CA733_RS00005	SM00912	haemagglutination activity domain
CA733_RS00010	SM00912	haemagglutination activity domain
CA733_RS00020	SM00028	Tetratricopeptide repeats
CA733_RS00100	SM00327	von Willebrand factor (vWF) type A domain
CA733_RS00110	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CA733_RS00110	SM00292	breast cancer carboxy-terminal domain
CA733_RS00110	SM00532	Ligase N family
CA733_RS00115	SM00387	Histidine kinase-like ATPases
CA733_RS00120	SM00421	helix_turn_helix, Lux Regulon
CA733_RS00120	SM00448	cheY-homologous receiver domain
CA733_RS00130	SM00240	Forkhead associated domain
CA733_RS00245	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS00250	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS00270	SM00382	ATPases associated with a variety of cellular activities
CA733_RS00310	SM00382	ATPases associated with a variety of cellular activities
CA733_RS00340	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS00340	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS00340	SM00387	Histidine kinase-like ATPases
CA733_RS00340	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS00345	SM00382	ATPases associated with a variety of cellular activities
CA733_RS00355	SM00271	DnaJ molecular chaperone homology domain
CA733_RS00485	SM00930	CA733_RS00485
CA733_RS00640	SM00316	Ribosomal protein S1-like RNA-binding domain
CA733_RS00680	SM00421	helix_turn_helix, Lux Regulon
CA733_RS00695	SM00237	Domains in Na-Ca exchangers and integrin-beta4
CA733_RS00710	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS00710	SM00091	PAS domain
CA733_RS00710	SM00387	Histidine kinase-like ATPases
CA733_RS00710	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS00710	SM00448	cheY-homologous receiver domain
CA733_RS00715	SM00448	cheY-homologous receiver domain
CA733_RS00720	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS00720	SM00387	Histidine kinase-like ATPases
CA733_RS00720	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS00730	SM00567	E-Z type HEAT repeats
CA733_RS00770	SM00448	cheY-homologous receiver domain
CA733_RS00770	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS00805	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS00810	SM00240	Forkhead associated domain
CA733_RS00815	SM00382	ATPases associated with a variety of cellular activities
CA733_RS00825	SM01234	CA733_RS00825
CA733_RS00830	SM00382	ATPases associated with a variety of cellular activities
CA733_RS00835	SM00387	Histidine kinase-like ATPases
CA733_RS00835	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS00895	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CA733_RS00960	SM00320	WD40 repeats
CA733_RS00975	SM00968	SMC proteins Flexible Hinge Domain
CA733_RS00990	SM00028	Tetratricopeptide repeats
CA733_RS01040	SM00773	Proposed nucleic acid binding domain
CA733_RS01050	SM00382	ATPases associated with a variety of cellular activities
CA733_RS01105	SM00448	cheY-homologous receiver domain
CA733_RS01115	SM00320	WD40 repeats
CA733_RS01135	SM00881	CoA binding domain
CA733_RS01215	SM00237	Domains in Na-Ca exchangers and integrin-beta4
CA733_RS01245	SM00387	Histidine kinase-like ATPases
CA733_RS01245	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS01245	SM00448	cheY-homologous receiver domain
CA733_RS01250	SM00387	Histidine kinase-like ATPases
CA733_RS01250	SM00448	cheY-homologous receiver domain
CA733_RS01255	SM00028	Tetratricopeptide repeats
CA733_RS01260	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS01260	SM00091	PAS domain
CA733_RS01260	SM00387	Histidine kinase-like ATPases
CA733_RS01260	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS01260	SM00448	cheY-homologous receiver domain
CA733_RS01265	SM00487	DEAD-like helicases superfamily
CA733_RS01265	SM00490	helicase superfamily c-terminal domain
CA733_RS01295	SM00327	von Willebrand factor (vWF) type A domain
CA733_RS01340	SM00363	S4 RNA-binding domain
CA733_RS01405	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS01410	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CA733_RS01410	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS01410	SM00240	Forkhead associated domain
CA733_RS01420	SM00710	Parallel beta-helix repeats
CA733_RS01455	SM01007	Class II Aldolase and Adducin N-terminal domain
CA733_RS01475	SM00947	Carbonic anhydrase
CA733_RS01555	SM00663	RNA polymerase I subunit A N-terminus
CA733_RS01690	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS01690	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS01690	SM00091	PAS domain
CA733_RS01690	SM00387	Histidine kinase-like ATPases
CA733_RS01690	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS01690	SM00448	cheY-homologous receiver domain
CA733_RS01715	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS01715	SM00091	PAS domain
CA733_RS01715	SM00387	Histidine kinase-like ATPases
CA733_RS01715	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS01715	SM00448	cheY-homologous receiver domain
CA733_RS01725	SM00912	haemagglutination activity domain
CA733_RS01735	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CA733_RS01735	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS01735	SM00091	PAS domain
CA733_RS01765	SM00382	ATPases associated with a variety of cellular activities
CA733_RS01930	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS01930	SM00387	Histidine kinase-like ATPases
CA733_RS01950	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CA733_RS02000	SM00028	Tetratricopeptide repeats
CA733_RS02035	SM01382	CA733_RS02035
CA733_RS02035	SM01383	CA733_RS02035
CA733_RS02050	SM00322	K homology RNA-binding domain
CA733_RS02070	SM01374	CA733_RS02070
CA733_RS02075	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CA733_RS02120	SM00316	Ribosomal protein S1-like RNA-binding domain
CA733_RS02140	SM00662	RNA polymerases D
CA733_RS02170	SM00937	CA733_RS02170
CA733_RS02185	SM00382	ATPases associated with a variety of cellular activities
CA733_RS02200	SM00235	Zinc-dependent metalloprotease
CA733_RS02255	SM01133	CA733_RS02255
CA733_RS02300	SM00382	ATPases associated with a variety of cellular activities
CA733_RS02315	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS02375	SM00382	ATPases associated with a variety of cellular activities
CA733_RS02410	SM00382	ATPases associated with a variety of cellular activities
CA733_RS02465	SM00305	Hint (Hedgehog/Intein) domain C-terminal region
CA733_RS02465	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CA733_RS02480	SM00849	Metallo-beta-lactamase superfamily
CA733_RS02505	SM00382	ATPases associated with a variety of cellular activities
CA733_RS02560	SM00240	Forkhead associated domain
CA733_RS02565	SM00240	Forkhead associated domain
CA733_RS02575	SM00855	Phosphoglycerate mutase family
CA733_RS02580	SM00450	Rhodanese Homology Domain
CA733_RS02600	SM00387	Histidine kinase-like ATPases
CA733_RS02600	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS02625	SM00925	MltA specific insert domain
CA733_RS02665	SM00382	ATPases associated with a variety of cellular activities
CA733_RS02675	SM00861	Transketolase, pyrimidine binding domain
CA733_RS02700	SM00849	Metallo-beta-lactamase superfamily
CA733_RS02715	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS02715	SM00245	tail specific protease
CA733_RS02750	SM00028	Tetratricopeptide repeats
CA733_RS02775	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS02820	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS02855	SM00028	Tetratricopeptide repeats
CA733_RS02880	SM00382	ATPases associated with a variety of cellular activities
CA733_RS02890	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS02905	SM00364	Leucine-rich repeats, bacterial type
CA733_RS02905	SM00365	Leucine-rich repeat, SDS22-like subfamily
CA733_RS02905	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CA733_RS02915	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
CA733_RS02935	SM00930	CA733_RS02935
CA733_RS02940	SM00930	CA733_RS02940
CA733_RS02950	SM00382	ATPases associated with a variety of cellular activities
CA733_RS02995	SM00930	CA733_RS02995
CA733_RS03000	SM00930	CA733_RS03000
CA733_RS03005	SM00382	ATPases associated with a variety of cellular activities
CA733_RS03040	SM00857	Resolvase, N terminal domain
CA733_RS03195	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CA733_RS03220	SM00382	ATPases associated with a variety of cellular activities
CA733_RS03225	SM00382	ATPases associated with a variety of cellular activities
CA733_RS03225	SM01086	C-terminal, D2-small domain, of ClpB protein
CA733_RS03255	SM00271	DnaJ molecular chaperone homology domain
CA733_RS03300	SM00292	breast cancer carboxy-terminal domain
CA733_RS03315	SM00320	WD40 repeats
CA733_RS03315	SM00382	ATPases associated with a variety of cellular activities
CA733_RS03335	SM01321	CA733_RS03335
CA733_RS03340	SM00382	ATPases associated with a variety of cellular activities
CA733_RS03350	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS03360	SM00986	Uracil DNA glycosylase superfamily
CA733_RS03360	SM00987	UreE urease accessory protein, C-terminal domain 
CA733_RS03410	SM00382	ATPases associated with a variety of cellular activities
CA733_RS03450	SM00382	ATPases associated with a variety of cellular activities
CA733_RS03480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS03480	SM00387	Histidine kinase-like ATPases
CA733_RS03480	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS03480	SM00448	cheY-homologous receiver domain
CA733_RS03490	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CA733_RS03560	SM00382	ATPases associated with a variety of cellular activities
CA733_RS03565	SM00912	haemagglutination activity domain
CA733_RS03585	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS03590	SM00320	WD40 repeats
CA733_RS03595	SM00773	Proposed nucleic acid binding domain
CA733_RS03655	SM00320	WD40 repeats
CA733_RS03685	SM00155	Phospholipase D. Active site motifs.
CA733_RS03720	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS03725	SM00860	SMI1 / KNR4 family
CA733_RS03730	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS03790	SM00563	Phosphate acyltransferases
CA733_RS03855	SM00028	Tetratricopeptide repeats
CA733_RS03890	SM00758	CA733_RS03890
CA733_RS03895	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS03895	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS03895	SM00091	PAS domain
CA733_RS03895	SM00387	Histidine kinase-like ATPases
CA733_RS03895	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS03895	SM00448	cheY-homologous receiver domain
CA733_RS03895	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS03900	SM00448	cheY-homologous receiver domain
CA733_RS03910	SM00028	Tetratricopeptide repeats
CA733_RS03945	SM00320	WD40 repeats
CA733_RS03945	SM00382	ATPases associated with a variety of cellular activities
CA733_RS03955	SM00382	ATPases associated with a variety of cellular activities
CA733_RS04045	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS04090	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS04155	SM00448	cheY-homologous receiver domain
CA733_RS04160	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS04160	SM00091	PAS domain
CA733_RS04160	SM00387	Histidine kinase-like ATPases
CA733_RS04160	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS04160	SM00448	cheY-homologous receiver domain
CA733_RS04165	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS04165	SM00387	Histidine kinase-like ATPases
CA733_RS04175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS04175	SM00387	Histidine kinase-like ATPases
CA733_RS04175	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS04180	SM00448	cheY-homologous receiver domain
CA733_RS04180	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS04220	SM01230	CA733_RS04220
CA733_RS04235	SM00363	S4 RNA-binding domain
CA733_RS04240	SM01093	CA733_RS04240
CA733_RS04275	SM01001	AIR carboxylase
CA733_RS04335	SM00028	Tetratricopeptide repeats
CA733_RS04335	SM00421	helix_turn_helix, Lux Regulon
CA733_RS04350	SM00450	Rhodanese Homology Domain
CA733_RS04360	SM00382	ATPases associated with a variety of cellular activities
CA733_RS04400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS04400	SM00387	Histidine kinase-like ATPases
CA733_RS04400	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS04440	SM00382	ATPases associated with a variety of cellular activities
CA733_RS04480	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS04480	SM00331	Sigma factor PP2C-like phosphatases
CA733_RS04480	SM00448	cheY-homologous receiver domain
CA733_RS04485	SM00421	helix_turn_helix, Lux Regulon
CA733_RS04485	SM00448	cheY-homologous receiver domain
CA733_RS04495	SM00382	ATPases associated with a variety of cellular activities
CA733_RS04500	SM00387	Histidine kinase-like ATPases
CA733_RS04500	SM00448	cheY-homologous receiver domain
CA733_RS04505	SM00387	Histidine kinase-like ATPases
CA733_RS04505	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS04505	SM00448	cheY-homologous receiver domain
CA733_RS04520	SM00919	Malic enzyme, NAD binding domain
CA733_RS04520	SM01274	CA733_RS04520
CA733_RS04530	SM00382	ATPases associated with a variety of cellular activities
CA733_RS04555	SM00382	ATPases associated with a variety of cellular activities
CA733_RS04560	SM00563	Phosphate acyltransferases
CA733_RS04565	SM00448	cheY-homologous receiver domain
CA733_RS04565	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS04660	SM00822	CA733_RS04660
CA733_RS04680	SM00382	ATPases associated with a variety of cellular activities
CA733_RS04715	SM00382	ATPases associated with a variety of cellular activities
CA733_RS04720	SM00382	ATPases associated with a variety of cellular activities
CA733_RS04745	SM00855	Phosphoglycerate mutase family
CA733_RS04765	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS04835	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS04855	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS04880	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS04915	SM00320	WD40 repeats
CA733_RS04930	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS04930	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS04930	SM00091	PAS domain
CA733_RS04930	SM00387	Histidine kinase-like ATPases
CA733_RS04930	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS04980	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CA733_RS04980	SM00954	Region found in RelA / SpoT proteins
CA733_RS05015	SM00822	CA733_RS05015
CA733_RS05035	SM00448	cheY-homologous receiver domain
CA733_RS05040	SM00028	Tetratricopeptide repeats
CA733_RS05040	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS05070	SM00360	RNA recognition motif
CA733_RS05080	SM00360	RNA recognition motif
CA733_RS05105	SM00360	RNA recognition motif
CA733_RS05130	SM00387	Histidine kinase-like ATPases
CA733_RS05140	SM00244	prohibitin homologues
CA733_RS05165	SM00028	Tetratricopeptide repeats
CA733_RS05175	SM00955	CA733_RS05175
CA733_RS05205	SM00852	Probable molybdopterin binding domain
CA733_RS05230	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS05230	SM00387	Histidine kinase-like ATPases
CA733_RS05235	SM00448	cheY-homologous receiver domain
CA733_RS05250	SM00155	Phospholipase D. Active site motifs.
CA733_RS05275	SM00419	helix_turn_helix, cAMP Regulatory protein
CA733_RS05280	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS05280	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CA733_RS05285	SM00382	ATPases associated with a variety of cellular activities
CA733_RS05300	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CA733_RS05320	SM00052	Putative diguanylate phosphodiesterase
CA733_RS05320	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS05320	SM00240	Forkhead associated domain
CA733_RS05320	SM00267	diguanylate cyclase
CA733_RS05390	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS05395	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS05485	SM00028	Tetratricopeptide repeats
CA733_RS05490	SM00028	Tetratricopeptide repeats
CA733_RS05550	SM00382	ATPases associated with a variety of cellular activities
CA733_RS05565	SM00098	Alkaline phosphatase homologues
CA733_RS05685	SM00460	Transglutaminase/protease-like homologues
CA733_RS05695	SM00091	PAS domain
CA733_RS05695	SM00387	Histidine kinase-like ATPases
CA733_RS05695	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS05695	SM00448	cheY-homologous receiver domain
CA733_RS05740	SM00091	PAS domain
CA733_RS05740	SM00387	Histidine kinase-like ATPases
CA733_RS05740	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS05740	SM00448	cheY-homologous receiver domain
CA733_RS05760	SM00829	Enoylreductase
CA733_RS05810	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS05810	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS05810	SM00387	Histidine kinase-like ATPases
CA733_RS05810	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS05815	SM00823	Phosphopantetheine attachment site
CA733_RS05850	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS05850	SM00320	WD40 repeats
CA733_RS05855	SM00320	WD40 repeats
CA733_RS05855	SM00382	ATPases associated with a variety of cellular activities
CA733_RS05960	SM01207	CA733_RS05960
CA733_RS06020	SM00487	DEAD-like helicases superfamily
CA733_RS06020	SM00490	helicase superfamily c-terminal domain
CA733_RS06020	SM01142	CA733_RS06020
CA733_RS06025	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS06025	SM00091	PAS domain
CA733_RS06025	SM00387	Histidine kinase-like ATPases
CA733_RS06025	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS06030	SM00226	Low molecular weight phosphatase family
CA733_RS06045	SM00318	Staphylococcal nuclease homologues
CA733_RS06050	SM00028	Tetratricopeptide repeats
CA733_RS06080	SM00448	cheY-homologous receiver domain
CA733_RS06080	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS06150	SM00318	Staphylococcal nuclease homologues
CA733_RS06160	SM00028	Tetratricopeptide repeats
CA733_RS06160	SM00271	DnaJ molecular chaperone homology domain
CA733_RS06175	SM00382	ATPases associated with a variety of cellular activities
CA733_RS06180	SM00947	Carbonic anhydrase
CA733_RS06195	SM00232	JAB/MPN domain
CA733_RS06200	SM00450	Rhodanese Homology Domain
CA733_RS06250	SM00091	PAS domain
CA733_RS06250	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS06250	SM00387	Histidine kinase-like ATPases
CA733_RS06250	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS06255	SM01209	CA733_RS06255
CA733_RS06255	SM01210	CA733_RS06255
CA733_RS06345	SM00382	ATPases associated with a variety of cellular activities
CA733_RS06365	SM01120	CA733_RS06365
CA733_RS06385	SM00857	Resolvase, N terminal domain
CA733_RS06500	SM00320	WD40 repeats
CA733_RS06625	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS06635	SM00487	DEAD-like helicases superfamily
CA733_RS06635	SM00490	helicase superfamily c-terminal domain
CA733_RS06660	SM00849	Metallo-beta-lactamase superfamily
CA733_RS06660	SM00903	Flavin reductase like domain
CA733_RS06665	SM00387	Histidine kinase-like ATPases
CA733_RS06665	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS06665	SM00448	cheY-homologous receiver domain
CA733_RS06670	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS06670	SM00091	PAS domain
CA733_RS06670	SM00387	Histidine kinase-like ATPases
CA733_RS06670	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS06670	SM00448	cheY-homologous receiver domain
CA733_RS06685	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CA733_RS06710	SM00670	Large family of predicted nucleotide-binding domains
CA733_RS06755	SM01329	CA733_RS06755
CA733_RS06760	SM01359	CA733_RS06760
CA733_RS06760	SM01360	CA733_RS06760
CA733_RS06765	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS06765	SM00387	Histidine kinase-like ATPases
CA733_RS06765	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS06810	SM00382	ATPases associated with a variety of cellular activities
CA733_RS06835	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS06865	SM00382	ATPases associated with a variety of cellular activities
CA733_RS06875	SM00450	Rhodanese Homology Domain
CA733_RS06945	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS07000	SM00382	ATPases associated with a variety of cellular activities
CA733_RS07035	SM00138	Methyltransferase, chemotaxis proteins 
CA733_RS07035	SM00387	Histidine kinase-like ATPases
CA733_RS07035	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS07035	SM00448	cheY-homologous receiver domain
CA733_RS07045	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS07070	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS07070	SM00320	WD40 repeats
CA733_RS07075	SM00822	CA733_RS07075
CA733_RS07140	SM00421	helix_turn_helix, Lux Regulon
CA733_RS07140	SM00448	cheY-homologous receiver domain
CA733_RS07145	SM00387	Histidine kinase-like ATPases
CA733_RS07145	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS07185	SM00382	ATPases associated with a variety of cellular activities
CA733_RS07240	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS07240	SM01093	CA733_RS07240
CA733_RS07255	SM00823	Phosphopantetheine attachment site
CA733_RS07270	SM00028	Tetratricopeptide repeats
CA733_RS07290	SM00487	DEAD-like helicases superfamily
CA733_RS07290	SM00490	helicase superfamily c-terminal domain
CA733_RS07345	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS07345	SM01080	CA733_RS07345
CA733_RS07370	SM00382	ATPases associated with a variety of cellular activities
CA733_RS07405	SM00271	DnaJ molecular chaperone homology domain
CA733_RS07440	SM00567	E-Z type HEAT repeats
CA733_RS07605	SM00507	HNH nucleases
CA733_RS07635	SM01080	CA733_RS07635
CA733_RS07645	SM00448	cheY-homologous receiver domain
CA733_RS07660	SM00382	ATPases associated with a variety of cellular activities
CA733_RS07700	SM00028	Tetratricopeptide repeats
CA733_RS07725	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CA733_RS07780	SM00382	ATPases associated with a variety of cellular activities
CA733_RS07905	SM00382	ATPases associated with a variety of cellular activities
CA733_RS07930	SM00823	Phosphopantetheine attachment site
CA733_RS07935	SM00823	Phosphopantetheine attachment site
CA733_RS07950	SM00897	FIST N domain
CA733_RS07950	SM01204	CA733_RS07950
CA733_RS07955	SM01093	CA733_RS07955
CA733_RS07990	SM00612	CA733_RS07990
CA733_RS07995	SM00287	Bacterial SH3 domain homologues
CA733_RS08005	SM00028	Tetratricopeptide repeats
CA733_RS08025	SM00448	cheY-homologous receiver domain
CA733_RS08030	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS08030	SM00387	Histidine kinase-like ATPases
CA733_RS08030	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS08055	SM00387	Histidine kinase-like ATPases
CA733_RS08055	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS08060	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS08070	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS08095	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS08095	SM00091	PAS domain
CA733_RS08095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS08095	SM00387	Histidine kinase-like ATPases
CA733_RS08095	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS08095	SM00448	cheY-homologous receiver domain
CA733_RS08105	SM00387	Histidine kinase-like ATPases
CA733_RS08105	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS08105	SM00448	cheY-homologous receiver domain
CA733_RS08150	SM00344	helix_turn_helix ASNC type
CA733_RS08180	SM00382	ATPases associated with a variety of cellular activities
CA733_RS08200	SM00912	haemagglutination activity domain
CA733_RS08205	SM00028	Tetratricopeptide repeats
CA733_RS08210	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS08210	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS08210	SM00387	Histidine kinase-like ATPases
CA733_RS08220	SM01080	CA733_RS08220
CA733_RS08265	SM01260	CA733_RS08265
CA733_RS08275	SM00382	ATPases associated with a variety of cellular activities
CA733_RS08315	SM00331	Sigma factor PP2C-like phosphatases
CA733_RS08315	SM00448	cheY-homologous receiver domain
CA733_RS08325	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS08325	SM00073	Histidine Phosphotransfer domain
CA733_RS08325	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS08325	SM00091	PAS domain
CA733_RS08325	SM00387	Histidine kinase-like ATPases
CA733_RS08325	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS08325	SM00448	cheY-homologous receiver domain
CA733_RS08330	SM00267	diguanylate cyclase
CA733_RS08330	SM00448	cheY-homologous receiver domain
CA733_RS08330	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS08335	SM00448	cheY-homologous receiver domain
CA733_RS08360	SM00823	Phosphopantetheine attachment site
CA733_RS08360	SM01294	CA733_RS08360
CA733_RS08400	SM00448	cheY-homologous receiver domain
CA733_RS08405	SM00091	PAS domain
CA733_RS08405	SM00387	Histidine kinase-like ATPases
CA733_RS08405	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS08405	SM00448	cheY-homologous receiver domain
CA733_RS08425	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS08425	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS08425	SM00091	PAS domain
CA733_RS08425	SM00387	Histidine kinase-like ATPases
CA733_RS08425	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS08425	SM00448	cheY-homologous receiver domain
CA733_RS08495	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS08495	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS08495	SM00387	Histidine kinase-like ATPases
CA733_RS08495	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS08515	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
CA733_RS08520	SM01092	CO dehydrogenase flavoprotein C-terminal domain
CA733_RS08560	SM00382	ATPases associated with a variety of cellular activities
CA733_RS08585	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS08585	SM00387	Histidine kinase-like ATPases
CA733_RS08585	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS08605	SM00387	Histidine kinase-like ATPases
CA733_RS08605	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS08610	SM00382	ATPases associated with a variety of cellular activities
CA733_RS08625	SM00829	Enoylreductase
CA733_RS08655	SM00855	Phosphoglycerate mutase family
CA733_RS08685	SM00320	WD40 repeats
CA733_RS08685	SM00564	beta-propeller repeat
CA733_RS08735	SM00679	Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.
CA733_RS08755	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CA733_RS08755	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CA733_RS08755	SM00493	CA733_RS08755
CA733_RS08855	SM00271	DnaJ molecular chaperone homology domain
CA733_RS08975	SM00567	E-Z type HEAT repeats
CA733_RS09015	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS09015	SM00387	Histidine kinase-like ATPases
CA733_RS09015	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS09015	SM00448	cheY-homologous receiver domain
CA733_RS09020	SM00448	cheY-homologous receiver domain
CA733_RS09025	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS09025	SM00387	Histidine kinase-like ATPases
CA733_RS09025	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS09110	SM00365	Leucine-rich repeat, SDS22-like subfamily
CA733_RS09110	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CA733_RS09195	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CA733_RS09200	SM00535	Ribonuclease III family
CA733_RS09210	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CA733_RS09280	SM00028	Tetratricopeptide repeats
CA733_RS09285	SM00474	3'-5' exonuclease
CA733_RS09320	SM00831	Cation transporter/ATPase, N-terminus
CA733_RS09375	SM00347	helix_turn_helix multiple antibiotic resistance protein
CA733_RS09380	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS09380	SM01080	CA733_RS09380
CA733_RS09430	SM00487	DEAD-like helicases superfamily
CA733_RS09430	SM00490	helicase superfamily c-terminal domain
CA733_RS09455	SM00506	Appr-1"-p processing enzyme
CA733_RS09465	SM00642	Alpha-amylase domain
CA733_RS09495	SM00642	Alpha-amylase domain
CA733_RS09500	SM01387	CA733_RS09500
CA733_RS09620	SM00028	Tetratricopeptide repeats
CA733_RS09630	SM00912	haemagglutination activity domain
CA733_RS09635	SM00387	Histidine kinase-like ATPases
CA733_RS09635	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS09635	SM00448	cheY-homologous receiver domain
CA733_RS09640	SM00387	Histidine kinase-like ATPases
CA733_RS09640	SM00448	cheY-homologous receiver domain
CA733_RS09655	SM00028	Tetratricopeptide repeats
CA733_RS09665	SM01080	CA733_RS09665
CA733_RS09705	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS09735	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS09745	SM00331	Sigma factor PP2C-like phosphatases
CA733_RS09745	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CA733_RS09770	SM00422	helix_turn_helix, mercury resistance
CA733_RS09795	SM00422	helix_turn_helix, mercury resistance
CA733_RS09820	SM00382	ATPases associated with a variety of cellular activities
CA733_RS09855	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS09910	SM00387	Histidine kinase-like ATPases
CA733_RS09910	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS09925	SM00421	helix_turn_helix, Lux Regulon
CA733_RS09935	SM00636	CA733_RS09935
CA733_RS09945	SM00857	Resolvase, N terminal domain
CA733_RS09985	SM00849	Metallo-beta-lactamase superfamily
CA733_RS09985	SM00903	Flavin reductase like domain
CA733_RS09995	SM00849	Metallo-beta-lactamase superfamily
CA733_RS09995	SM00903	Flavin reductase like domain
CA733_RS10000	SM01150	CA733_RS10000
CA733_RS10030	SM00028	Tetratricopeptide repeats
CA733_RS10040	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS10055	SM00877	CA733_RS10055
CA733_RS10060	SM00877	CA733_RS10060
CA733_RS10095	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS10100	SM01060	CA733_RS10100
CA733_RS10115	SM00421	helix_turn_helix, Lux Regulon
CA733_RS10115	SM00448	cheY-homologous receiver domain
CA733_RS10120	SM00091	PAS domain
CA733_RS10135	SM00387	Histidine kinase-like ATPases
CA733_RS10135	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS10135	SM00448	cheY-homologous receiver domain
CA733_RS10140	SM00387	Histidine kinase-like ATPases
CA733_RS10140	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS10140	SM00448	cheY-homologous receiver domain
CA733_RS10145	SM00448	cheY-homologous receiver domain
CA733_RS10155	SM00382	ATPases associated with a variety of cellular activities
CA733_RS10195	SM00400	zinc finger
CA733_RS10195	SM00493	CA733_RS10195
CA733_RS10200	SM00646	CA733_RS10200
CA733_RS10205	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CA733_RS10205	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CA733_RS10225	SM00173	Ras subfamily of RAS small GTPases
CA733_RS10225	SM00175	Rab subfamily of small GTPases
CA733_RS10225	SM00364	Leucine-rich repeats, bacterial type
CA733_RS10225	SM00365	Leucine-rich repeat, SDS22-like subfamily
CA733_RS10225	SM00369	Leucine-rich repeats, typical (most populated) subfamily
CA733_RS10230	SM00028	Tetratricopeptide repeats
CA733_RS10235	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CA733_RS10235	SM00493	CA733_RS10235
CA733_RS10240	SM01321	CA733_RS10240
CA733_RS10250	SM00028	Tetratricopeptide repeats
CA733_RS10275	SM00382	ATPases associated with a variety of cellular activities
CA733_RS10295	SM00481	DNA polymerase alpha chain like domain
CA733_RS10335	SM01094	CpcD/allophycocyanin linker domain
CA733_RS10345	SM00448	cheY-homologous receiver domain
CA733_RS10345	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS10355	SM01094	CpcD/allophycocyanin linker domain
CA733_RS10365	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS10370	SM00930	CA733_RS10370
CA733_RS10380	SM00880	CA733_RS10380
CA733_RS10435	SM00886	Stress responsive A/B Barrel Domain
CA733_RS10440	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CA733_RS10440	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS10440	SM00091	PAS domain
CA733_RS10465	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS10465	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS10465	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS10465	SM00387	Histidine kinase-like ATPases
CA733_RS10465	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS10485	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS10490	SM00506	Appr-1"-p processing enzyme
CA733_RS10520	SM01007	Class II Aldolase and Adducin N-terminal domain
CA733_RS10525	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS10545	SM00382	ATPases associated with a variety of cellular activities
CA733_RS10545	SM00930	CA733_RS10545
CA733_RS10555	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS10615	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS10640	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS10645	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS10675	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS10680	SM00883	Chaperonin 10 Kd subunit
CA733_RS10725	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS10740	SM01007	Class II Aldolase and Adducin N-terminal domain
CA733_RS10760	SM00387	Histidine kinase-like ATPases
CA733_RS10760	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS10775	SM00448	cheY-homologous receiver domain
CA733_RS10775	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS10780	SM01021	Bacteriorhodopsin-like protein
CA733_RS10785	SM00448	cheY-homologous receiver domain
CA733_RS10785	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS10790	SM00387	Histidine kinase-like ATPases
CA733_RS10790	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS10795	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS10805	SM01080	CA733_RS10805
CA733_RS10815	SM00028	Tetratricopeptide repeats
CA733_RS10820	SM00912	haemagglutination activity domain
CA733_RS10830	SM00108	Bulb-type mannose-specific lectin
CA733_RS10830	SM00198	SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains.
CA733_RS10880	SM01350	CA733_RS10880
CA733_RS10885	SM00382	ATPases associated with a variety of cellular activities
CA733_RS10900	SM00028	Tetratricopeptide repeats
CA733_RS10905	SM00912	haemagglutination activity domain
CA733_RS10910	SM00912	haemagglutination activity domain
CA733_RS10915	SM00912	haemagglutination activity domain
CA733_RS10920	SM00912	haemagglutination activity domain
CA733_RS10925	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CA733_RS10925	SM00481	DNA polymerase alpha chain like domain
CA733_RS11020	SM00646	CA733_RS11020
CA733_RS11050	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS11070	SM00240	Forkhead associated domain
CA733_RS11135	SM00363	S4 RNA-binding domain
CA733_RS11155	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS11200	SM01001	AIR carboxylase
CA733_RS11245	SM00849	Metallo-beta-lactamase superfamily
CA733_RS11245	SM00903	Flavin reductase like domain
CA733_RS11250	SM00849	Metallo-beta-lactamase superfamily
CA733_RS11250	SM00903	Flavin reductase like domain
CA733_RS11255	SM00360	RNA recognition motif
CA733_RS11295	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CA733_RS11295	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CA733_RS11300	SM00649	Ribosomal protein L11/L12
CA733_RS11320	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS11325	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS11325	SM00091	PAS domain
CA733_RS11325	SM00387	Histidine kinase-like ATPases
CA733_RS11325	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS11325	SM00448	cheY-homologous receiver domain
CA733_RS11330	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS11330	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS11330	SM00091	PAS domain
CA733_RS11330	SM00387	Histidine kinase-like ATPases
CA733_RS11330	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS11330	SM00448	cheY-homologous receiver domain
CA733_RS11345	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS11345	SM00419	helix_turn_helix, cAMP Regulatory protein
CA733_RS11370	SM00382	ATPases associated with a variety of cellular activities
CA733_RS11395	SM00925	MltA specific insert domain
CA733_RS11415	SM00823	Phosphopantetheine attachment site
CA733_RS11415	SM00824	Thioesterase
CA733_RS11430	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS11430	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS11430	SM00387	Histidine kinase-like ATPases
CA733_RS11430	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS11430	SM00448	cheY-homologous receiver domain
CA733_RS11485	SM00091	PAS domain
CA733_RS11485	SM00419	helix_turn_helix, cAMP Regulatory protein
CA733_RS11490	SM00382	ATPases associated with a variety of cellular activities
CA733_RS11500	SM00382	ATPases associated with a variety of cellular activities
CA733_RS11510	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS11610	SM00421	helix_turn_helix, Lux Regulon
CA733_RS11610	SM00448	cheY-homologous receiver domain
CA733_RS11620	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS11620	SM01091	Transporter associated domain
CA733_RS11625	SM00487	DEAD-like helicases superfamily
CA733_RS11625	SM00490	helicase superfamily c-terminal domain
CA733_RS11625	SM00982	CA733_RS11625
CA733_RS11625	SM01058	CarD-like/TRCF domain
CA733_RS11660	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CA733_RS11715	SM00382	ATPases associated with a variety of cellular activities
CA733_RS11725	SM00347	helix_turn_helix multiple antibiotic resistance protein
CA733_RS11755	SM00382	ATPases associated with a variety of cellular activities
CA733_RS11765	SM00382	ATPases associated with a variety of cellular activities
CA733_RS11815	SM00382	ATPases associated with a variety of cellular activities
CA733_RS11840	SM00382	ATPases associated with a variety of cellular activities
CA733_RS11850	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS11905	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS11905	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS11905	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS11905	SM00387	Histidine kinase-like ATPases
CA733_RS11950	SM00831	Cation transporter/ATPase, N-terminus
CA733_RS11965	SM00448	cheY-homologous receiver domain
CA733_RS11965	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS11970	SM00387	Histidine kinase-like ATPases
CA733_RS11970	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS11975	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CA733_RS12010	SM00838	Elongation factor G C-terminus
CA733_RS12010	SM00889	Elongation factor G, domain IV
CA733_RS12025	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS12105	SM00650	Ribosomal RNA adenine dimethylases
CA733_RS12125	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS12125	SM00091	PAS domain
CA733_RS12125	SM00387	Histidine kinase-like ATPases
CA733_RS12125	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS12150	SM00387	Histidine kinase-like ATPases
CA733_RS12150	SM00448	cheY-homologous receiver domain
CA733_RS12155	SM00387	Histidine kinase-like ATPases
CA733_RS12155	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS12155	SM00448	cheY-homologous receiver domain
CA733_RS12165	SM00849	Metallo-beta-lactamase superfamily
CA733_RS12220	SM00091	PAS domain
CA733_RS12220	SM00387	Histidine kinase-like ATPases
CA733_RS12220	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS12220	SM00448	cheY-homologous receiver domain
CA733_RS12230	SM00382	ATPases associated with a variety of cellular activities
CA733_RS12230	SM01086	C-terminal, D2-small domain, of ClpB protein
CA733_RS12245	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CA733_RS12285	SM00387	Histidine kinase-like ATPases
CA733_RS12290	SM00421	helix_turn_helix, Lux Regulon
CA733_RS12290	SM00448	cheY-homologous receiver domain
CA733_RS12340	SM00028	Tetratricopeptide repeats
CA733_RS12345	SM00912	haemagglutination activity domain
CA733_RS12350	SM00912	haemagglutination activity domain
CA733_RS12370	SM00320	WD40 repeats
CA733_RS12395	SM00912	haemagglutination activity domain
CA733_RS12400	SM00912	haemagglutination activity domain
CA733_RS12410	SM01080	CA733_RS12410
CA733_RS12430	SM00028	Tetratricopeptide repeats
CA733_RS12465	SM00450	Rhodanese Homology Domain
CA733_RS12475	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CA733_RS12495	SM00849	Metallo-beta-lactamase superfamily
CA733_RS12505	SM00450	Rhodanese Homology Domain
CA733_RS12530	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CA733_RS12535	SM00320	WD40 repeats
CA733_RS12555	SM00448	cheY-homologous receiver domain
CA733_RS12555	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS12575	SM00028	Tetratricopeptide repeats
CA733_RS12645	SM00382	ATPases associated with a variety of cellular activities
CA733_RS12685	SM00387	Histidine kinase-like ATPases
CA733_RS12685	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS12685	SM00448	cheY-homologous receiver domain
CA733_RS12690	SM00387	Histidine kinase-like ATPases
CA733_RS12690	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS12690	SM00448	cheY-homologous receiver domain
CA733_RS12705	SM00645	Papain family cysteine protease
CA733_RS12745	SM01400	CA733_RS12745
CA733_RS12755	SM00028	Tetratricopeptide repeats
CA733_RS12805	SM00710	Parallel beta-helix repeats
CA733_RS12810	SM00710	Parallel beta-helix repeats
CA733_RS12815	SM00382	ATPases associated with a variety of cellular activities
CA733_RS12845	SM00028	Tetratricopeptide repeats
CA733_RS12895	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS12935	SM00387	Histidine kinase-like ATPases
CA733_RS12935	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS12955	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS12980	SM00829	Enoylreductase
CA733_RS12990	SM00382	ATPases associated with a variety of cellular activities
CA733_RS13000	SM00448	cheY-homologous receiver domain
CA733_RS13000	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS13030	SM00823	Phosphopantetheine attachment site
CA733_RS13040	SM00825	Beta-ketoacyl synthase
CA733_RS13040	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CA733_RS13045	SM00825	Beta-ketoacyl synthase
CA733_RS13050	SM00822	CA733_RS13050
CA733_RS13055	SM00825	Beta-ketoacyl synthase
CA733_RS13055	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CA733_RS13070	SM00028	Tetratricopeptide repeats
CA733_RS13085	SM00470	ParB-like nuclease domain
CA733_RS13205	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS13225	SM00567	E-Z type HEAT repeats
CA733_RS13235	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS13245	SM00420	helix_turn_helix, Deoxyribose operon repressor
CA733_RS13245	SM01134	CA733_RS13245
CA733_RS13250	SM00861	Transketolase, pyrimidine binding domain
CA733_RS13275	SM00855	Phosphoglycerate mutase family
CA733_RS13280	SM00930	CA733_RS13280
CA733_RS13305	SM00642	Alpha-amylase domain
CA733_RS13345	SM01236	CA733_RS13345
CA733_RS13385	SM00028	Tetratricopeptide repeats
CA733_RS13385	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS13385	SM00091	PAS domain
CA733_RS13385	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS13385	SM00387	Histidine kinase-like ATPases
CA733_RS13400	SM00382	ATPases associated with a variety of cellular activities
CA733_RS13400	SM01086	C-terminal, D2-small domain, of ClpB protein
CA733_RS13470	SM00633	Glycosyl hydrolase family 10
CA733_RS13480	SM00710	Parallel beta-helix repeats
CA733_RS13510	SM00861	Transketolase, pyrimidine binding domain
CA733_RS13515	SM00825	Beta-ketoacyl synthase
CA733_RS13520	SM00823	Phosphopantetheine attachment site
CA733_RS13540	SM00387	Histidine kinase-like ATPases
CA733_RS13550	SM00073	Histidine Phosphotransfer domain
CA733_RS13550	SM00260	Two component signalling adaptor domain
CA733_RS13550	SM00387	Histidine kinase-like ATPases
CA733_RS13550	SM00448	cheY-homologous receiver domain
CA733_RS13550	SM01231	CA733_RS13550
CA733_RS13555	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS13555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CA733_RS13560	SM00260	Two component signalling adaptor domain
CA733_RS13565	SM00448	cheY-homologous receiver domain
CA733_RS13570	SM00448	cheY-homologous receiver domain
CA733_RS13600	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS13600	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS13600	SM00091	PAS domain
CA733_RS13600	SM00387	Histidine kinase-like ATPases
CA733_RS13600	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS13600	SM00448	cheY-homologous receiver domain
CA733_RS13645	SM00382	ATPases associated with a variety of cellular activities
CA733_RS13685	SM00014	Acid phosphatase homologues
CA733_RS13695	SM00244	prohibitin homologues
CA733_RS13725	SM00382	ATPases associated with a variety of cellular activities
CA733_RS13745	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CA733_RS13770	SM00320	WD40 repeats
CA733_RS13790	SM00382	ATPases associated with a variety of cellular activities
CA733_RS13810	SM00382	ATPases associated with a variety of cellular activities
CA733_RS13815	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CA733_RS13815	SM00091	PAS domain
CA733_RS13880	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS13885	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS14030	SM00014	Acid phosphatase homologues
CA733_RS14035	SM00342	helix_turn_helix, arabinose operon control protein
CA733_RS14095	SM00421	helix_turn_helix, Lux Regulon
CA733_RS14095	SM00448	cheY-homologous receiver domain
CA733_RS14100	SM00382	ATPases associated with a variety of cellular activities
CA733_RS14105	SM00382	ATPases associated with a variety of cellular activities
CA733_RS14115	SM00028	Tetratricopeptide repeats
CA733_RS14115	SM00671	Sel1-like repeats.
CA733_RS14120	SM00028	Tetratricopeptide repeats
CA733_RS14120	SM00671	Sel1-like repeats.
CA733_RS14125	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS14125	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS14125	SM00387	Histidine kinase-like ATPases
CA733_RS14125	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS14140	SM00947	Carbonic anhydrase
CA733_RS14175	SM00387	Histidine kinase-like ATPases
CA733_RS14175	SM00448	cheY-homologous receiver domain
CA733_RS14180	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS14180	SM00091	PAS domain
CA733_RS14180	SM00387	Histidine kinase-like ATPases
CA733_RS14180	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS14180	SM00448	cheY-homologous receiver domain
CA733_RS14210	SM00387	Histidine kinase-like ATPases
CA733_RS14210	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS14220	SM00448	cheY-homologous receiver domain
CA733_RS14220	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS14305	SM00851	MGS-like domain
CA733_RS14305	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CA733_RS14325	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS14330	SM00567	E-Z type HEAT repeats
CA733_RS14350	SM00448	cheY-homologous receiver domain
CA733_RS14350	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS14355	SM00382	ATPases associated with a variety of cellular activities
CA733_RS14390	SM00322	K homology RNA-binding domain
CA733_RS14415	SM00710	Parallel beta-helix repeats
CA733_RS14435	SM01007	Class II Aldolase and Adducin N-terminal domain
CA733_RS14465	SM00387	Histidine kinase-like ATPases
CA733_RS14465	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS14465	SM01248	CA733_RS14465
CA733_RS14470	SM00267	diguanylate cyclase
CA733_RS14470	SM00448	cheY-homologous receiver domain
CA733_RS14495	SM00448	cheY-homologous receiver domain
CA733_RS14505	SM00387	Histidine kinase-like ATPases
CA733_RS14505	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS14515	SM00028	Tetratricopeptide repeats
CA733_RS14545	SM00450	Rhodanese Homology Domain
CA733_RS14555	SM00487	DEAD-like helicases superfamily
CA733_RS14555	SM00490	helicase superfamily c-terminal domain
CA733_RS14575	SM00421	helix_turn_helix, Lux Regulon
CA733_RS14575	SM00448	cheY-homologous receiver domain
CA733_RS14610	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS14610	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CA733_RS14635	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS14635	SM00421	helix_turn_helix, Lux Regulon
CA733_RS14645	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS14645	SM00421	helix_turn_helix, Lux Regulon
CA733_RS14705	SM01209	CA733_RS14705
CA733_RS14705	SM01210	CA733_RS14705
CA733_RS14755	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS14755	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS14755	SM00091	PAS domain
CA733_RS14755	SM00387	Histidine kinase-like ATPases
CA733_RS14755	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS14755	SM00448	cheY-homologous receiver domain
CA733_RS14780	SM00320	WD40 repeats
CA733_RS14790	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS14790	SM00924	MgtE intracellular N domain
CA733_RS14810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CA733_RS14850	SM00257	Lysin motif
CA733_RS14915	SM00881	CoA binding domain
CA733_RS14925	SM00642	Alpha-amylase domain
CA733_RS14960	SM00382	ATPases associated with a variety of cellular activities
CA733_RS14970	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS14970	SM01093	CA733_RS14970
CA733_RS14980	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS14980	SM00387	Histidine kinase-like ATPases
CA733_RS14985	SM00240	Forkhead associated domain
CA733_RS14985	SM00382	ATPases associated with a variety of cellular activities
CA733_RS14990	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS15020	SM00947	Carbonic anhydrase
CA733_RS15055	SM00387	Histidine kinase-like ATPases
CA733_RS15055	SM00448	cheY-homologous receiver domain
CA733_RS15060	SM00387	Histidine kinase-like ATPases
CA733_RS15060	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS15060	SM00448	cheY-homologous receiver domain
CA733_RS15070	SM00342	helix_turn_helix, arabinose operon control protein
CA733_RS15100	SM00899	CA733_RS15100
CA733_RS15160	SM00857	Resolvase, N terminal domain
CA733_RS15235	SM00382	ATPases associated with a variety of cellular activities
CA733_RS15255	SM00912	haemagglutination activity domain
CA733_RS15260	SM00028	Tetratricopeptide repeats
CA733_RS15270	SM00912	haemagglutination activity domain
CA733_RS15275	SM01080	CA733_RS15275
CA733_RS15280	SM00448	cheY-homologous receiver domain
CA733_RS15375	SM00248	ankyrin repeats
CA733_RS15470	SM00257	Lysin motif
CA733_RS15475	SM00257	Lysin motif
CA733_RS15480	SM00710	Parallel beta-helix repeats
CA733_RS15535	SM00830	Chorismate mutase type II
CA733_RS15540	SM00320	WD40 repeats
CA733_RS15560	SM00822	CA733_RS15560
CA733_RS15595	SM00421	helix_turn_helix, Lux Regulon
CA733_RS15595	SM00448	cheY-homologous receiver domain
CA733_RS15600	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS15600	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS15600	SM00091	PAS domain
CA733_RS15600	SM00387	Histidine kinase-like ATPases
CA733_RS15640	SM00237	Domains in Na-Ca exchangers and integrin-beta4
CA733_RS15690	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS15760	SM00382	ATPases associated with a variety of cellular activities
CA733_RS15870	SM00829	Enoylreductase
CA733_RS15920	SM00567	E-Z type HEAT repeats
CA733_RS15960	SM00567	E-Z type HEAT repeats
CA733_RS15985	SM00448	cheY-homologous receiver domain
CA733_RS15985	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS15990	SM00448	cheY-homologous receiver domain
CA733_RS15995	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS15995	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS15995	SM00091	PAS domain
CA733_RS15995	SM00387	Histidine kinase-like ATPases
CA733_RS15995	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS16035	SM00248	ankyrin repeats
CA733_RS16040	SM01094	CpcD/allophycocyanin linker domain
CA733_RS16045	SM01094	CpcD/allophycocyanin linker domain
CA733_RS16050	SM01094	CpcD/allophycocyanin linker domain
CA733_RS16070	SM00822	CA733_RS16070
CA733_RS16080	SM00567	E-Z type HEAT repeats
CA733_RS16090	SM00567	E-Z type HEAT repeats
CA733_RS16125	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS16165	SM00320	WD40 repeats
CA733_RS16185	SM01080	CA733_RS16185
CA733_RS16200	SM00912	haemagglutination activity domain
CA733_RS16205	SM00912	haemagglutination activity domain
CA733_RS16215	SM00382	ATPases associated with a variety of cellular activities
CA733_RS16230	SM00912	haemagglutination activity domain
CA733_RS16240	SM00028	Tetratricopeptide repeats
CA733_RS16255	SM00822	CA733_RS16255
CA733_RS16280	SM00849	Metallo-beta-lactamase superfamily
CA733_RS16330	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS16340	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS16375	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS16390	SM00185	Armadillo/beta-catenin-like repeats
CA733_RS16390	SM00567	E-Z type HEAT repeats
CA733_RS16475	SM00829	Enoylreductase
CA733_RS16505	SM00382	ATPases associated with a variety of cellular activities
CA733_RS16545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS16545	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS16545	SM00387	Histidine kinase-like ATPases
CA733_RS16580	SM00382	ATPases associated with a variety of cellular activities
CA733_RS16620	SM00899	CA733_RS16620
CA733_RS16635	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS16635	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS16635	SM00387	Histidine kinase-like ATPases
CA733_RS16660	SM00823	Phosphopantetheine attachment site
CA733_RS16675	SM00823	Phosphopantetheine attachment site
CA733_RS16680	SM00823	Phosphopantetheine attachment site
CA733_RS16685	SM00823	Phosphopantetheine attachment site
CA733_RS16710	SM00923	MbtH-like protein
CA733_RS16715	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS16715	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS16715	SM00387	Histidine kinase-like ATPases
CA733_RS16810	SM00857	Resolvase, N terminal domain
CA733_RS16825	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS16830	SM00260	Two component signalling adaptor domain
CA733_RS16835	SM00073	Histidine Phosphotransfer domain
CA733_RS16835	SM00260	Two component signalling adaptor domain
CA733_RS16835	SM00387	Histidine kinase-like ATPases
CA733_RS16835	SM00448	cheY-homologous receiver domain
CA733_RS16835	SM01231	CA733_RS16835
CA733_RS16840	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS16840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CA733_RS16840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS16845	SM00260	Two component signalling adaptor domain
CA733_RS16850	SM00448	cheY-homologous receiver domain
CA733_RS16855	SM00448	cheY-homologous receiver domain
CA733_RS16875	SM00382	ATPases associated with a variety of cellular activities
CA733_RS16895	SM00382	ATPases associated with a variety of cellular activities
CA733_RS16920	SM00028	Tetratricopeptide repeats
CA733_RS16920	SM00320	WD40 repeats
CA733_RS16960	SM00857	Resolvase, N terminal domain
CA733_RS16970	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS16970	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS16970	SM00387	Histidine kinase-like ATPases
CA733_RS16970	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS16970	SM00448	cheY-homologous receiver domain
CA733_RS16975	SM00448	cheY-homologous receiver domain
CA733_RS17050	SM00382	ATPases associated with a variety of cellular activities
CA733_RS17055	SM00382	ATPases associated with a variety of cellular activities
CA733_RS17065	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS17070	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CA733_RS17070	SM00448	cheY-homologous receiver domain
CA733_RS17075	SM00448	cheY-homologous receiver domain
CA733_RS17080	SM00073	Histidine Phosphotransfer domain
CA733_RS17080	SM00260	Two component signalling adaptor domain
CA733_RS17080	SM00387	Histidine kinase-like ATPases
CA733_RS17080	SM00448	cheY-homologous receiver domain
CA733_RS17085	SM00260	Two component signalling adaptor domain
CA733_RS17090	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CA733_RS17090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS17095	SM00028	Tetratricopeptide repeats
CA733_RS17095	SM00138	Methyltransferase, chemotaxis proteins 
CA733_RS17100	SM00260	Two component signalling adaptor domain
CA733_RS17125	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS17140	SM00829	Enoylreductase
CA733_RS17315	SM00877	CA733_RS17315
CA733_RS17375	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS17415	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS17445	SM00823	Phosphopantetheine attachment site
CA733_RS17450	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS17450	SM00387	Histidine kinase-like ATPases
CA733_RS17500	SM00028	Tetratricopeptide repeats
CA733_RS17505	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS17515	SM00287	Bacterial SH3 domain homologues
CA733_RS17520	SM00287	Bacterial SH3 domain homologues
CA733_RS17535	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS17535	SM00387	Histidine kinase-like ATPases
CA733_RS17535	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS17595	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS17595	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS17615	SM00421	helix_turn_helix, Lux Regulon
CA733_RS17615	SM00448	cheY-homologous receiver domain
CA733_RS17620	SM00226	Low molecular weight phosphatase family
CA733_RS17645	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CA733_RS17665	SM00841	Elongation factor P, C-terminal
CA733_RS17665	SM01185	CA733_RS17665
CA733_RS17675	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CA733_RS17680	SM00909	Sporulation and spore germination
CA733_RS17690	SM00563	Phosphate acyltransferases
CA733_RS17700	SM00567	E-Z type HEAT repeats
CA733_RS17700	SM00860	SMI1 / KNR4 family
CA733_RS17760	SM00507	HNH nucleases
CA733_RS17870	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS17870	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS17870	SM00091	PAS domain
CA733_RS17870	SM00387	Histidine kinase-like ATPases
CA733_RS17870	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS17875	SM00448	cheY-homologous receiver domain
CA733_RS17880	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS17880	SM00091	PAS domain
CA733_RS17880	SM00387	Histidine kinase-like ATPases
CA733_RS17880	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS17880	SM00448	cheY-homologous receiver domain
CA733_RS17885	SM00736	Dystroglycan-type cadherin-like domains.
CA733_RS17900	SM00382	ATPases associated with a variety of cellular activities
CA733_RS17970	SM00240	Forkhead associated domain
CA733_RS18065	SM00959	Rho termination factor, N-terminal domain
CA733_RS18090	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS18090	SM00387	Histidine kinase-like ATPases
CA733_RS18090	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS18095	SM00480	DNA polymerase III beta subunit
CA733_RS18100	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS18115	SM00360	RNA recognition motif
CA733_RS18120	SM00382	ATPases associated with a variety of cellular activities
CA733_RS18120	SM00760	Bacterial dnaA protein helix-turn-helix domain
CA733_RS18125	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS18200	SM01094	CpcD/allophycocyanin linker domain
CA733_RS18250	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS18260	SM00861	Transketolase, pyrimidine binding domain
CA733_RS18270	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS18270	SM00091	PAS domain
CA733_RS18270	SM00387	Histidine kinase-like ATPases
CA733_RS18275	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS18275	SM00091	PAS domain
CA733_RS18275	SM00387	Histidine kinase-like ATPases
CA733_RS18275	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS18275	SM00448	cheY-homologous receiver domain
CA733_RS18285	SM00320	WD40 repeats
CA733_RS18300	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CA733_RS18300	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CA733_RS18310	SM00382	ATPases associated with a variety of cellular activities
CA733_RS18360	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS18360	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CA733_RS18370	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS18370	SM00710	Parallel beta-helix repeats
CA733_RS18420	SM00838	Elongation factor G C-terminus
CA733_RS18430	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS18430	SM00387	Histidine kinase-like ATPases
CA733_RS18430	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS18480	SM00320	WD40 repeats
CA733_RS18485	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS18485	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS18485	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS18485	SM00387	Histidine kinase-like ATPases
CA733_RS18495	SM00854	Bacterial capsule synthesis protein PGA_cap
CA733_RS18595	SM00387	Histidine kinase-like ATPases
CA733_RS18645	SM00185	Armadillo/beta-catenin-like repeats
CA733_RS18645	SM00567	E-Z type HEAT repeats
CA733_RS18650	SM00382	ATPases associated with a variety of cellular activities
CA733_RS18650	SM00567	E-Z type HEAT repeats
CA733_RS18670	SM00028	Tetratricopeptide repeats
CA733_RS18675	SM00382	ATPases associated with a variety of cellular activities
CA733_RS18765	SM00387	Histidine kinase-like ATPases
CA733_RS18800	SM00823	Phosphopantetheine attachment site
CA733_RS18810	SM00823	Phosphopantetheine attachment site
CA733_RS18825	SM00825	Beta-ketoacyl synthase
CA733_RS18825	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CA733_RS18830	SM00823	Phosphopantetheine attachment site
CA733_RS18830	SM01294	CA733_RS18830
CA733_RS18855	SM00382	ATPases associated with a variety of cellular activities
CA733_RS18870	SM00642	Alpha-amylase domain
CA733_RS18875	SM00642	Alpha-amylase domain
CA733_RS18885	SM00255	Toll - interleukin 1 - resistance
CA733_RS18885	SM00320	WD40 repeats
CA733_RS18890	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CA733_RS18900	SM00342	helix_turn_helix, arabinose operon control protein
CA733_RS18905	SM00028	Tetratricopeptide repeats
CA733_RS19055	SM00028	Tetratricopeptide repeats
CA733_RS19055	SM00271	DnaJ molecular chaperone homology domain
CA733_RS19060	SM00028	Tetratricopeptide repeats
CA733_RS19060	SM00271	DnaJ molecular chaperone homology domain
CA733_RS19060	SM00320	WD40 repeats
CA733_RS19090	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS19090	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS19090	SM00091	PAS domain
CA733_RS19090	SM00387	Histidine kinase-like ATPases
CA733_RS19090	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS19090	SM00448	cheY-homologous receiver domain
CA733_RS19125	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS19160	SM00382	ATPases associated with a variety of cellular activities
CA733_RS19180	SM00474	3'-5' exonuclease
CA733_RS19185	SM00450	Rhodanese Homology Domain
CA733_RS19190	SM00448	cheY-homologous receiver domain
CA733_RS19190	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS19235	SM00028	Tetratricopeptide repeats
CA733_RS19255	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CA733_RS19265	SM00986	Uracil DNA glycosylase superfamily
CA733_RS19265	SM00987	UreE urease accessory protein, C-terminal domain 
CA733_RS19270	SM00028	Tetratricopeptide repeats
CA733_RS19390	SM00028	Tetratricopeptide repeats
CA733_RS19410	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CA733_RS19410	SM01080	CA733_RS19410
CA733_RS19415	SM00347	helix_turn_helix multiple antibiotic resistance protein
CA733_RS19435	SM00996	S-adenosyl-L-homocysteine hydrolase
CA733_RS19435	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CA733_RS19445	SM00465	GIY-YIG type nucleases (URI domain)
CA733_RS19480	SM00448	cheY-homologous receiver domain
CA733_RS19480	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS19495	SM00798	AICARFT/IMPCHase bienzyme
CA733_RS19495	SM00851	MGS-like domain
CA733_RS19535	SM00988	UreE urease accessory protein, N-terminal domain
CA733_RS19560	SM00327	von Willebrand factor (vWF) type A domain
CA733_RS19560	SM00609	Vault protein Inter-alpha-Trypsin domain
CA733_RS19585	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS19585	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS19585	SM00387	Histidine kinase-like ATPases
CA733_RS19585	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS19585	SM00448	cheY-homologous receiver domain
CA733_RS19590	SM00138	Methyltransferase, chemotaxis proteins 
CA733_RS19600	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS19600	SM00091	PAS domain
CA733_RS19600	SM00387	Histidine kinase-like ATPases
CA733_RS19600	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS19600	SM00448	cheY-homologous receiver domain
CA733_RS19610	SM00912	haemagglutination activity domain
CA733_RS19625	SM00382	ATPases associated with a variety of cellular activities
CA733_RS19640	SM00487	DEAD-like helicases superfamily
CA733_RS19640	SM00490	helicase superfamily c-terminal domain
CA733_RS19730	SM00852	Probable molybdopterin binding domain
CA733_RS19750	SM00382	ATPases associated with a variety of cellular activities
CA733_RS19760	SM00382	ATPases associated with a variety of cellular activities
CA733_RS19770	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CA733_RS19785	SM00382	ATPases associated with a variety of cellular activities
CA733_RS19860	SM00831	Cation transporter/ATPase, N-terminus
CA733_RS19865	SM00028	Tetratricopeptide repeats
CA733_RS19870	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS19905	SM00382	ATPases associated with a variety of cellular activities
CA733_RS19920	SM00360	RNA recognition motif
CA733_RS20020	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS20020	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CA733_RS20050	SM00382	ATPases associated with a variety of cellular activities
CA733_RS20105	SM00487	DEAD-like helicases superfamily
CA733_RS20145	SM00354	helix_turn _helix lactose operon repressor
CA733_RS20160	SM00822	CA733_RS20160
CA733_RS20175	SM00506	Appr-1"-p processing enzyme
CA733_RS20205	SM00347	helix_turn_helix multiple antibiotic resistance protein
CA733_RS20220	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS20225	SM00670	Large family of predicted nucleotide-binding domains
CA733_RS20255	SM00327	von Willebrand factor (vWF) type A domain
CA733_RS20260	SM00327	von Willebrand factor (vWF) type A domain
CA733_RS20275	SM00271	DnaJ molecular chaperone homology domain
CA733_RS20285	SM00382	ATPases associated with a variety of cellular activities
CA733_RS20355	SM00028	Tetratricopeptide repeats
CA733_RS20385	SM00028	Tetratricopeptide repeats
CA733_RS20430	SM00710	Parallel beta-helix repeats
CA733_RS20440	SM00028	Tetratricopeptide repeats
CA733_RS20475	SM00434	DNA Topoisomerase IV
CA733_RS20495	SM00448	cheY-homologous receiver domain
CA733_RS20510	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS20510	SM00091	PAS domain
CA733_RS20510	SM00387	Histidine kinase-like ATPases
CA733_RS20510	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS20510	SM00448	cheY-homologous receiver domain
CA733_RS20515	SM00267	diguanylate cyclase
CA733_RS20515	SM00448	cheY-homologous receiver domain
CA733_RS20515	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS20520	SM00382	ATPases associated with a variety of cellular activities
CA733_RS20555	SM00710	Parallel beta-helix repeats
CA733_RS20590	SM00448	cheY-homologous receiver domain
CA733_RS20640	SM00248	ankyrin repeats
CA733_RS20705	SM00382	ATPases associated with a variety of cellular activities
CA733_RS20725	SM00028	Tetratricopeptide repeats
CA733_RS20755	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CA733_RS20795	SM00028	Tetratricopeptide repeats
CA733_RS20850	SM00448	cheY-homologous receiver domain
CA733_RS20985	SM00642	Alpha-amylase domain
CA733_RS20985	SM01065	Starch binding domain
CA733_RS21035	SM00320	WD40 repeats
CA733_RS21050	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS21055	SM00448	cheY-homologous receiver domain
CA733_RS21065	SM01329	CA733_RS21065
CA733_RS21075	SM00382	ATPases associated with a variety of cellular activities
CA733_RS21200	SM00382	ATPases associated with a variety of cellular activities
CA733_RS21270	SM00138	Methyltransferase, chemotaxis proteins 
CA733_RS21275	SM00448	cheY-homologous receiver domain
CA733_RS21280	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CA733_RS21280	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS21285	SM00260	Two component signalling adaptor domain
CA733_RS21290	SM00073	Histidine Phosphotransfer domain
CA733_RS21290	SM00260	Two component signalling adaptor domain
CA733_RS21290	SM00387	Histidine kinase-like ATPases
CA733_RS21290	SM01231	CA733_RS21290
CA733_RS21300	SM00448	cheY-homologous receiver domain
CA733_RS21310	SM00091	PAS domain
CA733_RS21310	SM00387	Histidine kinase-like ATPases
CA733_RS21310	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS21310	SM00448	cheY-homologous receiver domain
CA733_RS21360	SM00320	WD40 repeats
CA733_RS21430	SM00382	ATPases associated with a variety of cellular activities
CA733_RS21470	SM00028	Tetratricopeptide repeats
CA733_RS21540	SM00382	ATPases associated with a variety of cellular activities
CA733_RS21660	SM00382	ATPases associated with a variety of cellular activities
CA733_RS21675	SM00960	Roadblock/LC7 domain
CA733_RS21710	SM00382	ATPases associated with a variety of cellular activities
CA733_RS21710	SM00962	SRP54-type protein, GTPase domain
CA733_RS21710	SM00963	SRP54-type protein, helical bundle domain
CA733_RS21715	SM01011	Aminopeptidase P, N-terminal domain
CA733_RS21730	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS21805	SM00342	helix_turn_helix, arabinose operon control protein
CA733_RS21810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS21810	SM00387	Histidine kinase-like ATPases
CA733_RS21810	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS21815	SM00028	Tetratricopeptide repeats
CA733_RS21855	SM00470	ParB-like nuclease domain
CA733_RS21865	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS21875	SM00331	Sigma factor PP2C-like phosphatases
CA733_RS21875	SM00448	cheY-homologous receiver domain
CA733_RS21890	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS21895	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS21940	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS21940	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS21940	SM00387	Histidine kinase-like ATPases
CA733_RS21965	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS21965	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS21965	SM00091	PAS domain
CA733_RS21965	SM00387	Histidine kinase-like ATPases
CA733_RS21965	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS21990	SM01230	CA733_RS21990
CA733_RS22015	SM00387	Histidine kinase-like ATPases
CA733_RS22015	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS22015	SM00448	cheY-homologous receiver domain
CA733_RS22020	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS22020	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS22020	SM00091	PAS domain
CA733_RS22020	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS22020	SM00387	Histidine kinase-like ATPases
CA733_RS22045	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS22060	SM00448	cheY-homologous receiver domain
CA733_RS22065	SM00448	cheY-homologous receiver domain
CA733_RS22080	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS22110	SM00382	ATPases associated with a variety of cellular activities
CA733_RS22120	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS22120	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS22120	SM00387	Histidine kinase-like ATPases
CA733_RS22130	SM00382	ATPases associated with a variety of cellular activities
CA733_RS22130	SM00962	SRP54-type protein, GTPase domain
CA733_RS22265	SM00822	CA733_RS22265
CA733_RS22340	SM00028	Tetratricopeptide repeats
CA733_RS22370	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS22370	SM00091	PAS domain
CA733_RS22370	SM00387	Histidine kinase-like ATPases
CA733_RS22370	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS22375	SM00448	cheY-homologous receiver domain
CA733_RS22380	SM00387	Histidine kinase-like ATPases
CA733_RS22380	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS22380	SM00448	cheY-homologous receiver domain
CA733_RS22385	SM00052	Putative diguanylate phosphodiesterase
CA733_RS22385	SM00267	diguanylate cyclase
CA733_RS22390	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS22390	SM00387	Histidine kinase-like ATPases
CA733_RS22390	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS22395	SM00387	Histidine kinase-like ATPases
CA733_RS22395	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS22455	SM00507	HNH nucleases
CA733_RS22460	SM01005	Alanine racemase, C-terminal domain
CA733_RS22470	SM00448	cheY-homologous receiver domain
CA733_RS22475	SM00448	cheY-homologous receiver domain
CA733_RS22480	SM00260	Two component signalling adaptor domain
CA733_RS22485	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS22485	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CA733_RS22485	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS22490	SM00073	Histidine Phosphotransfer domain
CA733_RS22490	SM00260	Two component signalling adaptor domain
CA733_RS22490	SM00387	Histidine kinase-like ATPases
CA733_RS22490	SM00448	cheY-homologous receiver domain
CA733_RS22490	SM01231	CA733_RS22490
CA733_RS22500	SM00419	helix_turn_helix, cAMP Regulatory protein
CA733_RS22555	SM00014	Acid phosphatase homologues
CA733_RS22570	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS22570	SM00382	ATPases associated with a variety of cellular activities
CA733_RS22630	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS22630	SM00091	PAS domain
CA733_RS22630	SM00387	Histidine kinase-like ATPases
CA733_RS22630	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS22630	SM00448	cheY-homologous receiver domain
CA733_RS22650	SM00642	Alpha-amylase domain
CA733_RS22680	SM00028	Tetratricopeptide repeats
CA733_RS22705	SM00831	Cation transporter/ATPase, N-terminus
CA733_RS22710	SM00014	Acid phosphatase homologues
CA733_RS22745	SM01400	CA733_RS22745
CA733_RS22765	SM00382	ATPases associated with a variety of cellular activities
CA733_RS22795	SM00028	Tetratricopeptide repeats
CA733_RS22805	SM00421	helix_turn_helix, Lux Regulon
CA733_RS22810	SM00450	Rhodanese Homology Domain
CA733_RS22820	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS22825	SM00710	Parallel beta-helix repeats
CA733_RS22845	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS22850	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CA733_RS22850	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS22850	SM00240	Forkhead associated domain
CA733_RS22860	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS22860	SM00387	Histidine kinase-like ATPases
CA733_RS22860	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS22860	SM00448	cheY-homologous receiver domain
CA733_RS22870	SM00387	Histidine kinase-like ATPases
CA733_RS22870	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS22870	SM00448	cheY-homologous receiver domain
CA733_RS22875	SM00091	PAS domain
CA733_RS22875	SM00448	cheY-homologous receiver domain
CA733_RS22895	SM00320	WD40 repeats
CA733_RS22930	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS22940	SM00998	Adenylosuccinate lyase C-terminus
CA733_RS22950	SM00320	WD40 repeats
CA733_RS22985	SM00448	cheY-homologous receiver domain
CA733_RS22985	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS22990	SM00382	ATPases associated with a variety of cellular activities
CA733_RS23010	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS23055	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS23065	SM00316	Ribosomal protein S1-like RNA-binding domain
CA733_RS23085	SM00464	Found in ATP-dependent protease La (LON)
CA733_RS23090	SM01403	CA733_RS23090
CA733_RS23100	SM00838	Elongation factor G C-terminus
CA733_RS23100	SM00889	Elongation factor G, domain IV
CA733_RS23220	SM00829	Enoylreductase
CA733_RS23260	SM00341	Helicase and RNase D C-terminal
CA733_RS23260	SM00487	DEAD-like helicases superfamily
CA733_RS23260	SM00490	helicase superfamily c-terminal domain
CA733_RS23260	SM00956	CA733_RS23260
CA733_RS23340	SM00028	Tetratricopeptide repeats
CA733_RS23345	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS23345	SM00091	PAS domain
CA733_RS23345	SM00387	Histidine kinase-like ATPases
CA733_RS23345	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS23345	SM00448	cheY-homologous receiver domain
CA733_RS23425	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS23425	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS23425	SM00387	Histidine kinase-like ATPases
CA733_RS23465	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS23465	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS23465	SM00387	Histidine kinase-like ATPases
CA733_RS23470	SM00823	Phosphopantetheine attachment site
CA733_RS23505	SM00382	ATPases associated with a variety of cellular activities
CA733_RS23530	SM00382	ATPases associated with a variety of cellular activities
CA733_RS23555	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS23555	SM00091	PAS domain
CA733_RS23555	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS23555	SM00387	Histidine kinase-like ATPases
CA733_RS23555	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS23565	SM00448	cheY-homologous receiver domain
CA733_RS23570	SM00448	cheY-homologous receiver domain
CA733_RS23575	SM00448	cheY-homologous receiver domain
CA733_RS23575	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS23580	SM00360	RNA recognition motif
CA733_RS23600	SM01004	Delta-aminolevulinic acid dehydratase
CA733_RS23605	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS23610	SM00861	Transketolase, pyrimidine binding domain
CA733_RS23635	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS23695	SM00072	Guanylate kinase homologues.
CA733_RS23705	SM00460	Transglutaminase/protease-like homologues
CA733_RS23740	SM00646	CA733_RS23740
CA733_RS23745	SM00646	CA733_RS23745
CA733_RS23845	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS23850	SM00363	S4 RNA-binding domain
CA733_RS23850	SM01390	CA733_RS23850
CA733_RS23875	SM00829	Enoylreductase
CA733_RS23890	SM00448	cheY-homologous receiver domain
CA733_RS23890	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS23910	SM00387	Histidine kinase-like ATPases
CA733_RS23910	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS23910	SM00448	cheY-homologous receiver domain
CA733_RS23915	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS23915	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS23915	SM00091	PAS domain
CA733_RS23915	SM00387	Histidine kinase-like ATPases
CA733_RS23915	SM00448	cheY-homologous receiver domain
CA733_RS23920	SM00849	Metallo-beta-lactamase superfamily
CA733_RS23950	SM00382	ATPases associated with a variety of cellular activities
CA733_RS24055	SM00316	Ribosomal protein S1-like RNA-binding domain
CA733_RS24055	SM00732	Likely ribonuclease with RNase H fold.
CA733_RS24120	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS24120	SM00387	Histidine kinase-like ATPases
CA733_RS24120	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS24180	SM00831	Cation transporter/ATPase, N-terminus
CA733_RS24200	SM00909	Sporulation and spore germination
CA733_RS24210	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
CA733_RS24240	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CA733_RS24300	SM00881	CoA binding domain
CA733_RS24315	SM00073	Histidine Phosphotransfer domain
CA733_RS24315	SM00260	Two component signalling adaptor domain
CA733_RS24315	SM00387	Histidine kinase-like ATPases
CA733_RS24315	SM00448	cheY-homologous receiver domain
CA733_RS24315	SM01231	CA733_RS24315
CA733_RS24320	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CA733_RS24320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS24325	SM00260	Two component signalling adaptor domain
CA733_RS24330	SM00448	cheY-homologous receiver domain
CA733_RS24335	SM00448	cheY-homologous receiver domain
CA733_RS24380	SM00387	Histidine kinase-like ATPases
CA733_RS24390	SM00173	Ras subfamily of RAS small GTPases
CA733_RS24390	SM00174	Rho (Ras homology) subfamily of Ras-like small GTPases
CA733_RS24390	SM00175	Rab subfamily of small GTPases
CA733_RS24415	SM00382	ATPases associated with a variety of cellular activities
CA733_RS24430	SM00387	Histidine kinase-like ATPases
CA733_RS24430	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS24435	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CA733_RS24445	SM00358	Double-stranded RNA binding motif
CA733_RS24445	SM00535	Ribonuclease III family
CA733_RS24455	SM00327	von Willebrand factor (vWF) type A domain
CA733_RS24455	SM00382	ATPases associated with a variety of cellular activities
CA733_RS24510	SM01011	Aminopeptidase P, N-terminal domain
CA733_RS24515	SM00028	Tetratricopeptide repeats
CA733_RS24530	SM00507	HNH nucleases
CA733_RS24545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS24545	SM00387	Histidine kinase-like ATPases
CA733_RS24545	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS24615	SM00382	ATPases associated with a variety of cellular activities
CA733_RS24630	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS24635	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS24635	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS24635	SM00387	Histidine kinase-like ATPases
CA733_RS24640	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS24640	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS24640	SM00387	Histidine kinase-like ATPases
CA733_RS24645	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS24645	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS24645	SM00387	Histidine kinase-like ATPases
CA733_RS24650	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS24650	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS24650	SM00387	Histidine kinase-like ATPases
CA733_RS24655	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS24655	SM00387	Histidine kinase-like ATPases
CA733_RS24655	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS24660	SM00448	cheY-homologous receiver domain
CA733_RS24660	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS24670	SM00387	Histidine kinase-like ATPases
CA733_RS24670	SM00448	cheY-homologous receiver domain
CA733_RS24675	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS24675	SM00387	Histidine kinase-like ATPases
CA733_RS24675	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS24675	SM00448	cheY-homologous receiver domain
CA733_RS24680	SM00849	Metallo-beta-lactamase superfamily
CA733_RS24715	SM00947	Carbonic anhydrase
CA733_RS24730	SM01007	Class II Aldolase and Adducin N-terminal domain
CA733_RS24750	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS24750	SM00091	PAS domain
CA733_RS24750	SM00387	Histidine kinase-like ATPases
CA733_RS24750	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS24750	SM00448	cheY-homologous receiver domain
CA733_RS24760	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS24760	SM00387	Histidine kinase-like ATPases
CA733_RS24760	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS24765	SM00448	cheY-homologous receiver domain
CA733_RS24770	SM00387	Histidine kinase-like ATPases
CA733_RS24770	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS24770	SM00448	cheY-homologous receiver domain
CA733_RS24805	SM00062	Bacterial periplasmic substrate-binding proteins
CA733_RS24810	SM00028	Tetratricopeptide repeats
CA733_RS24825	SM01207	CA733_RS24825
CA733_RS24860	SM00947	Carbonic anhydrase
CA733_RS24865	SM00028	Tetratricopeptide repeats
CA733_RS24870	SM00382	ATPases associated with a variety of cellular activities
CA733_RS24955	SM00320	WD40 repeats
CA733_RS24975	SM00864	Tubulin/FtsZ family, GTPase domain
CA733_RS24975	SM00865	Tubulin/FtsZ family, C-terminal domain
CA733_RS24995	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
CA733_RS25010	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS25010	SM00245	tail specific protease
CA733_RS25040	SM00257	Lysin motif
CA733_RS25045	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS25090	SM00448	cheY-homologous receiver domain
CA733_RS25120	SM00411	bacterial (prokaryotic) histone like domain
CA733_RS25145	SM00478	endonuclease III
CA733_RS25145	SM00525	CA733_RS25145
CA733_RS25175	SM00185	Armadillo/beta-catenin-like repeats
CA733_RS25175	SM00567	E-Z type HEAT repeats
CA733_RS25220	SM00363	S4 RNA-binding domain
CA733_RS25240	SM00957	SecA DEAD-like domain
CA733_RS25240	SM00958	SecA preprotein cross-linking domain
CA733_RS25255	SM00904	Riboflavin kinase
CA733_RS25275	SM00487	DEAD-like helicases superfamily
CA733_RS25275	SM00490	helicase superfamily c-terminal domain
CA733_RS25285	SM00387	Histidine kinase-like ATPases
CA733_RS25290	SM00917	LeuA allosteric (dimerisation) domain
CA733_RS25305	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS25305	SM01080	CA733_RS25305
CA733_RS25310	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS25310	SM00091	PAS domain
CA733_RS25310	SM00387	Histidine kinase-like ATPases
CA733_RS25310	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS25310	SM00448	cheY-homologous receiver domain
CA733_RS25315	SM00448	cheY-homologous receiver domain
CA733_RS25340	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS25365	SM00226	Low molecular weight phosphatase family
CA733_RS25375	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CA733_RS25380	SM00448	cheY-homologous receiver domain
CA733_RS25380	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CA733_RS25390	SM00450	Rhodanese Homology Domain
CA733_RS25480	SM00028	Tetratricopeptide repeats
CA733_RS25535	SM00382	ATPases associated with a variety of cellular activities
CA733_RS25545	SM00028	Tetratricopeptide repeats
CA733_RS25560	SM00327	von Willebrand factor (vWF) type A domain
CA733_RS25565	SM00327	von Willebrand factor (vWF) type A domain
CA733_RS25570	SM00327	von Willebrand factor (vWF) type A domain
CA733_RS25595	SM00382	ATPases associated with a variety of cellular activities
CA733_RS25665	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS25675	SM00382	ATPases associated with a variety of cellular activities
CA733_RS25685	SM00244	prohibitin homologues
CA733_RS25740	SM00387	Histidine kinase-like ATPases
CA733_RS25740	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS25740	SM00448	cheY-homologous receiver domain
CA733_RS25755	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS25760	SM00448	cheY-homologous receiver domain
CA733_RS25790	SM00382	ATPases associated with a variety of cellular activities
CA733_RS25790	SM00567	E-Z type HEAT repeats
CA733_RS25795	SM00052	Putative diguanylate phosphodiesterase
CA733_RS25795	SM00267	diguanylate cyclase
CA733_RS25795	SM01080	CA733_RS25795
CA733_RS25810	SM00028	Tetratricopeptide repeats
CA733_RS25835	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS25850	SM01116	CA733_RS25850
CA733_RS25915	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CA733_RS26015	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS26015	SM00924	MgtE intracellular N domain
CA733_RS26020	SM00237	Domains in Na-Ca exchangers and integrin-beta4
CA733_RS26020	SM00560	LamG-like jellyroll fold domain
CA733_RS26080	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CA733_RS26090	SM00267	diguanylate cyclase
CA733_RS26105	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS26105	SM00091	PAS domain
CA733_RS26105	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS26105	SM00387	Histidine kinase-like ATPases
CA733_RS26110	SM00091	PAS domain
CA733_RS26110	SM00387	Histidine kinase-like ATPases
CA733_RS26110	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS26110	SM00448	cheY-homologous receiver domain
CA733_RS26135	SM00382	ATPases associated with a variety of cellular activities
CA733_RS26145	SM00028	Tetratricopeptide repeats
CA733_RS26200	SM00382	ATPases associated with a variety of cellular activities
CA733_RS26215	SM00028	Tetratricopeptide repeats
CA733_RS26220	SM00382	ATPases associated with a variety of cellular activities
CA733_RS26260	SM01080	CA733_RS26260
CA733_RS26270	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS26270	SM00387	Histidine kinase-like ATPases
CA733_RS26270	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS26295	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CA733_RS26305	SM00387	Histidine kinase-like ATPases
CA733_RS26305	SM00433	TopoisomeraseII
CA733_RS26325	SM00052	Putative diguanylate phosphodiesterase
CA733_RS26325	SM00267	diguanylate cyclase
CA733_RS26355	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS26355	SM00387	Histidine kinase-like ATPases
CA733_RS26355	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS26385	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS26390	SM00478	endonuclease III
CA733_RS26390	SM00525	CA733_RS26390
CA733_RS26420	SM00382	ATPases associated with a variety of cellular activities
CA733_RS26445	SM00271	DnaJ molecular chaperone homology domain
CA733_RS26480	SM00320	WD40 repeats
CA733_RS26490	SM00382	ATPases associated with a variety of cellular activities
CA733_RS26500	SM00890	Domain of unknown function
CA733_RS26525	SM00823	Phosphopantetheine attachment site
CA733_RS26535	SM00823	Phosphopantetheine attachment site
CA733_RS26550	SM00823	Phosphopantetheine attachment site
CA733_RS26580	SM00959	Rho termination factor, N-terminal domain
CA733_RS26590	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CA733_RS26605	SM00421	helix_turn_helix, Lux Regulon
CA733_RS26605	SM00448	cheY-homologous receiver domain
CA733_RS26610	SM00448	cheY-homologous receiver domain
CA733_RS26620	SM00138	Methyltransferase, chemotaxis proteins 
CA733_RS26625	SM00642	Alpha-amylase domain
CA733_RS26630	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS26630	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS26630	SM00387	Histidine kinase-like ATPases
CA733_RS26630	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS26630	SM00448	cheY-homologous receiver domain
CA733_RS26655	SM00387	Histidine kinase-like ATPases
CA733_RS26655	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS26655	SM00448	cheY-homologous receiver domain
CA733_RS26660	SM00421	helix_turn_helix, Lux Regulon
CA733_RS26660	SM00448	cheY-homologous receiver domain
CA733_RS26680	SM00052	Putative diguanylate phosphodiesterase
CA733_RS26680	SM00448	cheY-homologous receiver domain
CA733_RS26685	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS26685	SM00091	PAS domain
CA733_RS26685	SM00387	Histidine kinase-like ATPases
CA733_RS26685	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS26730	SM00091	PAS domain
CA733_RS26730	SM00419	helix_turn_helix, cAMP Regulatory protein
CA733_RS26735	SM00091	PAS domain
CA733_RS26735	SM00267	diguanylate cyclase
CA733_RS26735	SM01080	CA733_RS26735
CA733_RS26740	SM00756	CA733_RS26740
CA733_RS26755	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS26760	SM00487	DEAD-like helicases superfamily
CA733_RS26760	SM00490	helicase superfamily c-terminal domain
CA733_RS26815	SM00382	ATPases associated with a variety of cellular activities
CA733_RS26875	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS26975	SM00240	Forkhead associated domain
CA733_RS27010	SM00382	ATPases associated with a variety of cellular activities
CA733_RS27015	SM00487	DEAD-like helicases superfamily
CA733_RS27015	SM00490	helicase superfamily c-terminal domain
CA733_RS27025	SM00320	WD40 repeats
CA733_RS27030	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CA733_RS27045	SM01018	B12 binding domain
CA733_RS27100	SM00287	Bacterial SH3 domain homologues
CA733_RS27135	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS27135	SM00091	PAS domain
CA733_RS27135	SM00387	Histidine kinase-like ATPases
CA733_RS27170	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS27185	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CA733_RS27210	SM00642	Alpha-amylase domain
CA733_RS27210	SM01065	Starch binding domain
CA733_RS27225	SM00382	ATPases associated with a variety of cellular activities
CA733_RS27310	SM00382	ATPases associated with a variety of cellular activities
CA733_RS27325	SM00028	Tetratricopeptide repeats
CA733_RS27330	SM00448	cheY-homologous receiver domain
CA733_RS27335	SM00434	DNA Topoisomerase IV
CA733_RS27345	SM00387	Histidine kinase-like ATPases
CA733_RS27345	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS27345	SM00448	cheY-homologous receiver domain
CA733_RS27350	SM01247	CA733_RS27350
CA733_RS27355	SM01248	CA733_RS27355
CA733_RS27380	SM00363	S4 RNA-binding domain
CA733_RS27395	SM01266	CA733_RS27395
CA733_RS27400	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS27400	SM00091	PAS domain
CA733_RS27400	SM00267	diguanylate cyclase
CA733_RS27400	SM00448	cheY-homologous receiver domain
CA733_RS27405	SM00905	Dihydroneopterin aldolase
CA733_RS27470	SM00448	cheY-homologous receiver domain
CA733_RS27475	SM00465	GIY-YIG type nucleases (URI domain)
CA733_RS27485	SM00382	ATPases associated with a variety of cellular activities
CA733_RS27495	SM00831	Cation transporter/ATPase, N-terminus
CA733_RS27520	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS27520	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS27520	SM00387	Histidine kinase-like ATPases
CA733_RS27530	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CA733_RS27535	SM00840	CA733_RS27535
CA733_RS27605	SM00448	cheY-homologous receiver domain
CA733_RS27605	SM00862	Transcriptional regulatory protein, C terminal
CA733_RS27610	SM00091	PAS domain
CA733_RS27610	SM00387	Histidine kinase-like ATPases
CA733_RS27610	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS27620	SM00419	helix_turn_helix, cAMP Regulatory protein
CA733_RS27650	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS27665	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CA733_RS27665	SM00474	3'-5' exonuclease
CA733_RS27665	SM00475	5'-3' exonuclease
CA733_RS27665	SM00482	DNA polymerase A domain
CA733_RS27680	SM00836	DALR anticodon binding domain
CA733_RS27685	SM00419	helix_turn_helix, cAMP Regulatory protein
CA733_RS27700	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS27765	SM00460	Transglutaminase/protease-like homologues
CA733_RS27770	SM00831	Cation transporter/ATPase, N-terminus
CA733_RS27815	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS27815	SM00387	Histidine kinase-like ATPases
CA733_RS27815	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS27815	SM00448	cheY-homologous receiver domain
CA733_RS27820	SM00448	cheY-homologous receiver domain
CA733_RS27825	SM00387	Histidine kinase-like ATPases
CA733_RS27825	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS27825	SM00448	cheY-homologous receiver domain
CA733_RS27830	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS27830	SM00387	Histidine kinase-like ATPases
CA733_RS27830	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS27845	SM00382	ATPases associated with a variety of cellular activities
CA733_RS27935	SM00822	CA733_RS27935
CA733_RS27980	SM00316	Ribosomal protein S1-like RNA-binding domain
CA733_RS27980	SM00357	Cold shock protein domain
CA733_RS27980	SM00955	CA733_RS27980
CA733_RS28025	SM00562	CA733_RS28025
CA733_RS28040	SM00028	Tetratricopeptide repeats
CA733_RS28040	SM00320	WD40 repeats
CA733_RS28055	SM00028	Tetratricopeptide repeats
CA733_RS28090	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS28090	SM00419	helix_turn_helix, cAMP Regulatory protein
CA733_RS28135	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS28135	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS28135	SM00387	Histidine kinase-like ATPases
CA733_RS28135	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS28205	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS28245	SM00318	Staphylococcal nuclease homologues
CA733_RS28260	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS28260	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS28260	SM00091	PAS domain
CA733_RS28260	SM00387	Histidine kinase-like ATPases
CA733_RS28265	SM00091	PAS domain
CA733_RS28265	SM00387	Histidine kinase-like ATPases
CA733_RS28265	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS28265	SM00448	cheY-homologous receiver domain
CA733_RS28310	SM00606	Cellulose Binding Domain Type IV
CA733_RS28315	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS28355	SM00382	ATPases associated with a variety of cellular activities
CA733_RS28360	SM00028	Tetratricopeptide repeats
CA733_RS28385	SM00877	CA733_RS28385
CA733_RS28390	SM00877	CA733_RS28390
CA733_RS28400	SM00961	Ribulose bisphosphate carboxylase, small chain
CA733_RS28410	SM00877	CA733_RS28410
CA733_RS28465	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS28465	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS28465	SM00091	PAS domain
CA733_RS28465	SM00387	Histidine kinase-like ATPases
CA733_RS28465	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS28465	SM00448	cheY-homologous receiver domain
CA733_RS28480	SM00563	Phosphate acyltransferases
CA733_RS28495	SM00872	Alpha mannosidase, middle domain
CA733_RS28555	SM00642	Alpha-amylase domain
CA733_RS28560	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CA733_RS28585	SM00912	haemagglutination activity domain
CA733_RS28605	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS28605	SM00267	diguanylate cyclase
CA733_RS28645	SM01248	CA733_RS28645
CA733_RS28675	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS28675	SM00091	PAS domain
CA733_RS28675	SM00387	Histidine kinase-like ATPases
CA733_RS28675	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS28675	SM00448	cheY-homologous receiver domain
CA733_RS28680	SM00788	Adenylosuccinate synthetase
CA733_RS28715	SM00331	Sigma factor PP2C-like phosphatases
CA733_RS28715	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CA733_RS28725	SM00244	prohibitin homologues
CA733_RS28740	SM01211	CA733_RS28740
CA733_RS28755	SM00883	Chaperonin 10 Kd subunit
CA733_RS28765	SM00421	helix_turn_helix, Lux Regulon
CA733_RS28765	SM00448	cheY-homologous receiver domain
CA733_RS28835	SM00271	DnaJ molecular chaperone homology domain
CA733_RS28865	SM00360	RNA recognition motif
CA733_RS28880	SM00014	Acid phosphatase homologues
CA733_RS28905	SM00347	helix_turn_helix multiple antibiotic resistance protein
CA733_RS28945	SM00933	CA733_RS28945
CA733_RS28950	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS28950	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS28950	SM00091	PAS domain
CA733_RS28950	SM00387	Histidine kinase-like ATPases
CA733_RS28950	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS28990	SM00641	Glycosyl hydrolases family 25
CA733_RS29075	SM00387	Histidine kinase-like ATPases
CA733_RS29075	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS29075	SM00448	cheY-homologous receiver domain
CA733_RS29125	SM00382	ATPases associated with a variety of cellular activities
CA733_RS29135	SM00849	Metallo-beta-lactamase superfamily
CA733_RS29140	SM01130	CA733_RS29140
CA733_RS29145	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CA733_RS29160	SM00382	ATPases associated with a variety of cellular activities
CA733_RS29160	SM00994	ClpX C4-type zinc finger
CA733_RS29160	SM01086	C-terminal, D2-small domain, of ClpB protein
CA733_RS29170	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CA733_RS29180	SM00316	Ribosomal protein S1-like RNA-binding domain
CA733_RS29200	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS29215	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS29280	SM01240	CA733_RS29280
CA733_RS29285	SM00463	Small MutS-related domain
CA733_RS29285	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CA733_RS29285	SM00534	ATPase domain of DNA mismatch repair MUTS family
CA733_RS29330	SM00267	diguanylate cyclase
CA733_RS29350	SM00248	ankyrin repeats
CA733_RS29385	SM00028	Tetratricopeptide repeats
CA733_RS29400	SM00450	Rhodanese Homology Domain
CA733_RS29420	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CA733_RS29445	SM00360	RNA recognition motif
CA733_RS29480	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS29530	SM00028	Tetratricopeptide repeats
CA733_RS29590	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CA733_RS29640	SM00306	Hint (Hedgehog/Intein) domain N-terminal region
CA733_RS29690	SM00382	ATPases associated with a variety of cellular activities
CA733_RS29735	SM00878	Biotin carboxylase C-terminal domain
CA733_RS29785	SM00387	Histidine kinase-like ATPases
CA733_RS29860	SM00382	ATPases associated with a variety of cellular activities
CA733_RS29860	SM00962	SRP54-type protein, GTPase domain
CA733_RS29860	SM00963	SRP54-type protein, helical bundle domain
CA733_RS29865	SM00331	Sigma factor PP2C-like phosphatases
CA733_RS29915	SM00382	ATPases associated with a variety of cellular activities
CA733_RS29935	SM00382	ATPases associated with a variety of cellular activities
CA733_RS29935	SM01086	C-terminal, D2-small domain, of ClpB protein
CA733_RS29945	SM01192	CA733_RS29945
CA733_RS29945	SM01193	CA733_RS29945
CA733_RS29950	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CA733_RS29960	SM00644	CA733_RS29960
CA733_RS29980	SM01234	CA733_RS29980
CA733_RS30015	SM00966	SpoVT / AbrB like domain 
CA733_RS30075	SM00710	Parallel beta-helix repeats
CA733_RS30185	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS30185	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS30185	SM00091	PAS domain
CA733_RS30185	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS30185	SM00387	Histidine kinase-like ATPases
CA733_RS30185	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS30185	SM00448	cheY-homologous receiver domain
CA733_RS30190	SM00567	E-Z type HEAT repeats
CA733_RS30215	SM00382	ATPases associated with a variety of cellular activities
CA733_RS30220	SM00382	ATPases associated with a variety of cellular activities
CA733_RS30230	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CA733_RS30250	SM00240	Forkhead associated domain
CA733_RS30265	SM00240	Forkhead associated domain
CA733_RS30270	SM00331	Sigma factor PP2C-like phosphatases
CA733_RS30270	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CA733_RS30285	SM00421	helix_turn_helix, Lux Regulon
CA733_RS30285	SM00448	cheY-homologous receiver domain
CA733_RS30295	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS30295	SM00245	tail specific protease
CA733_RS30310	SM00028	Tetratricopeptide repeats
CA733_RS30340	SM00382	ATPases associated with a variety of cellular activities
CA733_RS30375	SM00563	Phosphate acyltransferases
CA733_RS30410	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CA733_RS30415	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CA733_RS30425	SM00382	ATPases associated with a variety of cellular activities
CA733_RS30490	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CA733_RS30490	SM01232	CA733_RS30490
CA733_RS30515	SM00852	Probable molybdopterin binding domain
CA733_RS30535	SM00257	Lysin motif
CA733_RS30555	SM00382	ATPases associated with a variety of cellular activities
CA733_RS30575	SM00382	ATPases associated with a variety of cellular activities
CA733_RS30620	SM00507	HNH nucleases
CA733_RS30625	SM00487	DEAD-like helicases superfamily
CA733_RS30625	SM00490	helicase superfamily c-terminal domain
CA733_RS30725	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CA733_RS30725	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS30725	SM00387	Histidine kinase-like ATPases
CA733_RS30725	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS30725	SM00448	cheY-homologous receiver domain
CA733_RS30760	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS30760	SM00387	Histidine kinase-like ATPases
CA733_RS30760	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS30785	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CA733_RS30785	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CA733_RS30820	SM00393	Putative single-stranded nucleic acids-binding domain
CA733_RS30830	SM00382	ATPases associated with a variety of cellular activities
CA733_RS30850	SM00387	Histidine kinase-like ATPases
CA733_RS30850	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS30875	SM00563	Phosphate acyltransferases
CA733_RS30915	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CA733_RS30920	SM00563	Phosphate acyltransferases
CA733_RS30950	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CA733_RS31015	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS31055	SM01094	CpcD/allophycocyanin linker domain
CA733_RS31060	SM01094	CpcD/allophycocyanin linker domain
CA733_RS31065	SM01094	CpcD/allophycocyanin linker domain
CA733_RS31090	SM00567	E-Z type HEAT repeats
CA733_RS31100	SM01094	CpcD/allophycocyanin linker domain
CA733_RS31105	SM01094	CpcD/allophycocyanin linker domain
CA733_RS31110	SM01094	CpcD/allophycocyanin linker domain
CA733_RS31190	SM00382	ATPases associated with a variety of cellular activities
CA733_RS31235	SM00450	Rhodanese Homology Domain
CA733_RS31240	SM00853	MutL C terminal dimerisation domain
CA733_RS31240	SM01340	CA733_RS31240
CA733_RS31355	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CA733_RS31410	SM00271	DnaJ molecular chaperone homology domain
CA733_RS31440	SM00961	Ribulose bisphosphate carboxylase, small chain
CA733_RS31455	SM00961	Ribulose bisphosphate carboxylase, small chain
CA733_RS31520	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS31520	SM00320	WD40 repeats
CA733_RS31520	SM00564	beta-propeller repeat
CA733_RS31535	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS31535	SM00091	PAS domain
CA733_RS31535	SM00387	Histidine kinase-like ATPases
CA733_RS31535	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS31535	SM00448	cheY-homologous receiver domain
CA733_RS31540	SM00448	cheY-homologous receiver domain
CA733_RS31545	SM00421	helix_turn_helix, Lux Regulon
CA733_RS31545	SM00448	cheY-homologous receiver domain
CA733_RS31550	SM00387	Histidine kinase-like ATPases
CA733_RS31560	SM00822	CA733_RS31560
CA733_RS31595	SM00358	Double-stranded RNA binding motif
CA733_RS31595	SM00535	Ribonuclease III family
CA733_RS31605	SM00387	Histidine kinase-like ATPases
CA733_RS31605	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS31630	SM00567	E-Z type HEAT repeats
CA733_RS31655	SM00387	Histidine kinase-like ATPases
CA733_RS31655	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS31660	SM00382	ATPases associated with a variety of cellular activities
CA733_RS31745	SM00028	Tetratricopeptide repeats
CA733_RS31780	SM00244	prohibitin homologues
CA733_RS31795	SM00382	ATPases associated with a variety of cellular activities
CA733_RS31810	SM00100	Cyclic nucleotide-monophosphate binding domain
CA733_RS31810	SM00419	helix_turn_helix, cAMP Regulatory protein
CA733_RS31820	SM00732	Likely ribonuclease with RNase H fold.
CA733_RS31835	SM00316	Ribosomal protein S1-like RNA-binding domain
CA733_RS31835	SM00322	K homology RNA-binding domain
CA733_RS31845	SM00487	DEAD-like helicases superfamily
CA733_RS31845	SM00490	helicase superfamily c-terminal domain
CA733_RS31885	SM00825	Beta-ketoacyl synthase
CA733_RS31895	SM00044	Adenylyl- / guanylyl cyclase, catalytic domain
CA733_RS31895	SM01080	CA733_RS31895
CA733_RS31905	SM00028	Tetratricopeptide repeats
CA733_RS31905	SM00671	Sel1-like repeats.
CA733_RS31960	SM00642	Alpha-amylase domain
CA733_RS31970	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS31970	SM00331	Sigma factor PP2C-like phosphatases
CA733_RS32005	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CA733_RS32020	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS32155	SM00829	Enoylreductase
CA733_RS32170	SM00829	Enoylreductase
CA733_RS32215	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS32215	SM00387	Histidine kinase-like ATPases
CA733_RS32215	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS32220	SM00382	ATPases associated with a variety of cellular activities
CA733_RS32235	SM00382	ATPases associated with a variety of cellular activities
CA733_RS32330	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CA733_RS32355	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS32355	SM00387	Histidine kinase-like ATPases
CA733_RS32355	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS32400	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CA733_RS32400	SM00534	ATPase domain of DNA mismatch repair MUTS family
CA733_RS32405	SM00387	Histidine kinase-like ATPases
CA733_RS32550	SM00382	ATPases associated with a variety of cellular activities
CA733_RS32560	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS32575	SM00382	ATPases associated with a variety of cellular activities
CA733_RS32635	SM00917	LeuA allosteric (dimerisation) domain
CA733_RS32690	SM00822	CA733_RS32690
CA733_RS32730	SM00028	Tetratricopeptide repeats
CA733_RS32730	SM00320	WD40 repeats
CA733_RS32730	SM00564	beta-propeller repeat
CA733_RS32735	SM01133	CA733_RS32735
CA733_RS32760	SM01080	CA733_RS32760
CA733_RS32830	SM00028	Tetratricopeptide repeats
CA733_RS32835	SM00912	haemagglutination activity domain
CA733_RS32885	SM00382	ATPases associated with a variety of cellular activities
CA733_RS32905	SM00858	CA733_RS32905
CA733_RS32950	SM00028	Tetratricopeptide repeats
CA733_RS32960	SM00327	von Willebrand factor (vWF) type A domain
CA733_RS32965	SM00448	cheY-homologous receiver domain
CA733_RS32970	SM00448	cheY-homologous receiver domain
CA733_RS32975	SM00387	Histidine kinase-like ATPases
CA733_RS32975	SM00448	cheY-homologous receiver domain
CA733_RS32980	SM00387	Histidine kinase-like ATPases
CA733_RS32980	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS32980	SM00448	cheY-homologous receiver domain
CA733_RS33005	SM00873	B3/4 domain
CA733_RS33005	SM00874	tRNA synthetase B5 domain
CA733_RS33005	SM00896	Ferredoxin-fold anticodon binding domain
CA733_RS33050	SM00271	DnaJ molecular chaperone homology domain
CA733_RS33135	SM00421	helix_turn_helix, Lux Regulon
CA733_RS33140	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS33175	SM00838	Elongation factor G C-terminus
CA733_RS33175	SM00889	Elongation factor G, domain IV
CA733_RS33180	SM00028	Tetratricopeptide repeats
CA733_RS33290	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS33290	SM00240	Forkhead associated domain
CA733_RS33295	SM00331	Sigma factor PP2C-like phosphatases
CA733_RS33295	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CA733_RS33305	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS33305	SM00091	PAS domain
CA733_RS33305	SM00387	Histidine kinase-like ATPases
CA733_RS33305	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS33410	SM00984	UDP binding domain
CA733_RS33455	SM00938	Nitrogen regulatory protein P-II
CA733_RS33495	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS33495	SM01091	Transporter associated domain
CA733_RS33520	SM00890	Domain of unknown function
CA733_RS33545	SM00320	WD40 repeats
CA733_RS33545	SM00421	helix_turn_helix, Lux Regulon
CA733_RS33635	SM00287	Bacterial SH3 domain homologues
CA733_RS33635	SM00646	CA733_RS33635
CA733_RS33655	SM00382	ATPases associated with a variety of cellular activities
CA733_RS33660	SM00028	Tetratricopeptide repeats
CA733_RS33690	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS33690	SM00320	WD40 repeats
CA733_RS33705	SM00382	ATPases associated with a variety of cellular activities
CA733_RS33745	SM00382	ATPases associated with a variety of cellular activities
CA733_RS33750	SM00835	Cupin
CA733_RS33775	SM00487	DEAD-like helicases superfamily
CA733_RS33775	SM00490	helicase superfamily c-terminal domain
CA733_RS33780	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS33780	SM00091	PAS domain
CA733_RS33780	SM00387	Histidine kinase-like ATPases
CA733_RS33780	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS33780	SM00448	cheY-homologous receiver domain
CA733_RS33865	SM00897	FIST N domain
CA733_RS33865	SM01204	CA733_RS33865
CA733_RS33870	SM00387	Histidine kinase-like ATPases
CA733_RS33870	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS33880	SM00842	Cell division protein FtsA
CA733_RS33905	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS33905	SM00091	PAS domain
CA733_RS33905	SM00387	Histidine kinase-like ATPases
CA733_RS33905	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS33925	SM00320	WD40 repeats
CA733_RS33935	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS33935	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS33935	SM00387	Histidine kinase-like ATPases
CA733_RS33935	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS33965	SM00877	CA733_RS33965
CA733_RS33970	SM00448	cheY-homologous receiver domain
CA733_RS33985	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS33990	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS33990	SM00387	Histidine kinase-like ATPases
CA733_RS33990	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS33990	SM00448	cheY-homologous receiver domain
CA733_RS34000	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS34000	SM00331	Sigma factor PP2C-like phosphatases
CA733_RS34005	SM00479	CA733_RS34005
CA733_RS34030	SM00631	CA733_RS34030
CA733_RS34035	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
CA733_RS34075	SM00028	Tetratricopeptide repeats
CA733_RS34100	SM00487	DEAD-like helicases superfamily
CA733_RS34100	SM00490	helicase superfamily c-terminal domain
CA733_RS34150	SM00093	SERine  Proteinase INhibitors
CA733_RS34210	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS34225	SM00347	helix_turn_helix multiple antibiotic resistance protein
CA733_RS34280	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS34340	SM01228	CA733_RS34340
CA733_RS34350	SM00646	CA733_RS34350
CA733_RS34360	SM00052	Putative diguanylate phosphodiesterase
CA733_RS34360	SM00267	diguanylate cyclase
CA733_RS34360	SM00448	cheY-homologous receiver domain
CA733_RS34365	SM00387	Histidine kinase-like ATPases
CA733_RS34365	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS34365	SM00448	cheY-homologous receiver domain
CA733_RS34410	SM00387	Histidine kinase-like ATPases
CA733_RS34410	SM00448	cheY-homologous receiver domain
CA733_RS34420	SM00382	ATPases associated with a variety of cellular activities
CA733_RS34420	SM00393	Putative single-stranded nucleic acids-binding domain
CA733_RS34470	SM00240	Forkhead associated domain
CA733_RS34475	SM01118	CA733_RS34475
CA733_RS34480	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS34480	SM00320	WD40 repeats
CA733_RS34485	SM00320	WD40 repeats
CA733_RS34505	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS34745	SM00116	Domain in cystathionine beta-synthase and other proteins.
CA733_RS34745	SM01093	CA733_RS34745
CA733_RS34750	SM00248	ankyrin repeats
CA733_RS34780	SM00387	Histidine kinase-like ATPases
CA733_RS34805	SM00861	Transketolase, pyrimidine binding domain
CA733_RS34810	SM00912	haemagglutination activity domain
CA733_RS34815	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS34815	SM01324	CA733_RS34815
CA733_RS34835	SM00230	Calpain-like thiol protease family.
CA733_RS34835	SM00235	Zinc-dependent metalloprotease
CA733_RS34860	SM00912	haemagglutination activity domain
CA733_RS34865	SM00912	haemagglutination activity domain
CA733_RS34870	SM00912	haemagglutination activity domain
CA733_RS34885	SM00912	haemagglutination activity domain
CA733_RS34890	SM00912	haemagglutination activity domain
CA733_RS34900	SM00028	Tetratricopeptide repeats
CA733_RS34910	SM00387	Histidine kinase-like ATPases
CA733_RS34910	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS34910	SM00448	cheY-homologous receiver domain
CA733_RS34910	SM01080	CA733_RS34910
CA733_RS34915	SM00387	Histidine kinase-like ATPases
CA733_RS34915	SM00448	cheY-homologous receiver domain
CA733_RS34950	SM00271	DnaJ molecular chaperone homology domain
CA733_RS34960	SM00028	Tetratricopeptide repeats
CA733_RS34980	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS34980	SM00448	cheY-homologous receiver domain
CA733_RS35005	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CA733_RS35025	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CA733_RS35025	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CA733_RS35025	SM00493	CA733_RS35025
CA733_RS35045	SM00360	RNA recognition motif
CA733_RS35070	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS35070	SM00091	PAS domain
CA733_RS35070	SM00387	Histidine kinase-like ATPases
CA733_RS35070	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS35075	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS35075	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CA733_RS35075	SM00091	PAS domain
CA733_RS35075	SM00387	Histidine kinase-like ATPases
CA733_RS35085	SM00478	endonuclease III
CA733_RS35130	SM00320	WD40 repeats
CA733_RS35160	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CA733_RS35165	SM00073	Histidine Phosphotransfer domain
CA733_RS35165	SM00260	Two component signalling adaptor domain
CA733_RS35165	SM00448	cheY-homologous receiver domain
CA733_RS35170	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS35170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CA733_RS35180	SM00220	Serine/Threonine protein kinases, catalytic domain
CA733_RS35210	SM00845	GatB domain
CA733_RS35225	SM00028	Tetratricopeptide repeats
CA733_RS35240	SM01152	CA733_RS35240
CA733_RS35285	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS35285	SM00876	Biotin and Thiamin Synthesis associated domain
CA733_RS35350	SM01094	CpcD/allophycocyanin linker domain
CA733_RS35435	SM00506	Appr-1"-p processing enzyme
CA733_RS35445	SM00836	DALR anticodon binding domain
CA733_RS35445	SM01016	Arginyl tRNA synthetase N terminal dom
CA733_RS35530	SM00387	Histidine kinase-like ATPases
CA733_RS35530	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS35535	SM00421	helix_turn_helix, Lux Regulon
CA733_RS35535	SM00448	cheY-homologous receiver domain
CA733_RS35555	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS35565	SM00028	Tetratricopeptide repeats
CA733_RS35590	SM00421	helix_turn_helix, Lux Regulon
CA733_RS35595	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS35600	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CA733_RS35605	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS35605	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CA733_RS35605	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CA733_RS35610	SM00028	Tetratricopeptide repeats
CA733_RS35620	SM00912	haemagglutination activity domain
CA733_RS35630	SM00028	Tetratricopeptide repeats
CA733_RS35645	SM00382	ATPases associated with a variety of cellular activities
CA733_RS35755	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CA733_RS35755	SM00387	Histidine kinase-like ATPases
CA733_RS35755	SM00388	His Kinase A (phosphoacceptor) domain
CA733_RS35770	SM00823	Phosphopantetheine attachment site
CA733_RS35865	SM00318	Staphylococcal nuclease homologues
CA733_RS35890	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS35895	SM00470	ParB-like nuclease domain
CA733_RS35905	SM00360	RNA recognition motif
CA733_RS35915	SM00320	WD40 repeats
CA733_RS35935	SM00470	ParB-like nuclease domain
CA733_RS35945	SM00487	DEAD-like helicases superfamily
CA733_RS35945	SM00490	helicase superfamily c-terminal domain
CA733_RS35975	SM00567	E-Z type HEAT repeats
CA733_RS36205	SM00530	Helix-turn-helix XRE-family like proteins 
CA733_RS36450	SM00382	ATPases associated with a variety of cellular activities
CA733_RS36480	SM00729	Elongator protein 3, MiaB family, Radical SAM
CA733_RS36525	SM00028	Tetratricopeptide repeats
CA733_RS36680	SM00530	Helix-turn-helix XRE-family like proteins 
