CFF04554_RS00025	PWY-6700	queuosine biosynthesis
CFF04554_RS00100	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS00100	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS00100	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS00105	PWY-5381	pyridine nucleotide cycling (plants)
CFF04554_RS00110	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS00110	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS00110	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS00140	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFF04554_RS00140	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFF04554_RS00140	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFF04554_RS00140	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFF04554_RS00140	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS00140	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS00140	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFF04554_RS00140	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS00155	PWY-6854	ethylene biosynthesis III (microbes)
CFF04554_RS00320	PWY-5155	&beta;-alanine biosynthesis III
CFF04554_RS00345	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFF04554_RS00345	PWY-5723	Rubisco shunt
CFF04554_RS00345	PWY-6891	thiazole biosynthesis II (Bacillus)
CFF04554_RS00345	PWY-6892	thiazole biosynthesis I (E. coli)
CFF04554_RS00345	PWY-6901	superpathway of glucose and xylose degradation
CFF04554_RS00345	PWY-7560	methylerythritol phosphate pathway II
CFF04554_RS00375	PWY-6891	thiazole biosynthesis II (Bacillus)
CFF04554_RS00375	PWY-6892	thiazole biosynthesis I (E. coli)
CFF04554_RS00380	PWY-6892	thiazole biosynthesis I (E. coli)
CFF04554_RS00380	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CFF04554_RS00390	PWY-3801	sucrose degradation II (sucrose synthase)
CFF04554_RS00390	PWY-6527	stachyose degradation
CFF04554_RS00390	PWY-7238	sucrose biosynthesis II
CFF04554_RS00390	PWY-7343	UDP-glucose biosynthesis
CFF04554_RS00395	PWY-3801	sucrose degradation II (sucrose synthase)
CFF04554_RS00395	PWY-5054	sorbitol biosynthesis I
CFF04554_RS00395	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CFF04554_RS00395	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CFF04554_RS00395	PWY-5659	GDP-mannose biosynthesis
CFF04554_RS00395	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFF04554_RS00395	PWY-621	sucrose degradation III (sucrose invertase)
CFF04554_RS00395	PWY-622	starch biosynthesis
CFF04554_RS00395	PWY-6981	chitin biosynthesis
CFF04554_RS00395	PWY-6992	1,5-anhydrofructose degradation
CFF04554_RS00395	PWY-7238	sucrose biosynthesis II
CFF04554_RS00395	PWY-7347	sucrose biosynthesis III
CFF04554_RS00395	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFF04554_RS00415	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CFF04554_RS00440	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CFF04554_RS00440	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CFF04554_RS00440	PWY-6896	thiamin salvage I
CFF04554_RS00440	PWY-6897	thiamin salvage II
CFF04554_RS00475	PWY-6825	phosphatidylcholine biosynthesis V
CFF04554_RS00510	PWY-6749	CMP-legionaminate biosynthesis I
CFF04554_RS00515	PWY-5659	GDP-mannose biosynthesis
CFF04554_RS00515	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
CFF04554_RS00520	PWY-6703	preQ<sub>0</sub> biosynthesis
CFF04554_RS00525	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFF04554_RS00560	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CFF04554_RS00560	PWY-6153	autoinducer AI-2 biosynthesis I
CFF04554_RS00560	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CFF04554_RS00880	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CFF04554_RS00945	PWY-6823	molybdenum cofactor biosynthesis
CFF04554_RS00960	PWY-6823	molybdenum cofactor biosynthesis
CFF04554_RS00985	PWY-6803	phosphatidylcholine acyl editing
CFF04554_RS00985	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CFF04554_RS00985	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CFF04554_RS00985	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CFF04554_RS01000	PWY-1042	glycolysis IV (plant cytosol)
CFF04554_RS01000	PWY-1622	formaldehyde assimilation I (serine pathway)
CFF04554_RS01000	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFF04554_RS01000	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFF04554_RS01000	PWY-5723	Rubisco shunt
CFF04554_RS01000	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFF04554_RS01000	PWY-6886	1-butanol autotrophic biosynthesis
CFF04554_RS01000	PWY-6901	superpathway of glucose and xylose degradation
CFF04554_RS01000	PWY-7003	glycerol degradation to butanol
CFF04554_RS01000	PWY-7124	ethylene biosynthesis V (engineered)
CFF04554_RS01000	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFF04554_RS01020	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFF04554_RS01020	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFF04554_RS01040	PWY-5667	CDP-diacylglycerol biosynthesis I
CFF04554_RS01040	PWY-5981	CDP-diacylglycerol biosynthesis III
CFF04554_RS01045	PWY-7294	xylose degradation IV
CFF04554_RS01045	PWY-7295	L-arabinose degradation IV
CFF04554_RS01045	PWY-7560	methylerythritol phosphate pathway II
CFF04554_RS01070	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CFF04554_RS01070	PWY-5368	dimorphecolate biosynthesis
CFF04554_RS01070	PWY-5995	linoleate biosynthesis I (plants)
CFF04554_RS01070	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CFF04554_RS01070	PWY-6803	phosphatidylcholine acyl editing
CFF04554_RS01070	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CFF04554_RS01070	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CFF04554_RS01070	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CFF04554_RS01070	PWY-7470	phosphatidylcholine biosynthesis VII
CFF04554_RS01070	PWY-7618	ricinoleate biosynthesis
CFF04554_RS01080	PWY-2781	<i>cis</i>-zeatin biosynthesis
CFF04554_RS01100	PWY-6823	molybdenum cofactor biosynthesis
CFF04554_RS01105	PWY-6703	preQ<sub>0</sub> biosynthesis
CFF04554_RS01130	PWY-2201	folate transformations I
CFF04554_RS01160	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFF04554_RS01160	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CFF04554_RS01160	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFF04554_RS01160	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS01160	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CFF04554_RS01160	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFF04554_RS01160	PWY-7205	CMP phosphorylation
CFF04554_RS01160	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFF04554_RS01160	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS01160	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS01160	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS01160	PWY-7224	purine deoxyribonucleosides salvage
CFF04554_RS01160	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFF04554_RS01160	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS01180	PWY-4381	fatty acid biosynthesis initiation I
CFF04554_RS01200	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CFF04554_RS01200	PWY-6148	tetrahydromethanopterin biosynthesis
CFF04554_RS01200	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CFF04554_RS01200	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CFF04554_RS01245	PWY-6825	phosphatidylcholine biosynthesis V
CFF04554_RS01250	PWY-4381	fatty acid biosynthesis initiation I
CFF04554_RS01250	PWY-5743	3-hydroxypropanoate cycle
CFF04554_RS01250	PWY-5744	glyoxylate assimilation
CFF04554_RS01250	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CFF04554_RS01250	PWY-6679	jadomycin biosynthesis
CFF04554_RS01250	PWY-6722	candicidin biosynthesis
CFF04554_RS01250	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFF04554_RS01275	PWY-5839	menaquinol-7 biosynthesis
CFF04554_RS01275	PWY-5844	menaquinol-9 biosynthesis
CFF04554_RS01275	PWY-5849	menaquinol-6 biosynthesis
CFF04554_RS01275	PWY-5890	menaquinol-10 biosynthesis
CFF04554_RS01275	PWY-5891	menaquinol-11 biosynthesis
CFF04554_RS01275	PWY-5892	menaquinol-12 biosynthesis
CFF04554_RS01275	PWY-5895	menaquinol-13 biosynthesis
CFF04554_RS01315	PWY-6891	thiazole biosynthesis II (Bacillus)
CFF04554_RS01315	PWY-6892	thiazole biosynthesis I (E. coli)
CFF04554_RS01315	PWY-7560	methylerythritol phosphate pathway II
CFF04554_RS01340	PWY-3461	L-tyrosine biosynthesis II
CFF04554_RS01340	PWY-3462	L-phenylalanine biosynthesis II
CFF04554_RS01340	PWY-6120	L-tyrosine biosynthesis III
CFF04554_RS01340	PWY-6627	salinosporamide A biosynthesis
CFF04554_RS01340	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CFF04554_RS01340	PWY-7626	bacilysin biosynthesis
CFF04554_RS01350	PWY-2941	L-lysine biosynthesis II
CFF04554_RS01350	PWY-2942	L-lysine biosynthesis III
CFF04554_RS01350	PWY-5097	L-lysine biosynthesis VI
CFF04554_RS01365	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
CFF04554_RS01435	PWY-2201	folate transformations I
CFF04554_RS01485	PWY-2941	L-lysine biosynthesis II
CFF04554_RS01485	PWY-2942	L-lysine biosynthesis III
CFF04554_RS01485	PWY-5097	L-lysine biosynthesis VI
CFF04554_RS01490	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFF04554_RS01490	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFF04554_RS01490	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFF04554_RS01490	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CFF04554_RS01515	PWY-5057	L-valine degradation II
CFF04554_RS01515	PWY-5076	L-leucine degradation III
CFF04554_RS01515	PWY-5078	L-isoleucine degradation II
CFF04554_RS01515	PWY-5101	L-isoleucine biosynthesis II
CFF04554_RS01515	PWY-5103	L-isoleucine biosynthesis III
CFF04554_RS01515	PWY-5104	L-isoleucine biosynthesis IV
CFF04554_RS01515	PWY-5108	L-isoleucine biosynthesis V
CFF04554_RS01570	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CFF04554_RS01570	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CFF04554_RS01570	PWY-5989	stearate biosynthesis II (bacteria and plants)
CFF04554_RS01570	PWY-5994	palmitate biosynthesis I (animals and fungi)
CFF04554_RS01570	PWY-6113	superpathway of mycolate biosynthesis
CFF04554_RS01570	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CFF04554_RS01570	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CFF04554_RS01570	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFF04554_RS01570	PWY-7663	gondoate biosynthesis (anaerobic)
CFF04554_RS01570	PWY-7664	oleate biosynthesis IV (anaerobic)
CFF04554_RS01570	PWYG-321	mycolate biosynthesis
CFF04554_RS01595	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFF04554_RS01595	PWY-5686	UMP biosynthesis
CFF04554_RS01595	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFF04554_RS01610	PWY-5381	pyridine nucleotide cycling (plants)
CFF04554_RS01635	PWY-5381	pyridine nucleotide cycling (plants)
CFF04554_RS01635	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CFF04554_RS01635	PWY-6596	adenosine nucleotides degradation I
CFF04554_RS01635	PWY-6606	guanosine nucleotides degradation II
CFF04554_RS01635	PWY-6607	guanosine nucleotides degradation I
CFF04554_RS01635	PWY-6608	guanosine nucleotides degradation III
CFF04554_RS01635	PWY-7185	UTP and CTP dephosphorylation I
CFF04554_RS01640	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CFF04554_RS01640	PWY-622	starch biosynthesis
CFF04554_RS01650	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFF04554_RS01650	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFF04554_RS01680	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFF04554_RS01680	PWY-5723	Rubisco shunt
CFF04554_RS01695	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CFF04554_RS01700	PWY-6562	norspermidine biosynthesis
CFF04554_RS01710	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CFF04554_RS01755	PWY-5958	acridone alkaloid biosynthesis
CFF04554_RS01755	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CFF04554_RS01755	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CFF04554_RS01760	PWY-5958	acridone alkaloid biosynthesis
CFF04554_RS01760	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CFF04554_RS01760	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CFF04554_RS01855	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS01875	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFF04554_RS01875	PWY-5686	UMP biosynthesis
CFF04554_RS01875	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFF04554_RS01895	PWY-3781	aerobic respiration I (cytochrome c)
CFF04554_RS01895	PWY-4521	arsenite oxidation I (respiratory)
CFF04554_RS01895	PWY-6692	Fe(II) oxidation
CFF04554_RS01895	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFF04554_RS01900	PWY-3781	aerobic respiration I (cytochrome c)
CFF04554_RS01900	PWY-4521	arsenite oxidation I (respiratory)
CFF04554_RS01900	PWY-6692	Fe(II) oxidation
CFF04554_RS01900	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFF04554_RS02035	PWY-5269	cardiolipin biosynthesis II
CFF04554_RS02035	PWY-5668	cardiolipin biosynthesis I
CFF04554_RS02040	PWY-5278	sulfite oxidation III
CFF04554_RS02040	PWY-5340	sulfate activation for sulfonation
CFF04554_RS02040	PWY-6683	sulfate reduction III (assimilatory)
CFF04554_RS02040	PWY-6932	selenate reduction
CFF04554_RS02050	PWY-7560	methylerythritol phosphate pathway II
CFF04554_RS02055	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
CFF04554_RS02075	PWY-3781	aerobic respiration I (cytochrome c)
CFF04554_RS02075	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CFF04554_RS02075	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFF04554_RS02075	PWY-5690	TCA cycle II (plants and fungi)
CFF04554_RS02075	PWY-6728	methylaspartate cycle
CFF04554_RS02075	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFF04554_RS02075	PWY-7254	TCA cycle VII (acetate-producers)
CFF04554_RS02075	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFF04554_RS02080	PWY-3781	aerobic respiration I (cytochrome c)
CFF04554_RS02080	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CFF04554_RS02080	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFF04554_RS02080	PWY-5690	TCA cycle II (plants and fungi)
CFF04554_RS02080	PWY-6728	methylaspartate cycle
CFF04554_RS02080	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFF04554_RS02080	PWY-7254	TCA cycle VII (acetate-producers)
CFF04554_RS02080	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFF04554_RS02370	PWY-6654	phosphopantothenate biosynthesis III
CFF04554_RS02425	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
CFF04554_RS02425	PWY-5739	GDP-D-perosamine biosynthesis
CFF04554_RS02425	PWY-5740	GDP-L-colitose biosynthesis
CFF04554_RS02425	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
CFF04554_RS02425	PWY-7573	GDP-mycosamine biosynthesis
CFF04554_RS02540	PWY-1042	glycolysis IV (plant cytosol)
CFF04554_RS02540	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFF04554_RS02540	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFF04554_RS02540	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFF04554_RS02540	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFF04554_RS02625	PWY-43	putrescine biosynthesis II
CFF04554_RS02760	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFF04554_RS02760	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFF04554_RS02760	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFF04554_RS02770	PWY-6123	inosine-5'-phosphate biosynthesis I
CFF04554_RS02770	PWY-6124	inosine-5'-phosphate biosynthesis II
CFF04554_RS02770	PWY-7234	inosine-5'-phosphate biosynthesis III
CFF04554_RS02815	PWY-2201	folate transformations I
CFF04554_RS02895	PWY-5198	factor 420 biosynthesis
CFF04554_RS02895	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CFF04554_RS02895	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CFF04554_RS02905	PWY-6749	CMP-legionaminate biosynthesis I
CFF04554_RS02920	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFF04554_RS02920	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFF04554_RS02925	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
CFF04554_RS02925	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
CFF04554_RS02925	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
CFF04554_RS02925	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
CFF04554_RS02925	PWY-6978	plastoquinol-9 biosynthesis II
CFF04554_RS03025	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CFF04554_RS03030	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CFF04554_RS03030	PWY-6596	adenosine nucleotides degradation I
CFF04554_RS03030	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS03035	PWY-5344	L-homocysteine biosynthesis
CFF04554_RS03050	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFF04554_RS03050	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFF04554_RS03110	PWY-7254	TCA cycle VII (acetate-producers)
CFF04554_RS03120	PWY-1042	glycolysis IV (plant cytosol)
CFF04554_RS03120	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFF04554_RS03120	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFF04554_RS03120	PWY-5723	Rubisco shunt
CFF04554_RS03120	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFF04554_RS03120	PWY-6886	1-butanol autotrophic biosynthesis
CFF04554_RS03120	PWY-6901	superpathway of glucose and xylose degradation
CFF04554_RS03120	PWY-7003	glycerol degradation to butanol
CFF04554_RS03120	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFF04554_RS03120	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFF04554_RS03135	PWY-6164	3-dehydroquinate biosynthesis I
CFF04554_RS03140	PWY-3341	L-proline biosynthesis III
CFF04554_RS03140	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CFF04554_RS03345	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CFF04554_RS03425	PWY-7294	xylose degradation IV
CFF04554_RS03425	PWY-7295	L-arabinose degradation IV
CFF04554_RS03460	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFF04554_RS03475	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFF04554_RS03475	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CFF04554_RS03580	PWY-7560	methylerythritol phosphate pathway II
CFF04554_RS03620	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CFF04554_RS03620	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CFF04554_RS03685	PWY-2161	folate polyglutamylation
CFF04554_RS03780	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CFF04554_RS03780	PWY-5667	CDP-diacylglycerol biosynthesis I
CFF04554_RS03780	PWY-6453	stigma estolide biosynthesis
CFF04554_RS03780	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CFF04554_RS03780	PWY-7587	oleate biosynthesis III (cyanobacteria)
CFF04554_RS03800	PWY-5316	nicotine biosynthesis
CFF04554_RS03800	PWY-7342	superpathway of nicotine biosynthesis
CFF04554_RS03880	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CFF04554_RS03880	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CFF04554_RS03880	PWY-6897	thiamin salvage II
CFF04554_RS03880	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CFF04554_RS03880	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CFF04554_RS03880	PWY-7356	thiamin salvage IV (yeast)
CFF04554_RS03880	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFF04554_RS03890	PWY-5667	CDP-diacylglycerol biosynthesis I
CFF04554_RS03890	PWY-5981	CDP-diacylglycerol biosynthesis III
CFF04554_RS03925	PWY-5269	cardiolipin biosynthesis II
CFF04554_RS03925	PWY-5668	cardiolipin biosynthesis I
CFF04554_RS03935	PWY-2941	L-lysine biosynthesis II
CFF04554_RS03935	PWY-2942	L-lysine biosynthesis III
CFF04554_RS03935	PWY-5097	L-lysine biosynthesis VI
CFF04554_RS03945	PWY-5686	UMP biosynthesis
CFF04554_RS03985	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFF04554_RS04015	PWY-5674	nitrate reduction IV (dissimilatory)
CFF04554_RS04020	PWY-5198	factor 420 biosynthesis
CFF04554_RS04020	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CFF04554_RS04020	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CFF04554_RS04055	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFF04554_RS04055	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFF04554_RS04070	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFF04554_RS04070	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFF04554_RS04075	PWY-5482	pyruvate fermentation to acetate II
CFF04554_RS04075	PWY-5485	pyruvate fermentation to acetate IV
CFF04554_RS04075	PWY-5497	purine nucleobases degradation II (anaerobic)
CFF04554_RS04080	PWY-1281	sulfoacetaldehyde degradation I
CFF04554_RS04080	PWY-5482	pyruvate fermentation to acetate II
CFF04554_RS04080	PWY-5485	pyruvate fermentation to acetate IV
CFF04554_RS04080	PWY-5497	purine nucleobases degradation II (anaerobic)
CFF04554_RS04080	PWY-6637	sulfolactate degradation II
CFF04554_RS04095	PWY-5101	L-isoleucine biosynthesis II
CFF04554_RS04095	PWY-5103	L-isoleucine biosynthesis III
CFF04554_RS04095	PWY-5104	L-isoleucine biosynthesis IV
CFF04554_RS04095	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CFF04554_RS04095	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CFF04554_RS04095	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CFF04554_RS04095	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFF04554_RS04100	PWY-5101	L-isoleucine biosynthesis II
CFF04554_RS04100	PWY-5103	L-isoleucine biosynthesis III
CFF04554_RS04100	PWY-5104	L-isoleucine biosynthesis IV
CFF04554_RS04100	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CFF04554_RS04100	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CFF04554_RS04100	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CFF04554_RS04100	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFF04554_RS04120	PWY-5316	nicotine biosynthesis
CFF04554_RS04120	PWY-5381	pyridine nucleotide cycling (plants)
CFF04554_RS04120	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CFF04554_RS04120	PWY-7342	superpathway of nicotine biosynthesis
CFF04554_RS04125	PWY-2201	folate transformations I
CFF04554_RS04125	PWY-5497	purine nucleobases degradation II (anaerobic)
CFF04554_RS04130	PWY-6004	glycine betaine biosynthesis V (from glycine)
CFF04554_RS04225	PWY-4983	L-citrulline-nitric oxide cycle
CFF04554_RS04225	PWY-4984	urea cycle
CFF04554_RS04225	PWY-5	canavanine biosynthesis
CFF04554_RS04225	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFF04554_RS04225	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFF04554_RS04240	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CFF04554_RS04240	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CFF04554_RS04240	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CFF04554_RS04240	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CFF04554_RS04285	PWY-6164	3-dehydroquinate biosynthesis I
CFF04554_RS04310	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFF04554_RS04320	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFF04554_RS04320	PWY-5723	Rubisco shunt
CFF04554_RS04395	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CFF04554_RS04395	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CFF04554_RS04395	PWY-6936	seleno-amino acid biosynthesis
CFF04554_RS04395	PWY-702	L-methionine biosynthesis II
CFF04554_RS04400	PWY-2201	folate transformations I
CFF04554_RS04400	PWY-3841	folate transformations II
CFF04554_RS04445	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFF04554_RS04445	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFF04554_RS04450	PWY-6823	molybdenum cofactor biosynthesis
CFF04554_RS04470	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFF04554_RS04470	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFF04554_RS04470	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS04470	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CFF04554_RS04470	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFF04554_RS04470	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFF04554_RS04480	PWY-40	putrescine biosynthesis I
CFF04554_RS04480	PWY-43	putrescine biosynthesis II
CFF04554_RS04480	PWY-6305	putrescine biosynthesis IV
CFF04554_RS04480	PWY-6834	spermidine biosynthesis III
CFF04554_RS04485	PWY-6936	seleno-amino acid biosynthesis
CFF04554_RS04485	PWY-7274	D-cycloserine biosynthesis
CFF04554_RS04550	PWY-5392	reductive TCA cycle II
CFF04554_RS04550	PWY-5537	pyruvate fermentation to acetate V
CFF04554_RS04550	PWY-5538	pyruvate fermentation to acetate VI
CFF04554_RS04550	PWY-5690	TCA cycle II (plants and fungi)
CFF04554_RS04550	PWY-5913	TCA cycle VI (obligate autotrophs)
CFF04554_RS04550	PWY-6728	methylaspartate cycle
CFF04554_RS04550	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFF04554_RS04550	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CFF04554_RS04555	PWY-5392	reductive TCA cycle II
CFF04554_RS04555	PWY-5537	pyruvate fermentation to acetate V
CFF04554_RS04555	PWY-5538	pyruvate fermentation to acetate VI
CFF04554_RS04555	PWY-5690	TCA cycle II (plants and fungi)
CFF04554_RS04555	PWY-5913	TCA cycle VI (obligate autotrophs)
CFF04554_RS04555	PWY-6728	methylaspartate cycle
CFF04554_RS04555	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFF04554_RS04555	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CFF04554_RS04565	PWY-5913	TCA cycle VI (obligate autotrophs)
CFF04554_RS04565	PWY-6549	L-glutamine biosynthesis III
CFF04554_RS04565	PWY-6728	methylaspartate cycle
CFF04554_RS04565	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFF04554_RS04565	PWY-7124	ethylene biosynthesis V (engineered)
CFF04554_RS04565	PWY-7254	TCA cycle VII (acetate-producers)
CFF04554_RS04565	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFF04554_RS04595	PWY-5344	L-homocysteine biosynthesis
CFF04554_RS04595	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
CFF04554_RS04605	PWY-6936	seleno-amino acid biosynthesis
CFF04554_RS04610	PWY-6012	acyl carrier protein metabolism I
CFF04554_RS04610	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CFF04554_RS04725	PWY-6123	inosine-5'-phosphate biosynthesis I
CFF04554_RS04725	PWY-6124	inosine-5'-phosphate biosynthesis II
CFF04554_RS04725	PWY-7234	inosine-5'-phosphate biosynthesis III
CFF04554_RS04730	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFF04554_RS04730	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFF04554_RS04730	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFF04554_RS04735	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFF04554_RS04735	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFF04554_RS04735	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFF04554_RS04745	PWY-5667	CDP-diacylglycerol biosynthesis I
CFF04554_RS04745	PWY-5981	CDP-diacylglycerol biosynthesis III
CFF04554_RS04745	PWY-6453	stigma estolide biosynthesis
CFF04554_RS04745	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CFF04554_RS04745	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
CFF04554_RS04745	PWY-7587	oleate biosynthesis III (cyanobacteria)
CFF04554_RS04745	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
CFF04554_RS04810	PWY-5392	reductive TCA cycle II
CFF04554_RS04810	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFF04554_RS04810	PWY-5690	TCA cycle II (plants and fungi)
CFF04554_RS04810	PWY-5913	TCA cycle VI (obligate autotrophs)
CFF04554_RS04810	PWY-6728	methylaspartate cycle
CFF04554_RS04810	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFF04554_RS04810	PWY-7254	TCA cycle VII (acetate-producers)
CFF04554_RS04810	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CFF04554_RS04830	PWY-6910	hydroxymethylpyrimidine salvage
CFF04554_RS04830	PWY-7356	thiamin salvage IV (yeast)
CFF04554_RS04830	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFF04554_RS04850	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFF04554_RS04885	PWY-6700	queuosine biosynthesis
CFF04554_RS04940	PWY-5747	2-methylcitrate cycle II
CFF04554_RS04950	PWY-6167	flavin biosynthesis II (archaea)
CFF04554_RS04950	PWY-6168	flavin biosynthesis III (fungi)
CFF04554_RS04950	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CFF04554_RS05055	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CFF04554_RS05130	PWY-6829	tRNA methylation (yeast)
CFF04554_RS05130	PWY-7285	methylwyosine biosynthesis
CFF04554_RS05130	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CFF04554_RS05170	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
CFF04554_RS05195	PWY-6123	inosine-5'-phosphate biosynthesis I
CFF04554_RS05195	PWY-7234	inosine-5'-phosphate biosynthesis III
CFF04554_RS05220	PWY-381	nitrate reduction II (assimilatory)
CFF04554_RS05220	PWY-5675	nitrate reduction V (assimilatory)
CFF04554_RS05220	PWY-6549	L-glutamine biosynthesis III
CFF04554_RS05220	PWY-6963	ammonia assimilation cycle I
CFF04554_RS05220	PWY-6964	ammonia assimilation cycle II
CFF04554_RS05345	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFF04554_RS05345	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFF04554_RS05355	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CFF04554_RS05435	PWY-5958	acridone alkaloid biosynthesis
CFF04554_RS05435	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CFF04554_RS05435	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CFF04554_RS05740	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CFF04554_RS05740	PWY-6167	flavin biosynthesis II (archaea)
CFF04554_RS05740	PWY-6168	flavin biosynthesis III (fungi)
CFF04554_RS05755	PWY-6614	tetrahydrofolate biosynthesis
CFF04554_RS05770	PWY-2941	L-lysine biosynthesis II
CFF04554_RS05770	PWY-2942	L-lysine biosynthesis III
CFF04554_RS05770	PWY-5097	L-lysine biosynthesis VI
CFF04554_RS05770	PWY-6559	spermidine biosynthesis II
CFF04554_RS05770	PWY-6562	norspermidine biosynthesis
CFF04554_RS05770	PWY-7153	grixazone biosynthesis
CFF04554_RS05795	PWY-6700	queuosine biosynthesis
CFF04554_RS05805	PWY-6825	phosphatidylcholine biosynthesis V
CFF04554_RS05825	PWY-5103	L-isoleucine biosynthesis III
CFF04554_RS05825	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFF04554_RS05880	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFF04554_RS05895	PWY-1622	formaldehyde assimilation I (serine pathway)
CFF04554_RS05895	PWY-181	photorespiration
CFF04554_RS05895	PWY-2161	folate polyglutamylation
CFF04554_RS05895	PWY-2201	folate transformations I
CFF04554_RS05895	PWY-3661	glycine betaine degradation I
CFF04554_RS05895	PWY-3661-1	glycine betaine degradation II (mammalian)
CFF04554_RS05895	PWY-3841	folate transformations II
CFF04554_RS05895	PWY-5497	purine nucleobases degradation II (anaerobic)
CFF04554_RS05940	PWY-3961	phosphopantothenate biosynthesis II
CFF04554_RS05960	PWY-5669	phosphatidylethanolamine biosynthesis I
CFF04554_RS06035	PWY-6605	adenine and adenosine salvage II
CFF04554_RS06035	PWY-6610	adenine and adenosine salvage IV
CFF04554_RS06060	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CFF04554_RS06060	PWY-2201	folate transformations I
CFF04554_RS06060	PWY-3841	folate transformations II
CFF04554_RS06060	PWY-5030	L-histidine degradation III
CFF04554_RS06060	PWY-5497	purine nucleobases degradation II (anaerobic)
CFF04554_RS06060	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CFF04554_RS06070	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFF04554_RS06130	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CFF04554_RS06130	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CFF04554_RS06165	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CFF04554_RS06165	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFF04554_RS06165	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CFF04554_RS06175	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS06240	PWY-723	alkylnitronates degradation
CFF04554_RS06360	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CFF04554_RS06360	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CFF04554_RS06360	PWY-6897	thiamin salvage II
CFF04554_RS06360	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CFF04554_RS06360	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CFF04554_RS06360	PWY-7356	thiamin salvage IV (yeast)
CFF04554_RS06360	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFF04554_RS06365	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CFF04554_RS06395	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
CFF04554_RS06395	PWY-6853	ethylene biosynthesis II (microbes)
CFF04554_RS06395	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CFF04554_RS06410	PWY-5674	nitrate reduction IV (dissimilatory)
CFF04554_RS06445	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFF04554_RS06490	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFF04554_RS06490	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFF04554_RS06490	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFF04554_RS06495	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFF04554_RS06495	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CFF04554_RS06505	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS06535	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CFF04554_RS06535	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CFF04554_RS06650	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFF04554_RS06650	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CFF04554_RS06655	PWY-4983	L-citrulline-nitric oxide cycle
CFF04554_RS06655	PWY-4984	urea cycle
CFF04554_RS06655	PWY-5	canavanine biosynthesis
CFF04554_RS06655	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFF04554_RS06655	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFF04554_RS06795	PWY-6854	ethylene biosynthesis III (microbes)
CFF04554_RS06805	PWY-5686	UMP biosynthesis
CFF04554_RS06815	PWY-6167	flavin biosynthesis II (archaea)
CFF04554_RS06815	PWY-6168	flavin biosynthesis III (fungi)
CFF04554_RS06830	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CFF04554_RS06830	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CFF04554_RS06845	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFF04554_RS06855	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CFF04554_RS06865	PWY-6871	3-methylbutanol biosynthesis
CFF04554_RS06870	PWY-5669	phosphatidylethanolamine biosynthesis I
CFF04554_RS06875	PWY-5669	phosphatidylethanolamine biosynthesis I
CFF04554_RS06930	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFF04554_RS06930	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFF04554_RS06935	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CFF04554_RS06935	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CFF04554_RS06935	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CFF04554_RS06940	PWY-1042	glycolysis IV (plant cytosol)
CFF04554_RS06940	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFF04554_RS06940	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFF04554_RS06940	PWY-5723	Rubisco shunt
CFF04554_RS06940	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFF04554_RS06940	PWY-6886	1-butanol autotrophic biosynthesis
CFF04554_RS06940	PWY-6901	superpathway of glucose and xylose degradation
CFF04554_RS06940	PWY-7003	glycerol degradation to butanol
CFF04554_RS06940	PWY-7124	ethylene biosynthesis V (engineered)
CFF04554_RS06940	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFF04554_RS06945	PWY-5367	petroselinate biosynthesis
CFF04554_RS06945	PWY-5515	L-arabinose degradation II
CFF04554_RS06945	PWY-5525	D-glucuronate degradation I
CFF04554_RS06945	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CFF04554_RS06945	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CFF04554_RS06945	PWY-5989	stearate biosynthesis II (bacteria and plants)
CFF04554_RS06945	PWY-5994	palmitate biosynthesis I (animals and fungi)
CFF04554_RS06945	PWY-6113	superpathway of mycolate biosynthesis
CFF04554_RS06945	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CFF04554_RS06945	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CFF04554_RS06945	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFF04554_RS06945	PWY-7663	gondoate biosynthesis (anaerobic)
CFF04554_RS06945	PWY-7664	oleate biosynthesis IV (anaerobic)
CFF04554_RS06945	PWYG-321	mycolate biosynthesis
CFF04554_RS06960	PWY-4381	fatty acid biosynthesis initiation I
CFF04554_RS06960	PWY-5743	3-hydroxypropanoate cycle
CFF04554_RS06960	PWY-5744	glyoxylate assimilation
CFF04554_RS06960	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CFF04554_RS06960	PWY-6679	jadomycin biosynthesis
CFF04554_RS06960	PWY-6722	candicidin biosynthesis
CFF04554_RS06960	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFF04554_RS07075	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
CFF04554_RS07080	PWY-3821	galactose degradation III
CFF04554_RS07080	PWY-6317	galactose degradation I (Leloir pathway)
CFF04554_RS07080	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CFF04554_RS07080	PWY-6527	stachyose degradation
CFF04554_RS07080	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CFF04554_RS07080	PWY-7344	UDP-D-galactose biosynthesis
CFF04554_RS07180	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
CFF04554_RS07235	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS07265	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CFF04554_RS07265	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CFF04554_RS07265	PWY-5989	stearate biosynthesis II (bacteria and plants)
CFF04554_RS07265	PWY-6113	superpathway of mycolate biosynthesis
CFF04554_RS07265	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CFF04554_RS07265	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CFF04554_RS07265	PWY-7663	gondoate biosynthesis (anaerobic)
CFF04554_RS07265	PWY-7664	oleate biosynthesis IV (anaerobic)
CFF04554_RS07265	PWYG-321	mycolate biosynthesis
CFF04554_RS07270	PWY-1042	glycolysis IV (plant cytosol)
CFF04554_RS07270	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFF04554_RS07270	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFF04554_RS07270	PWY-7003	glycerol degradation to butanol
CFF04554_RS07275	PWY-1042	glycolysis IV (plant cytosol)
CFF04554_RS07275	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFF04554_RS07275	PWY-6886	1-butanol autotrophic biosynthesis
CFF04554_RS07275	PWY-6901	superpathway of glucose and xylose degradation
CFF04554_RS07275	PWY-7003	glycerol degradation to butanol
CFF04554_RS07280	PWY-1042	glycolysis IV (plant cytosol)
CFF04554_RS07280	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFF04554_RS07280	PWY-6901	superpathway of glucose and xylose degradation
CFF04554_RS07280	PWY-7003	glycerol degradation to butanol
CFF04554_RS07285	PWY-5381	pyridine nucleotide cycling (plants)
CFF04554_RS07285	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CFF04554_RS07315	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS07360	PWY-6167	flavin biosynthesis II (archaea)
CFF04554_RS07360	PWY-6168	flavin biosynthesis III (fungi)
CFF04554_RS07360	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS07370	PWY-3781	aerobic respiration I (cytochrome c)
CFF04554_RS07370	PWY-6692	Fe(II) oxidation
CFF04554_RS07370	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
CFF04554_RS07370	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFF04554_RS07430	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CFF04554_RS07430	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CFF04554_RS07440	PWY-2941	L-lysine biosynthesis II
CFF04554_RS07440	PWY-2942	L-lysine biosynthesis III
CFF04554_RS07440	PWY-5097	L-lysine biosynthesis VI
CFF04554_RS07440	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFF04554_RS07440	PWY-6559	spermidine biosynthesis II
CFF04554_RS07440	PWY-6562	norspermidine biosynthesis
CFF04554_RS07440	PWY-7153	grixazone biosynthesis
CFF04554_RS07440	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFF04554_RS07520	PWY-5686	UMP biosynthesis
CFF04554_RS07525	PWY-5686	UMP biosynthesis
CFF04554_RS07575	PWY-5525	D-glucuronate degradation I
CFF04554_RS07610	PWY-702	L-methionine biosynthesis II
CFF04554_RS07620	PWY-2201	folate transformations I
CFF04554_RS07620	PWY-5497	purine nucleobases degradation II (anaerobic)
CFF04554_RS07635	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CFF04554_RS07660	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFF04554_RS07660	PWY-6416	quinate degradation II
CFF04554_RS07660	PWY-6707	gallate biosynthesis
CFF04554_RS07670	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CFF04554_RS07670	PWY-6148	tetrahydromethanopterin biosynthesis
CFF04554_RS07670	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CFF04554_RS07670	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CFF04554_RS07710	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CFF04554_RS07710	PWY-6153	autoinducer AI-2 biosynthesis I
CFF04554_RS07710	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CFF04554_RS07715	PWY-4381	fatty acid biosynthesis initiation I
CFF04554_RS07715	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CFF04554_RS07715	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFF04554_RS07760	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS07770	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS07810	PWY-3341	L-proline biosynthesis III
CFF04554_RS07810	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CFF04554_RS07880	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CFF04554_RS07880	PWY-6143	CMP-pseudaminate biosynthesis
CFF04554_RS07905	PWY-6143	CMP-pseudaminate biosynthesis
CFF04554_RS07915	PWY-7371	1,4-dihydroxy-6-naphthoate biosynthesis II
CFF04554_RS07915	PWY-7374	1,4-dihydroxy-6-naphthoate biosynthesis I
CFF04554_RS07920	PWY-7183	pyrimidine nucleobases salvage I
CFF04554_RS07935	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFF04554_RS07955	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS07970	PWY-3341	L-proline biosynthesis III
CFF04554_RS07970	PWY-4981	L-proline biosynthesis II (from arginine)
CFF04554_RS07970	PWY-6344	L-ornithine degradation II (Stickland reaction)
CFF04554_RS07990	PWY-4981	L-proline biosynthesis II (from arginine)
CFF04554_RS07990	PWY-4984	urea cycle
CFF04554_RS07990	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFF04554_RS07995	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFF04554_RS07995	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CFF04554_RS08000	PWY-6168	flavin biosynthesis III (fungi)
CFF04554_RS08000	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CFF04554_RS08025	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFF04554_RS08065	PWY-6891	thiazole biosynthesis II (Bacillus)
CFF04554_RS08065	PWY-6892	thiazole biosynthesis I (E. coli)
CFF04554_RS08065	PWY-7560	methylerythritol phosphate pathway II
CFF04554_RS08255	PWY-1042	glycolysis IV (plant cytosol)
CFF04554_RS08255	PWY-1622	formaldehyde assimilation I (serine pathway)
CFF04554_RS08255	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFF04554_RS08255	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFF04554_RS08255	PWY-5723	Rubisco shunt
CFF04554_RS08255	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFF04554_RS08255	PWY-6143	CMP-pseudaminate biosynthesis
CFF04554_RS08255	PWY-6886	1-butanol autotrophic biosynthesis
CFF04554_RS08255	PWY-6901	superpathway of glucose and xylose degradation
CFF04554_RS08255	PWY-7003	glycerol degradation to butanol
CFF04554_RS08255	PWY-7124	ethylene biosynthesis V (engineered)
CFF04554_RS08255	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFF04554_RS08255	PWY-7330	UDP-<i>N</i>-acetyl-&beta;-L-fucosamine biosynthesis
CFF04554_RS08255	PWY-7331	UDP-<i>N</i>-acetyl-&beta;-L-quinovosamine biosynthesis
CFF04554_RS08255	PWY-7332	superpathway of UDP-<I>N</i>-acetylglucosamine-derived O-antigen building blocks biosynthesis
CFF04554_RS08255	PWY-7719	CFF04554_RS08255
CFF04554_RS08305	PWY-5392	reductive TCA cycle II
CFF04554_RS08305	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFF04554_RS08305	PWY-5690	TCA cycle II (plants and fungi)
CFF04554_RS08305	PWY-5913	TCA cycle VI (obligate autotrophs)
CFF04554_RS08305	PWY-6728	methylaspartate cycle
CFF04554_RS08305	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFF04554_RS08305	PWY-7254	TCA cycle VII (acetate-producers)
CFF04554_RS08305	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CFF04554_RS08515	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFF04554_RS08515	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CFF04554_RS08520	PWY-6938	NADH repair
CFF04554_RS08550	PWY-5663	tetrahydrobiopterin biosynthesis I
CFF04554_RS08550	PWY-5664	tetrahydrobiopterin biosynthesis II
CFF04554_RS08550	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CFF04554_RS08550	PWY-6703	preQ<sub>0</sub> biosynthesis
CFF04554_RS08550	PWY-6983	tetrahydrobiopterin biosynthesis III
CFF04554_RS08550	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CFF04554_RS08555	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS08560	PWY-6823	molybdenum cofactor biosynthesis
CFF04554_RS08560	PWY-6891	thiazole biosynthesis II (Bacillus)
CFF04554_RS08560	PWY-6892	thiazole biosynthesis I (E. coli)
CFF04554_RS08560	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CFF04554_RS08655	PWY-6749	CMP-legionaminate biosynthesis I
CFF04554_RS08690	PWY-7039	phosphatidate metabolism, as a signaling molecule
CFF04554_RS08745	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CFF04554_RS08745	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFF04554_RS08745	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CFF04554_RS08745	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CFF04554_RS08765	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFF04554_RS08820	PWY-5101	L-isoleucine biosynthesis II
CFF04554_RS08820	PWY-5103	L-isoleucine biosynthesis III
CFF04554_RS08820	PWY-5104	L-isoleucine biosynthesis IV
CFF04554_RS08820	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFF04554_RS08830	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CFF04554_RS08830	PWY-7177	UTP and CTP dephosphorylation II
CFF04554_RS08830	PWY-7185	UTP and CTP dephosphorylation I
CFF04554_RS08850	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CFF04554_RS08850	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CFF04554_RS08905	PWY-2941	L-lysine biosynthesis II
CFF04554_RS08905	PWY-5097	L-lysine biosynthesis VI
CFF04554_RS08920	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFF04554_RS08920	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFF04554_RS08920	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFF04554_RS08950	PWY-5686	UMP biosynthesis
CFF04554_RS09030	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CFF04554_RS09030	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CFF04554_RS09030	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFF04554_RS09030	PWY-6936	seleno-amino acid biosynthesis
CFF04554_RS09030	PWY-702	L-methionine biosynthesis II
CFF04554_RS09040	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
CFF04554_RS09100	PWY-2201	folate transformations I
CFF04554_RS09115	PWY-6123	inosine-5'-phosphate biosynthesis I
CFF04554_RS09115	PWY-6124	inosine-5'-phosphate biosynthesis II
CFF04554_RS09115	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFF04554_RS09115	PWY-7234	inosine-5'-phosphate biosynthesis III
CFF04554_RS09120	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFF04554_RS09120	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFF04554_RS09120	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFF04554_RS09120	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFF04554_RS09120	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS09120	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFF04554_RS09120	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFF04554_RS09120	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
