locus-tag class description CFF04554_RS00005 IPR020591 Chromosomal replication control, initiator DnaA-like CFF04554_RS00005 IPR013317 Chromosomal replication initiator protein DnaA CFF04554_RS00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal CFF04554_RS00005 IPR024633 DnaA N-terminal domain CFF04554_RS00005 IPR038454 DnaA, N-terminal domain superfamily CFF04554_RS00005 IPR003593 AAA+ ATPase domain CFF04554_RS00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00005 IPR010921 Trp repressor/replication initiator CFF04554_RS00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CFF04554_RS00005 IPR001957 Chromosomal replication control, initiator DnaA CFF04554_RS00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CFF04554_RS00010 IPR022637 DNA polymerase III, beta sliding clamp, central CFF04554_RS00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CFF04554_RS00010 IPR001001 DNA polymerase III, beta sliding clamp CFF04554_RS00015 IPR034160 DNA gyrase subunit B, TOPRIM domain CFF04554_RS00015 IPR006171 TOPRIM domain CFF04554_RS00015 IPR018522 DNA topoisomerase, type IIA, conserved site CFF04554_RS00015 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CFF04554_RS00015 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CFF04554_RS00015 IPR001241 DNA topoisomerase, type IIA CFF04554_RS00015 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS00015 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS00015 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFF04554_RS00015 IPR003594 Histidine kinase/HSP90-like ATPase CFF04554_RS00015 IPR011557 DNA gyrase, subunit B CFF04554_RS00015 IPR002288 DNA gyrase B subunit, C-terminal CFF04554_RS00015 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CFF04554_RS00025 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CFF04554_RS00025 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 CFF04554_RS00040 IPR011491 Flagellar hook protein FlgE CFF04554_RS00040 IPR037058 Flagellar hook protein FlgE superfamily CFF04554_RS00040 IPR001444 Flagellar basal body rod protein, N-terminal CFF04554_RS00040 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CFF04554_RS00040 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS00040 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CFF04554_RS00040 IPR019776 Flagellar basal body rod protein, conserved site CFF04554_RS00045 IPR005648 Flagellar hook capping protein CFF04554_RS00055 IPR036259 MFS transporter superfamily CFF04554_RS00055 IPR020846 Major facilitator superfamily domain CFF04554_RS00055 IPR011701 Major facilitator superfamily CFF04554_RS00055 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CFF04554_RS00055 IPR004734 Multidrug resistance protein CFF04554_RS00060 IPR005225 Small GTP-binding protein domain CFF04554_RS00060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00060 IPR031157 Tr-type G domain, conserved site CFF04554_RS00060 IPR004161 Translation elongation factor EFTu-like, domain 2 CFF04554_RS00060 IPR000640 Elongation factor EFG, domain V-like CFF04554_RS00060 IPR035647 EF-G domain III/V-like CFF04554_RS00060 IPR035651 BipA, domain V CFF04554_RS00060 IPR000795 Transcription factor, GTP-binding domain CFF04554_RS00060 IPR009000 Translation protein, beta-barrel domain superfamily CFF04554_RS00060 IPR042116 GTP-binding protein TypA/BipA, C-terminal CFF04554_RS00060 IPR006298 GTP-binding protein TypA CFF04554_RS00075 IPR036397 Ribonuclease H superfamily CFF04554_RS00075 IPR012337 Ribonuclease H-like superfamily CFF04554_RS00075 IPR024567 Ribonuclease HII/HIII domain CFF04554_RS00075 IPR022898 Ribonuclease HII CFF04554_RS00075 IPR001352 Ribonuclease HII/HIII CFF04554_RS00080 IPR022493 Integral membrane YkoY CFF04554_RS00080 IPR005496 Integral membrane protein TerC CFF04554_RS00085 IPR008995 Molybdate/tungstate binding, C-terminal CFF04554_RS00085 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CFF04554_RS00085 IPR013611 Transport-associated OB, type 2 CFF04554_RS00085 IPR003439 ABC transporter-like CFF04554_RS00085 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CFF04554_RS00085 IPR017871 ABC transporter, conserved site CFF04554_RS00085 IPR003593 AAA+ ATPase domain CFF04554_RS00085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00095 IPR002524 Cation efflux protein CFF04554_RS00095 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CFF04554_RS00095 IPR027469 Cation efflux transmembrane domain superfamily CFF04554_RS00115 IPR013785 Aldolase-type TIM barrel CFF04554_RS00115 IPR001989 Radical-activating enzyme, conserved site CFF04554_RS00115 IPR012838 Pyruvate formate-lyase 1 activating enzyme CFF04554_RS00115 IPR034457 Organic radical-activating enzymes CFF04554_RS00115 IPR007197 Radical SAM CFF04554_RS00115 IPR034465 Pyruvate formate-lyase activase CFF04554_RS00125 IPR003539 Cytolethal distending toxin B CFF04554_RS00125 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CFF04554_RS00125 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS00140 IPR009078 Ferritin-like superfamily CFF04554_RS00140 IPR012348 Ribonucleotide reductase-like CFF04554_RS00140 IPR033909 Ribonucleotide reductase small subunit CFF04554_RS00140 IPR030475 Ribonucleotide reductase small subunit, acitve site CFF04554_RS00140 IPR000358 Ribonucleotide reductase small subunit family CFF04554_RS00145 IPR001110 Uncharacterised protein family UPF0012, conserved site CFF04554_RS00145 IPR036526 Carbon-nitrogen hydrolase superfamily CFF04554_RS00145 IPR003010 Carbon-nitrogen hydrolase CFF04554_RS00150 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CFF04554_RS00150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS00155 IPR019831 Manganese/iron superoxide dismutase, N-terminal CFF04554_RS00155 IPR019832 Manganese/iron superoxide dismutase, C-terminal CFF04554_RS00155 IPR019833 Manganese/iron superoxide dismutase, binding site CFF04554_RS00155 IPR001189 Manganese/iron superoxide dismutase CFF04554_RS00155 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CFF04554_RS00155 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CFF04554_RS00160 IPR036838 Ribosomal protein S10 domain superfamily CFF04554_RS00160 IPR027486 Ribosomal protein S10 domain CFF04554_RS00160 IPR018268 Ribosomal protein S10, conserved site CFF04554_RS00160 IPR001848 Ribosomal protein S10 CFF04554_RS00165 IPR000597 Ribosomal protein L3 CFF04554_RS00165 IPR019927 Ribosomal protein L3, bacterial/organelle-type CFF04554_RS00165 IPR009000 Translation protein, beta-barrel domain superfamily CFF04554_RS00170 IPR023574 Ribosomal protein L4 domain superfamily CFF04554_RS00170 IPR013005 50S ribosomal protein uL4 CFF04554_RS00170 IPR002136 Ribosomal protein L4/L1e CFF04554_RS00175 IPR012678 Ribosomal protein L23/L15e core domain superfamily CFF04554_RS00175 IPR013025 Ribosomal protein L25/L23 CFF04554_RS00175 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CFF04554_RS00180 IPR022666 Ribosomal Proteins L2, RNA binding domain CFF04554_RS00180 IPR022671 Ribosomal protein L2, conserved site CFF04554_RS00180 IPR022669 Ribosomal protein L2, C-terminal CFF04554_RS00180 IPR005880 Ribosomal protein L2, bacterial/organellar-type CFF04554_RS00180 IPR002171 Ribosomal protein L2 CFF04554_RS00180 IPR014726 Ribosomal protein L2, domain 3 CFF04554_RS00180 IPR008991 Translation protein SH3-like domain superfamily CFF04554_RS00180 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS00180 IPR014722 Ribosomal protein L2, domain 2 CFF04554_RS00185 IPR023575 Ribosomal protein S19, superfamily CFF04554_RS00185 IPR020934 Ribosomal protein S19 conserved site CFF04554_RS00185 IPR005732 Ribosomal protein S19, bacterial-type CFF04554_RS00185 IPR002222 Ribosomal protein S19/S15 CFF04554_RS00190 IPR018260 Ribosomal protein L22/L17, conserved site CFF04554_RS00190 IPR036394 Ribosomal protein L22/L17 superfamily CFF04554_RS00190 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CFF04554_RS00190 IPR001063 Ribosomal protein L22/L17 CFF04554_RS00195 IPR004087 K Homology domain CFF04554_RS00195 IPR018280 Ribosomal protein S3, conserved site CFF04554_RS00195 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CFF04554_RS00195 IPR001351 Ribosomal protein S3, C-terminal CFF04554_RS00195 IPR005704 Ribosomal protein S3, bacterial-type CFF04554_RS00195 IPR009019 K homology domain superfamily, prokaryotic type CFF04554_RS00195 IPR004044 K Homology domain, type 2 CFF04554_RS00195 IPR015946 K homology domain-like, alpha/beta CFF04554_RS00200 IPR016180 Ribosomal protein L10e/L16 CFF04554_RS00200 IPR036920 Ribosomal protein L10e/L16 superfamily CFF04554_RS00200 IPR020798 Ribosomal protein L16, conserved site CFF04554_RS00200 IPR000114 Ribosomal protein L16 CFF04554_RS00205 IPR018254 Ribosomal protein L29, conserved site CFF04554_RS00205 IPR036049 Ribosomal protein L29/L35 superfamily CFF04554_RS00205 IPR001854 Ribosomal protein L29/L35 CFF04554_RS00210 IPR000266 Ribosomal protein S17/S11 CFF04554_RS00210 IPR019979 Ribosomal protein S17, conserved site CFF04554_RS00210 IPR019984 30S ribosomal protein S17 CFF04554_RS00210 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS00215 IPR019972 Ribosomal protein L14P, conserved site CFF04554_RS00215 IPR005745 Ribosomal protein L14P, bacterial-type CFF04554_RS00215 IPR000218 Ribosomal protein L14P CFF04554_RS00215 IPR036853 Ribosomal protein L14 superfamily CFF04554_RS00220 IPR008991 Translation protein SH3-like domain superfamily CFF04554_RS00220 IPR003256 Ribosomal protein L24 CFF04554_RS00220 IPR005824 KOW CFF04554_RS00220 IPR041988 Ribosomal Protein L26/L24, KOW domain CFF04554_RS00220 IPR005825 Ribosomal protein L24/L26, conserved site CFF04554_RS00225 IPR031310 Ribosomal protein L5, N-terminal CFF04554_RS00225 IPR022803 Ribosomal protein L5 domain superfamily CFF04554_RS00225 IPR002132 Ribosomal protein L5 CFF04554_RS00225 IPR020930 Ribosomal protein L5, bacterial-type CFF04554_RS00225 IPR020929 Ribosomal protein L5, conserved site CFF04554_RS00225 IPR031309 Ribosomal protein L5, C-terminal CFF04554_RS00230 IPR001209 Ribosomal protein S14 CFF04554_RS00230 IPR018271 Ribosomal protein S14, conserved site CFF04554_RS00230 IPR023053 Ribosomal protein S14, type Z CFF04554_RS00235 IPR000630 Ribosomal protein S8 CFF04554_RS00235 IPR035987 Ribosomal protein S8 superfamily CFF04554_RS00240 IPR020040 Ribosomal protein L6, alpha-beta domain CFF04554_RS00240 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CFF04554_RS00240 IPR002358 Ribosomal protein L6, conserved site CFF04554_RS00240 IPR019906 Ribosomal protein L6, bacterial-type CFF04554_RS00240 IPR000702 Ribosomal protein L6 CFF04554_RS00245 IPR004389 Ribosomal protein L18, bacterial-type CFF04554_RS00245 IPR005484 Ribosomal protein L18 CFF04554_RS00250 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS00250 IPR000851 Ribosomal protein S5 CFF04554_RS00250 IPR005324 Ribosomal protein S5, C-terminal CFF04554_RS00250 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS00250 IPR005712 Ribosomal protein S5, bacterial-type CFF04554_RS00250 IPR018192 Ribosomal protein S5, N-terminal, conserved site CFF04554_RS00250 IPR013810 Ribosomal protein S5, N-terminal CFF04554_RS00255 IPR005749 Ribosomal protein L15, bacterial-type CFF04554_RS00255 IPR021131 Ribosomal protein L18e/L15P CFF04554_RS00255 IPR036227 Ribosomal L18e/L15P superfamily CFF04554_RS00255 IPR030878 Ribosomal protein L15 CFF04554_RS00260 IPR030659 SecY conserved site CFF04554_RS00260 IPR023201 SecY domain superfamily CFF04554_RS00260 IPR026593 Protein translocase subunit SecY CFF04554_RS00260 IPR002208 SecY/SEC61-alpha family CFF04554_RS00265 IPR001714 Peptidase M24, methionine aminopeptidase CFF04554_RS00265 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CFF04554_RS00265 IPR000994 Peptidase M24 CFF04554_RS00265 IPR036005 Creatinase/aminopeptidase-like CFF04554_RS00270 IPR004368 Translation initiation factor IF-1 CFF04554_RS00270 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS00270 IPR006196 RNA-binding domain, S1, IF1 type CFF04554_RS00275 IPR000473 Ribosomal protein L36 CFF04554_RS00275 IPR035977 Ribosomal protein L36 superfamily CFF04554_RS00280 IPR001892 Ribosomal protein S13 CFF04554_RS00280 IPR019980 Ribosomal protein S13, bacterial-type CFF04554_RS00280 IPR010979 Ribosomal protein S13-like, H2TH CFF04554_RS00280 IPR018269 Ribosomal protein S13, conserved site CFF04554_RS00280 IPR027437 30s ribosomal protein S13, C-terminal CFF04554_RS00285 IPR001971 Ribosomal protein S11 CFF04554_RS00285 IPR019981 Ribosomal protein S11, bacterial-type CFF04554_RS00285 IPR036967 Ribosomal protein S11 superfamily CFF04554_RS00285 IPR018102 Ribosomal S11, conserved site CFF04554_RS00290 IPR001912 Ribosomal protein S4/S9, N-terminal CFF04554_RS00290 IPR005709 Ribosomal protein S4, bacterial-type CFF04554_RS00290 IPR018079 Ribosomal protein S4, conserved site CFF04554_RS00290 IPR022801 Ribosomal protein S4/S9 CFF04554_RS00290 IPR036986 RNA-binding S4 domain superfamily CFF04554_RS00290 IPR002942 RNA-binding S4 domain CFF04554_RS00295 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CFF04554_RS00295 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CFF04554_RS00295 IPR011262 DNA-directed RNA polymerase, insert domain CFF04554_RS00295 IPR011773 DNA-directed RNA polymerase, alpha subunit CFF04554_RS00295 IPR036603 RNA polymerase, RBP11-like subunit CFF04554_RS00295 IPR011260 RNA polymerase, alpha subunit, C-terminal CFF04554_RS00300 IPR000456 Ribosomal protein L17 CFF04554_RS00300 IPR036373 Ribosomal protein L17 superfamily CFF04554_RS00315 IPR004101 Mur ligase, C-terminal CFF04554_RS00315 IPR036565 Mur-like, catalytic domain superfamily CFF04554_RS00315 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CFF04554_RS00315 IPR018109 Folylpolyglutamate synthetase, conserved site CFF04554_RS00315 IPR036615 Mur ligase, C-terminal domain superfamily CFF04554_RS00315 IPR013221 Mur ligase, central CFF04554_RS00320 IPR009010 Aspartate decarboxylase-like domain superfamily CFF04554_RS00320 IPR003190 Aspartate decarboxylase CFF04554_RS00325 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS00325 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CFF04554_RS00325 IPR003660 HAMP domain CFF04554_RS00325 IPR004090 Chemotaxis methyl-accepting receptor CFF04554_RS00325 IPR000727 Target SNARE coiled-coil homology domain CFF04554_RS00330 IPR004401 Nucleoid-associated protein YbaB/EbfC family CFF04554_RS00330 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CFF04554_RS00340 IPR033749 Polyprenyl synthetase, conserved site CFF04554_RS00340 IPR000092 Polyprenyl synthetase CFF04554_RS00340 IPR008949 Isoprenoid synthase domain superfamily CFF04554_RS00345 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS00345 IPR005474 Transketolase, N-terminal CFF04554_RS00345 IPR033247 Transketolase family CFF04554_RS00345 IPR033248 Transketolase, C-terminal domain CFF04554_RS00345 IPR005478 Transketolase, bacterial-like CFF04554_RS00345 IPR005475 Transketolase-like, pyrimidine-binding domain CFF04554_RS00345 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CFF04554_RS00350 IPR015590 Aldehyde dehydrogenase domain CFF04554_RS00350 IPR016162 Aldehyde dehydrogenase, N-terminal CFF04554_RS00350 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFF04554_RS00350 IPR016160 Aldehyde dehydrogenase, cysteine active site CFF04554_RS00350 IPR016163 Aldehyde dehydrogenase, C-terminal CFF04554_RS00350 IPR016161 Aldehyde/histidinol dehydrogenase CFF04554_RS00360 IPR025299 CstA, C-terminal domain CFF04554_RS00360 IPR003706 CstA, N-terminal domain CFF04554_RS00375 IPR008867 Thiazole synthase CFF04554_RS00375 IPR013785 Aldolase-type TIM barrel CFF04554_RS00375 IPR033983 Thiazole synthase ThiG CFF04554_RS00380 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CFF04554_RS00380 IPR020612 Methylthiotransferase, conserved site CFF04554_RS00380 IPR005839 Methylthiotransferase CFF04554_RS00380 IPR013848 Methylthiotransferase, N-terminal CFF04554_RS00380 IPR002792 TRAM domain CFF04554_RS00380 IPR041582 RimO, TRAM domain CFF04554_RS00380 IPR038135 Methylthiotransferase, N-terminal domain superfamily CFF04554_RS00380 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS00380 IPR007197 Radical SAM CFF04554_RS00380 IPR006638 Elp3/MiaB/NifB CFF04554_RS00385 IPR035647 EF-G domain III/V-like CFF04554_RS00385 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CFF04554_RS00385 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CFF04554_RS00385 IPR001498 Impact, N-terminal CFF04554_RS00385 IPR015796 Impact family, bacterial/archaeal CFF04554_RS00385 IPR036956 Impact, N-terminal domain superfamily CFF04554_RS00385 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS00385 IPR023582 Impact family CFF04554_RS00390 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CFF04554_RS00390 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS00390 IPR005835 Nucleotidyl transferase domain CFF04554_RS00395 IPR035476 Phosphoglucose isomerase, SIS domain 1 CFF04554_RS00395 IPR035482 Phosphoglucose isomerase, SIS domain 2 CFF04554_RS00395 IPR018189 Phosphoglucose isomerase, conserved site CFF04554_RS00395 IPR001672 Phosphoglucose isomerase (PGI) CFF04554_RS00400 IPR008331 Ferritin/DPS protein domain CFF04554_RS00400 IPR009078 Ferritin-like superfamily CFF04554_RS00400 IPR012347 Ferritin-like CFF04554_RS00400 IPR002177 DNA-binding protein Dps CFF04554_RS00405 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CFF04554_RS00405 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CFF04554_RS00405 IPR023480 Uncharacterised protein family UPF0312/YceI CFF04554_RS00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00415 IPR004472 Dethiobiotin synthase BioD CFF04554_RS00420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS00420 IPR041698 Methyltransferase domain 25 CFF04554_RS00420 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CFF04554_RS00425 IPR013216 Methyltransferase type 11 CFF04554_RS00425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS00425 IPR007398 Protein of unknown function DUF452 CFF04554_RS00425 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC CFF04554_RS00425 IPR029058 Alpha/Beta hydrolase fold CFF04554_RS00430 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CFF04554_RS00430 IPR004839 Aminotransferase, class I/classII CFF04554_RS00430 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type CFF04554_RS00430 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS00430 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS00430 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS00440 IPR036921 PurM-like, N-terminal domain superfamily CFF04554_RS00440 IPR036676 PurM-like, C-terminal domain superfamily CFF04554_RS00440 IPR010918 PurM-like, C-terminal domain CFF04554_RS00440 IPR016188 PurM-like, N-terminal domain CFF04554_RS00440 IPR006283 Thiamine-monophosphate kinase CFF04554_RS00445 IPR011760 Pseudouridine synthase, TruD, insertion domain CFF04554_RS00445 IPR042214 Pseudouridine synthase, TruD, catalytic domain CFF04554_RS00445 IPR001656 Pseudouridine synthase, TruD CFF04554_RS00445 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFF04554_RS00445 IPR020119 Pseudouridine synthase TruD, conserved site CFF04554_RS00455 IPR036584 Flagellar protein FliS superfamily CFF04554_RS00455 IPR003713 Flagellar protein FliS CFF04554_RS00460 IPR003481 Flagellar hook-associated protein 2, N-terminal CFF04554_RS00460 IPR010809 Flagellar hook-associated protein 2, C-terminal CFF04554_RS00460 IPR040026 Flagellar hook-associated protein 2 CFF04554_RS00460 IPR010810 Flagellin hook, IN motif CFF04554_RS00480 IPR001782 Flagellar P-ring protein CFF04554_RS00485 IPR016511 Uncharacterised conserved protein UCP007248 CFF04554_RS00500 IPR002371 Flagellar hook-associated protein 1 CFF04554_RS00500 IPR001444 Flagellar basal body rod protein, N-terminal CFF04554_RS00500 IPR019776 Flagellar basal body rod protein, conserved site CFF04554_RS00500 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS00510 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CFF04554_RS00510 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CFF04554_RS00510 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CFF04554_RS00510 IPR005843 Alpha-D-phosphohexomutase, C-terminal CFF04554_RS00510 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CFF04554_RS00510 IPR016066 Alpha-D-phosphohexomutase, conserved site CFF04554_RS00510 IPR005841 Alpha-D-phosphohexomutase superfamily CFF04554_RS00510 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CFF04554_RS00515 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase CFF04554_RS00515 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal CFF04554_RS00515 IPR005835 Nucleotidyl transferase domain CFF04554_RS00515 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS00515 IPR014710 RmlC-like jelly roll fold CFF04554_RS00515 IPR011051 RmlC-like cupin domain superfamily CFF04554_RS00520 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS00520 IPR018317 Queuosine biosynthesis protein QueC CFF04554_RS00525 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS00525 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CFF04554_RS00525 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CFF04554_RS00525 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CFF04554_RS00525 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CFF04554_RS00525 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFF04554_RS00525 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CFF04554_RS00555 IPR008254 Flavodoxin/nitric oxide synthase CFF04554_RS00555 IPR029039 Flavoprotein-like superfamily CFF04554_RS00555 IPR010086 Flavodoxin, long chain CFF04554_RS00555 IPR001226 Flavodoxin, conserved site CFF04554_RS00560 IPR003815 S-ribosylhomocysteinase (LuxS) CFF04554_RS00560 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily CFF04554_RS00560 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CFF04554_RS00565 IPR005122 Uracil-DNA glycosylase-like CFF04554_RS00565 IPR002043 Uracil-DNA glycosylase family 1 CFF04554_RS00565 IPR036895 Uracil-DNA glycosylase-like domain superfamily CFF04554_RS00565 IPR018085 Uracil-DNA glycosylase, active site CFF04554_RS00570 IPR005813 Ribosomal protein L20 CFF04554_RS00570 IPR035566 Ribosomal protein L20, C-terminal CFF04554_RS00575 IPR018265 Ribosomal protein L35, conserved site CFF04554_RS00575 IPR001706 Ribosomal protein L35, non-mitochondrial CFF04554_RS00575 IPR021137 Ribosomal protein L35 CFF04554_RS00575 IPR037229 Ribosomal protein L35 superfamily CFF04554_RS00580 IPR026045 Ferric binding protein CFF04554_RS00580 IPR006059 Bacterial extracellular solute-binding protein CFF04554_RS00590 IPR003423 Outer membrane efflux protein CFF04554_RS00590 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFF04554_RS00595 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CFF04554_RS00595 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CFF04554_RS00595 IPR001036 Acriflavin resistance protein CFF04554_RS00610 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG CFF04554_RS00610 IPR032879 FixG, C-terminal immunoglobulin-like domain CFF04554_RS00610 IPR013783 Immunoglobulin-like fold CFF04554_RS00610 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS00610 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS00615 IPR038380 Ribosomal protein S21 superfamily CFF04554_RS00615 IPR018278 Ribosomal protein S21, conserved site CFF04554_RS00615 IPR001911 Ribosomal protein S21 CFF04554_RS00630 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CFF04554_RS00630 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CFF04554_RS00635 IPR010226 NADH-quinone oxidoreductase, chain I CFF04554_RS00635 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS00635 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS00640 IPR001135 NADH-quinone oxidoreductase, subunit D CFF04554_RS00640 IPR001501 Nickel-dependent hydrogenase, large subunit CFF04554_RS00640 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CFF04554_RS00640 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CFF04554_RS00640 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CFF04554_RS00640 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CFF04554_RS00640 IPR029014 [NiFe]-hydrogenase, large subunit CFF04554_RS00645 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CFF04554_RS00645 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CFF04554_RS00650 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CFF04554_RS00650 IPR038730 Hydrogenase-4 component E-like CFF04554_RS00655 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CFF04554_RS00655 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CFF04554_RS00660 IPR003918 NADH:ubiquinone oxidoreductase CFF04554_RS00660 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CFF04554_RS00665 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS00665 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS00700 IPR039420 Transcriptional regulatory protein WalR-like CFF04554_RS00700 IPR011006 CheY-like superfamily CFF04554_RS00700 IPR001867 OmpR/PhoB-type DNA-binding domain CFF04554_RS00700 IPR016032 Signal transduction response regulator, C-terminal effector CFF04554_RS00700 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS00700 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS00710 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CFF04554_RS00710 IPR023045 Molybdenum cofactor biosynthesis C CFF04554_RS00710 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CFF04554_RS00715 IPR027471 YbeD-like domain superfamily CFF04554_RS00715 IPR007454 Uncharacterised protein family UPF0250 CFF04554_RS00730 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CFF04554_RS00735 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFF04554_RS00735 IPR009248 SbmA/BacA-like CFF04554_RS00740 IPR001915 Peptidase M48 CFF04554_RS00745 IPR003804 L-lactate permease CFF04554_RS00750 IPR036318 FAD-binding, type PCMH-like superfamily CFF04554_RS00750 IPR016169 FAD-binding, type PCMH, subdomain 2 CFF04554_RS00750 IPR005170 Transporter-associated domain CFF04554_RS00750 IPR000644 CBS domain CFF04554_RS00750 IPR002550 CNNM, transmembrane domain CFF04554_RS00785 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CFF04554_RS00785 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily CFF04554_RS00785 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CFF04554_RS00790 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CFF04554_RS00790 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CFF04554_RS00795 IPR026662 NADH-quinone oxidoreductase subunit CD CFF04554_RS00795 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily CFF04554_RS00795 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily CFF04554_RS00795 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CFF04554_RS00795 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CFF04554_RS00795 IPR029014 [NiFe]-hydrogenase, large subunit CFF04554_RS00795 IPR001135 NADH-quinone oxidoreductase, subunit D CFF04554_RS00800 IPR002023 NADH-quinone oxidoreductase subunit E-like CFF04554_RS00800 IPR042128 NuoE domain CFF04554_RS00800 IPR041921 NADH-quinone oxidoreductase subunit E, N-terminal CFF04554_RS00800 IPR036249 Thioredoxin-like superfamily CFF04554_RS00805 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain CFF04554_RS00805 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily CFF04554_RS00805 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain CFF04554_RS00805 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily CFF04554_RS00805 IPR019554 Soluble ligand binding domain CFF04554_RS00805 IPR011537 NADH ubiquinone oxidoreductase, F subunit CFF04554_RS00805 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CFF04554_RS00810 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CFF04554_RS00810 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CFF04554_RS00810 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CFF04554_RS00810 IPR006656 Molybdopterin oxidoreductase CFF04554_RS00810 IPR036010 2Fe-2S ferredoxin-like superfamily CFF04554_RS00810 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFF04554_RS00810 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal CFF04554_RS00810 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CFF04554_RS00815 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CFF04554_RS00815 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CFF04554_RS00820 IPR010226 NADH-quinone oxidoreductase, chain I CFF04554_RS00820 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS00820 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS00825 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CFF04554_RS00825 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ CFF04554_RS00830 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CFF04554_RS00830 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CFF04554_RS00835 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CFF04554_RS00835 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CFF04554_RS00835 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CFF04554_RS00835 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CFF04554_RS00840 IPR010227 NADH-quinone oxidoreductase, chain M/4 CFF04554_RS00840 IPR003918 NADH:ubiquinone oxidoreductase CFF04554_RS00840 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CFF04554_RS00845 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CFF04554_RS00845 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CFF04554_RS00855 IPR002751 Metal transport protein CbiM/NikMN CFF04554_RS00870 IPR003593 AAA+ ATPase domain CFF04554_RS00870 IPR017871 ABC transporter, conserved site CFF04554_RS00870 IPR003439 ABC transporter-like CFF04554_RS00870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00875 IPR034149 DNA topoisomerase 1, TOPRIM domain CFF04554_RS00875 IPR006171 TOPRIM domain CFF04554_RS00875 IPR005733 DNA topoisomerase I, bacterial-type CFF04554_RS00875 IPR013498 DNA topoisomerase, type IA, zn finger CFF04554_RS00875 IPR000380 DNA topoisomerase, type IA CFF04554_RS00875 IPR003601 DNA topoisomerase, type IA, domain 2 CFF04554_RS00875 IPR023406 DNA topoisomerase, type IA, active site CFF04554_RS00875 IPR013497 DNA topoisomerase, type IA, central CFF04554_RS00875 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CFF04554_RS00875 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CFF04554_RS00875 IPR023405 DNA topoisomerase, type IA, core domain CFF04554_RS00875 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CFF04554_RS00875 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CFF04554_RS00875 IPR028612 DNA topoisomerase I, type IA CFF04554_RS00880 IPR013785 Aldolase-type TIM barrel CFF04554_RS00880 IPR010722 Biotin and thiamin synthesis-associated domain CFF04554_RS00880 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CFF04554_RS00880 IPR024177 Biotin synthase CFF04554_RS00880 IPR006638 Elp3/MiaB/NifB CFF04554_RS00880 IPR007197 Radical SAM CFF04554_RS00885 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS00885 IPR003148 Regulator of K+ conductance, N-terminal CFF04554_RS00885 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CFF04554_RS00885 IPR006037 Regulator of K+ conductance, C-terminal CFF04554_RS00885 IPR038770 Sodium/solute symporter superfamily CFF04554_RS00885 IPR006153 Cation/H+ exchanger CFF04554_RS00890 IPR024176 Citrate synthase, bacterial-type CFF04554_RS00890 IPR019810 Citrate synthase active site CFF04554_RS00890 IPR016143 Citrate synthase-like, small alpha subdomain CFF04554_RS00890 IPR016142 Citrate synthase-like, large alpha subdomain CFF04554_RS00890 IPR036969 Citrate synthase superfamily CFF04554_RS00890 IPR002020 Citrate synthase CFF04554_RS00895 IPR000760 Inositol monophosphatase-like CFF04554_RS00895 IPR020583 Inositol monophosphatase, metal-binding site CFF04554_RS00895 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ CFF04554_RS00895 IPR020550 Inositol monophosphatase, conserved site CFF04554_RS00900 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS CFF04554_RS00900 IPR024370 PBP domain CFF04554_RS00905 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFF04554_RS00905 IPR035906 MetI-like superfamily CFF04554_RS00905 IPR011864 Phosphate ABC transporter, permease protein PstC CFF04554_RS00910 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFF04554_RS00910 IPR035906 MetI-like superfamily CFF04554_RS00910 IPR005672 Phosphate transport system permease protein PstA CFF04554_RS00915 IPR005670 Phosphate transport system permease protein 1 CFF04554_RS00915 IPR003593 AAA+ ATPase domain CFF04554_RS00915 IPR017871 ABC transporter, conserved site CFF04554_RS00915 IPR015850 ABC transporter, phosphate import, PstB CFF04554_RS00915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS00915 IPR003439 ABC transporter-like CFF04554_RS00920 IPR036259 MFS transporter superfamily CFF04554_RS00920 IPR020846 Major facilitator superfamily domain CFF04554_RS00920 IPR011701 Major facilitator superfamily CFF04554_RS00925 IPR000014 PAS domain CFF04554_RS00925 IPR035965 PAS domain superfamily CFF04554_RS00925 IPR000700 PAS-associated, C-terminal CFF04554_RS00925 IPR001610 PAC motif CFF04554_RS00925 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS00925 IPR004090 Chemotaxis methyl-accepting receptor CFF04554_RS00925 IPR013655 PAS fold-3 CFF04554_RS00945 IPR036425 MoaB/Mog-like domain superfamily CFF04554_RS00945 IPR001453 MoaB/Mog domain CFF04554_RS00945 IPR036688 MoeA, C-terminal, domain IV superfamily CFF04554_RS00945 IPR038987 Molybdopterin biosynthesis protein MoeA-like CFF04554_RS00945 IPR036135 MoeA, N-terminal and linker domain superfamily CFF04554_RS00945 IPR005111 MoeA, C-terminal, domain IV CFF04554_RS00945 IPR005110 MoeA, N-terminal and linker domain CFF04554_RS00960 IPR003448 Molybdopterin biosynthesis MoaE CFF04554_RS00960 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CFF04554_RS00975 IPR011823 3-isopropylmalate dehydratase, large subunit, bacteria CFF04554_RS00975 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CFF04554_RS00975 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CFF04554_RS00975 IPR018136 Aconitase family, 4Fe-4S cluster binding site CFF04554_RS00975 IPR036008 Aconitase, iron-sulfur domain CFF04554_RS00975 IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic CFF04554_RS00975 IPR006251 Homoaconitase/3-isopropylmalate dehydratase, large subunit CFF04554_RS00975 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CFF04554_RS00980 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS00980 IPR025877 MobA-like NTP transferase CFF04554_RS00980 IPR013482 Molybdenum cofactor guanylyltransferase CFF04554_RS00985 IPR036541 Phospholipase A1 superfamily CFF04554_RS00985 IPR003187 Phospholipase A1 CFF04554_RS01000 IPR000941 Enolase CFF04554_RS01000 IPR020809 Enolase, conserved site CFF04554_RS01000 IPR020811 Enolase, N-terminal CFF04554_RS01000 IPR036849 Enolase-like, C-terminal domain superfamily CFF04554_RS01000 IPR029017 Enolase-like, N-terminal CFF04554_RS01000 IPR020810 Enolase, C-terminal TIM barrel domain CFF04554_RS01005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01005 IPR013765 DNA recombination and repair protein RecA CFF04554_RS01005 IPR003593 AAA+ ATPase domain CFF04554_RS01005 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CFF04554_RS01005 IPR020584 DNA recombination/repair protein RecA, conserved site CFF04554_RS01005 IPR023400 DNA recombination and repair protein RecA, C-terminal CFF04554_RS01005 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CFF04554_RS01010 IPR003773 Menaquinone biosynthesis enzyme CFF04554_RS01010 IPR030869 1,4-dihydroxy-6-naphtoate synthase CFF04554_RS01020 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CFF04554_RS01020 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CFF04554_RS01020 IPR016169 FAD-binding, type PCMH, subdomain 2 CFF04554_RS01020 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CFF04554_RS01020 IPR036318 FAD-binding, type PCMH-like superfamily CFF04554_RS01040 IPR000374 Phosphatidate cytidylyltransferase CFF04554_RS01045 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CFF04554_RS01045 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CFF04554_RS01045 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS01045 IPR036169 DXP reductoisomerase, C-terminal domain superfamily CFF04554_RS01045 IPR026877 DXP reductoisomerase C-terminal domain CFF04554_RS01045 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CFF04554_RS01050 IPR025777 GMP synthetase ATP pyrophosphatase domain CFF04554_RS01050 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS01050 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS01050 IPR001674 GMP synthase, C-terminal CFF04554_RS01050 IPR011257 DNA glycosylase CFF04554_RS01050 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS01050 IPR000182 GNAT domain CFF04554_RS01050 IPR005019 Methyladenine glycosylase CFF04554_RS01050 IPR017926 Glutamine amidotransferase CFF04554_RS01055 IPR006043 Xanthine/uracil/vitamin C permease CFF04554_RS01055 IPR006042 Xanthine/uracil permease CFF04554_RS01055 IPR029935 Uracil permease CFF04554_RS01070 IPR017860 Peptidase M22, conserved site CFF04554_RS01070 IPR017861 Kae1/TsaD family CFF04554_RS01070 IPR000905 Gcp-like domain CFF04554_RS01070 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CFF04554_RS01080 IPR039657 Dimethylallyltransferase CFF04554_RS01080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01080 IPR018022 IPP transferase CFF04554_RS01100 IPR013785 Aldolase-type TIM barrel CFF04554_RS01100 IPR006638 Elp3/MiaB/NifB CFF04554_RS01100 IPR013483 Molybdenum cofactor biosynthesis protein A CFF04554_RS01100 IPR007197 Radical SAM CFF04554_RS01100 IPR010505 Molybdenum cofactor synthesis C-terminal CFF04554_RS01100 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CFF04554_RS01105 IPR013785 Aldolase-type TIM barrel CFF04554_RS01105 IPR024924 7-carboxy-7-deazaguanine synthase-like CFF04554_RS01110 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CFF04554_RS01110 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CFF04554_RS01140 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CFF04554_RS01140 IPR001098 DNA-directed DNA polymerase, family A, palm domain CFF04554_RS01140 IPR002421 5'-3' exonuclease, N-terminal CFF04554_RS01140 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CFF04554_RS01140 IPR002562 3'-5' exonuclease domain CFF04554_RS01140 IPR036397 Ribonuclease H superfamily CFF04554_RS01140 IPR020045 DNA polymerase I-like, H3TH domain CFF04554_RS01140 IPR012337 Ribonuclease H-like superfamily CFF04554_RS01140 IPR019760 DNA-directed DNA polymerase, family A, conserved site CFF04554_RS01140 IPR029060 PIN-like domain superfamily CFF04554_RS01140 IPR018320 DNA polymerase 1 CFF04554_RS01140 IPR002298 DNA polymerase A CFF04554_RS01140 IPR008918 Helix-hairpin-helix motif, class 2 CFF04554_RS01145 IPR000540 Flagellar motor protein MotA, conserved site CFF04554_RS01145 IPR002898 MotA/TolQ/ExbB proton channel CFF04554_RS01150 IPR006665 OmpA-like domain CFF04554_RS01150 IPR036737 OmpA-like domain superfamily CFF04554_RS01150 IPR025713 Motility protein B, N-terminal domain CFF04554_RS01155 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS01155 IPR000813 7Fe ferredoxin CFF04554_RS01155 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS01160 IPR023005 Nucleoside diphosphate kinase, active site CFF04554_RS01160 IPR001564 Nucleoside diphosphate kinase CFF04554_RS01160 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CFF04554_RS01160 IPR034907 Nucleoside diphosphate kinase-like domain CFF04554_RS01170 IPR002677 Ribosomal protein L32p CFF04554_RS01170 IPR011332 Zinc-binding ribosomal protein CFF04554_RS01175 IPR003664 Fatty acid synthesis PlsX protein CFF04554_RS01175 IPR012281 Phospholipid biosynthesis protein, PlsX-like CFF04554_RS01180 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CFF04554_RS01180 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CFF04554_RS01180 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CFF04554_RS01180 IPR016039 Thiolase-like CFF04554_RS01195 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CFF04554_RS01205 IPR011006 CheY-like superfamily CFF04554_RS01205 IPR039420 Transcriptional regulatory protein WalR-like CFF04554_RS01205 IPR001867 OmpR/PhoB-type DNA-binding domain CFF04554_RS01205 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS01205 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CFF04554_RS01205 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS01210 IPR003594 Histidine kinase/HSP90-like ATPase CFF04554_RS01210 IPR003660 HAMP domain CFF04554_RS01210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFF04554_RS01210 IPR005467 Histidine kinase domain CFF04554_RS01210 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFF04554_RS01210 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFF04554_RS01210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFF04554_RS01215 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS01215 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS01230 IPR001269 tRNA-dihydrouridine synthase CFF04554_RS01230 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CFF04554_RS01230 IPR035587 DUS-like, FMN-binding domain CFF04554_RS01230 IPR013785 Aldolase-type TIM barrel CFF04554_RS01230 IPR018517 tRNA-dihydrouridine synthase, conserved site CFF04554_RS01245 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFF04554_RS01245 IPR003742 RNA methyltransferase RlmH CFF04554_RS01245 IPR029028 Alpha/beta knot methyltransferases CFF04554_RS01250 IPR029045 ClpP/crotonase-like domain superfamily CFF04554_RS01250 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CFF04554_RS01250 IPR041010 Acetyl-coA carboxylase zinc finger domain CFF04554_RS01250 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CFF04554_RS01250 IPR034733 Acetyl-CoA carboxylase CFF04554_RS01255 IPR036249 Thioredoxin-like superfamily CFF04554_RS01255 IPR019479 Peroxiredoxin, C-terminal CFF04554_RS01255 IPR013766 Thioredoxin domain CFF04554_RS01255 IPR024706 Peroxiredoxin, AhpC-type CFF04554_RS01255 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CFF04554_RS01265 IPR000192 Aminotransferase class V domain CFF04554_RS01265 IPR022278 Phosphoserine aminotransferase CFF04554_RS01265 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS01265 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS01265 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS01270 IPR003753 Exonuclease VII, large subunit CFF04554_RS01270 IPR020579 Exonuclease VII, large subunit, C-terminal CFF04554_RS01270 IPR025824 OB-fold nucleic acid binding domain CFF04554_RS01275 IPR004033 UbiE/COQ5 methyltransferase CFF04554_RS01275 IPR023576 UbiE/COQ5 methyltransferase, conserved site CFF04554_RS01275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS01290 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFF04554_RS01290 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG CFF04554_RS01295 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01295 IPR017871 ABC transporter, conserved site CFF04554_RS01295 IPR003593 AAA+ ATPase domain CFF04554_RS01295 IPR003439 ABC transporter-like CFF04554_RS01300 IPR000412 ABC-2 transporter CFF04554_RS01305 IPR000412 ABC-2 transporter CFF04554_RS01315 IPR033248 Transketolase, C-terminal domain CFF04554_RS01315 IPR005474 Transketolase, N-terminal CFF04554_RS01315 IPR020826 Transketolase binding site CFF04554_RS01315 IPR005475 Transketolase-like, pyrimidine-binding domain CFF04554_RS01315 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CFF04554_RS01315 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS01315 IPR005477 Deoxyxylulose-5-phosphate synthase CFF04554_RS01325 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CFF04554_RS01325 IPR000090 Flagellar motor switch protein FliG CFF04554_RS01325 IPR032779 Flagellar motor switch protein FliG, middle domain CFF04554_RS01325 IPR011002 Flagellar motor switch protein FliG, alpha-helical CFF04554_RS01325 IPR023087 Flagellar motor switch protein FliG, C-terminal CFF04554_RS01330 IPR013556 Flagellar M-ring C-terminal CFF04554_RS01330 IPR000067 Flagellar M-ring protein FliF CFF04554_RS01330 IPR006182 Secretory protein YscJ/FliF CFF04554_RS01335 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CFF04554_RS01335 IPR004839 Aminotransferase, class I/classII CFF04554_RS01335 IPR005861 Histidinol-phosphate aminotransferase family CFF04554_RS01335 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS01335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS01335 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS01340 IPR036263 Chorismate mutase type II superfamily CFF04554_RS01340 IPR036979 Chorismate mutase domain superfamily CFF04554_RS01340 IPR002701 Chorismate mutase II, prokaryotic-type CFF04554_RS01340 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain CFF04554_RS01340 IPR001086 Prephenate dehydratase CFF04554_RS01340 IPR018528 Prephenate dehydratase, conserved site CFF04554_RS01340 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CFF04554_RS01340 IPR002912 ACT domain CFF04554_RS01350 IPR029066 PLP-binding barrel CFF04554_RS01350 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CFF04554_RS01350 IPR002986 Diaminopimelate decarboxylase, LysA CFF04554_RS01350 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CFF04554_RS01350 IPR000183 Ornithine/DAP/Arg decarboxylase CFF04554_RS01350 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CFF04554_RS01350 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CFF04554_RS01365 IPR020922 dITP/XTP pyrophosphatase CFF04554_RS01365 IPR002637 Ham1-like protein CFF04554_RS01365 IPR029001 Inosine triphosphate pyrophosphatase-like CFF04554_RS01380 IPR011251 Luciferase-like domain CFF04554_RS01380 IPR036661 Luciferase-like domain superfamily CFF04554_RS01380 IPR019949 Luciferase family oxidoreductase, group 1 CFF04554_RS01390 IPR000522 ABC transporter, permease protein, BtuC-like CFF04554_RS01390 IPR037294 ABC transporter, BtuC-like CFF04554_RS01395 IPR003593 AAA+ ATPase domain CFF04554_RS01395 IPR017871 ABC transporter, conserved site CFF04554_RS01395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01395 IPR003439 ABC transporter-like CFF04554_RS01405 IPR002898 MotA/TolQ/ExbB proton channel CFF04554_RS01405 IPR014172 TonB-system energizer ExbB type-2 CFF04554_RS01420 IPR005097 Saccharopine dehydrogenase, NADP binding domain CFF04554_RS01420 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS01420 IPR032095 Saccharopine dehydrogenase, C-terminal CFF04554_RS01430 IPR027491 Ribosomal protein L31 type A CFF04554_RS01430 IPR042105 Ribosomal protein L31 superfamily CFF04554_RS01430 IPR034704 L28p-like CFF04554_RS01430 IPR002150 Ribosomal protein L31 CFF04554_RS01435 IPR014776 Tetrapyrrole methylase, subdomain 2 CFF04554_RS01435 IPR014777 Tetrapyrrole methylase, subdomain 1 CFF04554_RS01435 IPR035996 Tetrapyrrole methylase superfamily CFF04554_RS01435 IPR000878 Tetrapyrrole methylase CFF04554_RS01435 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CFF04554_RS01435 IPR008189 rRNA small subunit methyltransferase I CFF04554_RS01440 IPR001537 tRNA/rRNA methyltransferase, SpoU type CFF04554_RS01440 IPR029028 Alpha/beta knot methyltransferases CFF04554_RS01440 IPR029064 50S ribosomal protein L30e-like CFF04554_RS01440 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFF04554_RS01440 IPR004441 RNA methyltransferase TrmH family CFF04554_RS01440 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CFF04554_RS01455 IPR004839 Aminotransferase, class I/classII CFF04554_RS01455 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS01455 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS01455 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS01460 IPR001342 Homoserine dehydrogenase, catalytic CFF04554_RS01460 IPR002912 ACT domain CFF04554_RS01460 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CFF04554_RS01460 IPR016204 Homoserine dehydrogenase CFF04554_RS01460 IPR019811 Homoserine dehydrogenase, conserved site CFF04554_RS01460 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS01465 IPR003509 Uncharacterised protein family UPF0102 CFF04554_RS01465 IPR011856 tRNA endonuclease-like domain superfamily CFF04554_RS01465 IPR011335 Restriction endonuclease type II-like CFF04554_RS01470 IPR013766 Thioredoxin domain CFF04554_RS01470 IPR017937 Thioredoxin, conserved site CFF04554_RS01470 IPR005746 Thioredoxin CFF04554_RS01470 IPR036249 Thioredoxin-like superfamily CFF04554_RS01475 IPR036188 FAD/NAD(P)-binding domain superfamily CFF04554_RS01475 IPR023753 FAD/NAD(P)-binding domain CFF04554_RS01475 IPR005982 Thioredoxin reductase CFF04554_RS01475 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CFF04554_RS01485 IPR022663 Dihydrodipicolinate reductase, C-terminal CFF04554_RS01485 IPR023940 Dihydrodipicolinate reductase CFF04554_RS01485 IPR000846 Dihydrodipicolinate reductase, N-terminal CFF04554_RS01485 IPR022664 Dihydrodipicolinate reductase, conserved site CFF04554_RS01485 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS01490 IPR005854 Amidophosphoribosyltransferase CFF04554_RS01490 IPR035584 Amidophosphoribosyltransferase, N-terminal CFF04554_RS01490 IPR029057 Phosphoribosyltransferase-like CFF04554_RS01490 IPR017932 Glutamine amidotransferase type 2 domain CFF04554_RS01490 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS01490 IPR000836 Phosphoribosyltransferase domain CFF04554_RS01505 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CFF04554_RS01505 IPR023019 Histidine biosynthesis bifunctional protein HisIE CFF04554_RS01505 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily CFF04554_RS01505 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CFF04554_RS01505 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CFF04554_RS01505 IPR026660 Phosphoribosyl-AMP cyclohydrolase CFF04554_RS01515 IPR001544 Aminotransferase class IV CFF04554_RS01515 IPR018300 Aminotransferase, class IV, conserved site CFF04554_RS01515 IPR036038 Aminotransferase-like, PLP-dependent enzymes CFF04554_RS01515 IPR033939 Branched-chain aminotransferase CFF04554_RS01515 IPR005785 Branched-chain amino acid aminotransferase I CFF04554_RS01550 IPR024706 Peroxiredoxin, AhpC-type CFF04554_RS01550 IPR013766 Thioredoxin domain CFF04554_RS01550 IPR036249 Thioredoxin-like superfamily CFF04554_RS01550 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CFF04554_RS01560 IPR003828 Epoxyqueuosine reductase QueH CFF04554_RS01570 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CFF04554_RS01570 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CFF04554_RS01570 IPR029069 HotDog domain superfamily CFF04554_RS01575 IPR011004 Trimeric LpxA-like superfamily CFF04554_RS01575 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CFF04554_RS01575 IPR001451 Hexapeptide repeat CFF04554_RS01575 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily CFF04554_RS01575 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal CFF04554_RS01575 IPR018357 Hexapeptide transferase, conserved site CFF04554_RS01580 IPR019489 Clp ATPase, C-terminal CFF04554_RS01580 IPR010603 Zinc finger, ClpX C4-type CFF04554_RS01580 IPR004487 Clp protease, ATP-binding subunit ClpX CFF04554_RS01580 IPR003959 ATPase, AAA-type, core CFF04554_RS01580 IPR003593 AAA+ ATPase domain CFF04554_RS01580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01580 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFF04554_RS01585 IPR004753 Cell shape determining protein MreB CFF04554_RS01595 IPR036914 Methylglyoxal synthase-like domain superfamily CFF04554_RS01595 IPR011607 Methylglyoxal synthase-like domain CFF04554_RS01595 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CFF04554_RS01595 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CFF04554_RS01595 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CFF04554_RS01595 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CFF04554_RS01595 IPR016185 Pre-ATP-grasp domain superfamily CFF04554_RS01595 IPR011761 ATP-grasp fold CFF04554_RS01595 IPR006275 Carbamoyl-phosphate synthase, large subunit CFF04554_RS01595 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain CFF04554_RS01600 IPR011335 Restriction endonuclease type II-like CFF04554_RS01600 IPR007637 Restriction endonuclease, type II, DpmII-like CFF04554_RS01600 IPR021191 Restriction endonuclease, type II, DpmII CFF04554_RS01605 IPR002941 DNA methylase N-4/N-6 CFF04554_RS01605 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CFF04554_RS01605 IPR001091 Restriction/modification DNA-methylase CFF04554_RS01605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS01620 IPR013655 PAS fold-3 CFF04554_RS01620 IPR035965 PAS domain superfamily CFF04554_RS01620 IPR000700 PAS-associated, C-terminal CFF04554_RS01620 IPR001610 PAC motif CFF04554_RS01620 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS01620 IPR004090 Chemotaxis methyl-accepting receptor CFF04554_RS01620 IPR000014 PAS domain CFF04554_RS01630 IPR035985 Ubiquitin-activating enzyme CFF04554_RS01630 IPR000594 THIF-type NAD/FAD binding fold CFF04554_RS01635 IPR030048 Survival protein SurE CFF04554_RS01635 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CFF04554_RS01635 IPR036523 SurE-like phosphatase/nucleotidase superfamily CFF04554_RS01640 IPR003835 Glycosyl transferase, family 19 CFF04554_RS01645 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CFF04554_RS01645 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CFF04554_RS01645 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CFF04554_RS01645 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CFF04554_RS01645 IPR006359 Transcription elongation factor GreA CFF04554_RS01645 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CFF04554_RS01645 IPR028624 Transcription elongation factor GreA/GreB CFF04554_RS01645 IPR023459 Transcription elongation factor GreA/GreB family CFF04554_RS01650 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site CFF04554_RS01650 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 CFF04554_RS01650 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CFF04554_RS01650 IPR000534 Semialdehyde dehydrogenase, NAD-binding CFF04554_RS01650 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS01660 IPR036061 CheW-like domain superfamily CFF04554_RS01660 IPR002545 CheW-like domain CFF04554_RS01660 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS01660 IPR024181 Chemotaxis response regulator CheV CFF04554_RS01660 IPR011006 CheY-like superfamily CFF04554_RS01665 IPR003594 Histidine kinase/HSP90-like ATPase CFF04554_RS01665 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily CFF04554_RS01665 IPR011006 CheY-like superfamily CFF04554_RS01665 IPR002545 CheW-like domain CFF04554_RS01665 IPR036061 CheW-like domain superfamily CFF04554_RS01665 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFF04554_RS01665 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS01665 IPR004105 Histidine kinase CheA-like, homodimeric domain CFF04554_RS01665 IPR005467 Histidine kinase domain CFF04554_RS01665 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFF04554_RS01665 IPR036641 HPT domain superfamily CFF04554_RS01665 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CFF04554_RS01665 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFF04554_RS01670 IPR039315 Chemotaxis protein CheW CFF04554_RS01670 IPR002545 CheW-like domain CFF04554_RS01670 IPR036061 CheW-like domain superfamily CFF04554_RS01675 IPR023214 HAD superfamily CFF04554_RS01675 IPR036412 HAD-like superfamily CFF04554_RS01680 IPR004732 Transaldolase type 2 CFF04554_RS01680 IPR018225 Transaldolase, active site CFF04554_RS01680 IPR013785 Aldolase-type TIM barrel CFF04554_RS01680 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CFF04554_RS01685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01685 IPR001482 Type II/IV secretion system protein CFF04554_RS01685 IPR003593 AAA+ ATPase domain CFF04554_RS01685 IPR006321 Pilus retraction protein PilT CFF04554_RS01690 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CFF04554_RS01690 IPR029751 Ribosomal protein L25 CFF04554_RS01690 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CFF04554_RS01690 IPR037121 Ribosomal protein L25, C-terminal CFF04554_RS01690 IPR001021 Ribosomal protein L25, long-form CFF04554_RS01690 IPR020057 Ribosomal protein L25, beta domain CFF04554_RS01695 IPR001328 Peptidyl-tRNA hydrolase CFF04554_RS01695 IPR036416 Peptidyl-tRNA hydrolase superfamily CFF04554_RS01695 IPR018171 Peptidyl-tRNA hydrolase, conserved site CFF04554_RS01700 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CFF04554_RS01700 IPR029066 PLP-binding barrel CFF04554_RS01700 IPR005730 Carboxynorspermidine decarboxylase CFF04554_RS01700 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CFF04554_RS01710 IPR004536 Selenophosphate synthetase CFF04554_RS01710 IPR010918 PurM-like, C-terminal domain CFF04554_RS01710 IPR036921 PurM-like, N-terminal domain superfamily CFF04554_RS01710 IPR016188 PurM-like, N-terminal domain CFF04554_RS01710 IPR036676 PurM-like, C-terminal domain superfamily CFF04554_RS01710 IPR023061 Selenophosphate synthetase, class I CFF04554_RS01715 IPR000415 Nitroreductase-like CFF04554_RS01715 IPR029479 Nitroreductase CFF04554_RS01715 IPR033878 Nitroreductase NfsB-like CFF04554_RS01720 IPR029025 Type III secretion system substrate exporter, C-terminal CFF04554_RS01720 IPR006136 Flagellar biosynthetic protein FlhB CFF04554_RS01720 IPR006135 Type III secretion system substrate exporter CFF04554_RS01725 IPR023171 Na/H antiporter domain superfamily CFF04554_RS01725 IPR004670 Na+/H+ antiporter NhaA CFF04554_RS01730 IPR004602 UvrABC system subunit A CFF04554_RS01730 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01730 IPR017871 ABC transporter, conserved site CFF04554_RS01730 IPR041552 UvrA DNA-binding domain CFF04554_RS01730 IPR041102 UvrA, interaction domain CFF04554_RS01730 IPR003439 ABC transporter-like CFF04554_RS01735 IPR001898 Solute carrier family 13 CFF04554_RS01755 IPR015890 Chorismate-utilising enzyme, C-terminal CFF04554_RS01755 IPR006805 Anthranilate synthase component I, N-terminal CFF04554_RS01755 IPR019999 Anthranilate synthase component I-like CFF04554_RS01755 IPR005801 ADC synthase CFF04554_RS01755 IPR005256 Anthranilate synthase component I, PabB-like CFF04554_RS01760 IPR000312 Glycosyl transferase, family 3 CFF04554_RS01760 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CFF04554_RS01760 IPR017459 Glycosyl transferase family 3, N-terminal domain CFF04554_RS01760 IPR017926 Glutamine amidotransferase CFF04554_RS01760 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS01760 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CFF04554_RS01760 IPR005940 Anthranilate phosphoribosyl transferase CFF04554_RS01760 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CFF04554_RS01765 IPR013785 Aldolase-type TIM barrel CFF04554_RS01765 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CFF04554_RS01765 IPR011060 Ribulose-phosphate binding barrel CFF04554_RS01770 IPR006654 Tryptophan synthase, beta chain CFF04554_RS01770 IPR006653 Tryptophan synthase, beta chain, conserved site CFF04554_RS01770 IPR023026 Tryptophan synthase beta chain/beta chain-like CFF04554_RS01770 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS01770 IPR001926 Pyridoxal-phosphate dependent enzyme CFF04554_RS01775 IPR018204 Tryptophan synthase, alpha chain, active site CFF04554_RS01775 IPR011060 Ribulose-phosphate binding barrel CFF04554_RS01775 IPR002028 Tryptophan synthase, alpha chain CFF04554_RS01775 IPR013785 Aldolase-type TIM barrel CFF04554_RS01785 IPR007597 CheC-like protein CFF04554_RS01785 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CFF04554_RS01785 IPR012826 Flagellar motor switch FliN CFF04554_RS01785 IPR028976 CheC-like superfamily CFF04554_RS01785 IPR036429 SpoA-like superfamily CFF04554_RS01785 IPR001543 Surface presentation of antigen (SpoA) CFF04554_RS01800 IPR011867 Molybdate ABC transporter, permease protein CFF04554_RS01800 IPR035906 MetI-like superfamily CFF04554_RS01800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFF04554_RS01805 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CFF04554_RS01805 IPR003439 ABC transporter-like CFF04554_RS01805 IPR013611 Transport-associated OB, type 2 CFF04554_RS01805 IPR003593 AAA+ ATPase domain CFF04554_RS01805 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CFF04554_RS01805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01805 IPR008995 Molybdate/tungstate binding, C-terminal CFF04554_RS01805 IPR017871 ABC transporter, conserved site CFF04554_RS01815 IPR005950 Molybdate ABC transporter, substrate-binding protein CFF04554_RS01845 IPR000014 PAS domain CFF04554_RS01845 IPR035965 PAS domain superfamily CFF04554_RS01845 IPR001633 EAL domain CFF04554_RS01845 IPR005330 MHYT domain CFF04554_RS01845 IPR035919 EAL domain superfamily CFF04554_RS01845 IPR000160 GGDEF domain CFF04554_RS01845 IPR029787 Nucleotide cyclase CFF04554_RS01850 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CFF04554_RS01850 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CFF04554_RS01855 IPR033128 Adenylosuccinate synthase, active site CFF04554_RS01855 IPR042109 Adenylosuccinate synthetase, domain 1 CFF04554_RS01855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01855 IPR001114 Adenylosuccinate synthetase CFF04554_RS01855 IPR042111 Adenylosuccinate synthetase, domain 3 CFF04554_RS01855 IPR042110 Adenylosuccinate synthetase, domain 2 CFF04554_RS01855 IPR018220 Adenylosuccinate synthase, GTP-binding site CFF04554_RS01875 IPR017926 Glutamine amidotransferase CFF04554_RS01875 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CFF04554_RS01875 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CFF04554_RS01875 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CFF04554_RS01875 IPR006274 Carbamoyl-phosphate synthase, small subunit CFF04554_RS01875 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS01885 IPR003594 Histidine kinase/HSP90-like ATPase CFF04554_RS01885 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFF04554_RS01885 IPR005467 Histidine kinase domain CFF04554_RS01885 IPR000014 PAS domain CFF04554_RS01885 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFF04554_RS01885 IPR000700 PAS-associated, C-terminal CFF04554_RS01885 IPR003660 HAMP domain CFF04554_RS01885 IPR035965 PAS domain superfamily CFF04554_RS01885 IPR013767 PAS fold CFF04554_RS01885 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFF04554_RS01885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFF04554_RS01890 IPR039420 Transcriptional regulatory protein WalR-like CFF04554_RS01890 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS01890 IPR001867 OmpR/PhoB-type DNA-binding domain CFF04554_RS01890 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS01890 IPR011006 CheY-like superfamily CFF04554_RS01895 IPR023616 Cytochrome c oxidase-like, subunit I domain CFF04554_RS01895 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CFF04554_RS01895 IPR000883 Cytochrome c oxidase subunit I CFF04554_RS01895 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CFF04554_RS01895 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CFF04554_RS01910 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal CFF04554_RS01910 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily CFF04554_RS01910 IPR009056 Cytochrome c-like domain CFF04554_RS01910 IPR036909 Cytochrome c-like domain superfamily CFF04554_RS01910 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CFF04554_RS01935 IPR014017 UvrD-like DNA helicase, C-terminal CFF04554_RS01935 IPR011604 Exonuclease, phage-type/RecB, C-terminal CFF04554_RS01935 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS01935 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CFF04554_RS01935 IPR011335 Restriction endonuclease type II-like CFF04554_RS01935 IPR014016 UvrD-like helicase, ATP-binding domain CFF04554_RS01935 IPR034739 UvrD/AddA helicase, N-terminal CFF04554_RS01935 IPR014152 DNA helicase subunit AddA CFF04554_RS01935 IPR000212 DNA helicase, UvrD/REP type CFF04554_RS01940 IPR005823 Ribosomal protein L13, bacterial-type CFF04554_RS01940 IPR023563 Ribosomal protein L13, conserved site CFF04554_RS01940 IPR005822 Ribosomal protein L13 CFF04554_RS01940 IPR036899 Ribosomal protein L13 superfamily CFF04554_RS01945 IPR020574 Ribosomal protein S9, conserved site CFF04554_RS01945 IPR023035 Ribosomal protein S9, bacterial/plastid CFF04554_RS01945 IPR000754 Ribosomal protein S9 CFF04554_RS01945 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS01945 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS01950 IPR036737 OmpA-like domain superfamily CFF04554_RS01950 IPR006690 Outer membrane protein, OmpA-like, conserved site CFF04554_RS01950 IPR006665 OmpA-like domain CFF04554_RS01950 IPR006664 Outer membrane protein, bacterial CFF04554_RS01950 IPR039567 Glycine zipper domain CFF04554_RS01955 IPR010920 LSM domain superfamily CFF04554_RS01955 IPR006685 Mechanosensitive ion channel MscS CFF04554_RS01955 IPR011066 Mechanosensitive ion channel MscS, C-terminal CFF04554_RS01955 IPR006686 Mechanosensitive ion channel MscS, conserved site CFF04554_RS01955 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CFF04554_RS01955 IPR023408 Mechanosensitive ion channel MscS domain superfamily CFF04554_RS01955 IPR008910 Conserved TM helix CFF04554_RS01960 IPR023214 HAD superfamily CFF04554_RS01960 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CFF04554_RS01960 IPR041492 Haloacid dehalogenase-like hydrolase CFF04554_RS01960 IPR023733 Pyrophosphatase PpaX CFF04554_RS01960 IPR006439 HAD hydrolase, subfamily IA CFF04554_RS01960 IPR036412 HAD-like superfamily CFF04554_RS01965 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS01965 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS01965 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CFF04554_RS01965 IPR037112 Pyruvate-flavodoxin oxidoreductase, EKR domain superfamily CFF04554_RS01965 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain CFF04554_RS01965 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CFF04554_RS01965 IPR011895 Pyruvate-flavodoxin oxidoreductase CFF04554_RS01965 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CFF04554_RS01965 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS01965 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CFF04554_RS01965 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CFF04554_RS01965 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CFF04554_RS01985 IPR008439 Campylobacter major outer membrane CFF04554_RS01990 IPR008439 Campylobacter major outer membrane CFF04554_RS02000 IPR028081 Leucine-binding protein domain CFF04554_RS02000 IPR000709 Leu/Ile/Val-binding protein CFF04554_RS02000 IPR028082 Periplasmic binding protein-like I CFF04554_RS02005 IPR001851 ABC transporter, permease CFF04554_RS02010 IPR001851 ABC transporter, permease CFF04554_RS02010 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CFF04554_RS02015 IPR017871 ABC transporter, conserved site CFF04554_RS02015 IPR003439 ABC transporter-like CFF04554_RS02015 IPR003593 AAA+ ATPase domain CFF04554_RS02015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02015 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CFF04554_RS02020 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein CFF04554_RS02020 IPR003439 ABC transporter-like CFF04554_RS02020 IPR017871 ABC transporter, conserved site CFF04554_RS02020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02020 IPR003593 AAA+ ATPase domain CFF04554_RS02025 IPR007816 ResB-like domain CFF04554_RS02025 IPR002541 Cytochrome c assembly protein CFF04554_RS02035 IPR007686 YutG/PgpA domain CFF04554_RS02035 IPR036681 PgpA-like superfamily CFF04554_RS02035 IPR026037 Phosphatidylglycerophosphatase A CFF04554_RS02040 IPR015947 PUA-like superfamily CFF04554_RS02040 IPR025980 ATP-sulfurylase PUA-like domain CFF04554_RS02040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS02040 IPR020792 Sulphate adenylyltransferase, prokaryotic-type CFF04554_RS02040 IPR024951 Sulphate adenylyltransferase catalytic domain CFF04554_RS02040 IPR002650 Sulphate adenylyltransferase CFF04554_RS02045 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS02045 IPR039420 Transcriptional regulatory protein WalR-like CFF04554_RS02045 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS02045 IPR011006 CheY-like superfamily CFF04554_RS02045 IPR001867 OmpR/PhoB-type DNA-binding domain CFF04554_RS02045 IPR016032 Signal transduction response regulator, C-terminal effector CFF04554_RS02050 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS02050 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CFF04554_RS02050 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CFF04554_RS02050 IPR034683 Cytidylyltransferase IspD/TarI CFF04554_RS02050 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CFF04554_RS02050 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily CFF04554_RS02050 IPR026596 Bifunctional enzyme IspD/IspF CFF04554_RS02055 IPR038521 ThiC/Bza superfamily CFF04554_RS02055 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B CFF04554_RS02055 IPR037509 Phosphomethylpyrimidine synthase CFF04554_RS02060 IPR002744 MIP18 family-like CFF04554_RS02060 IPR034904 Fe-S cluster assembly domain superfamily CFF04554_RS02060 IPR000808 Mrp, conserved site CFF04554_RS02060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02060 IPR019591 Mrp/NBP35 ATP-binding protein CFF04554_RS02060 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CFF04554_RS02065 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family CFF04554_RS02065 IPR011004 Trimeric LpxA-like superfamily CFF04554_RS02065 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily CFF04554_RS02065 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain CFF04554_RS02065 IPR001451 Hexapeptide repeat CFF04554_RS02070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02070 IPR003439 ABC transporter-like CFF04554_RS02070 IPR003593 AAA+ ATPase domain CFF04554_RS02070 IPR032781 ABC-transporter extension domain CFF04554_RS02075 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS02075 IPR012675 Beta-grasp domain superfamily CFF04554_RS02075 IPR009051 Alpha-helical ferredoxin CFF04554_RS02075 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CFF04554_RS02075 IPR036010 2Fe-2S ferredoxin-like superfamily CFF04554_RS02075 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CFF04554_RS02075 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CFF04554_RS02075 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CFF04554_RS02075 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS02080 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CFF04554_RS02080 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CFF04554_RS02080 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CFF04554_RS02080 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CFF04554_RS02080 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CFF04554_RS02080 IPR036188 FAD/NAD(P)-binding domain superfamily CFF04554_RS02080 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CFF04554_RS02085 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CFF04554_RS02085 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CFF04554_RS02085 IPR004224 Fumarate reductase type B, transmembrane subunit CFF04554_RS02090 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CFF04554_RS02100 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CFF04554_RS02100 IPR017961 DNA polymerase, Y-family, little finger domain CFF04554_RS02100 IPR022880 DNA polymerase IV CFF04554_RS02100 IPR024728 DNA polymerase type-Y, HhH motif CFF04554_RS02100 IPR001126 UmuC domain CFF04554_RS02105 IPR036412 HAD-like superfamily CFF04554_RS02105 IPR008250 P-type ATPase, A domain superfamily CFF04554_RS02105 IPR023298 P-type ATPase, transmembrane domain superfamily CFF04554_RS02105 IPR017969 Heavy-metal-associated, conserved site CFF04554_RS02105 IPR006122 Heavy metal-associated domain, copper ion-binding CFF04554_RS02105 IPR006121 Heavy metal-associated domain, HMA CFF04554_RS02105 IPR036163 Heavy metal-associated domain superfamily CFF04554_RS02105 IPR027256 P-type ATPase, subfamily IB CFF04554_RS02105 IPR023214 HAD superfamily CFF04554_RS02105 IPR001757 P-type ATPase CFF04554_RS02105 IPR023299 P-type ATPase, cytoplasmic domain N CFF04554_RS02105 IPR018303 P-type ATPase, phosphorylation site CFF04554_RS02120 IPR004694 Hydroxy amino acid transporter CFF04554_RS02120 IPR018227 Amino acid/polyamine transporter 2 CFF04554_RS02125 IPR029072 YebC-like CFF04554_RS02125 IPR026564 Transcriptional regulator TACO1-like, domain 3 CFF04554_RS02125 IPR002876 Transcriptional regulator TACO1-like CFF04554_RS02125 IPR017856 Integrase-like, N-terminal CFF04554_RS02130 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CFF04554_RS02130 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CFF04554_RS02130 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CFF04554_RS02130 IPR029000 Cyclophilin-like domain superfamily CFF04554_RS02135 IPR023954 C4-dicarboxylate transport protein CFF04554_RS02135 IPR001991 Sodium:dicarboxylate symporter CFF04554_RS02135 IPR018107 Sodium:dicarboxylate symporter, conserved site CFF04554_RS02135 IPR036458 Sodium:dicarboxylate symporter superfamily CFF04554_RS02140 IPR018490 Cyclic nucleotide-binding-like CFF04554_RS02140 IPR000595 Cyclic nucleotide-binding domain CFF04554_RS02140 IPR012318 Crp-type HTH domain CFF04554_RS02140 IPR014710 RmlC-like jelly roll fold CFF04554_RS02140 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS02140 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS02145 IPR006657 Molybdopterin dinucleotide-binding domain CFF04554_RS02145 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain CFF04554_RS02145 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase CFF04554_RS02145 IPR041460 Molybdopterin oxidoreductase, N-terminal CFF04554_RS02145 IPR006311 Twin-arginine translocation pathway, signal sequence CFF04554_RS02145 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CFF04554_RS02145 IPR006656 Molybdopterin oxidoreductase CFF04554_RS02145 IPR009010 Aspartate decarboxylase-like domain superfamily CFF04554_RS02160 IPR003593 AAA+ ATPase domain CFF04554_RS02160 IPR025944 Sigma-54 interaction domain, conserved site CFF04554_RS02160 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFF04554_RS02160 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFF04554_RS02160 IPR009057 Homeobox-like domain superfamily CFF04554_RS02160 IPR002078 RNA polymerase sigma factor 54 interaction domain CFF04554_RS02160 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS02160 IPR011006 CheY-like superfamily CFF04554_RS02160 IPR002197 DNA binding HTH domain, Fis-type CFF04554_RS02160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02165 IPR028588 Thiol:disulfide interchange protein DsbL CFF04554_RS02165 IPR013766 Thioredoxin domain CFF04554_RS02165 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CFF04554_RS02165 IPR001853 DSBA-like thioredoxin domain CFF04554_RS02165 IPR036249 Thioredoxin-like superfamily CFF04554_RS02170 IPR003752 Disulphide bond formation protein DsbB/BdbC CFF04554_RS02170 IPR023380 DsbB-like superfamily CFF04554_RS02180 IPR038477 Arylsulfotransferase, N-terminal domain superfamily CFF04554_RS02180 IPR010262 Arylsulfotransferase, bacteria CFF04554_RS02180 IPR035391 Arylsulfotransferase, Ig-like domain CFF04554_RS02180 IPR028610 Arylsulfate sulfotransferase AssT, Enterobacteria CFF04554_RS02185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02185 IPR027094 Mitofusin family CFF04554_RS02185 IPR030381 Dynamin-type guanine nucleotide-binding (G) domain CFF04554_RS02185 IPR022812 Dynamin superfamily CFF04554_RS02190 IPR022812 Dynamin superfamily CFF04554_RS02190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02200 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CFF04554_RS02200 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CFF04554_RS02200 IPR001505 Copper centre Cu(A) CFF04554_RS02200 IPR008972 Cupredoxin CFF04554_RS02200 IPR011045 Nitrous oxide reductase, N-terminal CFF04554_RS02200 IPR006311 Twin-arginine translocation pathway, signal sequence CFF04554_RS02200 IPR041142 Nitrous oxide reductase, propeller repeat 2 CFF04554_RS02200 IPR041114 Nitrous oxide reductase, propeller repeat 1 CFF04554_RS02200 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CFF04554_RS02200 IPR034205 Nitrous-oxide reductase, C-terminal CFF04554_RS02200 IPR023644 Nitrous-oxide reductase CFF04554_RS02215 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS02215 IPR004494 MauM/NapG ferredoxin-type protein CFF04554_RS02215 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS02215 IPR006311 Twin-arginine translocation pathway, signal sequence CFF04554_RS02230 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS02230 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS02230 IPR011886 Ferredoxin-type protein, NapH/MauN family CFF04554_RS02235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02235 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CFF04554_RS02235 IPR013611 Transport-associated OB, type 2 CFF04554_RS02235 IPR003439 ABC transporter-like CFF04554_RS02235 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CFF04554_RS02235 IPR017871 ABC transporter, conserved site CFF04554_RS02235 IPR008995 Molybdate/tungstate binding, C-terminal CFF04554_RS02235 IPR003593 AAA+ ATPase domain CFF04554_RS02255 IPR003660 HAMP domain CFF04554_RS02255 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFF04554_RS02255 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFF04554_RS02255 IPR005467 Histidine kinase domain CFF04554_RS02255 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFF04554_RS02255 IPR003594 Histidine kinase/HSP90-like ATPase CFF04554_RS02260 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS02260 IPR016032 Signal transduction response regulator, C-terminal effector CFF04554_RS02260 IPR001867 OmpR/PhoB-type DNA-binding domain CFF04554_RS02260 IPR039420 Transcriptional regulatory protein WalR-like CFF04554_RS02260 IPR011006 CheY-like superfamily CFF04554_RS02260 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS02285 IPR009362 YhcG PDDEXK nuclease domain CFF04554_RS02285 IPR041527 YhcG, N-terminal CFF04554_RS02300 IPR010129 Type I secretion membrane fusion protein, HlyD family CFF04554_RS02300 IPR006144 Secretion protein HlyD, conserved site CFF04554_RS02305 IPR003593 AAA+ ATPase domain CFF04554_RS02305 IPR011527 ABC transporter type 1, transmembrane domain CFF04554_RS02305 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFF04554_RS02305 IPR003439 ABC transporter-like CFF04554_RS02305 IPR017871 ABC transporter, conserved site CFF04554_RS02305 IPR010128 ATPase, type I secretion system, PrtD CFF04554_RS02305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02330 IPR002036 Endoribonuclease YbeY CFF04554_RS02330 IPR023091 Metalloprotease catalytic domain superfamily, predicted CFF04554_RS02330 IPR020549 Endoribonuclease YbeY, conserved site CFF04554_RS02345 IPR017871 ABC transporter, conserved site CFF04554_RS02345 IPR003439 ABC transporter-like CFF04554_RS02345 IPR003593 AAA+ ATPase domain CFF04554_RS02345 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl CFF04554_RS02345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02350 IPR030802 ABC transporter permease MalE CFF04554_RS02350 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CFF04554_RS02355 IPR002549 Transmembrane protein TqsA-like CFF04554_RS02360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02360 IPR008824 RuvB-like P-loop domain CFF04554_RS02360 IPR003593 AAA+ ATPase domain CFF04554_RS02360 IPR008823 RuvB C-terminal winged helix domain CFF04554_RS02360 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS02360 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS02360 IPR041445 RuvB, AAA lid domain CFF04554_RS02360 IPR004605 DNA helicase, Holliday junction RuvB-type CFF04554_RS02370 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFF04554_RS02370 IPR040442 Pyruvate kinase-like domain superfamily CFF04554_RS02370 IPR003700 Ketopantoate hydroxymethyltransferase CFF04554_RS02415 IPR041682 AAA domain, group 14 CFF04554_RS02415 IPR025420 Domain of unknown function DUF4143 CFF04554_RS02415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02425 IPR006368 GDP-mannose 4,6-dehydratase CFF04554_RS02425 IPR016040 NAD(P)-binding domain CFF04554_RS02425 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS02435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02435 IPR017871 ABC transporter, conserved site CFF04554_RS02435 IPR003439 ABC transporter-like CFF04554_RS02435 IPR003593 AAA+ ATPase domain CFF04554_RS02450 IPR003362 Bacterial sugar transferase CFF04554_RS02450 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CFF04554_RS02450 IPR017472 Undecaprenyl-phosphate galactose phosphotransferase, WbaP CFF04554_RS02455 IPR004504 DNA repair protein RadA CFF04554_RS02455 IPR003593 AAA+ ATPase domain CFF04554_RS02455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02455 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS02455 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS02455 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CFF04554_RS02455 IPR041166 LapB, rubredoxin metal binding domain CFF04554_RS02460 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CFF04554_RS02460 IPR004390 Signal-recognition particle receptor FtsY CFF04554_RS02460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02460 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CFF04554_RS02465 IPR013766 Thioredoxin domain CFF04554_RS02465 IPR036249 Thioredoxin-like superfamily CFF04554_RS02465 IPR023555 Thiol-disulphide oxidoreductase ResA CFF04554_RS02465 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CFF04554_RS02475 IPR003607 HD/PDEase domain CFF04554_RS02475 IPR006675 HDIG domain CFF04554_RS02475 IPR036612 K Homology domain, type 1 superfamily CFF04554_RS02475 IPR017705 Ribonuclease Y CFF04554_RS02475 IPR022711 Ribonuclease Y, N-terminal CFF04554_RS02475 IPR006674 HD domain CFF04554_RS02520 IPR033480 Single Cache domain 2 CFF04554_RS02520 IPR004090 Chemotaxis methyl-accepting receptor CFF04554_RS02520 IPR003660 HAMP domain CFF04554_RS02520 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS02520 IPR000727 Target SNARE coiled-coil homology domain CFF04554_RS02525 IPR005814 Aminotransferase class-III CFF04554_RS02525 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS02525 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS02525 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS02525 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA CFF04554_RS02530 IPR003265 HhH-GPD domain CFF04554_RS02530 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CFF04554_RS02530 IPR005759 Endonuclease III CFF04554_RS02530 IPR000445 Helix-hairpin-helix motif CFF04554_RS02530 IPR004036 Endonuclease III-like, conserved site-2 CFF04554_RS02530 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CFF04554_RS02530 IPR011257 DNA glycosylase CFF04554_RS02535 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CFF04554_RS02535 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CFF04554_RS02540 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype CFF04554_RS02540 IPR000771 Fructose-bisphosphate aldolase, class-II CFF04554_RS02540 IPR013785 Aldolase-type TIM barrel CFF04554_RS02560 IPR012131 Histidinol dehydrogenase CFF04554_RS02560 IPR022695 Histidinol dehydrogenase, monofunctional CFF04554_RS02560 IPR001692 Histidinol dehydrogenase, conserved site CFF04554_RS02560 IPR016161 Aldehyde/histidinol dehydrogenase CFF04554_RS02565 IPR001029 Flagellin, D0/D1 domain CFF04554_RS02575 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CFF04554_RS02575 IPR007630 RNA polymerase sigma-70 region 4 CFF04554_RS02575 IPR007624 RNA polymerase sigma-70 region 3 CFF04554_RS02575 IPR013325 RNA polymerase sigma factor, region 2 CFF04554_RS02575 IPR013324 RNA polymerase sigma factor, region 3/4-like CFF04554_RS02575 IPR007627 RNA polymerase sigma-70 region 2 CFF04554_RS02575 IPR028630 RNA polymerase sigma factor RpoD CFF04554_RS02575 IPR009042 RNA polymerase sigma-70 region 1.2 CFF04554_RS02575 IPR000943 RNA polymerase sigma-70 CFF04554_RS02575 IPR014284 RNA polymerase sigma-70 like domain CFF04554_RS02575 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS02580 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS02580 IPR012834 Flagellar basal-body rod FlgG CFF04554_RS02580 IPR019776 Flagellar basal body rod protein, conserved site CFF04554_RS02580 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CFF04554_RS02580 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CFF04554_RS02580 IPR001444 Flagellar basal body rod protein, N-terminal CFF04554_RS02585 IPR012834 Flagellar basal-body rod FlgG CFF04554_RS02585 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CFF04554_RS02585 IPR001444 Flagellar basal body rod protein, N-terminal CFF04554_RS02585 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS02585 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CFF04554_RS02585 IPR019776 Flagellar basal body rod protein, conserved site CFF04554_RS02590 IPR004923 Iron permease FTR1/Fip1/EfeU CFF04554_RS02595 IPR018470 Periplasmic metal-binding protein Tp34-type CFF04554_RS02595 IPR038482 Periplasmic metal-binding protein tp34-type superfamily CFF04554_RS02615 IPR003593 AAA+ ATPase domain CFF04554_RS02615 IPR003439 ABC transporter-like CFF04554_RS02615 IPR017871 ABC transporter, conserved site CFF04554_RS02615 IPR017911 ABC transporter, macrolide export, ATP-binding domain CFF04554_RS02615 IPR025857 MacB-like periplasmic core domain CFF04554_RS02615 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02615 IPR003838 ABC transporter permease protein domain CFF04554_RS02625 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type CFF04554_RS02625 IPR017754 Agmatine deiminase CFF04554_RS02630 IPR023783 Cation efflux pump FieF CFF04554_RS02630 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CFF04554_RS02630 IPR027470 Cation efflux protein, cytoplasmic domain CFF04554_RS02630 IPR002524 Cation efflux protein CFF04554_RS02630 IPR027469 Cation efflux transmembrane domain superfamily CFF04554_RS02635 IPR036526 Carbon-nitrogen hydrolase superfamily CFF04554_RS02635 IPR003010 Carbon-nitrogen hydrolase CFF04554_RS02640 IPR004445 Sodium/glutamate symport carrier protein GltS CFF04554_RS02660 IPR016032 Signal transduction response regulator, C-terminal effector CFF04554_RS02660 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS02660 IPR039420 Transcriptional regulatory protein WalR-like CFF04554_RS02660 IPR001867 OmpR/PhoB-type DNA-binding domain CFF04554_RS02660 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS02660 IPR011006 CheY-like superfamily CFF04554_RS02665 IPR020846 Major facilitator superfamily domain CFF04554_RS02665 IPR036259 MFS transporter superfamily CFF04554_RS02665 IPR005829 Sugar transporter, conserved site CFF04554_RS02665 IPR036292 Proline/betaine transporter ProP, C-terminal CFF04554_RS02665 IPR015041 Osmosensory transporter coiled coil CFF04554_RS02665 IPR005828 Major facilitator, sugar transporter-like CFF04554_RS02665 IPR004736 MFS transporter, metabolite:H symporter CFF04554_RS02670 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CFF04554_RS02670 IPR003593 AAA+ ATPase domain CFF04554_RS02670 IPR032524 ABC transporter Uup, C-terminal CFF04554_RS02670 IPR032781 ABC-transporter extension domain CFF04554_RS02670 IPR003439 ABC transporter-like CFF04554_RS02670 IPR017871 ABC transporter, conserved site CFF04554_RS02670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02675 IPR000175 Sodium:neurotransmitter symporter CFF04554_RS02675 IPR037272 Sodium:neurotransmitter symporter superfamily CFF04554_RS02680 IPR032456 CAAX prenyl protease 1, N-terminal CFF04554_RS02680 IPR001915 Peptidase M48 CFF04554_RS02680 IPR027057 CAAX prenyl protease 1 CFF04554_RS02685 IPR004556 Methyltransferase HemK-like CFF04554_RS02685 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CFF04554_RS02685 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CFF04554_RS02685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02685 IPR007848 Methyltransferase small domain CFF04554_RS02685 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CFF04554_RS02700 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CFF04554_RS02700 IPR029069 HotDog domain superfamily CFF04554_RS02700 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CFF04554_RS02700 IPR006683 Thioesterase domain CFF04554_RS02720 IPR029020 Ammonium/urea transporter CFF04554_RS02720 IPR018047 Ammonium transporter, conserved site CFF04554_RS02720 IPR024041 Ammonium transporter AmtB-like domain CFF04554_RS02720 IPR001905 Ammonium transporter CFF04554_RS02725 IPR017918 Nitrogen regulatory protein PII, conserved site CFF04554_RS02725 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CFF04554_RS02725 IPR011322 Nitrogen regulatory PII-like, alpha/beta CFF04554_RS02725 IPR002187 Nitrogen regulatory protein PII CFF04554_RS02730 IPR000271 Ribosomal protein L34 CFF04554_RS02730 IPR020939 Ribosomal protein L34, conserved site CFF04554_RS02735 IPR000100 Ribonuclease P CFF04554_RS02735 IPR020539 Ribonuclease P, conserved site CFF04554_RS02735 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS02735 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS02740 IPR002696 Putative membrane protein insertion efficiency factor CFF04554_RS02745 IPR028053 Membrane insertase YidC, N-terminal CFF04554_RS02745 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CFF04554_RS02745 IPR019998 Membrane insertase YidC CFF04554_RS02745 IPR038210 Membrane insertase YidC, periplasmic domain CFF04554_RS02745 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CFF04554_RS02755 IPR031168 TrmE-type guanine nucleotide-binding domain CFF04554_RS02755 IPR027368 tRNA modification GTPase MnmE domain 2 CFF04554_RS02755 IPR025867 MnmE, helical domain CFF04554_RS02755 IPR018948 GTP-binding protein TrmE, N-terminal CFF04554_RS02755 IPR006073 GTP binding domain CFF04554_RS02755 IPR005225 Small GTP-binding protein domain CFF04554_RS02755 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CFF04554_RS02755 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02755 IPR004520 tRNA modification GTPase MnmE CFF04554_RS02760 IPR010074 Phosphoribosylformylglycinamidine subunit PurL CFF04554_RS02760 IPR036921 PurM-like, N-terminal domain superfamily CFF04554_RS02760 IPR036676 PurM-like, C-terminal domain superfamily CFF04554_RS02760 IPR016188 PurM-like, N-terminal domain CFF04554_RS02760 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain CFF04554_RS02760 IPR010918 PurM-like, C-terminal domain CFF04554_RS02765 IPR008971 HSP40/DnaJ peptide-binding CFF04554_RS02765 IPR001623 DnaJ domain CFF04554_RS02765 IPR012724 Chaperone DnaJ CFF04554_RS02765 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CFF04554_RS02765 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CFF04554_RS02765 IPR036869 Chaperone J-domain superfamily CFF04554_RS02765 IPR002939 Chaperone DnaJ, C-terminal CFF04554_RS02770 IPR011607 Methylglyoxal synthase-like domain CFF04554_RS02770 IPR024051 AICAR transformylase, duplicated domain superfamily CFF04554_RS02770 IPR036914 Methylglyoxal synthase-like domain superfamily CFF04554_RS02770 IPR002695 Bifunctional purine biosynthesis protein PurH-like CFF04554_RS02770 IPR016193 Cytidine deaminase-like CFF04554_RS02785 IPR034904 Fe-S cluster assembly domain superfamily CFF04554_RS02785 IPR002744 MIP18 family-like CFF04554_RS02790 IPR003660 HAMP domain CFF04554_RS02790 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS02795 IPR036038 Aminotransferase-like, PLP-dependent enzymes CFF04554_RS02795 IPR005784 D-amino acid aminotransferase CFF04554_RS02795 IPR018300 Aminotransferase, class IV, conserved site CFF04554_RS02795 IPR001544 Aminotransferase class IV CFF04554_RS02815 IPR002903 Ribosomal RNA small subunit methyltransferase H CFF04554_RS02815 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CFF04554_RS02815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS02825 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CFF04554_RS02825 IPR027304 Trigger factor/SurA domain superfamily CFF04554_RS02825 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CFF04554_RS02830 IPR020823 Cell division protein FtsA CFF04554_RS02830 IPR003494 SHS2 domain inserted in FtsA CFF04554_RS02835 IPR000158 Cell division protein FtsZ CFF04554_RS02835 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CFF04554_RS02835 IPR003008 Tubulin/FtsZ, GTPase domain CFF04554_RS02835 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CFF04554_RS02835 IPR024757 Cell division protein FtsZ, C-terminal CFF04554_RS02835 IPR008280 Tubulin/FtsZ, C-terminal CFF04554_RS02835 IPR020805 Cell division protein FtsZ, conserved site CFF04554_RS02835 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily CFF04554_RS02845 IPR003593 AAA+ ATPase domain CFF04554_RS02845 IPR003840 DNA helicase CFF04554_RS02845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02845 IPR010285 DNA helicase Pif1-like CFF04554_RS02855 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria CFF04554_RS02855 IPR029046 Lipoprotein localisation LolA/LolB/LppX CFF04554_RS02855 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CFF04554_RS02860 IPR004027 SEC-C motif CFF04554_RS02860 IPR036670 SecA, preprotein cross-linking domain superfamily CFF04554_RS02860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS02860 IPR000185 Protein translocase subunit SecA CFF04554_RS02860 IPR011115 SecA DEAD-like, N-terminal CFF04554_RS02860 IPR011130 SecA, preprotein cross-linking domain CFF04554_RS02860 IPR011116 SecA Wing/Scaffold CFF04554_RS02860 IPR036266 SecA, Wing/Scaffold superfamily CFF04554_RS02860 IPR014018 SecA motor DEAD CFF04554_RS02865 IPR025857 MacB-like periplasmic core domain CFF04554_RS02865 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type CFF04554_RS02865 IPR003838 ABC transporter permease protein domain CFF04554_RS02865 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E CFF04554_RS02880 IPR005829 Sugar transporter, conserved site CFF04554_RS02880 IPR036259 MFS transporter superfamily CFF04554_RS02880 IPR020846 Major facilitator superfamily domain CFF04554_RS02880 IPR011701 Major facilitator superfamily CFF04554_RS02890 IPR026033 Azaguanine-like transporters CFF04554_RS02890 IPR006043 Xanthine/uracil/vitamin C permease CFF04554_RS02895 IPR013785 Aldolase-type TIM barrel CFF04554_RS02895 IPR034405 F420, menaquinone cofactor biosynthesis CFF04554_RS02895 IPR020050 FO synthase, subunit 2 CFF04554_RS02895 IPR007197 Radical SAM CFF04554_RS02895 IPR022432 Aminodeoxyfutalosine synthase CFF04554_RS02895 IPR006638 Elp3/MiaB/NifB CFF04554_RS02900 IPR002912 ACT domain CFF04554_RS02900 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme CFF04554_RS02900 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CFF04554_RS02900 IPR006674 HD domain CFF04554_RS02900 IPR003607 HD/PDEase domain CFF04554_RS02905 IPR001347 Sugar isomerase (SIS) CFF04554_RS02905 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS02905 IPR035490 GlmS/FrlB, SIS domain 2 CFF04554_RS02905 IPR035466 GlmS/AgaS, SIS domain 1 CFF04554_RS02905 IPR017932 Glutamine amidotransferase type 2 domain CFF04554_RS02905 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CFF04554_RS02910 IPR007272 Sulphur transport domain CFF04554_RS02915 IPR036868 TusA-like domain superfamily CFF04554_RS02915 IPR001455 TusA-like domain CFF04554_RS02920 IPR004391 Glutamate racemase CFF04554_RS02920 IPR001920 Asp/Glu racemase CFF04554_RS02920 IPR015942 Asp/Glu/hydantoin racemase CFF04554_RS02920 IPR018187 Asp/Glu racemase, active site 1 CFF04554_RS02925 IPR022390 4-hydroxybenzoate decarboxylase subunit C CFF04554_RS02925 IPR002830 UbiD decarboxylyase family CFF04554_RS03000 IPR029787 Nucleotide cyclase CFF04554_RS03000 IPR000160 GGDEF domain CFF04554_RS03000 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS03000 IPR011006 CheY-like superfamily CFF04554_RS03010 IPR036653 CinA-like, C-terminal CFF04554_RS03010 IPR008136 CinA, C-terminal CFF04554_RS03010 IPR041424 CinA, KH domain CFF04554_RS03010 IPR008135 Competence-induced protein CinA CFF04554_RS03010 IPR036425 MoaB/Mog-like domain superfamily CFF04554_RS03010 IPR001453 MoaB/Mog domain CFF04554_RS03020 IPR023585 Isoleucine-tRNA ligase, type 1 CFF04554_RS03020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS03020 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFF04554_RS03020 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CFF04554_RS03020 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CFF04554_RS03020 IPR002300 Aminoacyl-tRNA synthetase, class Ia CFF04554_RS03020 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CFF04554_RS03020 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFF04554_RS03020 IPR002301 Isoleucine-tRNA ligase CFF04554_RS03025 IPR020556 Amidase, conserved site CFF04554_RS03025 IPR023631 Amidase signature domain CFF04554_RS03025 IPR036928 Amidase signature (AS) superfamily CFF04554_RS03025 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CFF04554_RS03025 IPR000120 Amidase CFF04554_RS03030 IPR013785 Aldolase-type TIM barrel CFF04554_RS03030 IPR000644 CBS domain CFF04554_RS03030 IPR005990 Inosine-5'-monophosphate dehydrogenase CFF04554_RS03030 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CFF04554_RS03030 IPR001093 IMP dehydrogenase/GMP reductase CFF04554_RS03035 IPR029058 Alpha/Beta hydrolase fold CFF04554_RS03035 IPR000073 Alpha/beta hydrolase fold-1 CFF04554_RS03035 IPR008220 Homoserine/serine acetyltransferase MetX-like CFF04554_RS03040 IPR037004 Exonuclease VII, small subunit superfamily CFF04554_RS03040 IPR003761 Exonuclease VII, small subunit CFF04554_RS03050 IPR004101 Mur ligase, C-terminal CFF04554_RS03050 IPR036565 Mur-like, catalytic domain superfamily CFF04554_RS03050 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CFF04554_RS03050 IPR000713 Mur ligase, N-terminal catalytic domain CFF04554_RS03050 IPR013221 Mur ligase, central CFF04554_RS03050 IPR036615 Mur ligase, C-terminal domain superfamily CFF04554_RS03060 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CFF04554_RS03060 IPR023663 NADPH dehydrogenase CFF04554_RS03060 IPR013785 Aldolase-type TIM barrel CFF04554_RS03065 IPR003593 AAA+ ATPase domain CFF04554_RS03065 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal CFF04554_RS03065 IPR024765 TOBE-like domain CFF04554_RS03065 IPR005666 Sulphate transport system permease protein 1 CFF04554_RS03065 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03065 IPR008995 Molybdate/tungstate binding, C-terminal CFF04554_RS03065 IPR003439 ABC transporter-like CFF04554_RS03065 IPR017871 ABC transporter, conserved site CFF04554_RS03065 IPR041193 CysA, C-terminal regulatory domain CFF04554_RS03070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFF04554_RS03070 IPR035906 MetI-like superfamily CFF04554_RS03090 IPR000432 DNA mismatch repair protein MutS, C-terminal CFF04554_RS03090 IPR036063 Smr domain superfamily CFF04554_RS03090 IPR002625 Smr domain CFF04554_RS03090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03090 IPR005747 Endonuclease MutS2 CFF04554_RS03090 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CFF04554_RS03090 IPR007696 DNA mismatch repair protein MutS, core CFF04554_RS03095 IPR001633 EAL domain CFF04554_RS03095 IPR035919 EAL domain superfamily CFF04554_RS03095 IPR000160 GGDEF domain CFF04554_RS03095 IPR013702 FIST domain, N-terminal CFF04554_RS03095 IPR029787 Nucleotide cyclase CFF04554_RS03095 IPR019494 FIST, C-domain CFF04554_RS03105 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CFF04554_RS03105 IPR036264 Bacterial exopeptidase dimerisation domain CFF04554_RS03105 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CFF04554_RS03105 IPR002933 Peptidase M20 CFF04554_RS03105 IPR011650 Peptidase M20, dimerisation domain CFF04554_RS03110 IPR036188 FAD/NAD(P)-binding domain superfamily CFF04554_RS03110 IPR006231 Malate:quinone-oxidoreductase CFF04554_RS03120 IPR036918 Pyruvate kinase, C-terminal domain superfamily CFF04554_RS03120 IPR015795 Pyruvate kinase, C-terminal CFF04554_RS03120 IPR015793 Pyruvate kinase, barrel CFF04554_RS03120 IPR011037 Pyruvate kinase-like, insert domain superfamily CFF04554_RS03120 IPR040442 Pyruvate kinase-like domain superfamily CFF04554_RS03120 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CFF04554_RS03120 IPR001697 Pyruvate kinase CFF04554_RS03120 IPR008279 PEP-utilising enzyme, mobile domain CFF04554_RS03120 IPR015806 Pyruvate kinase, insert domain superfamily CFF04554_RS03120 IPR036637 Phosphohistidine domain superfamily CFF04554_RS03125 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CFF04554_RS03125 IPR007863 Peptidase M16, C-terminal CFF04554_RS03130 IPR001650 Helicase, C-terminal CFF04554_RS03130 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFF04554_RS03130 IPR006935 Helicase/UvrB, N-terminal CFF04554_RS03130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03135 IPR002480 DAHP synthetase, class II CFF04554_RS03135 IPR013785 Aldolase-type TIM barrel CFF04554_RS03140 IPR016161 Aldehyde/histidinol dehydrogenase CFF04554_RS03140 IPR016163 Aldehyde dehydrogenase, C-terminal CFF04554_RS03140 IPR016162 Aldehyde dehydrogenase, N-terminal CFF04554_RS03140 IPR015590 Aldehyde dehydrogenase domain CFF04554_RS03140 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CFF04554_RS03140 IPR012134 Glutamate-5-semialdehyde dehydrogenase CFF04554_RS03140 IPR000965 GPR domain CFF04554_RS03145 IPR022890 Ferredoxin--NADP reductase, type 2 CFF04554_RS03145 IPR023753 FAD/NAD(P)-binding domain CFF04554_RS03145 IPR036188 FAD/NAD(P)-binding domain superfamily CFF04554_RS03155 IPR007848 Methyltransferase small domain CFF04554_RS03155 IPR023543 rRNA small subunit methyltransferase C CFF04554_RS03155 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CFF04554_RS03155 IPR013675 Methyltransferase small, N-terminal CFF04554_RS03155 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS03160 IPR005358 Putative zinc- or iron-chelating domain containing protein CFF04554_RS03170 IPR013798 Indole-3-glycerol phosphate synthase CFF04554_RS03170 IPR011060 Ribulose-phosphate binding barrel CFF04554_RS03170 IPR013785 Aldolase-type TIM barrel CFF04554_RS03170 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CFF04554_RS03180 IPR005583 Peroxide stress protein YaaA CFF04554_RS03215 IPR003812 Fido domain CFF04554_RS03215 IPR036597 Fido-like domain superfamily CFF04554_RS03285 IPR041533 Bartonella effector protein, BID domain CFF04554_RS03285 IPR003812 Fido domain CFF04554_RS03285 IPR036597 Fido-like domain superfamily CFF04554_RS03400 IPR005482 Biotin carboxylase, C-terminal CFF04554_RS03400 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CFF04554_RS03400 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CFF04554_RS03400 IPR011054 Rudiment single hybrid motif CFF04554_RS03400 IPR016185 Pre-ATP-grasp domain superfamily CFF04554_RS03400 IPR011761 ATP-grasp fold CFF04554_RS03400 IPR005481 Biotin carboxylase-like, N-terminal domain CFF04554_RS03400 IPR011764 Biotin carboxylation domain CFF04554_RS03410 IPR007471 N-end aminoacyl transferase, N-terminal CFF04554_RS03410 IPR007472 N-end rule aminoacyl transferase, C-terminal CFF04554_RS03410 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS03410 IPR030700 N-end rule aminoacyl transferase CFF04554_RS03410 IPR017138 Aspartate/glutamate leucyltransferase CFF04554_RS03415 IPR008971 HSP40/DnaJ peptide-binding CFF04554_RS03415 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CFF04554_RS03415 IPR036869 Chaperone J-domain superfamily CFF04554_RS03415 IPR001623 DnaJ domain CFF04554_RS03415 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CFF04554_RS03415 IPR002939 Chaperone DnaJ, C-terminal CFF04554_RS03415 IPR018253 DnaJ domain, conserved site CFF04554_RS03415 IPR012724 Chaperone DnaJ CFF04554_RS03420 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CFF04554_RS03420 IPR036130 Pyridoxine 5'-phosphate synthase CFF04554_RS03420 IPR013785 Aldolase-type TIM barrel CFF04554_RS03425 IPR005255 PdxA family CFF04554_RS03425 IPR037539 4-hydroxythreonine-4-phosphate dehydrogenase, epsilonproteobacteria CFF04554_RS03430 IPR001204 Phosphate transporter CFF04554_RS03435 IPR001029 Flagellin, D0/D1 domain CFF04554_RS03435 IPR013384 Flagellar hook-associated protein 3 CFF04554_RS03440 IPR002543 FtsK domain CFF04554_RS03440 IPR018541 FtsK gamma domain CFF04554_RS03440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03440 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS03440 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS03440 IPR041027 FtsK alpha domain CFF04554_RS03455 IPR000092 Polyprenyl synthetase CFF04554_RS03455 IPR033749 Polyprenyl synthetase, conserved site CFF04554_RS03455 IPR008949 Isoprenoid synthase domain superfamily CFF04554_RS03460 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CFF04554_RS03460 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily CFF04554_RS03460 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS03460 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CFF04554_RS03460 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CFF04554_RS03460 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CFF04554_RS03460 IPR018214 Glutamyl-tRNA reductase, conserved site CFF04554_RS03460 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily CFF04554_RS03465 IPR002316 Proline-tRNA ligase, class IIa CFF04554_RS03465 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CFF04554_RS03465 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CFF04554_RS03465 IPR004154 Anticodon-binding CFF04554_RS03465 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CFF04554_RS03465 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CFF04554_RS03465 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CFF04554_RS03465 IPR033730 Prokaryote proline-tRNA ligase core domain CFF04554_RS03465 IPR006195 Aminoacyl-tRNA synthetase, class II CFF04554_RS03465 IPR036621 Anticodon-binding domain superfamily CFF04554_RS03475 IPR022418 Porphobilinogen deaminase, C-terminal CFF04554_RS03475 IPR000860 Porphobilinogen deaminase CFF04554_RS03475 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CFF04554_RS03475 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CFF04554_RS03475 IPR022417 Porphobilinogen deaminase, N-terminal CFF04554_RS03480 IPR023679 Uncharacterised protein family UPF0761, bacterial CFF04554_RS03480 IPR017039 Virulence factor BrkB CFF04554_RS03485 IPR006094 FAD linked oxidase, N-terminal CFF04554_RS03485 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CFF04554_RS03485 IPR036318 FAD-binding, type PCMH-like superfamily CFF04554_RS03485 IPR004490 Glycolate oxidase subunit GlcD CFF04554_RS03485 IPR016166 FAD-binding domain, PCMH-type CFF04554_RS03485 IPR004113 FAD-linked oxidase, C-terminal CFF04554_RS03485 IPR016164 FAD-linked oxidase-like, C-terminal CFF04554_RS03495 IPR016047 Peptidase M23 CFF04554_RS03495 IPR013731 Opacity-associated protein A, N-terminal CFF04554_RS03495 IPR011055 Duplicated hybrid motif CFF04554_RS03495 IPR018392 LysM domain CFF04554_RS03500 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily CFF04554_RS03500 IPR006669 Magnesium transporter MgtE CFF04554_RS03500 IPR038048 Magnesium transporter MgtE, transmembrane domain CFF04554_RS03500 IPR038076 MgtE, N-terminal domain superfamily CFF04554_RS03500 IPR006668 Magnesium transporter, MgtE intracellular domain CFF04554_RS03500 IPR006667 SLC41 divalent cation transporters, integral membrane domain CFF04554_RS03500 IPR000644 CBS domain CFF04554_RS03505 IPR004385 Nucleoside diphosphate pyrophosphatase CFF04554_RS03505 IPR015797 NUDIX hydrolase-like domain superfamily CFF04554_RS03505 IPR000086 NUDIX hydrolase domain CFF04554_RS03515 IPR011032 GroES-like superfamily CFF04554_RS03515 IPR037124 GroES chaperonin superfamily CFF04554_RS03515 IPR020818 GroES chaperonin family CFF04554_RS03520 IPR027409 GroEL-like apical domain superfamily CFF04554_RS03520 IPR027413 GroEL-like equatorial domain superfamily CFF04554_RS03520 IPR001844 Chaperonin Cpn60 CFF04554_RS03520 IPR018370 Chaperonin Cpn60, conserved site CFF04554_RS03520 IPR002423 Chaperonin Cpn60/TCP-1 family CFF04554_RS03520 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CFF04554_RS03525 IPR001015 Ferrochelatase CFF04554_RS03525 IPR033644 Ferrochelatase, C-terminal CFF04554_RS03525 IPR033659 Ferrochelatase, N-terminal CFF04554_RS03525 IPR019772 Ferrochelatase, active site CFF04554_RS03530 IPR037532 Peptidoglycan D,D-transpeptidase FtsI CFF04554_RS03530 IPR005311 Penicillin-binding protein, dimerisation domain CFF04554_RS03530 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CFF04554_RS03530 IPR001460 Penicillin-binding protein, transpeptidase CFF04554_RS03530 IPR012338 Beta-lactamase/transpeptidase-like CFF04554_RS03535 IPR001624 Flagellar hook-basal body complex protein FliE CFF04554_RS03540 IPR001444 Flagellar basal body rod protein, N-terminal CFF04554_RS03540 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS03540 IPR019776 Flagellar basal body rod protein, conserved site CFF04554_RS03540 IPR006299 Flagellar basal-body rod protein FlgC CFF04554_RS03545 IPR001444 Flagellar basal body rod protein, N-terminal CFF04554_RS03545 IPR006300 Flagellar basal-body rod protein FlgB CFF04554_RS03550 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal CFF04554_RS03550 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS03550 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase CFF04554_RS03560 IPR028299 ClpA/B, conserved site 2 CFF04554_RS03560 IPR041546 ClpA/ClpB, AAA lid domain CFF04554_RS03560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03560 IPR018368 ClpA/B, conserved site 1 CFF04554_RS03560 IPR001270 ClpA/B family CFF04554_RS03560 IPR004176 Clp, N-terminal CFF04554_RS03560 IPR036628 Clp, N-terminal domain superfamily CFF04554_RS03560 IPR019489 Clp ATPase, C-terminal CFF04554_RS03560 IPR003959 ATPase, AAA-type, core CFF04554_RS03560 IPR003593 AAA+ ATPase domain CFF04554_RS03560 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CFF04554_RS03565 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CFF04554_RS03565 IPR003769 Adaptor protein ClpS, core CFF04554_RS03565 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CFF04554_RS03575 IPR020081 SsrA-binding protein, conserved site CFF04554_RS03575 IPR000037 SsrA-binding protein CFF04554_RS03575 IPR023620 Small protein B CFF04554_RS03580 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS03580 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS03580 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CFF04554_RS03580 IPR036554 GHMP kinase, C-terminal domain superfamily CFF04554_RS03580 IPR006204 GHMP kinase N-terminal domain CFF04554_RS03585 IPR036107 Carbon storage regulator superfamily CFF04554_RS03585 IPR003751 Translational regulator CsrA CFF04554_RS03590 IPR002501 Pseudouridine synthase II, N-terminal CFF04554_RS03590 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFF04554_RS03590 IPR014780 tRNA pseudouridine synthase II, TruB CFF04554_RS03595 IPR005751 ATP-dependent DNA helicase PcrA CFF04554_RS03595 IPR013986 DExx box DNA helicase domain superfamily CFF04554_RS03595 IPR014017 UvrD-like DNA helicase, C-terminal CFF04554_RS03595 IPR000212 DNA helicase, UvrD/REP type CFF04554_RS03595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03595 IPR014016 UvrD-like helicase, ATP-binding domain CFF04554_RS03595 IPR034739 UvrD/AddA helicase, N-terminal CFF04554_RS03600 IPR000847 Transcription regulator HTH, LysR CFF04554_RS03600 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS03600 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS03615 IPR001991 Sodium:dicarboxylate symporter CFF04554_RS03615 IPR036458 Sodium:dicarboxylate symporter superfamily CFF04554_RS03615 IPR023025 Serine/threonine transporter SstT CFF04554_RS03620 IPR022631 S-adenosylmethionine synthetase, conserved site CFF04554_RS03620 IPR022629 S-adenosylmethionine synthetase, central domain CFF04554_RS03620 IPR022628 S-adenosylmethionine synthetase, N-terminal CFF04554_RS03620 IPR002133 S-adenosylmethionine synthetase CFF04554_RS03620 IPR022636 S-adenosylmethionine synthetase superfamily CFF04554_RS03620 IPR022630 S-adenosylmethionine synthetase, C-terminal CFF04554_RS03625 IPR006129 Adhesin B CFF04554_RS03625 IPR006128 Adhesion lipoprotein CFF04554_RS03625 IPR006127 Periplasmic solute binding protein, ZnuA-like CFF04554_RS03630 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03630 IPR003439 ABC transporter-like CFF04554_RS03630 IPR003593 AAA+ ATPase domain CFF04554_RS03630 IPR017871 ABC transporter, conserved site CFF04554_RS03635 IPR037294 ABC transporter, BtuC-like CFF04554_RS03635 IPR001626 ABC transporter, TroCD-like CFF04554_RS03640 IPR001626 ABC transporter, TroCD-like CFF04554_RS03640 IPR037294 ABC transporter, BtuC-like CFF04554_RS03645 IPR036526 Carbon-nitrogen hydrolase superfamily CFF04554_RS03645 IPR003010 Carbon-nitrogen hydrolase CFF04554_RS03645 IPR004563 Apolipoprotein N-acyltransferase CFF04554_RS03650 IPR003849 Preprotein translocase YajC CFF04554_RS03655 IPR001036 Acriflavin resistance protein CFF04554_RS03655 IPR005791 Protein translocase subunit SecD CFF04554_RS03655 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CFF04554_RS03655 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CFF04554_RS03660 IPR005665 Protein-export membrane protein SecF, bacterial CFF04554_RS03660 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CFF04554_RS03660 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CFF04554_RS03660 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CFF04554_RS03670 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CFF04554_RS03670 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFF04554_RS03670 IPR002300 Aminoacyl-tRNA synthetase, class Ia CFF04554_RS03670 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS03670 IPR025709 Leucyl-tRNA synthetase, editing domain CFF04554_RS03670 IPR015413 Methionyl/Leucyl tRNA synthetase CFF04554_RS03670 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFF04554_RS03670 IPR002302 Leucine-tRNA ligase CFF04554_RS03680 IPR000160 GGDEF domain CFF04554_RS03680 IPR029787 Nucleotide cyclase CFF04554_RS03685 IPR013221 Mur ligase, central CFF04554_RS03685 IPR004101 Mur ligase, C-terminal CFF04554_RS03685 IPR036565 Mur-like, catalytic domain superfamily CFF04554_RS03685 IPR036615 Mur ligase, C-terminal domain superfamily CFF04554_RS03685 IPR018109 Folylpolyglutamate synthetase, conserved site CFF04554_RS03685 IPR001645 Folylpolyglutamate synthetase CFF04554_RS03690 IPR007340 Opacity-associated protein A CFF04554_RS03690 IPR011055 Duplicated hybrid motif CFF04554_RS03690 IPR016047 Peptidase M23 CFF04554_RS03700 IPR004576 Transcription-repair coupling factor CFF04554_RS03700 IPR011545 DEAD/DEAH box helicase domain CFF04554_RS03700 IPR001650 Helicase, C-terminal CFF04554_RS03700 IPR003711 CarD-like/TRCF domain CFF04554_RS03700 IPR036101 CarD-like/TRCF domain superfamily CFF04554_RS03700 IPR037235 TRCF-like, C-terminal domain CFF04554_RS03700 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFF04554_RS03700 IPR041471 UvrB, interaction domain CFF04554_RS03700 IPR005118 Transcription-repair-coupling factor, C-terminal domain CFF04554_RS03700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03725 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS03725 IPR003781 CoA-binding CFF04554_RS03730 IPR001926 Pyridoxal-phosphate dependent enzyme CFF04554_RS03730 IPR002912 ACT domain CFF04554_RS03730 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CFF04554_RS03730 IPR005789 Threonine dehydratase, catabolic CFF04554_RS03730 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS03735 IPR011050 Pectin lyase fold/virulence factor CFF04554_RS03735 IPR012334 Pectin lyase fold CFF04554_RS03735 IPR025157 Hemagglutinin repeat CFF04554_RS03735 IPR008619 Filamentous haemagglutinin repeat CFF04554_RS03735 IPR024973 ESPR domain CFF04554_RS03735 IPR008638 Filamentous haemagglutinin, N-terminal CFF04554_RS03735 IPR033806 CDI toxin, Bp1026b-like CFF04554_RS03735 IPR040559 tRNA nuclease CdiA, C-terminal CFF04554_RS03750 IPR001406 Pseudouridine synthase I, TruA CFF04554_RS03750 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFF04554_RS03750 IPR020095 Pseudouridine synthase I, TruA, C-terminal CFF04554_RS03750 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CFF04554_RS03760 IPR014032 Peptidase A24A, prepilin type IV, bacterial CFF04554_RS03760 IPR010627 Peptidase A24A, N-terminal CFF04554_RS03760 IPR000045 Prepilin type IV endopeptidase, peptidase domain CFF04554_RS03765 IPR001441 Decaprenyl diphosphate synthase-like CFF04554_RS03765 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CFF04554_RS03765 IPR036424 Decaprenyl diphosphate synthase-like superfamily CFF04554_RS03775 IPR003382 Flavoprotein CFF04554_RS03775 IPR036551 Flavin prenyltransferase-like CFF04554_RS03775 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CFF04554_RS03775 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CFF04554_RS03775 IPR035929 CoaB-like superfamily CFF04554_RS03780 IPR025877 MobA-like NTP transferase CFF04554_RS03780 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS03780 IPR011004 Trimeric LpxA-like superfamily CFF04554_RS03780 IPR001451 Hexapeptide repeat CFF04554_RS03780 IPR038009 GlmU, C-terminal LbH domain CFF04554_RS03780 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CFF04554_RS03785 IPR005837 Flagellar transport protein FliP CFF04554_RS03785 IPR005838 Type III secretion system inner membrane P protein CFF04554_RS03800 IPR023515 Quinolinate synthase A, type 3 CFF04554_RS03800 IPR036094 Quinolinate synthetase A superfamily CFF04554_RS03800 IPR003473 Quinolinate synthetase A CFF04554_RS03805 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CFF04554_RS03805 IPR030190 Macrolide export protein MacA CFF04554_RS03805 IPR006143 RND efflux pump, membrane fusion protein CFF04554_RS03810 IPR017911 ABC transporter, macrolide export, ATP-binding domain CFF04554_RS03810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03810 IPR003593 AAA+ ATPase domain CFF04554_RS03810 IPR025857 MacB-like periplasmic core domain CFF04554_RS03810 IPR017871 ABC transporter, conserved site CFF04554_RS03810 IPR003838 ABC transporter permease protein domain CFF04554_RS03810 IPR003439 ABC transporter-like CFF04554_RS03815 IPR010131 RND efflux system, outer membrane lipoprotein, NodT CFF04554_RS03815 IPR003423 Outer membrane efflux protein CFF04554_RS03825 IPR003660 HAMP domain CFF04554_RS03825 IPR003594 Histidine kinase/HSP90-like ATPase CFF04554_RS03825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFF04554_RS03825 IPR005467 Histidine kinase domain CFF04554_RS03825 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFF04554_RS03825 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFF04554_RS03830 IPR039420 Transcriptional regulatory protein WalR-like CFF04554_RS03830 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS03830 IPR001867 OmpR/PhoB-type DNA-binding domain CFF04554_RS03830 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS03830 IPR011006 CheY-like superfamily CFF04554_RS03830 IPR016032 Signal transduction response regulator, C-terminal effector CFF04554_RS03835 IPR001940 Peptidase S1C CFF04554_RS03835 IPR009003 Peptidase S1, PA clan CFF04554_RS03835 IPR011782 Peptidase S1C, Do CFF04554_RS03835 IPR001478 PDZ domain CFF04554_RS03835 IPR036034 PDZ superfamily CFF04554_RS03835 IPR041489 PDZ domain 6 CFF04554_RS03840 IPR002939 Chaperone DnaJ, C-terminal CFF04554_RS03840 IPR001623 DnaJ domain CFF04554_RS03840 IPR018253 DnaJ domain, conserved site CFF04554_RS03840 IPR008971 HSP40/DnaJ peptide-binding CFF04554_RS03840 IPR036869 Chaperone J-domain superfamily CFF04554_RS03845 IPR009061 Putative DNA-binding domain superfamily CFF04554_RS03845 IPR000551 MerR-type HTH domain CFF04554_RS03850 IPR038770 Sodium/solute symporter superfamily CFF04554_RS03850 IPR003148 Regulator of K+ conductance, N-terminal CFF04554_RS03850 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS03850 IPR004771 K+/H+ exchanger CFF04554_RS03850 IPR006153 Cation/H+ exchanger CFF04554_RS03855 IPR006153 Cation/H+ exchanger CFF04554_RS03855 IPR005170 Transporter-associated domain CFF04554_RS03855 IPR036318 FAD-binding, type PCMH-like superfamily CFF04554_RS03855 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CFF04554_RS03855 IPR016169 FAD-binding, type PCMH, subdomain 2 CFF04554_RS03855 IPR038770 Sodium/solute symporter superfamily CFF04554_RS03855 IPR030151 K(+)/H(+) antiporter NhaP CFF04554_RS03855 IPR023729 K(+)/H(+) antiporter NhaP2 CFF04554_RS03855 IPR006037 Regulator of K+ conductance, C-terminal CFF04554_RS03865 IPR002781 Transmembrane protein TauE-like CFF04554_RS03870 IPR035908 ATP synthase, F0 complex, subunit A superfamily CFF04554_RS03870 IPR023011 ATP synthase, F0 complex, subunit A, active site CFF04554_RS03870 IPR000568 ATP synthase, F0 complex, subunit A CFF04554_RS03880 IPR034291 Thiamine phosphate synthase CFF04554_RS03880 IPR022998 Thiamine phosphate synthase/TenI CFF04554_RS03880 IPR036206 Thiamin phosphate synthase superfamily CFF04554_RS03880 IPR013785 Aldolase-type TIM barrel CFF04554_RS03885 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site CFF04554_RS03885 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic CFF04554_RS03885 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CFF04554_RS03885 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 CFF04554_RS03885 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CFF04554_RS03885 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit CFF04554_RS03885 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CFF04554_RS03885 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E CFF04554_RS03885 IPR018027 Asn/Gln amidotransferase CFF04554_RS03890 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFF04554_RS03890 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CFF04554_RS03890 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CFF04554_RS03890 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CFF04554_RS03890 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CFF04554_RS03890 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS03895 IPR022956 Beta-hexosaminidase, bacterial CFF04554_RS03895 IPR017853 Glycoside hydrolase superfamily CFF04554_RS03895 IPR019800 Glycoside hydrolase, family 3, active site CFF04554_RS03895 IPR001764 Glycoside hydrolase, family 3, N-terminal CFF04554_RS03895 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily CFF04554_RS03905 IPR004626 RarD protein CFF04554_RS03905 IPR000620 EamA domain CFF04554_RS03910 IPR017871 ABC transporter, conserved site CFF04554_RS03910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03910 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CFF04554_RS03910 IPR003593 AAA+ ATPase domain CFF04554_RS03910 IPR003439 ABC transporter-like CFF04554_RS03915 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFF04554_RS03915 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFF04554_RS03915 IPR035906 MetI-like superfamily CFF04554_RS03920 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFF04554_RS03920 IPR018313 Solute-binding protein family 3, conserved site CFF04554_RS03925 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CFF04554_RS03925 IPR000462 CDP-alcohol phosphatidyltransferase CFF04554_RS03930 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS03930 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS03935 IPR020624 Schiff base-forming aldolase, conserved site CFF04554_RS03935 IPR002220 DapA-like CFF04554_RS03935 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CFF04554_RS03935 IPR013785 Aldolase-type TIM barrel CFF04554_RS03935 IPR020625 Schiff base-forming aldolase, active site CFF04554_RS03940 IPR001431 Peptidase M16, zinc-binding site CFF04554_RS03940 IPR011765 Peptidase M16, N-terminal CFF04554_RS03940 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CFF04554_RS03940 IPR007863 Peptidase M16, C-terminal CFF04554_RS03945 IPR005719 Dihydroorotate dehydrogenase, class 2 CFF04554_RS03945 IPR013785 Aldolase-type TIM barrel CFF04554_RS03945 IPR005720 Dihydroorotate dehydrogenase domain CFF04554_RS03945 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CFF04554_RS03945 IPR001295 Dihydroorotate dehydrogenase, conserved site CFF04554_RS03950 IPR039421 Type I protein exporter CFF04554_RS03950 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS03950 IPR011917 ABC transporter, lipid A export, MsbA CFF04554_RS03950 IPR017871 ABC transporter, conserved site CFF04554_RS03950 IPR011527 ABC transporter type 1, transmembrane domain CFF04554_RS03950 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFF04554_RS03950 IPR003439 ABC transporter-like CFF04554_RS03950 IPR003593 AAA+ ATPase domain CFF04554_RS03955 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS03955 IPR032678 tRNA synthetases class I, catalytic domain CFF04554_RS03955 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFF04554_RS03955 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CFF04554_RS03955 IPR015803 Cysteine-tRNA ligase CFF04554_RS03955 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CFF04554_RS03960 IPR004268 Peptidoglycan biosynthesis protein MurJ CFF04554_RS03985 IPR028343 Fructose-1,6-bisphosphatase CFF04554_RS03985 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal CFF04554_RS03985 IPR000146 Fructose-1,6-bisphosphatase class 1 CFF04554_RS03985 IPR023079 Sedoheptulose-1,7-bisphosphatase CFF04554_RS03995 IPR014758 Methionyl-tRNA synthetase CFF04554_RS03995 IPR002300 Aminoacyl-tRNA synthetase, class Ia CFF04554_RS03995 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CFF04554_RS03995 IPR023457 Methionine-tRNA synthetase, type 2 CFF04554_RS03995 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFF04554_RS03995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS03995 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS03995 IPR033911 Methioninyl-tRNA synthetase core domain CFF04554_RS03995 IPR015413 Methionyl/Leucyl tRNA synthetase CFF04554_RS03995 IPR002547 tRNA-binding domain CFF04554_RS04020 IPR006638 Elp3/MiaB/NifB CFF04554_RS04020 IPR022431 Cyclic dehypoxanthine futalosine synthase CFF04554_RS04020 IPR034405 F420, menaquinone cofactor biosynthesis CFF04554_RS04020 IPR013785 Aldolase-type TIM barrel CFF04554_RS04020 IPR020050 FO synthase, subunit 2 CFF04554_RS04020 IPR007197 Radical SAM CFF04554_RS04035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04035 IPR000780 MCP methyltransferase, CheR-type CFF04554_RS04035 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CFF04554_RS04040 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS04040 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CFF04554_RS04040 IPR011006 CheY-like superfamily CFF04554_RS04040 IPR035909 Methylesterase CheB, C-terminal CFF04554_RS04040 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CFF04554_RS04050 IPR036267 RuvA, C-terminal domain superfamily CFF04554_RS04050 IPR010994 RuvA domain 2-like CFF04554_RS04050 IPR000085 Bacterial DNA recombination protein RuvA CFF04554_RS04050 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS04050 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CFF04554_RS04050 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CFF04554_RS04050 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CFF04554_RS04055 IPR011761 ATP-grasp fold CFF04554_RS04055 IPR013815 ATP-grasp fold, subdomain 1 CFF04554_RS04055 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CFF04554_RS04055 IPR005905 D-alanine--D-alanine ligase CFF04554_RS04055 IPR011095 D-alanine--D-alanine ligase, C-terminal CFF04554_RS04055 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CFF04554_RS04055 IPR016185 Pre-ATP-grasp domain superfamily CFF04554_RS04070 IPR004101 Mur ligase, C-terminal CFF04554_RS04070 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CFF04554_RS04070 IPR035911 MurE/MurF, N-terminal CFF04554_RS04070 IPR013221 Mur ligase, central CFF04554_RS04070 IPR036615 Mur ligase, C-terminal domain superfamily CFF04554_RS04070 IPR036565 Mur-like, catalytic domain superfamily CFF04554_RS04075 IPR023865 Aliphatic acid kinase, short-chain, conserved site CFF04554_RS04075 IPR004372 Acetate/propionate kinase CFF04554_RS04075 IPR000890 Aliphatic acid kinase, short-chain CFF04554_RS04080 IPR004614 Phosphate acetyltransferase CFF04554_RS04080 IPR042113 Phosphate acetyltransferase, domain 1 CFF04554_RS04080 IPR042112 Phosphate acetyltransferase, domain 2 CFF04554_RS04080 IPR002505 Phosphate acetyl/butaryl transferase CFF04554_RS04085 IPR000527 Flagellar L-ring protein CFF04554_RS04095 IPR029035 DHS-like NAD/FAD-binding domain superfamily CFF04554_RS04095 IPR012846 Acetolactate synthase, large subunit, biosynthetic CFF04554_RS04095 IPR039368 Acetolactate synthase large subunit, TPP binding domain CFF04554_RS04095 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS04095 IPR012000 Thiamine pyrophosphate enzyme, central domain CFF04554_RS04095 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CFF04554_RS04095 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CFF04554_RS04100 IPR004789 Acetolactate synthase, small subunit CFF04554_RS04100 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CFF04554_RS04100 IPR019455 Acetolactate synthase, small subunit, C-terminal CFF04554_RS04100 IPR002912 ACT domain CFF04554_RS04100 IPR039557 AHAS, ACT domain CFF04554_RS04105 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CFF04554_RS04105 IPR011004 Trimeric LpxA-like superfamily CFF04554_RS04105 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD CFF04554_RS04105 IPR001451 Hexapeptide repeat CFF04554_RS04115 IPR032816 SNARE associated Golgi protein CFF04554_RS04120 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CFF04554_RS04120 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CFF04554_RS04120 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CFF04554_RS04120 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CFF04554_RS04120 IPR004393 Nicotinate-nucleotide pyrophosphorylase CFF04554_RS04120 IPR013785 Aldolase-type TIM barrel CFF04554_RS04120 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily CFF04554_RS04125 IPR002912 ACT domain CFF04554_RS04125 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain CFF04554_RS04125 IPR002376 Formyl transferase, N-terminal CFF04554_RS04125 IPR036477 Formyl transferase, N-terminal domain superfamily CFF04554_RS04125 IPR004810 Formyltetrahydrofolate deformylase CFF04554_RS04130 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFF04554_RS04130 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CFF04554_RS04130 IPR001537 tRNA/rRNA methyltransferase, SpoU type CFF04554_RS04130 IPR029028 Alpha/beta knot methyltransferases CFF04554_RS04145 IPR006194 Glycine-tRNA synthetase, heterodimeric CFF04554_RS04145 IPR015944 Glycine-tRNA ligase, beta subunit CFF04554_RS04150 IPR012186 Adenine modification methylase, M.StsI-type CFF04554_RS04150 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CFF04554_RS04150 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04150 IPR012327 D12 class N6 adenine-specific DNA methyltransferase CFF04554_RS04150 IPR023095 Adenine-specific methyltransferase, domain 2 CFF04554_RS04165 IPR001463 Sodium:alanine symporter CFF04554_RS04170 IPR018303 P-type ATPase, phosphorylation site CFF04554_RS04170 IPR023298 P-type ATPase, transmembrane domain superfamily CFF04554_RS04170 IPR001757 P-type ATPase CFF04554_RS04170 IPR023299 P-type ATPase, cytoplasmic domain N CFF04554_RS04170 IPR027256 P-type ATPase, subfamily IB CFF04554_RS04170 IPR036163 Heavy metal-associated domain superfamily CFF04554_RS04170 IPR006121 Heavy metal-associated domain, HMA CFF04554_RS04170 IPR008250 P-type ATPase, A domain superfamily CFF04554_RS04170 IPR036412 HAD-like superfamily CFF04554_RS04170 IPR023214 HAD superfamily CFF04554_RS04170 IPR017969 Heavy-metal-associated, conserved site CFF04554_RS04205 IPR016047 Peptidase M23 CFF04554_RS04205 IPR013731 Opacity-associated protein A, N-terminal CFF04554_RS04205 IPR011055 Duplicated hybrid motif CFF04554_RS04205 IPR018392 LysM domain CFF04554_RS04215 IPR001867 OmpR/PhoB-type DNA-binding domain CFF04554_RS04215 IPR039420 Transcriptional regulatory protein WalR-like CFF04554_RS04215 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS04215 IPR011006 CheY-like superfamily CFF04554_RS04215 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS04220 IPR005467 Histidine kinase domain CFF04554_RS04220 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFF04554_RS04220 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFF04554_RS04220 IPR003594 Histidine kinase/HSP90-like ATPase CFF04554_RS04220 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFF04554_RS04225 IPR023434 Argininosuccinate synthase, type 1 subfamily CFF04554_RS04225 IPR018223 Argininosuccinate synthase, conserved site CFF04554_RS04225 IPR001518 Argininosuccinate synthase CFF04554_RS04225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS04225 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CFF04554_RS04230 IPR011010 DNA breaking-rejoining enzyme, catalytic core CFF04554_RS04230 IPR013762 Integrase-like, catalytic domain superfamily CFF04554_RS04230 IPR002104 Integrase, catalytic domain CFF04554_RS04230 IPR041308 Xer recombinase, N-terminal CFF04554_RS04230 IPR033683 Tyrosine recombinase XerH CFF04554_RS04235 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CFF04554_RS04235 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CFF04554_RS04240 IPR004276 Glycosyltransferase family 28, N-terminal domain CFF04554_RS04240 IPR007235 Glycosyl transferase, family 28, C-terminal CFF04554_RS04240 IPR006009 N-acetylglucosaminyltransferase, MurG CFF04554_RS04245 IPR000119 Histone-like DNA-binding protein CFF04554_RS04245 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CFF04554_RS04250 IPR002898 MotA/TolQ/ExbB proton channel CFF04554_RS04250 IPR014172 TonB-system energizer ExbB type-2 CFF04554_RS04255 IPR014171 TonB system transport protein ExbD type-2 CFF04554_RS04255 IPR003400 Biopolymer transport protein ExbD/TolR CFF04554_RS04265 IPR036986 RNA-binding S4 domain superfamily CFF04554_RS04265 IPR002942 RNA-binding S4 domain CFF04554_RS04265 IPR025490 RNA-binding protein, HP1423 type CFF04554_RS04270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04270 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CFF04554_RS04275 IPR003439 ABC transporter-like CFF04554_RS04275 IPR017871 ABC transporter, conserved site CFF04554_RS04275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04275 IPR030921 LPS export ABC transporter, ATP-binding protein LptB CFF04554_RS04275 IPR003593 AAA+ ATPase domain CFF04554_RS04280 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily CFF04554_RS04280 IPR000394 RNA polymerase sigma factor 54 CFF04554_RS04280 IPR007046 RNA polymerase sigma factor 54, core-binding domain CFF04554_RS04280 IPR007634 RNA polymerase sigma factor 54, DNA-binding CFF04554_RS04285 IPR016037 3-dehydroquinate synthase AroB CFF04554_RS04285 IPR030963 3-dehydroquinate synthase family CFF04554_RS04285 IPR030960 3-dehydroquinate synthase domain CFF04554_RS04295 IPR006467 MiaB-like tRNA modifying enzyme CFF04554_RS04295 IPR038135 Methylthiotransferase, N-terminal domain superfamily CFF04554_RS04295 IPR013848 Methylthiotransferase, N-terminal CFF04554_RS04295 IPR020612 Methylthiotransferase, conserved site CFF04554_RS04295 IPR006638 Elp3/MiaB/NifB CFF04554_RS04295 IPR007197 Radical SAM CFF04554_RS04295 IPR005839 Methylthiotransferase CFF04554_RS04295 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS04300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04300 IPR011546 Peptidase M41, FtsH extracellular CFF04554_RS04300 IPR005936 Peptidase, FtsH CFF04554_RS04300 IPR003593 AAA+ ATPase domain CFF04554_RS04300 IPR003960 ATPase, AAA-type, conserved site CFF04554_RS04300 IPR041569 AAA ATPase, AAA+ lid domain CFF04554_RS04300 IPR037219 Peptidase M41-like CFF04554_RS04300 IPR003959 ATPase, AAA-type, core CFF04554_RS04300 IPR000642 Peptidase M41 CFF04554_RS04305 IPR001453 MoaB/Mog domain CFF04554_RS04305 IPR036425 MoaB/Mog-like domain superfamily CFF04554_RS04305 IPR008284 Molybdenum cofactor biosynthesis, conserved site CFF04554_RS04310 IPR001608 Alanine racemase, N-terminal CFF04554_RS04310 IPR011078 Pyridoxal phosphate homeostasis protein CFF04554_RS04310 IPR029066 PLP-binding barrel CFF04554_RS04315 IPR036034 PDZ superfamily CFF04554_RS04315 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CFF04554_RS04315 IPR041489 PDZ domain 6 CFF04554_RS04315 IPR008915 Peptidase M50 CFF04554_RS04315 IPR001478 PDZ domain CFF04554_RS04320 IPR013785 Aldolase-type TIM barrel CFF04554_RS04320 IPR011060 Ribulose-phosphate binding barrel CFF04554_RS04320 IPR000056 Ribulose-phosphate 3-epimerase-like CFF04554_RS04320 IPR026019 Ribulose-phosphate 3-epimerase CFF04554_RS04330 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CFF04554_RS04330 IPR001650 Helicase, C-terminal CFF04554_RS04330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04330 IPR005259 Primosomal protein N' CFF04554_RS04330 IPR041222 Primosomal protein N', 3' DNA-binding domain CFF04554_RS04330 IPR041236 Primosomal protein N, C-terminal domain CFF04554_RS04330 IPR011545 DEAD/DEAH box helicase domain CFF04554_RS04330 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFF04554_RS04335 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS04335 IPR001082 Fimbrial protein pilin CFF04554_RS04340 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS04340 IPR000983 Bacterial general secretion pathway protein G-type pilin CFF04554_RS04340 IPR010054 General secretion pathway protein G CFF04554_RS04340 IPR013545 Type II secretion system protein G CFF04554_RS04345 IPR000983 Bacterial general secretion pathway protein G-type pilin CFF04554_RS04345 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS04345 IPR013545 Type II secretion system protein G CFF04554_RS04345 IPR010054 General secretion pathway protein G CFF04554_RS04365 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFF04554_RS04365 IPR001650 Helicase, C-terminal CFF04554_RS04365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04365 IPR001943 UVR domain CFF04554_RS04365 IPR036876 UVR domain superfamily CFF04554_RS04365 IPR041471 UvrB, interaction domain CFF04554_RS04365 IPR024759 UvrB, YAD/RRR-motif-containing domain CFF04554_RS04365 IPR004807 UvrABC system, subunit B CFF04554_RS04365 IPR006935 Helicase/UvrB, N-terminal CFF04554_RS04375 IPR039423 TonB-dependent receptor-like CFF04554_RS04375 IPR000531 TonB-dependent receptor-like, beta-barrel CFF04554_RS04375 IPR010917 TonB-dependent receptor, conserved site CFF04554_RS04375 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFF04554_RS04375 IPR010916 TonB box, conserved site CFF04554_RS04375 IPR010105 TonB-dependent siderophore receptor CFF04554_RS04375 IPR037066 TonB-dependent receptor, plug domain superfamily CFF04554_RS04375 IPR012910 TonB-dependent receptor, plug domain CFF04554_RS04385 IPR003414 Polyphosphate kinase CFF04554_RS04385 IPR041108 Polyphosphate kinase, C-terminal domain 1 CFF04554_RS04385 IPR024953 Polyphosphate kinase middle domain CFF04554_RS04385 IPR036832 Polyphosphate kinase N-terminal domain superfamily CFF04554_RS04385 IPR036830 Polyphosphate kinase middle domain superfamily CFF04554_RS04385 IPR025200 Polyphosphate kinase C-terminal domain 2 CFF04554_RS04385 IPR025198 Polyphosphate kinase N-terminal domain CFF04554_RS04395 IPR038071 UROD/MetE-like superfamily CFF04554_RS04395 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CFF04554_RS04395 IPR006276 Cobalamin-independent methionine synthase CFF04554_RS04395 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CFF04554_RS04410 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CFF04554_RS04410 IPR005952 Phosphoglycerate mutase 1 CFF04554_RS04410 IPR029033 Histidine phosphatase superfamily CFF04554_RS04410 IPR013078 Histidine phosphatase superfamily, clade-1 CFF04554_RS04415 IPR007402 Protein of unknown function DUF455 CFF04554_RS04415 IPR011197 Uncharacterised conserved protein UCP012318 CFF04554_RS04415 IPR009078 Ferritin-like superfamily CFF04554_RS04425 IPR022822 Lactate utilization protein A CFF04554_RS04425 IPR004017 Cysteine-rich domain CFF04554_RS04430 IPR037171 NagB/RpiA transferase-like CFF04554_RS04430 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CFF04554_RS04430 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS04430 IPR003741 LUD domain CFF04554_RS04430 IPR009051 Alpha-helical ferredoxin CFF04554_RS04430 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS04430 IPR024569 4Fe-4S binding protein, C-terminal CFF04554_RS04430 IPR004452 4Fe-4S binding protein CFF04554_RS04435 IPR003741 LUD domain CFF04554_RS04435 IPR022823 Lactate utilization protein C CFF04554_RS04435 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CFF04554_RS04435 IPR037171 NagB/RpiA transferase-like CFF04554_RS04445 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CFF04554_RS04445 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CFF04554_RS04445 IPR036968 Enolpyruvate transferase domain superfamily CFF04554_RS04445 IPR001986 Enolpyruvate transferase domain CFF04554_RS04450 IPR001453 MoaB/Mog domain CFF04554_RS04450 IPR008284 Molybdenum cofactor biosynthesis, conserved site CFF04554_RS04450 IPR038987 Molybdopterin biosynthesis protein MoeA-like CFF04554_RS04450 IPR005111 MoeA, C-terminal, domain IV CFF04554_RS04450 IPR036688 MoeA, C-terminal, domain IV superfamily CFF04554_RS04450 IPR005110 MoeA, N-terminal and linker domain CFF04554_RS04450 IPR036135 MoeA, N-terminal and linker domain superfamily CFF04554_RS04450 IPR036425 MoaB/Mog-like domain superfamily CFF04554_RS04465 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS04465 IPR001980 Phosphopantetheine adenylyltransferase CFF04554_RS04465 IPR004821 Cytidyltransferase-like domain CFF04554_RS04470 IPR018094 Thymidylate kinase CFF04554_RS04470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04470 IPR039430 Thymidylate kinase-like domain CFF04554_RS04475 IPR006195 Aminoacyl-tRNA synthetase, class II CFF04554_RS04475 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CFF04554_RS04475 IPR015807 Histidine-tRNA ligase CFF04554_RS04475 IPR004154 Anticodon-binding CFF04554_RS04475 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CFF04554_RS04475 IPR036621 Anticodon-binding domain superfamily CFF04554_RS04480 IPR029066 PLP-binding barrel CFF04554_RS04480 IPR000183 Ornithine/DAP/Arg decarboxylase CFF04554_RS04480 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CFF04554_RS04480 IPR002985 Arginine decarboxylase CFF04554_RS04480 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CFF04554_RS04480 IPR040634 Arginine decarboxylase, helical bundle domain CFF04554_RS04480 IPR041128 Arginine decarboxylase, C-terminal helical CFF04554_RS04480 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CFF04554_RS04485 IPR018357 Hexapeptide transferase, conserved site CFF04554_RS04485 IPR010493 Serine acetyltransferase, N-terminal CFF04554_RS04485 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CFF04554_RS04485 IPR005881 Serine O-acetyltransferase CFF04554_RS04485 IPR001451 Hexapeptide repeat CFF04554_RS04485 IPR011004 Trimeric LpxA-like superfamily CFF04554_RS04490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS04490 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS04490 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CFF04554_RS04490 IPR004839 Aminotransferase, class I/classII CFF04554_RS04490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS04495 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS04495 IPR002495 Glycosyl transferase, family 8 CFF04554_RS04495 IPR001173 Glycosyltransferase 2-like CFF04554_RS04505 IPR029039 Flavoprotein-like superfamily CFF04554_RS04505 IPR001226 Flavodoxin, conserved site CFF04554_RS04505 IPR008254 Flavodoxin/nitric oxide synthase CFF04554_RS04505 IPR010086 Flavodoxin, long chain CFF04554_RS04535 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CFF04554_RS04535 IPR012000 Thiamine pyrophosphate enzyme, central domain CFF04554_RS04535 IPR029035 DHS-like NAD/FAD-binding domain superfamily CFF04554_RS04535 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase CFF04554_RS04535 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes CFF04554_RS04535 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CFF04554_RS04535 IPR000399 TPP-binding enzyme, conserved site CFF04554_RS04535 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS04540 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS04540 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CFF04554_RS04540 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CFF04554_RS04540 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit CFF04554_RS04540 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CFF04554_RS04540 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CFF04554_RS04540 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CFF04554_RS04550 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CFF04554_RS04550 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CFF04554_RS04550 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CFF04554_RS04550 IPR003781 CoA-binding CFF04554_RS04550 IPR005810 Succinyl-CoA ligase, alpha subunit CFF04554_RS04550 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS04550 IPR016102 Succinyl-CoA synthetase-like CFF04554_RS04555 IPR011761 ATP-grasp fold CFF04554_RS04555 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CFF04554_RS04555 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CFF04554_RS04555 IPR005809 Succinate--CoA synthetase, beta subunit CFF04554_RS04555 IPR013815 ATP-grasp fold, subdomain 1 CFF04554_RS04555 IPR016102 Succinyl-CoA synthetase-like CFF04554_RS04555 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CFF04554_RS04560 IPR001236 Lactate/malate dehydrogenase, N-terminal CFF04554_RS04560 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS04560 IPR001557 L-lactate/malate dehydrogenase CFF04554_RS04560 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CFF04554_RS04560 IPR011275 Malate dehydrogenase, type 3 CFF04554_RS04560 IPR022383 Lactate/malate dehydrogenase, C-terminal CFF04554_RS04565 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric CFF04554_RS04585 IPR016160 Aldehyde dehydrogenase, cysteine active site CFF04554_RS04585 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFF04554_RS04585 IPR016162 Aldehyde dehydrogenase, N-terminal CFF04554_RS04585 IPR015590 Aldehyde dehydrogenase domain CFF04554_RS04585 IPR010102 Succinate semialdehyde dehydrogenase CFF04554_RS04585 IPR016161 Aldehyde/histidinol dehydrogenase CFF04554_RS04585 IPR016163 Aldehyde dehydrogenase, C-terminal CFF04554_RS04590 IPR016100 Prismane, alpha-bundle CFF04554_RS04590 IPR011254 Prismane-like superfamily CFF04554_RS04590 IPR016099 Prismane-like, alpha/beta-sandwich CFF04554_RS04590 IPR010048 Hydroxylamine reductase CFF04554_RS04590 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase CFF04554_RS04595 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS04595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS04595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS04595 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase CFF04554_RS04595 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CFF04554_RS04600 IPR030489 Transcription regulator Rrf2-type, conserved site CFF04554_RS04600 IPR000944 Transcription regulator Rrf2-type CFF04554_RS04600 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS04600 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS04605 IPR005859 Cysteine synthase CysK CFF04554_RS04605 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS04605 IPR005856 Cysteine synthase CFF04554_RS04605 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CFF04554_RS04605 IPR001926 Pyridoxal-phosphate dependent enzyme CFF04554_RS04610 IPR008278 4'-phosphopantetheinyl transferase domain CFF04554_RS04610 IPR002582 Holo-[acyl carrier protein] synthase CFF04554_RS04610 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CFF04554_RS04610 IPR004568 Phosphopantetheine-protein transferase domain CFF04554_RS04615 IPR005503 Flagellar basal body-associated protein FliL CFF04554_RS04620 IPR011234 Fumarylacetoacetase-like, C-terminal CFF04554_RS04620 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CFF04554_RS04625 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS04625 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS04625 IPR004636 Acetylornithine/Succinylornithine transaminase family CFF04554_RS04625 IPR005814 Aminotransferase class-III CFF04554_RS04625 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS04630 IPR005115 Uncharacterised domain UPF0126 CFF04554_RS04645 IPR000688 Hydrogenase maturation factor HypA/HybF CFF04554_RS04645 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CFF04554_RS04650 IPR011854 Carbamoyl dehydratase HypE CFF04554_RS04650 IPR010918 PurM-like, C-terminal domain CFF04554_RS04650 IPR036676 PurM-like, C-terminal domain superfamily CFF04554_RS04650 IPR016188 PurM-like, N-terminal domain CFF04554_RS04650 IPR036921 PurM-like, N-terminal domain superfamily CFF04554_RS04655 IPR042243 HypD, domain 2 CFF04554_RS04655 IPR042244 HypD, domain 1 CFF04554_RS04655 IPR002780 Hydrogenase formation HypD protein CFF04554_RS04660 IPR019812 Hydrogenase assembly chaperone, conserved site CFF04554_RS04660 IPR037254 HupF/HypC superfamily CFF04554_RS04660 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CFF04554_RS04665 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CFF04554_RS04665 IPR004392 Hydrogenase maturation factor HypB CFF04554_RS04665 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04670 IPR002145 Ribbon-helix-helix protein, CopG CFF04554_RS04670 IPR022988 Nickel-responsive transcriptional regulator NikR CFF04554_RS04670 IPR014864 Transcription factor, NikR, nickel binding C-terminal CFF04554_RS04670 IPR013321 Arc-type ribbon-helix-helix CFF04554_RS04670 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CFF04554_RS04670 IPR010985 Ribbon-helix-helix CFF04554_RS04675 IPR036046 Acylphosphatase-like domain superfamily CFF04554_RS04675 IPR001792 Acylphosphatase-like domain CFF04554_RS04675 IPR011125 Zinc finger, HypF-type CFF04554_RS04675 IPR017968 Acylphosphatase, conserved site CFF04554_RS04675 IPR006070 YrdC-like domain CFF04554_RS04675 IPR004421 Carbamoyltransferase, HypF-type CFF04554_RS04675 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CFF04554_RS04675 IPR041440 HypF, Kae1-like domain CFF04554_RS04685 IPR000671 Peptidase A31 family CFF04554_RS04685 IPR023430 Peptidase HybD-like domain superfamily CFF04554_RS04690 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CFF04554_RS04690 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit CFF04554_RS04690 IPR016174 Di-haem cytochrome, transmembrane CFF04554_RS04695 IPR029014 [NiFe]-hydrogenase, large subunit CFF04554_RS04695 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site CFF04554_RS04695 IPR001501 Nickel-dependent hydrogenase, large subunit CFF04554_RS04700 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CFF04554_RS04700 IPR006311 Twin-arginine translocation pathway, signal sequence CFF04554_RS04700 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily CFF04554_RS04700 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily CFF04554_RS04700 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CFF04554_RS04700 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CFF04554_RS04700 IPR001821 [NiFe]-hydrogenase, small subunit CFF04554_RS04710 IPR004471 Branched-chain amino acid transport, AzlC CFF04554_RS04710 IPR011606 Branched-chain amino acid transport, permease CFF04554_RS04715 IPR003959 ATPase, AAA-type, core CFF04554_RS04715 IPR036628 Clp, N-terminal domain superfamily CFF04554_RS04715 IPR003593 AAA+ ATPase domain CFF04554_RS04715 IPR019489 Clp ATPase, C-terminal CFF04554_RS04715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04715 IPR028299 ClpA/B, conserved site 2 CFF04554_RS04715 IPR018368 ClpA/B, conserved site 1 CFF04554_RS04715 IPR001270 ClpA/B family CFF04554_RS04715 IPR004176 Clp, N-terminal CFF04554_RS04715 IPR041546 ClpA/ClpB, AAA lid domain CFF04554_RS04720 IPR005151 Tail specific protease CFF04554_RS04720 IPR029045 ClpP/crotonase-like domain superfamily CFF04554_RS04720 IPR001478 PDZ domain CFF04554_RS04720 IPR004447 C-terminal-processing peptidase S41A CFF04554_RS04720 IPR036034 PDZ superfamily CFF04554_RS04725 IPR018236 SAICAR synthetase, conserved site CFF04554_RS04725 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase CFF04554_RS04725 IPR028923 SAICAR synthetase/ADE2, N-terminal CFF04554_RS04725 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CFF04554_RS04730 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily CFF04554_RS04730 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS CFF04554_RS04735 IPR017926 Glutamine amidotransferase CFF04554_RS04735 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ CFF04554_RS04735 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS04745 IPR002123 Phospholipid/glycerol acyltransferase CFF04554_RS04745 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CFF04554_RS04750 IPR003691 Putative fluoride ion transporter CrcB CFF04554_RS04760 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS04760 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CFF04554_RS04760 IPR003539 Cytolethal distending toxin B CFF04554_RS04775 IPR003539 Cytolethal distending toxin B CFF04554_RS04775 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CFF04554_RS04775 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS04780 IPR003558 Cytolethal distending toxin A/C CFF04554_RS04780 IPR015957 Cytolethal distending toxin A CFF04554_RS04780 IPR035992 Ricin B-like lectins CFF04554_RS04780 IPR000772 Ricin B, lectin domain CFF04554_RS04785 IPR019805 Heat shock protein Hsp90, conserved site CFF04554_RS04785 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFF04554_RS04785 IPR037196 HSP90, C-terminal domain CFF04554_RS04785 IPR001404 Heat shock protein Hsp90 family CFF04554_RS04785 IPR020575 Heat shock protein Hsp90, N-terminal CFF04554_RS04785 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS04785 IPR003594 Histidine kinase/HSP90-like ATPase CFF04554_RS04795 IPR041698 Methyltransferase domain 25 CFF04554_RS04795 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04800 IPR000212 DNA helicase, UvrD/REP type CFF04554_RS04800 IPR005751 ATP-dependent DNA helicase PcrA CFF04554_RS04800 IPR034739 UvrD/AddA helicase, N-terminal CFF04554_RS04800 IPR013986 DExx box DNA helicase domain superfamily CFF04554_RS04800 IPR014017 UvrD-like DNA helicase, C-terminal CFF04554_RS04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04800 IPR014016 UvrD-like helicase, ATP-binding domain CFF04554_RS04810 IPR005677 Fumarate hydratase, class II CFF04554_RS04810 IPR024083 Fumarase/histidase, N-terminal CFF04554_RS04810 IPR008948 L-Aspartase-like CFF04554_RS04810 IPR000362 Fumarate lyase family CFF04554_RS04810 IPR020557 Fumarate lyase, conserved site CFF04554_RS04810 IPR022761 Fumarate lyase, N-terminal CFF04554_RS04810 IPR018951 Fumarase C, C-terminal CFF04554_RS04815 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CFF04554_RS04815 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CFF04554_RS04815 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFF04554_RS04815 IPR002300 Aminoacyl-tRNA synthetase, class Ia CFF04554_RS04815 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CFF04554_RS04815 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CFF04554_RS04815 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFF04554_RS04815 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS04815 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CFF04554_RS04815 IPR002303 Valine-tRNA ligase CFF04554_RS04815 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CFF04554_RS04820 IPR026253 Methionine import ATP-binding protein MetN CFF04554_RS04820 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CFF04554_RS04820 IPR018449 NIL domain CFF04554_RS04820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04820 IPR003593 AAA+ ATPase domain CFF04554_RS04820 IPR003439 ABC transporter-like CFF04554_RS04820 IPR017871 ABC transporter, conserved site CFF04554_RS04825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFF04554_RS04825 IPR035906 MetI-like superfamily CFF04554_RS04830 IPR013785 Aldolase-type TIM barrel CFF04554_RS04830 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CFF04554_RS04830 IPR029056 Ribokinase-like CFF04554_RS04830 IPR036206 Thiamin phosphate synthase superfamily CFF04554_RS04830 IPR022998 Thiamine phosphate synthase/TenI CFF04554_RS04830 IPR034291 Thiamine phosphate synthase CFF04554_RS04830 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CFF04554_RS04835 IPR004872 Lipoprotein NlpA family CFF04554_RS04840 IPR001383 Ribosomal protein L28 CFF04554_RS04840 IPR037147 Ribosomal protein L28/L24 superfamily CFF04554_RS04840 IPR026569 Ribosomal protein L28/L24 CFF04554_RS04840 IPR034704 L28p-like CFF04554_RS04850 IPR002813 Arginine biosynthesis protein ArgJ CFF04554_RS04850 IPR016117 ArgJ-like domain superfamily CFF04554_RS04850 IPR042195 ArgJ beta chain, C-terminal domain CFF04554_RS04860 IPR000727 Target SNARE coiled-coil homology domain CFF04554_RS04860 IPR029151 Periplasmic sensor-like domain superfamily CFF04554_RS04860 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS04860 IPR003660 HAMP domain CFF04554_RS04860 IPR033479 Double Cache domain 1 CFF04554_RS04865 IPR010280 (Uracil-5)-methyltransferase family CFF04554_RS04865 IPR030390 RNA methyltransferase TrmA, active site CFF04554_RS04865 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS04865 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA CFF04554_RS04870 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS04870 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFF04554_RS04870 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS04885 IPR036511 Queuine tRNA-ribosyltransferase-like CFF04554_RS04885 IPR004803 tRNA-guanine transglycosylase CFF04554_RS04885 IPR002616 tRNA-guanine(15) transglycosylase-like CFF04554_RS04895 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04895 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CFF04554_RS04895 IPR007693 DNA helicase, DnaB-like, N-terminal CFF04554_RS04895 IPR007694 DNA helicase, DnaB-like, C-terminal CFF04554_RS04895 IPR007692 DNA helicase, DnaB type CFF04554_RS04895 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CFF04554_RS04900 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CFF04554_RS04900 IPR011005 Dihydropteroate synthase-like CFF04554_RS04900 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CFF04554_RS04925 IPR001486 Truncated hemoglobin CFF04554_RS04925 IPR012292 Globin/Protoglobin CFF04554_RS04925 IPR009050 Globin-like superfamily CFF04554_RS04940 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CFF04554_RS04940 IPR004406 Aconitase B CFF04554_RS04940 IPR015933 Aconitase B, HEAT-like domain CFF04554_RS04940 IPR015932 Aconitase, domain 2 CFF04554_RS04940 IPR015929 Aconitase B, swivel CFF04554_RS04940 IPR036288 Aconitase B, HEAT-like domain superfamily CFF04554_RS04940 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFF04554_RS04940 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CFF04554_RS04940 IPR018136 Aconitase family, 4Fe-4S cluster binding site CFF04554_RS04940 IPR036008 Aconitase, iron-sulfur domain CFF04554_RS04945 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CFF04554_RS04945 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CFF04554_RS04945 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CFF04554_RS04945 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS04945 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CFF04554_RS04945 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CFF04554_RS04945 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CFF04554_RS04950 IPR036144 RibA-like superfamily CFF04554_RS04950 IPR032677 GTP cyclohydrolase II CFF04554_RS04950 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CFF04554_RS04950 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CFF04554_RS04955 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CFF04554_RS04955 IPR020070 Ribosomal protein L9, N-terminal CFF04554_RS04955 IPR000244 Ribosomal protein L9 CFF04554_RS04955 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CFF04554_RS04955 IPR020594 Ribosomal protein L9, bacteria/chloroplast CFF04554_RS04955 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CFF04554_RS04955 IPR020069 Ribosomal protein L9, C-terminal CFF04554_RS04960 IPR023333 Proteasome B-type subunit CFF04554_RS04960 IPR001353 Proteasome, subunit alpha/beta CFF04554_RS04960 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS04960 IPR022281 ATP-dependent protease, HslV subunit CFF04554_RS04965 IPR003593 AAA+ ATPase domain CFF04554_RS04965 IPR003959 ATPase, AAA-type, core CFF04554_RS04965 IPR019489 Clp ATPase, C-terminal CFF04554_RS04965 IPR004491 Heat shock protein HslU CFF04554_RS04965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04970 IPR006073 GTP binding domain CFF04554_RS04970 IPR005662 GTP-binding protein Era CFF04554_RS04970 IPR030388 Era-type guanine nucleotide-binding (G) domain CFF04554_RS04970 IPR009019 K homology domain superfamily, prokaryotic type CFF04554_RS04970 IPR005225 Small GTP-binding protein domain CFF04554_RS04970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS04970 IPR015946 K homology domain-like, alpha/beta CFF04554_RS04970 IPR004044 K Homology domain, type 2 CFF04554_RS04995 IPR011662 Secretin/TonB, short N-terminal domain CFF04554_RS04995 IPR001775 GspD/PilQ family CFF04554_RS04995 IPR005644 NolW-like CFF04554_RS04995 IPR038591 NolW-like superfamily CFF04554_RS04995 IPR004846 Type II/III secretion system CFF04554_RS04995 IPR004845 Type II secretion system GspD, conserved site CFF04554_RS04995 IPR013355 Type IV pilus secretin PilQ CFF04554_RS04995 IPR021731 AMIN domain CFF04554_RS05010 IPR013369 Type II secretion system GspE CFF04554_RS05010 IPR037257 General secretory system II, protein E, N-terminal superfamily CFF04554_RS05010 IPR001482 Type II/IV secretion system protein CFF04554_RS05010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05010 IPR003593 AAA+ ATPase domain CFF04554_RS05015 IPR003004 GspF/PilC family CFF04554_RS05015 IPR042094 Type II secretion system F domain superfamily CFF04554_RS05015 IPR018076 Type II secretion system F domain CFF04554_RS05025 IPR035965 PAS domain superfamily CFF04554_RS05025 IPR001610 PAC motif CFF04554_RS05025 IPR000700 PAS-associated, C-terminal CFF04554_RS05025 IPR000014 PAS domain CFF04554_RS05025 IPR013655 PAS fold-3 CFF04554_RS05025 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS05025 IPR004090 Chemotaxis methyl-accepting receptor CFF04554_RS05035 IPR003695 Ppx/GppA phosphatase CFF04554_RS05035 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase CFF04554_RS05035 IPR030673 Pyrophosphatase, GppA/Ppx-type CFF04554_RS05040 IPR003607 HD/PDEase domain CFF04554_RS05040 IPR012006 tRNA nucleotidyltransferase, proteobacteria CFF04554_RS05040 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CFF04554_RS05040 IPR002646 Poly A polymerase, head domain CFF04554_RS05040 IPR006674 HD domain CFF04554_RS05055 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CFF04554_RS05055 IPR024084 Isopropylmalate dehydrogenase-like domain CFF04554_RS05055 IPR004429 Isopropylmalate dehydrogenase CFF04554_RS05060 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CFF04554_RS05060 IPR033940 3-isopropylmalate dehydratase, swivel domain CFF04554_RS05060 IPR011827 Hydrolyase LeuD/HacB/DmdB CFF04554_RS05060 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CFF04554_RS05080 IPR006034 Asparaginase/glutaminase-like CFF04554_RS05080 IPR020827 Asparaginase/glutaminase, active site 1 CFF04554_RS05080 IPR037152 L-asparaginase, N-terminal domain superfamily CFF04554_RS05080 IPR027474 L-asparaginase, N-terminal CFF04554_RS05080 IPR027473 L-asparaginase, C-terminal CFF04554_RS05080 IPR004550 L-asparaginase, type II CFF04554_RS05080 IPR040919 Asparaginase/glutaminase, C-terminal CFF04554_RS05080 IPR036152 Asparaginase/glutaminase-like superfamily CFF04554_RS05080 IPR027475 Asparaginase/glutaminase, active site 2 CFF04554_RS05085 IPR003798 DNA recombination RmuC CFF04554_RS05095 IPR013987 PhnA protein, N-terminal CFF04554_RS05095 IPR013988 PhnA protein, C-terminal CFF04554_RS05095 IPR004624 PhnA protein CFF04554_RS05100 IPR002318 Alanine-tRNA ligase, class IIc CFF04554_RS05100 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CFF04554_RS05100 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CFF04554_RS05100 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CFF04554_RS05100 IPR003156 DHHA1 domain CFF04554_RS05100 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CFF04554_RS05100 IPR009000 Translation protein, beta-barrel domain superfamily CFF04554_RS05100 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CFF04554_RS05100 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CFF04554_RS05110 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein CFF04554_RS05110 IPR029001 Inosine triphosphate pyrophosphatase-like CFF04554_RS05115 IPR001264 Glycosyl transferase, family 51 CFF04554_RS05115 IPR023346 Lysozyme-like domain superfamily CFF04554_RS05115 IPR036950 Penicillin binding protein transglycosylase domain CFF04554_RS05115 IPR031376 Penicillin-binding protein, OB-like domain CFF04554_RS05115 IPR001460 Penicillin-binding protein, transpeptidase CFF04554_RS05115 IPR012338 Beta-lactamase/transpeptidase-like CFF04554_RS05125 IPR038657 Ribosomal protein L19 superfamily CFF04554_RS05125 IPR001857 Ribosomal protein L19 CFF04554_RS05125 IPR018257 Ribosomal protein L19, conserved site CFF04554_RS05125 IPR008991 Translation protein SH3-like domain superfamily CFF04554_RS05130 IPR029028 Alpha/beta knot methyltransferases CFF04554_RS05130 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CFF04554_RS05130 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CFF04554_RS05130 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CFF04554_RS05130 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CFF04554_RS05135 IPR036976 RimM, N-terminal domain superfamily CFF04554_RS05135 IPR027275 PRC-barrel domain CFF04554_RS05135 IPR002676 RimM, N-terminal CFF04554_RS05135 IPR011961 16S rRNA processing protein RimM CFF04554_RS05135 IPR009000 Translation protein, beta-barrel domain superfamily CFF04554_RS05135 IPR011033 PRC-barrel-like superfamily CFF04554_RS05140 IPR015946 K homology domain-like, alpha/beta CFF04554_RS05140 IPR020627 Uncharacterised protein family UPF0109 CFF04554_RS05140 IPR009019 K homology domain superfamily, prokaryotic type CFF04554_RS05145 IPR023803 Ribosomal protein S16 domain superfamily CFF04554_RS05145 IPR020592 Ribosomal protein S16, conserved site CFF04554_RS05145 IPR000307 Ribosomal protein S16 CFF04554_RS05150 IPR004780 Signal recognition particle protein CFF04554_RS05150 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CFF04554_RS05150 IPR013822 Signal recognition particle SRP54, helical bundle CFF04554_RS05150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05150 IPR003593 AAA+ ATPase domain CFF04554_RS05150 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CFF04554_RS05150 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CFF04554_RS05150 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CFF04554_RS05150 IPR036225 SRP/SRP receptor, N-terminal CFF04554_RS05150 IPR022941 Signal recognition particle, SRP54 subunit CFF04554_RS05155 IPR031312 Sodium/sulphate symporter, conserved site CFF04554_RS05155 IPR001898 Solute carrier family 13 CFF04554_RS05160 IPR003660 HAMP domain CFF04554_RS05160 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS05160 IPR004090 Chemotaxis methyl-accepting receptor CFF04554_RS05165 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFF04554_RS05165 IPR006145 Pseudouridine synthase, RsuA/RluA CFF04554_RS05165 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CFF04554_RS05165 IPR002942 RNA-binding S4 domain CFF04554_RS05170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05170 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CFF04554_RS05170 IPR039901 3-deoxy-D-manno-octulosonic acid transferase CFF04554_RS05170 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily CFF04554_RS05170 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CFF04554_RS05180 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CFF04554_RS05180 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CFF04554_RS05185 IPR002310 Glycine-tRNA ligase, alpha subunit CFF04554_RS05185 IPR006194 Glycine-tRNA synthetase, heterodimeric CFF04554_RS05195 IPR024694 PurE, prokaryotic type CFF04554_RS05195 IPR035893 PurE domain superfamily CFF04554_RS05195 IPR000031 PurE domain CFF04554_RS05195 IPR033747 Class I PurE CFF04554_RS05200 IPR001539 Peptidase U32 CFF04554_RS05215 IPR004013 PHP domain CFF04554_RS05215 IPR010140 Histidinol phosphate phosphatase, HisJ CFF04554_RS05215 IPR016195 Polymerase/histidinol phosphatase-like CFF04554_RS05220 IPR027303 Glutamine synthetase, glycine-rich site CFF04554_RS05220 IPR008146 Glutamine synthetase, catalytic domain CFF04554_RS05220 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CFF04554_RS05220 IPR036651 Glutamine synthetase, N-terminal domain superfamily CFF04554_RS05220 IPR004809 Glutamine synthetase type I CFF04554_RS05220 IPR008147 Glutamine synthetase, beta-Grasp domain CFF04554_RS05230 IPR002110 Ankyrin repeat CFF04554_RS05230 IPR036770 Ankyrin repeat-containing domain superfamily CFF04554_RS05230 IPR020683 Ankyrin repeat-containing domain CFF04554_RS05235 IPR010582 Catalase immune-responsive domain CFF04554_RS05235 IPR018028 Catalase, mono-functional, haem-containing CFF04554_RS05235 IPR040333 Catalase, clade 3 CFF04554_RS05235 IPR002226 Catalase haem-binding site CFF04554_RS05235 IPR020835 Catalase superfamily CFF04554_RS05235 IPR037060 Catalase core domain superfamily CFF04554_RS05235 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CFF04554_RS05235 IPR011614 Catalase core domain CFF04554_RS05245 IPR008269 Peptidase S16, Lon proteolytic domain CFF04554_RS05245 IPR003111 Lon, substrate-binding domain CFF04554_RS05245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05245 IPR008268 Peptidase S16, active site CFF04554_RS05245 IPR015947 PUA-like superfamily CFF04554_RS05245 IPR027065 Lon protease CFF04554_RS05245 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS05245 IPR004815 Lon protease, bacterial/eukaryotic-type CFF04554_RS05245 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS05245 IPR027543 Lon protease, bacterial CFF04554_RS05245 IPR003959 ATPase, AAA-type, core CFF04554_RS05245 IPR003593 AAA+ ATPase domain CFF04554_RS05250 IPR011990 Tetratricopeptide-like helical domain superfamily CFF04554_RS05250 IPR039565 Outer membrane lipoprotein BamD-like CFF04554_RS05250 IPR017689 Outer membrane protein assembly factor BamD CFF04554_RS05255 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS05255 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS05255 IPR005471 Transcription regulator IclR, N-terminal CFF04554_RS05255 IPR029016 GAF-like domain superfamily CFF04554_RS05255 IPR014757 Transcription regulator IclR, C-terminal CFF04554_RS05265 IPR007392 D-galactarate/Altronate dehydratase, C-terminal CFF04554_RS05265 IPR013974 SAF domain CFF04554_RS05270 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS05270 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS05275 IPR020846 Major facilitator superfamily domain CFF04554_RS05275 IPR036259 MFS transporter superfamily CFF04554_RS05275 IPR005275 L-fucose permease FucP CFF04554_RS05275 IPR011701 Major facilitator superfamily CFF04554_RS05285 IPR003775 Flagellar assembly factor FliW CFF04554_RS05285 IPR024046 Flagellar assembly factor FliW domain superfamily CFF04554_RS05305 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily CFF04554_RS05305 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal CFF04554_RS05305 IPR003489 Ribosome hibernation promoting factor/RaiA CFF04554_RS05305 IPR036567 Ribosome hibernation promotion factor-like CFF04554_RS05305 IPR034694 Ribosome hibernation promoting factor, long/plastid CFF04554_RS05310 IPR001160 Peptidase M20C, Xaa-His dipeptidase CFF04554_RS05310 IPR011650 Peptidase M20, dimerisation domain CFF04554_RS05310 IPR002933 Peptidase M20 CFF04554_RS05315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05315 IPR027555 tRNA (mo5U34)-methyltransferase-like CFF04554_RS05315 IPR010017 tRNA U34 carboxymethyltransferase CFF04554_RS05320 IPR029069 HotDog domain superfamily CFF04554_RS05320 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal CFF04554_RS05320 IPR005251 Methylthioribose-1-phosphate isomerase CFF04554_RS05320 IPR011559 Initiation factor 2B alpha/beta/delta CFF04554_RS05320 IPR006683 Thioesterase domain CFF04554_RS05320 IPR037171 NagB/RpiA transferase-like CFF04554_RS05320 IPR000649 Initiation factor 2B-related CFF04554_RS05325 IPR001279 Metallo-beta-lactamase CFF04554_RS05325 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFF04554_RS05330 IPR022926 NH(3)-dependent NAD(+) synthetase CFF04554_RS05330 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS05330 IPR003694 NAD(+) synthetase CFF04554_RS05330 IPR022310 NAD/GMP synthase CFF04554_RS05335 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS05335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS05335 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS05335 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS05340 IPR003758 Tetraacyldisaccharide 4'-kinase CFF04554_RS05345 IPR001057 Glutamate/acetylglutamate kinase CFF04554_RS05345 IPR041727 N-Acetyl-L-glutamate kinase, cyclic CFF04554_RS05345 IPR036393 Acetylglutamate kinase-like superfamily CFF04554_RS05345 IPR004662 Acetylglutamate kinase family CFF04554_RS05345 IPR037528 Acetylglutamate kinase ArgB CFF04554_RS05345 IPR001048 Aspartate/glutamate/uridylate kinase CFF04554_RS05350 IPR037158 Threonine synthase, N-terminal domain superfamily CFF04554_RS05350 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CFF04554_RS05350 IPR001926 Pyridoxal-phosphate dependent enzyme CFF04554_RS05350 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CFF04554_RS05350 IPR004450 Threonine synthase-like CFF04554_RS05355 IPR003329 Acylneuraminate cytidylyltransferase CFF04554_RS05355 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CFF04554_RS05355 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS05365 IPR000160 GGDEF domain CFF04554_RS05365 IPR029787 Nucleotide cyclase CFF04554_RS05370 IPR011006 CheY-like superfamily CFF04554_RS05370 IPR000160 GGDEF domain CFF04554_RS05370 IPR029787 Nucleotide cyclase CFF04554_RS05370 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS05375 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CFF04554_RS05375 IPR035671 DsbD gamma CFF04554_RS05375 IPR013766 Thioredoxin domain CFF04554_RS05375 IPR003834 Cytochrome C biogenesis protein, transmembrane domain CFF04554_RS05375 IPR022910 Thiol:disulphide interchange protein DsbD CFF04554_RS05375 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily CFF04554_RS05375 IPR036249 Thioredoxin-like superfamily CFF04554_RS05380 IPR022486 Polyphosphate kinase 2, PA0141 CFF04554_RS05380 IPR022488 Polyphosphate kinase-2-related CFF04554_RS05380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05385 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CFF04554_RS05385 IPR018181 Heat shock protein 70, conserved site CFF04554_RS05385 IPR012725 Chaperone DnaK CFF04554_RS05385 IPR013126 Heat shock protein 70 family CFF04554_RS05385 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CFF04554_RS05390 IPR000740 GrpE nucleotide exchange factor CFF04554_RS05390 IPR013805 GrpE nucleotide exchange factor, coiled-coil CFF04554_RS05390 IPR009012 GrpE nucleotide exchange factor, head CFF04554_RS05395 IPR002571 Heat-inducible transcription repressor HrcA CFF04554_RS05395 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS05395 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS05420 IPR001712 Type III secretion system FHIPEP CFF04554_RS05420 IPR006301 Flagellar biosynthesis protein FlhA CFF04554_RS05420 IPR042196 FHIPEP, domain 4 CFF04554_RS05420 IPR042193 FHIPEP, domain 3 CFF04554_RS05420 IPR025505 FHIPEP conserved site CFF04554_RS05420 IPR042194 FHIPEP, domain 1 CFF04554_RS05425 IPR030489 Transcription regulator Rrf2-type, conserved site CFF04554_RS05425 IPR000944 Transcription regulator Rrf2-type CFF04554_RS05425 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS05425 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS05430 IPR000589 Ribosomal protein S15 CFF04554_RS05430 IPR009068 S15/NS1, RNA-binding CFF04554_RS05430 IPR005290 Ribosomal protein S15, bacterial-type CFF04554_RS05435 IPR015890 Chorismate-utilising enzyme, C-terminal CFF04554_RS05435 IPR019999 Anthranilate synthase component I-like CFF04554_RS05435 IPR005801 ADC synthase CFF04554_RS05440 IPR036038 Aminotransferase-like, PLP-dependent enzymes CFF04554_RS05440 IPR001544 Aminotransferase class IV CFF04554_RS05450 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CFF04554_RS05450 IPR003593 AAA+ ATPase domain CFF04554_RS05450 IPR003439 ABC transporter-like CFF04554_RS05450 IPR017871 ABC transporter, conserved site CFF04554_RS05450 IPR013611 Transport-associated OB, type 2 CFF04554_RS05450 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CFF04554_RS05450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05450 IPR008995 Molybdate/tungstate binding, C-terminal CFF04554_RS05695 IPR036733 B transposition protein, C-terminal domain superfamily CFF04554_RS05695 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05695 IPR009084 B transposition protein, C-terminal CFF04554_RS05695 IPR001387 Cro/C1-type helix-turn-helix domain CFF04554_RS05695 IPR003593 AAA+ ATPase domain CFF04554_RS05695 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CFF04554_RS05735 IPR025714 Methyltransferase domain CFF04554_RS05735 IPR005271 Carboxy-S-adenosyl-L-methionine synthase CFF04554_RS05735 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05740 IPR023465 Riboflavin kinase domain superfamily CFF04554_RS05740 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CFF04554_RS05740 IPR002606 Riboflavin kinase, bacterial CFF04554_RS05740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS05740 IPR023468 Riboflavin kinase CFF04554_RS05740 IPR015864 FAD synthetase CFF04554_RS05750 IPR018239 NAD-dependent DNA ligase, active site CFF04554_RS05750 IPR041663 DisA/LigA, helix-hairpin-helix motif CFF04554_RS05750 IPR013839 NAD-dependent DNA ligase, adenylation CFF04554_RS05750 IPR013840 NAD-dependent DNA ligase, N-terminal CFF04554_RS05750 IPR010994 RuvA domain 2-like CFF04554_RS05750 IPR001357 BRCT domain CFF04554_RS05750 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05750 IPR004150 NAD-dependent DNA ligase, OB-fold CFF04554_RS05750 IPR036420 BRCT domain superfamily CFF04554_RS05750 IPR001679 NAD-dependent DNA ligase CFF04554_RS05755 IPR016227 Dihydropteroate synthase, predicted CFF04554_RS05755 IPR006390 Dihydropteroate synthase CFF04554_RS05755 IPR000489 Pterin-binding domain CFF04554_RS05755 IPR011005 Dihydropteroate synthase-like CFF04554_RS05760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05760 IPR015199 DNA polymerase III, delta subunit, C-terminal CFF04554_RS05760 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CFF04554_RS05770 IPR001048 Aspartate/glutamate/uridylate kinase CFF04554_RS05770 IPR001341 Aspartate kinase CFF04554_RS05770 IPR041740 Aspartokinase catalytic domain CFF04554_RS05770 IPR002912 ACT domain CFF04554_RS05770 IPR018042 Aspartate kinase, conserved site CFF04554_RS05770 IPR005260 Aspartate kinase, monofunctional class CFF04554_RS05770 IPR036393 Acetylglutamate kinase-like superfamily CFF04554_RS05770 IPR027795 CASTOR, ACT domain CFF04554_RS05775 IPR020476 NUDIX hydrolase CFF04554_RS05775 IPR015797 NUDIX hydrolase-like domain superfamily CFF04554_RS05775 IPR020084 NUDIX hydrolase, conserved site CFF04554_RS05775 IPR000086 NUDIX hydrolase domain CFF04554_RS05775 IPR022927 RNA pyrophosphohydrolase RppH CFF04554_RS05780 IPR006638 Elp3/MiaB/NifB CFF04554_RS05780 IPR010723 HemN, C-terminal CFF04554_RS05780 IPR004559 Heme chaperone HemW-like CFF04554_RS05780 IPR007197 Radical SAM CFF04554_RS05780 IPR034505 Anaerobic coproporphyrinogen-III oxidase CFF04554_RS05780 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS05785 IPR018448 Twin-arginine translocation protein TatB CFF04554_RS05785 IPR003369 Sec-independent protein translocase protein TatA/B/E CFF04554_RS05790 IPR002033 Sec-independent periplasmic protein translocase TatC CFF04554_RS05790 IPR019820 Sec-independent periplasmic protein translocase, conserved site CFF04554_RS05795 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CFF04554_RS05795 IPR042119 QueA, domain 2 CFF04554_RS05795 IPR042118 QueA, domain 1 CFF04554_RS05795 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CFF04554_RS05805 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain CFF04554_RS05805 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CFF04554_RS05805 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal CFF04554_RS05805 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CFF04554_RS05805 IPR011023 Nop2p CFF04554_RS05805 IPR023267 RNA (C5-cytosine) methyltransferase CFF04554_RS05805 IPR023545 rRNA small subunit methyltransferase F CFF04554_RS05805 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS05810 IPR037027 YqgF/RNase H-like domain superfamily CFF04554_RS05810 IPR006641 YqgF/RNase H-like domain CFF04554_RS05810 IPR012337 Ribonuclease H-like superfamily CFF04554_RS05810 IPR005227 Putative pre-16S rRNA nuclease CFF04554_RS05820 IPR006837 Divergent polysaccharide deacetylase CFF04554_RS05820 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CFF04554_RS05825 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFF04554_RS05825 IPR000506 Ketol-acid reductoisomerase, C-terminal CFF04554_RS05825 IPR013023 Ketol-acid reductoisomerase CFF04554_RS05825 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS05825 IPR014359 Ketol-acid reductoisomerase, prokaryotic CFF04554_RS05825 IPR013116 Ketol-acid reductoisomerase, N-terminal CFF04554_RS05835 IPR022966 Ribonuclease II/R, conserved site CFF04554_RS05835 IPR001900 Ribonuclease II/R CFF04554_RS05835 IPR011805 Ribonuclease R CFF04554_RS05835 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05845 IPR000529 Ribosomal protein S6 CFF04554_RS05845 IPR020814 Ribosomal protein S6, plastid/chloroplast CFF04554_RS05845 IPR035980 Ribosomal protein S6 superfamily CFF04554_RS05845 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CFF04554_RS05850 IPR000424 Primosome PriB/single-strand DNA-binding CFF04554_RS05850 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05850 IPR011344 Single-stranded DNA-binding protein CFF04554_RS05855 IPR036870 Ribosomal protein S18 superfamily CFF04554_RS05855 IPR001648 Ribosomal protein S18 CFF04554_RS05860 IPR012724 Chaperone DnaJ CFF04554_RS05860 IPR002939 Chaperone DnaJ, C-terminal CFF04554_RS05860 IPR001623 DnaJ domain CFF04554_RS05860 IPR018253 DnaJ domain, conserved site CFF04554_RS05860 IPR008971 HSP40/DnaJ peptide-binding CFF04554_RS05860 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CFF04554_RS05860 IPR036869 Chaperone J-domain superfamily CFF04554_RS05860 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CFF04554_RS05865 IPR001867 OmpR/PhoB-type DNA-binding domain CFF04554_RS05865 IPR016032 Signal transduction response regulator, C-terminal effector CFF04554_RS05865 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS05865 IPR039420 Transcriptional regulatory protein WalR-like CFF04554_RS05865 IPR011006 CheY-like superfamily CFF04554_RS05865 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS05870 IPR003594 Histidine kinase/HSP90-like ATPase CFF04554_RS05870 IPR003660 HAMP domain CFF04554_RS05870 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFF04554_RS05870 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFF04554_RS05870 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFF04554_RS05870 IPR005467 Histidine kinase domain CFF04554_RS05875 IPR034137 RecR, TOPRIM domain CFF04554_RS05875 IPR006171 TOPRIM domain CFF04554_RS05875 IPR015967 Recombination protein RecR, conserved site CFF04554_RS05875 IPR023628 Recombination protein RecR, C4-type zinc finger CFF04554_RS05875 IPR023627 Recombination protein RecR CFF04554_RS05875 IPR000093 DNA recombination protein RecR CFF04554_RS05880 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS05880 IPR011342 Shikimate dehydrogenase CFF04554_RS05880 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CFF04554_RS05880 IPR022893 Shikimate dehydrogenase family CFF04554_RS05895 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS05895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS05895 IPR001085 Serine hydroxymethyltransferase CFF04554_RS05895 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS05895 IPR039429 Serine hydroxymethyltransferase-like domain CFF04554_RS05895 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CFF04554_RS05900 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CFF04554_RS05900 IPR006195 Aminoacyl-tRNA synthetase, class II CFF04554_RS05900 IPR002313 Lysine-tRNA ligase, class II CFF04554_RS05900 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CFF04554_RS05900 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS05900 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CFF04554_RS05905 IPR002481 Ferric-uptake regulator CFF04554_RS05905 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS05905 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS05915 IPR006321 Pilus retraction protein PilT CFF04554_RS05915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS05915 IPR001482 Type II/IV secretion system protein CFF04554_RS05915 IPR003593 AAA+ ATPase domain CFF04554_RS05920 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C CFF04554_RS05920 IPR003837 Glu-tRNAGln amidotransferase C subunit CFF04554_RS05930 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CFF04554_RS05930 IPR032737 Plasminogen-binding protein PgbA, C-terminal CFF04554_RS05930 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CFF04554_RS05940 IPR004619 Type III pantothenate kinase CFF04554_RS05945 IPR018198 ATP phosphoribosyltransferase, conserved site CFF04554_RS05945 IPR024893 ATP phosphoribosyltransferase HisG, short form CFF04554_RS05945 IPR001348 ATP phosphoribosyltransferase HisG CFF04554_RS05945 IPR013820 ATP phosphoribosyltransferase, catalytic domain CFF04554_RS05950 IPR004685 Branched-chain amino acid transport system II carrier protein CFF04554_RS05955 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CFF04554_RS05955 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS05960 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 CFF04554_RS05960 IPR037192 ERO1-like superfamily CFF04554_RS05960 IPR033177 Phosphatidylserine decarboxylase CFF04554_RS05960 IPR003817 Phosphatidylserine decarboxylase-related CFF04554_RS05980 IPR011031 Multihaem cytochrome CFF04554_RS05980 IPR036280 Multiheme cytochrome superfamily CFF04554_RS05980 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CFF04554_RS05985 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS05985 IPR011886 Ferredoxin-type protein, NapH/MauN family CFF04554_RS05985 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS05990 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS05990 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS05990 IPR004494 MauM/NapG ferredoxin-type protein CFF04554_RS05990 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CFF04554_RS05995 IPR010051 Periplasmic nitrate reductase, large subunit CFF04554_RS05995 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CFF04554_RS05995 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CFF04554_RS05995 IPR006311 Twin-arginine translocation pathway, signal sequence CFF04554_RS05995 IPR006657 Molybdopterin dinucleotide-binding domain CFF04554_RS05995 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain CFF04554_RS05995 IPR009010 Aspartate decarboxylase-like domain superfamily CFF04554_RS05995 IPR006656 Molybdopterin oxidoreductase CFF04554_RS06000 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFF04554_RS06000 IPR035906 MetI-like superfamily CFF04554_RS06000 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFF04554_RS06005 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFF04554_RS06005 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFF04554_RS06005 IPR035906 MetI-like superfamily CFF04554_RS06015 IPR003593 AAA+ ATPase domain CFF04554_RS06015 IPR003439 ABC transporter-like CFF04554_RS06015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06015 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CFF04554_RS06015 IPR017871 ABC transporter, conserved site CFF04554_RS06020 IPR012676 TGS-like CFF04554_RS06020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06020 IPR004095 TGS CFF04554_RS06020 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CFF04554_RS06020 IPR006073 GTP binding domain CFF04554_RS06020 IPR031167 OBG-type guanine nucleotide-binding (G) domain CFF04554_RS06020 IPR012675 Beta-grasp domain superfamily CFF04554_RS06020 IPR023192 TGS-like domain superfamily CFF04554_RS06020 IPR041706 YchF, N-terminal CFF04554_RS06020 IPR013029 YchF, C-terminal domain CFF04554_RS06025 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CFF04554_RS06025 IPR023042 Peptidase M17, leucine aminopeptidase CFF04554_RS06025 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CFF04554_RS06035 IPR029057 Phosphoribosyltransferase-like CFF04554_RS06035 IPR000836 Phosphoribosyltransferase domain CFF04554_RS06035 IPR005764 Adenine phosphoribosyl transferase CFF04554_RS06045 IPR004785 Ribose 5-phosphate isomerase B CFF04554_RS06045 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily CFF04554_RS06045 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CFF04554_RS06050 IPR008915 Peptidase M50 CFF04554_RS06055 IPR019758 Peptidase S26A, signal peptidase I, conserved site CFF04554_RS06055 IPR019533 Peptidase S26 CFF04554_RS06055 IPR036286 LexA/Signal peptidase-like superfamily CFF04554_RS06055 IPR000223 Peptidase S26A, signal peptidase I CFF04554_RS06060 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CFF04554_RS06060 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CFF04554_RS06060 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CFF04554_RS06060 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CFF04554_RS06060 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS06070 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CFF04554_RS06070 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS06070 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS06070 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS06070 IPR005814 Aminotransferase class-III CFF04554_RS06095 IPR006136 Flagellar biosynthetic protein FlhB CFF04554_RS06095 IPR006135 Type III secretion system substrate exporter CFF04554_RS06095 IPR029025 Type III secretion system substrate exporter, C-terminal CFF04554_RS06100 IPR001460 Penicillin-binding protein, transpeptidase CFF04554_RS06100 IPR012338 Beta-lactamase/transpeptidase-like CFF04554_RS06100 IPR017790 Penicillin-binding protein 2 CFF04554_RS06100 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CFF04554_RS06100 IPR005311 Penicillin-binding protein, dimerisation domain CFF04554_RS06115 IPR005225 Small GTP-binding protein domain CFF04554_RS06115 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CFF04554_RS06115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06115 IPR006073 GTP binding domain CFF04554_RS06115 IPR030393 EngB-type guanine nucleotide-binding (G) domain CFF04554_RS06135 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS06135 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CFF04554_RS06135 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily CFF04554_RS06135 IPR000807 Imidazoleglycerol-phosphate dehydratase CFF04554_RS06140 IPR007730 Sporulation-like domain CFF04554_RS06140 IPR036908 RlpA-like domain superfamily CFF04554_RS06140 IPR009009 RlpA-like protein, double-psi beta-barrel domain CFF04554_RS06140 IPR036680 Sporulation-like domain superfamily CFF04554_RS06140 IPR034718 Endolytic peptidoglycan transglycosylase RlpA CFF04554_RS06140 IPR012997 Rare lipoprotein A CFF04554_RS06145 IPR038765 Papain-like cysteine peptidase superfamily CFF04554_RS06145 IPR018392 LysM domain CFF04554_RS06145 IPR036779 LysM domain superfamily CFF04554_RS06145 IPR000064 Endopeptidase, NLPC/P60 domain CFF04554_RS06150 IPR015991 Uncharacterised hydrolase TatD-type CFF04554_RS06150 IPR001130 TatD family CFF04554_RS06150 IPR032466 Metal-dependent hydrolase CFF04554_RS06150 IPR018228 Deoxyribonuclease, TatD-related, conserved site CFF04554_RS06155 IPR011006 CheY-like superfamily CFF04554_RS06155 IPR029787 Nucleotide cyclase CFF04554_RS06155 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS06155 IPR000160 GGDEF domain CFF04554_RS06160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06160 IPR038729 Rad50/SbcC-type AAA domain CFF04554_RS06160 IPR004604 DNA recombination/repair protein RecN CFF04554_RS06165 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CFF04554_RS06165 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CFF04554_RS06165 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CFF04554_RS06165 IPR002504 NAD kinase CFF04554_RS06170 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06170 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CFF04554_RS06170 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CFF04554_RS06170 IPR004524 Aspartate-tRNA ligase, type 1 CFF04554_RS06170 IPR006195 Aminoacyl-tRNA synthetase, class II CFF04554_RS06170 IPR004115 GAD-like domain superfamily CFF04554_RS06170 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CFF04554_RS06170 IPR029351 GAD domain CFF04554_RS06175 IPR033690 Adenylate kinase, conserved site CFF04554_RS06175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06175 IPR000850 Adenylate kinase/UMP-CMP kinase CFF04554_RS06180 IPR036649 Inorganic pyrophosphatase superfamily CFF04554_RS06180 IPR008162 Inorganic pyrophosphatase CFF04554_RS06185 IPR005019 Methyladenine glycosylase CFF04554_RS06185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06185 IPR001674 GMP synthase, C-terminal CFF04554_RS06185 IPR025777 GMP synthetase ATP pyrophosphatase domain CFF04554_RS06185 IPR011257 DNA glycosylase CFF04554_RS06185 IPR017926 Glutamine amidotransferase CFF04554_RS06185 IPR000182 GNAT domain CFF04554_RS06185 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS06185 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS06195 IPR003593 AAA+ ATPase domain CFF04554_RS06195 IPR003439 ABC transporter-like CFF04554_RS06195 IPR017871 ABC transporter, conserved site CFF04554_RS06195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06205 IPR002491 ABC transporter periplasmic binding domain CFF04554_RS06230 IPR006076 FAD dependent oxidoreductase CFF04554_RS06230 IPR036188 FAD/NAD(P)-binding domain superfamily CFF04554_RS06230 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal CFF04554_RS06230 IPR008471 MnmC-like methyltransferase CFF04554_RS06230 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC CFF04554_RS06235 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CFF04554_RS06240 IPR013785 Aldolase-type TIM barrel CFF04554_RS06240 IPR005994 Guanosine monophosphate reductase, type2 CFF04554_RS06240 IPR001093 IMP dehydrogenase/GMP reductase CFF04554_RS06240 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CFF04554_RS06245 IPR002305 Aminoacyl-tRNA synthetase, class Ic CFF04554_RS06245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06245 IPR002942 RNA-binding S4 domain CFF04554_RS06245 IPR036986 RNA-binding S4 domain superfamily CFF04554_RS06245 IPR002307 Tyrosine-tRNA ligase CFF04554_RS06245 IPR024088 Tyrosine-tRNA ligase, bacterial-type CFF04554_RS06245 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CFF04554_RS06245 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFF04554_RS06250 IPR004095 TGS CFF04554_RS06250 IPR003607 HD/PDEase domain CFF04554_RS06250 IPR004811 RelA/SpoT family CFF04554_RS06250 IPR012675 Beta-grasp domain superfamily CFF04554_RS06250 IPR002912 ACT domain CFF04554_RS06250 IPR033655 RelA, TGS domain CFF04554_RS06250 IPR007685 RelA/SpoT CFF04554_RS06250 IPR012676 TGS-like CFF04554_RS06255 IPR003716 DNA-directed RNA polymerase, omega subunit CFF04554_RS06255 IPR006110 RNA polymerase, subunit omega/K/RPB6 CFF04554_RS06255 IPR012293 RNA polymerase subunit, RPB6/omega CFF04554_RS06255 IPR036161 RPB6/omega subunit-like superfamily CFF04554_RS06260 IPR015963 Uridylate kinase, bacteria CFF04554_RS06260 IPR011817 Uridylate kinase CFF04554_RS06260 IPR001048 Aspartate/glutamate/uridylate kinase CFF04554_RS06260 IPR036393 Acetylglutamate kinase-like superfamily CFF04554_RS06275 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CFF04554_RS06275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06275 IPR018449 NIL domain CFF04554_RS06275 IPR003593 AAA+ ATPase domain CFF04554_RS06275 IPR026253 Methionine import ATP-binding protein MetN CFF04554_RS06275 IPR003439 ABC transporter-like CFF04554_RS06275 IPR017871 ABC transporter, conserved site CFF04554_RS06275 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CFF04554_RS06280 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CFF04554_RS06280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS06290 IPR036986 RNA-binding S4 domain superfamily CFF04554_RS06290 IPR002942 RNA-binding S4 domain CFF04554_RS06290 IPR006145 Pseudouridine synthase, RsuA/RluA CFF04554_RS06290 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CFF04554_RS06290 IPR006225 Pseudouridine synthase, RluC/RluD CFF04554_RS06290 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFF04554_RS06295 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CFF04554_RS06295 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CFF04554_RS06295 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CFF04554_RS06300 IPR036249 Thioredoxin-like superfamily CFF04554_RS06300 IPR013766 Thioredoxin domain CFF04554_RS06300 IPR003782 Copper chaperone SCO1/SenC CFF04554_RS06310 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS06310 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS06310 IPR002577 Helix-turn-helix, HxlR type CFF04554_RS06315 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS06315 IPR016040 NAD(P)-binding domain CFF04554_RS06325 IPR004090 Chemotaxis methyl-accepting receptor CFF04554_RS06325 IPR001610 PAC motif CFF04554_RS06325 IPR000014 PAS domain CFF04554_RS06325 IPR000700 PAS-associated, C-terminal CFF04554_RS06325 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS06325 IPR035965 PAS domain superfamily CFF04554_RS06325 IPR013655 PAS fold-3 CFF04554_RS06335 IPR038377 Sodium/glucose symporter superfamily CFF04554_RS06335 IPR001734 Sodium/solute symporter CFF04554_RS06335 IPR011851 Sodium/proline symporter CFF04554_RS06340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFF04554_RS06340 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CFF04554_RS06340 IPR035906 MetI-like superfamily CFF04554_RS06345 IPR017871 ABC transporter, conserved site CFF04554_RS06345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06345 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CFF04554_RS06345 IPR003439 ABC transporter-like CFF04554_RS06345 IPR003593 AAA+ ATPase domain CFF04554_RS06350 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFF04554_RS06350 IPR018313 Solute-binding protein family 3, conserved site CFF04554_RS06355 IPR018313 Solute-binding protein family 3, conserved site CFF04554_RS06355 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CFF04554_RS06360 IPR013785 Aldolase-type TIM barrel CFF04554_RS06360 IPR034291 Thiamine phosphate synthase CFF04554_RS06360 IPR022998 Thiamine phosphate synthase/TenI CFF04554_RS06360 IPR036206 Thiamin phosphate synthase superfamily CFF04554_RS06365 IPR003824 Undecaprenyl-diphosphatase UppP CFF04554_RS06370 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS06370 IPR010970 Cysteine desulfurase, SufS CFF04554_RS06370 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS06370 IPR000192 Aminotransferase class V domain CFF04554_RS06370 IPR016454 Cysteine desulfurase CFF04554_RS06370 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS06380 IPR003594 Histidine kinase/HSP90-like ATPase CFF04554_RS06380 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFF04554_RS06380 IPR005467 Histidine kinase domain CFF04554_RS06380 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFF04554_RS06380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFF04554_RS06380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFF04554_RS06385 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CFF04554_RS06385 IPR004013 PHP domain CFF04554_RS06385 IPR004805 DNA polymerase III, alpha subunit CFF04554_RS06385 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CFF04554_RS06385 IPR016195 Polymerase/histidinol phosphatase-like CFF04554_RS06385 IPR040982 DNA polymerase III alpha subunit finger domain CFF04554_RS06385 IPR029460 DNA polymerase, helix-hairpin-helix motif CFF04554_RS06385 IPR003141 Polymerase/histidinol phosphatase, N-terminal CFF04554_RS06390 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CFF04554_RS06390 IPR035979 RNA-binding domain superfamily CFF04554_RS06390 IPR000504 RNA recognition motif domain CFF04554_RS06395 IPR013321 Arc-type ribbon-helix-helix CFF04554_RS06395 IPR016161 Aldehyde/histidinol dehydrogenase CFF04554_RS06395 IPR016163 Aldehyde dehydrogenase, C-terminal CFF04554_RS06395 IPR016160 Aldehyde dehydrogenase, cysteine active site CFF04554_RS06395 IPR010985 Ribbon-helix-helix CFF04554_RS06395 IPR002872 Proline dehydrogenase domain CFF04554_RS06395 IPR025703 Bifunctional protein PutA CFF04554_RS06395 IPR024089 Proline dehydrogenase PutA, domain I/II CFF04554_RS06395 IPR024090 Proline dehydrogenase PutA, domain I CFF04554_RS06395 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain CFF04554_RS06395 IPR024082 Proline dehydrogenase PutA, domain II CFF04554_RS06395 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CFF04554_RS06395 IPR015590 Aldehyde dehydrogenase domain CFF04554_RS06395 IPR016162 Aldehyde dehydrogenase, N-terminal CFF04554_RS06395 IPR029041 FAD-linked oxidoreductase-like CFF04554_RS06395 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CFF04554_RS06400 IPR001734 Sodium/solute symporter CFF04554_RS06400 IPR011851 Sodium/proline symporter CFF04554_RS06400 IPR038377 Sodium/glucose symporter superfamily CFF04554_RS06400 IPR018212 Sodium/solute symporter, conserved site CFF04554_RS06405 IPR024717 Denitrification system component NapC/NirT/NrfH CFF04554_RS06405 IPR011031 Multihaem cytochrome CFF04554_RS06405 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT CFF04554_RS06405 IPR038266 NapC/NirT cytochrome c superfamily CFF04554_RS06405 IPR036280 Multiheme cytochrome superfamily CFF04554_RS06405 IPR005126 NapC/NirT cytochrome c, N-terminal CFF04554_RS06410 IPR003321 Cytochrome c552 CFF04554_RS06410 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit CFF04554_RS06410 IPR011031 Multihaem cytochrome CFF04554_RS06410 IPR036280 Multiheme cytochrome superfamily CFF04554_RS06415 IPR006287 Protein/nucleic acid deglycase DJ-1 CFF04554_RS06415 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS06415 IPR002818 DJ-1/PfpI CFF04554_RS06420 IPR013185 Translation elongation factor, KOW-like CFF04554_RS06420 IPR001059 Translation elongation factor P/YeiP, central CFF04554_RS06420 IPR011768 Translation elongation factor P CFF04554_RS06420 IPR008991 Translation protein SH3-like domain superfamily CFF04554_RS06420 IPR015365 Elongation factor P, C-terminal CFF04554_RS06420 IPR014722 Ribosomal protein L2, domain 2 CFF04554_RS06420 IPR020599 Translation elongation factor P/YeiP CFF04554_RS06420 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06425 IPR002912 ACT domain CFF04554_RS06425 IPR006236 D-3-phosphoglycerate dehydrogenase CFF04554_RS06425 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS06425 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CFF04554_RS06425 IPR029009 Allosteric substrate binding domain superfamily CFF04554_RS06425 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFF04554_RS06425 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CFF04554_RS06425 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CFF04554_RS06435 IPR003029 S1 domain CFF04554_RS06435 IPR022967 RNA-binding domain, S1 CFF04554_RS06435 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06435 IPR000110 Ribosomal protein S1 CFF04554_RS06440 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CFF04554_RS06445 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CFF04554_RS06445 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CFF04554_RS06445 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CFF04554_RS06445 IPR036968 Enolpyruvate transferase domain superfamily CFF04554_RS06445 IPR001986 Enolpyruvate transferase domain CFF04554_RS06450 IPR005146 B3/B4 tRNA-binding domain CFF04554_RS06450 IPR009061 Putative DNA-binding domain superfamily CFF04554_RS06450 IPR005121 Ferrodoxin-fold anticodon-binding domain CFF04554_RS06450 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CFF04554_RS06450 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CFF04554_RS06450 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CFF04554_RS06450 IPR002547 tRNA-binding domain CFF04554_RS06450 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06450 IPR005147 tRNA synthetase, B5-domain CFF04554_RS06450 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CFF04554_RS06455 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CFF04554_RS06455 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CFF04554_RS06455 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CFF04554_RS06455 IPR002319 Phenylalanyl-tRNA synthetase CFF04554_RS06455 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CFF04554_RS06455 IPR006195 Aminoacyl-tRNA synthetase, class II CFF04554_RS06460 IPR011146 HIT-like domain CFF04554_RS06460 IPR019808 Histidine triad, conserved site CFF04554_RS06460 IPR036265 HIT-like superfamily CFF04554_RS06460 IPR001310 Histidine triad (HIT) protein CFF04554_RS06470 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06470 IPR036345 Exoribonuclease, PH domain 2 superfamily CFF04554_RS06470 IPR022967 RNA-binding domain, S1 CFF04554_RS06470 IPR001247 Exoribonuclease, phosphorolytic domain 1 CFF04554_RS06470 IPR004087 K Homology domain CFF04554_RS06470 IPR004088 K Homology domain, type 1 CFF04554_RS06470 IPR036612 K Homology domain, type 1 superfamily CFF04554_RS06470 IPR015847 Exoribonuclease, phosphorolytic domain 2 CFF04554_RS06470 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CFF04554_RS06470 IPR003029 S1 domain CFF04554_RS06470 IPR012162 Polyribonucleotide nucleotidyltransferase CFF04554_RS06470 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS06470 IPR027408 PNPase/RNase PH domain superfamily CFF04554_RS06490 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CFF04554_RS06490 IPR016185 Pre-ATP-grasp domain superfamily CFF04554_RS06490 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CFF04554_RS06490 IPR020559 Phosphoribosylglycinamide synthetase, conserved site CFF04554_RS06490 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CFF04554_RS06490 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CFF04554_RS06490 IPR000115 Phosphoribosylglycinamide synthetase CFF04554_RS06490 IPR011054 Rudiment single hybrid motif CFF04554_RS06490 IPR013815 ATP-grasp fold, subdomain 1 CFF04554_RS06490 IPR011761 ATP-grasp fold CFF04554_RS06505 IPR004739 GMP synthase, glutamine amidotransferase CFF04554_RS06505 IPR001674 GMP synthase, C-terminal CFF04554_RS06505 IPR017926 Glutamine amidotransferase CFF04554_RS06505 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS06505 IPR025777 GMP synthetase ATP pyrophosphatase domain CFF04554_RS06505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06505 IPR022310 NAD/GMP synthase CFF04554_RS06505 IPR022955 GMP synthase CFF04554_RS06515 IPR010994 RuvA domain 2-like CFF04554_RS06515 IPR035901 GIY-YIG endonuclease superfamily CFF04554_RS06515 IPR000305 GIY-YIG endonuclease CFF04554_RS06515 IPR036876 UVR domain superfamily CFF04554_RS06515 IPR004791 UvrABC system, subunit C CFF04554_RS06515 IPR001162 UvrC family homology region CFF04554_RS06515 IPR038476 UvrC homology region 2 superfamily CFF04554_RS06515 IPR001943 UVR domain CFF04554_RS06525 IPR011006 CheY-like superfamily CFF04554_RS06525 IPR003660 HAMP domain CFF04554_RS06525 IPR003594 Histidine kinase/HSP90-like ATPase CFF04554_RS06525 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS06525 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CFF04554_RS06525 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CFF04554_RS06525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CFF04554_RS06525 IPR036641 HPT domain superfamily CFF04554_RS06525 IPR019247 Histidine kinase BarA, N-terminal CFF04554_RS06525 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CFF04554_RS06525 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CFF04554_RS06525 IPR005467 Histidine kinase domain CFF04554_RS06530 IPR035909 Methylesterase CheB, C-terminal CFF04554_RS06530 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS06530 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CFF04554_RS06530 IPR011006 CheY-like superfamily CFF04554_RS06530 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type CFF04554_RS06535 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative CFF04554_RS06535 IPR012349 FMN-binding split barrel CFF04554_RS06535 IPR011194 Uncharacterised protein family UPF0306 CFF04554_RS06570 IPR001734 Sodium/solute symporter CFF04554_RS06570 IPR018212 Sodium/solute symporter, conserved site CFF04554_RS06570 IPR038377 Sodium/glucose symporter superfamily CFF04554_RS06570 IPR014083 Cation/acetate symporter ActP CFF04554_RS06575 IPR006683 Thioesterase domain CFF04554_RS06575 IPR029069 HotDog domain superfamily CFF04554_RS06575 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CFF04554_RS06575 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CFF04554_RS06580 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CFF04554_RS06580 IPR002579 Peptide methionine sulphoxide reductase MrsB CFF04554_RS06580 IPR011057 Mss4-like superfamily CFF04554_RS06580 IPR028427 Peptide methionine sulfoxide reductase CFF04554_RS06580 IPR002569 Peptide methionine sulphoxide reductase MsrA CFF04554_RS06590 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CFF04554_RS06590 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CFF04554_RS06590 IPR038662 F1F0 ATP synthase subunit C superfamily CFF04554_RS06590 IPR002379 V-ATPase proteolipid subunit C-like domain CFF04554_RS06590 IPR000454 ATP synthase, F0 complex, subunit C CFF04554_RS06590 IPR035921 F/V-ATP synthase subunit C superfamily CFF04554_RS06600 IPR003844 Uncharacterised protein family UPF0060 CFF04554_RS06610 IPR018060 DNA binding HTH domain, AraC-type CFF04554_RS06610 IPR009594 Transcription regulator HTH, AraC, N-terminal CFF04554_RS06610 IPR009057 Homeobox-like domain superfamily CFF04554_RS06615 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA CFF04554_RS06615 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CFF04554_RS06620 IPR020449 Transcription regulator HTH, AraC- type CFF04554_RS06620 IPR009057 Homeobox-like domain superfamily CFF04554_RS06620 IPR014710 RmlC-like jelly roll fold CFF04554_RS06620 IPR018062 HTH domain AraC-type, conserved site CFF04554_RS06620 IPR018060 DNA binding HTH domain, AraC-type CFF04554_RS06640 IPR000175 Sodium:neurotransmitter symporter CFF04554_RS06640 IPR037272 Sodium:neurotransmitter symporter superfamily CFF04554_RS06645 IPR011053 Single hybrid motif CFF04554_RS06645 IPR000891 Pyruvate carboxyltransferase CFF04554_RS06645 IPR003379 Carboxylase, conserved domain CFF04554_RS06645 IPR000089 Biotin/lipoyl attachment CFF04554_RS06645 IPR013785 Aldolase-type TIM barrel CFF04554_RS06645 IPR001882 Biotin-binding site CFF04554_RS06650 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising CFF04554_RS06650 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CFF04554_RS06650 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CFF04554_RS06650 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site CFF04554_RS06655 IPR008948 L-Aspartase-like CFF04554_RS06655 IPR029419 Argininosuccinate lyase, C-terminal CFF04554_RS06655 IPR009049 Argininosuccinate lyase CFF04554_RS06655 IPR024083 Fumarase/histidase, N-terminal CFF04554_RS06655 IPR020557 Fumarate lyase, conserved site CFF04554_RS06655 IPR022761 Fumarate lyase, N-terminal CFF04554_RS06655 IPR000362 Fumarate lyase family CFF04554_RS06670 IPR023048 NADH-azoreductase, FMN-dependent CFF04554_RS06670 IPR003680 Flavodoxin-like fold CFF04554_RS06670 IPR029039 Flavoprotein-like superfamily CFF04554_RS06680 IPR033138 Multicopper oxidases, conserved site CFF04554_RS06680 IPR011706 Multicopper oxidase, type 2 CFF04554_RS06680 IPR011707 Multicopper oxidase, type 3 CFF04554_RS06680 IPR002355 Multicopper oxidase, copper-binding site CFF04554_RS06680 IPR008972 Cupredoxin CFF04554_RS06705 IPR004540 Translation elongation factor EFG/EF2 CFF04554_RS06705 IPR035649 EFG, domain V CFF04554_RS06705 IPR009000 Translation protein, beta-barrel domain superfamily CFF04554_RS06705 IPR000795 Transcription factor, GTP-binding domain CFF04554_RS06705 IPR005225 Small GTP-binding protein domain CFF04554_RS06705 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS06705 IPR000640 Elongation factor EFG, domain V-like CFF04554_RS06705 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS06705 IPR035647 EF-G domain III/V-like CFF04554_RS06705 IPR009022 Elongation factor G, domain III CFF04554_RS06705 IPR041095 Elongation Factor G, domain II CFF04554_RS06705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06705 IPR004161 Translation elongation factor EFTu-like, domain 2 CFF04554_RS06705 IPR031157 Tr-type G domain, conserved site CFF04554_RS06705 IPR005517 Translation elongation factor EFG/EF2, domain IV CFF04554_RS06710 IPR020606 Ribosomal protein S7, conserved site CFF04554_RS06710 IPR036823 Ribosomal protein S7 domain superfamily CFF04554_RS06710 IPR000235 Ribosomal protein S5/S7 CFF04554_RS06710 IPR005717 Ribosomal protein S7, bacterial/organellar-type CFF04554_RS06710 IPR023798 Ribosomal protein S7 domain CFF04554_RS06715 IPR006032 Ribosomal protein S12/S23 CFF04554_RS06715 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS06715 IPR005679 Ribosomal protein S12, bacterial-type CFF04554_RS06720 IPR007066 RNA polymerase Rpb1, domain 3 CFF04554_RS06720 IPR006592 RNA polymerase, N-terminal CFF04554_RS06720 IPR007080 RNA polymerase Rpb1, domain 1 CFF04554_RS06720 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CFF04554_RS06720 IPR007083 RNA polymerase Rpb1, domain 4 CFF04554_RS06720 IPR007081 RNA polymerase Rpb1, domain 5 CFF04554_RS06720 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CFF04554_RS06720 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CFF04554_RS06720 IPR000722 RNA polymerase, alpha subunit CFF04554_RS06725 IPR007121 RNA polymerase, beta subunit, conserved site CFF04554_RS06725 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CFF04554_RS06725 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CFF04554_RS06725 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CFF04554_RS06725 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CFF04554_RS06725 IPR015712 DNA-directed RNA polymerase, subunit 2 CFF04554_RS06725 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CFF04554_RS06725 IPR007644 RNA polymerase, beta subunit, protrusion CFF04554_RS06725 IPR014724 RNA polymerase Rpb2, OB-fold CFF04554_RS06725 IPR007641 RNA polymerase Rpb2, domain 7 CFF04554_RS06725 IPR007642 RNA polymerase Rpb2, domain 2 CFF04554_RS06725 IPR007645 RNA polymerase Rpb2, domain 3 CFF04554_RS06725 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily CFF04554_RS06730 IPR000206 Ribosomal protein L7/L12 CFF04554_RS06730 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CFF04554_RS06730 IPR013823 Ribosomal protein L7/L12, C-terminal CFF04554_RS06730 IPR008932 Ribosomal protein L7/L12, oligomerisation CFF04554_RS06730 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CFF04554_RS06735 IPR022973 Ribosomal protein L10 CFF04554_RS06735 IPR001790 Ribosomal protein L10P CFF04554_RS06735 IPR002363 Ribosomal protein L10, eubacterial, conserved site CFF04554_RS06740 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CFF04554_RS06740 IPR005878 Ribosomal protein L1, bacterial-type CFF04554_RS06740 IPR002143 Ribosomal protein L1 CFF04554_RS06740 IPR023674 Ribosomal protein L1-like CFF04554_RS06740 IPR023673 Ribosomal protein L1, conserved site CFF04554_RS06740 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CFF04554_RS06745 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CFF04554_RS06745 IPR006519 Ribosomal protein L11, bacterial-type CFF04554_RS06745 IPR020784 Ribosomal protein L11, N-terminal CFF04554_RS06745 IPR020783 Ribosomal protein L11, C-terminal CFF04554_RS06745 IPR000911 Ribosomal protein L11/L12 CFF04554_RS06745 IPR020785 Ribosomal protein L11, conserved site CFF04554_RS06745 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CFF04554_RS06750 IPR014722 Ribosomal protein L2, domain 2 CFF04554_RS06750 IPR006645 NusG, N-terminal CFF04554_RS06750 IPR005824 KOW CFF04554_RS06750 IPR036735 NusG, N-terminal domain superfamily CFF04554_RS06750 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CFF04554_RS06750 IPR008991 Translation protein SH3-like domain superfamily CFF04554_RS06750 IPR001062 Transcription antitermination protein, NusG CFF04554_RS06765 IPR038584 Ribosomal protein L33 superfamily CFF04554_RS06765 IPR001705 Ribosomal protein L33 CFF04554_RS06765 IPR011332 Zinc-binding ribosomal protein CFF04554_RS06765 IPR018264 Ribosomal protein L33, conserved site CFF04554_RS06770 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CFF04554_RS06770 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CFF04554_RS06770 IPR000795 Transcription factor, GTP-binding domain CFF04554_RS06770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06770 IPR031157 Tr-type G domain, conserved site CFF04554_RS06770 IPR033720 Elongation factor Tu, domain 2 CFF04554_RS06770 IPR004161 Translation elongation factor EFTu-like, domain 2 CFF04554_RS06770 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CFF04554_RS06770 IPR009000 Translation protein, beta-barrel domain superfamily CFF04554_RS06770 IPR005225 Small GTP-binding protein domain CFF04554_RS06770 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CFF04554_RS06795 IPR018152 Superoxide dismutase, copper/zinc, binding site CFF04554_RS06795 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily CFF04554_RS06795 IPR001424 Superoxide dismutase, copper/zinc binding domain CFF04554_RS06795 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone CFF04554_RS06805 IPR013785 Aldolase-type TIM barrel CFF04554_RS06805 IPR001754 Orotidine 5'-phosphate decarboxylase domain CFF04554_RS06805 IPR011060 Ribulose-phosphate binding barrel CFF04554_RS06805 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CFF04554_RS06805 IPR014732 Orotidine 5'-phosphate decarboxylase CFF04554_RS06810 IPR006027 NusB/RsmB/TIM44 CFF04554_RS06810 IPR011605 NusB antitermination factor CFF04554_RS06810 IPR035926 NusB-like superfamily CFF04554_RS06815 IPR034964 Lumazine synthase CFF04554_RS06815 IPR036467 Lumazine/riboflavin synthase superfamily CFF04554_RS06815 IPR002180 Lumazine/riboflavin synthase CFF04554_RS06820 IPR000390 Small multidrug resistance protein family CFF04554_RS06830 IPR006218 DAHP synthetase I/KDSA CFF04554_RS06830 IPR006269 3-deoxy-8-phosphooctulonate synthase CFF04554_RS06830 IPR013785 Aldolase-type TIM barrel CFF04554_RS06835 IPR000620 EamA domain CFF04554_RS06840 IPR005225 Small GTP-binding protein domain CFF04554_RS06840 IPR031166 EngA-type guanine nucleotide-binding (G) domain CFF04554_RS06840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06840 IPR006073 GTP binding domain CFF04554_RS06840 IPR016484 GTP-binding protein EngA CFF04554_RS06840 IPR032859 GTPase Der, C-terminal KH-domain-like CFF04554_RS06840 IPR015946 K homology domain-like, alpha/beta CFF04554_RS06845 IPR023000 Shikimate kinase, conserved site CFF04554_RS06845 IPR000623 Shikimate kinase/Threonine synthase-like 1 CFF04554_RS06845 IPR031322 Shikimate kinase/gluconokinase CFF04554_RS06845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06850 IPR024109 Tryptophan-tRNA ligase, bacterial-type CFF04554_RS06850 IPR002306 Tryptophan-tRNA ligase CFF04554_RS06850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06850 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFF04554_RS06850 IPR002305 Aminoacyl-tRNA synthetase, class Ic CFF04554_RS06855 IPR006195 Aminoacyl-tRNA synthetase, class II CFF04554_RS06855 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CFF04554_RS06855 IPR002317 Serine-tRNA ligase, type1 CFF04554_RS06855 IPR033729 Serine-tRNA ligase catalytic core domain CFF04554_RS06855 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CFF04554_RS06855 IPR015866 Serine-tRNA synthetase, type1, N-terminal CFF04554_RS06855 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CFF04554_RS06865 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CFF04554_RS06865 IPR000891 Pyruvate carboxyltransferase CFF04554_RS06865 IPR005671 2-isopropylmalate synthase, bacterial-type CFF04554_RS06865 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CFF04554_RS06865 IPR013785 Aldolase-type TIM barrel CFF04554_RS06865 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CFF04554_RS06870 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CFF04554_RS06870 IPR000462 CDP-alcohol phosphatidyltransferase CFF04554_RS06875 IPR033175 Phosphatidylserine decarboxylase, archaeal-type CFF04554_RS06875 IPR003817 Phosphatidylserine decarboxylase-related CFF04554_RS06880 IPR037219 Peptidase M41-like CFF04554_RS06880 IPR041569 AAA ATPase, AAA+ lid domain CFF04554_RS06880 IPR003960 ATPase, AAA-type, conserved site CFF04554_RS06880 IPR005936 Peptidase, FtsH CFF04554_RS06880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS06880 IPR000642 Peptidase M41 CFF04554_RS06880 IPR003959 ATPase, AAA-type, core CFF04554_RS06880 IPR003593 AAA+ ATPase domain CFF04554_RS06885 IPR004498 Ribosomal protein L11 methyltransferase CFF04554_RS06885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS06890 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS06890 IPR011006 CheY-like superfamily CFF04554_RS06895 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CFF04554_RS06895 IPR011060 Ribulose-phosphate binding barrel CFF04554_RS06895 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CFF04554_RS06895 IPR013785 Aldolase-type TIM barrel CFF04554_RS06895 IPR006062 Histidine biosynthesis CFF04554_RS06900 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS06900 IPR010139 Imidazole glycerol phosphate synthase, subunit H CFF04554_RS06900 IPR017926 Glutamine amidotransferase CFF04554_RS06910 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS06910 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CFF04554_RS06910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS06915 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS06915 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS06915 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS06915 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS06920 IPR029039 Flavoprotein-like superfamily CFF04554_RS06920 IPR003680 Flavodoxin-like fold CFF04554_RS06930 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CFF04554_RS06930 IPR013221 Mur ligase, central CFF04554_RS06930 IPR036615 Mur ligase, C-terminal domain superfamily CFF04554_RS06930 IPR036565 Mur-like, catalytic domain superfamily CFF04554_RS06935 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CFF04554_RS06935 IPR000715 Glycosyl transferase, family 4 CFF04554_RS06935 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CFF04554_RS06940 IPR006124 Metalloenzyme CFF04554_RS06940 IPR017850 Alkaline-phosphatase-like, core domain superfamily CFF04554_RS06940 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily CFF04554_RS06940 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent CFF04554_RS06940 IPR011258 BPG-independent PGAM, N-terminal CFF04554_RS06945 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS06945 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFF04554_RS06945 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CFF04554_RS06945 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS06950 IPR009081 Phosphopantetheine binding ACP domain CFF04554_RS06950 IPR003231 Acyl carrier protein (ACP) CFF04554_RS06950 IPR036736 ACP-like superfamily CFF04554_RS06950 IPR006162 Phosphopantetheine attachment site CFF04554_RS06955 IPR014031 Beta-ketoacyl synthase, C-terminal CFF04554_RS06955 IPR014030 Beta-ketoacyl synthase, N-terminal CFF04554_RS06955 IPR018201 Beta-ketoacyl synthase, active site CFF04554_RS06955 IPR000794 Beta-ketoacyl synthase CFF04554_RS06955 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CFF04554_RS06955 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CFF04554_RS06955 IPR016039 Thiolase-like CFF04554_RS06960 IPR001095 Acetyl-CoA carboxylase, alpha subunit CFF04554_RS06960 IPR029045 ClpP/crotonase-like domain superfamily CFF04554_RS06960 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CFF04554_RS06970 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CFF04554_RS06970 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CFF04554_RS06970 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CFF04554_RS06970 IPR023753 FAD/NAD(P)-binding domain CFF04554_RS06970 IPR036188 FAD/NAD(P)-binding domain superfamily CFF04554_RS06970 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CFF04554_RS06980 IPR004374 Peptide chain release factor 2 CFF04554_RS06980 IPR000352 Peptide chain release factor class I CFF04554_RS06980 IPR005139 Peptide chain release factor CFF04554_RS06985 IPR004821 Cytidyltransferase-like domain CFF04554_RS06985 IPR003721 Pantoate-beta-alanine ligase CFF04554_RS06985 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS06985 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CFF04554_RS06990 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CFF04554_RS06990 IPR038135 Methylthiotransferase, N-terminal domain superfamily CFF04554_RS06990 IPR005839 Methylthiotransferase CFF04554_RS06990 IPR013848 Methylthiotransferase, N-terminal CFF04554_RS06990 IPR007197 Radical SAM CFF04554_RS06990 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS06990 IPR041582 RimO, TRAM domain CFF04554_RS06990 IPR002792 TRAM domain CFF04554_RS06990 IPR020612 Methylthiotransferase, conserved site CFF04554_RS06990 IPR006638 Elp3/MiaB/NifB CFF04554_RS06995 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CFF04554_RS06995 IPR012094 tRNA(Ile)-lysidine synthase CFF04554_RS06995 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CFF04554_RS06995 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07015 IPR007172 Domain of unknown function DUF374 CFF04554_RS07020 IPR002792 TRAM domain CFF04554_RS07020 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CFF04554_RS07020 IPR007197 Radical SAM CFF04554_RS07020 IPR013848 Methylthiotransferase, N-terminal CFF04554_RS07020 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS07020 IPR005839 Methylthiotransferase CFF04554_RS07020 IPR020612 Methylthiotransferase, conserved site CFF04554_RS07020 IPR038135 Methylthiotransferase, N-terminal domain superfamily CFF04554_RS07020 IPR006638 Elp3/MiaB/NifB CFF04554_RS07030 IPR010213 Transcription termination factor NusA CFF04554_RS07030 IPR015946 K homology domain-like, alpha/beta CFF04554_RS07030 IPR013735 Transcription factor NusA, N-terminal CFF04554_RS07030 IPR022967 RNA-binding domain, S1 CFF04554_RS07030 IPR009019 K homology domain superfamily, prokaryotic type CFF04554_RS07030 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS07030 IPR003029 S1 domain CFF04554_RS07030 IPR030842 Transcription termination/antitermination protein NusA, bacterial CFF04554_RS07030 IPR025249 KH domain, NusA-like CFF04554_RS07030 IPR036555 NusA, N-terminal domain superfamily CFF04554_RS07040 IPR003362 Bacterial sugar transferase CFF04554_RS07045 IPR001296 Glycosyl transferase, family 1 CFF04554_RS07045 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS07050 IPR003674 Oligosaccharyl transferase, STT3 subunit CFF04554_RS07050 IPR041563 STT3 subunit PglB, C-terminal beta-barrel domain CFF04554_RS07055 IPR001296 Glycosyl transferase, family 1 CFF04554_RS07055 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS07060 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS07060 IPR017814 Mycothiol biosynthesis protein, MshA CFF04554_RS07060 IPR001296 Glycosyl transferase, family 1 CFF04554_RS07065 IPR001296 Glycosyl transferase, family 1 CFF04554_RS07065 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS07070 IPR002797 Polysaccharide biosynthesis protein CFF04554_RS07070 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CFF04554_RS07075 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CFF04554_RS07075 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CFF04554_RS07075 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFF04554_RS07075 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CFF04554_RS07075 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CFF04554_RS07075 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07075 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CFF04554_RS07075 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CFF04554_RS07080 IPR005886 UDP-glucose 4-epimerase CFF04554_RS07080 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07080 IPR001509 NAD-dependent epimerase/dehydratase CFF04554_RS07100 IPR001509 NAD-dependent epimerase/dehydratase CFF04554_RS07100 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07105 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07105 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFF04554_RS07105 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CFF04554_RS07105 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CFF04554_RS07105 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CFF04554_RS07105 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CFF04554_RS07105 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CFF04554_RS07105 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CFF04554_RS07125 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS07125 IPR001173 Glycosyltransferase 2-like CFF04554_RS07130 IPR011916 Lipopolysaccharide heptosyltransferase III, putative CFF04554_RS07130 IPR002201 Glycosyl transferase, family 9 CFF04554_RS07135 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CFF04554_RS07135 IPR002509 NodB homology domain CFF04554_RS07155 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS07155 IPR017814 Mycothiol biosynthesis protein, MshA CFF04554_RS07155 IPR001296 Glycosyl transferase, family 1 CFF04554_RS07160 IPR002201 Glycosyl transferase, family 9 CFF04554_RS07175 IPR002201 Glycosyl transferase, family 9 CFF04554_RS07180 IPR035461 GmhA/DiaA CFF04554_RS07180 IPR004515 Phosphoheptose isomerase CFF04554_RS07180 IPR001347 Sugar isomerase (SIS) CFF04554_RS07190 IPR004821 Cytidyltransferase-like domain CFF04554_RS07190 IPR023030 Bifunctional protein HldE CFF04554_RS07190 IPR011611 Carbohydrate kinase PfkB CFF04554_RS07190 IPR011913 RfaE bifunctional protein, domain I CFF04554_RS07190 IPR011914 RfaE bifunctional protein, domain II CFF04554_RS07190 IPR029056 Ribokinase-like CFF04554_RS07190 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07195 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07195 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase CFF04554_RS07195 IPR001509 NAD-dependent epimerase/dehydratase CFF04554_RS07200 IPR013954 Polynucleotide kinase 3 phosphatase CFF04554_RS07200 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CFF04554_RS07200 IPR023214 HAD superfamily CFF04554_RS07200 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase CFF04554_RS07200 IPR006543 Histidinol-phosphate phosphatase CFF04554_RS07200 IPR036412 HAD-like superfamily CFF04554_RS07210 IPR034061 Autotransporter serine protease peptidase domain CFF04554_RS07210 IPR015500 Peptidase S8, subtilisin-related CFF04554_RS07210 IPR005546 Autotransporter beta-domain CFF04554_RS07210 IPR022398 Peptidase S8, subtilisin, His-active site CFF04554_RS07210 IPR036852 Peptidase S8/S53 domain superfamily CFF04554_RS07210 IPR000209 Peptidase S8/S53 domain CFF04554_RS07210 IPR011050 Pectin lyase fold/virulence factor CFF04554_RS07210 IPR006315 Outer membrane autotransporter barrel CFF04554_RS07210 IPR013425 Autotransporter-associated beta strand repeat CFF04554_RS07210 IPR023828 Peptidase S8, subtilisin, Ser-active site CFF04554_RS07210 IPR036709 Autotransporter beta-domain superfamily CFF04554_RS07225 IPR036412 HAD-like superfamily CFF04554_RS07225 IPR001757 P-type ATPase CFF04554_RS07225 IPR036163 Heavy metal-associated domain superfamily CFF04554_RS07225 IPR008250 P-type ATPase, A domain superfamily CFF04554_RS07225 IPR023298 P-type ATPase, transmembrane domain superfamily CFF04554_RS07225 IPR006121 Heavy metal-associated domain, HMA CFF04554_RS07225 IPR006122 Heavy metal-associated domain, copper ion-binding CFF04554_RS07225 IPR017969 Heavy-metal-associated, conserved site CFF04554_RS07225 IPR018303 P-type ATPase, phosphorylation site CFF04554_RS07225 IPR027256 P-type ATPase, subfamily IB CFF04554_RS07225 IPR023299 P-type ATPase, cytoplasmic domain N CFF04554_RS07225 IPR023214 HAD superfamily CFF04554_RS07235 IPR036269 Rho termination factor, N-terminal domain superfamily CFF04554_RS07235 IPR011112 Rho termination factor, N-terminal CFF04554_RS07235 IPR041703 Transcription termination factor Rho, ATP binding domain CFF04554_RS07235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07235 IPR012340 Nucleic acid-binding, OB-fold CFF04554_RS07235 IPR011129 Cold shock domain CFF04554_RS07235 IPR011113 Rho termination factor, RNA-binding domain CFF04554_RS07235 IPR004665 Transcription termination factor Rho CFF04554_RS07235 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CFF04554_RS07235 IPR003593 AAA+ ATPase domain CFF04554_RS07240 IPR021029 DNA polymerase III, tau subunit, domain V CFF04554_RS07240 IPR012763 DNA polymerase III, subunit gamma/ tau CFF04554_RS07240 IPR022754 DNA polymerase III, gamma subunit, domain III CFF04554_RS07240 IPR003593 AAA+ ATPase domain CFF04554_RS07240 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV CFF04554_RS07240 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CFF04554_RS07240 IPR001270 ClpA/B family CFF04554_RS07240 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07240 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily CFF04554_RS07265 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07265 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS07265 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CFF04554_RS07270 IPR000652 Triosephosphate isomerase CFF04554_RS07270 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CFF04554_RS07270 IPR035990 Triosephosphate isomerase superfamily CFF04554_RS07270 IPR020861 Triosephosphate isomerase, active site CFF04554_RS07270 IPR013785 Aldolase-type TIM barrel CFF04554_RS07275 IPR001576 Phosphoglycerate kinase CFF04554_RS07275 IPR036043 Phosphoglycerate kinase superfamily CFF04554_RS07275 IPR015824 Phosphoglycerate kinase, N-terminal CFF04554_RS07280 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CFF04554_RS07280 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CFF04554_RS07280 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CFF04554_RS07280 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CFF04554_RS07280 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07280 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CFF04554_RS07285 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase CFF04554_RS07285 IPR004821 Cytidyltransferase-like domain CFF04554_RS07285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07290 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CFF04554_RS07295 IPR004630 Uncharacterised protein family UPF0324, bacteria CFF04554_RS07295 IPR018383 Uncharacterised protein family UPF0324, prokaryote CFF04554_RS07300 IPR000847 Transcription regulator HTH, LysR CFF04554_RS07300 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS07300 IPR005119 LysR, substrate-binding CFF04554_RS07300 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS07305 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFF04554_RS07305 IPR001278 Arginine-tRNA ligase CFF04554_RS07305 IPR005148 Arginyl tRNA synthetase N-terminal domain CFF04554_RS07305 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily CFF04554_RS07305 IPR035684 Arginyl-tRNA synthetase, catalytic core domain CFF04554_RS07305 IPR008909 DALR anticodon binding CFF04554_RS07305 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07305 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CFF04554_RS07310 IPR003369 Sec-independent protein translocase protein TatA/B/E CFF04554_RS07310 IPR006312 Sec-independent protein translocase protein TatA/E CFF04554_RS07315 IPR020590 Guanylate kinase, conserved site CFF04554_RS07315 IPR017665 Guanylate kinase CFF04554_RS07315 IPR008144 Guanylate kinase-like domain CFF04554_RS07315 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CFF04554_RS07315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07325 IPR006303 Flagellar biosynthesis protein FliR CFF04554_RS07325 IPR002010 Type III secretion system inner membrane R protein CFF04554_RS07335 IPR003593 AAA+ ATPase domain CFF04554_RS07335 IPR003439 ABC transporter-like CFF04554_RS07335 IPR017871 ABC transporter, conserved site CFF04554_RS07335 IPR015854 ABC transporter, lipoprotein release, LolD CFF04554_RS07335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07340 IPR018101 Translation elongation factor Ts, conserved site CFF04554_RS07340 IPR036402 Elongation factor Ts, dimerisation domain superfamily CFF04554_RS07340 IPR001816 Translation elongation factor EFTs/EF1B CFF04554_RS07340 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CFF04554_RS07340 IPR009060 UBA-like superfamily CFF04554_RS07345 IPR001865 Ribosomal protein S2 CFF04554_RS07345 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CFF04554_RS07345 IPR018130 Ribosomal protein S2, conserved site CFF04554_RS07345 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CFF04554_RS07355 IPR011324 Cytotoxic necrotizing factor-like, catalytic CFF04554_RS07355 IPR038371 Multi-copper polyphenol oxidoreductase superfamily CFF04554_RS07355 IPR003730 Multi-copper polyphenol oxidoreductase CFF04554_RS07360 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CFF04554_RS07360 IPR001783 Lumazine-binding protein CFF04554_RS07360 IPR026017 Lumazine-binding domain CFF04554_RS07360 IPR017938 Riboflavin synthase-like beta-barrel CFF04554_RS07365 IPR036188 FAD/NAD(P)-binding domain superfamily CFF04554_RS07365 IPR020595 MnmG-related, conserved site CFF04554_RS07365 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CFF04554_RS07365 IPR026904 GidA associated domain 3 CFF04554_RS07365 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CFF04554_RS07370 IPR006311 Twin-arginine translocation pathway, signal sequence CFF04554_RS07370 IPR005805 Rieske iron-sulphur protein, C-terminal CFF04554_RS07370 IPR014349 Rieske iron-sulphur protein CFF04554_RS07370 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CFF04554_RS07370 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CFF04554_RS07370 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit CFF04554_RS07370 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CFF04554_RS07370 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal CFF04554_RS07375 IPR005798 Cytochrome b/b6, C-terminal CFF04554_RS07375 IPR030689 Cytochrome b CFF04554_RS07375 IPR027387 Cytochrome b/b6-like domain superfamily CFF04554_RS07375 IPR005797 Cytochrome b/b6, N-terminal CFF04554_RS07375 IPR036150 Cytochrome b/b6, C-terminal domain superfamily CFF04554_RS07375 IPR016174 Di-haem cytochrome, transmembrane CFF04554_RS07425 IPR040084 GTPase Obg CFF04554_RS07425 IPR013785 Aldolase-type TIM barrel CFF04554_RS07425 IPR007197 Radical SAM CFF04554_RS07430 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CFF04554_RS07430 IPR038071 UROD/MetE-like superfamily CFF04554_RS07430 IPR006361 Uroporphyrinogen decarboxylase HemE CFF04554_RS07440 IPR012080 Aspartate-semialdehyde dehydrogenase CFF04554_RS07440 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type CFF04554_RS07440 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07440 IPR000534 Semialdehyde dehydrogenase, NAD-binding CFF04554_RS07440 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CFF04554_RS07440 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CFF04554_RS07445 IPR003593 AAA+ ATPase domain CFF04554_RS07445 IPR011006 CheY-like superfamily CFF04554_RS07445 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CFF04554_RS07445 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CFF04554_RS07445 IPR002078 RNA polymerase sigma factor 54 interaction domain CFF04554_RS07445 IPR029995 Transcriptional activator SfnR/FlbD CFF04554_RS07445 IPR001789 Signal transduction response regulator, receiver domain CFF04554_RS07445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07460 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CFF04554_RS07460 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CFF04554_RS07460 IPR005743 DNA gyrase, subunit A CFF04554_RS07460 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CFF04554_RS07460 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CFF04554_RS07460 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CFF04554_RS07460 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CFF04554_RS07505 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type CFF04554_RS07505 IPR014347 Tautomerase/MIF superfamily CFF04554_RS07505 IPR004370 4-oxalocrotonate tautomerase CFF04554_RS07510 IPR006297 Elongation factor 4 CFF04554_RS07510 IPR035647 EF-G domain III/V-like CFF04554_RS07510 IPR000640 Elongation factor EFG, domain V-like CFF04554_RS07510 IPR004161 Translation elongation factor EFTu-like, domain 2 CFF04554_RS07510 IPR031157 Tr-type G domain, conserved site CFF04554_RS07510 IPR038363 LepA, C-terminal domain superfamily CFF04554_RS07510 IPR013842 GTP-binding protein LepA, C-terminal CFF04554_RS07510 IPR000795 Transcription factor, GTP-binding domain CFF04554_RS07510 IPR005225 Small GTP-binding protein domain CFF04554_RS07510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07510 IPR035654 Elongation factor 4, domain IV CFF04554_RS07515 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CFF04554_RS07515 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CFF04554_RS07515 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CFF04554_RS07515 IPR005946 Ribose-phosphate pyrophosphokinase CFF04554_RS07515 IPR029057 Phosphoribosyltransferase-like CFF04554_RS07515 IPR000836 Phosphoribosyltransferase domain CFF04554_RS07520 IPR006130 Aspartate/ornithine carbamoyltransferase CFF04554_RS07520 IPR002082 Aspartate carbamoyltransferase CFF04554_RS07520 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CFF04554_RS07520 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CFF04554_RS07520 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CFF04554_RS07525 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFF04554_RS07525 IPR002195 Dihydroorotase, conserved site CFF04554_RS07525 IPR004722 Dihydroorotase CFF04554_RS07525 IPR006680 Amidohydrolase-related CFF04554_RS07525 IPR032466 Metal-dependent hydrolase CFF04554_RS07535 IPR012902 Prokaryotic N-terminal methylation site CFF04554_RS07535 IPR013545 Type II secretion system protein G CFF04554_RS07535 IPR000983 Bacterial general secretion pathway protein G-type pilin CFF04554_RS07535 IPR010054 General secretion pathway protein G CFF04554_RS07545 IPR023382 Adenine nucleotide alpha hydrolase-like domains CFF04554_RS07545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07545 IPR004506 tRNA-specific 2-thiouridylase CFF04554_RS07560 IPR031100 LOG family CFF04554_RS07560 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CFF04554_RS07565 IPR009051 Alpha-helical ferredoxin CFF04554_RS07565 IPR023753 FAD/NAD(P)-binding domain CFF04554_RS07565 IPR036188 FAD/NAD(P)-binding domain superfamily CFF04554_RS07565 IPR028261 Dihydroprymidine dehydrogenase domain II CFF04554_RS07565 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 CFF04554_RS07565 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS07570 IPR013785 Aldolase-type TIM barrel CFF04554_RS07570 IPR002489 Glutamate synthase, alpha subunit, C-terminal CFF04554_RS07570 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily CFF04554_RS07570 IPR006982 Glutamate synthase, central-N CFF04554_RS07570 IPR002932 Glutamate synthase domain CFF04554_RS07570 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS07570 IPR017932 Glutamine amidotransferase type 2 domain CFF04554_RS07575 IPR016192 APOBEC/CMP deaminase, zinc-binding CFF04554_RS07575 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CFF04554_RS07575 IPR011549 Riboflavin-specific deaminase, C-terminal CFF04554_RS07575 IPR004794 Riboflavin biosynthesis protein RibD CFF04554_RS07575 IPR024072 Dihydrofolate reductase-like domain superfamily CFF04554_RS07575 IPR016193 Cytidine deaminase-like CFF04554_RS07575 IPR002125 Cytidine and deoxycytidylate deaminase domain CFF04554_RS07590 IPR028998 Ribosome maturation factor RimP, C-terminal CFF04554_RS07590 IPR003728 Ribosome maturation factor RimP CFF04554_RS07590 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CFF04554_RS07590 IPR035956 RimP, N-terminal domain superfamily CFF04554_RS07590 IPR028989 Ribosome maturation factor RimP, N-terminal CFF04554_RS07595 IPR015946 K homology domain-like, alpha/beta CFF04554_RS07595 IPR000238 Ribosome-binding factor A CFF04554_RS07595 IPR023799 Ribosome-binding factor A domain superfamily CFF04554_RS07595 IPR020053 Ribosome-binding factor A, conserved site CFF04554_RS07600 IPR009000 Translation protein, beta-barrel domain superfamily CFF04554_RS07600 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CFF04554_RS07600 IPR023115 Translation initiation factor IF- 2, domain 3 CFF04554_RS07600 IPR015760 Translation initiation factor IF- 2 CFF04554_RS07600 IPR000178 Translation initiation factor aIF-2, bacterial-like CFF04554_RS07600 IPR000795 Transcription factor, GTP-binding domain CFF04554_RS07600 IPR005225 Small GTP-binding protein domain CFF04554_RS07600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07600 IPR006847 Translation initiation factor IF-2, N-terminal CFF04554_RS07610 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS07610 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS07610 IPR000870 Homoserine kinase CFF04554_RS07610 IPR036554 GHMP kinase, C-terminal domain superfamily CFF04554_RS07610 IPR006204 GHMP kinase N-terminal domain CFF04554_RS07610 IPR006203 GHMP kinase, ATP-binding, conserved site CFF04554_RS07620 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CFF04554_RS07620 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CFF04554_RS07620 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS07620 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CFF04554_RS07625 IPR003719 Phenazine biosynthesis PhzF protein CFF04554_RS07635 IPR002912 ACT domain CFF04554_RS07635 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07635 IPR003099 Prephenate dehydrogenase CFF04554_RS07635 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFF04554_RS07640 IPR039910 Surface antigen D15-like CFF04554_RS07640 IPR023707 Outer membrane protein assembly factor BamA CFF04554_RS07640 IPR000184 Bacterial surface antigen (D15) CFF04554_RS07640 IPR034746 POTRA domain CFF04554_RS07640 IPR010827 POTRA domain, BamA/TamA-like CFF04554_RS07645 IPR011037 Pyruvate kinase-like, insert domain superfamily CFF04554_RS07645 IPR005302 Molybdenum cofactor sulfurase, C-terminal CFF04554_RS07650 IPR004635 Peptidase S49, SppA CFF04554_RS07650 IPR029045 ClpP/crotonase-like domain superfamily CFF04554_RS07650 IPR002142 Peptidase S49 CFF04554_RS07655 IPR011059 Metal-dependent hydrolase, composite domain superfamily CFF04554_RS07655 IPR006680 Amidohydrolase-related CFF04554_RS07655 IPR032466 Metal-dependent hydrolase CFF04554_RS07660 IPR018509 Dehydroquinase, class II, conserved site CFF04554_RS07660 IPR001874 Dehydroquinase, class II CFF04554_RS07660 IPR036441 Dehydroquinase, class II superfamily CFF04554_RS07665 IPR000587 Creatinase, N-terminal CFF04554_RS07665 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CFF04554_RS07665 IPR000994 Peptidase M24 CFF04554_RS07665 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CFF04554_RS07665 IPR036005 Creatinase/aminopeptidase-like CFF04554_RS07670 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CFF04554_RS07670 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CFF04554_RS07675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07675 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CFF04554_RS07675 IPR003593 AAA+ ATPase domain CFF04554_RS07675 IPR020006 Flagellar biosynthesis protein FlhF CFF04554_RS07680 IPR025501 ATP binding protein MinD CFF04554_RS07680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07680 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CFF04554_RS07690 IPR007624 RNA polymerase sigma-70 region 3 CFF04554_RS07690 IPR014284 RNA polymerase sigma-70 like domain CFF04554_RS07690 IPR000943 RNA polymerase sigma-70 CFF04554_RS07690 IPR007627 RNA polymerase sigma-70 region 2 CFF04554_RS07690 IPR012845 RNA polymerase sigma factor, FliA/WhiG CFF04554_RS07690 IPR013325 RNA polymerase sigma factor, region 2 CFF04554_RS07690 IPR013324 RNA polymerase sigma factor, region 3/4-like CFF04554_RS07690 IPR028617 RNA polymerase sigma factor FliA CFF04554_RS07690 IPR007630 RNA polymerase sigma-70 region 4 CFF04554_RS07695 IPR001543 Surface presentation of antigen (SpoA) CFF04554_RS07695 IPR028976 CheC-like superfamily CFF04554_RS07695 IPR001689 Flagellar motor switch protein FliM CFF04554_RS07695 IPR036429 SpoA-like superfamily CFF04554_RS07700 IPR007597 CheC-like protein CFF04554_RS07700 IPR028976 CheC-like superfamily CFF04554_RS07700 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CFF04554_RS07700 IPR001543 Surface presentation of antigen (SpoA) CFF04554_RS07700 IPR012826 Flagellar motor switch FliN CFF04554_RS07700 IPR036429 SpoA-like superfamily CFF04554_RS07705 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07705 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CFF04554_RS07705 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase CFF04554_RS07705 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type CFF04554_RS07710 IPR035994 Nucleoside phosphorylase superfamily CFF04554_RS07710 IPR010049 MTA/SAH nucleosidase CFF04554_RS07710 IPR000845 Nucleoside phosphorylase domain CFF04554_RS07715 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CFF04554_RS07715 IPR001227 Acyl transferase domain superfamily CFF04554_RS07715 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CFF04554_RS07715 IPR024925 Malonyl CoA-acyl carrier protein transacylase CFF04554_RS07715 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CFF04554_RS07715 IPR014043 Acyl transferase CFF04554_RS07720 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CFF04554_RS07735 IPR007195 TolB, N-terminal CFF04554_RS07735 IPR014167 Tol-Pal system protein TolB CFF04554_RS07735 IPR011042 Six-bladed beta-propeller, TolB-like CFF04554_RS07745 IPR003400 Biopolymer transport protein ExbD/TolR CFF04554_RS07750 IPR017269 Biopolymer transport ExbB-like protein 1 CFF04554_RS07750 IPR002898 MotA/TolQ/ExbB proton channel CFF04554_RS07755 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CFF04554_RS07755 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CFF04554_RS07755 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CFF04554_RS07760 IPR003593 AAA+ ATPase domain CFF04554_RS07760 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CFF04554_RS07760 IPR005722 ATP synthase, F1 complex, beta subunit CFF04554_RS07760 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CFF04554_RS07760 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CFF04554_RS07760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07760 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CFF04554_RS07760 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CFF04554_RS07765 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CFF04554_RS07765 IPR000131 ATP synthase, F1 complex, gamma subunit CFF04554_RS07770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07770 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CFF04554_RS07770 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CFF04554_RS07770 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CFF04554_RS07770 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CFF04554_RS07770 IPR005294 ATP synthase, F1 complex, alpha subunit CFF04554_RS07770 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CFF04554_RS07770 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CFF04554_RS07770 IPR000793 ATP synthase, alpha subunit, C-terminal CFF04554_RS07770 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CFF04554_RS07775 IPR000711 ATPase, OSCP/delta subunit CFF04554_RS07775 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily CFF04554_RS07780 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CFF04554_RS07785 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CFF04554_RS07785 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CFF04554_RS07785 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CFF04554_RS07790 IPR036086 ParB/Sulfiredoxin superfamily CFF04554_RS07790 IPR004437 ParB/RepB/Spo0J partition protein CFF04554_RS07790 IPR041468 ParB/Spo0J, HTH domain CFF04554_RS07790 IPR003115 ParB/Sulfiredoxin CFF04554_RS07795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07795 IPR025669 AAA domain CFF04554_RS07800 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS07800 IPR030855 Bifunctional ligase/repressor BirA CFF04554_RS07800 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CFF04554_RS07800 IPR004409 Biotin operon repressor, helix-turn-helix domain CFF04554_RS07800 IPR003142 Biotin protein ligase, C-terminal CFF04554_RS07800 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CFF04554_RS07800 IPR013196 Helix-turn-helix, type 11 CFF04554_RS07800 IPR008988 Transcriptional repressor, C-terminal CFF04554_RS07800 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS07805 IPR005794 Methionyl-tRNA formyltransferase CFF04554_RS07805 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CFF04554_RS07805 IPR011034 Formyl transferase-like, C-terminal domain superfamily CFF04554_RS07805 IPR036477 Formyl transferase, N-terminal domain superfamily CFF04554_RS07805 IPR002376 Formyl transferase, N-terminal CFF04554_RS07805 IPR037022 Formyl transferase, C-terminal domain superfamily CFF04554_RS07805 IPR005793 Formyl transferase, C-terminal CFF04554_RS07810 IPR041739 Glutamate-5-kinase domain CFF04554_RS07810 IPR001057 Glutamate/acetylglutamate kinase CFF04554_RS07810 IPR011529 Glutamate 5-kinase CFF04554_RS07810 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CFF04554_RS07810 IPR036393 Acetylglutamate kinase-like superfamily CFF04554_RS07810 IPR001048 Aspartate/glutamate/uridylate kinase CFF04554_RS07810 IPR019797 Glutamate 5-kinase, conserved site CFF04554_RS07815 IPR036726 GTP1/OBG domain superfamily CFF04554_RS07815 IPR035101 GTP-binding protein, Obg-type CFF04554_RS07815 IPR006073 GTP binding domain CFF04554_RS07815 IPR006074 GTP1/OBG, conserved site CFF04554_RS07815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07815 IPR006169 GTP1/OBG domain CFF04554_RS07815 IPR031167 OBG-type guanine nucleotide-binding (G) domain CFF04554_RS07815 IPR014100 GTP-binding protein Obg/CgtA CFF04554_RS07820 IPR001684 Ribosomal protein L27 CFF04554_RS07820 IPR018261 Ribosomal protein L27, conserved site CFF04554_RS07825 IPR001787 Ribosomal protein L21 CFF04554_RS07825 IPR036164 L21-like superfamily CFF04554_RS07825 IPR018258 Ribosomal protein L21, conserved site CFF04554_RS07825 IPR028909 Ribosomal protein L21-like CFF04554_RS07830 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CFF04554_RS07830 IPR004852 Di-haem cytochrome c peroxidase CFF04554_RS07830 IPR036909 Cytochrome c-like domain superfamily CFF04554_RS07830 IPR009056 Cytochrome c-like domain CFF04554_RS07835 IPR000813 7Fe ferredoxin CFF04554_RS07835 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CFF04554_RS07835 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CFF04554_RS07840 IPR006443 Formate dehydrogenase-N, alpha subunit CFF04554_RS07840 IPR009010 Aspartate decarboxylase-like domain superfamily CFF04554_RS07840 IPR006311 Twin-arginine translocation pathway, signal sequence CFF04554_RS07840 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CFF04554_RS07840 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CFF04554_RS07840 IPR006656 Molybdopterin oxidoreductase CFF04554_RS07840 IPR006657 Molybdopterin dinucleotide-binding domain CFF04554_RS07840 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CFF04554_RS07845 IPR006657 Molybdopterin dinucleotide-binding domain CFF04554_RS07845 IPR009010 Aspartate decarboxylase-like domain superfamily CFF04554_RS07845 IPR006656 Molybdopterin oxidoreductase CFF04554_RS07845 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CFF04554_RS07865 IPR018319 L-seryl-tRNA selenium transferase-like CFF04554_RS07865 IPR004534 L-seryl-tRNA(Sec) selenium transferase CFF04554_RS07865 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS07865 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS07870 IPR015191 Translation elongation factor SelB, winged helix, type 3 CFF04554_RS07870 IPR005225 Small GTP-binding protein domain CFF04554_RS07870 IPR000795 Transcription factor, GTP-binding domain CFF04554_RS07870 IPR009000 Translation protein, beta-barrel domain superfamily CFF04554_RS07870 IPR015190 Translation elongation factor SelB, winged helix, type 2 CFF04554_RS07870 IPR015189 Translation elongation factor SelB, winged helix, type 1 CFF04554_RS07870 IPR004535 Translation elongation factor, selenocysteine-specific CFF04554_RS07870 IPR004161 Translation elongation factor EFTu-like, domain 2 CFF04554_RS07870 IPR036388 Winged helix-like DNA-binding domain superfamily CFF04554_RS07870 IPR036390 Winged helix DNA-binding domain superfamily CFF04554_RS07870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS07870 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CFF04554_RS07880 IPR003329 Acylneuraminate cytidylyltransferase CFF04554_RS07880 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS07880 IPR020039 Pseudaminic acid cytidylyltransferase CFF04554_RS07905 IPR013132 N-acetylneuraminic acid synthase, N-terminal CFF04554_RS07905 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CFF04554_RS07905 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily CFF04554_RS07905 IPR013785 Aldolase-type TIM barrel CFF04554_RS07905 IPR020030 Pseudaminic acid biosynthesis, PseI CFF04554_RS07905 IPR013974 SAF domain CFF04554_RS07910 IPR033524 Leu/Phe/Val dehydrogenases active site CFF04554_RS07910 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CFF04554_RS07910 IPR014362 Glutamate dehydrogenase CFF04554_RS07910 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07910 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CFF04554_RS07910 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CFF04554_RS07910 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CFF04554_RS07915 IPR030868 Chorismate dehydratase CFF04554_RS07915 IPR003773 Menaquinone biosynthesis enzyme CFF04554_RS07920 IPR034332 Uracil phosphoribosyltransferase, bacterial-type CFF04554_RS07920 IPR000836 Phosphoribosyltransferase domain CFF04554_RS07920 IPR005765 Uracil phosphoribosyl transferase CFF04554_RS07920 IPR029057 Phosphoribosyltransferase-like CFF04554_RS07925 IPR042113 Phosphate acetyltransferase, domain 1 CFF04554_RS07925 IPR012188 NAD(P)-dependent malic enzyme CFF04554_RS07925 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07925 IPR012301 Malic enzyme, N-terminal domain CFF04554_RS07925 IPR015884 Malic enzyme, conserved site CFF04554_RS07925 IPR012302 Malic enzyme, NAD-binding CFF04554_RS07925 IPR037062 Malic enzyme, N-terminal domain superfamily CFF04554_RS07925 IPR002505 Phosphate acetyl/butaryl transferase CFF04554_RS07925 IPR042112 Phosphate acetyltransferase, domain 2 CFF04554_RS07935 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CFF04554_RS07935 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CFF04554_RS07935 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CFF04554_RS07935 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CFF04554_RS07935 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CFF04554_RS07935 IPR033910 Glutamyl-tRNA synthetase CFF04554_RS07935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS07935 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CFF04554_RS07945 IPR013815 ATP-grasp fold, subdomain 1 CFF04554_RS07945 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CFF04554_RS07945 IPR011761 ATP-grasp fold CFF04554_RS07945 IPR005481 Biotin carboxylase-like, N-terminal domain CFF04554_RS07945 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CFF04554_RS07945 IPR005482 Biotin carboxylase, C-terminal CFF04554_RS07945 IPR016185 Pre-ATP-grasp domain superfamily CFF04554_RS07945 IPR011054 Rudiment single hybrid motif CFF04554_RS07945 IPR011764 Biotin carboxylation domain CFF04554_RS07950 IPR000089 Biotin/lipoyl attachment CFF04554_RS07950 IPR011053 Single hybrid motif CFF04554_RS07950 IPR001249 Acetyl-CoA biotin carboxyl carrier CFF04554_RS07950 IPR001882 Biotin-binding site CFF04554_RS07955 IPR033704 dUTPase, trimeric CFF04554_RS07955 IPR036157 dUTPase-like superfamily CFF04554_RS07955 IPR029054 dUTPase-like CFF04554_RS07955 IPR011962 dCTP deaminase CFF04554_RS07960 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS07960 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS07960 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase CFF04554_RS07960 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS07960 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS07970 IPR000304 Pyrroline-5-carboxylate reductase CFF04554_RS07970 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CFF04554_RS07970 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS07970 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CFF04554_RS07970 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CFF04554_RS07980 IPR034505 Anaerobic coproporphyrinogen-III oxidase CFF04554_RS07980 IPR006638 Elp3/MiaB/NifB CFF04554_RS07980 IPR010723 HemN, C-terminal CFF04554_RS07980 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS07980 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN CFF04554_RS07980 IPR007197 Radical SAM CFF04554_RS07985 IPR019724 Uncharacterised protein family UPF0763 CFF04554_RS07990 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CFF04554_RS07990 IPR006130 Aspartate/ornithine carbamoyltransferase CFF04554_RS07990 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CFF04554_RS07990 IPR002292 Ornithine/putrescine carbamoyltransferase CFF04554_RS07990 IPR024904 Ornithine carbamoyltransferase CFF04554_RS07990 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CFF04554_RS07995 IPR013785 Aldolase-type TIM barrel CFF04554_RS07995 IPR030656 Delta-aminolevulinic acid dehydratase, active site CFF04554_RS07995 IPR001731 Delta-aminolevulinic acid dehydratase CFF04554_RS08000 IPR036144 RibA-like superfamily CFF04554_RS08000 IPR000926 GTP cyclohydrolase II, RibA CFF04554_RS08000 IPR032677 GTP cyclohydrolase II CFF04554_RS08005 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08005 IPR003682 rRNA small subunit methyltransferase G CFF04554_RS08020 IPR001915 Peptidase M48 CFF04554_RS08020 IPR022919 Peptidase M48, protease HtpX, putative CFF04554_RS08025 IPR001608 Alanine racemase, N-terminal CFF04554_RS08025 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CFF04554_RS08025 IPR011079 Alanine racemase, C-terminal CFF04554_RS08025 IPR029066 PLP-binding barrel CFF04554_RS08025 IPR000821 Alanine racemase CFF04554_RS08025 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CFF04554_RS08065 IPR029061 Thiamin diphosphate-binding fold CFF04554_RS08065 IPR005474 Transketolase, N-terminal CFF04554_RS08105 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS08105 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS08105 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CFF04554_RS08105 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS08110 IPR005793 Formyl transferase, C-terminal CFF04554_RS08110 IPR037022 Formyl transferase, C-terminal domain superfamily CFF04554_RS08110 IPR005794 Methionyl-tRNA formyltransferase CFF04554_RS08110 IPR002376 Formyl transferase, N-terminal CFF04554_RS08110 IPR036477 Formyl transferase, N-terminal domain superfamily CFF04554_RS08110 IPR011034 Formyl transferase-like, C-terminal domain superfamily CFF04554_RS08110 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CFF04554_RS08110 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CFF04554_RS08115 IPR011004 Trimeric LpxA-like superfamily CFF04554_RS08115 IPR024688 Maltose/galactoside acetyltransferase CFF04554_RS08115 IPR039369 Galactoside O-acetyltransferase LacA-like CFF04554_RS08115 IPR001451 Hexapeptide repeat CFF04554_RS08130 IPR011910 ADP-heptose--LPS heptosyltransferase 2 CFF04554_RS08130 IPR002201 Glycosyl transferase, family 9 CFF04554_RS08145 IPR017932 Glutamine amidotransferase type 2 domain CFF04554_RS08145 IPR001962 Asparagine synthase CFF04554_RS08145 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS08145 IPR033738 Asparagine synthase, N-terminal domain CFF04554_RS08145 IPR006426 Asparagine synthase, glutamine-hydrolyzing CFF04554_RS08150 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CFF04554_RS08150 IPR001296 Glycosyl transferase, family 1 CFF04554_RS08170 IPR001296 Glycosyl transferase, family 1 CFF04554_RS08175 IPR006426 Asparagine synthase, glutamine-hydrolyzing CFF04554_RS08175 IPR017932 Glutamine amidotransferase type 2 domain CFF04554_RS08175 IPR029055 Nucleophile aminohydrolases, N-terminal CFF04554_RS08175 IPR033738 Asparagine synthase, N-terminal domain CFF04554_RS08175 IPR001962 Asparagine synthase CFF04554_RS08225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08225 IPR002891 Adenylyl-sulfate kinase CFF04554_RS08235 IPR023553 Uncharacterised methyltransferase, YrrT CFF04554_RS08235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08235 IPR041698 Methyltransferase domain 25 CFF04554_RS08240 IPR008279 PEP-utilising enzyme, mobile domain CFF04554_RS08240 IPR036637 Phosphohistidine domain superfamily CFF04554_RS08240 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CFF04554_RS08240 IPR013815 ATP-grasp fold, subdomain 1 CFF04554_RS08245 IPR017926 Glutamine amidotransferase CFF04554_RS08245 IPR022955 GMP synthase CFF04554_RS08245 IPR025777 GMP synthetase ATP pyrophosphatase domain CFF04554_RS08245 IPR022310 NAD/GMP synthase CFF04554_RS08245 IPR004739 GMP synthase, glutamine amidotransferase CFF04554_RS08245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CFF04554_RS08245 IPR001674 GMP synthase, C-terminal CFF04554_RS08245 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS08250 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS08250 IPR005835 Nucleotidyl transferase domain CFF04554_RS08255 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CFF04554_RS08255 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) CFF04554_RS08255 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS08260 IPR020036 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase CFF04554_RS08260 IPR016181 Acyl-CoA N-acyltransferase CFF04554_RS08260 IPR000182 GNAT domain CFF04554_RS08265 IPR010810 Flagellin hook, IN motif CFF04554_RS08265 IPR001492 Flagellin CFF04554_RS08265 IPR001029 Flagellin, D0/D1 domain CFF04554_RS08270 IPR001029 Flagellin, D0/D1 domain CFF04554_RS08270 IPR001492 Flagellin CFF04554_RS08270 IPR010810 Flagellin hook, IN motif CFF04554_RS08275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS08275 IPR025714 Methyltransferase domain CFF04554_RS08290 IPR002549 Transmembrane protein TqsA-like CFF04554_RS08295 IPR003445 Cation transporter CFF04554_RS08295 IPR004772 TrkH potassium transport family CFF04554_RS08300 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS08300 IPR006037 Regulator of K+ conductance, C-terminal CFF04554_RS08300 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CFF04554_RS08300 IPR003148 Regulator of K+ conductance, N-terminal CFF04554_RS08305 IPR024083 Fumarase/histidase, N-terminal CFF04554_RS08305 IPR018951 Fumarase C, C-terminal CFF04554_RS08305 IPR000362 Fumarate lyase family CFF04554_RS08305 IPR020557 Fumarate lyase, conserved site CFF04554_RS08305 IPR022761 Fumarate lyase, N-terminal CFF04554_RS08305 IPR008948 L-Aspartase-like CFF04554_RS08305 IPR004708 Aspartate ammonia-lyase CFF04554_RS08310 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CFF04554_RS08325 IPR012910 TonB-dependent receptor, plug domain CFF04554_RS08325 IPR039426 Vitamin B12 transporter BtuB-like CFF04554_RS08325 IPR037066 TonB-dependent receptor, plug domain superfamily CFF04554_RS08325 IPR000531 TonB-dependent receptor-like, beta-barrel CFF04554_RS08325 IPR010917 TonB-dependent receptor, conserved site CFF04554_RS08325 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFF04554_RS08325 IPR010916 TonB box, conserved site CFF04554_RS08330 IPR014172 TonB-system energizer ExbB type-2 CFF04554_RS08330 IPR002898 MotA/TolQ/ExbB proton channel CFF04554_RS08335 IPR003400 Biopolymer transport protein ExbD/TolR CFF04554_RS08335 IPR014171 TonB system transport protein ExbD type-2 CFF04554_RS08340 IPR037682 TonB, C-terminal CFF04554_RS08340 IPR006260 TonB/TolA, C-terminal CFF04554_RS08345 IPR000914 Solute-binding protein family 5 domain CFF04554_RS08345 IPR023765 Solute-binding protein family 5, conserved site CFF04554_RS08345 IPR039424 Solute-binding protein family 5 CFF04554_RS08345 IPR030678 Peptide/nickel binding protein, MppA-type CFF04554_RS08345 IPR011980 Nickel ABC transporter, substrate-binding protein NikA CFF04554_RS08350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFF04554_RS08350 IPR035906 MetI-like superfamily CFF04554_RS08355 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CFF04554_RS08355 IPR035906 MetI-like superfamily CFF04554_RS08355 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CFF04554_RS08360 IPR003439 ABC transporter-like CFF04554_RS08360 IPR003593 AAA+ ATPase domain CFF04554_RS08360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08360 IPR017871 ABC transporter, conserved site CFF04554_RS08360 IPR015858 ABC transporter, nickel import, NikE CFF04554_RS08360 IPR014137 Nickel import ATP-binding protein NikE CFF04554_RS08365 IPR003593 AAA+ ATPase domain CFF04554_RS08365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08365 IPR017871 ABC transporter, conserved site CFF04554_RS08365 IPR015858 ABC transporter, nickel import, NikE CFF04554_RS08365 IPR014137 Nickel import ATP-binding protein NikE CFF04554_RS08365 IPR003439 ABC transporter-like CFF04554_RS08380 IPR020913 Uncharacterised protein family UPF0323 CFF04554_RS08390 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CFF04554_RS08390 IPR016185 Pre-ATP-grasp domain superfamily CFF04554_RS08395 IPR003382 Flavoprotein CFF04554_RS08395 IPR004507 Flavin prenyltransferase UbiX-like CFF04554_RS08395 IPR036551 Flavin prenyltransferase-like CFF04554_RS08400 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS08400 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CFF04554_RS08400 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CFF04554_RS08400 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CFF04554_RS08405 IPR007551 Protein of unknown function DUF520 CFF04554_RS08405 IPR035571 UPF0234-like, C-terminal CFF04554_RS08405 IPR035570 UPF0234, N-terminal CFF04554_RS08405 IPR036183 YajQ-like superfamily CFF04554_RS08410 IPR028588 Thiol:disulfide interchange protein DsbL CFF04554_RS08410 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CFF04554_RS08410 IPR001853 DSBA-like thioredoxin domain CFF04554_RS08410 IPR036249 Thioredoxin-like superfamily CFF04554_RS08410 IPR013766 Thioredoxin domain CFF04554_RS08415 IPR023404 Radical SAM, alpha/beta horseshoe CFF04554_RS08415 IPR034505 Anaerobic coproporphyrinogen-III oxidase CFF04554_RS08415 IPR006638 Elp3/MiaB/NifB CFF04554_RS08415 IPR010723 HemN, C-terminal CFF04554_RS08415 IPR004559 Heme chaperone HemW-like CFF04554_RS08415 IPR007197 Radical SAM CFF04554_RS08420 IPR037219 Peptidase M41-like CFF04554_RS08420 IPR000642 Peptidase M41 CFF04554_RS08420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08420 IPR005936 Peptidase, FtsH CFF04554_RS08420 IPR003960 ATPase, AAA-type, conserved site CFF04554_RS08420 IPR003959 ATPase, AAA-type, core CFF04554_RS08420 IPR041569 AAA ATPase, AAA+ lid domain CFF04554_RS08420 IPR003593 AAA+ ATPase domain CFF04554_RS08425 IPR042099 AMP-dependent synthetase-like superfamily CFF04554_RS08425 IPR000873 AMP-dependent synthetase/ligase CFF04554_RS08425 IPR020845 AMP-binding, conserved site CFF04554_RS08425 IPR020459 AMP-binding CFF04554_RS08425 IPR025110 AMP-binding enzyme, C-terminal domain CFF04554_RS08435 IPR018246 AP endonuclease 2, zinc binding site CFF04554_RS08435 IPR036237 Xylose isomerase-like superfamily CFF04554_RS08435 IPR013022 Xylose isomerase-like, TIM barrel domain CFF04554_RS08435 IPR001719 AP endonuclease 2 CFF04554_RS08510 IPR005496 Integral membrane protein TerC CFF04554_RS08515 IPR004607 Phosphoribosylglycinamide formyltransferase CFF04554_RS08515 IPR036477 Formyl transferase, N-terminal domain superfamily CFF04554_RS08515 IPR002376 Formyl transferase, N-terminal CFF04554_RS08520 IPR036652 YjeF N-terminal domain superfamily CFF04554_RS08520 IPR004443 YjeF N-terminal domain CFF04554_RS08520 IPR029056 Ribokinase-like CFF04554_RS08520 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr CFF04554_RS08520 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CFF04554_RS08520 IPR017953 Carbohydrate kinase, predicted, conserved site CFF04554_RS08525 IPR000523 Magnesium chelatase ChlI domain CFF04554_RS08525 IPR020568 Ribosomal protein S5 domain 2-type fold CFF04554_RS08525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CFF04554_RS08525 IPR003593 AAA+ ATPase domain CFF04554_RS08525 IPR001208 MCM domain CFF04554_RS08525 IPR004482 Mg chelatase-related protein CFF04554_RS08525 IPR025158 Mg chelatase-related protein, C-terminal domain CFF04554_RS08525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08530 IPR036821 Peptide deformylase superfamily CFF04554_RS08530 IPR023635 Peptide deformylase CFF04554_RS08540 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CFF04554_RS08540 IPR018215 ClpP, Ser active site CFF04554_RS08540 IPR033135 ClpP, histidine active site CFF04554_RS08540 IPR029045 ClpP/crotonase-like domain superfamily CFF04554_RS08540 IPR001907 ATP-dependent Clp protease proteolytic subunit CFF04554_RS08545 IPR027304 Trigger factor/SurA domain superfamily CFF04554_RS08545 IPR037041 Trigger factor, C-terminal domain superfamily CFF04554_RS08545 IPR036611 Trigger factor ribosome-binding domain superfamily CFF04554_RS08545 IPR008880 Trigger factor, C-terminal CFF04554_RS08545 IPR008881 Trigger factor, ribosome-binding, bacterial CFF04554_RS08545 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CFF04554_RS08545 IPR005215 Trigger factor CFF04554_RS08550 IPR001474 GTP cyclohydrolase I CFF04554_RS08550 IPR018234 GTP cyclohydrolase I, conserved site CFF04554_RS08550 IPR020602 GTP cyclohydrolase I domain CFF04554_RS08555 IPR040627 T3SS EscN ATPase, C-terminal CFF04554_RS08555 IPR003593 AAA+ ATPase domain CFF04554_RS08555 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CFF04554_RS08555 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08555 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CFF04554_RS08555 IPR032463 ATPase, type III secretion system, FliI CFF04554_RS08555 IPR005714 ATPase, type III secretion system, FliI/YscN CFF04554_RS08560 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CFF04554_RS08560 IPR016454 Cysteine desulfurase CFF04554_RS08560 IPR000192 Aminotransferase class V domain CFF04554_RS08560 IPR017773 Cysteine desulfurase NifS, proteobacteria CFF04554_RS08560 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CFF04554_RS08560 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CFF04554_RS08560 IPR015424 Pyridoxal phosphate-dependent transferase CFF04554_RS08560 IPR010240 Cysteine desulfurase IscS CFF04554_RS08565 IPR010238 NIF system FeS cluster assembly, NifU CFF04554_RS08565 IPR016217 Nitrogen fixation, NifU CFF04554_RS08565 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CFF04554_RS08565 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CFF04554_RS08565 IPR007419 BFD-like [2Fe-2S]-binding domain CFF04554_RS08565 IPR034904 Fe-S cluster assembly domain superfamily CFF04554_RS08565 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CFF04554_RS08585 IPR019815 Translation initiation factor 3, C-terminal CFF04554_RS08585 IPR019814 Translation initiation factor 3, N-terminal CFF04554_RS08585 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CFF04554_RS08585 IPR019813 Translation initiation factor 3, conserved site CFF04554_RS08585 IPR001288 Translation initiation factor 3 CFF04554_RS08585 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CFF04554_RS08590 IPR004154 Anticodon-binding CFF04554_RS08590 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CFF04554_RS08590 IPR033728 Threonine-tRNA ligase catalytic core domain CFF04554_RS08590 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CFF04554_RS08590 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CFF04554_RS08590 IPR002320 Threonine-tRNA ligase, class IIa CFF04554_RS08590 IPR006195 Aminoacyl-tRNA synthetase, class II CFF04554_RS08590 IPR036621 Anticodon-binding domain superfamily CFF04554_RS08640 IPR005265 Protoporphyrinogen oxidase HemJ-like CFF04554_RS08650 IPR001872 Peptidase A8, signal peptidase II CFF04554_RS08655 IPR005843 Alpha-D-phosphohexomutase, C-terminal CFF04554_RS08655 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CFF04554_RS08655 IPR006352 Phosphoglucosamine mutase, bacterial type CFF04554_RS08655 IPR016066 Alpha-D-phosphohexomutase, conserved site CFF04554_RS08655 IPR005841 Alpha-D-phosphohexomutase superfamily CFF04554_RS08655 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CFF04554_RS08655 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CFF04554_RS08655 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CFF04554_RS08655 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CFF04554_RS08660 IPR036510 Ribosomal protein S20 superfamily CFF04554_RS08660 IPR002583 Ribosomal protein S20 CFF04554_RS08665 IPR005139 Peptide chain release factor CFF04554_RS08665 IPR004373 Peptide chain release factor 1 CFF04554_RS08665 IPR000352 Peptide chain release factor class I CFF04554_RS08670 IPR007351 Uncharacterised protein YjbR CFF04554_RS08670 IPR038056 YjbR-like superfamily CFF04554_RS08680 IPR004808 AP endonuclease 1 CFF04554_RS08680 IPR020847 AP endonuclease 1, binding site CFF04554_RS08680 IPR036691 Endonuclease/exonuclease/phosphatase superfamily CFF04554_RS08680 IPR020848 AP endonuclease 1, conserved site CFF04554_RS08680 IPR005135 Endonuclease/exonuclease/phosphatase CFF04554_RS08685 IPR012549 Phosphoethanolamine transferase, N-terminal CFF04554_RS08685 IPR040423 Phosphoethanolamine transferase CFF04554_RS08685 IPR017850 Alkaline-phosphatase-like, core domain superfamily CFF04554_RS08685 IPR000917 Sulfatase, N-terminal CFF04554_RS08690 IPR000829 DAGK family CFF04554_RS08690 IPR033718 Diacylglycerol kinase, prokaryotic CFF04554_RS08690 IPR036945 Diacylglycerol kinase (DAGK) superfamily CFF04554_RS08700 IPR022929 Putative manganese efflux pump MntP CFF04554_RS08700 IPR003810 Putative manganese efflux pump CFF04554_RS08710 IPR001626 ABC transporter, TroCD-like CFF04554_RS08710 IPR037294 ABC transporter, BtuC-like CFF04554_RS08715 IPR003593 AAA+ ATPase domain CFF04554_RS08715 IPR017871 ABC transporter, conserved site CFF04554_RS08715 IPR003439 ABC transporter-like CFF04554_RS08715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08725 IPR012674 Calycin CFF04554_RS08725 IPR015304 ZinT domain CFF04554_RS08735 IPR009056 Cytochrome c-like domain CFF04554_RS08735 IPR036909 Cytochrome c-like domain superfamily CFF04554_RS08735 IPR004852 Di-haem cytochrome c peroxidase CFF04554_RS08735 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase CFF04554_RS08740 IPR007895 MASE1 CFF04554_RS08740 IPR001633 EAL domain CFF04554_RS08740 IPR035919 EAL domain superfamily CFF04554_RS08740 IPR000160 GGDEF domain CFF04554_RS08745 IPR001765 Carbonic anhydrase CFF04554_RS08745 IPR036874 Carbonic anhydrase superfamily CFF04554_RS08745 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CFF04554_RS08750 IPR006685 Mechanosensitive ion channel MscS CFF04554_RS08750 IPR006686 Mechanosensitive ion channel MscS, conserved site CFF04554_RS08750 IPR023408 Mechanosensitive ion channel MscS domain superfamily CFF04554_RS08750 IPR011066 Mechanosensitive ion channel MscS, C-terminal CFF04554_RS08750 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CFF04554_RS08750 IPR010920 LSM domain superfamily CFF04554_RS08765 IPR000453 Chorismate synthase CFF04554_RS08765 IPR035904 Chorismate synthase AroC superfamily CFF04554_RS08765 IPR020541 Chorismate synthase, conserved site CFF04554_RS08770 IPR000999 Ribonuclease III domain CFF04554_RS08770 IPR036389 Ribonuclease III, endonuclease domain superfamily CFF04554_RS08770 IPR011907 Ribonuclease III CFF04554_RS08770 IPR014720 Double-stranded RNA-binding domain CFF04554_RS08775 IPR036397 Ribonuclease H superfamily CFF04554_RS08775 IPR022892 Ribonuclease HI CFF04554_RS08775 IPR012337 Ribonuclease H-like superfamily CFF04554_RS08775 IPR002156 Ribonuclease H domain CFF04554_RS08785 IPR034151 Bacterial DnaG primase, TOPRIM domain CFF04554_RS08785 IPR013264 DNA primase, catalytic core, N-terminal CFF04554_RS08785 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CFF04554_RS08785 IPR006295 DNA primase, DnaG CFF04554_RS08785 IPR036977 DNA Primase, CHC2-type zinc finger CFF04554_RS08785 IPR030846 DNA primase DnaG, bacteria CFF04554_RS08785 IPR006171 TOPRIM domain CFF04554_RS08785 IPR002694 Zinc finger, CHC2-type CFF04554_RS08805 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CFF04554_RS08805 IPR032813 Putative Na+/H+ antiporter, N-terminal CFF04554_RS08815 IPR004299 Membrane bound O-acyl transferase, MBOAT CFF04554_RS08815 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB CFF04554_RS08815 IPR028362 Alginate O-acetyltransferase AlgI CFF04554_RS08820 IPR004404 Dihydroxy-acid dehydratase CFF04554_RS08820 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CFF04554_RS08820 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CFF04554_RS08820 IPR042096 Dihydroxy-acid dehydratase, C-terminal CFF04554_RS08820 IPR037237 IlvD/EDD, N-terminal domain CFF04554_RS08825 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CFF04554_RS08825 IPR006179 5'-Nucleotidase/apyrase CFF04554_RS08825 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CFF04554_RS08825 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS08825 IPR008334 5'-Nucleotidase, C-terminal CFF04554_RS08830 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08830 IPR017926 Glutamine amidotransferase CFF04554_RS08830 IPR017456 CTP synthase, N-terminal CFF04554_RS08830 IPR004468 CTP synthase CFF04554_RS08830 IPR029062 Class I glutamine amidotransferase-like CFF04554_RS08830 IPR033828 CTP synthase GATase domain CFF04554_RS08835 IPR001667 DDH domain CFF04554_RS08835 IPR038763 DHH phosphoesterase superfamily CFF04554_RS08835 IPR003156 DHHA1 domain CFF04554_RS08835 IPR041122 RecJ, OB domain CFF04554_RS08835 IPR004610 Bacterial RecJ exonuclease CFF04554_RS08840 IPR023171 Na/H antiporter domain superfamily CFF04554_RS08840 IPR004670 Na+/H+ antiporter NhaA CFF04554_RS08845 IPR036640 ABC transporter type 1, transmembrane domain superfamily CFF04554_RS08845 IPR003439 ABC transporter-like CFF04554_RS08845 IPR017871 ABC transporter, conserved site CFF04554_RS08845 IPR005898 Cyclic peptide transporter CFF04554_RS08845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08845 IPR003593 AAA+ ATPase domain CFF04554_RS08845 IPR011527 ABC transporter type 1, transmembrane domain CFF04554_RS08850 IPR037119 Haem oxygenase HugZ-like superfamily CFF04554_RS08850 IPR026324 Haem oxygenase, HugZ CFF04554_RS08850 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative CFF04554_RS08850 IPR012349 FMN-binding split barrel CFF04554_RS08850 IPR019595 Domain of unknown function DUF2470 CFF04554_RS08855 IPR000531 TonB-dependent receptor-like, beta-barrel CFF04554_RS08855 IPR037066 TonB-dependent receptor, plug domain superfamily CFF04554_RS08855 IPR012910 TonB-dependent receptor, plug domain CFF04554_RS08855 IPR010105 TonB-dependent siderophore receptor CFF04554_RS08855 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily CFF04554_RS08855 IPR039423 TonB-dependent receptor-like CFF04554_RS08860 IPR000522 ABC transporter, permease protein, BtuC-like CFF04554_RS08860 IPR037294 ABC transporter, BtuC-like CFF04554_RS08865 IPR003593 AAA+ ATPase domain CFF04554_RS08865 IPR003439 ABC transporter-like CFF04554_RS08865 IPR017871 ABC transporter, conserved site CFF04554_RS08865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08870 IPR002491 ABC transporter periplasmic binding domain CFF04554_RS08870 IPR023544 ABC transporter, vitamin B12-binding protein CFF04554_RS08895 IPR020013 Flagellar hook-basal body protein, FlgE/F/G CFF04554_RS08895 IPR001444 Flagellar basal body rod protein, N-terminal CFF04554_RS08895 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like CFF04554_RS08895 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CFF04554_RS08895 IPR037058 Flagellar hook protein FlgE superfamily CFF04554_RS08895 IPR011491 Flagellar hook protein FlgE CFF04554_RS08895 IPR012835 Flagellar hook FlgE CFF04554_RS08895 IPR010810 Flagellin hook, IN motif CFF04554_RS08900 IPR025987 GW domain CFF04554_RS08900 IPR038200 GW domain superfamily CFF04554_RS08900 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CFF04554_RS08905 IPR001653 Diaminopimelate epimerase, DapF CFF04554_RS08905 IPR018510 Diaminopimelate epimerase, active site CFF04554_RS08910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08910 IPR001977 Dephospho-CoA kinase CFF04554_RS08915 IPR006175 YjgF/YER057c/UK114 family CFF04554_RS08915 IPR006056 RidA family CFF04554_RS08915 IPR035959 RutC-like superfamily CFF04554_RS08915 IPR019897 RidA, conserved site CFF04554_RS08920 IPR016188 PurM-like, N-terminal domain CFF04554_RS08920 IPR010918 PurM-like, C-terminal domain CFF04554_RS08920 IPR036676 PurM-like, C-terminal domain superfamily CFF04554_RS08920 IPR036921 PurM-like, N-terminal domain superfamily CFF04554_RS08920 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CFF04554_RS08930 IPR003593 AAA+ ATPase domain CFF04554_RS08930 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CFF04554_RS08930 IPR032423 AAA C-terminal domain CFF04554_RS08930 IPR008824 RuvB-like P-loop domain CFF04554_RS08930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS08930 IPR002589 Macro domain CFF04554_RS08930 IPR021886 MgsA AAA+ ATPase C-terminal CFF04554_RS08935 IPR000620 EamA domain CFF04554_RS08940 IPR013766 Thioredoxin domain CFF04554_RS08940 IPR036249 Thioredoxin-like superfamily CFF04554_RS08940 IPR013740 Redoxin CFF04554_RS08940 IPR002065 Thiol peroxidase Tpx CFF04554_RS08940 IPR018219 Thiol peroxidase conserved site CFF04554_RS08950 IPR023031 Orotate phosphoribosyltransferase CFF04554_RS08950 IPR006273 Orotate phosphoribosyltransferase, bacterial CFF04554_RS08950 IPR000836 Phosphoribosyltransferase domain CFF04554_RS08950 IPR029057 Phosphoribosyltransferase-like CFF04554_RS08955 IPR023584 Ribosome recycling factor domain CFF04554_RS08955 IPR002661 Ribosome recycling factor CFF04554_RS08955 IPR036191 RRF superfamily CFF04554_RS08965 IPR004692 Preprotein translocase SecG subunit CFF04554_RS08970 IPR006214 Bax inhibitor 1-related CFF04554_RS09010 IPR029039 Flavoprotein-like superfamily CFF04554_RS09010 IPR003680 Flavodoxin-like fold CFF04554_RS09030 IPR003669 Thymidylate synthase ThyX CFF04554_RS09030 IPR036098 Thymidylate synthase ThyX superfamily CFF04554_RS09035 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CFF04554_RS09035 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CFF04554_RS09035 IPR036188 FAD/NAD(P)-binding domain superfamily CFF04554_RS09045 IPR032808 DoxX family CFF04554_RS09050 IPR000415 Nitroreductase-like CFF04554_RS09050 IPR033878 Nitroreductase NfsB-like CFF04554_RS09050 IPR029479 Nitroreductase CFF04554_RS09065 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CFF04554_RS09065 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CFF04554_RS09065 IPR002942 RNA-binding S4 domain CFF04554_RS09065 IPR036986 RNA-binding S4 domain superfamily CFF04554_RS09065 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFF04554_RS09065 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CFF04554_RS09065 IPR006145 Pseudouridine synthase, RsuA/RluA CFF04554_RS09070 IPR000644 CBS domain CFF04554_RS09070 IPR001347 Sugar isomerase (SIS) CFF04554_RS09070 IPR035474 KpsF-like, SIS domain CFF04554_RS09070 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CFF04554_RS09075 IPR001587 Ribonuclease J, conserved site CFF04554_RS09075 IPR042173 Ribonuclease J, domain 2 CFF04554_RS09075 IPR041636 Ribonuclease J, C-terminal CFF04554_RS09075 IPR001279 Metallo-beta-lactamase CFF04554_RS09075 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CFF04554_RS09075 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CFF04554_RS09075 IPR004613 Ribonuclease J CFF04554_RS09075 IPR030854 Ribonuclease J, bacteria CFF04554_RS09080 IPR011530 Ribosomal RNA adenine dimethylase CFF04554_RS09080 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CFF04554_RS09080 IPR023165 rRNA adenine dimethylase-like CFF04554_RS09080 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CFF04554_RS09080 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CFF04554_RS09080 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS09085 IPR036259 MFS transporter superfamily CFF04554_RS09085 IPR020846 Major facilitator superfamily domain CFF04554_RS09085 IPR010290 Transmembrane secretion effector CFF04554_RS09090 IPR011060 Ribulose-phosphate binding barrel CFF04554_RS09090 IPR004651 Histidine biosynthesis, HisF CFF04554_RS09090 IPR006062 Histidine biosynthesis CFF04554_RS09090 IPR013785 Aldolase-type TIM barrel CFF04554_RS09100 IPR040072 Methyltransferase (Class A) CFF04554_RS09100 IPR007197 Radical SAM CFF04554_RS09100 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CFF04554_RS09100 IPR027492 Dual-specificity RNA methyltransferase RlmN CFF04554_RS09100 IPR013785 Aldolase-type TIM barrel CFF04554_RS09110 IPR020103 Pseudouridine synthase, catalytic domain superfamily CFF04554_RS09110 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CFF04554_RS09110 IPR006145 Pseudouridine synthase, RsuA/RluA CFF04554_RS09115 IPR000362 Fumarate lyase family CFF04554_RS09115 IPR022761 Fumarate lyase, N-terminal CFF04554_RS09115 IPR008948 L-Aspartase-like CFF04554_RS09115 IPR004769 Adenylosuccinate lyase CFF04554_RS09115 IPR019468 Adenylosuccinate lyase C-terminal CFF04554_RS09115 IPR024083 Fumarase/histidase, N-terminal CFF04554_RS09115 IPR020557 Fumarate lyase, conserved site CFF04554_RS09120 IPR039718 Ribonucleoside-diphosphate reductase large subunit CFF04554_RS09120 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CFF04554_RS09120 IPR013509 Ribonucleotide reductase large subunit, N-terminal CFF04554_RS09120 IPR000788 Ribonucleotide reductase large subunit, C-terminal CFF04554_RS09120 IPR013346 Ribonucleotide reductase, class I , alpha subunit CFF04554_RS09120 IPR005144 ATP-cone domain CFF04554_RS09125 IPR004841 Amino acid permease/ SLC12A domain CFF04554_RS09125 IPR004840 Amino acid permease, conserved site CFF04554_RS09130 IPR012337 Ribonuclease H-like superfamily CFF04554_RS09130 IPR002176 Crossover junction endodeoxyribonuclease RuvC CFF04554_RS09130 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CFF04554_RS09130 IPR036397 Ribonuclease H superfamily CFF04554_RS09140 IPR038454 DnaA, N-terminal domain superfamily CFF04554_RS09140 IPR013159 Chromosomal replication initiator, DnaA C-terminal CFF04554_RS09140 IPR013317 Chromosomal replication initiator protein DnaA CFF04554_RS09140 IPR010921 Trp repressor/replication initiator CFF04554_RS09140 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CFF04554_RS09140 IPR024633 DnaA N-terminal domain CFF04554_RS09140 IPR001957 Chromosomal replication control, initiator DnaA CFF04554_RS09140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS09140 IPR003593 AAA+ ATPase domain CFF04554_RS09140 IPR020591 Chromosomal replication control, initiator DnaA-like CFF04554_RS09305 IPR035965 PAS domain superfamily CFF04554_RS09305 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS09305 IPR000014 PAS domain CFF04554_RS09305 IPR001610 PAC motif CFF04554_RS09305 IPR013655 PAS fold-3 CFF04554_RS09305 IPR000700 PAS-associated, C-terminal CFF04554_RS09305 IPR004090 Chemotaxis methyl-accepting receptor CFF04554_RS09340 IPR028622 ATP-dependent RNA helicase RhlE CFF04554_RS09340 IPR011545 DEAD/DEAH box helicase domain CFF04554_RS09340 IPR014001 Helicase superfamily 1/2, ATP-binding domain CFF04554_RS09340 IPR001650 Helicase, C-terminal CFF04554_RS09340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CFF04554_RS09340 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CFF04554_RS09340 IPR014014 RNA helicase, DEAD-box type, Q motif CFF04554_RS09345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CFF04554_RS09345 IPR018773 Methyltransferase regulatory domain, predicted CFF04554_RS09345 IPR025714 Methyltransferase domain CFF04554_RS09365 IPR014054 Bacteriophage regulatory protein, Rha family CFF04554_RS09365 IPR018877 Bacteriophage P22, Orf201, C-terminal CFF04554_RS09385 IPR001610 PAC motif CFF04554_RS09385 IPR000014 PAS domain CFF04554_RS09385 IPR013655 PAS fold-3 CFF04554_RS09385 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS09385 IPR035965 PAS domain superfamily CFF04554_RS09385 IPR004090 Chemotaxis methyl-accepting receptor CFF04554_RS09385 IPR000700 PAS-associated, C-terminal CFF04554_RS09390 IPR035965 PAS domain superfamily CFF04554_RS09390 IPR004090 Chemotaxis methyl-accepting receptor CFF04554_RS09390 IPR000700 PAS-associated, C-terminal CFF04554_RS09390 IPR013655 PAS fold-3 CFF04554_RS09390 IPR000014 PAS domain CFF04554_RS09390 IPR001610 PAC motif CFF04554_RS09390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS09395 IPR002347 Short-chain dehydrogenase/reductase SDR CFF04554_RS09395 IPR020904 Short-chain dehydrogenase/reductase, conserved site CFF04554_RS09395 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CFF04554_RS09395 IPR036291 NAD(P)-binding domain superfamily CFF04554_RS09405 IPR001173 Glycosyltransferase 2-like CFF04554_RS09405 IPR041038 TarS beta-glycosyltransferase C-terminal domain 1 CFF04554_RS09405 IPR029044 Nucleotide-diphospho-sugar transferases CFF04554_RS09410 IPR035965 PAS domain superfamily CFF04554_RS09410 IPR000700 PAS-associated, C-terminal CFF04554_RS09410 IPR000014 PAS domain CFF04554_RS09410 IPR001610 PAC motif CFF04554_RS09410 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CFF04554_RS09410 IPR013655 PAS fold-3 CFF04554_RS09410 IPR004090 Chemotaxis methyl-accepting receptor CFF04554_RS09415 IPR029052 Metallo-dependent phosphatase-like CFF04554_RS09415 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CFF04554_RS09415 IPR041827 CpdB, N-terminal metallophosphatase domain CFF04554_RS09415 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CFF04554_RS09415 IPR008334 5'-Nucleotidase, C-terminal CFF04554_RS09415 IPR006179 5'-Nucleotidase/apyrase CFF04554_RS09415 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CFF04554_RS09415 IPR006146 5'-Nucleotidase, conserved site