444	Belongs to the ABC transporter superfamily
BADSM9389_RS07290	COG4608	Belongs to the ABC transporter superfamily
BADSM9389_RS07315	COG3121	Chaperone
BADSM9389_RS07340	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS07345	COG2205	protein histidine kinase activity
BADSM9389_RS07350	COG0477	Major facilitator Superfamily
BADSM9389_RS07380	COG0443	Heat shock 70 kDa protein
BADSM9389_RS07385	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BADSM9389_RS07390	COG5001	Diguanylate cyclase
BADSM9389_RS07390	COG5002	protein histidine kinase activity
BADSM9389_RS07390	COG3447	MASE1 domain protein
BADSM9389_RS07405	COG2982	Protein involved in outer membrane biogenesis
BADSM9389_RS07410	COG1253	flavin adenine dinucleotide binding
BADSM9389_RS07425	COG3206	protein involved in exopolysaccharide biosynthesis
BADSM9389_RS07425	COG0489	protein tyrosine kinase activity
BADSM9389_RS07430	COG0463	Glycosyl transferase, family 2
BADSM9389_RS07435	COG1045	serine acetyltransferase
BADSM9389_RS07440	COG0438	transferase activity, transferring glycosyl groups
BADSM9389_RS07450	COG1216	Glycosyl transferase, family 2
BADSM9389_RS07455	COG0110	maltose O-acetyltransferase activity
BADSM9389_RS07460	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
BADSM9389_RS07465	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BADSM9389_RS07470	COG1051	belongs to the nudix hydrolase family
BADSM9389_RS07475	COG0297	glycogen (starch) synthase activity
BADSM9389_RS07485	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BADSM9389_RS07490	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BADSM9389_RS07495	COG2244	polysaccharide biosynthetic process
BADSM9389_RS07500	COG2327	Polysaccharide pyruvyl transferase
BADSM9389_RS07505	COG0438	transferase activity, transferring glycosyl groups
BADSM9389_RS07520	COG2244	polysaccharide biosynthetic process
BADSM9389_RS07525	COG1216	Glycosyl transferase, family 2
BADSM9389_RS07545	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
BADSM9389_RS07550	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BADSM9389_RS07555	COG1051	belongs to the nudix hydrolase family
BADSM9389_RS07575	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BADSM9389_RS07580	COG1088	dTDP-glucose 4,6-dehydratase activity
BADSM9389_RS07585	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BADSM9389_RS07610	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BADSM9389_RS07630	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BADSM9389_RS07640	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BADSM9389_RS07645	COG0583	DNA-binding transcription factor activity
BADSM9389_RS07650	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BADSM9389_RS07660	COG0531	amino acid
BADSM9389_RS07665	COG2925	Exonuclease
BADSM9389_RS07680	COG1289	transmembrane transporter activity
BADSM9389_RS07685	COG2926	Belongs to the UPF0265 family
BADSM9389_RS07710	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
BADSM9389_RS07790	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
BADSM9389_RS07795	COG0604	alcohol dehydrogenase
BADSM9389_RS07800	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BADSM9389_RS07810	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BADSM9389_RS07830	COG5001	Diguanylate cyclase
BADSM9389_RS07830	COG3300	MHYT domain
BADSM9389_RS07840	COG0386	Belongs to the glutathione peroxidase family
BADSM9389_RS07860	COG0559	Belongs to the binding-protein-dependent transport system permease family
BADSM9389_RS07870	COG0411	ABC transporter
BADSM9389_RS07880	COG0534	Mate efflux family protein
BADSM9389_RS07885	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BADSM9389_RS07890	COG0583	DNA-binding transcription factor activity
BADSM9389_RS07895	COG0604	alcohol dehydrogenase
BADSM9389_RS07900	COG0778	Nitroreductase
BADSM9389_RS07905	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BADSM9389_RS07935	COG1840	ABC-type Fe3 transport system, periplasmic component
BADSM9389_RS07945	COG0006	proline dipeptidase activity
BADSM9389_RS07950	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BADSM9389_RS07975	COG2423	ornithine cyclodeaminase activity
BADSM9389_RS07980	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BADSM9389_RS08010	COG4232	protein-disulfide reductase activity
BADSM9389_RS08020	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BADSM9389_RS08035	COG1376	ErfK ybiS ycfS ynhG family protein
BADSM9389_RS08050	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BADSM9389_RS08060	COG1418	mRNA catabolic process
BADSM9389_RS08075	COG3727	T/G mismatch-specific endonuclease activity
BADSM9389_RS08080	COG0697	spore germination
BADSM9389_RS08085	COG2354	Protein conserved in bacteria
BADSM9389_RS08090	COG5475	Uncharacterized small protein (DUF2158)
BADSM9389_RS08115	COG2197	response regulator
BADSM9389_RS08125	COG1987	bacterial-type flagellum assembly
BADSM9389_RS08160	COG2882	bacterial-type flagellum organization
BADSM9389_RS08170	COG1317	bacterial-type flagellum organization
BADSM9389_RS08195	COG0366	Alpha amylase catalytic
BADSM9389_RS08250	COG2197	response regulator
BADSM9389_RS08260	COG2197	response regulator
BADSM9389_RS08290	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BADSM9389_RS08295	COG1263	PTS System
BADSM9389_RS08295	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS08300	COG3012	SEC-C Motif Domain Protein
BADSM9389_RS08300	COG3318	Belongs to the UPF0149 family
BADSM9389_RS08305	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BADSM9389_RS08345	COG0297	glycogen (starch) synthase activity
BADSM9389_RS08345	COG0438	transferase activity, transferring glycosyl groups
BADSM9389_RS08370	COG1528	Iron-storage protein
BADSM9389_RS08390	COG0477	Major facilitator Superfamily
BADSM9389_RS08405	COG0601	transmembrane transport
BADSM9389_RS08410	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BADSM9389_RS08415	COG0444	Belongs to the ABC transporter superfamily
BADSM9389_RS08420	COG4608	Belongs to the ABC transporter superfamily
BADSM9389_RS08440	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BADSM9389_RS08455	COG1653	transport
BADSM9389_RS08460	COG1175	transmembrane transport
BADSM9389_RS08465	COG0395	ABC-type sugar transport system, permease component
BADSM9389_RS08470	COG3842	ATPase activity
BADSM9389_RS08480	COG1528	Iron-storage protein
BADSM9389_RS08485	COG2207	Transcriptional regulator
BADSM9389_RS08495	COG2211	Major facilitator Superfamily
BADSM9389_RS08500	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
BADSM9389_RS08525	COG4297	protein containing double-stranded beta helix domain
BADSM9389_RS08530	COG1879	ABC-type sugar transport system periplasmic component
BADSM9389_RS08540	COG1172	Belongs to the binding-protein-dependent transport system permease family
BADSM9389_RS08585	COG0835	chemotaxis
BADSM9389_RS08590	COG1301	dicarboxylic acid transport
BADSM9389_RS08625	COG0840	transmembrane signaling receptor activity
BADSM9389_RS08640	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS08690	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
BADSM9389_RS08695	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BADSM9389_RS08700	COG0018	arginyl-trna synthetase
BADSM9389_RS08705	COG3102	Protein conserved in bacteria
BADSM9389_RS08710	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BADSM9389_RS08715	COG3142	Participates in the control of copper homeostasis
BADSM9389_RS08735	COG3788	relative of glutathione S-transferase, MAPEG superfamily
BADSM9389_RS08740	COG1801	Protein of unknown function DUF72
BADSM9389_RS08745	COG1335	isochorismatase
BADSM9389_RS08755	COG0494	nUDIX hydrolase
BADSM9389_RS08780	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BADSM9389_RS08790	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
BADSM9389_RS08795	COG0739	heme binding
BADSM9389_RS08800	COG1560	Kdo2-lipid A biosynthetic process
BADSM9389_RS08805	COG0469	pyruvate kinase activity
BADSM9389_RS08810	COG1737	Transcriptional regulator
BADSM9389_RS08815	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BADSM9389_RS08820	COG0129	dihydroxy-acid dehydratase activity
BADSM9389_RS08825	COG0800	Aldolase
BADSM9389_RS08835	COG3141	response to X-ray
BADSM9389_RS08840	COG2979	Protein of unknown function (DUF533)
BADSM9389_RS08845	COG1770	oligopeptidase
BADSM9389_RS08850	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BADSM9389_RS08865	COG2372	response to copper ion
BADSM9389_RS08870	COG1276	copper resistance
BADSM9389_RS08885	COG0659	secondary active sulfate transmembrane transporter activity
BADSM9389_RS08890	COG0456	acetyltransferase
BADSM9389_RS08915	COG3008	intermembrane lipid transfer
BADSM9389_RS08920	COG2995	paraquat-inducible protein a
BADSM9389_RS08925	COG1956	GAF domain-containing protein
BADSM9389_RS08930	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
BADSM9389_RS08935	COG0793	Belongs to the peptidase S41A family
BADSM9389_RS08945	COG2814	Major facilitator Superfamily
BADSM9389_RS08950	COG1414	Transcriptional regulator
BADSM9389_RS08980	COG0768	penicillin binding
BADSM9389_RS08985	COG2226	methyltransferase
BADSM9389_RS09000	COG3716	PTS system mannose fructose sorbose family IID component
BADSM9389_RS09005	COG3715	PTS system
BADSM9389_RS09010	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS09010	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS09015	COG1253	flavin adenine dinucleotide binding
BADSM9389_RS09020	COG2200	EAL domain
BADSM9389_RS09030	COG2271	Major facilitator Superfamily
BADSM9389_RS09035	COG0583	DNA-binding transcription factor activity
BADSM9389_RS09040	COG1760	l-serine dehydratase
BADSM9389_RS09060	COG0251	oxidation-reduction process
BADSM9389_RS09065	COG1199	ATP-dependent helicase activity
BADSM9389_RS09070	COG1214	PFAM Peptidase M22, glycoprotease
BADSM9389_RS09075	COG3065	identical protein binding
BADSM9389_RS09090	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
BADSM9389_RS09095	COG2894	cell division
BADSM9389_RS09100	COG0850	regulation of cytokinetic process
BADSM9389_RS09105	COG3100	YcgL domain-containing protein
BADSM9389_RS09110	COG2951	lytic endotransglycosylase activity
BADSM9389_RS09115	COG0179	Fumarylacetoacetate (FAA) hydrolase
BADSM9389_RS09125	COG2199	diguanylate cyclase activity
BADSM9389_RS09130	COG3042	response to heat
BADSM9389_RS09145	COG2186	Transcriptional regulator
BADSM9389_RS09150	COG2719	SpoVR family
BADSM9389_RS09175	COG1619	proteins homologs of microcin C7 resistance protein MccF
BADSM9389_RS09195	COG3408	Glycogen debranching enzyme
BADSM9389_RS09195	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
BADSM9389_RS09205	COG1609	Transcriptional regulator
BADSM9389_RS09210	COG3250	beta-galactosidase activity
BADSM9389_RS09215	COG2731	YhcH YjgK YiaL family protein
BADSM9389_RS09220	COG0531	amino acid
BADSM9389_RS09225	COG4774	siderophore transport
BADSM9389_RS09235	COG2207	Transcriptional regulator
BADSM9389_RS09240	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BADSM9389_RS09245	COG3119	arylsulfatase activity
BADSM9389_RS09250	COG2149	membrane
BADSM9389_RS09260	COG0641	radical SAM
BADSM9389_RS09280	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BADSM9389_RS09280	COG0517	IMP dehydrogenase activity
BADSM9389_RS09285	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BADSM9389_RS09290	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BADSM9389_RS09295	COG3443	Belongs to the bacterial solute-binding protein 9 family
BADSM9389_RS09310	COG3539	Fimbrial protein
BADSM9389_RS09340	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BADSM9389_RS09345	COG1012	belongs to the aldehyde dehydrogenase family
BADSM9389_RS09350	COG0531	amino acid
BADSM9389_RS09365	COG1012	belongs to the aldehyde dehydrogenase family
BADSM9389_RS09375	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
BADSM9389_RS09385	COG3121	Chaperone
BADSM9389_RS09390	COG3539	Fimbrial protein
BADSM9389_RS09405	COG3188	usher protein
BADSM9389_RS09430	COG0583	DNA-binding transcription factor activity
BADSM9389_RS09440	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BADSM9389_RS09445	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
BADSM9389_RS09450	COG2080	2 iron, 2 sulfur cluster binding
BADSM9389_RS09465	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS09470	COG0697	spore germination
BADSM9389_RS09475	COG2194	sulfuric ester hydrolase activity
BADSM9389_RS09480	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BADSM9389_RS09485	COG0463	Glycosyl transferase, family 2
BADSM9389_RS09490	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BADSM9389_RS09490	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BADSM9389_RS09495	COG0726	polysaccharide deacetylase
BADSM9389_RS09500	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BADSM9389_RS09505	COG2076	Multidrug Resistance protein
BADSM9389_RS09510	COG2076	Multidrug Resistance protein
BADSM9389_RS09515	COG3104	oligopeptide transport
BADSM9389_RS09520	COG1393	Belongs to the ArsC family
BADSM9389_RS09525	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BADSM9389_RS09530	COG0640	Transcriptional regulator
BADSM9389_RS09535	COG0431	NADPH-dependent FMN reductase
BADSM9389_RS09540	COG3685	Protein conserved in bacteria
BADSM9389_RS09565	COG2200	EAL domain
BADSM9389_RS09570	COG0789	Transcriptional regulator
BADSM9389_RS09575	COG0583	DNA-binding transcription factor activity
BADSM9389_RS09580	COG1289	transmembrane transporter activity
BADSM9389_RS09585	COG1902	pentaerythritol trinitrate reductase activity
BADSM9389_RS09590	COG0583	DNA-binding transcription factor activity
BADSM9389_RS09600	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BADSM9389_RS09615	COG3121	Chaperone
BADSM9389_RS09655	COG0307	riboflavin synthase, alpha
BADSM9389_RS09660	COG1609	Transcriptional regulator
BADSM9389_RS09665	COG2723	6-phospho-beta-galactosidase activity
BADSM9389_RS09670	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS09675	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
BADSM9389_RS09680	COG2814	Major facilitator Superfamily
BADSM9389_RS09685	COG0583	DNA-binding transcription factor activity
BADSM9389_RS09705	COG0791	NLP P60 protein
BADSM9389_RS09710	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
BADSM9389_RS09725	COG1902	pentaerythritol trinitrate reductase activity
BADSM9389_RS09730	COG1309	transcriptional regulator
BADSM9389_RS09740	COG3313	Fe-S protein
BADSM9389_RS09745	COG4989	oxidoreductase activity
BADSM9389_RS09755	COG1289	transmembrane transporter activity
BADSM9389_RS09760	COG1566	PFAM secretion protein HlyD family protein
BADSM9389_RS09780	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
BADSM9389_RS09785	COG3895	Periplasmic Protein
BADSM9389_RS09805	COG0625	glutathione transferase activity
BADSM9389_RS09810	COG3104	oligopeptide transport
BADSM9389_RS09815	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BADSM9389_RS09860	COG0673	inositol 2-dehydrogenase activity
BADSM9389_RS09865	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BADSM9389_RS09880	COG4948	Mandelate Racemase Muconate Lactonizing
BADSM9389_RS09885	COG1063	alcohol dehydrogenase
BADSM9389_RS09890	COG0477	Major facilitator Superfamily
BADSM9389_RS09895	COG0246	Mannitol dehydrogenase
BADSM9389_RS09900	COG1802	Transcriptional regulator
BADSM9389_RS09905	COG4221	oxidoreductase activity
BADSM9389_RS09910	COG0402	S-adenosylhomocysteine deaminase activity
BADSM9389_RS09920	COG1529	Aldehyde oxidase and xanthine dehydrogenase
BADSM9389_RS09930	COG0339	signal peptide processing
BADSM9389_RS09950	COG3121	Chaperone
BADSM9389_RS09980	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BADSM9389_RS09990	COG3121	Chaperone
BADSM9389_RS10045	COG0159	tryptophan synthase activity
BADSM9389_RS10050	COG0133	tryptophan synthase activity
BADSM9389_RS10060	COG0512	Glutamine amidotransferase of anthranilate synthase
BADSM9389_RS10060	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BADSM9389_RS10070	COG0613	PHP domain protein
BADSM9389_RS10075	COG0009	L-threonylcarbamoyladenylate synthase
BADSM9389_RS10080	COG1187	pseudouridine synthase activity
BADSM9389_RS10085	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
BADSM9389_RS10090	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS10095	COG0616	signal peptide processing
BADSM9389_RS10125	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BADSM9389_RS10135	COG0671	phosphoesterase, PA-phosphatase related
BADSM9389_RS10140	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
BADSM9389_RS10145	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
BADSM9389_RS10150	COG0284	orotidine-5'-phosphate decarboxylase activity
BADSM9389_RS10155	COG0023	Translation Initiation Factor
BADSM9389_RS10165	COG1349	DNA-binding transcription factor activity
BADSM9389_RS10170	COG1882	Formate acetyltransferase
BADSM9389_RS10175	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BADSM9389_RS10190	COG1024	Enoyl-CoA hydratase
BADSM9389_RS10195	COG0583	DNA-binding transcription factor activity
BADSM9389_RS10205	COG5001	Diguanylate cyclase
BADSM9389_RS10215	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BADSM9389_RS10215	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BADSM9389_RS10240	COG4171	peptide transport system, permease
BADSM9389_RS10255	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BADSM9389_RS10260	COG1842	Phage shock protein A
BADSM9389_RS10270	COG1983	PspC domain protein
BADSM9389_RS10280	COG0366	Alpha amylase catalytic
BADSM9389_RS10285	COG1653	transport
BADSM9389_RS10290	COG1175	transmembrane transport
BADSM9389_RS10295	COG0395	ABC-type sugar transport system, permease component
BADSM9389_RS10300	COG1063	alcohol dehydrogenase
BADSM9389_RS10305	COG1082	Xylose isomerase domain protein TIM barrel
BADSM9389_RS10310	COG0673	inositol 2-dehydrogenase activity
BADSM9389_RS10315	COG1554	hydrolase, family 65, central catalytic
BADSM9389_RS10320	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BADSM9389_RS10325	COG3842	ATPase activity
BADSM9389_RS10335	COG1609	Transcriptional regulator
BADSM9389_RS10340	COG3106	COG3106 Predicted ATPase
BADSM9389_RS10350	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
BADSM9389_RS10355	COG0437	4 iron, 4 sulfur cluster binding
BADSM9389_RS10360	COG5557	Pfam Polysulphide reductase, NrfD
BADSM9389_RS10365	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
BADSM9389_RS10370	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BADSM9389_RS10375	COG1773	rubredoxin
BADSM9389_RS10385	COG0298	carbon dioxide binding
BADSM9389_RS10390	COG3283	Transcriptional regulator of aromatic amino acids metabolism
BADSM9389_RS10395	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BADSM9389_RS10400	COG4948	Mandelate Racemase Muconate Lactonizing
BADSM9389_RS10405	COG2866	Carboxypeptidase
BADSM9389_RS10410	COG4166	transmembrane transport
BADSM9389_RS10420	COG3706	GGDEF domain
BADSM9389_RS10420	COG2203	Gaf domain
BADSM9389_RS10420	COG5001	Diguanylate cyclase
BADSM9389_RS10420	COG4251	negative regulation of phosphorylation
BADSM9389_RS10450	COG0513	Belongs to the DEAD box helicase family
BADSM9389_RS10455	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BADSM9389_RS10460	COG3038	cytochrome b561
BADSM9389_RS10480	COG0322	excinuclease ABC activity
BADSM9389_RS10500	COG2076	Multidrug Resistance protein
BADSM9389_RS10505	COG1215	transferase activity, transferring glycosyl groups
BADSM9389_RS10510	COG4783	chaperone-mediated protein folding
BADSM9389_RS10525	COG1294	oxidase, subunit
BADSM9389_RS10530	COG1271	oxidase subunit
BADSM9389_RS10540	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BADSM9389_RS10560	COG0346	lactoylglutathione lyase activity
BADSM9389_RS10565	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BADSM9389_RS10570	COG3842	ATPase activity
BADSM9389_RS10575	COG1176	ABC-type spermidine putrescine transport system, permease component I
BADSM9389_RS10580	COG1177	transmembrane transport
BADSM9389_RS10585	COG1012	belongs to the aldehyde dehydrogenase family
BADSM9389_RS10595	COG1566	PFAM secretion protein HlyD family protein
BADSM9389_RS10615	COG2841	Protein conserved in bacteria
BADSM9389_RS10620	COG2375	cellular response to nickel ion
BADSM9389_RS10630	COG0840	transmembrane signaling receptor activity
BADSM9389_RS10635	COG3550	peptidyl-serine autophosphorylation
BADSM9389_RS10640	COG3550	peptidyl-serine autophosphorylation
BADSM9389_RS10650	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BADSM9389_RS10655	COG1473	amidohydrolase
BADSM9389_RS10660	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BADSM9389_RS10675	COG0765	amino acid transport
BADSM9389_RS10680	COG1126	abc transporter atp-binding protein
BADSM9389_RS10700	COG0814	amino acid
BADSM9389_RS10710	COG0583	DNA-binding transcription factor activity
BADSM9389_RS10720	COG2030	dehydratase
BADSM9389_RS10720	COG1012	belongs to the aldehyde dehydrogenase family
BADSM9389_RS10725	COG3396	Phenylacetate-CoA oxygenase
BADSM9389_RS10730	COG3460	Phenylacetate-CoA oxygenase
BADSM9389_RS10735	COG3396	Phenylacetate-CoA oxygenase
BADSM9389_RS10740	COG2151	metal-sulfur cluster biosynthetic enzyme
BADSM9389_RS10745	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BADSM9389_RS10750	COG1024	Enoyl-CoA hydratase
BADSM9389_RS10755	COG1024	Enoyl-CoA hydratase
BADSM9389_RS10760	COG1250	3-hydroxyacyl-CoA dehydrogenase
BADSM9389_RS10765	COG2050	protein possibly involved in aromatic compounds catabolism
BADSM9389_RS10770	COG0183	Belongs to the thiolase family
BADSM9389_RS10775	COG1541	Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA)
BADSM9389_RS10790	COG3327	negative regulation of DNA-templated transcription, initiation
BADSM9389_RS10795	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BADSM9389_RS10800	COG2207	Transcriptional regulator
BADSM9389_RS10805	COG1012	belongs to the aldehyde dehydrogenase family
BADSM9389_RS10830	COG3272	Protein of unknown function (DUF1722)
BADSM9389_RS10835	COG0789	Transcriptional regulator
BADSM9389_RS10865	COG0747	negative chemotaxis
BADSM9389_RS10870	COG2195	Cleaves the N-terminal amino acid of tripeptides
BADSM9389_RS10880	COG1643	Atp-dependent helicase
BADSM9389_RS10890	COG0076	glutamate decarboxylase activity
BADSM9389_RS10895	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BADSM9389_RS10900	COG3784	Protein of unknown function (DUF1318)
BADSM9389_RS10910	COG2911	Protein conserved in bacteria
BADSM9389_RS10915	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BADSM9389_RS10920	COG3187	Heat shock protein
BADSM9389_RS10925	COG3042	response to heat
BADSM9389_RS10930	COG0674	pyruvate-flavodoxin oxidoreductase activity
BADSM9389_RS10930	COG1013	pyruvate-flavodoxin oxidoreductase activity
BADSM9389_RS10930	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
BADSM9389_RS10930	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
BADSM9389_RS10935	COG0657	acetylesterase activity
BADSM9389_RS10935	COG2755	lipolytic protein G-D-S-L family
BADSM9389_RS10940	COG3391	amine dehydrogenase activity
BADSM9389_RS10945	COG1012	belongs to the aldehyde dehydrogenase family
BADSM9389_RS10955	COG1879	ABC-type sugar transport system periplasmic component
BADSM9389_RS10965	COG1129	ABC transporter
BADSM9389_RS10970	COG1172	Belongs to the binding-protein-dependent transport system permease family
BADSM9389_RS10975	COG3959	Transketolase, thiamine diphosphate binding domain
BADSM9389_RS10980	COG3958	Transketolase
BADSM9389_RS10985	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BADSM9389_RS10995	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BADSM9389_RS11000	COG0366	Alpha amylase catalytic
BADSM9389_RS11005	COG0366	Alpha amylase catalytic
BADSM9389_RS11025	COG1653	transport
BADSM9389_RS11040	COG0673	inositol 2-dehydrogenase activity
BADSM9389_RS11050	COG0673	inositol 2-dehydrogenase activity
BADSM9389_RS11055	COG2211	Major facilitator Superfamily
BADSM9389_RS11080	COG0840	transmembrane signaling receptor activity
BADSM9389_RS11085	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BADSM9389_RS11090	COG3781	membrane
BADSM9389_RS11110	COG5455	response to cobalt ion
BADSM9389_RS11135	COG2207	Transcriptional regulator
BADSM9389_RS11160	COG0826	peptidase U32
BADSM9389_RS11170	COG3135	benzoate transporter
BADSM9389_RS11190	COG0346	lactoylglutathione lyase activity
BADSM9389_RS11195	COG0500	methyltransferase
BADSM9389_RS11200	COG1275	C4-dicarboxylate transporter malic acid transport protein
BADSM9389_RS11205	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BADSM9389_RS11210	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BADSM9389_RS11225	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
BADSM9389_RS11235	COG0436	Aminotransferase
BADSM9389_RS11240	COG0583	DNA-binding transcription factor activity
BADSM9389_RS11250	COG3851	Histidine kinase
BADSM9389_RS11255	COG2271	Major facilitator Superfamily
BADSM9389_RS11260	COG1840	ABC-type Fe3 transport system, periplasmic component
BADSM9389_RS11270	COG3842	ATPase activity
BADSM9389_RS11275	COG5383	Protein conserved in bacteria
BADSM9389_RS11280	COG3485	protocatechuate 3,4-dioxygenase
BADSM9389_RS11285	COG3485	protocatechuate 3,4-dioxygenase
BADSM9389_RS11290	COG0583	DNA-binding transcription factor activity
BADSM9389_RS11295	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BADSM9389_RS11300	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BADSM9389_RS11315	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BADSM9389_RS11325	COG1414	Transcriptional regulator
BADSM9389_RS11330	COG2840	Smr protein MutS2
BADSM9389_RS11335	COG0583	DNA-binding transcription factor activity
BADSM9389_RS11340	COG1473	amidohydrolase
BADSM9389_RS11345	COG1473	amidohydrolase
BADSM9389_RS11350	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
BADSM9389_RS11355	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BADSM9389_RS11360	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BADSM9389_RS11365	COG0589	response to stress
BADSM9389_RS11380	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
BADSM9389_RS11385	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
BADSM9389_RS11395	COG0531	amino acid
BADSM9389_RS11405	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS11410	COG2205	protein histidine kinase activity
BADSM9389_RS11425	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
BADSM9389_RS11425	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
BADSM9389_RS11435	COG5339	Protein conserved in bacteria
BADSM9389_RS11440	COG2015	COG2015, Alkyl sulfatase and related hydrolases
BADSM9389_RS11445	COG1609	Transcriptional regulator
BADSM9389_RS11450	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS11450	COG1263	PTS System
BADSM9389_RS11455	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BADSM9389_RS11465	COG0385	Bile acid
BADSM9389_RS11480	COG0243	molybdopterin cofactor binding
BADSM9389_RS11485	COG0437	4 iron, 4 sulfur cluster binding
BADSM9389_RS11490	COG3302	dmso reductase anchor subunit
BADSM9389_RS11495	COG3381	protein complex oligomerization
BADSM9389_RS11525	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BADSM9389_RS11530	COG1940	carbohydrate kinase activity
BADSM9389_RS11535	COG0583	DNA-binding transcription factor activity
BADSM9389_RS11540	COG2814	Major facilitator Superfamily
BADSM9389_RS11545	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BADSM9389_RS11555	COG3591	Belongs to the peptidase S1B family
BADSM9389_RS11565	COG2076	Multidrug Resistance protein
BADSM9389_RS11570	COG0628	permease
BADSM9389_RS11575	COG1942	4-Oxalocrotonate Tautomerase
BADSM9389_RS11580	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BADSM9389_RS11585	COG1609	Transcriptional regulator
BADSM9389_RS11600	COG4772	TonB-dependent receptor
BADSM9389_RS11610	COG2350	Protein conserved in bacteria
BADSM9389_RS11630	COG3099	Belongs to the UPF0263 family
BADSM9389_RS11635	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BADSM9389_RS11640	COG4608	Belongs to the ABC transporter superfamily
BADSM9389_RS11645	COG0444	Belongs to the ABC transporter superfamily
BADSM9389_RS11650	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BADSM9389_RS11655	COG0601	transmembrane transport
BADSM9389_RS11660	COG4166	transmembrane transport
BADSM9389_RS11665	COG2095	MarC family integral membrane protein
BADSM9389_RS11670	COG1454	alcohol dehydrogenase
BADSM9389_RS11670	COG1012	belongs to the aldehyde dehydrogenase family
BADSM9389_RS11675	COG1435	thymidine kinase activity
BADSM9389_RS11680	COG2916	Histone family protein nucleoid-structuring protein H-NS
BADSM9389_RS11690	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BADSM9389_RS11695	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS11700	COG1752	Esterase of the alpha-beta hydrolase superfamily
BADSM9389_RS11710	COG0788	formyltetrahydrofolate deformylase activity
BADSM9389_RS11725	COG2181	nitrate reductase activity
BADSM9389_RS11730	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BADSM9389_RS11735	COG1140	nitrate reductase beta subunit
BADSM9389_RS11740	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BADSM9389_RS11745	COG2271	Major facilitator Superfamily
BADSM9389_RS11750	COG1082	Xylose isomerase domain protein TIM barrel
BADSM9389_RS11755	COG2188	Transcriptional regulator
BADSM9389_RS11760	COG2223	nitrite transmembrane transporter activity
BADSM9389_RS11765	COG3850	Histidine kinase
BADSM9389_RS11770	COG2197	response regulator
BADSM9389_RS11775	COG4932	domain protein
BADSM9389_RS11780	COG0243	molybdopterin cofactor binding
BADSM9389_RS11785	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BADSM9389_RS11785	COG2146	nitrite reductase [NAD(P)H] activity
BADSM9389_RS11790	COG1116	anion transmembrane transporter activity
BADSM9389_RS11795	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BADSM9389_RS11800	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BADSM9389_RS11805	COG3707	response regulator
BADSM9389_RS11810	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
BADSM9389_RS11820	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
BADSM9389_RS11825	COG4572	Cation transport regulator
BADSM9389_RS11830	COG0387	Pfam Sodium calcium exchanger
BADSM9389_RS11850	COG2890	protein-(glutamine-N5) methyltransferase activity
BADSM9389_RS11855	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BADSM9389_RS11870	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BADSM9389_RS11880	COG0659	secondary active sulfate transmembrane transporter activity
BADSM9389_RS11895	COG0012	GTP binding
BADSM9389_RS11905	COG3121	Chaperone
BADSM9389_RS11910	COG3188	usher protein
BADSM9389_RS11915	COG3539	Fimbrial protein
BADSM9389_RS11940	COG2223	nitrite transmembrane transporter activity
BADSM9389_RS11955	COG2203	Gaf domain
BADSM9389_RS11955	COG3706	GGDEF domain
BADSM9389_RS11955	COG5001	Diguanylate cyclase
BADSM9389_RS11955	COG4251	negative regulation of phosphorylation
BADSM9389_RS11980	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BADSM9389_RS12000	COG2814	Major facilitator Superfamily
BADSM9389_RS12005	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BADSM9389_RS12010	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS12015	COG2226	methyltransferase
BADSM9389_RS12015	COG1073	alpha beta
BADSM9389_RS12045	COG1376	ErfK ybiS ycfS ynhG family protein
BADSM9389_RS12060	COG0719	Fe-S assembly protein
BADSM9389_RS12065	COG0396	ATPase activity
BADSM9389_RS12070	COG0719	Fe-S assembly protein
BADSM9389_RS12075	COG0316	Belongs to the HesB IscA family
BADSM9389_RS12090	COG4566	intracellular signal transduction
BADSM9389_RS12095	COG2205	protein histidine kinase activity
BADSM9389_RS12095	COG4191	Histidine kinase
BADSM9389_RS12095	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS12100	COG1051	belongs to the nudix hydrolase family
BADSM9389_RS12110	COG2944	sequence-specific DNA binding
BADSM9389_RS12115	COG2050	protein possibly involved in aromatic compounds catabolism
BADSM9389_RS12120	COG0247	lactate metabolic process
BADSM9389_RS12120	COG0277	FAD linked oxidase domain protein
BADSM9389_RS12125	COG0628	permease
BADSM9389_RS12135	COG1472	Belongs to the glycosyl hydrolase 3 family
BADSM9389_RS12140	COG2211	Major facilitator Superfamily
BADSM9389_RS12145	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BADSM9389_RS12145	COG0574	Belongs to the PEP-utilizing enzyme family
BADSM9389_RS12150	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BADSM9389_RS12160	COG4256	Hemin uptake protein
BADSM9389_RS12170	COG3720	iron ion transport
BADSM9389_RS12175	COG4558	Periplasmic binding protein
BADSM9389_RS12180	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BADSM9389_RS12185	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
BADSM9389_RS12200	COG1609	Transcriptional regulator
BADSM9389_RS12205	COG0791	NLP P60 protein
BADSM9389_RS12215	COG0386	Belongs to the glutathione peroxidase family
BADSM9389_RS12230	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BADSM9389_RS12230	COG0072	phenylalanine-tRNA ligase activity
BADSM9389_RS12235	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BADSM9389_RS12250	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BADSM9389_RS12255	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BADSM9389_RS12270	COG3137	Salt-induced outer membrane protein
BADSM9389_RS12275	COG1105	Belongs to the carbohydrate kinase PfkB family
BADSM9389_RS12285	COG3001	Fructosamine kinase
BADSM9389_RS12295	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BADSM9389_RS12300	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS12305	COG1988	membrane-bound metal-dependent
BADSM9389_RS12315	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
BADSM9389_RS12325	COG0753	catalase activity
BADSM9389_RS12330	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BADSM9389_RS12350	COG2986	histidine ammonia-lyase
BADSM9389_RS12365	COG0402	S-adenosylhomocysteine deaminase activity
BADSM9389_RS12370	COG1228	amidohydrolase
BADSM9389_RS12380	COG3678	ATP-independent chaperone mediated protein folding
BADSM9389_RS12400	COG3138	arginine N-succinyltransferase
BADSM9389_RS12410	COG0708	Exodeoxyribonuclease III
BADSM9389_RS12415	COG0398	Pfam SNARE associated Golgi protein
BADSM9389_RS12420	COG4134	Bacterial extracellular solute-binding protein
BADSM9389_RS12425	COG4135	transport system, permease component
BADSM9389_RS12430	COG4136	ATPase activity
BADSM9389_RS12435	COG2897	thiosulfate sulfurtransferase activity
BADSM9389_RS12440	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BADSM9389_RS12445	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BADSM9389_RS12450	COG0494	nUDIX hydrolase
BADSM9389_RS12460	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BADSM9389_RS12470	COG0778	Nitroreductase
BADSM9389_RS12475	COG0616	signal peptide processing
BADSM9389_RS12480	COG0252	asparaginase activity
BADSM9389_RS12485	COG1335	isochorismatase
BADSM9389_RS12495	COG3139	Protein of unknown function (DUF1315)
BADSM9389_RS12505	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BADSM9389_RS12515	COG0656	L-ascorbic acid biosynthetic process
BADSM9389_RS12520	COG3713	MltA-interacting MipA family protein
BADSM9389_RS12525	COG2766	serine protein kinase
BADSM9389_RS12535	COG2199	diguanylate cyclase activity
BADSM9389_RS12545	COG2707	UPF0756 membrane protein
BADSM9389_RS12550	COG2207	Transcriptional regulator
BADSM9389_RS12555	COG2807	transmembrane transport
BADSM9389_RS12560	COG0504	CTP synthase activity
BADSM9389_RS12565	COG1683	Conserved Protein
BADSM9389_RS12575	COG0401	homolog of Blt101
BADSM9389_RS12580	COG1278	Cold shock
BADSM9389_RS12585	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
BADSM9389_RS12605	COG0538	isocitrate dehydrogenase activity
BADSM9389_RS12630	COG2915	High frequency lysogenization protein hflD homolog
BADSM9389_RS12635	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BADSM9389_RS12640	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS12650	COG2850	peptidyl-arginine hydroxylation
BADSM9389_RS12680	COG1177	transmembrane transport
BADSM9389_RS12685	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BADSM9389_RS12700	COG3501	Rhs element vgr protein
BADSM9389_RS12705	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BADSM9389_RS12715	COG4591	ABC-type transport system involved in lipoprotein release permease component
BADSM9389_RS12725	COG4591	ABC-type transport system involved in lipoprotein release permease component
BADSM9389_RS12730	COG4763	Acyl-transferase
BADSM9389_RS12735	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BADSM9389_RS12740	COG1376	ErfK ybiS ycfS ynhG family protein
BADSM9389_RS12740	COG1388	LysM domain
BADSM9389_RS12750	COG1309	transcriptional regulator
BADSM9389_RS12760	COG1309	transcriptional regulator
BADSM9389_RS12780	COG3134	Outer membrane lipoprotein
BADSM9389_RS12785	COG1252	NADH dehydrogenase
BADSM9389_RS12790	COG3150	esterase
BADSM9389_RS12800	COG0510	thiamine kinase activity
BADSM9389_RS12810	COG5633	Lipoprotein
BADSM9389_RS12815	COG0537	adenosine 5'-monophosphoramidase activity
BADSM9389_RS12820	COG4773	Receptor
BADSM9389_RS12825	COG1263	PTS System
BADSM9389_RS12825	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS12830	COG0084	hydrolase, TatD family'
BADSM9389_RS12835	COG0470	DNA polymerase III
BADSM9389_RS12845	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BADSM9389_RS12850	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BADSM9389_RS12855	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BADSM9389_RS12860	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BADSM9389_RS12870	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BADSM9389_RS12885	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BADSM9389_RS12890	COG1399	metal-binding, possibly nucleic acid-binding protein
BADSM9389_RS12900	COG0564	pseudouridine synthase activity
BADSM9389_RS12905	COG1530	ribonuclease E activity
BADSM9389_RS12915	COG1256	bacterial-type flagellum assembly
BADSM9389_RS12945	COG1749	Flagellar hook protein flgE
BADSM9389_RS12955	COG1558	bacterial-type flagellum-dependent cell motility
BADSM9389_RS12960	COG1815	bacterial-type flagellum-dependent cell motility
BADSM9389_RS12980	COG1278	Cold shock
BADSM9389_RS12990	COG0673	inositol 2-dehydrogenase activity
BADSM9389_RS13000	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BADSM9389_RS13010	COG2999	glutathione oxidoreductase activity
BADSM9389_RS13045	COG1560	Kdo2-lipid A biosynthetic process
BADSM9389_RS13060	COG5645	(Lipo)protein
BADSM9389_RS13080	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BADSM9389_RS13085	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
BADSM9389_RS13100	COG0583	DNA-binding transcription factor activity
BADSM9389_RS13120	COG0531	amino acid
BADSM9389_RS13125	COG1982	Orn Lys Arg decarboxylase major
BADSM9389_RS13130	COG2091	lysine biosynthetic process via aminoadipic acid
BADSM9389_RS13135	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BADSM9389_RS13140	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS13150	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BADSM9389_RS13175	COG1216	Glycosyl transferase, family 2
BADSM9389_RS13195	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BADSM9389_RS13260	COG3381	protein complex oligomerization
BADSM9389_RS13285	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BADSM9389_RS13290	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BADSM9389_RS13295	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BADSM9389_RS13300	COG1309	transcriptional regulator
BADSM9389_RS13310	COG1486	melibiose metabolic process
BADSM9389_RS13315	COG1917	Cupin 2, conserved barrel domain protein
BADSM9389_RS13315	COG2169	Transcriptional regulator
BADSM9389_RS13320	COG1447	Phosphotransferase system cellobiose-specific component IIA
BADSM9389_RS13325	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS13330	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS13335	COG1702	phosphate starvation-inducible protein PhoH
BADSM9389_RS13345	COG2822	iron ion transport
BADSM9389_RS13355	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BADSM9389_RS13360	COG0506	proline dehydrogenase activity
BADSM9389_RS13360	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BADSM9389_RS13360	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
BADSM9389_RS13370	COG1309	transcriptional regulator
BADSM9389_RS13405	COG2233	PERMEase
BADSM9389_RS13415	COG3729	General stress protein
BADSM9389_RS13420	COG0655	NAD(P)H dehydrogenase (quinone) activity
BADSM9389_RS13435	COG4221	oxidoreductase activity
BADSM9389_RS13455	COG0670	Belongs to the BI1 family
BADSM9389_RS13460	COG2920	part of a sulfur-relay system
BADSM9389_RS13465	COG1254	Belongs to the acylphosphatase family
BADSM9389_RS13470	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BADSM9389_RS13480	COG1832	CoA-binding protein
BADSM9389_RS13485	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
BADSM9389_RS13495	COG0210	DNA helicase
BADSM9389_RS13500	COG3304	Inner membrane component domain
BADSM9389_RS13505	COG1289	transmembrane transporter activity
BADSM9389_RS13510	COG3070	regulator of competence-specific genes
BADSM9389_RS13520	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BADSM9389_RS13520	COG2885	chlorophyll binding
BADSM9389_RS13530	COG1067	ATP-dependent peptidase activity
BADSM9389_RS13540	COG3130	regulation of translation
BADSM9389_RS13545	COG3009	Protein conserved in bacteria
BADSM9389_RS13550	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
BADSM9389_RS13550	COG3008	intermembrane lipid transfer
BADSM9389_RS13555	COG2995	paraquat-inducible protein a
BADSM9389_RS13560	COG0488	(ABC) transporter
BADSM9389_RS13570	COG0633	Ferredoxin
BADSM9389_RS13570	COG3217	Mosc domain protein beta barrel domain protein
BADSM9389_RS13585	COG0431	NADPH-dependent FMN reductase
BADSM9389_RS13590	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BADSM9389_RS13600	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BADSM9389_RS13610	COG0308	aminopeptidase N
BADSM9389_RS13615	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BADSM9389_RS13625	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BADSM9389_RS13630	COG1448	Aminotransferase
BADSM9389_RS13635	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BADSM9389_RS13640	COG3108	Peptidase M15
BADSM9389_RS13645	COG2989	Protein conserved in bacteria
BADSM9389_RS13655	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
BADSM9389_RS13665	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
BADSM9389_RS13670	COG1434	Gram-negative-bacterium-type cell wall biogenesis
BADSM9389_RS13675	COG3173	Aminoglycoside phosphotransferase
BADSM9389_RS13690	COG3214	Protein conserved in bacteria
BADSM9389_RS13705	COG2333	competence protein COMEC
BADSM9389_RS13705	COG0658	competence protein
BADSM9389_RS13710	COG0776	regulation of translation
BADSM9389_RS13715	COG0539	negative regulation of cytoplasmic translation
BADSM9389_RS13730	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BADSM9389_RS13735	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BADSM9389_RS13740	COG2323	membrane
BADSM9389_RS13745	COG1944	ATP diphosphatase activity
BADSM9389_RS13750	COG2116	formate transmembrane transporter activity
BADSM9389_RS13755	COG1882	Formate acetyltransferase
BADSM9389_RS13760	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BADSM9389_RS13765	COG0477	Major facilitator Superfamily
BADSM9389_RS13770	COG3302	dmso reductase anchor subunit
BADSM9389_RS13775	COG0437	4 iron, 4 sulfur cluster binding
BADSM9389_RS13780	COG0243	molybdopterin cofactor binding
BADSM9389_RS13790	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BADSM9389_RS13800	COG1674	ftsk spoiiie
BADSM9389_RS13800	COG1178	ABC-type Fe3 transport system permease component
BADSM9389_RS13810	COG0492	ferredoxin-NADP+ reductase activity
BADSM9389_RS13815	COG4988	ABC transporter
BADSM9389_RS13820	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BADSM9389_RS13830	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BADSM9389_RS13835	COG0542	response to heat
BADSM9389_RS13845	COG1278	Cold shock
BADSM9389_RS13855	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BADSM9389_RS13860	COG2990	Protein conserved in bacteria
BADSM9389_RS13865	COG3593	DNA synthesis involved in DNA repair
BADSM9389_RS13870	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BADSM9389_RS13875	COG2431	L-lysine efflux transmembrane transporter activity
BADSM9389_RS13880	COG1151	hydroxylamine reductase activity
BADSM9389_RS13885	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BADSM9389_RS13890	COG0028	Belongs to the TPP enzyme family
BADSM9389_RS13895	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
BADSM9389_RS13900	COG0702	epimerase
BADSM9389_RS13905	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BADSM9389_RS13910	COG3023	N-Acetylmuramoyl-L-alanine amidase
BADSM9389_RS13920	COG1126	abc transporter atp-binding protein
BADSM9389_RS13925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BADSM9389_RS13930	COG4215	(ABC) transporter
BADSM9389_RS13935	COG4160	amino acid transport
BADSM9389_RS13940	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BADSM9389_RS13950	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BADSM9389_RS13960	COG1177	transmembrane transport
BADSM9389_RS13965	COG1176	ABC-type spermidine putrescine transport system, permease component I
BADSM9389_RS13970	COG3842	ATPase activity
BADSM9389_RS13975	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
BADSM9389_RS13990	COG0583	DNA-binding transcription factor activity
BADSM9389_RS13995	COG2211	Major facilitator Superfamily
BADSM9389_RS14000	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BADSM9389_RS14035	COG3226	Transcriptional regulator
BADSM9389_RS14040	COG0738	Major facilitator superfamily
BADSM9389_RS14045	COG0561	phosphatase activity
BADSM9389_RS14050	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BADSM9389_RS14055	COG1321	iron dependent repressor
BADSM9389_RS14065	COG2194	sulfuric ester hydrolase activity
BADSM9389_RS14070	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BADSM9389_RS14085	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BADSM9389_RS14090	COG0765	amino acid transport
BADSM9389_RS14095	COG1126	abc transporter atp-binding protein
BADSM9389_RS14100	COG0668	transmembrane transport
BADSM9389_RS14110	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BADSM9389_RS14120	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
BADSM9389_RS14125	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BADSM9389_RS14135	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS14140	COG1446	asparaginase
BADSM9389_RS14145	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BADSM9389_RS14165	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BADSM9389_RS14175	COG2850	peptidyl-arginine hydroxylation
BADSM9389_RS14180	COG0789	Transcriptional regulator
BADSM9389_RS14185	COG1174	glycine betaine transport
BADSM9389_RS14190	COG1125	glycine betaine transport
BADSM9389_RS14195	COG1174	glycine betaine transport
BADSM9389_RS14200	COG1732	Glycine betaine
BADSM9389_RS14205	COG3501	Rhs element vgr protein
BADSM9389_RS14210	COG3179	chitinase
BADSM9389_RS14230	COG1472	Belongs to the glycosyl hydrolase 3 family
BADSM9389_RS14235	COG0277	FAD linked oxidase domain protein
BADSM9389_RS14245	COG1686	Belongs to the peptidase S11 family
BADSM9389_RS14260	COG0586	Pfam SNARE associated Golgi protein
BADSM9389_RS14265	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS14270	COG1538	Outer membrane efflux protein
BADSM9389_RS14285	COG2211	Major facilitator Superfamily
BADSM9389_RS14315	COG2723	6-phospho-beta-galactosidase activity
BADSM9389_RS14330	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BADSM9389_RS14335	COG0513	Belongs to the DEAD box helicase family
BADSM9389_RS14340	COG1309	transcriptional regulator
BADSM9389_RS14345	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BADSM9389_RS14350	COG1131	(ABC) transporter
BADSM9389_RS14355	COG0842	Transport permease protein
BADSM9389_RS14360	COG0842	Transport permease protein
BADSM9389_RS14370	COG3568	Endonuclease Exonuclease Phosphatase
BADSM9389_RS14375	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BADSM9389_RS14380	COG0392	lysyltransferase activity
BADSM9389_RS14385	COG0670	Belongs to the BI1 family
BADSM9389_RS14390	COG0314	molybdopterin synthase activity
BADSM9389_RS14395	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BADSM9389_RS14405	COG0521	Mo-molybdopterin cofactor biosynthetic process
BADSM9389_RS14440	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BADSM9389_RS14445	COG2226	methyltransferase
BADSM9389_RS14455	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BADSM9389_RS14470	COG1881	PFAM PEBP family protein
BADSM9389_RS14475	COG4677	pectinesterase activity
BADSM9389_RS14485	COG0561	phosphatase activity
BADSM9389_RS14495	COG4149	molybdate abc transporter
BADSM9389_RS14500	COG0725	ABC transporter, periplasmic molybdate-binding protein
BADSM9389_RS14505	COG2239	Acts as a magnesium transporter
BADSM9389_RS14510	COG4615	Cyclic peptide transporter
BADSM9389_RS14515	COG3145	DNA-N1-methyladenine dioxygenase activity
BADSM9389_RS14520	COG2169	Transcriptional regulator
BADSM9389_RS14520	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BADSM9389_RS14535	COG2198	Histidine kinase
BADSM9389_RS14535	COG0642	Histidine kinase
BADSM9389_RS14540	COG2197	response regulator
BADSM9389_RS14565	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BADSM9389_RS14575	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BADSM9389_RS14580	COG2271	Major facilitator Superfamily
BADSM9389_RS14585	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BADSM9389_RS14595	COG0247	lactate metabolic process
BADSM9389_RS14610	COG0642	Histidine kinase
BADSM9389_RS14635	COG0318	PFAM AMP-dependent synthetase and ligase
BADSM9389_RS14660	COG1169	isochorismate synthase
BADSM9389_RS14665	COG4575	ribosome binding
BADSM9389_RS14685	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
BADSM9389_RS14690	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
BADSM9389_RS14695	COG2205	protein histidine kinase activity
BADSM9389_RS14700	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS14705	COG0033	Phosphoglucomutase
BADSM9389_RS14715	COG0596	Alpha beta hydrolase
BADSM9389_RS14730	COG0735	belongs to the Fur family
BADSM9389_RS14750	COG2190	(PTS) system
BADSM9389_RS14750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS14750	COG1263	PTS System
BADSM9389_RS14760	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BADSM9389_RS14765	COG1846	Transcriptional regulator
BADSM9389_RS14765	COG1940	carbohydrate kinase activity
BADSM9389_RS14770	COG0647	UMP catabolic process
BADSM9389_RS14775	COG0367	asparagine synthase
BADSM9389_RS14810	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BADSM9389_RS14820	COG1702	phosphate starvation-inducible protein PhoH
BADSM9389_RS14825	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BADSM9389_RS14830	COG4535	Mg2 and Co2 transporter CorC
BADSM9389_RS14835	COG0815	Transfers the fatty acyl group on membrane lipoproteins
BADSM9389_RS14845	COG0765	amino acid transport
BADSM9389_RS14850	COG0765	amino acid transport
BADSM9389_RS14855	COG1126	abc transporter atp-binding protein
BADSM9389_RS14865	COG2888	peptidyl-tyrosine sulfation
BADSM9389_RS14880	COG1466	dna polymerase III delta subunit
BADSM9389_RS14890	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BADSM9389_RS14895	COG0406	alpha-ribazole phosphatase activity
BADSM9389_RS14900	COG0799	negative regulation of ribosome biogenesis
BADSM9389_RS14905	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BADSM9389_RS14910	COG0768	penicillin binding
BADSM9389_RS14915	COG0772	Belongs to the SEDS family
BADSM9389_RS14920	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BADSM9389_RS14925	COG1686	Belongs to the peptidase S11 family
BADSM9389_RS14930	COG2921	Belongs to the UPF0250 family
BADSM9389_RS14940	COG0583	DNA-binding transcription factor activity
BADSM9389_RS14955	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BADSM9389_RS14975	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BADSM9389_RS14980	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BADSM9389_RS14990	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BADSM9389_RS15000	COG3069	C4-dicarboxylate transmembrane transporter activity
BADSM9389_RS15005	COG4565	transcriptional regulatory protein
BADSM9389_RS15010	COG3290	protein histidine kinase activity
BADSM9389_RS15015	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
BADSM9389_RS15025	COG2301	Belongs to the HpcH HpaI aldolase family
BADSM9389_RS15030	COG3051	citrate lyase alpha subunit
BADSM9389_RS15045	COG0471	metal ion transport
BADSM9389_RS15050	COG3719	Belongs to the RNase T2 family
BADSM9389_RS15075	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BADSM9389_RS15080	COG1609	Transcriptional regulator
BADSM9389_RS15085	COG1263	PTS System
BADSM9389_RS15085	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS15085	COG2190	(PTS) system
BADSM9389_RS15090	COG1988	membrane-bound metal-dependent
BADSM9389_RS15095	COG2501	S4 domain
BADSM9389_RS15115	COG2211	Major facilitator Superfamily
BADSM9389_RS15130	COG3539	Fimbrial protein
BADSM9389_RS15145	COG3121	Chaperone
BADSM9389_RS15150	COG3539	Fimbrial protein
BADSM9389_RS15155	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BADSM9389_RS15160	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BADSM9389_RS15170	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BADSM9389_RS15175	COG1757	Na H antiporter
BADSM9389_RS15180	COG1609	Transcriptional regulator
BADSM9389_RS15195	COG0800	Aldolase
BADSM9389_RS15200	COG3734	2-keto-3-deoxy-galactonokinase
BADSM9389_RS15215	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
BADSM9389_RS15230	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS15235	COG1486	melibiose metabolic process
BADSM9389_RS15240	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS15245	COG4529	Protein conserved in bacteria
BADSM9389_RS15265	COG1566	PFAM secretion protein HlyD family protein
BADSM9389_RS15275	COG0628	permease
BADSM9389_RS15285	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BADSM9389_RS15315	COG0402	S-adenosylhomocysteine deaminase activity
BADSM9389_RS15320	COG0549	Belongs to the carbamate kinase family
BADSM9389_RS15330	COG1304	FMN binding
BADSM9389_RS15335	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BADSM9389_RS15345	COG0666	response to abiotic stimulus
BADSM9389_RS15350	COG0583	DNA-binding transcription factor activity
BADSM9389_RS15365	COG0583	DNA-binding transcription factor activity
BADSM9389_RS15375	COG0437	4 iron, 4 sulfur cluster binding
BADSM9389_RS15380	COG2864	formate dehydrogenase
BADSM9389_RS15390	COG0668	transmembrane transport
BADSM9389_RS15410	COG1064	alcohol dehydrogenase
BADSM9389_RS15430	COG2186	Transcriptional regulator
BADSM9389_RS15435	COG1304	FMN binding
BADSM9389_RS15440	COG1764	response to oxidative stress
BADSM9389_RS15450	COG1595	DNA-templated transcription, initiation
BADSM9389_RS15470	COG0440	acetolactate synthase activity
BADSM9389_RS15475	COG0028	Belongs to the TPP enzyme family
BADSM9389_RS15485	COG0523	cobalamin synthesis protein
BADSM9389_RS15490	COG2879	small protein
BADSM9389_RS15495	COG1966	Carbon starvation protein
BADSM9389_RS15505	COG1028	Short-chain dehydrogenase reductase Sdr
BADSM9389_RS15510	COG3433	isochorismatase activity
BADSM9389_RS15510	COG1535	isochorismatase
BADSM9389_RS15515	COG1021	2,3-dihydroxybenzoate-AMP ligase
BADSM9389_RS15520	COG1169	isochorismate synthase
BADSM9389_RS15525	COG4592	Periplasmic binding protein
BADSM9389_RS15535	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BADSM9389_RS15540	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BADSM9389_RS15545	COG1120	ATPase activity
BADSM9389_RS15550	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BADSM9389_RS15550	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BADSM9389_RS15555	COG3251	PFAM MbtH domain protein
BADSM9389_RS15560	COG2382	esterase
BADSM9389_RS15565	COG4771	TonB-dependent receptor
BADSM9389_RS15570	COG2977	Belongs to the P-Pant transferase superfamily
BADSM9389_RS15575	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BADSM9389_RS15590	COG3634	alkyl hydroperoxide reductase activity
BADSM9389_RS15610	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BADSM9389_RS15620	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BADSM9389_RS15625	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BADSM9389_RS15635	COG0549	Belongs to the carbamate kinase family
BADSM9389_RS15645	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BADSM9389_RS15650	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BADSM9389_RS15655	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BADSM9389_RS15660	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BADSM9389_RS15665	COG3257	ureidoglycine aminohydrolase activity
BADSM9389_RS15670	COG1929	Belongs to the glycerate kinase type-1 family
BADSM9389_RS15675	COG2233	PERMEase
BADSM9389_RS15685	COG1953	Uracil, thiamine, allantoin
BADSM9389_RS15690	COG2084	Dehydrogenase
BADSM9389_RS15695	COG3622	Belongs to the hyi family
BADSM9389_RS15700	COG3960	tartronate-semialdehyde synthase activity
BADSM9389_RS15720	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
BADSM9389_RS15725	COG4181	ATPase activity
BADSM9389_RS15730	COG2755	lipolytic protein G-D-S-L family
BADSM9389_RS15735	COG0300	oxidoreductase activity
BADSM9389_RS15740	COG3118	belongs to the thioredoxin family
BADSM9389_RS15745	COG0330	HflC and HflK could
BADSM9389_RS15750	COG1585	Membrane protein implicated in regulation of membrane protease activity
BADSM9389_RS15755	COG3501	Rhs element vgr protein
BADSM9389_RS15780	COG2217	Heavy metal translocating P-type atpase
BADSM9389_RS15785	COG3735	TraB family
BADSM9389_RS15790	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BADSM9389_RS15795	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
BADSM9389_RS15800	COG0737	Belongs to the 5'-nucleotidase family
BADSM9389_RS15805	COG2223	nitrite transmembrane transporter activity
BADSM9389_RS15810	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BADSM9389_RS15810	COG4651	solute:proton antiporter activity
BADSM9389_RS15815	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BADSM9389_RS15820	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
BADSM9389_RS15825	COG0563	adenylate kinase activity
BADSM9389_RS15840	COG1335	isochorismatase
BADSM9389_RS15850	COG0583	DNA-binding transcription factor activity
BADSM9389_RS15855	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BADSM9389_RS15865	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BADSM9389_RS15870	COG2832	Protein of unknown function (DUF454)
BADSM9389_RS15885	COG3264	Mechanosensitive ion channel
BADSM9389_RS15885	COG1196	nuclear chromosome segregation
BADSM9389_RS15890	COG1309	transcriptional regulator
BADSM9389_RS15895	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BADSM9389_RS15900	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BADSM9389_RS15915	COG0110	maltose O-acetyltransferase activity
BADSM9389_RS15925	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BADSM9389_RS15945	COG2011	ABC-type metal ion transport system permease component
BADSM9389_RS15950	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS15950	COG2190	(PTS) system
BADSM9389_RS15950	COG1263	PTS System
BADSM9389_RS15955	COG4948	Mandelate Racemase Muconate Lactonizing
BADSM9389_RS15960	COG2188	Transcriptional regulator
BADSM9389_RS15965	COG4943	cyclic-guanylate-specific phosphodiesterase activity
BADSM9389_RS15970	COG3604	Transcriptional regulator
BADSM9389_RS15985	COG5507	3-demethylubiquinone-9 3-methyltransferase
BADSM9389_RS15995	COG2364	Membrane
BADSM9389_RS16010	COG2015	COG2015, Alkyl sulfatase and related hydrolases
BADSM9389_RS16020	COG3695	enzyme binding
BADSM9389_RS16025	COG3126	Type III secretion system lipoprotein chaperone (YscW)
BADSM9389_RS16030	COG1946	Acyl-CoA thioesterase
BADSM9389_RS16035	COG0004	ammonium transporteR
BADSM9389_RS16040	COG0347	Belongs to the P(II) protein family
BADSM9389_RS16045	COG1132	(ABC) transporter
BADSM9389_RS16050	COG1132	(ABC) transporter
BADSM9389_RS16055	COG1522	sequence-specific DNA binding
BADSM9389_RS16065	COG0561	phosphatase activity
BADSM9389_RS16070	COG4533	DNA binding
BADSM9389_RS16075	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
BADSM9389_RS16080	COG0824	Thioesterase
BADSM9389_RS16085	COG1555	photosystem II stabilization
BADSM9389_RS16090	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BADSM9389_RS16095	COG0776	regulation of translation
BADSM9389_RS16100	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BADSM9389_RS16120	COG0271	Belongs to the BolA IbaG family
BADSM9389_RS16125	COG3056	Lipoprotein
BADSM9389_RS16130	COG2223	nitrite transmembrane transporter activity
BADSM9389_RS16135	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BADSM9389_RS16140	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BADSM9389_RS16145	COG1845	cytochrome c oxidase, subunit III
BADSM9389_RS16150	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BADSM9389_RS16155	COG0109	protoheme IX farnesyltransferase activity
BADSM9389_RS16160	COG2814	Major facilitator Superfamily
BADSM9389_RS16165	COG1666	GTP binding
BADSM9389_RS16170	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BADSM9389_RS16190	COG0142	geranyltranstransferase activity
BADSM9389_RS16200	COG0667	Aldo Keto reductase
BADSM9389_RS16205	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BADSM9389_RS16220	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BADSM9389_RS16225	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BADSM9389_RS16225	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BADSM9389_RS16235	COG4238	major outer membrane lipoprotein
BADSM9389_RS16240	COG3248	Nucleoside-binding outer membrane protein
BADSM9389_RS16245	COG1438	arginine binding
BADSM9389_RS16255	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BADSM9389_RS16265	COG1862	Preprotein translocase
BADSM9389_RS16270	COG0343	queuine tRNA-ribosyltransferase activity
BADSM9389_RS16275	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BADSM9389_RS16280	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
BADSM9389_RS16285	COG0450	alkyl hydroperoxide reductase
BADSM9389_RS16290	COG1574	metal-dependent hydrolase with the TIM-barrel fold
BADSM9389_RS16300	COG1335	isochorismatase
BADSM9389_RS16305	COG0366	Alpha amylase catalytic
BADSM9389_RS16320	COG1114	Component of the transport system for branched-chain amino acids
BADSM9389_RS16325	COG5002	protein histidine kinase activity
BADSM9389_RS16335	COG0420	3'-5' exonuclease activity
BADSM9389_RS16340	COG0419	ATPase involved in DNA repair
BADSM9389_RS16360	COG3501	Rhs element vgr protein
BADSM9389_RS16365	COG1940	carbohydrate kinase activity
BADSM9389_RS16380	COG4126	flavin adenine dinucleotide binding
BADSM9389_RS16395	COG1671	Belongs to the UPF0178 family
BADSM9389_RS16400	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BADSM9389_RS16405	COG3706	GGDEF domain
BADSM9389_RS16420	COG2814	Major facilitator Superfamily
BADSM9389_RS16430	COG1181	Belongs to the D-alanine--D-alanine ligase family
BADSM9389_RS16450	COG1846	Transcriptional regulator
BADSM9389_RS16455	COG1566	PFAM secretion protein HlyD family protein
BADSM9389_RS16460	COG2814	Major facilitator Superfamily
BADSM9389_RS16465	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
BADSM9389_RS16470	COG1335	isochorismatase
BADSM9389_RS16475	COG1560	Kdo2-lipid A biosynthetic process
BADSM9389_RS16480	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BADSM9389_RS16485	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BADSM9389_RS16495	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BADSM9389_RS16500	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BADSM9389_RS16505	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
BADSM9389_RS16520	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
BADSM9389_RS16525	COG2195	Cleaves the N-terminal amino acid of tripeptides
BADSM9389_RS16535	COG2991	Protein conserved in bacteria
BADSM9389_RS16545	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BADSM9389_RS16550	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BADSM9389_RS16555	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
BADSM9389_RS16570	COG3034	peptidoglycan biosynthetic process
BADSM9389_RS16575	COG0121	glutamine amidotransferase
BADSM9389_RS16585	COG1960	acyl-CoA dehydrogenase activity
BADSM9389_RS16590	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BADSM9389_RS16595	COG2351	hydroxyisourate hydrolase activity
BADSM9389_RS16605	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BADSM9389_RS16645	COG1953	Uracil, thiamine, allantoin
BADSM9389_RS16730	COG3157	Type VI secretion system effector, Hcp
BADSM9389_RS16765	COG2226	methyltransferase
BADSM9389_RS16775	COG0741	lytic transglycosylase activity
BADSM9389_RS16775	COG1388	LysM domain
BADSM9389_RS16780	COG2226	methyltransferase
BADSM9389_RS16785	COG3021	interspecies interaction between organisms
BADSM9389_RS16790	COG2814	Major facilitator Superfamily
BADSM9389_RS16795	COG0583	DNA-binding transcription factor activity
BADSM9389_RS16800	COG0656	L-ascorbic acid biosynthetic process
BADSM9389_RS16830	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
BADSM9389_RS16835	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BADSM9389_RS16840	COG2011	ABC-type metal ion transport system permease component
BADSM9389_RS16845	COG1464	Belongs to the NlpA lipoprotein family
BADSM9389_RS16855	COG1720	tRNA m6t6A37 methyltransferase activity
BADSM9389_RS16865	COG3015	lipoprotein NlpE involved in copper resistance
BADSM9389_RS16870	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BADSM9389_RS16885	COG4568	rho-dependent transcription termination
BADSM9389_RS16900	COG0346	lactoylglutathione lyase activity
BADSM9389_RS16935	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BADSM9389_RS16940	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
BADSM9389_RS16955	COG0750	zinc metalloprotease
BADSM9389_RS16960	COG0575	Belongs to the CDS family
BADSM9389_RS16970	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BADSM9389_RS16975	COG0233	cytoplasmic translational termination
BADSM9389_RS16990	COG0052	Belongs to the universal ribosomal protein uS2 family
BADSM9389_RS17015	COG3835	regulator
BADSM9389_RS17020	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BADSM9389_RS17025	COG0232	Belongs to the dGTPase family. Type 2 subfamily
BADSM9389_RS17040	COG2860	membrane
BADSM9389_RS17045	COG0316	Belongs to the HesB IscA family
BADSM9389_RS17060	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BADSM9389_RS17065	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BADSM9389_RS17070	COG1120	ATPase activity
BADSM9389_RS17075	COG4774	siderophore transport
BADSM9389_RS17080	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BADSM9389_RS17085	COG1643	Atp-dependent helicase
BADSM9389_RS17090	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BADSM9389_RS17105	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BADSM9389_RS17110	COG0617	tRNA 3'-terminal CCA addition
BADSM9389_RS17115	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BADSM9389_RS17135	COG0726	polysaccharide deacetylase
BADSM9389_RS17140	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS17145	COG0842	Transport permease protein
BADSM9389_RS17150	COG1131	(ABC) transporter
BADSM9389_RS17155	COG0288	reversible hydration of carbon dioxide
BADSM9389_RS17165	COG4993	Dehydrogenase
BADSM9389_RS17170	COG2132	Multicopper oxidase
BADSM9389_RS17185	COG0545	Peptidyl-prolyl cis-trans isomerase
BADSM9389_RS17200	COG3064	Membrane
BADSM9389_RS17210	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BADSM9389_RS17215	COG0508	dehydrogenase complex catalyzes the overall conversion of
BADSM9389_RS17220	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
BADSM9389_RS17235	COG2211	Major facilitator Superfamily
BADSM9389_RS17240	COG3940	Belongs to the glycosyl hydrolase 43 family
BADSM9389_RS17245	COG2211	Major facilitator Superfamily
BADSM9389_RS17255	COG3725	Membrane protein required for beta-lactamase induction
BADSM9389_RS17270	COG4969	Belongs to the N-Me-Phe pilin family
BADSM9389_RS17275	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BADSM9389_RS17280	COG1459	type II secretion system
BADSM9389_RS17305	COG0494	nUDIX hydrolase
BADSM9389_RS17330	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BADSM9389_RS17335	COG0849	cell division
BADSM9389_RS17360	COG0772	Belongs to the SEDS family
BADSM9389_RS17375	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BADSM9389_RS17380	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BADSM9389_RS17385	COG0768	penicillin binding
BADSM9389_RS17405	COG1609	Transcriptional regulator
BADSM9389_RS17415	COG0028	Belongs to the TPP enzyme family
BADSM9389_RS17430	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BADSM9389_RS17455	COG3171	Protein conserved in bacteria
BADSM9389_RS17465	COG1194	a g-specific adenine glycosylase
BADSM9389_RS17470	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
BADSM9389_RS17480	COG2211	Major facilitator Superfamily
BADSM9389_RS17485	COG1982	Orn Lys Arg decarboxylase major
BADSM9389_RS17510	COG0791	NLP P60 protein
BADSM9389_RS17530	COG1349	DNA-binding transcription factor activity
BADSM9389_RS17545	COG0848	biopolymer transport protein
BADSM9389_RS17555	COG0626	cystathionine gamma-synthase activity
BADSM9389_RS17560	COG0586	Pfam SNARE associated Golgi protein
BADSM9389_RS17570	COG2207	Transcriptional regulator
BADSM9389_RS17575	COG1979	alcohol dehydrogenase
BADSM9389_RS17580	COG0656	L-ascorbic acid biosynthetic process
BADSM9389_RS17585	COG1032	radical SAM domain protein
BADSM9389_RS17605	COG3111	PFAM Bacterial OB fold (BOF) protein
BADSM9389_RS17610	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS17615	COG0642	Histidine kinase
BADSM9389_RS17620	COG2249	NAD(P)H dehydrogenase (quinone) activity
BADSM9389_RS17625	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BADSM9389_RS17630	COG0583	DNA-binding transcription factor activity
BADSM9389_RS17640	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BADSM9389_RS17645	COG1737	Transcriptional regulator
BADSM9389_RS17650	COG2731	YhcH YjgK YiaL family protein
BADSM9389_RS17655	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BADSM9389_RS17670	COG0187	DNA topoisomerase II activity
BADSM9389_RS17675	COG3150	esterase
BADSM9389_RS17680	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BADSM9389_RS17685	COG3151	Protein conserved in bacteria
BADSM9389_RS17690	COG0494	nUDIX hydrolase
BADSM9389_RS17695	COG1538	Outer membrane efflux protein
BADSM9389_RS17705	COG0754	glutathionylspermidine amidase activity
BADSM9389_RS17710	COG3384	dioxygenase
BADSM9389_RS17725	COG2960	long-chain fatty acid transporting porin activity
BADSM9389_RS17740	COG3025	triphosphatase activity
BADSM9389_RS17745	COG4991	sh3 domain protein
BADSM9389_RS17755	COG0738	Major facilitator superfamily
BADSM9389_RS17760	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BADSM9389_RS17760	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS17760	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS17765	COG0383	alpha-mannosidase activity
BADSM9389_RS17770	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BADSM9389_RS17775	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BADSM9389_RS17790	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BADSM9389_RS17805	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BADSM9389_RS17810	COG0358	DNA primase activity
BADSM9389_RS17820	COG3663	DNA glycosylase
BADSM9389_RS17890	COG4974	Belongs to the 'phage' integrase family
BADSM9389_RS17920	COG2175	clavaminate synthase activity
BADSM9389_RS17925	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BADSM9389_RS17930	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
BADSM9389_RS17935	COG4521	taurine ABC transporter
BADSM9389_RS18045	COG1475	DNA binding
BADSM9389_RS18065	COG0582	viral genome integration into host DNA
BADSM9389_RS18075	COG0673	inositol 2-dehydrogenase activity
BADSM9389_RS18080	COG0861	Integral membrane protein TerC family
BADSM9389_RS18095	COG2721	sulfolactate sulfo-lyase activity
BADSM9389_RS18105	COG2271	Major facilitator Superfamily
BADSM9389_RS18110	COG2186	Transcriptional regulator
BADSM9389_RS18115	COG0586	Pfam SNARE associated Golgi protein
BADSM9389_RS18125	COG1422	Protein of unknown function (DUF1090)
BADSM9389_RS18130	COG4575	ribosome binding
BADSM9389_RS18135	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
BADSM9389_RS18145	COG2259	Doxx family
BADSM9389_RS18150	COG0435	Glutathione S-transferase
BADSM9389_RS18155	COG3152	Membrane
BADSM9389_RS18160	COG0583	DNA-binding transcription factor activity
BADSM9389_RS18165	COG1741	Belongs to the pirin family
BADSM9389_RS18180	COG0814	amino acid
BADSM9389_RS18185	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BADSM9389_RS18195	COG1929	Belongs to the glycerate kinase type-1 family
BADSM9389_RS18200	COG2084	Dehydrogenase
BADSM9389_RS18210	COG2271	Major facilitator Superfamily
BADSM9389_RS18215	COG2721	sulfolactate sulfo-lyase activity
BADSM9389_RS18225	COG2814	Major facilitator Superfamily
BADSM9389_RS18230	COG1349	DNA-binding transcription factor activity
BADSM9389_RS18240	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BADSM9389_RS18250	COG3716	PTS system mannose fructose sorbose family IID component
BADSM9389_RS18255	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS18260	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BADSM9389_RS18265	COG2222	sugar isomerase
BADSM9389_RS18270	COG0191	fructose-bisphosphate aldolase activity
BADSM9389_RS18285	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BADSM9389_RS18295	COG0792	nuclease activity
BADSM9389_RS18300	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
BADSM9389_RS18305	COG2823	Periplasmic or secreted lipoprotein
BADSM9389_RS18310	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS18310	COG3711	transcriptional antiterminator
BADSM9389_RS18330	COG3964	amidohydrolase
BADSM9389_RS18410	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BADSM9389_RS18420	COG0679	Auxin Efflux Carrier
BADSM9389_RS18455	COG3041	Addiction module toxin RelE StbE family
BADSM9389_RS18465	COG3783	Cytochrome b(562)
BADSM9389_RS18470	COG0312	modulator of DNA gyrase
BADSM9389_RS18475	COG3028	Belongs to the UPF0307 family
BADSM9389_RS18480	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BADSM9389_RS18495	COG1172	Belongs to the binding-protein-dependent transport system permease family
BADSM9389_RS18500	COG1172	Belongs to the binding-protein-dependent transport system permease family
BADSM9389_RS18505	COG1129	ABC transporter
BADSM9389_RS18510	COG1879	ABC-type sugar transport system periplasmic component
BADSM9389_RS18515	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
BADSM9389_RS18520	COG2105	PFAM AIG2 family protein
BADSM9389_RS18525	COG2911	Protein conserved in bacteria
BADSM9389_RS18530	COG0729	surface antigen
BADSM9389_RS18555	COG2217	Heavy metal translocating P-type atpase
BADSM9389_RS18560	COG1253	flavin adenine dinucleotide binding
BADSM9389_RS18570	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
BADSM9389_RS18575	COG1218	3'(2'),5'-bisphosphate nucleotidase
BADSM9389_RS18585	COG1733	regulation of RNA biosynthetic process
BADSM9389_RS18590	COG0702	epimerase
BADSM9389_RS18600	COG0697	spore germination
BADSM9389_RS18610	COG1113	amino acid transport
BADSM9389_RS18615	COG0545	Peptidyl-prolyl cis-trans isomerase
BADSM9389_RS18620	COG3061	Opacity-associated protein A
BADSM9389_RS18630	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BADSM9389_RS18635	COG2965	DNA replication, synthesis of RNA primer
BADSM9389_RS18650	COG1073	alpha beta
BADSM9389_RS18655	COG3650	response to hydrogen peroxide
BADSM9389_RS18665	COG1960	acyl-CoA dehydrogenase activity
BADSM9389_RS18670	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BADSM9389_RS18675	COG0557	exoribonuclease II activity
BADSM9389_RS18685	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BADSM9389_RS18690	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
BADSM9389_RS18695	COG0330	HflC and HflK could
BADSM9389_RS18700	COG0330	HflC and HflK could
BADSM9389_RS18705	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BADSM9389_RS18710	COG1923	regulation of RNA biosynthetic process
BADSM9389_RS18715	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BADSM9389_RS18725	COG0860	N-Acetylmuramoyl-L-alanine amidase
BADSM9389_RS18730	COG0802	atpase or kinase
BADSM9389_RS18735	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BADSM9389_RS18735	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BADSM9389_RS18740	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BADSM9389_RS18775	COG3264	Mechanosensitive ion channel
BADSM9389_RS18775	COG1511	domain protein
BADSM9389_RS18790	COG1053	succinate dehydrogenase
BADSM9389_RS18795	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BADSM9389_RS18820	COG2076	Multidrug Resistance protein
BADSM9389_RS18830	COG5510	response to toxic substance
BADSM9389_RS18835	COG5510	response to toxic substance
BADSM9389_RS18845	COG1509	lysine 2,3-aminomutase activity
BADSM9389_RS18855	COG0459	protein refolding
BADSM9389_RS18860	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BADSM9389_RS18865	COG3030	protein affecting phage T7 exclusion by the F plasmid
BADSM9389_RS18870	COG1027	Aspartate ammonia-lyase
BADSM9389_RS18875	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
BADSM9389_RS18890	COG1309	transcriptional regulator
BADSM9389_RS18900	COG0454	-acetyltransferase
BADSM9389_RS18935	COG5001	Diguanylate cyclase
BADSM9389_RS18935	COG2203	Gaf domain
BADSM9389_RS18935	COG3706	GGDEF domain
BADSM9389_RS18935	COG4251	negative regulation of phosphorylation
BADSM9389_RS18940	COG3119	arylsulfatase activity
BADSM9389_RS18945	COG0641	radical SAM
BADSM9389_RS18950	COG0714	Associated with various cellular activities
BADSM9389_RS18985	COG1278	Cold shock
BADSM9389_RS18990	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BADSM9389_RS18995	COG2271	Major facilitator Superfamily
BADSM9389_RS19005	COG0625	glutathione transferase activity
BADSM9389_RS19025	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
BADSM9389_RS19025	COG2885	chlorophyll binding
BADSM9389_RS19040	COG1566	PFAM secretion protein HlyD family protein
BADSM9389_RS19050	COG5001	Diguanylate cyclase
BADSM9389_RS19060	COG0697	spore germination
BADSM9389_RS19065	COG0531	amino acid
BADSM9389_RS19070	COG0076	glutamate decarboxylase activity
BADSM9389_RS19085	COG2198	Histidine kinase
BADSM9389_RS19085	COG2205	protein histidine kinase activity
BADSM9389_RS19085	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BADSM9389_RS19085	COG0784	Response regulator, receiver
BADSM9389_RS19090	COG2197	response regulator
BADSM9389_RS19095	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS19100	COG2723	6-phospho-beta-galactosidase activity
BADSM9389_RS19115	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BADSM9389_RS19120	COG2824	Alkylphosphonate utilization operon protein PhnA
BADSM9389_RS19125	COG2764	glyoxalase bleomycin resistance protein dioxygenase
BADSM9389_RS19140	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
BADSM9389_RS19145	COG3639	organic phosphonate transmembrane transporter activity
BADSM9389_RS19150	COG2188	Transcriptional regulator
BADSM9389_RS19155	COG3624	Phosphonate C-P lyase system protein PhnG
BADSM9389_RS19160	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
BADSM9389_RS19165	COG3626	phosphonate metabolism
BADSM9389_RS19170	COG3627	carbon phosphorus lyase activity
BADSM9389_RS19175	COG4107	phosphonate C-P lyase system protein PhnK
BADSM9389_RS19180	COG4778	phosphonate C-P lyase system protein PhnL
BADSM9389_RS19185	COG3454	Phosphonate metabolism
BADSM9389_RS19190	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
BADSM9389_RS19195	COG0456	acetyltransferase
BADSM9389_RS19200	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BADSM9389_RS19205	COG1943	Transposase
BADSM9389_RS19210	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
BADSM9389_RS19240	COG0527	aspartate kinase activity
BADSM9389_RS19270	COG0750	zinc metalloprotease
BADSM9389_RS19275	COG4191	Histidine kinase
BADSM9389_RS19275	COG0784	Response regulator, receiver
BADSM9389_RS19295	COG1172	Belongs to the binding-protein-dependent transport system permease family
BADSM9389_RS19325	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS19340	COG3162	membrane
BADSM9389_RS19350	COG0673	inositol 2-dehydrogenase activity
BADSM9389_RS19355	COG1346	cytolysis
BADSM9389_RS19360	COG1380	Effector of murein hydrolase LrgA
BADSM9389_RS19365	COG0583	DNA-binding transcription factor activity
BADSM9389_RS19370	COG0025	NhaP-type Na H and K H
BADSM9389_RS19375	COG2252	PERMEase
BADSM9389_RS19385	COG0789	Transcriptional regulator
BADSM9389_RS19400	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BADSM9389_RS19405	COG1473	amidohydrolase
BADSM9389_RS19410	COG0629	single-stranded DNA binding
BADSM9389_RS19415	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BADSM9389_RS19430	COG2315	Protein conserved in bacteria
BADSM9389_RS19435	COG3700	Belongs to the class B bacterial acid phosphatase family
BADSM9389_RS19440	COG1448	Aminotransferase
BADSM9389_RS19460	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BADSM9389_RS19475	COG0735	belongs to the Fur family
BADSM9389_RS19480	COG3237	CsbD-like
BADSM9389_RS19485	COG0534	Mate efflux family protein
BADSM9389_RS19495	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BADSM9389_RS19530	COG2182	Extracellular solute-binding protein
BADSM9389_RS19555	COG1187	pseudouridine synthase activity
BADSM9389_RS19565	COG1283	sodium-dependent phosphate transmembrane transporter activity
BADSM9389_RS19570	COG1410	methionine synthase
BADSM9389_RS19570	COG0646	methionine synthase
BADSM9389_RS19590	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BADSM9389_RS19625	COG0151	Belongs to the GarS family
BADSM9389_RS19660	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
BADSM9389_RS19675	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BADSM9389_RS19680	COG2104	thiamine diphosphate biosynthetic process
BADSM9389_RS19685	COG2022	thiamine diphosphate biosynthetic process
BADSM9389_RS19695	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BADSM9389_RS19700	COG2188	Transcriptional regulator
BADSM9389_RS19705	COG1486	melibiose metabolic process
BADSM9389_RS19710	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BADSM9389_RS19720	COG1447	Phosphotransferase system cellobiose-specific component IIA
BADSM9389_RS19725	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BADSM9389_RS19730	COG0085	RNA polymerase activity
BADSM9389_RS19745	COG0081	regulation of translation
BADSM9389_RS19755	COG0250	Participates in transcription elongation, termination and antitermination
BADSM9389_RS19765	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BADSM9389_RS19800	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BADSM9389_RS19825	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
BADSM9389_RS19835	COG1739	Uncharacterized protein family UPF0029
BADSM9389_RS19860	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BADSM9389_RS19880	COG0805	protein transport
BADSM9389_RS19895	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
BADSM9389_RS19910	COG1322	Protein conserved in bacteria
BADSM9389_RS19920	COG0412	Dienelactone hydrolase
BADSM9389_RS19950	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BADSM9389_RS19955	COG0583	DNA-binding transcription factor activity
BADSM9389_RS19965	COG0561	phosphatase activity
BADSM9389_RS19970	COG2267	carboxylic ester hydrolase activity
BADSM9389_RS19975	COG1280	lysine exporter protein (LysE YggA)
BADSM9389_RS19980	COG1280	lysine exporter protein (LysE YggA)
BADSM9389_RS19990	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
BADSM9389_RS20005	COG0598	Magnesium transport protein CorA
BADSM9389_RS20015	COG1011	Hydrolase
BADSM9389_RS20050	COG0181	hydroxymethylbilane synthase activity
BADSM9389_RS20060	COG2959	enzyme of heme biosynthesis
BADSM9389_RS20065	COG3071	HemY protein
BADSM9389_RS20110	COG2244	polysaccharide biosynthetic process
BADSM9389_RS20115	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BADSM9389_RS20120	COG0456	acetyltransferase
BADSM9389_RS20125	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
BADSM9389_RS20130	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BADSM9389_RS20135	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
BADSM9389_RS20140	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BADSM9389_RS20145	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BADSM9389_RS20150	COG3118	belongs to the thioredoxin family
BADSM9389_RS20175	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BADSM9389_RS20180	COG0583	DNA-binding transcription factor activity
BADSM9389_RS20185	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BADSM9389_RS20200	COG3978	acetolactate synthase activity
BADSM9389_RS20225	COG3085	chromosome segregation
BADSM9389_RS20270	COG4206	TonB-dependent receptor
BADSM9389_RS20285	COG1309	transcriptional regulator
BADSM9389_RS20290	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BADSM9389_RS20295	COG0583	DNA-binding transcription factor activity
BADSM9389_RS20315	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BADSM9389_RS20330	COG2194	sulfuric ester hydrolase activity
BADSM9389_RS20335	COG2207	Transcriptional regulator
BADSM9389_RS20340	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BADSM9389_RS20345	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BADSM9389_RS20350	COG1882	Formate acetyltransferase
BADSM9389_RS20355	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BADSM9389_RS20360	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BADSM9389_RS20365	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS20365	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS20365	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BADSM9389_RS20375	COG0371	Dehydrogenase
BADSM9389_RS20380	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
BADSM9389_RS20385	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BADSM9389_RS20390	COG0527	aspartate kinase activity
BADSM9389_RS20390	COG0460	homoserine dehydrogenase
BADSM9389_RS20395	COG0626	cystathionine gamma-synthase activity
BADSM9389_RS20400	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
BADSM9389_RS20405	COG0254	rRNA binding
BADSM9389_RS20410	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BADSM9389_RS20415	COG1609	Transcriptional regulator
BADSM9389_RS20420	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BADSM9389_RS20425	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BADSM9389_RS20435	COG1575	Belongs to the MenA family. Type 1 subfamily
BADSM9389_RS20445	COG3074	FtsZ-dependent cytokinesis
BADSM9389_RS20450	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BADSM9389_RS20460	COG1494	fructose-1,6-bisphosphatase
BADSM9389_RS20470	COG3152	Membrane
BADSM9389_RS20480	COG0149	triose-phosphate isomerase activity
BADSM9389_RS20490	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
BADSM9389_RS20495	COG0205	6-phosphofructokinase activity
BADSM9389_RS20505	COG3678	ATP-independent chaperone mediated protein folding
BADSM9389_RS20510	COG0745	RESPONSE REGULATOR receiver
BADSM9389_RS20515	COG2205	protein histidine kinase activity
BADSM9389_RS20520	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BADSM9389_RS20525	COG1045	serine acetyltransferase
BADSM9389_RS20540	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
BADSM9389_RS20545	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BADSM9389_RS20555	COG4942	peptidase
BADSM9389_RS20560	COG2861	carbohydrate metabolic process
BADSM9389_RS20565	COG1216	Glycosyl transferase, family 2
BADSM9389_RS20585	COG0859	PFAM glycosyl transferase family 9
BADSM9389_RS20590	COG0859	PFAM glycosyl transferase family 9
BADSM9389_RS20620	COG0438	transferase activity, transferring glycosyl groups
BADSM9389_RS20625	COG0515	serine threonine protein kinase
BADSM9389_RS20630	COG0438	transferase activity, transferring glycosyl groups
BADSM9389_RS20635	COG0859	PFAM glycosyl transferase family 9
BADSM9389_RS20640	COG1519	Transferase
BADSM9389_RS20660	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BADSM9389_RS20670	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BADSM9389_RS20695	COG1561	YicC-like family, N-terminal region
BADSM9389_RS20700	COG2860	membrane
BADSM9389_RS20715	COG1758	RNA polymerase activity
BADSM9389_RS20720	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BADSM9389_RS20725	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BADSM9389_RS20730	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BADSM9389_RS20735	COG0786	glutamate:sodium symporter activity
BADSM9389_RS20740	COG2233	PERMEase
BADSM9389_RS20745	COG2982	Protein involved in outer membrane biogenesis
BADSM9389_RS20750	COG0456	acetyltransferase
BADSM9389_RS20765	COG1011	Hydrolase
BADSM9389_RS20770	COG1349	DNA-binding transcription factor activity
BADSM9389_RS20775	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BADSM9389_RS20780	COG2084	Dehydrogenase
BADSM9389_RS20785	COG3684	Belongs to the aldolase LacD family
BADSM9389_RS20795	COG1501	Belongs to the glycosyl hydrolase 31 family
BADSM9389_RS20800	COG2211	Major facilitator Superfamily
BADSM9389_RS20815	COG0174	glutamine synthetase
BADSM9389_RS20820	COG3852	Histidine kinase
BADSM9389_RS20830	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BADSM9389_RS20840	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BADSM9389_RS20850	COG0204	Acyl-transferase
BADSM9389_RS20865	COG3084	Protein conserved in bacteria
BADSM9389_RS20870	COG0746	molybdenum cofactor guanylyltransferase activity
BADSM9389_RS20875	COG1763	Mo-molybdopterin cofactor biosynthetic process
BADSM9389_RS20905	COG2186	Transcriptional regulator
BADSM9389_RS20910	COG0477	Major facilitator Superfamily
BADSM9389_RS20915	COG1609	Transcriptional regulator
BADSM9389_RS20920	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BADSM9389_RS20930	COG1172	Belongs to the binding-protein-dependent transport system permease family
BADSM9389_RS20935	COG1129	ABC transporter
BADSM9389_RS20960	COG2502	aspartate--ammonia ligase
BADSM9389_RS20965	COG1522	sequence-specific DNA binding
BADSM9389_RS20970	COG0716	FMN binding
BADSM9389_RS20985	COG3312	ion transport
BADSM9389_RS21040	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BADSM9389_RS21045	COG2271	Major facilitator Superfamily
BADSM9389_RS21055	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BADSM9389_RS21060	COG0573	inorganic phosphate transmembrane transporter activity
BADSM9389_RS21065	COG0581	inorganic phosphate transmembrane transporter activity
BADSM9389_RS21070	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BADSM9389_RS21075	COG0704	Plays a role in the regulation of phosphate uptake
BADSM9389_RS21080	COG3037	sugar-specific permease SgaT UlaA
BADSM9389_RS21090	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BADSM9389_RS21100	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BADSM9389_RS21105	COG2252	PERMEase
BADSM9389_RS21120	COG1309	transcriptional regulator
BADSM9389_RS21125	COG0431	NADPH-dependent FMN reductase
BADSM9389_RS21130	COG2091	lysine biosynthetic process via aminoadipic acid
BADSM9389_RS21135	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
BADSM9389_RS21140	COG0583	DNA-binding transcription factor activity
BADSM9389_RS21150	COG0706	membrane insertase activity
BADSM9389_RS21155	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BADSM9389_RS21165	COG0230	Belongs to the bacterial ribosomal protein bL34 family