locus-tag class description JYK05_RS00005 PF00308 Bacterial dnaA protein JYK05_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JYK05_RS00005 PF11638 DnaA N-terminal domain JYK05_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JYK05_RS00010 PF02767 DNA polymerase III beta subunit, central domain JYK05_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JYK05_RS00015 PF00204 DNA gyrase B JYK05_RS00015 PF01751 Toprim domain JYK05_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS00015 PF18053 DNA gyrase B subunit insert domain JYK05_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus JYK05_RS00025 PF03880 DbpA RNA binding domain JYK05_RS00025 PF00270 DEAD/DEAH box helicase JYK05_RS00025 PF00271 Helicase conserved C-terminal domain JYK05_RS00030 PF07690 Major Facilitator Superfamily JYK05_RS00070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYK05_RS00070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK05_RS00075 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain JYK05_RS00075 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain JYK05_RS00080 PF03466 LysR substrate binding domain JYK05_RS00080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS00085 PF01751 Toprim domain JYK05_RS00085 PF01131 DNA topoisomerase JYK05_RS00095 PF17782 DprA winged helix domain JYK05_RS00095 PF02481 DNA recombination-mediator protein A JYK05_RS00100 PF01327 Polypeptide deformylase JYK05_RS00105 PF00551 Formyl transferase JYK05_RS00105 PF02911 Formyl transferase, C-terminal domain JYK05_RS00110 PF01810 LysE type translocator JYK05_RS00115 PF01435 Peptidase family M48 JYK05_RS00120 PF01189 16S rRNA methyltransferase RsmB/F JYK05_RS00120 PF01029 NusB family JYK05_RS00130 PF00989 PAS fold JYK05_RS00130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS00130 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS00130 PF00672 HAMP domain JYK05_RS00135 PF00072 Response regulator receiver domain JYK05_RS00135 PF00158 Sigma-54 interaction domain JYK05_RS00135 PF02954 Bacterial regulatory protein, Fis family JYK05_RS00145 PF06508 Queuosine biosynthesis protein QueC JYK05_RS00155 PF01242 6-pyruvoyl tetrahydropterin synthase JYK05_RS00160 PF03328 HpcH/HpaI aldolase/citrate lyase family JYK05_RS00170 PF01098 Cell cycle protein JYK05_RS00175 PF03717 Penicillin-binding Protein dimerisation domain JYK05_RS00175 PF00905 Penicillin binding protein transpeptidase domain JYK05_RS00185 PF04085 rod shape-determining protein MreC JYK05_RS00195 PF02686 Glu-tRNAGln amidotransferase C subunit JYK05_RS00200 PF01425 Amidase JYK05_RS00205 PF02934 GatB/GatE catalytic domain JYK05_RS00205 PF02637 GatB domain JYK05_RS00210 PF03976 Polyphosphate kinase 2 (PPK2) JYK05_RS00215 PF03372 Endonuclease/Exonuclease/phosphatase family JYK05_RS00225 PF07690 Major Facilitator Superfamily JYK05_RS00235 PF00561 alpha/beta hydrolase fold JYK05_RS00255 PF00696 Amino acid kinase family JYK05_RS00265 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS00265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS00270 PF00072 Response regulator receiver domain JYK05_RS00275 PF00672 HAMP domain JYK05_RS00275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS00275 PF02203 Tar ligand binding domain homologue JYK05_RS00280 PF00860 Permease family JYK05_RS00285 PF00999 Sodium/hydrogen exchanger family JYK05_RS00290 PF00563 EAL domain JYK05_RS00290 PF05231 MASE1 JYK05_RS00300 PF02798 Glutathione S-transferase, N-terminal domain JYK05_RS00315 PF00294 pfkB family carbohydrate kinase JYK05_RS00325 PF00356 Bacterial regulatory proteins, lacI family JYK05_RS00335 PF13593 SBF-like CPA transporter family (DUF4137) JYK05_RS00345 PF13609 Gram-negative porin JYK05_RS00355 PF00561 alpha/beta hydrolase fold JYK05_RS00360 PF00753 Metallo-beta-lactamase superfamily JYK05_RS00375 PF00682 HMGL-like JYK05_RS00380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK05_RS00400 PF04055 Radical SAM superfamily JYK05_RS00400 PF06968 Biotin and Thiamin Synthesis associated domain JYK05_RS00410 PF00155 Aminotransferase class I and II JYK05_RS00415 PF00202 Aminotransferase class-III JYK05_RS00440 PF00106 short chain dehydrogenase JYK05_RS00445 PF00108 Thiolase, N-terminal domain JYK05_RS00445 PF02803 Thiolase, C-terminal domain JYK05_RS00455 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JYK05_RS00460 PF13411 MerR HTH family regulatory protein JYK05_RS00470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK05_RS00490 PF00700 Bacterial flagellin C-terminal helical region JYK05_RS00490 PF00669 Bacterial flagellin N-terminal helical region JYK05_RS00500 PF00248 Aldo/keto reductase family JYK05_RS00505 PF01165 Ribosomal protein S21 JYK05_RS00520 PF03352 Methyladenine glycosylase JYK05_RS00540 PF00230 Major intrinsic protein JYK05_RS00545 PF00534 Glycosyl transferases group 1 JYK05_RS00545 PF13439 Glycosyltransferase Family 4 JYK05_RS00550 PF05247 Flagellar transcriptional activator (FlhD) JYK05_RS00555 PF01618 MotA/TolQ/ExbB proton channel family JYK05_RS00560 PF00691 OmpA family JYK05_RS00560 PF13677 Membrane MotB of proton-channel complex MotA/MotB JYK05_RS00570 PF02895 Signal transducing histidine kinase, homodimeric domain JYK05_RS00570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS00570 PF01627 Hpt domain JYK05_RS00570 PF01584 CheW-like domain JYK05_RS00570 PF09078 CheY binding JYK05_RS00575 PF01584 CheW-like domain JYK05_RS00580 PF00672 HAMP domain JYK05_RS00580 PF02203 Tar ligand binding domain homologue JYK05_RS00580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS00585 PF03705 CheR methyltransferase, all-alpha domain JYK05_RS00585 PF01739 CheR methyltransferase, SAM binding domain JYK05_RS00590 PF03975 CheD chemotactic sensory transduction JYK05_RS00595 PF01339 CheB methylesterase JYK05_RS00595 PF00072 Response regulator receiver domain JYK05_RS00600 PF00072 Response regulator receiver domain JYK05_RS00605 PF04344 Chemotaxis phosphatase, CheZ JYK05_RS00625 PF13462 Thioredoxin JYK05_RS00635 PF00750 tRNA synthetases class I (R) JYK05_RS00635 PF05746 DALR anticodon binding domain JYK05_RS00635 PF03485 Arginyl tRNA synthetase N terminal domain JYK05_RS00650 PF02965 Vitamin B12 dependent methionine synthase, activation domain JYK05_RS00650 PF00809 Pterin binding enzyme JYK05_RS00650 PF02574 Homocysteine S-methyltransferase JYK05_RS00650 PF02607 B12 binding domain JYK05_RS00650 PF02310 B12 binding domain JYK05_RS00655 PF02607 B12 binding domain JYK05_RS00655 PF02965 Vitamin B12 dependent methionine synthase, activation domain JYK05_RS00655 PF02574 Homocysteine S-methyltransferase JYK05_RS00655 PF02310 B12 binding domain JYK05_RS00655 PF00809 Pterin binding enzyme JYK05_RS00660 PF12091 Protein of unknown function (DUF3567) JYK05_RS00665 PF00561 alpha/beta hydrolase fold JYK05_RS00690 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS00700 PF13411 MerR HTH family regulatory protein JYK05_RS00700 PF02310 B12 binding domain JYK05_RS00710 PF01467 Cytidylyltransferase-like JYK05_RS00720 PF03309 Type III pantothenate kinase JYK05_RS00725 PF02237 Biotin protein ligase C terminal domain JYK05_RS00725 PF03099 Biotin/lipoate A/B protein ligase family JYK05_RS00730 PF02405 Permease MlaE JYK05_RS00735 PF00005 ABC transporter JYK05_RS00765 PF07943 Penicillin-binding protein 5, C-terminal domain JYK05_RS00765 PF00768 D-alanyl-D-alanine carboxypeptidase JYK05_RS00770 PF01063 Amino-transferase class IV JYK05_RS00775 PF04359 Protein of unknown function (DUF493) JYK05_RS00780 PF03466 LysR substrate binding domain JYK05_RS00780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS00790 PF03099 Biotin/lipoate A/B protein ligase family JYK05_RS00795 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JYK05_RS00795 PF04055 Radical SAM superfamily JYK05_RS00800 PF00375 Sodium:dicarboxylate symporter family JYK05_RS00805 PF02743 Cache domain JYK05_RS00805 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS00805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS00810 PF02954 Bacterial regulatory protein, Fis family JYK05_RS00810 PF00158 Sigma-54 interaction domain JYK05_RS00810 PF00072 Response regulator receiver domain JYK05_RS00815 PF00578 AhpC/TSA family JYK05_RS00825 PF01078 Magnesium chelatase, subunit ChlI JYK05_RS00825 PF13335 Magnesium chelatase, subunit ChlI C-terminal JYK05_RS00830 PF04380 Membrane fusogenic activity JYK05_RS00835 PF00543 Nitrogen regulatory protein P-II JYK05_RS00840 PF00909 Ammonium Transporter Family JYK05_RS00850 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JYK05_RS00850 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JYK05_RS00860 PF00381 PTS HPr component phosphorylation site JYK05_RS00865 PF00391 PEP-utilising enzyme, mobile domain JYK05_RS00865 PF05524 PEP-utilising enzyme, N-terminal JYK05_RS00865 PF02896 PEP-utilising enzyme, TIM barrel domain JYK05_RS00870 PF00899 ThiF family JYK05_RS00875 PF13180 PDZ domain JYK05_RS00875 PF03572 Peptidase family S41 JYK05_RS00880 PF00300 Histidine phosphatase superfamily (branch 1) JYK05_RS00885 PF00581 Rhodanese-like domain JYK05_RS00890 PF00462 Glutaredoxin JYK05_RS00895 PF02556 Preprotein translocase subunit SecB JYK05_RS00900 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JYK05_RS00900 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JYK05_RS00905 PF01661 Macro domain JYK05_RS00910 PF00588 SpoU rRNA Methylase family JYK05_RS00915 PF00156 Phosphoribosyl transferase domain JYK05_RS00920 PF08241 Methyltransferase domain JYK05_RS00930 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JYK05_RS00930 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JYK05_RS00935 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYK05_RS00945 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JYK05_RS00955 PF00510 Cytochrome c oxidase subunit III JYK05_RS00975 PF02628 Cytochrome oxidase assembly protein JYK05_RS00980 PF01040 UbiA prenyltransferase family JYK05_RS00985 PF02630 SCO1/SenC JYK05_RS00995 PF03180 NLPA lipoprotein JYK05_RS01000 PF01047 MarR family JYK05_RS01000 PF00583 Acetyltransferase (GNAT) family JYK05_RS01005 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS01005 PF07702 UTRA domain JYK05_RS01010 PF01979 Amidohydrolase family JYK05_RS01015 PF01380 SIS domain JYK05_RS01020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYK05_RS01020 PF05524 PEP-utilising enzyme, N-terminal JYK05_RS01020 PF00381 PTS HPr component phosphorylation site JYK05_RS01020 PF02896 PEP-utilising enzyme, TIM barrel domain JYK05_RS01020 PF00391 PEP-utilising enzyme, mobile domain JYK05_RS01025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JYK05_RS01025 PF00367 phosphotransferase system, EIIB JYK05_RS01025 PF02378 Phosphotransferase system, EIIC JYK05_RS01030 PF00140 Sigma-70 factor, region 1.2 JYK05_RS01030 PF04545 Sigma-70, region 4 JYK05_RS01030 PF04542 Sigma-70 region 2 JYK05_RS01045 PF00682 HMGL-like JYK05_RS01045 PF08502 LeuA allosteric (dimerisation) domain JYK05_RS01050 PF02885 Glycosyl transferase family, helical bundle domain JYK05_RS01055 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYK05_RS01060 PF14497 Glutathione S-transferase, C-terminal domain JYK05_RS01060 PF02798 Glutathione S-transferase, N-terminal domain JYK05_RS01065 PF01810 LysE type translocator JYK05_RS01070 PF00448 SRP54-type protein, GTPase domain JYK05_RS01070 PF02881 SRP54-type protein, helical bundle domain JYK05_RS01080 PF01467 Cytidylyltransferase-like JYK05_RS01100 PF00037 4Fe-4S binding domain JYK05_RS01105 PF00155 Aminotransferase class I and II JYK05_RS01110 PF01195 Peptidyl-tRNA hydrolase JYK05_RS01115 PF01386 Ribosomal L25p family JYK05_RS01115 PF14693 Ribosomal protein TL5, C-terminal domain JYK05_RS01120 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JYK05_RS01120 PF14572 Phosphoribosyl synthetase-associated domain JYK05_RS01130 PF00288 GHMP kinases N terminal domain JYK05_RS01130 PF08544 GHMP kinases C terminal JYK05_RS01135 PF03550 Outer membrane lipoprotein LolB JYK05_RS01145 PF06827 Zinc finger found in FPG and IleRS JYK05_RS01145 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JYK05_RS01145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JYK05_RS01150 PF10576 Iron-sulfur binding domain of endonuclease III JYK05_RS01150 PF00730 HhH-GPD superfamily base excision DNA repair protein JYK05_RS01150 PF00633 Helix-hairpin-helix motif JYK05_RS01150 PF14815 NUDIX domain JYK05_RS01160 PF03668 P-loop ATPase protein family JYK05_RS01165 PF02603 HPr Serine kinase N terminus JYK05_RS01165 PF07475 HPr Serine kinase C-terminal domain JYK05_RS01170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JYK05_RS01175 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JYK05_RS01180 PF04963 Sigma-54 factor, core binding domain JYK05_RS01180 PF00309 Sigma-54 factor, Activator interacting domain (AID) JYK05_RS01180 PF04552 Sigma-54, DNA binding domain JYK05_RS01185 PF00005 ABC transporter JYK05_RS01185 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYK05_RS01205 PF00571 CBS domain JYK05_RS01205 PF01380 SIS domain JYK05_RS01210 PF02080 TrkA-C domain JYK05_RS01210 PF00999 Sodium/hydrogen exchanger family JYK05_RS01210 PF02254 TrkA-N domain JYK05_RS01215 PF00156 Phosphoribosyl transferase domain JYK05_RS01220 PF01810 LysE type translocator JYK05_RS01230 PF00551 Formyl transferase JYK05_RS01240 PF17755 UvrA DNA-binding domain JYK05_RS01240 PF17760 UvrA interaction domain JYK05_RS01245 PF07690 Major Facilitator Superfamily JYK05_RS01250 PF00436 Single-strand binding protein family JYK05_RS01255 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS01255 PF00072 Response regulator receiver domain JYK05_RS01260 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS01260 PF00072 Response regulator receiver domain JYK05_RS01265 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS01265 PF00072 Response regulator receiver domain JYK05_RS01270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS01270 PF00072 Response regulator receiver domain JYK05_RS01270 PF09456 RcsC Alpha-Beta-Loop (ABL) JYK05_RS01270 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS01275 PF03466 LysR substrate binding domain JYK05_RS01275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS01280 PF13609 Gram-negative porin JYK05_RS01290 PF07859 alpha/beta hydrolase fold JYK05_RS01300 PF07690 Major Facilitator Superfamily JYK05_RS01315 PF01380 SIS domain JYK05_RS01315 PF01418 Helix-turn-helix domain, rpiR family JYK05_RS01320 PF07969 Amidohydrolase family JYK05_RS01325 PF01042 Endoribonuclease L-PSP JYK05_RS01335 PF14489 QueF-like protein JYK05_RS01335 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JYK05_RS01345 PF00585 C-terminal regulatory domain of Threonine dehydratase JYK05_RS01345 PF00291 Pyridoxal-phosphate dependent enzyme JYK05_RS01355 PF13183 4Fe-4S dicluster domain JYK05_RS01355 PF02754 Cysteine-rich domain JYK05_RS01370 PF01209 ubiE/COQ5 methyltransferase family JYK05_RS01385 PF03109 ABC1 family JYK05_RS01405 PF02938 GAD domain JYK05_RS01405 PF01336 OB-fold nucleic acid binding domain JYK05_RS01405 PF00152 tRNA synthetases class II (D, K and N) JYK05_RS01410 PF00293 NUDIX domain JYK05_RS01415 PF13091 PLD-like domain JYK05_RS01425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS01425 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS01425 PF12806 Acetyl-CoA dehydrogenase C-terminal like JYK05_RS01425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS01430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK05_RS01430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK05_RS01430 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS01435 PF02803 Thiolase, C-terminal domain JYK05_RS01435 PF00108 Thiolase, N-terminal domain JYK05_RS01440 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS01445 PF07007 Lysozyme inhibitor LprI JYK05_RS01450 PF02634 FdhD/NarQ family JYK05_RS01460 PF00563 EAL domain JYK05_RS01460 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS01460 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS01465 PF03061 Thioesterase superfamily JYK05_RS01470 PF00664 ABC transporter transmembrane region JYK05_RS01470 PF00005 ABC transporter JYK05_RS01480 PF07690 Major Facilitator Superfamily JYK05_RS01485 PF03466 LysR substrate binding domain JYK05_RS01485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS01490 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JYK05_RS01490 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JYK05_RS01495 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS01500 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS01505 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS01510 PF00005 ABC transporter JYK05_RS01515 PF13230 Glutamine amidotransferases class-II JYK05_RS01520 PF01979 Amidohydrolase family JYK05_RS01540 PF00572 Ribosomal protein L13 JYK05_RS01545 PF00380 Ribosomal protein S9/S16 JYK05_RS01550 PF01521 Iron-sulphur cluster biosynthesis JYK05_RS01555 PF03702 Anhydro-N-acetylmuramic acid kinase JYK05_RS01560 PF01479 S4 domain JYK05_RS01560 PF00579 tRNA synthetases class I (W and Y) JYK05_RS01565 PF02580 D-Tyr-tRNA(Tyr) deacylase JYK05_RS01570 PF00300 Histidine phosphatase superfamily (branch 1) JYK05_RS01580 PF05491 RuvB C-terminal winged helix domain JYK05_RS01580 PF05496 Holliday junction DNA helicase RuvB P-loop domain JYK05_RS01580 PF17864 RuvB AAA lid domain JYK05_RS01585 PF01330 RuvA N terminal domain JYK05_RS01585 PF07499 RuvA, C-terminal domain JYK05_RS01590 PF02075 Crossover junction endodeoxyribonuclease RuvC JYK05_RS01595 PF02142 MGS-like domain JYK05_RS01595 PF01808 AICARFT/IMPCHase bienzyme JYK05_RS01600 PF02954 Bacterial regulatory protein, Fis family JYK05_RS01605 PF01207 Dihydrouridine synthase (Dus) JYK05_RS01610 PF01494 FAD binding domain JYK05_RS01615 PF00557 Metallopeptidase family M24 JYK05_RS01615 PF05195 Aminopeptidase P, N-terminal domain JYK05_RS01620 PF02926 THUMP domain JYK05_RS01620 PF01170 Putative RNA methylase family UPF0020 JYK05_RS01630 PF02233 NAD(P) transhydrogenase beta subunit JYK05_RS01635 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JYK05_RS01640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JYK05_RS01640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JYK05_RS01645 PF00293 NUDIX domain JYK05_RS01660 PF07859 alpha/beta hydrolase fold JYK05_RS01665 PF13417 Glutathione S-transferase, N-terminal domain JYK05_RS01665 PF00043 Glutathione S-transferase, C-terminal domain JYK05_RS01675 PF02470 MlaD protein JYK05_RS01680 PF04403 Paraquat-inducible protein A JYK05_RS01690 PF01292 Prokaryotic cytochrome b561 JYK05_RS01695 PF04264 YceI-like domain JYK05_RS01700 PF04264 YceI-like domain JYK05_RS01705 PF02355 Protein export membrane protein JYK05_RS01705 PF07549 SecD/SecF GG Motif JYK05_RS01710 PF07549 SecD/SecF GG Motif JYK05_RS01710 PF13721 SecD export protein N-terminal TM region JYK05_RS01710 PF02355 Protein export membrane protein JYK05_RS01715 PF02699 Preprotein translocase subunit JYK05_RS01720 PF01702 Queuine tRNA-ribosyltransferase JYK05_RS01725 PF02547 Queuosine biosynthesis protein JYK05_RS01730 PF00270 DEAD/DEAH box helicase JYK05_RS01730 PF00271 Helicase conserved C-terminal domain JYK05_RS01730 PF17191 RecG wedge domain JYK05_RS01735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS01735 PF03466 LysR substrate binding domain JYK05_RS01740 PF05656 Protein of unknown function (DUF805) JYK05_RS01745 PF00199 Catalase JYK05_RS01745 PF06628 Catalase-related immune-responsive JYK05_RS01755 PF00210 Ferritin-like domain JYK05_RS01760 PF01040 UbiA prenyltransferase family JYK05_RS01770 PF03807 NADP oxidoreductase coenzyme F420-dependent JYK05_RS01770 PF14748 Pyrroline-5-carboxylate reductase dimerisation JYK05_RS01775 PF01168 Alanine racemase, N-terminal domain JYK05_RS01780 PF13183 4Fe-4S dicluster domain JYK05_RS01780 PF02754 Cysteine-rich domain JYK05_RS01785 PF01565 FAD binding domain JYK05_RS01790 PF01565 FAD binding domain JYK05_RS01790 PF02913 FAD linked oxidases, C-terminal domain JYK05_RS01795 PF01565 FAD binding domain JYK05_RS01795 PF02913 FAD linked oxidases, C-terminal domain JYK05_RS01800 PF01923 Cobalamin adenosyltransferase JYK05_RS01805 PF00793 DAHP synthetase I family JYK05_RS01810 PF01523 Putative modulator of DNA gyrase JYK05_RS01815 PF00795 Carbon-nitrogen hydrolase JYK05_RS01825 PF03710 Glutamate-ammonia ligase adenylyltransferase JYK05_RS01825 PF08335 GlnD PII-uridylyltransferase JYK05_RS01830 PF02463 RecF/RecN/SMC N terminal domain JYK05_RS01835 PF01513 ATP-NAD kinase JYK05_RS01840 PF01628 HrcA protein C terminal domain JYK05_RS01840 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding JYK05_RS01845 PF00762 Ferrochelatase JYK05_RS01850 PF01479 S4 domain JYK05_RS01860 PF01025 GrpE JYK05_RS01870 PF00012 Hsp70 protein JYK05_RS01875 PF00226 DnaJ domain JYK05_RS01875 PF01556 DnaJ C terminal domain JYK05_RS01875 PF00684 DnaJ central domain JYK05_RS01880 PF04715 Anthranilate synthase component I, N terminal region JYK05_RS01880 PF00425 chorismate binding enzyme JYK05_RS01880 PF00117 Glutamine amidotransferase class-I JYK05_RS01885 PF13378 Enolase C-terminal domain-like JYK05_RS01885 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYK05_RS01890 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS01890 PF07729 FCD domain JYK05_RS01895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK05_RS01905 PF01553 Acyltransferase JYK05_RS01915 PF05746 DALR anticodon binding domain JYK05_RS01915 PF02092 Glycyl-tRNA synthetase beta subunit JYK05_RS01920 PF02091 Glycyl-tRNA synthetase alpha subunit JYK05_RS01935 PF00795 Carbon-nitrogen hydrolase JYK05_RS01940 PF00571 CBS domain JYK05_RS01940 PF03471 Transporter associated domain JYK05_RS01945 PF04752 ChaC-like protein JYK05_RS01950 PF02130 Uncharacterized protein family UPF0054 JYK05_RS01955 PF02562 PhoH-like protein JYK05_RS01960 PF00919 Uncharacterized protein family UPF0004 JYK05_RS01960 PF01938 TRAM domain JYK05_RS01960 PF04055 Radical SAM superfamily JYK05_RS01965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYK05_RS01965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYK05_RS01985 PF07690 Major Facilitator Superfamily JYK05_RS02000 PF00270 DEAD/DEAH box helicase JYK05_RS02000 PF00271 Helicase conserved C-terminal domain JYK05_RS02005 PF03006 Haemolysin-III related JYK05_RS02010 PF00034 Cytochrome c JYK05_RS02010 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS02030 PF02548 Ketopantoate hydroxymethyltransferase JYK05_RS02035 PF01712 Deoxynucleoside kinase JYK05_RS02040 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JYK05_RS02045 PF01743 Poly A polymerase head domain JYK05_RS02045 PF12626 Polymerase A arginine-rich C-terminus JYK05_RS02045 PF12627 Probable RNA and SrmB- binding site of polymerase A JYK05_RS02055 PF00308 Bacterial dnaA protein JYK05_RS02060 PF00586 AIR synthase related protein, N-terminal domain JYK05_RS02060 PF02769 AIR synthase related protein, C-terminal domain JYK05_RS02070 PF08676 MutL C terminal dimerisation domain JYK05_RS02070 PF01119 DNA mismatch repair protein, C-terminal domain JYK05_RS02075 PF09335 SNARE associated Golgi protein JYK05_RS02085 PF01476 LysM domain JYK05_RS02085 PF01551 Peptidase family M23 JYK05_RS02110 PF08946 Osmosensory transporter coiled coil JYK05_RS02110 PF00083 Sugar (and other) transporter JYK05_RS02115 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS02115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS02115 PF08521 Two-component sensor kinase N-terminal JYK05_RS02120 PF00072 Response regulator receiver domain JYK05_RS02120 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS02125 PF00154 recA bacterial DNA recombination protein JYK05_RS02130 PF02631 RecX family JYK05_RS02140 PF00549 CoA-ligase JYK05_RS02140 PF08442 ATP-grasp domain JYK05_RS02145 PF02629 CoA binding domain JYK05_RS02145 PF00549 CoA-ligase JYK05_RS02150 PF03741 Integral membrane protein TerC family JYK05_RS02155 PF07963 Prokaryotic N-terminal methylation motif JYK05_RS02155 PF00114 Pilin (bacterial filament) JYK05_RS02165 PF01967 MoaC family JYK05_RS02170 PF01435 Peptidase family M48 JYK05_RS02170 PF07720 Tetratricopeptide repeat JYK05_RS02180 PF00561 alpha/beta hydrolase fold JYK05_RS02190 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JYK05_RS02200 PF01063 Amino-transferase class IV JYK05_RS02215 PF00162 Phosphoglycerate kinase JYK05_RS02220 PF00224 Pyruvate kinase, barrel domain JYK05_RS02220 PF02887 Pyruvate kinase, alpha/beta domain JYK05_RS02225 PF01116 Fructose-bisphosphate aldolase class-II JYK05_RS02230 PF01259 SAICAR synthetase JYK05_RS02235 PF00731 AIR carboxylase JYK05_RS02240 PF02222 ATP-grasp domain JYK05_RS02240 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JYK05_RS02245 PF01300 Telomere recombination JYK05_RS02245 PF03481 Putative GTP-binding controlling metal-binding JYK05_RS02255 PF05658 Head domain of trimeric autotransporter adhesin JYK05_RS02255 PF05662 Coiled stalk of trimeric autotransporter adhesin JYK05_RS02255 PF13018 Extended Signal Peptide of Type V secretion system JYK05_RS02255 PF03895 YadA-like membrane anchor domain JYK05_RS02265 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JYK05_RS02270 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS02270 PF00072 Response regulator receiver domain JYK05_RS02275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS02275 PF08521 Two-component sensor kinase N-terminal JYK05_RS02275 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS02285 PF03895 YadA-like membrane anchor domain JYK05_RS02285 PF13018 Extended Signal Peptide of Type V secretion system JYK05_RS02285 PF05662 Coiled stalk of trimeric autotransporter adhesin JYK05_RS02285 PF05658 Head domain of trimeric autotransporter adhesin JYK05_RS02290 PF13180 PDZ domain JYK05_RS02315 PF08361 MAATS-type transcriptional repressor, C-terminal region JYK05_RS02315 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS02320 PF00529 HlyD membrane-fusion protein of T1SS JYK05_RS02320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYK05_RS02325 PF00873 AcrB/AcrD/AcrF family JYK05_RS02330 PF02321 Outer membrane efflux protein JYK05_RS02335 PF02384 N-6 DNA Methylase JYK05_RS02335 PF12161 HsdM N-terminal domain JYK05_RS02340 PF01420 Type I restriction modification DNA specificity domain JYK05_RS02345 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JYK05_RS02345 PF12008 Type I restriction and modification enzyme - subunit R C terminal JYK05_RS02345 PF18766 SWI2/SNF2 ATPase JYK05_RS02350 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS02350 PF13823 Alcohol dehydrogenase GroES-associated JYK05_RS02350 PF00107 Zinc-binding dehydrogenase JYK05_RS02355 PF17755 UvrA DNA-binding domain JYK05_RS02365 PF00860 Permease family JYK05_RS02370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYK05_RS02370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYK05_RS02380 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS02380 PF00107 Zinc-binding dehydrogenase JYK05_RS02385 PF00756 Putative esterase JYK05_RS02390 PF00950 ABC 3 transport family JYK05_RS02395 PF00005 ABC transporter JYK05_RS02400 PF01297 Zinc-uptake complex component A periplasmic JYK05_RS02405 PF01475 Ferric uptake regulator family JYK05_RS02420 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS02425 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS02435 PF00005 ABC transporter JYK05_RS02435 PF17912 MalK OB fold domain JYK05_RS02440 PF03476 MOSC N-terminal beta barrel domain JYK05_RS02440 PF03473 MOSC domain JYK05_RS02440 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS02445 PF04198 Putative sugar-binding domain JYK05_RS02450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYK05_RS02450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYK05_RS02455 PF01232 Mannitol dehydrogenase Rossmann domain JYK05_RS02455 PF08125 Mannitol dehydrogenase C-terminal domain JYK05_RS02460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYK05_RS02460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYK05_RS02470 PF04209 homogentisate 1,2-dioxygenase JYK05_RS02480 PF07690 Major Facilitator Superfamily JYK05_RS02495 PF07690 Major Facilitator Superfamily JYK05_RS02520 PF08494 DEAD/H associated JYK05_RS02520 PF00270 DEAD/DEAH box helicase JYK05_RS02520 PF00271 Helicase conserved C-terminal domain JYK05_RS02525 PF04675 DNA ligase N terminus JYK05_RS02525 PF01068 ATP dependent DNA ligase domain JYK05_RS02525 PF04679 ATP dependent DNA ligase C terminal region JYK05_RS02530 PF04675 DNA ligase N terminus JYK05_RS02530 PF01068 ATP dependent DNA ligase domain JYK05_RS02530 PF04679 ATP dependent DNA ligase C terminal region JYK05_RS02540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYK05_RS02540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK05_RS02545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS02545 PF03466 LysR substrate binding domain JYK05_RS02550 PF02080 TrkA-C domain JYK05_RS02550 PF06826 Predicted Permease Membrane Region JYK05_RS02555 PF06826 Predicted Permease Membrane Region JYK05_RS02555 PF02080 TrkA-C domain JYK05_RS02570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK05_RS02570 PF00005 ABC transporter JYK05_RS02575 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK05_RS02575 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS02580 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS02585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK05_RS02595 PF00009 Elongation factor Tu GTP binding domain JYK05_RS02595 PF03144 Elongation factor Tu domain 2 JYK05_RS02595 PF00679 Elongation factor G C-terminus JYK05_RS02595 PF14492 Elongation Factor G, domain II JYK05_RS02595 PF03764 Elongation factor G, domain IV JYK05_RS02610 PF00849 RNA pseudouridylate synthase JYK05_RS02615 PF00180 Isocitrate/isopropylmalate dehydrogenase JYK05_RS02620 PF00313 'Cold-shock' DNA-binding domain JYK05_RS02625 PF02617 ATP-dependent Clp protease adaptor protein ClpS JYK05_RS02630 PF02861 Clp amino terminal domain, pathogenicity island component JYK05_RS02630 PF10431 C-terminal, D2-small domain, of ClpB protein JYK05_RS02630 PF07724 AAA domain (Cdc48 subfamily) JYK05_RS02630 PF17871 AAA lid domain JYK05_RS02630 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS02635 PF00692 dUTPase JYK05_RS02640 PF00296 Luciferase-like monooxygenase JYK05_RS02645 PF04127 DNA / pantothenate metabolism flavoprotein JYK05_RS02645 PF02441 Flavoprotein JYK05_RS02650 PF01252 Signal peptidase (SPase) II JYK05_RS02655 PF00133 tRNA synthetases class I (I, L, M and V) JYK05_RS02655 PF06827 Zinc finger found in FPG and IleRS JYK05_RS02655 PF08264 Anticodon-binding domain of tRNA JYK05_RS02660 PF01687 Riboflavin kinase JYK05_RS02660 PF06574 FAD synthetase JYK05_RS02665 PF00551 Formyl transferase JYK05_RS02670 PF01029 NusB family JYK05_RS02670 PF01189 16S rRNA methyltransferase RsmB/F JYK05_RS02675 PF00924 Mechanosensitive ion channel JYK05_RS02675 PF12795 Mechanosensitive ion channel porin domain JYK05_RS02675 PF12794 Mechanosensitive ion channel inner membrane domain 1 JYK05_RS02685 PF02445 Quinolinate synthetase A protein JYK05_RS02690 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JYK05_RS02690 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JYK05_RS02695 PF02910 Fumarate reductase flavoprotein C-term JYK05_RS02695 PF00890 FAD binding domain JYK05_RS02700 PF00471 Ribosomal protein L33 JYK05_RS02705 PF00830 Ribosomal L28 family JYK05_RS02710 PF04002 RadC-like JAB domain JYK05_RS02715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYK05_RS02720 PF02401 LytB protein JYK05_RS02725 PF13458 Periplasmic binding protein JYK05_RS02730 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS02735 PF11862 Domain of unknown function (DUF3382) JYK05_RS02735 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS02740 PF00005 ABC transporter JYK05_RS02740 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYK05_RS02745 PF00005 ABC transporter JYK05_RS02750 PF00583 Acetyltransferase (GNAT) family JYK05_RS02755 PF00202 Aminotransferase class-III JYK05_RS02760 PF00970 Oxidoreductase FAD-binding domain JYK05_RS02760 PF00175 Oxidoreductase NAD-binding domain JYK05_RS02760 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS02775 PF00849 RNA pseudouridylate synthase JYK05_RS02775 PF01479 S4 domain JYK05_RS02805 PF03466 LysR substrate binding domain JYK05_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS02810 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYK05_RS02810 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYK05_RS02820 PF01507 Phosphoadenosine phosphosulfate reductase family JYK05_RS02825 PF01507 Phosphoadenosine phosphosulfate reductase family JYK05_RS02830 PF00009 Elongation factor Tu GTP binding domain JYK05_RS02835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK05_RS02835 PF14824 Sirohaem biosynthesis protein central JYK05_RS02835 PF10414 Sirohaem synthase dimerisation region JYK05_RS02865 PF00883 Cytosol aminopeptidase family, catalytic domain JYK05_RS02865 PF02789 Cytosol aminopeptidase family, N-terminal domain JYK05_RS02880 PF00920 Dehydratase family JYK05_RS02885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS02885 PF03466 LysR substrate binding domain JYK05_RS02890 PF01790 Prolipoprotein diacylglyceryl transferase JYK05_RS02910 PF05164 Cell division protein ZapA JYK05_RS02920 PF00593 TonB dependent receptor JYK05_RS02920 PF07715 TonB-dependent Receptor Plug Domain JYK05_RS02925 PF01032 FecCD transport family JYK05_RS02930 PF00005 ABC transporter JYK05_RS02935 PF02277 Phosphoribosyltransferase JYK05_RS02940 PF02654 Cobalamin-5-phosphate synthase JYK05_RS02950 PF01497 Periplasmic binding protein JYK05_RS02955 PF00155 Aminotransferase class I and II JYK05_RS02960 PF03186 CobD/Cbib protein JYK05_RS02960 PF17113 Regulatory signalling modulator protein AmpE JYK05_RS02965 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JYK05_RS02970 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JYK05_RS02970 PF07685 CobB/CobQ-like glutamine amidotransferase domain JYK05_RS02975 PF03061 Thioesterase superfamily JYK05_RS02980 PF10609 NUBPL iron-transfer P-loop NTPase JYK05_RS02980 PF01883 Iron-sulfur cluster assembly protein JYK05_RS02985 PF02261 Aspartate decarboxylase JYK05_RS02990 PF02569 Pantoate-beta-alanine ligase JYK05_RS02995 PF02616 Segregation and condensation protein ScpA JYK05_RS03010 PF04357 TamB, inner membrane protein subunit of TAM complex JYK05_RS03025 PF09334 tRNA synthetases class I (M) JYK05_RS03025 PF01588 Putative tRNA binding domain JYK05_RS03025 PF08264 Anticodon-binding domain of tRNA JYK05_RS03030 PF00691 OmpA family JYK05_RS03030 PF05736 OprF membrane domain JYK05_RS03035 PF10609 NUBPL iron-transfer P-loop NTPase JYK05_RS03045 PF00692 dUTPase JYK05_RS03050 PF01276 Orn/Lys/Arg decarboxylase, major domain JYK05_RS03050 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JYK05_RS03050 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JYK05_RS03055 PF02798 Glutathione S-transferase, N-terminal domain JYK05_RS03055 PF00043 Glutathione S-transferase, C-terminal domain JYK05_RS03060 PF01062 Bestrophin, RFP-TM, chloride channel JYK05_RS03065 PF18416 N-acetylglucosamine binding protein domain 2 JYK05_RS03065 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JYK05_RS03090 PF07963 Prokaryotic N-terminal methylation motif JYK05_RS03100 PF00263 Bacterial type II and III secretion system protein JYK05_RS03100 PF03958 Bacterial type II/III secretion system short domain JYK05_RS03125 PF00437 Type II/IV secretion system protein JYK05_RS03130 PF00482 Type II secretion system (T2SS), protein F JYK05_RS03135 PF07963 Prokaryotic N-terminal methylation motif JYK05_RS03135 PF08334 Type II secretion system (T2SS), protein G JYK05_RS03145 PF14698 Argininosuccinate lyase C-terminal JYK05_RS03145 PF00206 Lyase JYK05_RS03155 PF08241 Methyltransferase domain JYK05_RS03160 PF00311 Phosphoenolpyruvate carboxylase JYK05_RS03165 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JYK05_RS03165 PF03900 Porphobilinogen deaminase, C-terminal domain JYK05_RS03170 PF02602 Uroporphyrinogen-III synthase HemD JYK05_RS03180 PF00581 Rhodanese-like domain JYK05_RS03190 PF03458 UPF0126 domain JYK05_RS03195 PF01713 Smr domain JYK05_RS03200 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS03205 PF17854 FtsK alpha domain JYK05_RS03205 PF01580 FtsK/SpoIIIE family JYK05_RS03205 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JYK05_RS03205 PF09397 Ftsk gamma domain JYK05_RS03210 PF03548 Outer membrane lipoprotein carrier protein LolA JYK05_RS03230 PF16193 AAA C-terminal domain JYK05_RS03230 PF12002 MgsA AAA+ ATPase C terminal JYK05_RS03230 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS03235 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYK05_RS03235 PF02403 Seryl-tRNA synthetase N-terminal domain JYK05_RS03250 PF00557 Metallopeptidase family M24 JYK05_RS03260 PF03775 Septum formation inhibitor MinC, C-terminal domain JYK05_RS03260 PF05209 Septum formation inhibitor MinC, N-terminal domain JYK05_RS03265 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JYK05_RS03270 PF03776 Septum formation topological specificity factor MinE JYK05_RS03275 PF00654 Voltage gated chloride channel JYK05_RS03290 PF07690 Major Facilitator Superfamily JYK05_RS03290 PF00083 Sugar (and other) transporter JYK05_RS03320 PF05977 Transmembrane secretion effector JYK05_RS03325 PF04055 Radical SAM superfamily JYK05_RS03325 PF06969 HemN C-terminal domain JYK05_RS03330 PF01725 Ham1 family JYK05_RS03335 PF01138 3' exoribonuclease family, domain 1 JYK05_RS03335 PF03725 3' exoribonuclease family, domain 2 JYK05_RS03340 PF03755 YicC-like family, N-terminal region JYK05_RS03340 PF08340 Domain of unknown function (DUF1732) JYK05_RS03345 PF00625 Guanylate kinase JYK05_RS03350 PF01192 RNA polymerase Rpb6 JYK05_RS03355 PF02824 TGS domain JYK05_RS03355 PF04607 Region found in RelA / SpoT proteins JYK05_RS03355 PF13291 ACT domain JYK05_RS03375 PF03449 Transcription elongation factor, N-terminal JYK05_RS03375 PF01272 Transcription elongation factor, GreA/GreB, C-term JYK05_RS03380 PF13609 Gram-negative porin JYK05_RS03390 PF13307 Helicase C-terminal domain JYK05_RS03390 PF00929 Exonuclease JYK05_RS03390 PF04851 Type III restriction enzyme, res subunit JYK05_RS03410 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JYK05_RS03450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK05_RS03450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK05_RS03455 PF00266 Aminotransferase class-V JYK05_RS03465 PF01979 Amidohydrolase family JYK05_RS03470 PF00860 Permease family JYK05_RS03475 PF00962 Adenosine/AMP deaminase JYK05_RS03485 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK05_RS03485 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK05_RS03490 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS03490 PF01799 [2Fe-2S] binding domain JYK05_RS03495 PF02600 Disulfide bond formation protein DsbB JYK05_RS03500 PF01425 Amidase JYK05_RS03505 PF06969 HemN C-terminal domain JYK05_RS03505 PF04055 Radical SAM superfamily JYK05_RS03510 PF03692 Putative zinc- or iron-chelating domain JYK05_RS03520 PF02673 Bacitracin resistance protein BacA JYK05_RS03525 PF02390 Putative methyltransferase JYK05_RS03535 PF02325 YGGT family JYK05_RS03550 PF00291 Pyridoxal-phosphate dependent enzyme JYK05_RS03555 PF01810 LysE type translocator JYK05_RS03565 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JYK05_RS03575 PF00155 Aminotransferase class I and II JYK05_RS03580 PF01029 NusB family JYK05_RS03585 PF00885 6,7-dimethyl-8-ribityllumazine synthase JYK05_RS03590 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JYK05_RS03590 PF00925 GTP cyclohydrolase II JYK05_RS03605 PF00677 Lumazine binding domain JYK05_RS03610 PF01872 RibD C-terminal domain JYK05_RS03610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JYK05_RS03615 PF00202 Aminotransferase class-III JYK05_RS03625 PF07690 Major Facilitator Superfamily JYK05_RS03630 PF00326 Prolyl oligopeptidase family JYK05_RS03630 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JYK05_RS03635 PF00005 ABC transporter JYK05_RS03635 PF03459 TOBE domain JYK05_RS03635 PF17912 MalK OB fold domain JYK05_RS03640 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS03645 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS03650 PF01547 Bacterial extracellular solute-binding protein JYK05_RS03655 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JYK05_RS03655 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JYK05_RS03660 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JYK05_RS03665 PF02685 Glucokinase JYK05_RS03665 PF01418 Helix-turn-helix domain, rpiR family JYK05_RS03665 PF01380 SIS domain JYK05_RS03670 PF13609 Gram-negative porin JYK05_RS03675 PF13609 Gram-negative porin JYK05_RS03680 PF00005 ABC transporter JYK05_RS03685 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS03690 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS03695 PF17954 Quercetinase C-terminal cupin domain JYK05_RS03695 PF02678 Pirin JYK05_RS03705 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS03705 PF00072 Response regulator receiver domain JYK05_RS03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS03710 PF00672 HAMP domain JYK05_RS03710 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS03720 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS03735 PF00005 ABC transporter JYK05_RS03750 PF00158 Sigma-54 interaction domain JYK05_RS03750 PF01590 GAF domain JYK05_RS03750 PF02954 Bacterial regulatory protein, Fis family JYK05_RS03765 PF02954 Bacterial regulatory protein, Fis family JYK05_RS03765 PF00072 Response regulator receiver domain JYK05_RS03765 PF00158 Sigma-54 interaction domain JYK05_RS03780 PF00982 Glycosyltransferase family 20 JYK05_RS03790 PF03631 Virulence factor BrkB JYK05_RS03795 PF00309 Sigma-54 factor, Activator interacting domain (AID) JYK05_RS03795 PF04963 Sigma-54 factor, core binding domain JYK05_RS03795 PF04552 Sigma-54, DNA binding domain JYK05_RS03835 PF01965 DJ-1/PfpI family JYK05_RS03840 PF07690 Major Facilitator Superfamily JYK05_RS03845 PF01161 Phosphatidylethanolamine-binding protein JYK05_RS03855 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS03855 PF17938 Tetracyclin repressor-like, C-terminal domain JYK05_RS03860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYK05_RS03860 PF08501 Shikimate dehydrogenase substrate binding domain JYK05_RS03865 PF01261 Xylose isomerase-like TIM barrel JYK05_RS03865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK05_RS03885 PF13460 NAD(P)H-binding JYK05_RS03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS03890 PF03466 LysR substrate binding domain JYK05_RS03900 PF00072 Response regulator receiver domain JYK05_RS03900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS03900 PF13426 PAS domain JYK05_RS03915 PF00561 alpha/beta hydrolase fold JYK05_RS03920 PF03466 LysR substrate binding domain JYK05_RS03920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS03930 PF08241 Methyltransferase domain JYK05_RS03935 PF00301 Rubredoxin JYK05_RS03945 PF00005 ABC transporter JYK05_RS03945 PF16326 ABC transporter C-terminal domain JYK05_RS03945 PF12848 ABC transporter JYK05_RS03950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS03950 PF01751 Toprim domain JYK05_RS03950 PF00986 DNA gyrase B subunit, carboxyl terminus JYK05_RS03950 PF00204 DNA gyrase B JYK05_RS03955 PF00521 DNA gyrase/topoisomerase IV, subunit A JYK05_RS03965 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS03965 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS03965 PF00563 EAL domain JYK05_RS03970 PF02567 Phenazine biosynthesis-like protein JYK05_RS03980 PF00155 Aminotransferase class I and II JYK05_RS03985 PF00892 EamA-like transporter family JYK05_RS03995 PF00155 Aminotransferase class I and II JYK05_RS03995 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS04005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS04005 PF00183 Hsp90 protein JYK05_RS04015 PF04345 Chorismate lyase JYK05_RS04030 PF11755 Protein of unknown function (DUF3311) JYK05_RS04035 PF00474 Sodium:solute symporter family JYK05_RS04045 PF06983 3-demethylubiquinone-9 3-methyltransferase JYK05_RS04050 PF00923 Transaldolase/Fructose-6-phosphate aldolase JYK05_RS04060 PF03594 Benzoate membrane transport protein JYK05_RS04075 PF17862 AAA+ lid domain JYK05_RS04075 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS04075 PF01434 Peptidase family M41 JYK05_RS04080 PF00034 Cytochrome c JYK05_RS04095 PF00633 Helix-hairpin-helix motif JYK05_RS04095 PF10576 Iron-sulfur binding domain of endonuclease III JYK05_RS04095 PF00730 HhH-GPD superfamily base excision DNA repair protein JYK05_RS04100 PF04060 Putative Fe-S cluster JYK05_RS04105 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS04105 PF17938 Tetracyclin repressor-like, C-terminal domain JYK05_RS04120 PF00723 Glycosyl hydrolases family 15 JYK05_RS04135 PF10282 Lactonase, 7-bladed beta-propeller JYK05_RS04145 PF01544 CorA-like Mg2+ transporter protein JYK05_RS04150 PF17854 FtsK alpha domain JYK05_RS04150 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JYK05_RS04150 PF01580 FtsK/SpoIIIE family JYK05_RS04150 PF09397 Ftsk gamma domain JYK05_RS04150 PF09397 Ftsk gamma domain JYK05_RS04150 PF17854 FtsK alpha domain JYK05_RS04150 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JYK05_RS04150 PF01580 FtsK/SpoIIIE family JYK05_RS04160 PF02222 ATP-grasp domain JYK05_RS04160 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS04170 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme JYK05_RS04175 PF00271 Helicase conserved C-terminal domain JYK05_RS04175 PF00270 DEAD/DEAH box helicase JYK05_RS04180 PF00749 tRNA synthetases class I (E and Q), catalytic domain JYK05_RS04185 PF17773 UPF0176 acylphosphatase like domain JYK05_RS04190 PF01336 OB-fold nucleic acid binding domain JYK05_RS04190 PF14579 Helix-hairpin-helix motif JYK05_RS04190 PF02811 PHP domain JYK05_RS04190 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYK05_RS04190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYK05_RS04195 PF00535 Glycosyl transferase family 2 JYK05_RS04200 PF00005 ABC transporter JYK05_RS04200 PF00664 ABC transporter transmembrane region JYK05_RS04205 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JYK05_RS04215 PF00534 Glycosyl transferases group 1 JYK05_RS04215 PF13439 Glycosyltransferase Family 4 JYK05_RS04225 PF00575 S1 RNA binding domain JYK05_RS04225 PF10150 Ribonuclease E/G family JYK05_RS04230 PF02545 Maf-like protein JYK05_RS04235 PF02590 Predicted SPOUT methyltransferase JYK05_RS04245 PF01467 Cytidylyltransferase-like JYK05_RS04250 PF01218 Coproporphyrinogen III oxidase JYK05_RS04255 PF02844 Phosphoribosylglycinamide synthetase, N domain JYK05_RS04255 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JYK05_RS04255 PF02843 Phosphoribosylglycinamide synthetase, C domain JYK05_RS04260 PF01709 Transcriptional regulator JYK05_RS04270 PF00106 short chain dehydrogenase JYK05_RS04275 PF02142 MGS-like domain JYK05_RS04280 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS04280 PF00107 Zinc-binding dehydrogenase JYK05_RS04285 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS04285 PF00072 Response regulator receiver domain JYK05_RS04295 PF00873 AcrB/AcrD/AcrF family JYK05_RS04300 PF00873 AcrB/AcrD/AcrF family JYK05_RS04305 PF13533 Biotin-lipoyl like JYK05_RS04325 PF00924 Mechanosensitive ion channel JYK05_RS04335 PF13404 AsnC-type helix-turn-helix domain JYK05_RS04335 PF01037 Lrp/AsnC ligand binding domain JYK05_RS04345 PF12805 FUSC-like inner membrane protein yccS JYK05_RS04350 PF17946 RecC C-terminal domain JYK05_RS04355 PF12705 PD-(D/E)XK nuclease superfamily JYK05_RS04355 PF13361 UvrD-like helicase C-terminal domain JYK05_RS04355 PF00580 UvrD/REP helicase N-terminal domain JYK05_RS04365 PF13538 UvrD-like helicase C-terminal domain JYK05_RS04370 PF00472 RF-1 domain JYK05_RS04380 PF02652 L-lactate permease JYK05_RS04400 PF01964 Radical SAM ThiC family JYK05_RS04400 PF13667 ThiC-associated domain JYK05_RS04420 PF07730 Histidine kinase JYK05_RS04420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS04440 PF00072 Response regulator receiver domain JYK05_RS04440 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS04445 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS04445 PF00072 Response regulator receiver domain JYK05_RS04450 PF07690 Major Facilitator Superfamily JYK05_RS04475 PF06736 Protein of unknown function (DUF1211) JYK05_RS04485 PF08946 Osmosensory transporter coiled coil JYK05_RS04485 PF00083 Sugar (and other) transporter JYK05_RS04490 PF04362 Bacterial Fe(2+) trafficking JYK05_RS04495 PF00583 Acetyltransferase (GNAT) family JYK05_RS04495 PF00696 Amino acid kinase family JYK05_RS04505 PF11898 Domain of unknown function (DUF3418) JYK05_RS04505 PF00270 DEAD/DEAH box helicase JYK05_RS04505 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JYK05_RS04505 PF04408 Helicase associated domain (HA2) JYK05_RS04505 PF00271 Helicase conserved C-terminal domain JYK05_RS04525 PF02464 Competence-damaged protein JYK05_RS04525 PF18146 Damage-inducible protein CinA KH domain JYK05_RS04525 PF00994 Probable molybdopterin binding domain JYK05_RS04530 PF03932 CutC family JYK05_RS04540 PF00120 Glutamine synthetase, catalytic domain JYK05_RS04540 PF03951 Glutamine synthetase, beta-Grasp domain JYK05_RS04545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS04545 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS04545 PF00989 PAS fold JYK05_RS04550 PF02954 Bacterial regulatory protein, Fis family JYK05_RS04550 PF00072 Response regulator receiver domain JYK05_RS04550 PF00158 Sigma-54 interaction domain JYK05_RS04565 PF03814 Potassium-transporting ATPase A subunit JYK05_RS04575 PF02669 K+-transporting ATPase, c chain JYK05_RS04580 PF13493 Domain of unknown function (DUF4118) JYK05_RS04580 PF02702 Osmosensitive K+ channel His kinase sensor domain JYK05_RS04580 PF13492 GAF domain JYK05_RS04580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS04580 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS04600 PF07969 Amidohydrolase family JYK05_RS04605 PF01432 Peptidase family M3 JYK05_RS04610 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JYK05_RS04610 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JYK05_RS04625 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS04625 PF00072 Response regulator receiver domain JYK05_RS04630 PF00989 PAS fold JYK05_RS04630 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS04630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS04635 PF17831 Pyruvate dehydrogenase E1 component middle domain JYK05_RS04635 PF00456 Transketolase, thiamine diphosphate binding domain JYK05_RS04640 PF02817 e3 binding domain JYK05_RS04640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYK05_RS04640 PF00364 Biotin-requiring enzyme JYK05_RS04645 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS04645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYK05_RS04650 PF09361 Phasin protein JYK05_RS04655 PF00768 D-alanyl-D-alanine carboxypeptidase JYK05_RS04660 PF09339 IclR helix-turn-helix domain JYK05_RS04660 PF01614 Bacterial transcriptional regulator JYK05_RS04665 PF02754 Cysteine-rich domain JYK05_RS04670 PF11870 Domain of unknown function (DUF3390) JYK05_RS04670 PF13183 4Fe-4S dicluster domain JYK05_RS04670 PF02589 LUD domain JYK05_RS04685 PF00155 Aminotransferase class I and II JYK05_RS04690 PF02151 UvrB/uvrC motif JYK05_RS04690 PF12344 Ultra-violet resistance protein B JYK05_RS04690 PF00271 Helicase conserved C-terminal domain JYK05_RS04690 PF17757 UvrB interaction domain JYK05_RS04690 PF04851 Type III restriction enzyme, res subunit JYK05_RS04695 PF10634 Fe2+ transport protein JYK05_RS04700 PF13473 Cupredoxin-like domain JYK05_RS04705 PF03239 Iron permease FTR1 family JYK05_RS04710 PF12801 4Fe-4S binding domain JYK05_RS04710 PF04205 FMN-binding domain JYK05_RS04715 PF03928 Haem-degrading JYK05_RS04720 PF10636 Hemin uptake protein hemP JYK05_RS04735 PF05726 Pirin C-terminal cupin domain JYK05_RS04735 PF02678 Pirin JYK05_RS04740 PF03466 LysR substrate binding domain JYK05_RS04740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS04745 PF02472 Biopolymer transport protein ExbD/TolR JYK05_RS04750 PF01618 MotA/TolQ/ExbB proton channel family JYK05_RS04755 PF03544 Gram-negative bacterial TonB protein C-terminal JYK05_RS04765 PF01177 Asp/Glu/Hydantoin racemase JYK05_RS04770 PF00210 Ferritin-like domain JYK05_RS04780 PF03350 Uncharacterized protein family, UPF0114 JYK05_RS04790 PF13193 AMP-binding enzyme C-terminal domain JYK05_RS04790 PF00501 AMP-binding enzyme JYK05_RS04790 PF16177 Acetyl-coenzyme A synthetase N-terminus JYK05_RS04800 PF00474 Sodium:solute symporter family JYK05_RS04855 PF00106 short chain dehydrogenase JYK05_RS04865 PF01810 LysE type translocator JYK05_RS04870 PF00854 POT family JYK05_RS04880 PF01165 Ribosomal protein S21 JYK05_RS04885 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS04885 PF00970 Oxidoreductase FAD-binding domain JYK05_RS04885 PF00175 Oxidoreductase NAD-binding domain JYK05_RS04890 PF09186 Domain of unknown function (DUF1949) JYK05_RS04890 PF01205 Uncharacterized protein family UPF0029 JYK05_RS04900 PF00563 EAL domain JYK05_RS04900 PF12792 CSS motif domain associated with EAL JYK05_RS04910 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS04915 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS04920 PF00005 ABC transporter JYK05_RS04925 PF12833 Helix-turn-helix domain JYK05_RS04930 PF00202 Aminotransferase class-III JYK05_RS04935 PF04958 Arginine N-succinyltransferase beta subunit JYK05_RS04940 PF04958 Arginine N-succinyltransferase beta subunit JYK05_RS04945 PF00171 Aldehyde dehydrogenase family JYK05_RS04950 PF04996 Succinylarginine dihydrolase JYK05_RS04955 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JYK05_RS04960 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS04965 PF13533 Biotin-lipoyl like JYK05_RS04970 PF07869 Protein of unknown function (DUF1656) JYK05_RS04975 PF04632 Fusaric acid resistance protein family JYK05_RS04980 PF02321 Outer membrane efflux protein JYK05_RS04985 PF03466 LysR substrate binding domain JYK05_RS04985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS04995 PF02586 SOS response associated peptidase (SRAP) JYK05_RS05005 PF02913 FAD linked oxidases, C-terminal domain JYK05_RS05005 PF01565 FAD binding domain JYK05_RS05015 PF03358 NADPH-dependent FMN reductase JYK05_RS05020 PF03631 Virulence factor BrkB JYK05_RS05030 PF12146 Serine aminopeptidase, S33 JYK05_RS05035 PF01053 Cys/Met metabolism PLP-dependent enzyme JYK05_RS05040 PF00571 CBS domain JYK05_RS05040 PF00478 IMP dehydrogenase / GMP reductase domain JYK05_RS05045 PF07690 Major Facilitator Superfamily JYK05_RS05050 PF01264 Chorismate synthase JYK05_RS05070 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS05070 PF00072 Response regulator receiver domain JYK05_RS05075 PF01144 Coenzyme A transferase JYK05_RS05080 PF01144 Coenzyme A transferase JYK05_RS05085 PF12697 Alpha/beta hydrolase family JYK05_RS05090 PF01042 Endoribonuclease L-PSP JYK05_RS05095 PF02824 TGS domain JYK05_RS05095 PF04607 Region found in RelA / SpoT proteins JYK05_RS05095 PF13291 ACT domain JYK05_RS05105 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYK05_RS05105 PF02824 TGS domain JYK05_RS05105 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYK05_RS05105 PF03129 Anticodon binding domain JYK05_RS05110 PF05198 Translation initiation factor IF-3, N-terminal domain JYK05_RS05110 PF00707 Translation initiation factor IF-3, C-terminal domain JYK05_RS05115 PF01632 Ribosomal protein L35 JYK05_RS05120 PF00453 Ribosomal protein L20 JYK05_RS05125 PF01409 tRNA synthetases class II core domain (F) JYK05_RS05125 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JYK05_RS05130 PF01588 Putative tRNA binding domain JYK05_RS05130 PF03147 Ferredoxin-fold anticodon binding domain JYK05_RS05130 PF03484 tRNA synthetase B5 domain JYK05_RS05130 PF03483 B3/4 domain JYK05_RS05130 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JYK05_RS05135 PF00216 Bacterial DNA-binding protein JYK05_RS05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS05165 PF03466 LysR substrate binding domain JYK05_RS05170 PF03466 LysR substrate binding domain JYK05_RS05170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS05175 PF01614 Bacterial transcriptional regulator JYK05_RS05175 PF09339 IclR helix-turn-helix domain JYK05_RS05180 PF01144 Coenzyme A transferase JYK05_RS05185 PF01144 Coenzyme A transferase JYK05_RS05190 PF02803 Thiolase, C-terminal domain JYK05_RS05190 PF00108 Thiolase, N-terminal domain JYK05_RS05195 PF10397 Adenylosuccinate lyase C-terminus JYK05_RS05195 PF00206 Lyase JYK05_RS05200 PF12146 Serine aminopeptidase, S33 JYK05_RS05205 PF02627 Carboxymuconolactone decarboxylase family JYK05_RS05220 PF06804 NlpB/DapX lipoprotein JYK05_RS05235 PF01274 Malate synthase JYK05_RS05245 PF03466 LysR substrate binding domain JYK05_RS05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS05250 PF00582 Universal stress protein family JYK05_RS05255 PF00463 Isocitrate lyase family JYK05_RS05260 PF00270 DEAD/DEAH box helicase JYK05_RS05260 PF00271 Helicase conserved C-terminal domain JYK05_RS05270 PF00814 Glycoprotease family JYK05_RS05280 PF03167 Uracil DNA glycosylase superfamily JYK05_RS05305 PF08543 Phosphomethylpyrimidine kinase JYK05_RS05310 PF02581 Thiamine monophosphate synthase JYK05_RS05315 PF02110 Hydroxyethylthiazole kinase family JYK05_RS05320 PF07690 Major Facilitator Superfamily JYK05_RS05325 PF00842 Alanine racemase, C-terminal domain JYK05_RS05325 PF01168 Alanine racemase, N-terminal domain JYK05_RS05330 PF18073 Rubredoxin metal binding domain JYK05_RS05340 PF02515 CoA-transferase family III JYK05_RS05345 PF12848 ABC transporter JYK05_RS05345 PF00005 ABC transporter JYK05_RS05350 PF00255 Glutathione peroxidase JYK05_RS05355 PF13091 PLD-like domain JYK05_RS05360 PF05175 Methyltransferase small domain JYK05_RS05365 PF07687 Peptidase dimerisation domain JYK05_RS05365 PF01546 Peptidase family M20/M25/M40 JYK05_RS05370 PF03960 ArsC family JYK05_RS05375 PF00132 Bacterial transferase hexapeptide (six repeats) JYK05_RS05375 PF14602 Hexapeptide repeat of succinyl-transferase JYK05_RS05375 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JYK05_RS05380 PF00155 Aminotransferase class I and II JYK05_RS05390 PF02463 RecF/RecN/SMC N terminal domain JYK05_RS05390 PF06470 SMC proteins Flexible Hinge Domain JYK05_RS05400 PF00533 BRCA1 C Terminus (BRCT) domain JYK05_RS05400 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JYK05_RS05400 PF03120 NAD-dependent DNA ligase OB-fold domain JYK05_RS05400 PF01653 NAD-dependent DNA ligase adenylation domain JYK05_RS05400 PF12826 Helix-hairpin-helix motif JYK05_RS05405 PF01327 Polypeptide deformylase JYK05_RS05415 PF00849 RNA pseudouridylate synthase JYK05_RS05415 PF01479 S4 domain JYK05_RS05420 PF08335 GlnD PII-uridylyltransferase JYK05_RS05420 PF01966 HD domain JYK05_RS05420 PF01909 Nucleotidyltransferase domain JYK05_RS05425 PF00557 Metallopeptidase family M24 JYK05_RS05430 PF00318 Ribosomal protein S2 JYK05_RS05435 PF00889 Elongation factor TS JYK05_RS05440 PF00696 Amino acid kinase family JYK05_RS05445 PF01765 Ribosome recycling factor JYK05_RS05450 PF01255 Putative undecaprenyl diphosphate synthase JYK05_RS05460 PF13288 DXP reductoisomerase C-terminal domain JYK05_RS05460 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JYK05_RS05460 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JYK05_RS05465 PF02163 Peptidase family M50 JYK05_RS05465 PF17820 PDZ domain JYK05_RS05470 PF01103 Surface antigen JYK05_RS05470 PF07244 Surface antigen variable number repeat JYK05_RS05475 PF03938 Outer membrane protein (OmpH-like) JYK05_RS05480 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JYK05_RS05480 PF00132 Bacterial transferase hexapeptide (six repeats) JYK05_RS05485 PF07977 FabA-like domain JYK05_RS05490 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JYK05_RS05490 PF00132 Bacterial transferase hexapeptide (six repeats) JYK05_RS05495 PF02684 Lipid-A-disaccharide synthetase JYK05_RS05500 PF01351 Ribonuclease HII JYK05_RS05505 PF00588 SpoU rRNA Methylase family JYK05_RS05505 PF08032 RNA 2'-O ribose methyltransferase substrate binding JYK05_RS05510 PF03618 Kinase/pyrophosphorylase JYK05_RS05515 PF02896 PEP-utilising enzyme, TIM barrel domain JYK05_RS05515 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JYK05_RS05515 PF00391 PEP-utilising enzyme, mobile domain JYK05_RS05525 PF16200 C-terminal region of band_7 JYK05_RS05525 PF01145 SPFH domain / Band 7 family JYK05_RS05530 PF01668 SmpB protein JYK05_RS05540 PF03658 RnfH family Ubiquitin JYK05_RS05545 PF00892 EamA-like transporter family JYK05_RS05550 PF00571 CBS domain JYK05_RS05550 PF00478 IMP dehydrogenase / GMP reductase domain JYK05_RS05560 PF02540 NAD synthase JYK05_RS05560 PF00117 Glutamine amidotransferase class-I JYK05_RS05560 PF00958 GMP synthase C terminal domain JYK05_RS05580 PF01427 D-ala-D-ala dipeptidase JYK05_RS05585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK05_RS05590 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS05595 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK05_RS05595 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS05600 PF00005 ABC transporter JYK05_RS05600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK05_RS05605 PF00005 ABC transporter JYK05_RS05605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK05_RS05610 PF09350 Domain of unknown function (DUF1992) JYK05_RS05615 PF14437 MafB19-like deaminase JYK05_RS05620 PF02016 LD-carboxypeptidase N-terminal domain JYK05_RS05620 PF17676 LD-carboxypeptidase C-terminal domain JYK05_RS05625 PF07729 FCD domain JYK05_RS05625 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS05630 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JYK05_RS05635 PF01177 Asp/Glu/Hydantoin racemase JYK05_RS05645 PF01014 Uricase JYK05_RS05645 PF09349 OHCU decarboxylase JYK05_RS05650 PF03561 Allantoicase repeat JYK05_RS05655 PF04115 Ureidoglycolate lyase JYK05_RS05660 PF01212 Beta-eliminating lyase JYK05_RS05670 PF00576 HIUase/Transthyretin family JYK05_RS05675 PF01979 Amidohydrolase family JYK05_RS05680 PF03466 LysR substrate binding domain JYK05_RS05680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS05685 PF00005 ABC transporter JYK05_RS05690 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS05695 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS05700 PF02608 ABC transporter substrate-binding protein PnrA-like JYK05_RS05705 PF07311 Dodecin JYK05_RS05715 PF01741 Large-conductance mechanosensitive channel, MscL JYK05_RS05725 PF00128 Alpha amylase, catalytic domain JYK05_RS05725 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYK05_RS05745 PF00905 Penicillin binding protein transpeptidase domain JYK05_RS05745 PF00912 Transglycosylase JYK05_RS05745 PF17092 Penicillin-binding protein OB-like domain JYK05_RS05755 PF04234 CopC domain JYK05_RS05825 PF03928 Haem-degrading JYK05_RS05875 PF01207 Dihydrouridine synthase (Dus) JYK05_RS05910 PF07690 Major Facilitator Superfamily JYK05_RS05915 PF00248 Aldo/keto reductase family JYK05_RS05920 PF02779 Transketolase, pyrimidine binding domain JYK05_RS05920 PF02780 Transketolase, C-terminal domain JYK05_RS05920 PF00456 Transketolase, thiamine diphosphate binding domain JYK05_RS05925 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK05_RS05925 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JYK05_RS05930 PF01061 ABC-2 type transporter JYK05_RS05935 PF00005 ABC transporter JYK05_RS05955 PF00717 Peptidase S24-like JYK05_RS05955 PF01726 LexA DNA binding domain JYK05_RS05965 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS05970 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS05975 PF12857 TOBE-like domain JYK05_RS05975 PF00005 ABC transporter JYK05_RS05980 PF03466 LysR substrate binding domain JYK05_RS05980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS05985 PF17763 Glutaminase/Asparaginase C-terminal domain JYK05_RS05985 PF00710 Asparaginase, N-terminal JYK05_RS05990 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYK05_RS05990 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK05_RS05995 PF01261 Xylose isomerase-like TIM barrel JYK05_RS06000 PF00205 Thiamine pyrophosphate enzyme, central domain JYK05_RS06000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK05_RS06000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK05_RS06005 PF03466 LysR substrate binding domain JYK05_RS06005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS06010 PF01250 Ribosomal protein S6 JYK05_RS06020 PF01084 Ribosomal protein S18 JYK05_RS06025 PF01281 Ribosomal protein L9, N-terminal domain JYK05_RS06025 PF03948 Ribosomal protein L9, C-terminal domain JYK05_RS06030 PF00772 DnaB-like helicase N terminal domain JYK05_RS06030 PF03796 DnaB-like helicase C terminal domain JYK05_RS06040 PF01384 Phosphate transporter family JYK05_RS06055 PF02562 PhoH-like protein JYK05_RS06055 PF13638 PIN domain JYK05_RS06060 PF00578 AhpC/TSA family JYK05_RS06065 PF01522 Polysaccharide deacetylase JYK05_RS06070 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS06070 PF02911 Formyl transferase, C-terminal domain JYK05_RS06070 PF00551 Formyl transferase JYK05_RS06075 PF02911 Formyl transferase, C-terminal domain JYK05_RS06075 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS06075 PF00551 Formyl transferase JYK05_RS06080 PF00535 Glycosyl transferase family 2 JYK05_RS06085 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JYK05_RS06090 PF00892 EamA-like transporter family JYK05_RS06095 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JYK05_RS06100 PF04430 Protein of unknown function (DUF498/DUF598) JYK05_RS06105 PF00155 Aminotransferase class I and II JYK05_RS06110 PF01842 ACT domain JYK05_RS06110 PF00742 Homoserine dehydrogenase JYK05_RS06110 PF03447 Homoserine dehydrogenase, NAD binding domain JYK05_RS06115 PF00291 Pyridoxal-phosphate dependent enzyme JYK05_RS06115 PF14821 Threonine synthase N terminus JYK05_RS06120 PF00005 ABC transporter JYK05_RS06120 PF12848 ABC transporter JYK05_RS06135 PF01566 Natural resistance-associated macrophage protein JYK05_RS06140 PF13416 Bacterial extracellular solute-binding protein JYK05_RS06145 PF08402 TOBE domain JYK05_RS06145 PF00005 ABC transporter JYK05_RS06150 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS06155 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS06160 PF00291 Pyridoxal-phosphate dependent enzyme JYK05_RS06165 PF01546 Peptidase family M20/M25/M40 JYK05_RS06165 PF07687 Peptidase dimerisation domain JYK05_RS06170 PF00270 DEAD/DEAH box helicase JYK05_RS06170 PF03461 TRCF domain JYK05_RS06170 PF02559 CarD-like/TRCF domain JYK05_RS06170 PF00271 Helicase conserved C-terminal domain JYK05_RS06170 PF17757 UvrB interaction domain JYK05_RS06175 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JYK05_RS06180 PF02542 YgbB family JYK05_RS06185 PF02627 Carboxymuconolactone decarboxylase family JYK05_RS06190 PF00578 AhpC/TSA family JYK05_RS06195 PF00672 HAMP domain JYK05_RS06195 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS06200 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS06200 PF00072 Response regulator receiver domain JYK05_RS06245 PF02595 Glycerate kinase family JYK05_RS06250 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYK05_RS06250 PF05698 Bacterial trigger factor protein (TF) C-terminus JYK05_RS06250 PF05697 Bacterial trigger factor protein (TF) JYK05_RS06255 PF00574 Clp protease JYK05_RS06260 PF07724 AAA domain (Cdc48 subfamily) JYK05_RS06260 PF10431 C-terminal, D2-small domain, of ClpB protein JYK05_RS06260 PF06689 ClpX C4-type zinc finger JYK05_RS06265 PF05362 Lon protease (S16) C-terminal proteolytic domain JYK05_RS06265 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS06265 PF02190 ATP-dependent protease La (LON) substrate-binding domain JYK05_RS06270 PF00216 Bacterial DNA-binding protein JYK05_RS06295 PF13472 GDSL-like Lipase/Acylhydrolase family JYK05_RS06300 PF00005 ABC transporter JYK05_RS06305 PF00342 Phosphoglucose isomerase JYK05_RS06310 PF01256 Carbohydrate kinase JYK05_RS06315 PF01266 FAD dependent oxidoreductase JYK05_RS06320 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JYK05_RS06320 PF02769 AIR synthase related protein, C-terminal domain JYK05_RS06320 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JYK05_RS06335 PF04279 Intracellular septation protein A JYK05_RS06340 PF01641 SelR domain JYK05_RS06345 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JYK05_RS06350 PF00501 AMP-binding enzyme JYK05_RS06350 PF13193 AMP-binding enzyme C-terminal domain JYK05_RS06355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK05_RS06355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK05_RS06355 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS06360 PF00857 Isochorismatase family JYK05_RS06375 PF00107 Zinc-binding dehydrogenase JYK05_RS06375 PF16884 N-terminal domain of oxidoreductase JYK05_RS06380 PF00106 short chain dehydrogenase JYK05_RS06385 PF07859 alpha/beta hydrolase fold JYK05_RS06400 PF01571 Aminomethyltransferase folate-binding domain JYK05_RS06410 PF02618 YceG-like family JYK05_RS06415 PF02223 Thymidylate kinase JYK05_RS06420 PF09115 DNA polymerase III, delta subunit, C terminal JYK05_RS06425 PF00583 Acetyltransferase (GNAT) family JYK05_RS06430 PF01026 TatD related DNase JYK05_RS06445 PF00982 Glycosyltransferase family 20 JYK05_RS06450 PF00534 Glycosyl transferases group 1 JYK05_RS06450 PF13439 Glycosyltransferase Family 4 JYK05_RS06475 PF13407 Periplasmic binding protein domain JYK05_RS06480 PF00005 ABC transporter JYK05_RS06485 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS06490 PF00356 Bacterial regulatory proteins, lacI family JYK05_RS06495 PF00294 pfkB family carbohydrate kinase JYK05_RS06500 PF02203 Tar ligand binding domain homologue JYK05_RS06500 PF00672 HAMP domain JYK05_RS06500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS06510 PF06798 PrkA serine protein kinase C-terminal domain JYK05_RS06510 PF08298 PrkA AAA domain JYK05_RS06515 PF04285 Protein of unknown function (DUF444) JYK05_RS06520 PF04293 SpoVR like protein JYK05_RS06525 PF01594 AI-2E family transporter JYK05_RS06530 PF00892 EamA-like transporter family JYK05_RS06535 PF00248 Aldo/keto reductase family JYK05_RS06540 PF07690 Major Facilitator Superfamily JYK05_RS06545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS06545 PF03466 LysR substrate binding domain JYK05_RS06550 PF07519 Tannase and feruloyl esterase JYK05_RS06565 PF03795 YCII-related domain JYK05_RS06575 PF08281 Sigma-70, region 4 JYK05_RS06575 PF04542 Sigma-70 region 2 JYK05_RS06600 PF13614 AAA domain JYK05_RS06600 PF02706 Chain length determinant protein JYK05_RS06600 PF13807 G-rich domain on putative tyrosine kinase JYK05_RS06625 PF00484 Carbonic anhydrase JYK05_RS06670 PF03466 LysR substrate binding domain JYK05_RS06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS06675 PF03595 Voltage-dependent anion channel JYK05_RS06695 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JYK05_RS06705 PF03631 Virulence factor BrkB JYK05_RS06710 PF00892 EamA-like transporter family JYK05_RS06720 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS06720 PF00563 EAL domain JYK05_RS06720 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS06725 PF04381 Putative exonuclease, RdgC JYK05_RS06780 PF13609 Gram-negative porin JYK05_RS06800 PF00023 Ankyrin repeat JYK05_RS06800 PF12796 Ankyrin repeats (3 copies) JYK05_RS06810 PF07690 Major Facilitator Superfamily JYK05_RS06820 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS06820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYK05_RS06835 PF16653 Saccharopine dehydrogenase C-terminal domain JYK05_RS06835 PF03435 Saccharopine dehydrogenase NADP binding domain JYK05_RS06865 PF00356 Bacterial regulatory proteins, lacI family JYK05_RS06870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYK05_RS06870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK05_RS06875 PF07690 Major Facilitator Superfamily JYK05_RS06880 PF00294 pfkB family carbohydrate kinase JYK05_RS06890 PF03466 LysR substrate binding domain JYK05_RS06890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS06895 PF03601 Conserved hypothetical protein 698 JYK05_RS06905 PF01053 Cys/Met metabolism PLP-dependent enzyme JYK05_RS06915 PF00248 Aldo/keto reductase family JYK05_RS06920 PF00654 Voltage gated chloride channel JYK05_RS06935 PF05170 AsmA family JYK05_RS06940 PF00005 ABC transporter JYK05_RS06945 PF03649 Uncharacterised protein family (UPF0014) JYK05_RS06955 PF18029 Glyoxalase-like domain JYK05_RS06960 PF00072 Response regulator receiver domain JYK05_RS06960 PF09456 RcsC Alpha-Beta-Loop (ABL) JYK05_RS06960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS06960 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS06965 PF00072 Response regulator receiver domain JYK05_RS06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS06970 PF01590 GAF domain JYK05_RS06970 PF00360 Phytochrome region JYK05_RS06970 PF08446 PAS fold JYK05_RS06970 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS06985 PF04679 ATP dependent DNA ligase C terminal region JYK05_RS06985 PF01068 ATP dependent DNA ligase domain JYK05_RS06985 PF13298 DNA polymerase Ligase (LigD) JYK05_RS06990 PF02735 Ku70/Ku80 beta-barrel domain JYK05_RS07000 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS07000 PF00107 Zinc-binding dehydrogenase JYK05_RS07005 PF03466 LysR substrate binding domain JYK05_RS07005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS07015 PF01053 Cys/Met metabolism PLP-dependent enzyme JYK05_RS07025 PF00108 Thiolase, N-terminal domain JYK05_RS07025 PF02803 Thiolase, C-terminal domain JYK05_RS07030 PF00294 pfkB family carbohydrate kinase JYK05_RS07035 PF00919 Uncharacterized protein family UPF0004 JYK05_RS07035 PF18693 TRAM domain JYK05_RS07035 PF04055 Radical SAM superfamily JYK05_RS07040 PF07879 PHB/PHA accumulation regulator DNA-binding domain JYK05_RS07040 PF05233 PHB accumulation regulatory domain JYK05_RS07045 PF00106 short chain dehydrogenase JYK05_RS07050 PF02803 Thiolase, C-terminal domain JYK05_RS07050 PF00108 Thiolase, N-terminal domain JYK05_RS07055 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JYK05_RS07060 PF02578 Multi-copper polyphenol oxidoreductase laccase JYK05_RS07065 PF01479 S4 domain JYK05_RS07065 PF00849 RNA pseudouridylate synthase JYK05_RS07070 PF13525 Outer membrane lipoprotein JYK05_RS07080 PF04851 Type III restriction enzyme, res subunit JYK05_RS07080 PF13307 Helicase C-terminal domain JYK05_RS07100 PF17674 HHH domain JYK05_RS07100 PF00575 S1 RNA binding domain JYK05_RS07100 PF09371 Tex-like protein N-terminal domain JYK05_RS07100 PF16921 Tex protein YqgF-like domain JYK05_RS07105 PF02705 K+ potassium transporter JYK05_RS07110 PF00156 Phosphoribosyl transferase domain JYK05_RS07115 PF00709 Adenylosuccinate synthetase JYK05_RS07120 PF13393 Histidyl-tRNA synthetase JYK05_RS07125 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JYK05_RS07130 PF01145 SPFH domain / Band 7 family JYK05_RS07135 PF12221 Bacterial membrane protein N terminal JYK05_RS07135 PF01145 SPFH domain / Band 7 family JYK05_RS07140 PF13167 GTP-binding GTPase N-terminal JYK05_RS07140 PF01926 50S ribosome-binding GTPase JYK05_RS07140 PF16360 GTP-binding GTPase Middle Region JYK05_RS07145 PF17209 Hfq protein JYK05_RS07150 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JYK05_RS07150 PF01926 50S ribosome-binding GTPase JYK05_RS07155 PF13360 PQQ-like domain JYK05_RS07165 PF03129 Anticodon binding domain JYK05_RS07165 PF13393 Histidyl-tRNA synthetase JYK05_RS07170 PF04551 GcpE protein JYK05_RS07180 PF04055 Radical SAM superfamily JYK05_RS07185 PF00334 Nucleoside diphosphate kinase JYK05_RS07190 PF01027 Inhibitor of apoptosis-promoting Bax1 JYK05_RS07195 PF05958 tRNA (Uracil-5-)-methyltransferase JYK05_RS07205 PF04545 Sigma-70, region 4 JYK05_RS07205 PF04539 Sigma-70 region 3 JYK05_RS07205 PF04542 Sigma-70 region 2 JYK05_RS07205 PF00140 Sigma-70 factor, region 1.2 JYK05_RS07210 PF01551 Peptidase family M23 JYK05_RS07210 PF01476 LysM domain JYK05_RS07220 PF01975 Survival protein SurE JYK05_RS07225 PF08659 KR domain JYK05_RS07225 PF14765 Polyketide synthase dehydratase JYK05_RS07225 PF00698 Acyl transferase domain JYK05_RS07225 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS07225 PF08990 Erythronolide synthase docking JYK05_RS07225 PF00550 Phosphopantetheine attachment site JYK05_RS07225 PF09277 Erythronolide synthase, docking JYK05_RS07225 PF16197 Ketoacyl-synthetase C-terminal extension JYK05_RS07225 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK05_RS07225 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK05_RS07230 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS07235 PF00005 ABC transporter JYK05_RS07240 PF09084 NMT1/THI5 like JYK05_RS07245 PF02515 CoA-transferase family III JYK05_RS07255 PF13662 Toprim domain JYK05_RS07255 PF02132 RecR protein JYK05_RS07260 PF02575 YbaB/EbfC DNA-binding family JYK05_RS07265 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JYK05_RS07265 PF12169 DNA polymerase III subunits gamma and tau domain III JYK05_RS07265 PF12170 DNA polymerase III tau subunit V interacting with alpha JYK05_RS07275 PF00085 Thioredoxin JYK05_RS07280 PF07497 Rho termination factor, RNA-binding domain JYK05_RS07280 PF07498 Rho termination factor, N-terminal domain JYK05_RS07280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYK05_RS07285 PF06167 Glucose-regulated metallo-peptidase M90 JYK05_RS07290 PF01197 Ribosomal protein L31 JYK05_RS07300 PF01554 MatE JYK05_RS07305 PF07703 Alpha-2-macroglobulin bait region domain JYK05_RS07305 PF00207 Alpha-2-macroglobulin family JYK05_RS07305 PF01835 MG2 domain JYK05_RS07310 PF00912 Transglycosylase JYK05_RS07310 PF00905 Penicillin binding protein transpeptidase domain JYK05_RS07325 PF02861 Clp amino terminal domain, pathogenicity island component JYK05_RS07325 PF17871 AAA lid domain JYK05_RS07325 PF07724 AAA domain (Cdc48 subfamily) JYK05_RS07325 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS07325 PF10431 C-terminal, D2-small domain, of ClpB protein JYK05_RS07330 PF02082 Transcriptional regulator JYK05_RS07340 PF02391 MoaE protein JYK05_RS07345 PF02597 ThiS family JYK05_RS07350 PF03453 MoeA N-terminal region (domain I and II) JYK05_RS07350 PF03454 MoeA C-terminal region (domain IV) JYK05_RS07350 PF00994 Probable molybdopterin binding domain JYK05_RS07360 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JYK05_RS07365 PF04376 Arginine-tRNA-protein transferase, N terminus JYK05_RS07365 PF04377 Arginine-tRNA-protein transferase, C terminus JYK05_RS07370 PF01180 Dihydroorotate dehydrogenase JYK05_RS07375 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS07380 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS07385 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK05_RS07385 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK05_RS07395 PF13439 Glycosyltransferase Family 4 JYK05_RS07395 PF00534 Glycosyl transferases group 1 JYK05_RS07415 PF02397 Bacterial sugar transferase JYK05_RS07420 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JYK05_RS07420 PF04198 Putative sugar-binding domain JYK05_RS07425 PF04247 Invasion gene expression up-regulator, SirB JYK05_RS07430 PF01510 N-acetylmuramoyl-L-alanine amidase JYK05_RS07435 PF08032 RNA 2'-O ribose methyltransferase substrate binding JYK05_RS07435 PF00588 SpoU rRNA Methylase family JYK05_RS07440 PF00773 RNB domain JYK05_RS07440 PF00575 S1 RNA binding domain JYK05_RS07440 PF17876 Cold shock domain JYK05_RS07440 PF08461 Ribonuclease R winged-helix domain JYK05_RS07440 PF08206 Ribonuclease B OB domain JYK05_RS07455 PF07690 Major Facilitator Superfamily JYK05_RS07470 PF01975 Survival protein SurE JYK05_RS07485 PF03969 AFG1-like ATPase JYK05_RS07490 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYK05_RS07490 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS07495 PF00364 Biotin-requiring enzyme JYK05_RS07495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JYK05_RS07495 PF02817 e3 binding domain JYK05_RS07500 PF16870 2-oxoglutarate dehydrogenase C-terminal JYK05_RS07500 PF00676 Dehydrogenase E1 component JYK05_RS07500 PF16078 2-oxoglutarate dehydrogenase N-terminus JYK05_RS07500 PF02779 Transketolase, pyrimidine binding domain JYK05_RS07505 PF00679 Elongation factor G C-terminus JYK05_RS07505 PF00009 Elongation factor Tu GTP binding domain JYK05_RS07505 PF03144 Elongation factor Tu domain 2 JYK05_RS07510 PF01047 MarR family JYK05_RS07515 PF02321 Outer membrane efflux protein JYK05_RS07520 PF00529 HlyD membrane-fusion protein of T1SS JYK05_RS07520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYK05_RS07525 PF07690 Major Facilitator Superfamily JYK05_RS07530 PF01509 TruB family pseudouridylate synthase (N terminal domain) JYK05_RS07530 PF09157 Pseudouridine synthase II TruB, C-terminal JYK05_RS07530 PF16198 tRNA pseudouridylate synthase B C-terminal domain JYK05_RS07535 PF02033 Ribosome-binding factor A JYK05_RS07540 PF04760 Translation initiation factor IF-2, N-terminal region JYK05_RS07540 PF00009 Elongation factor Tu GTP binding domain JYK05_RS07540 PF11987 Translation-initiation factor 2 JYK05_RS07540 PF08364 Bacterial translation initiation factor IF-2 associated region JYK05_RS07545 PF08529 NusA N-terminal domain JYK05_RS07545 PF13184 NusA-like KH domain JYK05_RS07550 PF17384 RimP C-terminal SH3 domain JYK05_RS07550 PF02576 RimP N-terminal domain JYK05_RS07555 PF01479 S4 domain JYK05_RS07555 PF00849 RNA pseudouridylate synthase JYK05_RS07560 PF04079 Segregation and condensation complex subunit ScpB JYK05_RS07565 PF00155 Aminotransferase class I and II JYK05_RS07570 PF03466 LysR substrate binding domain JYK05_RS07570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS07640 PF00749 tRNA synthetases class I (E and Q), catalytic domain JYK05_RS07645 PF01734 Patatin-like phospholipase JYK05_RS07650 PF00034 Cytochrome c JYK05_RS07650 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK05_RS07650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS07655 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS07655 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK05_RS07655 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK05_RS07655 PF01799 [2Fe-2S] binding domain JYK05_RS07665 PF04384 Iron-sulphur cluster assembly JYK05_RS07670 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS07675 PF00012 Hsp70 protein JYK05_RS07680 PF07743 HSCB C-terminal oligomerisation domain JYK05_RS07685 PF01521 Iron-sulphur cluster biosynthesis JYK05_RS07690 PF01592 NifU-like N terminal domain JYK05_RS07695 PF00266 Aminotransferase class-V JYK05_RS07700 PF02082 Transcriptional regulator JYK05_RS07705 PF01451 Low molecular weight phosphotyrosine protein phosphatase JYK05_RS07720 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JYK05_RS07740 PF09278 MerR, DNA binding JYK05_RS07740 PF00376 MerR family regulatory protein JYK05_RS07750 PF04321 RmlD substrate binding domain JYK05_RS07755 PF02811 PHP domain JYK05_RS07755 PF14579 Helix-hairpin-helix motif JYK05_RS07755 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYK05_RS07755 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYK05_RS07800 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS07800 PF00072 Response regulator receiver domain JYK05_RS07815 PF18027 Cytosolic carboxypeptidase N-terminal domain JYK05_RS07815 PF00246 Zinc carboxypeptidase JYK05_RS07820 PF03883 Peroxide stress protein YaaA JYK05_RS07830 PF00155 Aminotransferase class I and II JYK05_RS07835 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK05_RS07835 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK05_RS07835 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JYK05_RS07840 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS07855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS07855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS07855 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS07860 PF02798 Glutathione S-transferase, N-terminal domain JYK05_RS07860 PF00043 Glutathione S-transferase, C-terminal domain JYK05_RS07875 PF00293 NUDIX domain JYK05_RS07885 PF00361 Proton-conducting membrane transporter JYK05_RS07890 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus JYK05_RS07890 PF00361 Proton-conducting membrane transporter JYK05_RS07895 PF00361 Proton-conducting membrane transporter JYK05_RS07895 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JYK05_RS07900 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JYK05_RS07905 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JYK05_RS07910 PF12838 4Fe-4S dicluster domain JYK05_RS07915 PF00146 NADH dehydrogenase JYK05_RS07920 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal JYK05_RS07920 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JYK05_RS07920 PF00384 Molybdopterin oxidoreductase JYK05_RS07925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JYK05_RS07925 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JYK05_RS07925 PF10531 SLBB domain JYK05_RS07935 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JYK05_RS07940 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JYK05_RS07945 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JYK05_RS07950 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JYK05_RS07960 PF03840 Preprotein translocase SecG subunit JYK05_RS07965 PF00121 Triosephosphate isomerase JYK05_RS07970 PF08659 KR domain JYK05_RS07970 PF00698 Acyl transferase domain JYK05_RS07970 PF14765 Polyketide synthase dehydratase JYK05_RS07970 PF00550 Phosphopantetheine attachment site JYK05_RS07970 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS07975 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JYK05_RS07975 PF01138 3' exoribonuclease family, domain 1 JYK05_RS07975 PF03725 3' exoribonuclease family, domain 2 JYK05_RS07975 PF00575 S1 RNA binding domain JYK05_RS07975 PF00013 KH domain JYK05_RS07980 PF00312 Ribosomal protein S15 JYK05_RS07985 PF13458 Periplasmic binding protein JYK05_RS07995 PF08502 LeuA allosteric (dimerisation) domain JYK05_RS07995 PF00682 HMGL-like JYK05_RS08000 PF00877 NlpC/P60 family JYK05_RS08005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK05_RS08005 PF00005 ABC transporter JYK05_RS08010 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS08010 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK05_RS08015 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS08020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK05_RS08040 PF07690 Major Facilitator Superfamily JYK05_RS08050 PF16957 Malonate decarboxylase, alpha subunit, transporter JYK05_RS08055 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JYK05_RS08060 PF06857 Malonate decarboxylase delta subunit (MdcD) JYK05_RS08065 PF01039 Carboxyl transferase domain JYK05_RS08080 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JYK05_RS08085 PF00698 Acyl transferase domain JYK05_RS08090 PF01435 Peptidase family M48 JYK05_RS08100 PF13840 ACT domain JYK05_RS08100 PF01842 ACT domain JYK05_RS08100 PF00696 Amino acid kinase family JYK05_RS08105 PF09179 TilS substrate binding domain JYK05_RS08105 PF11734 TilS substrate C-terminal domain JYK05_RS08105 PF01171 PP-loop family JYK05_RS08110 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JYK05_RS08115 PF00730 HhH-GPD superfamily base excision DNA repair protein JYK05_RS08120 PF09190 DALR domain JYK05_RS08120 PF01406 tRNA synthetases class I (C) catalytic domain JYK05_RS08130 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JYK05_RS08135 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JYK05_RS08140 PF00149 Calcineurin-like phosphoesterase JYK05_RS08145 PF00132 Bacterial transferase hexapeptide (six repeats) JYK05_RS08150 PF00588 SpoU rRNA Methylase family JYK05_RS08155 PF00459 Inositol monophosphatase family JYK05_RS08160 PF07690 Major Facilitator Superfamily JYK05_RS08170 PF01624 MutS domain I JYK05_RS08170 PF05188 MutS domain II JYK05_RS08170 PF05190 MutS family domain IV JYK05_RS08170 PF05192 MutS domain III JYK05_RS08170 PF00488 MutS domain V JYK05_RS08180 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYK05_RS08185 PF08007 Cupin superfamily protein JYK05_RS08195 PF10996 Beta-Casp domain JYK05_RS08195 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JYK05_RS08195 PF00753 Metallo-beta-lactamase superfamily JYK05_RS08200 PF06804 NlpB/DapX lipoprotein JYK05_RS08205 PF00701 Dihydrodipicolinate synthetase family JYK05_RS08215 PF00579 tRNA synthetases class I (W and Y) JYK05_RS08220 PF02163 Peptidase family M50 JYK05_RS08225 PF01300 Telomere recombination JYK05_RS08230 PF02811 PHP domain JYK05_RS08235 PF00561 alpha/beta hydrolase fold JYK05_RS08240 PF04305 Protein of unknown function (DUF455) JYK05_RS08245 PF00132 Bacterial transferase hexapeptide (six repeats) JYK05_RS08250 PF01430 Hsp33 protein JYK05_RS08260 PF04977 Septum formation initiator JYK05_RS08265 PF03952 Enolase, N-terminal domain JYK05_RS08265 PF00113 Enolase, C-terminal TIM barrel domain JYK05_RS08270 PF00793 DAHP synthetase I family JYK05_RS08275 PF00117 Glutamine amidotransferase class-I JYK05_RS08275 PF06418 CTP synthase N-terminus JYK05_RS08285 PF00753 Metallo-beta-lactamase superfamily JYK05_RS08285 PF03772 Competence protein JYK05_RS08290 PF01026 TatD related DNase JYK05_RS08295 PF00005 ABC transporter JYK05_RS08300 PF12704 MacB-like periplasmic core domain JYK05_RS08300 PF02687 FtsX-like permease family JYK05_RS08310 PF17768 RecJ OB domain JYK05_RS08310 PF01368 DHH family JYK05_RS08310 PF02272 DHHA1 domain JYK05_RS08320 PF01336 OB-fold nucleic acid binding domain JYK05_RS08320 PF00152 tRNA synthetases class II (D, K and N) JYK05_RS08325 PF14338 Mrr N-terminal domain JYK05_RS08325 PF04471 Restriction endonuclease JYK05_RS08335 PF01066 CDP-alcohol phosphatidyltransferase JYK05_RS08340 PF02666 Phosphatidylserine decarboxylase JYK05_RS08345 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JYK05_RS08345 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JYK05_RS08350 PF10369 Small subunit of acetolactate synthase JYK05_RS08355 PF00205 Thiamine pyrophosphate enzyme, central domain JYK05_RS08355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK05_RS08355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK05_RS08390 PF01219 Prokaryotic diacylglycerol kinase JYK05_RS08395 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS08395 PF08360 QacR-like protein, C-terminal region JYK05_RS08400 PF03641 Possible lysine decarboxylase JYK05_RS08420 PF01411 tRNA synthetases class II (A) JYK05_RS08420 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYK05_RS08420 PF02272 DHHA1 domain JYK05_RS08440 PF00893 Small Multidrug Resistance protein JYK05_RS08445 PF01654 Cytochrome bd terminal oxidase subunit I JYK05_RS08450 PF02322 Cytochrome bd terminal oxidase subunit II JYK05_RS08460 PF00578 AhpC/TSA family JYK05_RS08465 PF08668 HDOD domain JYK05_RS08465 PF00563 EAL domain JYK05_RS08470 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS08470 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS08470 PF13188 PAS domain JYK05_RS08470 PF00563 EAL domain JYK05_RS08480 PF00672 HAMP domain JYK05_RS08480 PF02203 Tar ligand binding domain homologue JYK05_RS08480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS08485 PF07690 Major Facilitator Superfamily JYK05_RS08500 PF00501 AMP-binding enzyme JYK05_RS08500 PF16177 Acetyl-coenzyme A synthetase N-terminus JYK05_RS08500 PF13193 AMP-binding enzyme C-terminal domain JYK05_RS08515 PF01048 Phosphorylase superfamily JYK05_RS08520 PF13361 UvrD-like helicase C-terminal domain JYK05_RS08520 PF00580 UvrD/REP helicase N-terminal domain JYK05_RS08525 PF08264 Anticodon-binding domain of tRNA JYK05_RS08525 PF00133 tRNA synthetases class I (I, L, M and V) JYK05_RS08525 PF10458 Valyl tRNA synthetase tRNA binding arm JYK05_RS08530 PF00483 Nucleotidyl transferase JYK05_RS08535 PF01206 Sulfurtransferase TusA JYK05_RS08550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK05_RS08550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK05_RS08555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK05_RS08555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK05_RS08560 PF01418 Helix-turn-helix domain, rpiR family JYK05_RS08560 PF01380 SIS domain JYK05_RS08570 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS08575 PF00005 ABC transporter JYK05_RS08580 PF00294 pfkB family carbohydrate kinase JYK05_RS08585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK05_RS08585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK05_RS08585 PF00205 Thiamine pyrophosphate enzyme, central domain JYK05_RS08590 PF01261 Xylose isomerase-like TIM barrel JYK05_RS08595 PF04962 KduI/IolB family JYK05_RS08600 PF00005 ABC transporter JYK05_RS08605 PF00005 ABC transporter JYK05_RS08605 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYK05_RS08615 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS08620 PF03061 Thioesterase superfamily JYK05_RS08625 PF00465 Iron-containing alcohol dehydrogenase JYK05_RS08630 PF01212 Beta-eliminating lyase JYK05_RS08640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JYK05_RS08640 PF02272 DHHA1 domain JYK05_RS08640 PF01411 tRNA synthetases class II (A) JYK05_RS08645 PF02515 CoA-transferase family III JYK05_RS08655 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JYK05_RS08655 PF00749 tRNA synthetases class I (E and Q), catalytic domain JYK05_RS08660 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS08665 PF00293 NUDIX domain JYK05_RS08685 PF13356 Arm DNA-binding domain JYK05_RS08685 PF00589 Phage integrase family JYK05_RS08720 PF17762 HTH domain found in ParB protein JYK05_RS08720 PF02195 ParB-like nuclease domain JYK05_RS08730 PF00589 Phage integrase family JYK05_RS08730 PF02899 Phage integrase, N-terminal SAM-like domain JYK05_RS08745 PF01068 ATP dependent DNA ligase domain JYK05_RS08745 PF04679 ATP dependent DNA ligase C terminal region JYK05_RS08745 PF13298 DNA polymerase Ligase (LigD) JYK05_RS08775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYK05_RS08775 PF02811 PHP domain JYK05_RS08775 PF14579 Helix-hairpin-helix motif JYK05_RS08775 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYK05_RS08810 PF02673 Bacitracin resistance protein BacA JYK05_RS08815 PF01263 Aldose 1-epimerase JYK05_RS08820 PF01551 Peptidase family M23 JYK05_RS08820 PF01476 LysM domain JYK05_RS08850 PF02541 Ppx/GppA phosphatase family JYK05_RS08855 PF02503 Polyphosphate kinase middle domain JYK05_RS08855 PF13089 Polyphosphate kinase N-terminal domain JYK05_RS08855 PF17941 Polyphosphate kinase C-terminal domain 1 JYK05_RS08855 PF13090 Polyphosphate kinase C-terminal domain 2 JYK05_RS08860 PF00989 PAS fold JYK05_RS08860 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS08860 PF11808 Phosphate regulon sensor protein PhoR JYK05_RS08865 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS08865 PF00072 Response regulator receiver domain JYK05_RS08870 PF01895 PhoU domain JYK05_RS08875 PF00005 ABC transporter JYK05_RS08880 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS08885 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS08890 PF12849 PBP superfamily domain JYK05_RS08895 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYK05_RS08895 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYK05_RS08895 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYK05_RS08895 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYK05_RS08900 PF00809 Pterin binding enzyme JYK05_RS08905 PF17862 AAA+ lid domain JYK05_RS08905 PF01434 Peptidase family M41 JYK05_RS08905 PF06480 FtsH Extracellular JYK05_RS08905 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS08910 PF01728 FtsJ-like methyltransferase JYK05_RS08915 PF01985 CRS1 / YhbY (CRM) domain JYK05_RS08925 PF03449 Transcription elongation factor, N-terminal JYK05_RS08925 PF01272 Transcription elongation factor, GreA/GreB, C-term JYK05_RS08930 PF02142 MGS-like domain JYK05_RS08930 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JYK05_RS08930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYK05_RS08935 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JYK05_RS08935 PF00117 Glutamine amidotransferase class-I JYK05_RS08945 PF01464 Transglycosylase SLT domain JYK05_RS08945 PF01476 LysM domain JYK05_RS08950 PF00753 Metallo-beta-lactamase superfamily JYK05_RS08950 PF16123 Hydroxyacylglutathione hydrolase C-terminus JYK05_RS08955 PF08241 Methyltransferase domain JYK05_RS08960 PF00075 RNase H JYK05_RS08965 PF00929 Exonuclease JYK05_RS08985 PF13439 Glycosyltransferase Family 4 JYK05_RS08985 PF00534 Glycosyl transferases group 1 JYK05_RS08990 PF00664 ABC transporter transmembrane region JYK05_RS08990 PF00005 ABC transporter JYK05_RS08995 PF00982 Glycosyltransferase family 20 JYK05_RS09000 PF02358 Trehalose-phosphatase JYK05_RS09005 PF02630 SCO1/SenC JYK05_RS09015 PF13673 Acetyltransferase (GNAT) domain JYK05_RS09035 PF01066 CDP-alcohol phosphatidyltransferase JYK05_RS09040 PF01541 GIY-YIG catalytic domain JYK05_RS09040 PF02151 UvrB/uvrC motif JYK05_RS09040 PF08459 UvrC Helix-hairpin-helix N-terminal JYK05_RS09050 PF09285 Elongation factor P, C-terminal JYK05_RS09050 PF01132 Elongation factor P (EF-P) OB domain JYK05_RS09050 PF08207 Elongation factor P (EF-P) KOW-like domain JYK05_RS09060 PF00072 Response regulator receiver domain JYK05_RS09060 PF00158 Sigma-54 interaction domain JYK05_RS09060 PF02954 Bacterial regulatory protein, Fis family JYK05_RS09065 PF00933 Glycosyl hydrolase family 3 N terminal domain JYK05_RS09070 PF01648 4'-phosphopantetheinyl transferase superfamily JYK05_RS09075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JYK05_RS09080 PF02565 Recombination protein O C terminal JYK05_RS09080 PF11967 Recombination protein O N terminal JYK05_RS09085 PF07650 KH domain JYK05_RS09085 PF01926 50S ribosome-binding GTPase JYK05_RS09090 PF14622 Ribonuclease-III-like JYK05_RS09090 PF00035 Double-stranded RNA binding motif JYK05_RS09095 PF10502 Signal peptidase, peptidase S26 JYK05_RS09100 PF00679 Elongation factor G C-terminus JYK05_RS09100 PF06421 GTP-binding protein LepA C-terminus JYK05_RS09100 PF00009 Elongation factor Tu GTP binding domain JYK05_RS09100 PF03144 Elongation factor Tu domain 2 JYK05_RS09110 PF13180 PDZ domain JYK05_RS09125 PF04542 Sigma-70 region 2 JYK05_RS09125 PF08281 Sigma-70, region 4 JYK05_RS09135 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK05_RS09135 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK05_RS09140 PF00550 Phosphopantetheine attachment site JYK05_RS09150 PF00698 Acyl transferase domain JYK05_RS09155 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK05_RS09155 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK05_RS09160 PF02504 Fatty acid synthesis protein JYK05_RS09165 PF01783 Ribosomal L32p protein family JYK05_RS09170 PF02620 Large ribosomal RNA subunit accumulation protein YceD JYK05_RS09175 PF02545 Maf-like protein JYK05_RS09180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK05_RS09185 PF06965 Na+/H+ antiporter 1 JYK05_RS09185 PF01343 Peptidase family S49 JYK05_RS09195 PF13419 Haloacid dehalogenase-like hydrolase JYK05_RS09200 PF00849 RNA pseudouridylate synthase JYK05_RS09200 PF01479 S4 domain JYK05_RS09205 PF00575 S1 RNA binding domain JYK05_RS09205 PF10150 Ribonuclease E/G family JYK05_RS09205 PF12111 Polyribonucleotide phosphorylase C terminal JYK05_RS09210 PF06463 Molybdenum Cofactor Synthesis C JYK05_RS09210 PF04055 Radical SAM superfamily JYK05_RS09215 PF12804 MobA-like NTP transferase domain JYK05_RS09220 PF03453 MoeA N-terminal region (domain I and II) JYK05_RS09220 PF00994 Probable molybdopterin binding domain JYK05_RS09220 PF03454 MoeA C-terminal region (domain IV) JYK05_RS09235 PF02646 RmuC family JYK05_RS09240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK05_RS09240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYK05_RS09255 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JYK05_RS09255 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JYK05_RS09260 PF00037 4Fe-4S binding domain JYK05_RS09260 PF11953 Domain of unknown function (DUF3470) JYK05_RS09285 PF13183 4Fe-4S dicluster domain JYK05_RS09285 PF02589 LUD domain JYK05_RS09285 PF11870 Domain of unknown function (DUF3390) JYK05_RS09290 PF02754 Cysteine-rich domain JYK05_RS09295 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS09295 PF07729 FCD domain JYK05_RS09300 PF05981 CreA protein JYK05_RS09325 PF13361 UvrD-like helicase C-terminal domain JYK05_RS09325 PF00580 UvrD/REP helicase N-terminal domain JYK05_RS09345 PF01554 MatE JYK05_RS09350 PF13091 PLD-like domain JYK05_RS09355 PF00206 Lyase JYK05_RS09355 PF10415 Fumarase C C-terminus JYK05_RS09375 PF00303 Thymidylate synthase JYK05_RS09380 PF00158 Sigma-54 interaction domain JYK05_RS09380 PF02954 Bacterial regulatory protein, Fis family JYK05_RS09380 PF00072 Response regulator receiver domain JYK05_RS09390 PF00186 Dihydrofolate reductase JYK05_RS09395 PF01523 Putative modulator of DNA gyrase JYK05_RS09400 PF04751 Protein of unknown function (DUF615) JYK05_RS09405 PF00994 Probable molybdopterin binding domain JYK05_RS09410 PF00929 Exonuclease JYK05_RS09415 PF01435 Peptidase family M48 JYK05_RS09420 PF03193 RsgA GTPase JYK05_RS09430 PF17113 Regulatory signalling modulator protein AmpE JYK05_RS09430 PF03186 CobD/Cbib protein JYK05_RS09440 PF01245 Ribosomal protein L19 JYK05_RS09445 PF01746 tRNA (Guanine-1)-methyltransferase JYK05_RS09450 PF05239 PRC-barrel domain JYK05_RS09450 PF01782 RimM N-terminal domain JYK05_RS09455 PF00886 Ribosomal protein S16 JYK05_RS09470 PF01037 Lrp/AsnC ligand binding domain JYK05_RS09475 PF01266 FAD dependent oxidoreductase JYK05_RS09480 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS09480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS09480 PF12806 Acetyl-CoA dehydrogenase C-terminal like JYK05_RS09480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS09485 PF00766 Electron transfer flavoprotein FAD-binding domain JYK05_RS09485 PF01012 Electron transfer flavoprotein domain JYK05_RS09490 PF01012 Electron transfer flavoprotein domain JYK05_RS09495 PF03180 NLPA lipoprotein JYK05_RS09500 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS09505 PF09383 NIL domain JYK05_RS09505 PF00005 ABC transporter JYK05_RS09510 PF00850 Histone deacetylase domain JYK05_RS09515 PF13406 Transglycosylase SLT domain JYK05_RS09520 PF00291 Pyridoxal-phosphate dependent enzyme JYK05_RS09530 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS09535 PF00294 pfkB family carbohydrate kinase JYK05_RS09540 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYK05_RS09540 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYK05_RS09540 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYK05_RS09545 PF18073 Rubredoxin metal binding domain JYK05_RS09555 PF00216 Bacterial DNA-binding protein JYK05_RS09560 PF00575 S1 RNA binding domain JYK05_RS09565 PF02224 Cytidylate kinase JYK05_RS09570 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYK05_RS09575 PF02153 Prephenate dehydrogenase JYK05_RS09575 PF01842 ACT domain JYK05_RS09580 PF01842 ACT domain JYK05_RS09580 PF00800 Prephenate dehydratase JYK05_RS09580 PF01817 Chorismate mutase type II JYK05_RS09585 PF00266 Aminotransferase class-V JYK05_RS09595 PF00521 DNA gyrase/topoisomerase IV, subunit A JYK05_RS09595 PF03989 DNA gyrase C-terminal domain, beta-propeller JYK05_RS09600 PF00691 OmpA family JYK05_RS09610 PF13419 Haloacid dehalogenase-like hydrolase JYK05_RS09635 PF12728 Helix-turn-helix domain JYK05_RS09635 PF12727 PBP superfamily domain JYK05_RS09645 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JYK05_RS09645 PF00037 4Fe-4S binding domain JYK05_RS09645 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JYK05_RS09650 PF01568 Molydopterin dinucleotide binding domain JYK05_RS09650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYK05_RS09650 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JYK05_RS09650 PF00384 Molybdopterin oxidoreductase JYK05_RS09650 PF00037 4Fe-4S binding domain JYK05_RS09660 PF01494 FAD binding domain JYK05_RS09665 PF01545 Cation efflux family JYK05_RS09670 PF01022 Bacterial regulatory protein, arsR family JYK05_RS09680 PF07690 Major Facilitator Superfamily JYK05_RS09700 PF07722 Peptidase C26 JYK05_RS09705 PF02254 TrkA-N domain JYK05_RS09705 PF00999 Sodium/hydrogen exchanger family JYK05_RS09710 PF00543 Nitrogen regulatory protein P-II JYK05_RS09715 PF02540 NAD synthase JYK05_RS09715 PF00795 Carbon-nitrogen hydrolase JYK05_RS09725 PF01541 GIY-YIG catalytic domain JYK05_RS09730 PF00719 Inorganic pyrophosphatase JYK05_RS09735 PF00171 Aldehyde dehydrogenase family JYK05_RS09750 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS09755 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS09760 PF00005 ABC transporter JYK05_RS09760 PF03459 TOBE domain JYK05_RS09765 PF00005 ABC transporter JYK05_RS09770 PF01774 UreD urease accessory protein JYK05_RS09775 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS09780 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS09785 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS09790 PF00005 ABC transporter JYK05_RS09795 PF00547 Urease, gamma subunit JYK05_RS09800 PF00699 Urease beta subunit JYK05_RS09805 PF00449 Urease alpha-subunit, N-terminal domain JYK05_RS09805 PF01979 Amidohydrolase family JYK05_RS09810 PF02814 UreE urease accessory protein, N-terminal domain JYK05_RS09810 PF05194 UreE urease accessory protein, C-terminal domain JYK05_RS09815 PF01730 UreF JYK05_RS09820 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYK05_RS09830 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JYK05_RS09830 PF00534 Glycosyl transferases group 1 JYK05_RS09840 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JYK05_RS09850 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JYK05_RS09850 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JYK05_RS09850 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JYK05_RS09850 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JYK05_RS09865 PF13439 Glycosyltransferase Family 4 JYK05_RS09865 PF00534 Glycosyl transferases group 1 JYK05_RS09870 PF16363 GDP-mannose 4,6 dehydratase JYK05_RS09880 PF01738 Dienelactone hydrolase family JYK05_RS09885 PF00534 Glycosyl transferases group 1 JYK05_RS09900 PF01757 Acyltransferase family JYK05_RS09910 PF00534 Glycosyl transferases group 1 JYK05_RS09910 PF13439 Glycosyltransferase Family 4 JYK05_RS09920 PF00732 GMC oxidoreductase JYK05_RS09920 PF05199 GMC oxidoreductase JYK05_RS09935 PF13579 Glycosyl transferase 4-like domain JYK05_RS09935 PF00534 Glycosyl transferases group 1 JYK05_RS09940 PF00534 Glycosyl transferases group 1 JYK05_RS09940 PF13439 Glycosyltransferase Family 4 JYK05_RS09945 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS09950 PF16363 GDP-mannose 4,6 dehydratase JYK05_RS09955 PF02706 Chain length determinant protein JYK05_RS09955 PF13807 G-rich domain on putative tyrosine kinase JYK05_RS09955 PF13614 AAA domain JYK05_RS09960 PF02563 Polysaccharide biosynthesis/export protein JYK05_RS09960 PF10531 SLBB domain JYK05_RS09965 PF02397 Bacterial sugar transferase JYK05_RS09970 PF00483 Nucleotidyl transferase JYK05_RS09970 PF01050 Mannose-6-phosphate isomerase JYK05_RS09985 PF00293 NUDIX domain JYK05_RS10005 PF03466 LysR substrate binding domain JYK05_RS10005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS10010 PF02719 Polysaccharide biosynthesis protein JYK05_RS10015 PF00953 Glycosyl transferase family 4 JYK05_RS10020 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS10045 PF00535 Glycosyl transferase family 2 JYK05_RS10055 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JYK05_RS10075 PF00535 Glycosyl transferase family 2 JYK05_RS10085 PF00398 Ribosomal RNA adenine dimethylase JYK05_RS10090 PF14307 Glycosyltransferase WbsX JYK05_RS10090 PF05045 Rhamnan synthesis protein F JYK05_RS10095 PF14307 Glycosyltransferase WbsX JYK05_RS10095 PF05045 Rhamnan synthesis protein F JYK05_RS10100 PF00005 ABC transporter JYK05_RS10105 PF01061 ABC-2 type transporter JYK05_RS10110 PF04321 RmlD substrate binding domain JYK05_RS10115 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JYK05_RS10120 PF00483 Nucleotidyl transferase JYK05_RS10125 PF16363 GDP-mannose 4,6 dehydratase JYK05_RS10130 PF00149 Calcineurin-like phosphoesterase JYK05_RS10140 PF01979 Amidohydrolase family JYK05_RS10145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JYK05_RS10145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JYK05_RS10150 PF00156 Phosphoribosyl transferase domain JYK05_RS10155 PF03652 Holliday junction resolvase JYK05_RS10160 PF02622 Uncharacterized ACR, COG1678 JYK05_RS10165 PF03441 FAD binding domain of DNA photolyase JYK05_RS10165 PF00875 DNA photolyase JYK05_RS10175 PF00301 Rubredoxin JYK05_RS10195 PF00118 TCP-1/cpn60 chaperonin family JYK05_RS10200 PF00166 Chaperonin 10 Kd subunit JYK05_RS10205 PF00534 Glycosyl transferases group 1 JYK05_RS10205 PF13439 Glycosyltransferase Family 4 JYK05_RS10250 PF03466 LysR substrate binding domain JYK05_RS10250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS10255 PF12833 Helix-turn-helix domain JYK05_RS10255 PF12852 Cupin JYK05_RS10265 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK05_RS10265 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK05_RS10270 PF01799 [2Fe-2S] binding domain JYK05_RS10270 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS10275 PF07690 Major Facilitator Superfamily JYK05_RS10280 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS10280 PF07702 UTRA domain JYK05_RS10285 PF07690 Major Facilitator Superfamily JYK05_RS10295 PF01040 UbiA prenyltransferase family JYK05_RS10320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JYK05_RS10320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JYK05_RS10325 PF13742 OB-fold nucleic acid binding domain JYK05_RS10325 PF02601 Exonuclease VII, large subunit JYK05_RS10330 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JYK05_RS10335 PF03966 Trm112p-like protein JYK05_RS10340 PF02348 Cytidylyltransferase JYK05_RS10345 PF05191 Adenylate kinase, active site lid JYK05_RS10350 PF00106 short chain dehydrogenase JYK05_RS10355 PF13369 Transglutaminase-like superfamily JYK05_RS10360 PF03023 Lipid II flippase MurJ JYK05_RS10365 PF01649 Ribosomal protein S20 JYK05_RS10375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JYK05_RS10375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JYK05_RS10380 PF01565 FAD binding domain JYK05_RS10380 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JYK05_RS10385 PF04461 Protein of unknown function (DUF520) JYK05_RS10390 PF02660 Glycerol-3-phosphate acyltransferase JYK05_RS10395 PF04073 Aminoacyl-tRNA editing domain JYK05_RS10400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS10400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS10400 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS10405 PF00589 Phage integrase family JYK05_RS10405 PF02899 Phage integrase, N-terminal SAM-like domain JYK05_RS10410 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYK05_RS10410 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYK05_RS10415 PF08331 Domain of unknown function (DUF1730) JYK05_RS10420 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JYK05_RS10425 PF11741 AMIN domain JYK05_RS10425 PF01520 N-acetylmuramoyl-L-alanine amidase JYK05_RS10430 PF00892 EamA-like transporter family JYK05_RS10440 PF02678 Pirin JYK05_RS10440 PF05726 Pirin C-terminal cupin domain JYK05_RS10445 PF00085 Thioredoxin JYK05_RS10450 PF00899 ThiF family JYK05_RS10455 PF01243 Pyridoxamine 5'-phosphate oxidase JYK05_RS10455 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JYK05_RS10470 PF01625 Peptide methionine sulfoxide reductase JYK05_RS10475 PF01613 Flavin reductase like domain JYK05_RS10480 PF01037 Lrp/AsnC ligand binding domain JYK05_RS10485 PF04199 Putative cyclase JYK05_RS10490 PF00266 Aminotransferase class-V JYK05_RS10495 PF03301 Tryptophan 2,3-dioxygenase JYK05_RS10505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS10505 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS10505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS10525 PF07963 Prokaryotic N-terminal methylation motif JYK05_RS10550 PF03477 ATP cone domain JYK05_RS10555 PF00464 Serine hydroxymethyltransferase JYK05_RS10560 PF00106 short chain dehydrogenase JYK05_RS10565 PF03061 Thioesterase superfamily JYK05_RS10570 PF01618 MotA/TolQ/ExbB proton channel family JYK05_RS10575 PF02472 Biopolymer transport protein ExbD/TolR JYK05_RS10585 PF04052 TolB amino-terminal domain JYK05_RS10585 PF07676 WD40-like Beta Propeller Repeat JYK05_RS10590 PF00691 OmpA family JYK05_RS10605 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS10605 PF08447 PAS fold JYK05_RS10605 PF00989 PAS fold JYK05_RS10605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS10605 PF13426 PAS domain JYK05_RS10605 PF13493 Domain of unknown function (DUF4118) JYK05_RS10610 PF14863 Alkyl sulfatase dimerisation JYK05_RS10610 PF14864 Alkyl sulfatase C-terminal JYK05_RS10610 PF00753 Metallo-beta-lactamase superfamily JYK05_RS10620 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS10620 PF00072 Response regulator receiver domain JYK05_RS10635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS10635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS10635 PF12806 Acetyl-CoA dehydrogenase C-terminal like JYK05_RS10635 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS10640 PF02803 Thiolase, C-terminal domain JYK05_RS10640 PF00108 Thiolase, N-terminal domain JYK05_RS10645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK05_RS10645 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS10645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK05_RS10650 PF00766 Electron transfer flavoprotein FAD-binding domain JYK05_RS10650 PF01012 Electron transfer flavoprotein domain JYK05_RS10655 PF01012 Electron transfer flavoprotein domain JYK05_RS10660 PF00106 short chain dehydrogenase JYK05_RS10665 PF13609 Gram-negative porin JYK05_RS10670 PF02515 CoA-transferase family III JYK05_RS10675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS10675 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS10675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS10680 PF00106 short chain dehydrogenase JYK05_RS10685 PF01575 MaoC like domain JYK05_RS10695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS10695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS10695 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS10700 PF00108 Thiolase, N-terminal domain JYK05_RS10700 PF02803 Thiolase, C-terminal domain JYK05_RS10710 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS10710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS10710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS10715 PF02803 Thiolase, C-terminal domain JYK05_RS10715 PF00108 Thiolase, N-terminal domain JYK05_RS10720 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS10725 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS10725 PF17874 MalT-like TPR region JYK05_RS10735 PF02146 Sir2 family JYK05_RS10745 PF00149 Calcineurin-like phosphoesterase JYK05_RS10755 PF00398 Ribosomal RNA adenine dimethylase JYK05_RS10760 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JYK05_RS10765 PF00639 PPIC-type PPIASE domain JYK05_RS10765 PF09312 SurA N-terminal domain JYK05_RS10770 PF04453 LPS transport system D JYK05_RS10775 PF01636 Phosphotransferase enzyme family JYK05_RS10780 PF00483 Nucleotidyl transferase JYK05_RS10785 PF08328 Adenylosuccinate lyase C-terminal JYK05_RS10785 PF00206 Lyase JYK05_RS10790 PF01202 Shikimate kinase JYK05_RS10795 PF02447 GntP family permease JYK05_RS10825 PF01081 KDPG and KHG aldolase JYK05_RS10830 PF00920 Dehydratase family JYK05_RS10835 PF01380 SIS domain JYK05_RS10835 PF02685 Glucokinase JYK05_RS10835 PF01418 Helix-turn-helix domain, rpiR family JYK05_RS10840 PF03653 Uncharacterised protein family (UPF0093) JYK05_RS10845 PF00171 Aldehyde dehydrogenase family JYK05_RS10850 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JYK05_RS10850 PF06144 DNA polymerase III, delta subunit JYK05_RS10855 PF04390 Lipopolysaccharide-assembly JYK05_RS10860 PF13603 Leucyl-tRNA synthetase, Domain 2 JYK05_RS10860 PF00133 tRNA synthetases class I (I, L, M and V) JYK05_RS10860 PF08264 Anticodon-binding domain of tRNA JYK05_RS10860 PF09334 tRNA synthetases class I (M) JYK05_RS10865 PF02472 Biopolymer transport protein ExbD/TolR JYK05_RS10870 PF01618 MotA/TolQ/ExbB proton channel family JYK05_RS10875 PF01113 Dihydrodipicolinate reductase, N-terminus JYK05_RS10875 PF05173 Dihydrodipicolinate reductase, C-terminus JYK05_RS10880 PF04355 SmpA / OmlA family JYK05_RS10885 PF01475 Ferric uptake regulator family JYK05_RS10895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JYK05_RS10895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JYK05_RS10900 PF02780 Transketolase, C-terminal domain JYK05_RS10900 PF00456 Transketolase, thiamine diphosphate binding domain JYK05_RS10900 PF02779 Transketolase, pyrimidine binding domain JYK05_RS10910 PF04452 RNA methyltransferase JYK05_RS10920 PF00545 ribonuclease JYK05_RS10925 PF00390 Malic enzyme, N-terminal domain JYK05_RS10925 PF03949 Malic enzyme, NAD binding domain JYK05_RS10925 PF01515 Phosphate acetyl/butaryl transferase JYK05_RS10930 PF00586 AIR synthase related protein, N-terminal domain JYK05_RS10930 PF02769 AIR synthase related protein, C-terminal domain JYK05_RS10935 PF04608 Phosphatidylglycerophosphatase A JYK05_RS10940 PF02464 Competence-damaged protein JYK05_RS10945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JYK05_RS10955 PF08450 SMP-30/Gluconolactonase/LRE-like region JYK05_RS10965 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS10970 PF00005 ABC transporter JYK05_RS10975 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JYK05_RS10985 PF01081 KDPG and KHG aldolase JYK05_RS10990 PF05035 2-keto-3-deoxy-galactonokinase JYK05_RS10995 PF01614 Bacterial transcriptional regulator JYK05_RS10995 PF09339 IclR helix-turn-helix domain JYK05_RS11000 PF00912 Transglycosylase JYK05_RS11005 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYK05_RS11005 PF01488 Shikimate / quinate 5-dehydrogenase JYK05_RS11005 PF08501 Shikimate dehydrogenase substrate binding domain JYK05_RS11010 PF00773 RNB domain JYK05_RS11015 PF05728 Uncharacterised protein family (UPF0227) JYK05_RS11020 PF01225 Mur ligase family, catalytic domain JYK05_RS11020 PF08245 Mur ligase middle domain JYK05_RS11020 PF02875 Mur ligase family, glutamate ligase domain JYK05_RS11030 PF08534 Redoxin JYK05_RS11035 PF00364 Biotin-requiring enzyme JYK05_RS11040 PF00289 Biotin carboxylase, N-terminal domain JYK05_RS11040 PF02785 Biotin carboxylase C-terminal domain JYK05_RS11040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYK05_RS11055 PF08534 Redoxin JYK05_RS11060 PF00294 pfkB family carbohydrate kinase JYK05_RS11075 PF00268 Ribonucleotide reductase, small chain JYK05_RS11085 PF07690 Major Facilitator Superfamily JYK05_RS11090 PF00317 Ribonucleotide reductase, all-alpha domain JYK05_RS11090 PF02867 Ribonucleotide reductase, barrel domain JYK05_RS11090 PF03477 ATP cone domain JYK05_RS11100 PF01578 Cytochrome C assembly protein JYK05_RS11105 PF02978 Signal peptide binding domain JYK05_RS11105 PF00448 SRP54-type protein, GTPase domain JYK05_RS11105 PF02881 SRP54-type protein, helical bundle domain JYK05_RS11110 PF00156 Phosphoribosyl transferase domain JYK05_RS11115 PF01914 MarC family integral membrane protein JYK05_RS11120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JYK05_RS11120 PF03129 Anticodon binding domain JYK05_RS11120 PF04073 Aminoacyl-tRNA editing domain JYK05_RS11125 PF00293 NUDIX domain JYK05_RS11135 PF01472 PUA domain JYK05_RS11135 PF00696 Amino acid kinase family JYK05_RS11140 PF01018 GTP1/OBG JYK05_RS11140 PF01926 50S ribosome-binding GTPase JYK05_RS11145 PF01016 Ribosomal L27 protein JYK05_RS11150 PF00829 Ribosomal prokaryotic L21 protein JYK05_RS11155 PF00348 Polyprenyl synthetase JYK05_RS11165 PF00571 CBS domain JYK05_RS11165 PF01595 Cyclin M transmembrane N-terminal domain JYK05_RS11165 PF03471 Transporter associated domain JYK05_RS11170 PF00437 Type II/IV secretion system protein JYK05_RS11170 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JYK05_RS11175 PF00482 Type II secretion system (T2SS), protein F JYK05_RS11180 PF01478 Type IV leader peptidase family JYK05_RS11180 PF06750 Bacterial Peptidase A24 N-terminal domain JYK05_RS11185 PF01121 Dephospho-CoA kinase JYK05_RS11190 PF07072 Cell division protein JYK05_RS11195 PF03884 DNA gyrase inhibitor YacG JYK05_RS11200 PF00293 NUDIX domain JYK05_RS11210 PF01960 ArgJ family JYK05_RS11215 PF07517 SecA DEAD-like domain JYK05_RS11215 PF01043 SecA preprotein cross-linking domain JYK05_RS11215 PF02810 SEC-C motif JYK05_RS11215 PF07516 SecA Wing and Scaffold domain JYK05_RS11225 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JYK05_RS11230 PF08534 Redoxin JYK05_RS11235 PF00091 Tubulin/FtsZ family, GTPase domain JYK05_RS11235 PF12327 FtsZ family, C-terminal domain JYK05_RS11240 PF02491 SHS2 domain inserted in FTSA JYK05_RS11245 PF03799 Cell division protein FtsQ JYK05_RS11245 PF08478 POTRA domain, FtsQ-type JYK05_RS11250 PF01820 D-ala D-ala ligase N-terminus JYK05_RS11250 PF07478 D-ala D-ala ligase C-terminus JYK05_RS11255 PF02875 Mur ligase family, glutamate ligase domain JYK05_RS11255 PF01225 Mur ligase family, catalytic domain JYK05_RS11255 PF08245 Mur ligase middle domain JYK05_RS11260 PF04101 Glycosyltransferase family 28 C-terminal domain JYK05_RS11260 PF03033 Glycosyltransferase family 28 N-terminal domain JYK05_RS11265 PF01098 Cell cycle protein JYK05_RS11270 PF08245 Mur ligase middle domain JYK05_RS11270 PF02875 Mur ligase family, glutamate ligase domain JYK05_RS11275 PF00953 Glycosyl transferase family 4 JYK05_RS11275 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JYK05_RS11280 PF01225 Mur ligase family, catalytic domain JYK05_RS11280 PF08245 Mur ligase middle domain JYK05_RS11280 PF02875 Mur ligase family, glutamate ligase domain JYK05_RS11285 PF08245 Mur ligase middle domain JYK05_RS11285 PF02875 Mur ligase family, glutamate ligase domain JYK05_RS11290 PF03717 Penicillin-binding Protein dimerisation domain JYK05_RS11290 PF00905 Penicillin binding protein transpeptidase domain JYK05_RS11295 PF04999 Cell division protein FtsL JYK05_RS11300 PF01795 MraW methylase family JYK05_RS11305 PF02381 MraZ protein, putative antitoxin-like JYK05_RS11310 PF03232 Ubiquinone biosynthesis protein COQ7 JYK05_RS11315 PF13609 Gram-negative porin JYK05_RS11320 PF13193 AMP-binding enzyme C-terminal domain JYK05_RS11320 PF00501 AMP-binding enzyme JYK05_RS11325 PF01568 Molydopterin dinucleotide binding domain JYK05_RS11325 PF00384 Molybdopterin oxidoreductase JYK05_RS11325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYK05_RS11330 PF01546 Peptidase family M20/M25/M40 JYK05_RS11330 PF07687 Peptidase dimerisation domain JYK05_RS11360 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS11370 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS11375 PF03061 Thioesterase superfamily JYK05_RS11380 PF00501 AMP-binding enzyme JYK05_RS11380 PF14535 AMP-binding enzyme C-terminal domain JYK05_RS11385 PF03562 MltA specific insert domain JYK05_RS11385 PF06725 3D domain JYK05_RS11390 PF04379 ApaG domain JYK05_RS11395 PF00834 Ribulose-phosphate 3 epimerase family JYK05_RS11400 PF13419 Haloacid dehalogenase-like hydrolase JYK05_RS11405 PF00425 chorismate binding enzyme JYK05_RS11405 PF04715 Anthranilate synthase component I, N terminal region JYK05_RS11410 PF00117 Glutamine amidotransferase class-I JYK05_RS11415 PF00591 Glycosyl transferase family, a/b domain JYK05_RS11415 PF02885 Glycosyl transferase family, helical bundle domain JYK05_RS11420 PF00218 Indole-3-glycerol phosphate synthase JYK05_RS11425 PF01928 CYTH domain JYK05_RS11430 PF03167 Uracil DNA glycosylase superfamily JYK05_RS11435 PF02525 Flavodoxin-like fold JYK05_RS11445 PF10411 Disulfide bond isomerase protein N-terminus JYK05_RS11445 PF13098 Thioredoxin-like domain JYK05_RS11450 PF01494 FAD binding domain JYK05_RS11455 PF06071 Protein of unknown function (DUF933) JYK05_RS11455 PF01926 50S ribosome-binding GTPase JYK05_RS11465 PF12848 ABC transporter JYK05_RS11465 PF00005 ABC transporter JYK05_RS11480 PF00557 Metallopeptidase family M24 JYK05_RS11480 PF01321 Creatinase/Prolidase N-terminal domain JYK05_RS11495 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JYK05_RS11495 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JYK05_RS11495 PF01488 Shikimate / quinate 5-dehydrogenase JYK05_RS11500 PF00472 RF-1 domain JYK05_RS11500 PF03462 PCRF domain JYK05_RS11505 PF05175 Methyltransferase small domain JYK05_RS11505 PF17827 PrmC N-terminal domain JYK05_RS11510 PF00462 Glutaredoxin JYK05_RS11515 PF02441 Flavoprotein JYK05_RS11520 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JYK05_RS11525 PF13520 Amino acid permease JYK05_RS11530 PF00313 'Cold-shock' DNA-binding domain JYK05_RS11535 PF00012 Hsp70 protein JYK05_RS11540 PF07690 Major Facilitator Superfamily JYK05_RS11545 PF00881 Nitroreductase family JYK05_RS11575 PF07729 FCD domain JYK05_RS11575 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS11580 PF01232 Mannitol dehydrogenase Rossmann domain JYK05_RS11580 PF08125 Mannitol dehydrogenase C-terminal domain JYK05_RS11585 PF07690 Major Facilitator Superfamily JYK05_RS11590 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JYK05_RS11590 PF08666 SAF domain JYK05_RS11630 PF04386 Stringent starvation protein B JYK05_RS11635 PF00043 Glutathione S-transferase, C-terminal domain JYK05_RS11635 PF02798 Glutathione S-transferase, N-terminal domain JYK05_RS11640 PF02167 Cytochrome C1 family JYK05_RS11645 PF00032 Cytochrome b(C-terminal)/b6/petD JYK05_RS11645 PF00033 Cytochrome b/b6/petB JYK05_RS11650 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JYK05_RS11650 PF00355 Rieske [2Fe-2S] domain JYK05_RS11655 PF01784 NIF3 (NGG1p interacting factor 3) JYK05_RS11660 PF17820 PDZ domain JYK05_RS11660 PF13180 PDZ domain JYK05_RS11665 PF00902 Sec-independent protein translocase protein (TatC) JYK05_RS11670 PF02416 mttA/Hcf106 family JYK05_RS11675 PF02416 mttA/Hcf106 family JYK05_RS11690 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JYK05_RS11695 PF01502 Phosphoribosyl-AMP cyclohydrolase JYK05_RS11700 PF00977 Histidine biosynthesis protein JYK05_RS11705 PF00977 Histidine biosynthesis protein JYK05_RS11710 PF00117 Glutamine amidotransferase class-I JYK05_RS11715 PF01914 MarC family integral membrane protein JYK05_RS11720 PF00475 Imidazoleglycerol-phosphate dehydratase JYK05_RS11725 PF00155 Aminotransferase class I and II JYK05_RS11730 PF00815 Histidinol dehydrogenase JYK05_RS11735 PF01634 ATP phosphoribosyltransferase JYK05_RS11740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JYK05_RS11745 PF01722 BolA-like protein JYK05_RS11750 PF01061 ABC-2 type transporter JYK05_RS11755 PF00005 ABC transporter JYK05_RS11775 PF02470 MlaD protein JYK05_RS11780 PF02405 Permease MlaE JYK05_RS11785 PF00005 ABC transporter JYK05_RS11790 PF02581 Thiamine monophosphate synthase JYK05_RS11795 PF05690 Thiazole biosynthesis protein ThiG JYK05_RS11805 PF01266 FAD dependent oxidoreductase JYK05_RS11810 PF00005 ABC transporter JYK05_RS11810 PF06472 ABC transporter transmembrane region 2 JYK05_RS11815 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS11815 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JYK05_RS11820 PF00310 Glutamine amidotransferases class-II JYK05_RS11820 PF04898 Glutamate synthase central domain JYK05_RS11820 PF01493 GXGXG motif JYK05_RS11820 PF01645 Conserved region in glutamate synthase JYK05_RS11840 PF03009 Glycerophosphoryl diester phosphodiesterase family JYK05_RS11850 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS11855 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS11860 PF13416 Bacterial extracellular solute-binding protein JYK05_RS11865 PF13286 Phosphohydrolase-associated domain JYK05_RS11865 PF01966 HD domain JYK05_RS11870 PF01761 3-dehydroquinate synthase JYK05_RS11875 PF01202 Shikimate kinase JYK05_RS11880 PF03958 Bacterial type II/III secretion system short domain JYK05_RS11880 PF00263 Bacterial type II and III secretion system protein JYK05_RS11880 PF11741 AMIN domain JYK05_RS11880 PF07660 Secretin and TonB N terminus short domain JYK05_RS11900 PF00905 Penicillin binding protein transpeptidase domain JYK05_RS11900 PF17092 Penicillin-binding protein OB-like domain JYK05_RS11900 PF00912 Transglycosylase JYK05_RS11905 PF01491 Frataxin-like domain JYK05_RS11915 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JYK05_RS11915 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JYK05_RS11920 PF01794 Ferric reductase like transmembrane component JYK05_RS11925 PF00174 Oxidoreductase molybdopterin binding domain JYK05_RS11930 PF01578 Cytochrome C assembly protein JYK05_RS11935 PF05140 ResB-like family JYK05_RS11940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS11945 PF01926 50S ribosome-binding GTPase JYK05_RS11950 PF00490 Delta-aminolevulinic acid dehydratase JYK05_RS11955 PF02683 Cytochrome C biogenesis protein transmembrane region JYK05_RS11955 PF11412 Disulphide bond corrector protein DsbC JYK05_RS11965 PF01196 Ribosomal protein L17 JYK05_RS11970 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JYK05_RS11970 PF01000 RNA polymerase Rpb3/RpoA insert domain JYK05_RS11970 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JYK05_RS11975 PF01479 S4 domain JYK05_RS11975 PF00163 Ribosomal protein S4/S9 N-terminal domain JYK05_RS11980 PF00411 Ribosomal protein S11 JYK05_RS11985 PF00416 Ribosomal protein S13/S18 JYK05_RS11990 PF00444 Ribosomal protein L36 JYK05_RS11995 PF01176 Translation initiation factor 1A / IF-1 JYK05_RS12000 PF00344 SecY translocase JYK05_RS12005 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JYK05_RS12010 PF00327 Ribosomal protein L30p/L7e JYK05_RS12015 PF00333 Ribosomal protein S5, N-terminal domain JYK05_RS12015 PF03719 Ribosomal protein S5, C-terminal domain JYK05_RS12020 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JYK05_RS12025 PF00347 Ribosomal protein L6 JYK05_RS12030 PF00410 Ribosomal protein S8 JYK05_RS12035 PF00253 Ribosomal protein S14p/S29e JYK05_RS12040 PF00673 ribosomal L5P family C-terminus JYK05_RS12040 PF00281 Ribosomal protein L5 JYK05_RS12045 PF00467 KOW motif JYK05_RS12045 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JYK05_RS12050 PF00238 Ribosomal protein L14p/L23e JYK05_RS12055 PF00366 Ribosomal protein S17 JYK05_RS12060 PF00831 Ribosomal L29 protein JYK05_RS12065 PF00252 Ribosomal protein L16p/L10e JYK05_RS12070 PF00189 Ribosomal protein S3, C-terminal domain JYK05_RS12070 PF07650 KH domain JYK05_RS12075 PF00237 Ribosomal protein L22p/L17e JYK05_RS12080 PF00203 Ribosomal protein S19 JYK05_RS12085 PF00181 Ribosomal Proteins L2, RNA binding domain JYK05_RS12085 PF03947 Ribosomal Proteins L2, C-terminal domain JYK05_RS12090 PF00276 Ribosomal protein L23 JYK05_RS12095 PF00573 Ribosomal protein L4/L1 family JYK05_RS12100 PF00297 Ribosomal protein L3 JYK05_RS12105 PF00338 Ribosomal protein S10p/S20e JYK05_RS12110 PF03143 Elongation factor Tu C-terminal domain JYK05_RS12110 PF00009 Elongation factor Tu GTP binding domain JYK05_RS12110 PF03144 Elongation factor Tu domain 2 JYK05_RS12115 PF03764 Elongation factor G, domain IV JYK05_RS12115 PF14492 Elongation Factor G, domain II JYK05_RS12115 PF00009 Elongation factor Tu GTP binding domain JYK05_RS12115 PF03144 Elongation factor Tu domain 2 JYK05_RS12115 PF00679 Elongation factor G C-terminus JYK05_RS12120 PF00177 Ribosomal protein S7p/S5e JYK05_RS12125 PF00164 Ribosomal protein S12/S23 JYK05_RS12130 PF00270 DEAD/DEAH box helicase JYK05_RS12130 PF00271 Helicase conserved C-terminal domain JYK05_RS12130 PF00570 HRDC domain JYK05_RS12130 PF16124 RecQ zinc-binding JYK05_RS12130 PF09382 RQC domain JYK05_RS12135 PF04998 RNA polymerase Rpb1, domain 5 JYK05_RS12135 PF05000 RNA polymerase Rpb1, domain 4 JYK05_RS12135 PF04997 RNA polymerase Rpb1, domain 1 JYK05_RS12135 PF04983 RNA polymerase Rpb1, domain 3 JYK05_RS12135 PF00623 RNA polymerase Rpb1, domain 2 JYK05_RS12140 PF04561 RNA polymerase Rpb2, domain 2 JYK05_RS12140 PF04563 RNA polymerase beta subunit JYK05_RS12140 PF00562 RNA polymerase Rpb2, domain 6 JYK05_RS12140 PF04565 RNA polymerase Rpb2, domain 3 JYK05_RS12140 PF04560 RNA polymerase Rpb2, domain 7 JYK05_RS12140 PF10385 RNA polymerase beta subunit external 1 domain JYK05_RS12145 PF16320 Ribosomal protein L7/L12 dimerisation domain JYK05_RS12145 PF00542 Ribosomal protein L7/L12 C-terminal domain JYK05_RS12150 PF00466 Ribosomal protein L10 JYK05_RS12155 PF00687 Ribosomal protein L1p/L10e family JYK05_RS12160 PF03946 Ribosomal protein L11, N-terminal domain JYK05_RS12160 PF00298 Ribosomal protein L11, RNA binding domain JYK05_RS12165 PF02357 Transcription termination factor nusG JYK05_RS12165 PF00467 KOW motif JYK05_RS12170 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JYK05_RS12180 PF03144 Elongation factor Tu domain 2 JYK05_RS12180 PF00009 Elongation factor Tu GTP binding domain JYK05_RS12180 PF03143 Elongation factor Tu C-terminal domain JYK05_RS12230 PF05175 Methyltransferase small domain JYK05_RS12240 PF00083 Sugar (and other) transporter JYK05_RS12245 PF05138 Phenylacetic acid catabolic protein JYK05_RS12250 PF06243 Phenylacetic acid degradation B JYK05_RS12255 PF05138 Phenylacetic acid catabolic protein JYK05_RS12260 PF01883 Iron-sulfur cluster assembly protein JYK05_RS12265 PF00175 Oxidoreductase NAD-binding domain JYK05_RS12265 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS12265 PF00970 Oxidoreductase FAD-binding domain JYK05_RS12275 PF17932 Tetracyclin repressor-like, C-terminal domain JYK05_RS12275 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS12285 PF01037 Lrp/AsnC ligand binding domain JYK05_RS12285 PF13404 AsnC-type helix-turn-helix domain JYK05_RS12290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK05_RS12310 PF01515 Phosphate acetyl/butaryl transferase JYK05_RS12310 PF03949 Malic enzyme, NAD binding domain JYK05_RS12310 PF00390 Malic enzyme, N-terminal domain JYK05_RS12315 PF07690 Major Facilitator Superfamily JYK05_RS12320 PF00156 Phosphoribosyl transferase domain JYK05_RS12325 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS12325 PF00072 Response regulator receiver domain JYK05_RS12330 PF01161 Phosphatidylethanolamine-binding protein JYK05_RS12335 PF03358 NADPH-dependent FMN reductase JYK05_RS12340 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYK05_RS12345 PF00072 Response regulator receiver domain JYK05_RS12345 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS12355 PF01810 LysE type translocator JYK05_RS12360 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYK05_RS12360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK05_RS12380 PF07690 Major Facilitator Superfamily JYK05_RS12385 PF01355 High potential iron-sulfur protein JYK05_RS12390 PF01266 FAD dependent oxidoreductase JYK05_RS12395 PF02190 ATP-dependent protease La (LON) substrate-binding domain JYK05_RS12395 PF05362 Lon protease (S16) C-terminal proteolytic domain JYK05_RS12395 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS12405 PF03372 Endonuclease/Exonuclease/phosphatase family JYK05_RS12410 PF00072 Response regulator receiver domain JYK05_RS12410 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS12420 PF01042 Endoribonuclease L-PSP JYK05_RS12430 PF03960 ArsC family JYK05_RS12455 PF01820 D-ala D-ala ligase N-terminus JYK05_RS12455 PF07478 D-ala D-ala ligase C-terminus JYK05_RS12460 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JYK05_RS12465 PF06368 Methylaspartate mutase E chain (MutE) JYK05_RS12470 PF13840 ACT domain JYK05_RS12470 PF01842 ACT domain JYK05_RS12470 PF00696 Amino acid kinase family JYK05_RS12475 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYK05_RS12475 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYK05_RS12485 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS12490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS12490 PF03466 LysR substrate binding domain JYK05_RS12495 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYK05_RS12495 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK05_RS12500 PF03328 HpcH/HpaI aldolase/citrate lyase family JYK05_RS12505 PF01380 SIS domain JYK05_RS12510 PF12804 MobA-like NTP transferase domain JYK05_RS12510 PF00132 Bacterial transferase hexapeptide (six repeats) JYK05_RS12515 PF01171 PP-loop family JYK05_RS12540 PF01743 Poly A polymerase head domain JYK05_RS12540 PF12627 Probable RNA and SrmB- binding site of polymerase A JYK05_RS12540 PF01966 HD domain JYK05_RS12555 PF01464 Transglycosylase SLT domain JYK05_RS12555 PF14718 Soluble lytic murein transglycosylase L domain JYK05_RS12560 PF01812 5-formyltetrahydrofolate cyclo-ligase family JYK05_RS12570 PF02682 Carboxyltransferase domain, subdomain C and D JYK05_RS12575 PF02626 Carboxyltransferase domain, subdomain A and B JYK05_RS12580 PF03746 LamB/YcsF family JYK05_RS12600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK05_RS12600 PF00005 ABC transporter JYK05_RS12605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK05_RS12605 PF00005 ABC transporter JYK05_RS12610 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS12610 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK05_RS12615 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS12620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK05_RS12625 PF00535 Glycosyl transferase family 2 JYK05_RS12630 PF02219 Methylenetetrahydrofolate reductase JYK05_RS12635 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JYK05_RS12640 PF05221 S-adenosyl-L-homocysteine hydrolase JYK05_RS12640 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JYK05_RS12645 PF04172 LrgB-like family JYK05_RS12650 PF03788 LrgA family JYK05_RS12655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS12655 PF03466 LysR substrate binding domain JYK05_RS12665 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS12665 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS12665 PF18158 Adaptive response protein AidB N-terminal domain JYK05_RS12685 PF03412 Peptidase C39 family JYK05_RS12685 PF00005 ABC transporter JYK05_RS12685 PF00664 ABC transporter transmembrane region JYK05_RS12695 PF02321 Outer membrane efflux protein JYK05_RS12700 PF01312 FlhB HrpN YscU SpaS Family JYK05_RS12715 PF02561 Flagellar protein FliS JYK05_RS12720 PF02049 Flagellar hook-basal body complex protein FliE JYK05_RS12725 PF01514 Secretory protein of YscJ/FliF family JYK05_RS12725 PF08345 Flagellar M-ring protein C-terminal JYK05_RS12730 PF14842 FliG N-terminal domain JYK05_RS12730 PF14841 FliG middle domain JYK05_RS12730 PF01706 FliG C-terminal domain JYK05_RS12740 PF18269 T3SS EscN ATPase C-terminal domain JYK05_RS12740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYK05_RS12755 PF03748 Flagellar basal body-associated protein FliL JYK05_RS12760 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JYK05_RS12760 PF02154 Flagellar motor switch protein FliM JYK05_RS12765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JYK05_RS12765 PF16973 Flagellar motor switch protein FliN N-terminal JYK05_RS12770 PF04347 Flagellar biosynthesis protein, FliO JYK05_RS12775 PF00813 FliP family JYK05_RS12780 PF01313 Bacterial export proteins, family 3 JYK05_RS12785 PF01311 Bacterial export proteins, family 1 JYK05_RS12790 PF00669 Bacterial flagellin N-terminal helical region JYK05_RS12795 PF00460 Flagella basal body rod protein JYK05_RS12795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JYK05_RS12800 PF07317 Flagellar regulator YcgR JYK05_RS12800 PF07238 PilZ domain JYK05_RS12805 PF10135 Rod binding protein JYK05_RS12805 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JYK05_RS12810 PF02119 Flagellar P-ring protein JYK05_RS12815 PF02107 Flagellar L-ring protein JYK05_RS12820 PF00460 Flagella basal body rod protein JYK05_RS12820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JYK05_RS12825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JYK05_RS12825 PF00460 Flagella basal body rod protein JYK05_RS12830 PF00460 Flagella basal body rod protein JYK05_RS12830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JYK05_RS12830 PF07559 Flagellar basal body protein FlaE JYK05_RS12840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JYK05_RS12840 PF00460 Flagella basal body rod protein JYK05_RS12845 PF00460 Flagella basal body rod protein JYK05_RS12860 PF04316 Anti-sigma-28 factor, FlgM JYK05_RS12870 PF01312 FlhB HrpN YscU SpaS Family JYK05_RS12875 PF00771 FHIPEP family JYK05_RS12890 PF03313 Serine dehydratase alpha chain JYK05_RS12890 PF03315 Serine dehydratase beta chain JYK05_RS12900 PF02347 Glycine cleavage system P-protein JYK05_RS12905 PF01597 Glycine cleavage H-protein JYK05_RS12910 PF08669 Glycine cleavage T-protein C-terminal barrel domain JYK05_RS12910 PF01571 Aminomethyltransferase folate-binding domain JYK05_RS12920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK05_RS12920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK05_RS12925 PF13361 UvrD-like helicase C-terminal domain JYK05_RS12925 PF00580 UvrD/REP helicase N-terminal domain JYK05_RS12930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS12965 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK05_RS12965 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK05_RS12990 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JYK05_RS12990 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JYK05_RS12995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JYK05_RS13000 PF00535 Glycosyl transferase family 2 JYK05_RS13010 PF00563 EAL domain JYK05_RS13010 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS13010 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS13015 PF04545 Sigma-70, region 4 JYK05_RS13015 PF04539 Sigma-70 region 3 JYK05_RS13015 PF04542 Sigma-70 region 2 JYK05_RS13025 PF00448 SRP54-type protein, GTPase domain JYK05_RS13030 PF00205 Thiamine pyrophosphate enzyme, central domain JYK05_RS13030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK05_RS13030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK05_RS13035 PF13458 Periplasmic binding protein JYK05_RS13040 PF01619 Proline dehydrogenase JYK05_RS13040 PF00171 Aldehyde dehydrogenase family JYK05_RS13040 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JYK05_RS13040 PF14850 DNA-binding domain of Proline dehydrogenase JYK05_RS13050 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JYK05_RS13050 PF18074 Primosomal protein N C-terminal domain JYK05_RS13050 PF17764 3′ DNA-binding domain (3′BD) JYK05_RS13050 PF00271 Helicase conserved C-terminal domain JYK05_RS13050 PF00270 DEAD/DEAH box helicase JYK05_RS13055 PF01208 Uroporphyrinogen decarboxylase (URO-D) JYK05_RS13060 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS13065 PF07859 alpha/beta hydrolase fold JYK05_RS13070 PF13193 AMP-binding enzyme C-terminal domain JYK05_RS13070 PF00501 AMP-binding enzyme JYK05_RS13075 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JYK05_RS13075 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JYK05_RS13080 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYK05_RS13080 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYK05_RS13085 PF00231 ATP synthase JYK05_RS13090 PF00306 ATP synthase alpha/beta chain, C terminal domain JYK05_RS13090 PF02874 ATP synthase alpha/beta family, beta-barrel domain JYK05_RS13090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JYK05_RS13095 PF00213 ATP synthase delta (OSCP) subunit JYK05_RS13100 PF00430 ATP synthase B/B' CF(0) JYK05_RS13105 PF00137 ATP synthase subunit C JYK05_RS13110 PF00119 ATP synthase A chain JYK05_RS13120 PF03600 Citrate transporter JYK05_RS13125 PF02195 ParB-like nuclease domain JYK05_RS13125 PF17762 HTH domain found in ParB protein JYK05_RS13130 PF13614 AAA domain JYK05_RS13135 PF02527 rRNA small subunit methyltransferase G JYK05_RS13140 PF01134 Glucose inhibited division protein A JYK05_RS13140 PF13932 GidA associated domain JYK05_RS13145 PF00005 ABC transporter JYK05_RS13150 PF00005 ABC transporter JYK05_RS13150 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYK05_RS13175 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS13185 PF00005 ABC transporter JYK05_RS13190 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYK05_RS13190 PF00005 ABC transporter JYK05_RS13195 PF00732 GMC oxidoreductase JYK05_RS13195 PF05199 GMC oxidoreductase JYK05_RS13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS13200 PF03466 LysR substrate binding domain JYK05_RS13210 PF01037 Lrp/AsnC ligand binding domain JYK05_RS13215 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS13215 PF00072 Response regulator receiver domain JYK05_RS13220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS13220 PF08521 Two-component sensor kinase N-terminal JYK05_RS13220 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS13230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYK05_RS13235 PF00117 Glutamine amidotransferase class-I JYK05_RS13235 PF00958 GMP synthase C terminal domain JYK05_RS13235 PF02540 NAD synthase JYK05_RS13245 PF04107 Glutamate-cysteine ligase family 2(GCS2) JYK05_RS13255 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JYK05_RS13255 PF01266 FAD dependent oxidoreductase JYK05_RS13260 PF00216 Bacterial DNA-binding protein JYK05_RS13265 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYK05_RS13265 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYK05_RS13270 PF01464 Transglycosylase SLT domain JYK05_RS13280 PF00437 Type II/IV secretion system protein JYK05_RS13285 PF00482 Type II secretion system (T2SS), protein F JYK05_RS13295 PF07963 Prokaryotic N-terminal methylation motif JYK05_RS13295 PF08334 Type II secretion system (T2SS), protein G JYK05_RS13305 PF02501 Type II secretion system (T2SS), protein I JYK05_RS13305 PF07963 Prokaryotic N-terminal methylation motif JYK05_RS13310 PF07963 Prokaryotic N-terminal methylation motif JYK05_RS13310 PF11612 Type II secretion system (T2SS), protein J JYK05_RS13335 PF02321 Outer membrane efflux protein JYK05_RS13345 PF01047 MarR family JYK05_RS13350 PF07690 Major Facilitator Superfamily JYK05_RS13360 PF04262 Glutamate-cysteine ligase JYK05_RS13365 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYK05_RS13365 PF12833 Helix-turn-helix domain JYK05_RS13365 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYK05_RS13365 PF02805 Metal binding domain of Ada JYK05_RS13370 PF07724 AAA domain (Cdc48 subfamily) JYK05_RS13370 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS13375 PF00227 Proteasome subunit JYK05_RS13380 PF01258 Prokaryotic dksA/traR C4-type zinc finger JYK05_RS13385 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYK05_RS13385 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYK05_RS13390 PF10672 S-adenosylmethionine-dependent methyltransferase JYK05_RS13390 PF17785 PUA-like domain JYK05_RS13395 PF02899 Phage integrase, N-terminal SAM-like domain JYK05_RS13395 PF00589 Phage integrase family JYK05_RS13405 PF01678 Diaminopimelate epimerase JYK05_RS13410 PF03279 Bacterial lipid A biosynthesis acyltransferase JYK05_RS13415 PF02772 S-adenosylmethionine synthetase, central domain JYK05_RS13415 PF02773 S-adenosylmethionine synthetase, C-terminal domain JYK05_RS13415 PF00438 S-adenosylmethionine synthetase, N-terminal domain JYK05_RS13435 PF00924 Mechanosensitive ion channel JYK05_RS13435 PF05552 Conserved TM helix JYK05_RS13440 PF00248 Aldo/keto reductase family JYK05_RS13445 PF00175 Oxidoreductase NAD-binding domain JYK05_RS13445 PF00970 Oxidoreductase FAD-binding domain JYK05_RS13450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS13450 PF07730 Histidine kinase JYK05_RS13450 PF05231 MASE1 JYK05_RS13455 PF00072 Response regulator receiver domain JYK05_RS13455 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS13460 PF13520 Amino acid permease JYK05_RS13465 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS13465 PF01799 [2Fe-2S] binding domain JYK05_RS13470 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK05_RS13470 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK05_RS13475 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK05_RS13475 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK05_RS13495 PF02625 XdhC and CoxI family JYK05_RS13495 PF13478 XdhC Rossmann domain JYK05_RS13505 PF01636 Phosphotransferase enzyme family JYK05_RS13515 PF07690 Major Facilitator Superfamily JYK05_RS13525 PF01738 Dienelactone hydrolase family JYK05_RS13530 PF13458 Periplasmic binding protein JYK05_RS13535 PF07690 Major Facilitator Superfamily JYK05_RS13545 PF00816 H-NS histone family JYK05_RS13550 PF01545 Cation efflux family JYK05_RS13550 PF16916 Dimerisation domain of Zinc Transporter JYK05_RS13555 PF01037 Lrp/AsnC ligand binding domain JYK05_RS13565 PF00753 Metallo-beta-lactamase superfamily JYK05_RS13570 PF03330 Lytic transglycolase JYK05_RS13570 PF05036 Sporulation related domain JYK05_RS13575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK05_RS13580 PF02021 Uncharacterised protein family UPF0102 JYK05_RS13585 PF13580 SIS domain JYK05_RS13595 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS13615 PF02384 N-6 DNA Methylase JYK05_RS13615 PF12161 HsdM N-terminal domain JYK05_RS13630 PF18766 SWI2/SNF2 ATPase JYK05_RS13630 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JYK05_RS13630 PF12008 Type I restriction and modification enzyme - subunit R C terminal JYK05_RS13645 PF07152 YaeQ protein JYK05_RS13655 PF01810 LysE type translocator JYK05_RS13665 PF12631 MnmE helical domain JYK05_RS13665 PF10396 GTP-binding protein TrmE N-terminus JYK05_RS13665 PF01926 50S ribosome-binding GTPase JYK05_RS13680 PF14849 YidC periplasmic domain JYK05_RS13680 PF02096 60Kd inner membrane protein JYK05_RS13685 PF01809 Putative membrane protein insertion efficiency factor JYK05_RS13690 PF00825 Ribonuclease P JYK05_RS13695 PF00468 Ribosomal protein L34 JYK05_RS13710 PF13614 AAA domain JYK05_RS13715 PF13607 Succinyl-CoA ligase like flavodoxin domain JYK05_RS13715 PF00583 Acetyltransferase (GNAT) family JYK05_RS13715 PF13380 CoA binding domain JYK05_RS13730 PF00248 Aldo/keto reductase family JYK05_RS13745 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYK05_RS13755 PF00672 HAMP domain JYK05_RS13755 PF02203 Tar ligand binding domain homologue JYK05_RS13755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS13765 PF02308 MgtC family JYK05_RS13780 PF01613 Flavin reductase like domain JYK05_RS13785 PF00005 ABC transporter JYK05_RS13785 PF00571 CBS domain JYK05_RS13790 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS13795 PF01965 DJ-1/PfpI family JYK05_RS13795 PF12833 Helix-turn-helix domain JYK05_RS13800 PF00596 Class II Aldolase and Adducin N-terminal domain JYK05_RS13805 PF01965 DJ-1/PfpI family JYK05_RS13805 PF12833 Helix-turn-helix domain JYK05_RS13815 PF03315 Serine dehydratase beta chain JYK05_RS13815 PF03313 Serine dehydratase alpha chain JYK05_RS13820 PF01266 FAD dependent oxidoreductase JYK05_RS13825 PF04267 Sarcosine oxidase, delta subunit family JYK05_RS13830 PF17806 Sarcosine oxidase A3 domain JYK05_RS13830 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS13830 PF08669 Glycine cleavage T-protein C-terminal barrel domain JYK05_RS13830 PF01571 Aminomethyltransferase folate-binding domain JYK05_RS13860 PF07690 Major Facilitator Superfamily JYK05_RS13865 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JYK05_RS13865 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS13870 PF12833 Helix-turn-helix domain JYK05_RS13870 PF01965 DJ-1/PfpI family JYK05_RS13875 PF00464 Serine hydroxymethyltransferase JYK05_RS13880 PF01244 Membrane dipeptidase (Peptidase family M19) JYK05_RS13890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYK05_RS13895 PF13183 4Fe-4S dicluster domain JYK05_RS13895 PF02754 Cysteine-rich domain JYK05_RS13900 PF00766 Electron transfer flavoprotein FAD-binding domain JYK05_RS13900 PF01012 Electron transfer flavoprotein domain JYK05_RS13910 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYK05_RS13910 PF00355 Rieske [2Fe-2S] domain JYK05_RS13915 PF00175 Oxidoreductase NAD-binding domain JYK05_RS13915 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS13915 PF00970 Oxidoreductase FAD-binding domain JYK05_RS13920 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JYK05_RS13925 PF00551 Formyl transferase JYK05_RS13940 PF00403 Heavy-metal-associated domain JYK05_RS13965 PF07690 Major Facilitator Superfamily JYK05_RS13970 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS13975 PF00155 Aminotransferase class I and II JYK05_RS13980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS13980 PF03466 LysR substrate binding domain JYK05_RS13985 PF13458 Periplasmic binding protein JYK05_RS14000 PF03795 YCII-related domain JYK05_RS14005 PF00356 Bacterial regulatory proteins, lacI family JYK05_RS14010 PF00005 ABC transporter JYK05_RS14015 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS14020 PF13407 Periplasmic binding protein domain JYK05_RS14030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK05_RS14030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK05_RS14045 PF03527 RHS protein JYK05_RS14045 PF05593 RHS Repeat JYK05_RS14055 PF09618 CRISPR-associated protein (Cas_Csy4) JYK05_RS14060 PF09615 CRISPR-associated protein (Cas_Csy3) JYK05_RS14065 PF09614 CRISPR-associated protein (Cas_Csy2) JYK05_RS14070 PF09611 CRISPR-associated protein (Cas_Csy1) JYK05_RS14075 PF18019 HD domain JYK05_RS14080 PF01867 CRISPR associated protein Cas1 JYK05_RS14085 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK05_RS14085 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JYK05_RS14095 PF08546 Ketopantoate reductase PanE/ApbA C terminal JYK05_RS14095 PF02558 Ketopantoate reductase PanE/ApbA JYK05_RS14115 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS14115 PF07729 FCD domain JYK05_RS14120 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYK05_RS14120 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK05_RS14125 PF01261 Xylose isomerase-like TIM barrel JYK05_RS14130 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS14140 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS14145 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS14145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS14145 PF00672 HAMP domain JYK05_RS14150 PF00072 Response regulator receiver domain JYK05_RS14150 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS14155 PF01292 Prokaryotic cytochrome b561 JYK05_RS14160 PF00174 Oxidoreductase molybdopterin binding domain JYK05_RS14170 PF00330 Aconitase family (aconitate hydratase) JYK05_RS14170 PF00694 Aconitase C-terminal domain JYK05_RS14175 PF03972 MmgE/PrpD family JYK05_RS14185 PF00285 Citrate synthase, C-terminal domain JYK05_RS14195 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JYK05_RS14195 PF00056 lactate/malate dehydrogenase, NAD binding domain JYK05_RS14200 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS14200 PF07702 UTRA domain JYK05_RS14205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JYK05_RS14215 PF02910 Fumarate reductase flavoprotein C-term JYK05_RS14215 PF00890 FAD binding domain JYK05_RS14220 PF13085 2Fe-2S iron-sulfur cluster binding domain JYK05_RS14225 PF03937 Flavinator of succinate dehydrogenase JYK05_RS14230 PF00285 Citrate synthase, C-terminal domain JYK05_RS14235 PF00330 Aconitase family (aconitate hydratase) JYK05_RS14240 PF00694 Aconitase C-terminal domain JYK05_RS14245 PF00180 Isocitrate/isopropylmalate dehydrogenase JYK05_RS14255 PF01118 Semialdehyde dehydrogenase, NAD binding domain JYK05_RS14255 PF02774 Semialdehyde dehydrogenase, dimerisation domain JYK05_RS14265 PF01416 tRNA pseudouridine synthase JYK05_RS14270 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JYK05_RS14275 PF00291 Pyridoxal-phosphate dependent enzyme JYK05_RS14280 PF01555 DNA methylase JYK05_RS14285 PF00290 Tryptophan synthase alpha chain JYK05_RS14290 PF01039 Carboxyl transferase domain JYK05_RS14290 PF17848 Acetyl-coA carboxylase zinc finger domain JYK05_RS14295 PF02875 Mur ligase family, glutamate ligase domain JYK05_RS14295 PF08245 Mur ligase middle domain JYK05_RS14310 PF00156 Phosphoribosyl transferase domain JYK05_RS14320 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JYK05_RS14330 PF13614 AAA domain JYK05_RS14330 PF13807 G-rich domain on putative tyrosine kinase JYK05_RS14330 PF02706 Chain length determinant protein JYK05_RS14340 PF00534 Glycosyl transferases group 1 JYK05_RS14340 PF13439 Glycosyltransferase Family 4 JYK05_RS14345 PF13439 Glycosyltransferase Family 4 JYK05_RS14345 PF00534 Glycosyl transferases group 1 JYK05_RS14350 PF00534 Glycosyl transferases group 1 JYK05_RS14370 PF00571 CBS domain JYK05_RS14370 PF03471 Transporter associated domain JYK05_RS14370 PF01595 Cyclin M transmembrane N-terminal domain JYK05_RS14375 PF00128 Alpha amylase, catalytic domain JYK05_RS14380 PF02446 4-alpha-glucanotransferase JYK05_RS14385 PF11941 Domain of unknown function (DUF3459) JYK05_RS14385 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYK05_RS14385 PF00128 Alpha amylase, catalytic domain JYK05_RS14390 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYK05_RS14390 PF00128 Alpha amylase, catalytic domain JYK05_RS14395 PF00128 Alpha amylase, catalytic domain JYK05_RS14395 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYK05_RS14395 PF02806 Alpha amylase, C-terminal all-beta domain JYK05_RS14400 PF00128 Alpha amylase, catalytic domain JYK05_RS14400 PF16657 Maltogenic Amylase, C-terminal domain JYK05_RS14405 PF00128 Alpha amylase, catalytic domain JYK05_RS14405 PF11896 Domain of unknown function (DUF3416) JYK05_RS14410 PF00534 Glycosyl transferases group 1 JYK05_RS14410 PF08323 Starch synthase catalytic domain JYK05_RS14420 PF12318 Membrane bound FAD containing D-sorbitol dehydrogenase JYK05_RS14425 PF05199 GMC oxidoreductase JYK05_RS14425 PF00732 GMC oxidoreductase JYK05_RS14435 PF00149 Calcineurin-like phosphoesterase JYK05_RS14450 PF09722 Protein of unknown function (DUF2384) JYK05_RS14475 PF01384 Phosphate transporter family JYK05_RS14480 PF03459 TOBE domain JYK05_RS14480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS14485 PF01569 PAP2 superfamily JYK05_RS14505 PF01636 Phosphotransferase enzyme family JYK05_RS14515 PF01048 Phosphorylase superfamily JYK05_RS14515 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JYK05_RS14525 PF03641 Possible lysine decarboxylase JYK05_RS14530 PF01367 5'-3' exonuclease, C-terminal SAM fold JYK05_RS14530 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JYK05_RS14530 PF00476 DNA polymerase family A JYK05_RS14530 PF01612 3'-5' exonuclease JYK05_RS14535 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS14540 PF01738 Dienelactone hydrolase family JYK05_RS14545 PF00581 Rhodanese-like domain JYK05_RS14555 PF02609 Exonuclease VII small subunit JYK05_RS14560 PF00348 Polyprenyl synthetase JYK05_RS14565 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JYK05_RS14565 PF02779 Transketolase, pyrimidine binding domain JYK05_RS14565 PF02780 Transketolase, C-terminal domain JYK05_RS14570 PF02649 Type I GTP cyclohydrolase folE2 JYK05_RS14575 PF03466 LysR substrate binding domain JYK05_RS14575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS14590 PF00814 Glycoprotease family JYK05_RS14605 PF08278 DNA primase DnaG DnaB-binding JYK05_RS14605 PF10410 DnaB-helicase binding domain of primase JYK05_RS14605 PF08275 DNA primase catalytic core, N-terminal domain JYK05_RS14605 PF01807 CHC2 zinc finger JYK05_RS14610 PF04545 Sigma-70, region 4 JYK05_RS14610 PF04546 Sigma-70, non-essential region JYK05_RS14610 PF03979 Sigma-70 factor, region 1.1 JYK05_RS14610 PF00140 Sigma-70 factor, region 1.2 JYK05_RS14610 PF04542 Sigma-70 region 2 JYK05_RS14610 PF04539 Sigma-70 region 3 JYK05_RS14725 PF10042 Uncharacterized conserved protein (DUF2278) JYK05_RS14755 PF05717 IS66 Orf2 like protein JYK05_RS14800 PF01119 DNA mismatch repair protein, C-terminal domain JYK05_RS14800 PF08676 MutL C terminal dimerisation domain JYK05_RS14820 PF00816 H-NS histone family JYK05_RS14850 PF13195 Protein of unknown function (DUF4011) JYK05_RS14850 PF13086 AAA domain JYK05_RS14850 PF13087 AAA domain JYK05_RS14850 PF13086 AAA domain JYK05_RS14850 PF13087 AAA domain JYK05_RS14850 PF13195 Protein of unknown function (DUF4011) JYK05_RS14860 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS14860 PF07724 AAA domain (Cdc48 subfamily) JYK05_RS14860 PF17871 AAA lid domain JYK05_RS14860 PF10431 C-terminal, D2-small domain, of ClpB protein JYK05_RS14860 PF02861 Clp amino terminal domain, pathogenicity island component JYK05_RS14895 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS14895 PF07702 UTRA domain JYK05_RS14985 PF00171 Aldehyde dehydrogenase family JYK05_RS14995 PF03466 LysR substrate binding domain JYK05_RS14995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS15000 PF07690 Major Facilitator Superfamily JYK05_RS15005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS15005 PF03466 LysR substrate binding domain JYK05_RS15010 PF08546 Ketopantoate reductase PanE/ApbA C terminal JYK05_RS15010 PF02558 Ketopantoate reductase PanE/ApbA JYK05_RS15020 PF07729 FCD domain JYK05_RS15020 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS15025 PF00549 CoA-ligase JYK05_RS15025 PF02629 CoA binding domain JYK05_RS15030 PF00549 CoA-ligase JYK05_RS15030 PF08442 ATP-grasp domain JYK05_RS15035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK05_RS15035 PF00205 Thiamine pyrophosphate enzyme, central domain JYK05_RS15035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK05_RS15040 PF02515 CoA-transferase family III JYK05_RS15045 PF13380 CoA binding domain JYK05_RS15045 PF13607 Succinyl-CoA ligase like flavodoxin domain JYK05_RS15060 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS15060 PF00072 Response regulator receiver domain JYK05_RS15065 PF06745 KaiC JYK05_RS15080 PF00691 OmpA family JYK05_RS15080 PF01389 OmpA-like transmembrane domain JYK05_RS15085 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JYK05_RS15085 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JYK05_RS15100 PF00561 alpha/beta hydrolase fold JYK05_RS15105 PF01554 MatE JYK05_RS15110 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JYK05_RS15120 PF00083 Sugar (and other) transporter JYK05_RS15135 PF12833 Helix-turn-helix domain JYK05_RS15135 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JYK05_RS15140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS15140 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS15140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS15145 PF13193 AMP-binding enzyme C-terminal domain JYK05_RS15145 PF00501 AMP-binding enzyme JYK05_RS15160 PF01594 AI-2E family transporter JYK05_RS15165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK05_RS15165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK05_RS15185 PF00005 ABC transporter JYK05_RS15190 PF01061 ABC-2 type transporter JYK05_RS15195 PF01641 SelR domain JYK05_RS15220 PF07687 Peptidase dimerisation domain JYK05_RS15220 PF01546 Peptidase family M20/M25/M40 JYK05_RS15225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS15225 PF00672 HAMP domain JYK05_RS15225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS15225 PF00672 HAMP domain JYK05_RS15225 PF17200 Single Cache domain 2 JYK05_RS15225 PF17200 Single Cache domain 2 JYK05_RS15245 PF03167 Uracil DNA glycosylase superfamily JYK05_RS15255 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK05_RS15255 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK05_RS15260 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK05_RS15260 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK05_RS15265 PF10518 TAT (twin-arginine translocation) pathway signal sequence JYK05_RS15265 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS15265 PF01799 [2Fe-2S] binding domain JYK05_RS15290 PF04151 Bacterial pre-peptidase C-terminal domain JYK05_RS15290 PF09286 Pro-kumamolisin, activation domain JYK05_RS15300 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS15300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS15300 PF00989 PAS fold JYK05_RS15300 PF01627 Hpt domain JYK05_RS15300 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS15300 PF00072 Response regulator receiver domain JYK05_RS15335 PF08402 TOBE domain JYK05_RS15335 PF00005 ABC transporter JYK05_RS15340 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS15345 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS15350 PF00343 Carbohydrate phosphorylase JYK05_RS15370 PF02470 MlaD protein JYK05_RS15375 PF04403 Paraquat-inducible protein A JYK05_RS15380 PF02321 Outer membrane efflux protein JYK05_RS15385 PF00873 AcrB/AcrD/AcrF family JYK05_RS15390 PF13533 Biotin-lipoyl like JYK05_RS15400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYK05_RS15405 PF02080 TrkA-C domain JYK05_RS15405 PF06826 Predicted Permease Membrane Region JYK05_RS15410 PF00155 Aminotransferase class I and II JYK05_RS15415 PF13609 Gram-negative porin JYK05_RS15430 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS15435 PF00083 Sugar (and other) transporter JYK05_RS15445 PF16859 Tetracyclin repressor-like, C-terminal domain JYK05_RS15445 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS15450 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS15450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS15450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS15455 PF01039 Carboxyl transferase domain JYK05_RS15460 PF00289 Biotin carboxylase, N-terminal domain JYK05_RS15460 PF00364 Biotin-requiring enzyme JYK05_RS15460 PF02785 Biotin carboxylase C-terminal domain JYK05_RS15460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYK05_RS15465 PF04972 BON domain JYK05_RS15465 PF00691 OmpA family JYK05_RS15485 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JYK05_RS15485 PF00775 Dioxygenase JYK05_RS15490 PF03466 LysR substrate binding domain JYK05_RS15490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS15495 PF00072 Response regulator receiver domain JYK05_RS15495 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS15505 PF00561 alpha/beta hydrolase fold JYK05_RS15510 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS15510 PF10442 FIST C domain JYK05_RS15510 PF08495 FIST N domain JYK05_RS15510 PF00563 EAL domain JYK05_RS15525 PF08448 PAS fold JYK05_RS15525 PF00563 EAL domain JYK05_RS15525 PF08447 PAS fold JYK05_RS15525 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS15535 PF17391 Urocanase N-terminal domain JYK05_RS15535 PF17392 Urocanase C-terminal domain JYK05_RS15535 PF01175 Urocanase Rossmann-like domain JYK05_RS15540 PF01979 Amidohydrolase family JYK05_RS15545 PF04226 Transglycosylase associated protein JYK05_RS15555 PF05736 OprF membrane domain JYK05_RS15555 PF00691 OmpA family JYK05_RS15570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS15570 PF03466 LysR substrate binding domain JYK05_RS15575 PF00924 Mechanosensitive ion channel JYK05_RS15585 PF01112 Asparaginase JYK05_RS15590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK05_RS15590 PF00005 ABC transporter JYK05_RS15595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK05_RS15600 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS15605 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK05_RS15605 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS15610 PF03576 Peptidase family S58 JYK05_RS15625 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JYK05_RS15630 PF00583 Acetyltransferase (GNAT) family JYK05_RS15635 PF00221 Aromatic amino acid lyase JYK05_RS15640 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS15640 PF07702 UTRA domain JYK05_RS15665 PF02611 CDP-diacylglycerol pyrophosphatase JYK05_RS15670 PF01894 Uncharacterised protein family UPF0047 JYK05_RS15685 PF01145 SPFH domain / Band 7 family JYK05_RS15685 PF16200 C-terminal region of band_7 JYK05_RS15695 PF00202 Aminotransferase class-III JYK05_RS15700 PF00155 Aminotransferase class I and II JYK05_RS15710 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS15715 PF00011 Hsp20/alpha crystallin family JYK05_RS15725 PF08546 Ketopantoate reductase PanE/ApbA C terminal JYK05_RS15725 PF02558 Ketopantoate reductase PanE/ApbA JYK05_RS15735 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS15735 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS15735 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS15760 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain JYK05_RS15760 PF05594 Haemagluttinin repeat JYK05_RS15760 PF13018 Extended Signal Peptide of Type V secretion system JYK05_RS15760 PF05860 haemagglutination activity domain JYK05_RS15760 PF13332 Hemagglutinin repeat JYK05_RS15765 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JYK05_RS15765 PF17287 POTRA domain JYK05_RS15765 PF08479 POTRA domain, ShlB-type JYK05_RS15770 PF01648 4'-phosphopantetheinyl transferase superfamily JYK05_RS15775 PF01863 Protein of unknown function DUF45 JYK05_RS15795 PF01565 FAD binding domain JYK05_RS15795 PF08031 Berberine and berberine like JYK05_RS15805 PF18331 PKHD-type hydroxylase C-terminal domain JYK05_RS15805 PF13640 2OG-Fe(II) oxygenase superfamily JYK05_RS15810 PF07715 TonB-dependent Receptor Plug Domain JYK05_RS15810 PF00593 TonB dependent receptor JYK05_RS15815 PF00909 Ammonium Transporter Family JYK05_RS15820 PF08448 PAS fold JYK05_RS15820 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS15820 PF13188 PAS domain JYK05_RS15820 PF00072 Response regulator receiver domain JYK05_RS15820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS15830 PF07995 Glucose / Sorbosone dehydrogenase JYK05_RS15855 PF08042 PqqA family JYK05_RS15875 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS15875 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS15875 PF00563 EAL domain JYK05_RS15880 PF12833 Helix-turn-helix domain JYK05_RS15880 PF01965 DJ-1/PfpI family JYK05_RS15885 PF01965 DJ-1/PfpI family JYK05_RS15905 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JYK05_RS15910 PF00317 Ribonucleotide reductase, all-alpha domain JYK05_RS15910 PF03477 ATP cone domain JYK05_RS15910 PF02867 Ribonucleotide reductase, barrel domain JYK05_RS15920 PF02753 Pili assembly chaperone PapD, C-terminal domain JYK05_RS15920 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JYK05_RS15925 PF13954 PapC N-terminal domain JYK05_RS15925 PF13953 PapC C-terminal domain JYK05_RS15925 PF00577 Outer membrane usher protein JYK05_RS15950 PF00664 ABC transporter transmembrane region JYK05_RS15950 PF00005 ABC transporter JYK05_RS15950 PF03412 Peptidase C39 family JYK05_RS15980 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS15980 PF00072 Response regulator receiver domain JYK05_RS15990 PF01584 CheW-like domain JYK05_RS15990 PF00072 Response regulator receiver domain JYK05_RS15995 PF00571 CBS domain JYK05_RS16015 PF02230 Phospholipase/Carboxylesterase JYK05_RS16020 PF17149 Periplasmic sensor domain found in signal transduction proteins JYK05_RS16020 PF00672 HAMP domain JYK05_RS16020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS16020 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS16020 PF01627 Hpt domain JYK05_RS16020 PF00072 Response regulator receiver domain JYK05_RS16030 PF00012 Hsp70 protein JYK05_RS16035 PF00012 Hsp70 protein JYK05_RS16045 PF00005 ABC transporter JYK05_RS16050 PF08376 Nitrate and nitrite sensing JYK05_RS16050 PF03861 ANTAR domain JYK05_RS16055 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK05_RS16065 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYK05_RS16065 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS16065 PF18267 Rubredoxin NAD+ reductase C-terminal domain JYK05_RS16065 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYK05_RS16065 PF04324 BFD-like [2Fe-2S] binding domain JYK05_RS16070 PF13806 Rieske-like [2Fe-2S] domain JYK05_RS16070 PF04324 BFD-like [2Fe-2S] binding domain JYK05_RS16070 PF18267 Rubredoxin NAD+ reductase C-terminal domain JYK05_RS16070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYK05_RS16070 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYK05_RS16070 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS16075 PF04324 BFD-like [2Fe-2S] binding domain JYK05_RS16075 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS16075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYK05_RS16075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JYK05_RS16075 PF18267 Rubredoxin NAD+ reductase C-terminal domain JYK05_RS16080 PF01568 Molydopterin dinucleotide binding domain JYK05_RS16080 PF00384 Molybdopterin oxidoreductase JYK05_RS16080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JYK05_RS16080 PF04324 BFD-like [2Fe-2S] binding domain JYK05_RS16085 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS16085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS16085 PF00672 HAMP domain JYK05_RS16090 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS16090 PF00072 Response regulator receiver domain JYK05_RS16095 PF02321 Outer membrane efflux protein JYK05_RS16105 PF00873 AcrB/AcrD/AcrF family JYK05_RS16125 PF13677 Membrane MotB of proton-channel complex MotA/MotB JYK05_RS16125 PF00691 OmpA family JYK05_RS16130 PF01618 MotA/TolQ/ExbB proton channel family JYK05_RS16150 PF07690 Major Facilitator Superfamily JYK05_RS16155 PF07690 Major Facilitator Superfamily JYK05_RS16160 PF00072 Response regulator receiver domain JYK05_RS16175 PF13180 PDZ domain JYK05_RS16185 PF01037 Lrp/AsnC ligand binding domain JYK05_RS16190 PF00456 Transketolase, thiamine diphosphate binding domain JYK05_RS16190 PF17831 Pyruvate dehydrogenase E1 component middle domain JYK05_RS16195 PF00156 Phosphoribosyl transferase domain JYK05_RS16195 PF05139 Erythromycin esterase JYK05_RS16205 PF13460 NAD(P)H-binding JYK05_RS16225 PF03466 LysR substrate binding domain JYK05_RS16225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS16230 PF07859 alpha/beta hydrolase fold JYK05_RS16235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYK05_RS16240 PF00873 AcrB/AcrD/AcrF family JYK05_RS16245 PF02321 Outer membrane efflux protein JYK05_RS16255 PF03976 Polyphosphate kinase 2 (PPK2) JYK05_RS16260 PF02423 Ornithine cyclodeaminase/mu-crystallin family JYK05_RS16300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JYK05_RS16300 PF07685 CobB/CobQ-like glutamine amidotransferase domain JYK05_RS16305 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JYK05_RS16315 PF07683 Cobalamin synthesis protein cobW C-terminal domain JYK05_RS16315 PF02492 CobW/HypB/UreG, nucleotide-binding domain JYK05_RS16320 PF02514 CobN/Magnesium Chelatase JYK05_RS16325 PF13519 von Willebrand factor type A domain JYK05_RS16325 PF07728 AAA domain (dynein-related subfamily) JYK05_RS16325 PF17863 AAA lid domain JYK05_RS16335 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK05_RS16340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK05_RS16345 PF02570 Precorrin-8X methylmutase JYK05_RS16350 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JYK05_RS16355 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK05_RS16360 PF01888 CbiD JYK05_RS16365 PF02571 Precorrin-6x reductase CbiJ/CobK JYK05_RS16370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JYK05_RS16375 PF13811 Domain of unknown function (DUF4186) JYK05_RS16380 PF03741 Integral membrane protein TerC family JYK05_RS16380 PF03471 Transporter associated domain JYK05_RS16395 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JYK05_RS16400 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JYK05_RS16405 PF00581 Rhodanese-like domain JYK05_RS16410 PF03773 Predicted permease JYK05_RS16420 PF02322 Cytochrome bd terminal oxidase subunit II JYK05_RS16425 PF01654 Cytochrome bd terminal oxidase subunit I JYK05_RS16430 PF04228 Putative neutral zinc metallopeptidase JYK05_RS16440 PF00723 Glycosyl hydrolases family 15 JYK05_RS16445 PF01565 FAD binding domain JYK05_RS16445 PF02913 FAD linked oxidases, C-terminal domain JYK05_RS16455 PF08281 Sigma-70, region 4 JYK05_RS16455 PF04542 Sigma-70 region 2 JYK05_RS16470 PF00199 Catalase JYK05_RS16485 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS16490 PF00005 ABC transporter JYK05_RS16495 PF13407 Periplasmic binding protein domain JYK05_RS16505 PF12833 Helix-turn-helix domain JYK05_RS16510 PF01263 Aldose 1-epimerase JYK05_RS16535 PF08546 Ketopantoate reductase PanE/ApbA C terminal JYK05_RS16535 PF02558 Ketopantoate reductase PanE/ApbA JYK05_RS16550 PF00578 AhpC/TSA family JYK05_RS16550 PF10417 C-terminal domain of 1-Cys peroxiredoxin JYK05_RS16555 PF13520 Amino acid permease JYK05_RS16560 PF01144 Coenzyme A transferase JYK05_RS16570 PF08281 Sigma-70, region 4 JYK05_RS16570 PF04542 Sigma-70 region 2 JYK05_RS16585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK05_RS16610 PF00158 Sigma-54 interaction domain JYK05_RS16610 PF02954 Bacterial regulatory protein, Fis family JYK05_RS16615 PF00005 ABC transporter JYK05_RS16615 PF03412 Peptidase C39 family JYK05_RS16615 PF00664 ABC transporter transmembrane region JYK05_RS16630 PF16697 Inner membrane component of T3SS, cytoplasmic domain JYK05_RS16635 PF02321 Outer membrane efflux protein JYK05_RS16660 PF03781 Sulfatase-modifying factor enzyme 1 JYK05_RS16720 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS16720 PF00107 Zinc-binding dehydrogenase JYK05_RS16725 PF02203 Tar ligand binding domain homologue JYK05_RS16725 PF00672 HAMP domain JYK05_RS16725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS16735 PF02146 Sir2 family JYK05_RS16740 PF00107 Zinc-binding dehydrogenase JYK05_RS16740 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS16755 PF03922 OmpW family JYK05_RS16775 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS16780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS16785 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYK05_RS16800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS16800 PF00034 Cytochrome c JYK05_RS16805 PF00034 Cytochrome c JYK05_RS16810 PF02954 Bacterial regulatory protein, Fis family JYK05_RS16810 PF00158 Sigma-54 interaction domain JYK05_RS16815 PF00042 Globin JYK05_RS16815 PF00970 Oxidoreductase FAD-binding domain JYK05_RS16815 PF00175 Oxidoreductase NAD-binding domain JYK05_RS16825 PF00005 ABC transporter JYK05_RS16825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK05_RS16830 PF00005 ABC transporter JYK05_RS16830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK05_RS16835 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS16835 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK05_RS16840 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS16845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK05_RS16865 PF00860 Permease family JYK05_RS16880 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS16885 PF01699 Sodium/calcium exchanger protein JYK05_RS16890 PF02566 OsmC-like protein JYK05_RS16895 PF01266 FAD dependent oxidoreductase JYK05_RS16900 PF01323 DSBA-like thioredoxin domain JYK05_RS16930 PF07690 Major Facilitator Superfamily JYK05_RS16955 PF13439 Glycosyltransferase Family 4 JYK05_RS16955 PF00534 Glycosyl transferases group 1 JYK05_RS16965 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JYK05_RS16970 PF02543 Carbamoyltransferase N-terminus JYK05_RS16970 PF16861 Carbamoyltransferase C-terminus JYK05_RS16980 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JYK05_RS16990 PF16363 GDP-mannose 4,6 dehydratase JYK05_RS17000 PF00005 ABC transporter JYK05_RS17000 PF00664 ABC transporter transmembrane region JYK05_RS17005 PF03104 DNA polymerase family B, exonuclease domain JYK05_RS17005 PF00136 DNA polymerase family B JYK05_RS17010 PF05280 Flagellar transcriptional activator (FlhC) JYK05_RS17015 PF05247 Flagellar transcriptional activator (FlhD) JYK05_RS17025 PF00924 Mechanosensitive ion channel JYK05_RS17040 PF02769 AIR synthase related protein, C-terminal domain JYK05_RS17040 PF00586 AIR synthase related protein, N-terminal domain JYK05_RS17080 PF08281 Sigma-70, region 4 JYK05_RS17080 PF04542 Sigma-70 region 2 JYK05_RS17090 PF12833 Helix-turn-helix domain JYK05_RS17090 PF06719 AraC-type transcriptional regulator N-terminus JYK05_RS17095 PF00248 Aldo/keto reductase family JYK05_RS17105 PF01494 FAD binding domain JYK05_RS17115 PF01925 Sulfite exporter TauE/SafE JYK05_RS17120 PF04185 Phosphoesterase family JYK05_RS17125 PF01042 Endoribonuclease L-PSP JYK05_RS17130 PF03466 LysR substrate binding domain JYK05_RS17130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS17140 PF02615 Malate/L-lactate dehydrogenase JYK05_RS17145 PF01546 Peptidase family M20/M25/M40 JYK05_RS17150 PF01804 Penicillin amidase JYK05_RS17170 PF03706 Lysylphosphatidylglycerol synthase TM region JYK05_RS17170 PF09924 Uncharacterised conserved protein (DUF2156) JYK05_RS17185 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS17185 PF00072 Response regulator receiver domain JYK05_RS17200 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS17205 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS17210 PF00005 ABC transporter JYK05_RS17210 PF17912 MalK OB fold domain JYK05_RS17225 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS17225 PF07729 FCD domain JYK05_RS17230 PF05853 beta-keto acid cleavage enzyme JYK05_RS17250 PF00072 Response regulator receiver domain JYK05_RS17250 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS17255 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS17255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS17255 PF00672 HAMP domain JYK05_RS17280 PF03793 PASTA domain JYK05_RS17280 PF00069 Protein kinase domain JYK05_RS17300 PF00271 Helicase conserved C-terminal domain JYK05_RS17300 PF00270 DEAD/DEAH box helicase JYK05_RS17300 PF08494 DEAD/H associated JYK05_RS17310 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase JYK05_RS17310 PF09363 XFP C-terminal domain JYK05_RS17310 PF09364 XFP N-terminal domain JYK05_RS17315 PF00871 Acetokinase family JYK05_RS17320 PF07690 Major Facilitator Superfamily JYK05_RS17325 PF00682 HMGL-like JYK05_RS17330 PF02515 CoA-transferase family III JYK05_RS17335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS17335 PF03466 LysR substrate binding domain JYK05_RS17355 PF01266 FAD dependent oxidoreductase JYK05_RS17360 PF00171 Aldehyde dehydrogenase family JYK05_RS17370 PF00067 Cytochrome P450 JYK05_RS17375 PF08501 Shikimate dehydrogenase substrate binding domain JYK05_RS17375 PF01488 Shikimate / quinate 5-dehydrogenase JYK05_RS17375 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYK05_RS17395 PF08543 Phosphomethylpyrimidine kinase JYK05_RS17400 PF00483 Nucleotidyl transferase JYK05_RS17405 PF08323 Starch synthase catalytic domain JYK05_RS17405 PF00534 Glycosyl transferases group 1 JYK05_RS17415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYK05_RS17415 PF00403 Heavy-metal-associated domain JYK05_RS17415 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS17425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYK05_RS17425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK05_RS17430 PF00171 Aldehyde dehydrogenase family JYK05_RS17440 PF08525 Opacity-associated protein A N-terminal motif JYK05_RS17440 PF01476 LysM domain JYK05_RS17440 PF01551 Peptidase family M23 JYK05_RS17455 PF01544 CorA-like Mg2+ transporter protein JYK05_RS17460 PF01176 Translation initiation factor 1A / IF-1 JYK05_RS17470 PF00480 ROK family JYK05_RS17475 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JYK05_RS17475 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JYK05_RS17480 PF00797 N-acetyltransferase JYK05_RS17485 PF00905 Penicillin binding protein transpeptidase domain JYK05_RS17485 PF03717 Penicillin-binding Protein dimerisation domain JYK05_RS17510 PF01226 Formate/nitrite transporter JYK05_RS17515 PF03824 High-affinity nickel-transport protein JYK05_RS17530 PF00296 Luciferase-like monooxygenase JYK05_RS17550 PF13407 Periplasmic binding protein domain JYK05_RS17555 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS17560 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS17565 PF00005 ABC transporter JYK05_RS17570 PF04909 Amidohydrolase JYK05_RS17575 PF05336 L-rhamnose mutarotase JYK05_RS17580 PF03466 LysR substrate binding domain JYK05_RS17580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS17590 PF13378 Enolase C-terminal domain-like JYK05_RS17590 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYK05_RS17610 PF00313 'Cold-shock' DNA-binding domain JYK05_RS17625 PF00072 Response regulator receiver domain JYK05_RS17625 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS17625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS17625 PF09308 LuxQ, periplasmic JYK05_RS17645 PF00072 Response regulator receiver domain JYK05_RS17675 PF00892 EamA-like transporter family JYK05_RS17710 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA JYK05_RS17715 PF00925 GTP cyclohydrolase II JYK05_RS17725 PF00578 AhpC/TSA family JYK05_RS17725 PF10417 C-terminal domain of 1-Cys peroxiredoxin JYK05_RS17730 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS17730 PF13192 Thioredoxin domain JYK05_RS17735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS17735 PF07689 KaiB domain JYK05_RS17735 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS17745 PF03466 LysR substrate binding domain JYK05_RS17745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS17750 PF00171 Aldehyde dehydrogenase family JYK05_RS17795 PF04286 Protein of unknown function (DUF445) JYK05_RS17805 PF17755 UvrA DNA-binding domain JYK05_RS17805 PF17760 UvrA interaction domain JYK05_RS17810 PF00561 alpha/beta hydrolase fold JYK05_RS17865 PF00437 Type II/IV secretion system protein JYK05_RS17870 PF10609 NUBPL iron-transfer P-loop NTPase JYK05_RS17870 PF01883 Iron-sulfur cluster assembly protein JYK05_RS17880 PF04972 BON domain JYK05_RS17880 PF00263 Bacterial type II and III secretion system protein JYK05_RS17880 PF13629 Pilus formation protein N terminal region JYK05_RS17905 PF02245 Methylpurine-DNA glycosylase (MPG) JYK05_RS17910 PF13458 Periplasmic binding protein JYK05_RS17915 PF00005 ABC transporter JYK05_RS17920 PF00005 ABC transporter JYK05_RS17920 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYK05_RS17945 PF01227 GTP cyclohydrolase I JYK05_RS17950 PF00132 Bacterial transferase hexapeptide (six repeats) JYK05_RS17990 PF00171 Aldehyde dehydrogenase family JYK05_RS17995 PF07690 Major Facilitator Superfamily JYK05_RS18000 PF00582 Universal stress protein family JYK05_RS18005 PF00027 Cyclic nucleotide-binding domain JYK05_RS18005 PF13545 Crp-like helix-turn-helix domain JYK05_RS18010 PF03781 Sulfatase-modifying factor enzyme 1 JYK05_RS18015 PF00534 Glycosyl transferases group 1 JYK05_RS18015 PF13439 Glycosyltransferase Family 4 JYK05_RS18035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JYK05_RS18040 PF03552 Cellulose synthase JYK05_RS18040 PF00535 Glycosyl transferase family 2 JYK05_RS18040 PF07238 PilZ domain JYK05_RS18045 PF03170 Bacterial cellulose synthase subunit JYK05_RS18050 PF01270 Glycosyl hydrolases family 8 JYK05_RS18055 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JYK05_RS18060 PF03358 NADPH-dependent FMN reductase JYK05_RS18070 PF00545 ribonuclease JYK05_RS18075 PF13193 AMP-binding enzyme C-terminal domain JYK05_RS18075 PF00501 AMP-binding enzyme JYK05_RS18080 PF03466 LysR substrate binding domain JYK05_RS18080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS18095 PF13614 AAA domain JYK05_RS18100 PF00563 EAL domain JYK05_RS18100 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS18100 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS18120 PF04116 Fatty acid hydroxylase superfamily JYK05_RS18135 PF01339 CheB methylesterase JYK05_RS18140 PF03358 NADPH-dependent FMN reductase JYK05_RS18145 PF00005 ABC transporter JYK05_RS18150 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS18155 PF00296 Luciferase-like monooxygenase JYK05_RS18160 PF09084 NMT1/THI5 like JYK05_RS18165 PF03180 NLPA lipoprotein JYK05_RS18170 PF02702 Osmosensitive K+ channel His kinase sensor domain JYK05_RS18170 PF13493 Domain of unknown function (DUF4118) JYK05_RS18170 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS18170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS18175 PF13426 PAS domain JYK05_RS18175 PF08448 PAS fold JYK05_RS18175 PF08447 PAS fold JYK05_RS18175 PF05231 MASE1 JYK05_RS18175 PF00563 EAL domain JYK05_RS18175 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS18185 PF03275 UDP-galactopyranose mutase JYK05_RS18195 PF04321 RmlD substrate binding domain JYK05_RS18200 PF03466 LysR substrate binding domain JYK05_RS18200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS18205 PF02615 Malate/L-lactate dehydrogenase JYK05_RS18210 PF07690 Major Facilitator Superfamily JYK05_RS18220 PF00072 Response regulator receiver domain JYK05_RS18220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS18220 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS18220 PF09308 LuxQ, periplasmic JYK05_RS18225 PF00106 short chain dehydrogenase JYK05_RS18235 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYK05_RS18260 PF17871 AAA lid domain JYK05_RS18260 PF02861 Clp amino terminal domain, pathogenicity island component JYK05_RS18260 PF07724 AAA domain (Cdc48 subfamily) JYK05_RS18260 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS18260 PF10431 C-terminal, D2-small domain, of ClpB protein JYK05_RS18280 PF07690 Major Facilitator Superfamily JYK05_RS18285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYK05_RS18285 PF00529 HlyD membrane-fusion protein of T1SS JYK05_RS18290 PF08448 PAS fold JYK05_RS18290 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS18315 PF01569 PAP2 superfamily JYK05_RS18320 PF08448 PAS fold JYK05_RS18320 PF13188 PAS domain JYK05_RS18320 PF00072 Response regulator receiver domain JYK05_RS18320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS18320 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS18325 PF16864 Dimerisation domain JYK05_RS18325 PF00891 O-methyltransferase domain JYK05_RS18330 PF01810 LysE type translocator JYK05_RS18340 PF02203 Tar ligand binding domain homologue JYK05_RS18340 PF00672 HAMP domain JYK05_RS18340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS18345 PF00563 EAL domain JYK05_RS18345 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS18345 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS18345 PF13188 PAS domain JYK05_RS18350 PF00042 Globin JYK05_RS18350 PF00175 Oxidoreductase NAD-binding domain JYK05_RS18350 PF00970 Oxidoreductase FAD-binding domain JYK05_RS18355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYK05_RS18355 PF13378 Enolase C-terminal domain-like JYK05_RS18360 PF07690 Major Facilitator Superfamily JYK05_RS18365 PF00356 Bacterial regulatory proteins, lacI family JYK05_RS18370 PF00775 Dioxygenase JYK05_RS18370 PF04444 Catechol dioxygenase N terminus JYK05_RS18375 PF02426 Muconolactone delta-isomerase JYK05_RS18380 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS18380 PF14759 Reductase C-terminal JYK05_RS18385 PF00355 Rieske [2Fe-2S] domain JYK05_RS18390 PF00866 Ring hydroxylating beta subunit JYK05_RS18395 PF00355 Rieske [2Fe-2S] domain JYK05_RS18395 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYK05_RS18400 PF14525 AraC-binding-like domain JYK05_RS18400 PF12833 Helix-turn-helix domain JYK05_RS18410 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS18415 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS18420 PF00005 ABC transporter JYK05_RS18425 PF13407 Periplasmic binding protein domain JYK05_RS18430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS18430 PF03466 LysR substrate binding domain JYK05_RS18435 PF02627 Carboxymuconolactone decarboxylase family JYK05_RS18440 PF12680 SnoaL-like domain JYK05_RS18440 PF08281 Sigma-70, region 4 JYK05_RS18440 PF04542 Sigma-70 region 2 JYK05_RS18490 PF04820 Tryptophan halogenase JYK05_RS18495 PF13847 Methyltransferase domain JYK05_RS18495 PF03551 Transcriptional regulator PadR-like family JYK05_RS18510 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK05_RS18510 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK05_RS18515 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK05_RS18515 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK05_RS18530 PF08659 KR domain JYK05_RS18530 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK05_RS18530 PF16197 Ketoacyl-synthetase C-terminal extension JYK05_RS18530 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK05_RS18530 PF08990 Erythronolide synthase docking JYK05_RS18530 PF18369 Polyketide synthase dimerisation element domain JYK05_RS18530 PF00698 Acyl transferase domain JYK05_RS18530 PF00550 Phosphopantetheine attachment site JYK05_RS18530 PF00975 Thioesterase domain JYK05_RS18555 PF00501 AMP-binding enzyme JYK05_RS18555 PF13193 AMP-binding enzyme C-terminal domain JYK05_RS18565 PF00550 Phosphopantetheine attachment site JYK05_RS18585 PF01522 Polysaccharide deacetylase JYK05_RS18600 PF09335 SNARE associated Golgi protein JYK05_RS18605 PF09335 SNARE associated Golgi protein JYK05_RS18610 PF03144 Elongation factor Tu domain 2 JYK05_RS18610 PF09107 Elongation factor SelB, winged helix JYK05_RS18610 PF09106 Elongation factor SelB, winged helix JYK05_RS18610 PF00009 Elongation factor Tu GTP binding domain JYK05_RS18615 PF03841 L-seryl-tRNA selenium transferase JYK05_RS18615 PF12390 Selenocysteine synthase N terminal JYK05_RS18620 PF04216 Protein involved in formate dehydrogenase formation JYK05_RS18625 PF01292 Prokaryotic cytochrome b561 JYK05_RS18630 PF12800 4Fe-4S binding domain JYK05_RS18630 PF09163 Formate dehydrogenase N, transmembrane JYK05_RS18630 PF13247 4Fe-4S dicluster domain JYK05_RS18640 PF03631 Virulence factor BrkB JYK05_RS18645 PF13609 Gram-negative porin JYK05_RS18650 PF03009 Glycerophosphoryl diester phosphodiesterase family JYK05_RS18660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JYK05_RS18660 PF00929 Exonuclease JYK05_RS18660 PF02811 PHP domain JYK05_RS18660 PF11490 DNA polymerase III polC-type N-terminus II JYK05_RS18660 PF07733 Bacterial DNA polymerase III alpha NTPase domain JYK05_RS18660 PF14579 Helix-hairpin-helix motif JYK05_RS18670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS18670 PF03466 LysR substrate binding domain JYK05_RS18685 PF13396 Phospholipase_D-nuclease N-terminal JYK05_RS18685 PF13091 PLD-like domain JYK05_RS18690 PF00248 Aldo/keto reductase family JYK05_RS18705 PF07043 Protein of unknown function (DUF1328) JYK05_RS18710 PF12706 Beta-lactamase superfamily domain JYK05_RS18720 PF00920 Dehydratase family JYK05_RS18725 PF00356 Bacterial regulatory proteins, lacI family JYK05_RS18765 PF00672 HAMP domain JYK05_RS18765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS18765 PF18698 Histidine kinase sensor domain JYK05_RS18765 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS18765 PF00989 PAS fold JYK05_RS18770 PF00989 PAS fold JYK05_RS18770 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS18770 PF18415 Histidine kinase receptor ArcB trans-membrane domain JYK05_RS18770 PF00072 Response regulator receiver domain JYK05_RS18770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS18770 PF01627 Hpt domain JYK05_RS18775 PF13581 Histidine kinase-like ATPase domain JYK05_RS18785 PF01740 STAS domain JYK05_RS18790 PF01740 STAS domain JYK05_RS18790 PF08678 Rsbr N terminal JYK05_RS18795 PF00860 Permease family JYK05_RS18800 PF12146 Serine aminopeptidase, S33 JYK05_RS18815 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS18820 PF00005 ABC transporter JYK05_RS18830 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JYK05_RS18835 PF00817 impB/mucB/samB family JYK05_RS18835 PF11799 impB/mucB/samB family C-terminal domain JYK05_RS18845 PF07690 Major Facilitator Superfamily JYK05_RS18865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS18865 PF03466 LysR substrate binding domain JYK05_RS18880 PF07690 Major Facilitator Superfamily JYK05_RS18925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS18930 PF13360 PQQ-like domain JYK05_RS18935 PF01329 Pterin 4 alpha carbinolamine dehydratase JYK05_RS18945 PF09176 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal JYK05_RS18955 PF02289 Cyclohydrolase (MCH) JYK05_RS18960 PF08443 RimK-like ATP-grasp domain JYK05_RS18960 PF18030 RimK PreATP-grasp domain JYK05_RS18970 PF08714 Formaldehyde-activating enzyme (Fae) JYK05_RS18980 PF02152 Dihydroneopterin aldolase JYK05_RS18985 PF00158 Sigma-54 interaction domain JYK05_RS18985 PF01590 GAF domain JYK05_RS18985 PF02954 Bacterial regulatory protein, Fis family JYK05_RS19000 PF08042 PqqA family JYK05_RS19030 PF00977 Histidine biosynthesis protein JYK05_RS19040 PF07969 Amidohydrolase family JYK05_RS19045 PF01913 Formylmethanofuran-tetrahydromethanopterin formyltransferase JYK05_RS19045 PF02741 FTR, proximal lobe JYK05_RS19055 PF01292 Prokaryotic cytochrome b561 JYK05_RS19060 PF12706 Beta-lactamase superfamily domain JYK05_RS19065 PF03070 TENA/THI-4/PQQC family JYK05_RS19070 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JYK05_RS19075 PF04055 Radical SAM superfamily JYK05_RS19075 PF13186 Iron-sulfur cluster-binding domain JYK05_RS19080 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS19080 PF00072 Response regulator receiver domain JYK05_RS19085 PF07730 Histidine kinase JYK05_RS19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS19125 PF00684 DnaJ central domain JYK05_RS19125 PF00226 DnaJ domain JYK05_RS19125 PF01556 DnaJ C terminal domain JYK05_RS19135 PF01966 HD domain JYK05_RS19140 PF07690 Major Facilitator Superfamily JYK05_RS19165 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS19165 PF08447 PAS fold JYK05_RS19165 PF00563 EAL domain JYK05_RS19165 PF08448 PAS fold JYK05_RS19175 PF03466 LysR substrate binding domain JYK05_RS19175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS19180 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS19185 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS19190 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS19200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS19200 PF03466 LysR substrate binding domain JYK05_RS19210 PF10017 Histidine-specific methyltransferase, SAM-dependent JYK05_RS19215 PF00708 Acylphosphatase JYK05_RS19220 PF00072 Response regulator receiver domain JYK05_RS19220 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS19225 PF01339 CheB methylesterase JYK05_RS19230 PF01739 CheR methyltransferase, SAM binding domain JYK05_RS19230 PF03705 CheR methyltransferase, all-alpha domain JYK05_RS19235 PF09308 LuxQ, periplasmic JYK05_RS19235 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS19235 PF00072 Response regulator receiver domain JYK05_RS19235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS19240 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS19245 PF03971 Monomeric isocitrate dehydrogenase JYK05_RS19260 PF02401 LytB protein JYK05_RS19265 PF06463 Molybdenum Cofactor Synthesis C JYK05_RS19265 PF04055 Radical SAM superfamily JYK05_RS19280 PF04328 Selenoprotein, putative JYK05_RS19285 PF13722 5TM C-terminal transporter carbon starvation CstA JYK05_RS19285 PF02554 Carbon starvation protein CstA JYK05_RS19290 PF07730 Histidine kinase JYK05_RS19290 PF17200 Single Cache domain 2 JYK05_RS19295 PF00072 Response regulator receiver domain JYK05_RS19295 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS19325 PF13243 Squalene-hopene cyclase C-terminal domain JYK05_RS19325 PF13249 Squalene-hopene cyclase N-terminal domain JYK05_RS19330 PF01593 Flavin containing amine oxidoreductase JYK05_RS19340 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS19345 PF04509 CheC-like family JYK05_RS19345 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JYK05_RS19350 PF00072 Response regulator receiver domain JYK05_RS19355 PF00072 Response regulator receiver domain JYK05_RS19355 PF13188 PAS domain JYK05_RS19355 PF08448 PAS fold JYK05_RS19355 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS19355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS19365 PF03358 NADPH-dependent FMN reductase JYK05_RS19370 PF03547 Membrane transport protein JYK05_RS19375 PF08212 Lipocalin-like domain JYK05_RS19385 PF00158 Sigma-54 interaction domain JYK05_RS19385 PF01590 GAF domain JYK05_RS19400 PF00106 short chain dehydrogenase JYK05_RS19405 PF08447 PAS fold JYK05_RS19405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS19415 PF01594 AI-2E family transporter JYK05_RS19420 PF02798 Glutathione S-transferase, N-terminal domain JYK05_RS19425 PF00042 Globin JYK05_RS19425 PF00175 Oxidoreductase NAD-binding domain JYK05_RS19425 PF00970 Oxidoreductase FAD-binding domain JYK05_RS19430 PF03466 LysR substrate binding domain JYK05_RS19430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS19435 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JYK05_RS19435 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JYK05_RS19445 PF03358 NADPH-dependent FMN reductase JYK05_RS19450 PF14437 MafB19-like deaminase JYK05_RS19455 PF01614 Bacterial transcriptional regulator JYK05_RS19455 PF09339 IclR helix-turn-helix domain JYK05_RS19460 PF00083 Sugar (and other) transporter JYK05_RS19460 PF07690 Major Facilitator Superfamily JYK05_RS19465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS19465 PF03466 LysR substrate binding domain JYK05_RS19475 PF08521 Two-component sensor kinase N-terminal JYK05_RS19475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS19475 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS19480 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS19480 PF00072 Response regulator receiver domain JYK05_RS19485 PF02426 Muconolactone delta-isomerase JYK05_RS19490 PF13378 Enolase C-terminal domain-like JYK05_RS19490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYK05_RS19495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS19495 PF03466 LysR substrate binding domain JYK05_RS19500 PF00775 Dioxygenase JYK05_RS19500 PF04444 Catechol dioxygenase N terminus JYK05_RS19505 PF00355 Rieske [2Fe-2S] domain JYK05_RS19505 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYK05_RS19510 PF00866 Ring hydroxylating beta subunit JYK05_RS19515 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS19515 PF00175 Oxidoreductase NAD-binding domain JYK05_RS19515 PF00970 Oxidoreductase FAD-binding domain JYK05_RS19520 PF00106 short chain dehydrogenase JYK05_RS19525 PF01042 Endoribonuclease L-PSP JYK05_RS19535 PF04264 YceI-like domain JYK05_RS19540 PF00107 Zinc-binding dehydrogenase JYK05_RS19540 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS19545 PF00155 Aminotransferase class I and II JYK05_RS19575 PF03447 Homoserine dehydrogenase, NAD binding domain JYK05_RS19575 PF01958 Domain of unknown function DUF108 JYK05_RS19580 PF00171 Aldehyde dehydrogenase family JYK05_RS19590 PF00206 Lyase JYK05_RS19590 PF14698 Argininosuccinate lyase C-terminal JYK05_RS19605 PF00563 EAL domain JYK05_RS19605 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS19605 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS19610 PF00005 ABC transporter JYK05_RS19615 PF00005 ABC transporter JYK05_RS19625 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS19635 PF01425 Amidase JYK05_RS19655 PF01266 FAD dependent oxidoreductase JYK05_RS19660 PF01042 Endoribonuclease L-PSP JYK05_RS19665 PF17645 Arylmalonate decarboxylase JYK05_RS19670 PF13458 Periplasmic binding protein JYK05_RS19685 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYK05_RS19685 PF00005 ABC transporter JYK05_RS19690 PF00005 ABC transporter JYK05_RS19700 PF07729 FCD domain JYK05_RS19700 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS19705 PF00593 TonB dependent receptor JYK05_RS19705 PF07715 TonB-dependent Receptor Plug Domain JYK05_RS19730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK05_RS19730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK05_RS19730 PF00205 Thiamine pyrophosphate enzyme, central domain JYK05_RS19735 PF01593 Flavin containing amine oxidoreductase JYK05_RS19745 PF00005 ABC transporter JYK05_RS19745 PF09383 NIL domain JYK05_RS19750 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS19755 PF02441 Flavoprotein JYK05_RS19760 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JYK05_RS19770 PF00171 Aldehyde dehydrogenase family JYK05_RS19780 PF08361 MAATS-type transcriptional repressor, C-terminal region JYK05_RS19780 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS19785 PF08359 YsiA-like protein, C-terminal region JYK05_RS19785 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS19795 PF00005 ABC transporter JYK05_RS19805 PF02321 Outer membrane efflux protein JYK05_RS19815 PF00135 Carboxylesterase family JYK05_RS19820 PF07519 Tannase and feruloyl esterase JYK05_RS19845 PF00296 Luciferase-like monooxygenase JYK05_RS19855 PF09084 NMT1/THI5 like JYK05_RS19860 PF00005 ABC transporter JYK05_RS19865 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS19870 PF08546 Ketopantoate reductase PanE/ApbA C terminal JYK05_RS19870 PF02558 Ketopantoate reductase PanE/ApbA JYK05_RS19880 PF03466 LysR substrate binding domain JYK05_RS19880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS19885 PF07690 Major Facilitator Superfamily JYK05_RS19890 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JYK05_RS19900 PF01070 FMN-dependent dehydrogenase JYK05_RS19905 PF07690 Major Facilitator Superfamily JYK05_RS19910 PF03737 Aldolase/RraA JYK05_RS19915 PF13609 Gram-negative porin JYK05_RS19920 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS19920 PF07729 FCD domain JYK05_RS19925 PF03466 LysR substrate binding domain JYK05_RS19925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS19930 PF07690 Major Facilitator Superfamily JYK05_RS19960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK05_RS19960 PF00005 ABC transporter JYK05_RS19965 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS19965 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK05_RS19970 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS19980 PF13609 Gram-negative porin JYK05_RS19985 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK05_RS19995 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS20000 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS20005 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS20010 PF00005 ABC transporter JYK05_RS20025 PF01022 Bacterial regulatory protein, arsR family JYK05_RS20030 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYK05_RS20035 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS20040 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS20045 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS20050 PF00005 ABC transporter JYK05_RS20060 PF01425 Amidase JYK05_RS20080 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS20080 PF01799 [2Fe-2S] binding domain JYK05_RS20085 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK05_RS20085 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK05_RS20090 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK05_RS20090 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK05_RS20095 PF01979 Amidohydrolase family JYK05_RS20100 PF01047 MarR family JYK05_RS20105 PF00563 EAL domain JYK05_RS20105 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS20105 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS20110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS20110 PF00672 HAMP domain JYK05_RS20110 PF02203 Tar ligand binding domain homologue JYK05_RS20115 PF07690 Major Facilitator Superfamily JYK05_RS20120 PF09084 NMT1/THI5 like JYK05_RS20125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK05_RS20125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK05_RS20130 PF00355 Rieske [2Fe-2S] domain JYK05_RS20135 PF00970 Oxidoreductase FAD-binding domain JYK05_RS20135 PF00175 Oxidoreductase NAD-binding domain JYK05_RS20135 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS20140 PF07690 Major Facilitator Superfamily JYK05_RS20150 PF01494 FAD binding domain JYK05_RS20150 PF07976 Phenol hydroxylase, C-terminal dimerisation domain JYK05_RS20160 PF13309 HTH domain JYK05_RS20160 PF08348 YheO-like PAS domain JYK05_RS20165 PF02423 Ornithine cyclodeaminase/mu-crystallin family JYK05_RS20170 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS20175 PF01266 FAD dependent oxidoreductase JYK05_RS20180 PF00795 Carbon-nitrogen hydrolase JYK05_RS20180 PF02540 NAD synthase JYK05_RS20190 PF07690 Major Facilitator Superfamily JYK05_RS20200 PF07729 FCD domain JYK05_RS20200 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS20205 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS20205 PF00175 Oxidoreductase NAD-binding domain JYK05_RS20210 PF00355 Rieske [2Fe-2S] domain JYK05_RS20230 PF04909 Amidohydrolase JYK05_RS20235 PF07690 Major Facilitator Superfamily JYK05_RS20245 PF07690 Major Facilitator Superfamily JYK05_RS20255 PF13609 Gram-negative porin JYK05_RS20260 PF07690 Major Facilitator Superfamily JYK05_RS20265 PF08450 SMP-30/Gluconolactonase/LRE-like region JYK05_RS20270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYK05_RS20270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK05_RS20275 PF03737 Aldolase/RraA JYK05_RS20280 PF01614 Bacterial transcriptional regulator JYK05_RS20280 PF09339 IclR helix-turn-helix domain JYK05_RS20290 PF01070 FMN-dependent dehydrogenase JYK05_RS20300 PF07690 Major Facilitator Superfamily JYK05_RS20300 PF00083 Sugar (and other) transporter JYK05_RS20305 PF01220 Dehydroquinase class II JYK05_RS20310 PF03466 LysR substrate binding domain JYK05_RS20310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS20315 PF00375 Sodium:dicarboxylate symporter family JYK05_RS20325 PF07690 Major Facilitator Superfamily JYK05_RS20330 PF02629 CoA binding domain JYK05_RS20330 PF00549 CoA-ligase JYK05_RS20340 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS20345 PF07690 Major Facilitator Superfamily JYK05_RS20350 PF00005 ABC transporter JYK05_RS20350 PF08402 TOBE domain JYK05_RS20370 PF01425 Amidase JYK05_RS20385 PF13458 Periplasmic binding protein JYK05_RS20395 PF00005 ABC transporter JYK05_RS20400 PF00005 ABC transporter JYK05_RS20405 PF11862 Domain of unknown function (DUF3382) JYK05_RS20405 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS20410 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS20415 PF13458 Periplasmic binding protein JYK05_RS20420 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS20420 PF07729 FCD domain JYK05_RS20430 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS20435 PF11862 Domain of unknown function (DUF3382) JYK05_RS20435 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS20440 PF00005 ABC transporter JYK05_RS20440 PF12399 Branched-chain amino acid ATP-binding cassette transporter JYK05_RS20445 PF00005 ABC transporter JYK05_RS20450 PF07687 Peptidase dimerisation domain JYK05_RS20450 PF01546 Peptidase family M20/M25/M40 JYK05_RS20455 PF07364 Metallopeptidase family M81 JYK05_RS20455 PF07171 MlrC C-terminus JYK05_RS20460 PF13419 Haloacid dehalogenase-like hydrolase JYK05_RS20475 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS20480 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS20485 PF00005 ABC transporter JYK05_RS20490 PF13407 Periplasmic binding protein domain JYK05_RS20495 PF01590 GAF domain JYK05_RS20495 PF02954 Bacterial regulatory protein, Fis family JYK05_RS20495 PF00158 Sigma-54 interaction domain JYK05_RS20500 PF08042 PqqA family JYK05_RS20505 PF01011 PQQ enzyme repeat JYK05_RS20505 PF13360 PQQ-like domain JYK05_RS20515 PF00171 Aldehyde dehydrogenase family JYK05_RS20520 PF01979 Amidohydrolase family JYK05_RS20525 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JYK05_RS20530 PF01180 Dihydroorotate dehydrogenase JYK05_RS20535 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS20535 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JYK05_RS20540 PF07687 Peptidase dimerisation domain JYK05_RS20540 PF01546 Peptidase family M20/M25/M40 JYK05_RS20545 PF08362 YcdC-like protein, C-terminal region JYK05_RS20545 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS20550 PF10503 Esterase PHB depolymerase JYK05_RS20575 PF08402 TOBE domain JYK05_RS20575 PF00005 ABC transporter JYK05_RS20590 PF00289 Biotin carboxylase, N-terminal domain JYK05_RS20590 PF00364 Biotin-requiring enzyme JYK05_RS20590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JYK05_RS20590 PF02785 Biotin carboxylase C-terminal domain JYK05_RS20590 PF18140 Propionyl-coenzyme A carboxylase BT domain JYK05_RS20595 PF01425 Amidase JYK05_RS20600 PF12833 Helix-turn-helix domain JYK05_RS20600 PF02311 AraC-like ligand binding domain JYK05_RS20610 PF08241 Methyltransferase domain JYK05_RS20625 PF00561 alpha/beta hydrolase fold JYK05_RS20630 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK05_RS20630 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK05_RS20635 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK05_RS20635 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK05_RS20640 PF01799 [2Fe-2S] binding domain JYK05_RS20640 PF10518 TAT (twin-arginine translocation) pathway signal sequence JYK05_RS20640 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS20645 PF00180 Isocitrate/isopropylmalate dehydrogenase JYK05_RS20650 PF13229 Right handed beta helix region JYK05_RS20650 PF12708 Pectate lyase superfamily protein JYK05_RS20650 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JYK05_RS20660 PF00701 Dihydrodipicolinate synthetase family JYK05_RS20665 PF17806 Sarcosine oxidase A3 domain JYK05_RS20665 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS20675 PF01266 FAD dependent oxidoreductase JYK05_RS20675 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JYK05_RS20680 PF05544 Proline racemase JYK05_RS20685 PF13458 Periplasmic binding protein JYK05_RS20690 PF02734 DAK2 domain JYK05_RS20690 PF02733 Dak1 domain JYK05_RS20695 PF01323 DSBA-like thioredoxin domain JYK05_RS20705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS20705 PF00672 HAMP domain JYK05_RS20705 PF02203 Tar ligand binding domain homologue JYK05_RS20735 PF01546 Peptidase family M20/M25/M40 JYK05_RS20735 PF07687 Peptidase dimerisation domain JYK05_RS20745 PF01042 Endoribonuclease L-PSP JYK05_RS20755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS20755 PF03466 LysR substrate binding domain JYK05_RS20760 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYK05_RS20760 PF00355 Rieske [2Fe-2S] domain JYK05_RS20765 PF08402 TOBE domain JYK05_RS20765 PF00005 ABC transporter JYK05_RS20775 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS20790 PF00356 Bacterial regulatory proteins, lacI family JYK05_RS20800 PF00106 short chain dehydrogenase JYK05_RS20805 PF12833 Helix-turn-helix domain JYK05_RS20805 PF06719 AraC-type transcriptional regulator N-terminus JYK05_RS20815 PF00174 Oxidoreductase molybdopterin binding domain JYK05_RS20820 PF00106 short chain dehydrogenase JYK05_RS20825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JYK05_RS20825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JYK05_RS20830 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS20835 PF00005 ABC transporter JYK05_RS20845 PF13407 Periplasmic binding protein domain JYK05_RS20855 PF02779 Transketolase, pyrimidine binding domain JYK05_RS20855 PF02780 Transketolase, C-terminal domain JYK05_RS20860 PF00456 Transketolase, thiamine diphosphate binding domain JYK05_RS20865 PF08220 DeoR-like helix-turn-helix domain JYK05_RS20865 PF00455 DeoR C terminal sensor domain JYK05_RS20870 PF13407 Periplasmic binding protein domain JYK05_RS20875 PF08450 SMP-30/Gluconolactonase/LRE-like region JYK05_RS20880 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS20885 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS20890 PF00005 ABC transporter JYK05_RS20895 PF13407 Periplasmic binding protein domain JYK05_RS20910 PF00384 Molybdopterin oxidoreductase JYK05_RS20915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS20915 PF08269 Cache domain JYK05_RS20920 PF00535 Glycosyl transferase family 2 JYK05_RS20930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS20930 PF03466 LysR substrate binding domain JYK05_RS20940 PF01434 Peptidase family M41 JYK05_RS20940 PF06480 FtsH Extracellular JYK05_RS20940 PF17862 AAA+ lid domain JYK05_RS20940 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS20945 PF02447 GntP family permease JYK05_RS20955 PF07690 Major Facilitator Superfamily JYK05_RS20960 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS20960 PF07702 UTRA domain JYK05_RS20965 PF13419 Haloacid dehalogenase-like hydrolase JYK05_RS20985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS20985 PF16591 Helical bimodular sensor domain JYK05_RS20985 PF00672 HAMP domain JYK05_RS20990 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS20990 PF00989 PAS fold JYK05_RS20990 PF16736 Single Cache-like JYK05_RS20990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS21010 PF04185 Phosphoesterase family JYK05_RS21010 PF05506 Domain of unknown function (DUF756) JYK05_RS21015 PF07690 Major Facilitator Superfamily JYK05_RS21020 PF12706 Beta-lactamase superfamily domain JYK05_RS21035 PF01965 DJ-1/PfpI family JYK05_RS21035 PF12833 Helix-turn-helix domain JYK05_RS21050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS21050 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS21050 PF00672 HAMP domain JYK05_RS21055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK05_RS21055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK05_RS21060 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK05_RS21060 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK05_RS21065 PF05853 beta-keto acid cleavage enzyme JYK05_RS21070 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JYK05_RS21075 PF01965 DJ-1/PfpI family JYK05_RS21075 PF12833 Helix-turn-helix domain JYK05_RS21080 PF13609 Gram-negative porin JYK05_RS21090 PF00884 Sulfatase JYK05_RS21090 PF12411 Choline sulfatase enzyme C terminal JYK05_RS21095 PF03466 LysR substrate binding domain JYK05_RS21095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS21100 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS21100 PF13977 BetI-type transcriptional repressor, C-terminal JYK05_RS21105 PF00171 Aldehyde dehydrogenase family JYK05_RS21110 PF00732 GMC oxidoreductase JYK05_RS21110 PF05199 GMC oxidoreductase JYK05_RS21115 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JYK05_RS21120 PF00893 Small Multidrug Resistance protein JYK05_RS21125 PF01292 Prokaryotic cytochrome b561 JYK05_RS21140 PF00034 Cytochrome c JYK05_RS21145 PF13360 PQQ-like domain JYK05_RS21145 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS21160 PF00205 Thiamine pyrophosphate enzyme, central domain JYK05_RS21160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK05_RS21160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK05_RS21165 PF13378 Enolase C-terminal domain-like JYK05_RS21165 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYK05_RS21180 PF00732 GMC oxidoreductase JYK05_RS21180 PF05199 GMC oxidoreductase JYK05_RS21190 PF00384 Molybdopterin oxidoreductase JYK05_RS21195 PF00034 Cytochrome c JYK05_RS21195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS21205 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYK05_RS21210 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JYK05_RS21210 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JYK05_RS21225 PF00106 short chain dehydrogenase JYK05_RS21230 PF00723 Glycosyl hydrolases family 15 JYK05_RS21235 PF07732 Multicopper oxidase JYK05_RS21235 PF07731 Multicopper oxidase JYK05_RS21235 PF00394 Multicopper oxidase JYK05_RS21240 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS21245 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS21250 PF00005 ABC transporter JYK05_RS21260 PF01979 Amidohydrolase family JYK05_RS21265 PF00561 alpha/beta hydrolase fold JYK05_RS21270 PF01557 Fumarylacetoacetate (FAA) hydrolase family JYK05_RS21285 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS21290 PF00005 ABC transporter JYK05_RS21295 PF07519 Tannase and feruloyl esterase JYK05_RS21315 PF03466 LysR substrate binding domain JYK05_RS21315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS21330 PF04107 Glutamate-cysteine ligase family 2(GCS2) JYK05_RS21340 PF00034 Cytochrome c JYK05_RS21340 PF14376 Haem-binding domain JYK05_RS21340 PF03150 Di-haem cytochrome c peroxidase JYK05_RS21345 PF04185 Phosphoesterase family JYK05_RS21350 PF05230 MASE2 domain JYK05_RS21350 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS21365 PF00698 Acyl transferase domain JYK05_RS21365 PF00107 Zinc-binding dehydrogenase JYK05_RS21365 PF16197 Ketoacyl-synthetase C-terminal extension JYK05_RS21365 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK05_RS21365 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK05_RS21365 PF08659 KR domain JYK05_RS21365 PF00550 Phosphopantetheine attachment site JYK05_RS21365 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS21365 PF14765 Polyketide synthase dehydratase JYK05_RS21370 PF00248 Aldo/keto reductase family JYK05_RS21375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS21375 PF03466 LysR substrate binding domain JYK05_RS21385 PF06628 Catalase-related immune-responsive JYK05_RS21385 PF00199 Catalase JYK05_RS21390 PF06942 GlpM protein JYK05_RS21395 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS21395 PF07694 5TMR of 5TMR-LYT JYK05_RS21400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS21400 PF03466 LysR substrate binding domain JYK05_RS21410 PF07690 Major Facilitator Superfamily JYK05_RS21410 PF00083 Sugar (and other) transporter JYK05_RS21415 PF00732 GMC oxidoreductase JYK05_RS21415 PF05199 GMC oxidoreductase JYK05_RS21420 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK05_RS21420 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK05_RS21420 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS21425 PF00501 AMP-binding enzyme JYK05_RS21425 PF13193 AMP-binding enzyme C-terminal domain JYK05_RS21430 PF01799 [2Fe-2S] binding domain JYK05_RS21430 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS21435 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK05_RS21435 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK05_RS21440 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK05_RS21440 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK05_RS21445 PF02441 Flavoprotein JYK05_RS21450 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JYK05_RS21455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS21455 PF03466 LysR substrate binding domain JYK05_RS21460 PF00171 Aldehyde dehydrogenase family JYK05_RS21470 PF05230 MASE2 domain JYK05_RS21470 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS21475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JYK05_RS21475 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JYK05_RS21480 PF01070 FMN-dependent dehydrogenase JYK05_RS21485 PF07690 Major Facilitator Superfamily JYK05_RS21490 PF00701 Dihydrodipicolinate synthetase family JYK05_RS21495 PF08666 SAF domain JYK05_RS21495 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JYK05_RS21500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS21500 PF03466 LysR substrate binding domain JYK05_RS21510 PF02566 OsmC-like protein JYK05_RS21525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS21525 PF03466 LysR substrate binding domain JYK05_RS21530 PF01047 MarR family JYK05_RS21535 PF00885 6,7-dimethyl-8-ribityllumazine synthase JYK05_RS21540 PF01219 Prokaryotic diacylglycerol kinase JYK05_RS21545 PF00301 Rubredoxin JYK05_RS21550 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS21580 PF03466 LysR substrate binding domain JYK05_RS21580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS21585 PF05506 Domain of unknown function (DUF756) JYK05_RS21585 PF04185 Phosphoesterase family JYK05_RS21595 PF04239 Protein of unknown function (DUF421) JYK05_RS21600 PF04239 Protein of unknown function (DUF421) JYK05_RS21620 PF00072 Response regulator receiver domain JYK05_RS21620 PF13426 PAS domain JYK05_RS21620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS21625 PF00011 Hsp20/alpha crystallin family JYK05_RS21650 PF00313 'Cold-shock' DNA-binding domain JYK05_RS21660 PF00563 EAL domain JYK05_RS21660 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS21660 PF08448 PAS fold JYK05_RS21670 PF03922 OmpW family JYK05_RS21685 PF12146 Serine aminopeptidase, S33 JYK05_RS21690 PF00753 Metallo-beta-lactamase superfamily JYK05_RS21725 PF02308 MgtC family JYK05_RS21735 PF00106 short chain dehydrogenase JYK05_RS21740 PF03466 LysR substrate binding domain JYK05_RS21740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS21745 PF01266 FAD dependent oxidoreductase JYK05_RS21755 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS21755 PF04324 BFD-like [2Fe-2S] binding domain JYK05_RS21760 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS21765 PF00293 NUDIX domain JYK05_RS21770 PF01266 FAD dependent oxidoreductase JYK05_RS21770 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JYK05_RS21785 PF05974 Domain of unknown function (DUF892) JYK05_RS21790 PF05067 Manganese containing catalase JYK05_RS21795 PF04070 Domain of unknown function (DUF378) JYK05_RS21800 PF02666 Phosphatidylserine decarboxylase JYK05_RS21820 PF05974 Domain of unknown function (DUF892) JYK05_RS21825 PF02540 NAD synthase JYK05_RS21830 PF02464 Competence-damaged protein JYK05_RS21840 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYK05_RS21860 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS21860 PF00034 Cytochrome c JYK05_RS21865 PF00534 Glycosyl transferases group 1 JYK05_RS21865 PF13439 Glycosyltransferase Family 4 JYK05_RS21870 PF01156 Inosine-uridine preferring nucleoside hydrolase JYK05_RS21875 PF03788 LrgA family JYK05_RS21880 PF04172 LrgB-like family JYK05_RS21890 PF01566 Natural resistance-associated macrophage protein JYK05_RS21905 PF00561 alpha/beta hydrolase fold JYK05_RS21920 PF00534 Glycosyl transferases group 1 JYK05_RS21920 PF13439 Glycosyltransferase Family 4 JYK05_RS21925 PF13439 Glycosyltransferase Family 4 JYK05_RS21925 PF00534 Glycosyl transferases group 1 JYK05_RS21935 PF01011 PQQ enzyme repeat JYK05_RS21940 PF03631 Virulence factor BrkB JYK05_RS21970 PF13614 AAA domain JYK05_RS21975 PF02195 ParB-like nuclease domain JYK05_RS21975 PF17762 HTH domain found in ParB protein JYK05_RS21990 PF07690 Major Facilitator Superfamily JYK05_RS21995 PF01546 Peptidase family M20/M25/M40 JYK05_RS21995 PF07687 Peptidase dimerisation domain JYK05_RS22000 PF03466 LysR substrate binding domain JYK05_RS22000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS22005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK05_RS22005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK05_RS22015 PF00593 TonB dependent receptor JYK05_RS22015 PF07715 TonB-dependent Receptor Plug Domain JYK05_RS22020 PF01037 Lrp/AsnC ligand binding domain JYK05_RS22025 PF00291 Pyridoxal-phosphate dependent enzyme JYK05_RS22035 PF00764 Arginosuccinate synthase JYK05_RS22045 PF00171 Aldehyde dehydrogenase family JYK05_RS22060 PF01066 CDP-alcohol phosphatidyltransferase JYK05_RS22065 PF00535 Glycosyl transferase family 2 JYK05_RS22075 PF06250 YhcG PDDEXK nuclease domain JYK05_RS22075 PF17761 DUF1016 N-terminal domain JYK05_RS22080 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS22080 PF08448 PAS fold JYK05_RS22080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS22080 PF13188 PAS domain JYK05_RS22080 PF00072 Response regulator receiver domain JYK05_RS22085 PF18073 Rubredoxin metal binding domain JYK05_RS22095 PF00920 Dehydratase family JYK05_RS22100 PF01235 Sodium:alanine symporter family JYK05_RS22115 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS22115 PF00072 Response regulator receiver domain JYK05_RS22115 PF01627 Hpt domain JYK05_RS22115 PF00989 PAS fold JYK05_RS22115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS22115 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS22120 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS22120 PF00360 Phytochrome region JYK05_RS22120 PF01590 GAF domain JYK05_RS22120 PF00563 EAL domain JYK05_RS22150 PF05247 Flagellar transcriptional activator (FlhD) JYK05_RS22155 PF05280 Flagellar transcriptional activator (FlhC) JYK05_RS22160 PF02203 Tar ligand binding domain homologue JYK05_RS22160 PF00672 HAMP domain JYK05_RS22160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS22170 PF00072 Response regulator receiver domain JYK05_RS22180 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS22180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS22180 PF00672 HAMP domain JYK05_RS22185 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS22185 PF00072 Response regulator receiver domain JYK05_RS22200 PF03958 Bacterial type II/III secretion system short domain JYK05_RS22200 PF00263 Bacterial type II and III secretion system protein JYK05_RS22205 PF07690 Major Facilitator Superfamily JYK05_RS22210 PF03466 LysR substrate binding domain JYK05_RS22210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS22215 PF13378 Enolase C-terminal domain-like JYK05_RS22215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYK05_RS22220 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JYK05_RS22225 PF07690 Major Facilitator Superfamily JYK05_RS22235 PF03466 LysR substrate binding domain JYK05_RS22235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS22240 PF13609 Gram-negative porin JYK05_RS22245 PF07519 Tannase and feruloyl esterase JYK05_RS22260 PF02706 Chain length determinant protein JYK05_RS22260 PF13807 G-rich domain on putative tyrosine kinase JYK05_RS22260 PF13614 AAA domain JYK05_RS22280 PF02706 Chain length determinant protein JYK05_RS22280 PF13614 AAA domain JYK05_RS22280 PF13807 G-rich domain on putative tyrosine kinase JYK05_RS22285 PF00534 Glycosyl transferases group 1 JYK05_RS22285 PF13439 Glycosyltransferase Family 4 JYK05_RS22305 PF13439 Glycosyltransferase Family 4 JYK05_RS22305 PF00534 Glycosyl transferases group 1 JYK05_RS22335 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JYK05_RS22345 PF00149 Calcineurin-like phosphoesterase JYK05_RS22345 PF16656 Purple acid Phosphatase, N-terminal domain JYK05_RS22365 PF13378 Enolase C-terminal domain-like JYK05_RS22365 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYK05_RS22375 PF00005 ABC transporter JYK05_RS22380 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS22395 PF03466 LysR substrate binding domain JYK05_RS22400 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JYK05_RS22410 PF00890 FAD binding domain JYK05_RS22410 PF02910 Fumarate reductase flavoprotein C-term JYK05_RS22415 PF13085 2Fe-2S iron-sulfur cluster binding domain JYK05_RS22420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS22420 PF03466 LysR substrate binding domain JYK05_RS22425 PF12833 Helix-turn-helix domain JYK05_RS22425 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JYK05_RS22430 PF05853 beta-keto acid cleavage enzyme JYK05_RS22435 PF07690 Major Facilitator Superfamily JYK05_RS22450 PF17991 Thioredoxin like C-terminal domain JYK05_RS22450 PF02683 Cytochrome C biogenesis protein transmembrane region JYK05_RS22450 PF00578 AhpC/TSA family JYK05_RS22460 PF00578 AhpC/TSA family JYK05_RS22460 PF02683 Cytochrome C biogenesis protein transmembrane region JYK05_RS22460 PF17991 Thioredoxin like C-terminal domain JYK05_RS22470 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS22470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS22470 PF00672 HAMP domain JYK05_RS22475 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS22475 PF00072 Response regulator receiver domain JYK05_RS22490 PF02566 OsmC-like protein JYK05_RS22500 PF06779 Uncharacterised MFS-type transporter YbfB JYK05_RS22505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS22505 PF03466 LysR substrate binding domain JYK05_RS22510 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS22530 PF00916 Sulfate permease family JYK05_RS22530 PF01740 STAS domain JYK05_RS22555 PF00072 Response regulator receiver domain JYK05_RS22555 PF01339 CheB methylesterase JYK05_RS22565 PF00593 TonB dependent receptor JYK05_RS22565 PF07715 TonB-dependent Receptor Plug Domain JYK05_RS22575 PF00563 EAL domain JYK05_RS22575 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS22575 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS22580 PF02627 Carboxymuconolactone decarboxylase family JYK05_RS22590 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS22590 PF00155 Aminotransferase class I and II JYK05_RS22600 PF08448 PAS fold JYK05_RS22600 PF03705 CheR methyltransferase, all-alpha domain JYK05_RS22600 PF01739 CheR methyltransferase, SAM binding domain JYK05_RS22600 PF01339 CheB methylesterase JYK05_RS22605 PF01339 CheB methylesterase JYK05_RS22605 PF00072 Response regulator receiver domain JYK05_RS22610 PF13091 PLD-like domain JYK05_RS22645 PF01613 Flavin reductase like domain JYK05_RS22655 PF01425 Amidase JYK05_RS22670 PF01361 Tautomerase enzyme JYK05_RS22680 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JYK05_RS22680 PF00355 Rieske [2Fe-2S] domain JYK05_RS22685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS22685 PF03466 LysR substrate binding domain JYK05_RS22690 PF00355 Rieske [2Fe-2S] domain JYK05_RS22690 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS22695 PF00083 Sugar (and other) transporter JYK05_RS22700 PF03466 LysR substrate binding domain JYK05_RS22700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS22710 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS22715 PF00083 Sugar (and other) transporter JYK05_RS22720 PF13609 Gram-negative porin JYK05_RS22725 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JYK05_RS22725 PF13378 Enolase C-terminal domain-like JYK05_RS22730 PF02426 Muconolactone delta-isomerase JYK05_RS22735 PF04444 Catechol dioxygenase N terminus JYK05_RS22735 PF00775 Dioxygenase JYK05_RS22740 PF00158 Sigma-54 interaction domain JYK05_RS22740 PF01590 GAF domain JYK05_RS22740 PF02954 Bacterial regulatory protein, Fis family JYK05_RS22745 PF01513 ATP-NAD kinase JYK05_RS22750 PF00676 Dehydrogenase E1 component JYK05_RS22755 PF02780 Transketolase, C-terminal domain JYK05_RS22755 PF02779 Transketolase, pyrimidine binding domain JYK05_RS22760 PF00364 Biotin-requiring enzyme JYK05_RS22760 PF00561 alpha/beta hydrolase fold JYK05_RS22770 PF02627 Carboxymuconolactone decarboxylase family JYK05_RS22775 PF05368 NmrA-like family JYK05_RS22780 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS22780 PF00155 Aminotransferase class I and II JYK05_RS22800 PF00501 AMP-binding enzyme JYK05_RS22800 PF13193 AMP-binding enzyme C-terminal domain JYK05_RS22810 PF08447 PAS fold JYK05_RS22810 PF08448 PAS fold JYK05_RS22810 PF13426 PAS domain JYK05_RS22810 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS22810 PF00563 EAL domain JYK05_RS22810 PF05231 MASE1 JYK05_RS22815 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS22815 PF08447 PAS fold JYK05_RS22815 PF08448 PAS fold JYK05_RS22815 PF00563 EAL domain JYK05_RS22830 PF08447 PAS fold JYK05_RS22830 PF13426 PAS domain JYK05_RS22830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS22840 PF01546 Peptidase family M20/M25/M40 JYK05_RS22845 PF04909 Amidohydrolase JYK05_RS22850 PF01842 ACT domain JYK05_RS22850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK05_RS22850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYK05_RS22855 PF00356 Bacterial regulatory proteins, lacI family JYK05_RS22860 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JYK05_RS22865 PF03480 Bacterial extracellular solute-binding protein, family 7 JYK05_RS22885 PF00753 Metallo-beta-lactamase superfamily JYK05_RS22895 PF00005 ABC transporter JYK05_RS22900 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS22905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JYK05_RS22905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JYK05_RS22910 PF08450 SMP-30/Gluconolactonase/LRE-like region JYK05_RS22915 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS22920 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS22930 PF00005 ABC transporter JYK05_RS22940 PF13545 Crp-like helix-turn-helix domain JYK05_RS22940 PF00027 Cyclic nucleotide-binding domain JYK05_RS22945 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS22945 PF07702 UTRA domain JYK05_RS22950 PF01636 Phosphotransferase enzyme family JYK05_RS22955 PF01008 Initiation factor 2 subunit family JYK05_RS22960 PF00596 Class II Aldolase and Adducin N-terminal domain JYK05_RS22965 PF13407 Periplasmic binding protein domain JYK05_RS22970 PF00005 ABC transporter JYK05_RS22975 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS22980 PF02733 Dak1 domain JYK05_RS22985 PF02734 DAK2 domain JYK05_RS22995 PF02558 Ketopantoate reductase PanE/ApbA JYK05_RS22995 PF08546 Ketopantoate reductase PanE/ApbA C terminal JYK05_RS23000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JYK05_RS23005 PF01575 MaoC like domain JYK05_RS23010 PF02515 CoA-transferase family III JYK05_RS23015 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JYK05_RS23015 PF08501 Shikimate dehydrogenase substrate binding domain JYK05_RS23015 PF01488 Shikimate / quinate 5-dehydrogenase JYK05_RS23020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK05_RS23020 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JYK05_RS23025 PF01220 Dehydroquinase class II JYK05_RS23030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS23030 PF03466 LysR substrate binding domain JYK05_RS23035 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JYK05_RS23035 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JYK05_RS23040 PF04632 Fusaric acid resistance protein family JYK05_RS23045 PF03466 LysR substrate binding domain JYK05_RS23045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS23055 PF07350 Protein of unknown function (DUF1479) JYK05_RS23060 PF01547 Bacterial extracellular solute-binding protein JYK05_RS23065 PF00248 Aldo/keto reductase family JYK05_RS23070 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS23075 PF07690 Major Facilitator Superfamily JYK05_RS23080 PF03466 LysR substrate binding domain JYK05_RS23080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS23085 PF00698 Acyl transferase domain JYK05_RS23085 PF08659 KR domain JYK05_RS23085 PF00107 Zinc-binding dehydrogenase JYK05_RS23085 PF16197 Ketoacyl-synthetase C-terminal extension JYK05_RS23085 PF00109 Beta-ketoacyl synthase, N-terminal domain JYK05_RS23085 PF02801 Beta-ketoacyl synthase, C-terminal domain JYK05_RS23085 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS23085 PF00550 Phosphopantetheine attachment site JYK05_RS23085 PF14765 Polyketide synthase dehydratase JYK05_RS23100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS23105 PF00158 Sigma-54 interaction domain JYK05_RS23105 PF00072 Response regulator receiver domain JYK05_RS23105 PF02954 Bacterial regulatory protein, Fis family JYK05_RS23125 PF07690 Major Facilitator Superfamily JYK05_RS23130 PF02040 Arsenical pump membrane protein JYK05_RS23140 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS23140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS23140 PF01627 Hpt domain JYK05_RS23140 PF00989 PAS fold JYK05_RS23140 PF00072 Response regulator receiver domain JYK05_RS23140 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS23155 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS23155 PF13823 Alcohol dehydrogenase GroES-associated JYK05_RS23155 PF00107 Zinc-binding dehydrogenase JYK05_RS23165 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS23165 PF13823 Alcohol dehydrogenase GroES-associated JYK05_RS23165 PF00107 Zinc-binding dehydrogenase JYK05_RS23175 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS23180 PF00005 ABC transporter JYK05_RS23185 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JYK05_RS23200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS23200 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS23210 PF00072 Response regulator receiver domain JYK05_RS23210 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS23220 PF08239 Bacterial SH3 domain JYK05_RS23220 PF00069 Protein kinase domain JYK05_RS23230 PF06761 Intracellular multiplication and human macrophage-killing JYK05_RS23230 PF06744 Type VI secretion protein IcmF C-terminal JYK05_RS23230 PF14331 ImcF-related N-terminal domain JYK05_RS23235 PF13677 Membrane MotB of proton-channel complex MotA/MotB JYK05_RS23235 PF00691 OmpA family JYK05_RS23240 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JYK05_RS23265 PF06812 ImpA, N-terminal, type VI secretion system JYK05_RS23270 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 JYK05_RS23275 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JYK05_RS23290 PF17871 AAA lid domain JYK05_RS23290 PF00004 ATPase family associated with various cellular activities (AAA) JYK05_RS23290 PF10431 C-terminal, D2-small domain, of ClpB protein JYK05_RS23290 PF07724 AAA domain (Cdc48 subfamily) JYK05_RS23300 PF05947 Type VI secretion system, TssF JYK05_RS23305 PF04965 Gene 25-like lysozyme JYK05_RS23320 PF04717 Type VI secretion system, phage-baseplate injector JYK05_RS23320 PF06715 Gp5 C-terminal repeat (3 copies) JYK05_RS23370 PF00072 Response regulator receiver domain JYK05_RS23370 PF00211 Adenylate and Guanylate cyclase catalytic domain JYK05_RS23375 PF00072 Response regulator receiver domain JYK05_RS23375 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS23415 PF07690 Major Facilitator Superfamily JYK05_RS23420 PF17516 ProQ C-terminal domain JYK05_RS23420 PF04352 ProQ/FINO family JYK05_RS23435 PF04444 Catechol dioxygenase N terminus JYK05_RS23435 PF00775 Dioxygenase JYK05_RS23440 PF00465 Iron-containing alcohol dehydrogenase JYK05_RS23445 PF00171 Aldehyde dehydrogenase family JYK05_RS23460 PF03466 LysR substrate binding domain JYK05_RS23460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS23465 PF07690 Major Facilitator Superfamily JYK05_RS23475 PF00005 ABC transporter JYK05_RS23475 PF17912 MalK OB fold domain JYK05_RS23480 PF17912 MalK OB fold domain JYK05_RS23480 PF00005 ABC transporter JYK05_RS23485 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS23505 PF05506 Domain of unknown function (DUF756) JYK05_RS23505 PF04185 Phosphoesterase family JYK05_RS23515 PF02779 Transketolase, pyrimidine binding domain JYK05_RS23515 PF16078 2-oxoglutarate dehydrogenase N-terminus JYK05_RS23515 PF00676 Dehydrogenase E1 component JYK05_RS23515 PF16870 2-oxoglutarate dehydrogenase C-terminal JYK05_RS23520 PF02203 Tar ligand binding domain homologue JYK05_RS23520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS23520 PF00672 HAMP domain JYK05_RS23530 PF01494 FAD binding domain JYK05_RS23535 PF00083 Sugar (and other) transporter JYK05_RS23550 PF00355 Rieske [2Fe-2S] domain JYK05_RS23560 PF00175 Oxidoreductase NAD-binding domain JYK05_RS23560 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS23565 PF09339 IclR helix-turn-helix domain JYK05_RS23565 PF01614 Bacterial transcriptional regulator JYK05_RS23585 PF12697 Alpha/beta hydrolase family JYK05_RS23590 PF09339 IclR helix-turn-helix domain JYK05_RS23590 PF01614 Bacterial transcriptional regulator JYK05_RS23600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK05_RS23600 PF00205 Thiamine pyrophosphate enzyme, central domain JYK05_RS23600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK05_RS23610 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS23615 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYK05_RS23615 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYK05_RS23615 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYK05_RS23620 PF13807 G-rich domain on putative tyrosine kinase JYK05_RS23620 PF02706 Chain length determinant protein JYK05_RS23620 PF13614 AAA domain JYK05_RS23635 PF06250 YhcG PDDEXK nuclease domain JYK05_RS23635 PF17761 DUF1016 N-terminal domain JYK05_RS23660 PF09278 MerR, DNA binding JYK05_RS23660 PF00376 MerR family regulatory protein JYK05_RS23665 PF01066 CDP-alcohol phosphatidyltransferase JYK05_RS23685 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS23685 PF00563 EAL domain JYK05_RS23685 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS23690 PF00072 Response regulator receiver domain JYK05_RS23690 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS23695 PF00072 Response regulator receiver domain JYK05_RS23695 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS23700 PF05860 haemagglutination activity domain JYK05_RS23705 PF18254 HMW1 domain 2 JYK05_RS23705 PF18071 HMW1C N-terminal JYK05_RS23735 PF00196 Bacterial regulatory proteins, luxR family JYK05_RS23735 PF00072 Response regulator receiver domain JYK05_RS23740 PF00072 Response regulator receiver domain JYK05_RS23740 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS23740 PF09456 RcsC Alpha-Beta-Loop (ABL) JYK05_RS23740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS23745 PF00563 EAL domain JYK05_RS23745 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS23745 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS23750 PF01220 Dehydroquinase class II JYK05_RS23765 PF00324 Amino acid permease JYK05_RS23770 PF00155 Aminotransferase class I and II JYK05_RS23790 PF01011 PQQ enzyme repeat JYK05_RS23805 PF02515 CoA-transferase family III JYK05_RS23810 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JYK05_RS23815 PF17042 Nucleotide-binding C-terminal domain JYK05_RS23815 PF07005 Sugar-binding N-terminal domain JYK05_RS23820 PF03812 2-keto-3-deoxygluconate permease JYK05_RS23825 PF00455 DeoR C terminal sensor domain JYK05_RS23825 PF08220 DeoR-like helix-turn-helix domain JYK05_RS23830 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS23830 PF00072 Response regulator receiver domain JYK05_RS23830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS23830 PF01627 Hpt domain JYK05_RS23830 PF00497 Bacterial extracellular solute-binding proteins, family 3 JYK05_RS23840 PF00465 Iron-containing alcohol dehydrogenase JYK05_RS23855 PF00596 Class II Aldolase and Adducin N-terminal domain JYK05_RS23860 PF01361 Tautomerase enzyme JYK05_RS23865 PF01274 Malate synthase JYK05_RS23870 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK05_RS23870 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JYK05_RS23875 PF00941 FAD binding domain in molybdopterin dehydrogenase JYK05_RS23875 PF03450 CO dehydrogenase flavoprotein C-terminal domain JYK05_RS23880 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS23880 PF10518 TAT (twin-arginine translocation) pathway signal sequence JYK05_RS23880 PF01799 [2Fe-2S] binding domain JYK05_RS23885 PF00881 Nitroreductase family JYK05_RS23890 PF07690 Major Facilitator Superfamily JYK05_RS23895 PF03466 LysR substrate binding domain JYK05_RS23895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS23900 PF07687 Peptidase dimerisation domain JYK05_RS23900 PF01546 Peptidase family M20/M25/M40 JYK05_RS23925 PF07690 Major Facilitator Superfamily JYK05_RS23930 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS23935 PF13193 AMP-binding enzyme C-terminal domain JYK05_RS23935 PF00501 AMP-binding enzyme JYK05_RS23940 PF00043 Glutathione S-transferase, C-terminal domain JYK05_RS23940 PF02798 Glutathione S-transferase, N-terminal domain JYK05_RS23945 PF13417 Glutathione S-transferase, N-terminal domain JYK05_RS23945 PF00043 Glutathione S-transferase, C-terminal domain JYK05_RS23950 PF13458 Periplasmic binding protein JYK05_RS23955 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS23965 PF00005 ABC transporter JYK05_RS23970 PF13609 Gram-negative porin JYK05_RS23995 PF13419 Haloacid dehalogenase-like hydrolase JYK05_RS24000 PF00793 DAHP synthetase I family JYK05_RS24005 PF00563 EAL domain JYK05_RS24005 PF08447 PAS fold JYK05_RS24005 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS24005 PF08448 PAS fold JYK05_RS24010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS24010 PF00072 Response regulator receiver domain JYK05_RS24010 PF13426 PAS domain JYK05_RS24025 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS24030 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS24035 PF00005 ABC transporter JYK05_RS24040 PF13407 Periplasmic binding protein domain JYK05_RS24045 PF00356 Bacterial regulatory proteins, lacI family JYK05_RS24085 PF03167 Uracil DNA glycosylase superfamily JYK05_RS24090 PF00106 short chain dehydrogenase JYK05_RS24100 PF13091 PLD-like domain JYK05_RS24100 PF13396 Phospholipase_D-nuclease N-terminal JYK05_RS24105 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS24105 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS24105 PF00563 EAL domain JYK05_RS24120 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS24120 PF00563 EAL domain JYK05_RS24120 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS24125 PF00005 ABC transporter JYK05_RS24125 PF17912 MalK OB fold domain JYK05_RS24135 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS24140 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS24145 PF04198 Putative sugar-binding domain JYK05_RS24155 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS24155 PF00107 Zinc-binding dehydrogenase JYK05_RS24160 PF00107 Zinc-binding dehydrogenase JYK05_RS24160 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS24170 PF00111 2Fe-2S iron-sulfur cluster binding domain JYK05_RS24170 PF01799 [2Fe-2S] binding domain JYK05_RS24175 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JYK05_RS24180 PF00034 Cytochrome c JYK05_RS24180 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JYK05_RS24195 PF01425 Amidase JYK05_RS24200 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JYK05_RS24200 PF01266 FAD dependent oxidoreductase JYK05_RS24205 PF04337 Protein of unknown function, DUF480 JYK05_RS24210 PF14403 Circularly permuted ATP-grasp type 2 JYK05_RS24220 PF10005 zinc-ribbon domain JYK05_RS24220 PF15887 Putative zinc-binding metallo-peptidase JYK05_RS24230 PF14403 Circularly permuted ATP-grasp type 2 JYK05_RS24230 PF04168 A predicted alpha-helical domain with a conserved ER motif. JYK05_RS24235 PF01841 Transglutaminase-like superfamily JYK05_RS24235 PF08379 Bacterial transglutaminase-like N-terminal region JYK05_RS24255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS24255 PF02203 Tar ligand binding domain homologue JYK05_RS24255 PF00672 HAMP domain JYK05_RS24265 PF00264 Common central domain of tyrosinase JYK05_RS24270 PF00205 Thiamine pyrophosphate enzyme, central domain JYK05_RS24270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JYK05_RS24270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JYK05_RS24280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS24280 PF13426 PAS domain JYK05_RS24280 PF00072 Response regulator receiver domain JYK05_RS24285 PF00596 Class II Aldolase and Adducin N-terminal domain JYK05_RS24290 PF17042 Nucleotide-binding C-terminal domain JYK05_RS24290 PF07005 Sugar-binding N-terminal domain JYK05_RS24310 PF07995 Glucose / Sorbosone dehydrogenase JYK05_RS24325 PF03466 LysR substrate binding domain JYK05_RS24325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS24365 PF00072 Response regulator receiver domain JYK05_RS24375 PF08448 PAS fold JYK05_RS24375 PF03705 CheR methyltransferase, all-alpha domain JYK05_RS24375 PF01739 CheR methyltransferase, SAM binding domain JYK05_RS24375 PF01339 CheB methylesterase JYK05_RS24390 PF03797 Autotransporter beta-domain JYK05_RS24405 PF00264 Common central domain of tyrosinase JYK05_RS24420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JYK05_RS24420 PF02770 Acyl-CoA dehydrogenase, middle domain JYK05_RS24420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JYK05_RS24420 PF12806 Acetyl-CoA dehydrogenase C-terminal like JYK05_RS24425 PF00884 Sulfatase JYK05_RS24430 PF03781 Sulfatase-modifying factor enzyme 1 JYK05_RS24440 PF00501 AMP-binding enzyme JYK05_RS24445 PF00561 alpha/beta hydrolase fold JYK05_RS24465 PF01594 AI-2E family transporter JYK05_RS24475 PF00871 Acetokinase family JYK05_RS24480 PF01515 Phosphate acetyl/butaryl transferase JYK05_RS24485 PF01740 STAS domain JYK05_RS24485 PF00916 Sulfate permease family JYK05_RS24490 PF03976 Polyphosphate kinase 2 (PPK2) JYK05_RS24550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JYK05_RS24550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JYK05_RS24555 PF02080 TrkA-C domain JYK05_RS24555 PF06826 Predicted Permease Membrane Region JYK05_RS24560 PF00128 Alpha amylase, catalytic domain JYK05_RS24560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JYK05_RS24565 PF00343 Carbohydrate phosphorylase JYK05_RS24580 PF00072 Response regulator receiver domain JYK05_RS24580 PF02954 Bacterial regulatory protein, Fis family JYK05_RS24580 PF00158 Sigma-54 interaction domain JYK05_RS24585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS24585 PF13426 PAS domain JYK05_RS24585 PF00072 Response regulator receiver domain JYK05_RS24590 PF07690 Major Facilitator Superfamily JYK05_RS24595 PF03551 Transcriptional regulator PadR-like family JYK05_RS24600 PF04954 Siderophore-interacting protein JYK05_RS24600 PF08021 Siderophore-interacting FAD-binding domain JYK05_RS24605 PF03466 LysR substrate binding domain JYK05_RS24605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS24620 PF08220 DeoR-like helix-turn-helix domain JYK05_RS24620 PF00455 DeoR C terminal sensor domain JYK05_RS24625 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS24630 PF00005 ABC transporter JYK05_RS24635 PF13407 Periplasmic binding protein domain JYK05_RS24640 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS24645 PF00294 pfkB family carbohydrate kinase JYK05_RS24645 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JYK05_RS24650 PF05025 RbsD / FucU transport protein family JYK05_RS24655 PF00171 Aldehyde dehydrogenase family JYK05_RS24660 PF01791 DeoC/LacD family aldolase JYK05_RS24665 PF00296 Luciferase-like monooxygenase JYK05_RS24675 PF00005 ABC transporter JYK05_RS24675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JYK05_RS24680 PF12911 N-terminal TM domain of oligopeptide transport permease C JYK05_RS24680 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS24685 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS24690 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JYK05_RS24695 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JYK05_RS24695 PF04101 Glycosyltransferase family 28 C-terminal domain JYK05_RS24715 PF02954 Bacterial regulatory protein, Fis family JYK05_RS24715 PF00158 Sigma-54 interaction domain JYK05_RS24715 PF06506 Propionate catabolism activator JYK05_RS24725 PF00285 Citrate synthase, C-terminal domain JYK05_RS24730 PF00330 Aconitase family (aconitate hydratase) JYK05_RS24730 PF00694 Aconitase C-terminal domain JYK05_RS24735 PF04303 PrpF protein JYK05_RS24745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS24745 PF03466 LysR substrate binding domain JYK05_RS24750 PF07690 Major Facilitator Superfamily JYK05_RS24755 PF01979 Amidohydrolase family JYK05_RS24765 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS24765 PF07702 UTRA domain JYK05_RS24785 PF00550 Phosphopantetheine attachment site JYK05_RS24815 PF00593 TonB dependent receptor JYK05_RS24815 PF07715 TonB-dependent Receptor Plug Domain JYK05_RS24825 PF00005 ABC transporter JYK05_RS24825 PF12704 MacB-like periplasmic core domain JYK05_RS24825 PF02687 FtsX-like permease family JYK05_RS24835 PF12704 MacB-like periplasmic core domain JYK05_RS24835 PF00005 ABC transporter JYK05_RS24835 PF02687 FtsX-like permease family JYK05_RS24840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JYK05_RS24845 PF00180 Isocitrate/isopropylmalate dehydrogenase JYK05_RS24855 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS24855 PF00563 EAL domain JYK05_RS24855 PF00360 Phytochrome region JYK05_RS24855 PF01590 GAF domain JYK05_RS24870 PF14031 Putative serine dehydratase domain JYK05_RS24870 PF01168 Alanine racemase, N-terminal domain JYK05_RS24875 PF02515 CoA-transferase family III JYK05_RS24880 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS24885 PF07690 Major Facilitator Superfamily JYK05_RS24890 PF02913 FAD linked oxidases, C-terminal domain JYK05_RS24890 PF01565 FAD binding domain JYK05_RS24890 PF13183 4Fe-4S dicluster domain JYK05_RS24900 PF00266 Aminotransferase class-V JYK05_RS24905 PF00392 Bacterial regulatory proteins, gntR family JYK05_RS24905 PF07729 FCD domain JYK05_RS24910 PF06029 AlkA N-terminal domain JYK05_RS24910 PF02805 Metal binding domain of Ada JYK05_RS24910 PF12833 Helix-turn-helix domain JYK05_RS24910 PF00730 HhH-GPD superfamily base excision DNA repair protein JYK05_RS24930 PF00248 Aldo/keto reductase family JYK05_RS24935 PF07690 Major Facilitator Superfamily JYK05_RS24940 PF08450 SMP-30/Gluconolactonase/LRE-like region JYK05_RS24945 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS24950 PF00356 Bacterial regulatory proteins, lacI family JYK05_RS24955 PF07690 Major Facilitator Superfamily JYK05_RS24960 PF00672 HAMP domain JYK05_RS24960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS24960 PF02203 Tar ligand binding domain homologue JYK05_RS24965 PF00535 Glycosyl transferase family 2 JYK05_RS24975 PF00072 Response regulator receiver domain JYK05_RS24975 PF00486 Transcriptional regulatory protein, C terminal JYK05_RS24980 PF00563 EAL domain JYK05_RS24980 PF12792 CSS motif domain associated with EAL JYK05_RS24995 PF00313 'Cold-shock' DNA-binding domain JYK05_RS25005 PF01925 Sulfite exporter TauE/SafE JYK05_RS25010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS25010 PF03466 LysR substrate binding domain JYK05_RS25015 PF03976 Polyphosphate kinase 2 (PPK2) JYK05_RS25020 PF04325 Protein of unknown function (DUF465) JYK05_RS25030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS25030 PF03466 LysR substrate binding domain JYK05_RS25035 PF07690 Major Facilitator Superfamily JYK05_RS25040 PF04909 Amidohydrolase JYK05_RS25045 PF03737 Aldolase/RraA JYK05_RS25050 PF00158 Sigma-54 interaction domain JYK05_RS25050 PF00072 Response regulator receiver domain JYK05_RS25050 PF02954 Bacterial regulatory protein, Fis family JYK05_RS25055 PF00561 alpha/beta hydrolase fold JYK05_RS25070 PF01204 Trehalase JYK05_RS25075 PF01263 Aldose 1-epimerase JYK05_RS25085 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS25085 PF00989 PAS fold JYK05_RS25085 PF16736 Single Cache-like JYK05_RS25085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS25100 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JYK05_RS25130 PF07690 Major Facilitator Superfamily JYK05_RS25135 PF00456 Transketolase, thiamine diphosphate binding domain JYK05_RS25140 PF02779 Transketolase, pyrimidine binding domain JYK05_RS25140 PF02780 Transketolase, C-terminal domain JYK05_RS25150 PF00691 OmpA family JYK05_RS25150 PF13488 Glycine zipper JYK05_RS25165 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS25170 PF00005 ABC transporter JYK05_RS25175 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JYK05_RS25180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JYK05_RS25185 PF00920 Dehydratase family JYK05_RS25190 PF03466 LysR substrate binding domain JYK05_RS25190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS25195 PF00144 Beta-lactamase JYK05_RS25205 PF04632 Fusaric acid resistance protein family JYK05_RS25215 PF13533 Biotin-lipoyl like JYK05_RS25220 PF02321 Outer membrane efflux protein JYK05_RS25235 PF00174 Oxidoreductase molybdopterin binding domain JYK05_RS25240 PF01292 Prokaryotic cytochrome b561 JYK05_RS25245 PF04542 Sigma-70 region 2 JYK05_RS25245 PF08281 Sigma-70, region 4 JYK05_RS25250 PF06532 Negative regulator of sigma F JYK05_RS25255 PF00440 Bacterial regulatory proteins, tetR family JYK05_RS25255 PF18665 Tetracyclin repressor-like, C-terminal domain JYK05_RS25260 PF02798 Glutathione S-transferase, N-terminal domain JYK05_RS25260 PF00043 Glutathione S-transferase, C-terminal domain JYK05_RS25270 PF08666 SAF domain JYK05_RS25270 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JYK05_RS25275 PF00701 Dihydrodipicolinate synthetase family JYK05_RS25285 PF13609 Gram-negative porin JYK05_RS25300 PF03783 Curli production assembly/transport component CsgG JYK05_RS25305 PF10614 Type VIII secretion system (T8SS), CsgF protein JYK05_RS25315 PF00561 alpha/beta hydrolase fold JYK05_RS25320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS25320 PF03466 LysR substrate binding domain JYK05_RS25325 PF00563 EAL domain JYK05_RS25325 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS25325 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS25330 PF08448 PAS fold JYK05_RS25330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JYK05_RS25330 PF00512 His Kinase A (phospho-acceptor) domain JYK05_RS25330 PF13188 PAS domain JYK05_RS25330 PF00072 Response regulator receiver domain JYK05_RS25360 PF02203 Tar ligand binding domain homologue JYK05_RS25360 PF00672 HAMP domain JYK05_RS25360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JYK05_RS25365 PF00544 Pectate lyase JYK05_RS25370 PF01370 NAD dependent epimerase/dehydratase family JYK05_RS25400 PF00534 Glycosyl transferases group 1 JYK05_RS25410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JYK05_RS25410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JYK05_RS25410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JYK05_RS25420 PF03737 Aldolase/RraA JYK05_RS25425 PF04909 Amidohydrolase JYK05_RS25430 PF07690 Major Facilitator Superfamily JYK05_RS25435 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JYK05_RS25435 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit JYK05_RS25455 PF00563 EAL domain JYK05_RS25455 PF03707 Bacterial signalling protein N terminal repeat JYK05_RS25455 PF13188 PAS domain JYK05_RS25455 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS25480 PF06629 MltA-interacting protein MipA JYK05_RS25485 PF07690 Major Facilitator Superfamily JYK05_RS25490 PF01758 Sodium Bile acid symporter family JYK05_RS25505 PF13533 Biotin-lipoyl like JYK05_RS25510 PF07690 Major Facilitator Superfamily JYK05_RS25515 PF02321 Outer membrane efflux protein JYK05_RS25520 PF01204 Trehalase JYK05_RS25525 PF08274 PhnA Zinc-Ribbon JYK05_RS25525 PF03831 PhnA domain JYK05_RS25530 PF00905 Penicillin binding protein transpeptidase domain JYK05_RS25530 PF00912 Transglycosylase JYK05_RS25535 PF00005 ABC transporter JYK05_RS25540 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS25545 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS25555 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JYK05_RS25560 PF03060 Nitronate monooxygenase JYK05_RS25565 PF00171 Aldehyde dehydrogenase family JYK05_RS25570 PF03466 LysR substrate binding domain JYK05_RS25570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS25580 PF00274 Fructose-bisphosphate aldolase class-I JYK05_RS25590 PF00561 alpha/beta hydrolase fold JYK05_RS25595 PF03466 LysR substrate binding domain JYK05_RS25595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JYK05_RS25605 PF03330 Lytic transglycolase JYK05_RS25605 PF05036 Sporulation related domain JYK05_RS25630 PF09297 NADH pyrophosphatase zinc ribbon domain JYK05_RS25630 PF00293 NUDIX domain JYK05_RS25630 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain JYK05_RS25635 PF00356 Bacterial regulatory proteins, lacI family JYK05_RS25640 PF07690 Major Facilitator Superfamily JYK05_RS25645 PF03737 Aldolase/RraA JYK05_RS25650 PF00920 Dehydratase family JYK05_RS25655 PF01914 MarC family integral membrane protein JYK05_RS25680 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS25680 PF00107 Zinc-binding dehydrogenase JYK05_RS25725 PF03060 Nitronate monooxygenase JYK05_RS25745 PF06481 COX Aromatic Rich Motif JYK05_RS25745 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JYK05_RS25750 PF00115 Cytochrome C and Quinol oxidase polypeptide I JYK05_RS25755 PF00510 Cytochrome c oxidase subunit III JYK05_RS25760 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JYK05_RS25770 PF07690 Major Facilitator Superfamily JYK05_RS25780 PF01614 Bacterial transcriptional regulator JYK05_RS25780 PF09339 IclR helix-turn-helix domain JYK05_RS25790 PF00144 Beta-lactamase JYK05_RS25810 PF00072 Response regulator receiver domain JYK05_RS25820 PF02321 Outer membrane efflux protein JYK05_RS25825 PF07690 Major Facilitator Superfamily JYK05_RS25830 PF13533 Biotin-lipoyl like JYK05_RS25835 PF09339 IclR helix-turn-helix domain JYK05_RS25835 PF01614 Bacterial transcriptional regulator JYK05_RS25845 PF13407 Periplasmic binding protein domain JYK05_RS25850 PF13185 GAF domain JYK05_RS25855 PF00480 ROK family JYK05_RS25855 PF01047 MarR family JYK05_RS25860 PF00005 ABC transporter JYK05_RS25865 PF02653 Branched-chain amino acid transport system / permease component JYK05_RS25870 PF13407 Periplasmic binding protein domain JYK05_RS25875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JYK05_RS25875 PF07992 Pyridine nucleotide-disulphide oxidoreductase JYK05_RS25900 PF00106 short chain dehydrogenase JYK05_RS25905 PF02803 Thiolase, C-terminal domain JYK05_RS25905 PF00108 Thiolase, N-terminal domain JYK05_RS25910 PF00067 Cytochrome P450 JYK05_RS25920 PF01566 Natural resistance-associated macrophage protein JYK05_RS25930 PF13614 AAA domain JYK05_RS25945 PF04545 Sigma-70, region 4 JYK05_RS25945 PF04539 Sigma-70 region 3 JYK05_RS25945 PF04542 Sigma-70 region 2 JYK05_RS25945 PF00140 Sigma-70 factor, region 1.2 JYK05_RS25945 PF03979 Sigma-70 factor, region 1.1 JYK05_RS25945 PF04546 Sigma-70, non-essential region JYK05_RS25955 PF02798 Glutathione S-transferase, N-terminal domain JYK05_RS25995 PF00293 NUDIX domain JYK05_RS26000 PF03459 TOBE domain JYK05_RS26000 PF00005 ABC transporter JYK05_RS26005 PF00528 Binding-protein-dependent transport system inner membrane component JYK05_RS26015 PF00378 Enoyl-CoA hydratase/isomerase JYK05_RS26030 PF00034 Cytochrome c JYK05_RS26035 PF07995 Glucose / Sorbosone dehydrogenase JYK05_RS26050 PF00563 EAL domain JYK05_RS26050 PF01590 GAF domain JYK05_RS26050 PF00990 Diguanylate cyclase, GGDEF domain JYK05_RS26050 PF00360 Phytochrome region JYK05_RS26080 PF00270 DEAD/DEAH box helicase JYK05_RS26080 PF00271 Helicase conserved C-terminal domain JYK05_RS26080 PF00570 HRDC domain JYK05_RS26080 PF16124 RecQ zinc-binding JYK05_RS26080 PF09382 RQC domain JYK05_RS26090 PF13823 Alcohol dehydrogenase GroES-associated JYK05_RS26090 PF00107 Zinc-binding dehydrogenase JYK05_RS26090 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS26095 PF13609 Gram-negative porin JYK05_RS26100 PF05067 Manganese containing catalase JYK05_RS26105 PF13823 Alcohol dehydrogenase GroES-associated JYK05_RS26105 PF00107 Zinc-binding dehydrogenase JYK05_RS26105 PF08240 Alcohol dehydrogenase GroES-like domain JYK05_RS26115 PF07581 The GLUG motif JYK05_RS26115 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) JYK05_RS26125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JYK05_RS26135 PF00005 ABC transporter JYK05_RS26150 PF04143 Sulphur transport JYK05_RS26155 PF00881 Nitroreductase family JYK05_RS26170 PF00953 Glycosyl transferase family 4 JYK05_RS26170 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JYK05_RS26175 PF06426 Serine acetyltransferase, N-terminal JYK05_RS26175 PF00132 Bacterial transferase hexapeptide (six repeats) JYK05_RS26200 PF12708 Pectate lyase superfamily protein JYK05_RS26200 PF13229 Right handed beta helix region JYK05_RS26200 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JYK05_RS26210 PF00534 Glycosyl transferases group 1 JYK05_RS26210 PF13439 Glycosyltransferase Family 4 JYK05_RS26220 PF00534 Glycosyl transferases group 1 JYK05_RS26220 PF13439 Glycosyltransferase Family 4